Amet_3455 5f6e64c3b2fd4d30a28cdcf86e7974ab 361 SMART SM01329 4 354 2.1E-207 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amet_3455 5f6e64c3b2fd4d30a28cdcf86e7974ab 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 354 1.7E-138 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amet_3455 5f6e64c3b2fd4d30a28cdcf86e7974ab 361 Gene3D G3DSA:3.40.718.10 1 360 5.6E-148 T 12-10-2018 Amet_3455 5f6e64c3b2fd4d30a28cdcf86e7974ab 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Amet_3455 5f6e64c3b2fd4d30a28cdcf86e7974ab 361 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 358 51.361 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Amet_3455 5f6e64c3b2fd4d30a28cdcf86e7974ab 361 SUPERFAMILY SSF53659 2 358 2.52E-128 T 12-10-2018 Amet_3455 5f6e64c3b2fd4d30a28cdcf86e7974ab 361 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 353 2.1E-158 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Amet_4492 10be8214f147fd06393435e1505bef34 71 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 17 70 5.5E-17 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Amet_4492 10be8214f147fd06393435e1505bef34 71 Hamap MF_00422 Protein translocase subunit SecE [secE]. 14 69 11.912 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_4492 10be8214f147fd06393435e1505bef34 71 Gene3D G3DSA:1.20.5.1030 13 70 2.4E-19 T 12-10-2018 IPR038379 SecE superfamily Amet_4492 10be8214f147fd06393435e1505bef34 71 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 18 70 2.9E-18 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_4492 10be8214f147fd06393435e1505bef34 71 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 19 47 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 ProSitePatterns PS00674 AAA-protein family signature. 226 244 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 SUPERFAMILY SSF52540 85 350 1.82E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 Gene3D G3DSA:1.10.8.60 258 331 8.7E-26 T 12-10-2018 Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 49 509 2.2E-173 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 Pfam PF01434 Peptidase family M41 318 508 1.4E-59 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 126 255 1.5E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 SMART SM00382 122 258 6.9E-23 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 Gene3D G3DSA:1.20.58.760 332 518 5.2E-58 T 12-10-2018 Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 Gene3D G3DSA:3.40.50.300 76 257 1.1E-66 T 12-10-2018 Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 SUPERFAMILY SSF140990 341 516 2.49E-56 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Amet_1632 81dec93b08e7c6740f23bb824d14a2b0 526 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 525 30.652 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 Pfam PF04509 CheC-like family 131 164 1.8E-13 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 Pfam PF04509 CheC-like family 35 70 2.2E-12 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 SUPERFAMILY SSF101801 311 390 4.58E-22 T 12-10-2018 IPR036429 SpoA-like superfamily Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 315 384 5.5E-22 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 Gene3D G3DSA:2.30.330.10 301 393 1.6E-31 T 12-10-2018 IPR036429 SpoA-like superfamily Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 SUPERFAMILY SSF103039 31 224 3.92E-52 T 12-10-2018 IPR028976 CheC-like superfamily Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 Gene3D G3DSA:3.40.1550.10 30 228 1.2E-54 T 12-10-2018 IPR028976 CheC-like superfamily Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 PRINTS PR00956 Flagellar motor switch protein FliN signature 347 360 4.0E-24 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 PRINTS PR00956 Flagellar motor switch protein FliN signature 331 347 4.0E-24 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 PRINTS PR00956 Flagellar motor switch protein FliN signature 360 375 4.0E-24 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 PRINTS PR00956 Flagellar motor switch protein FliN signature 314 330 4.0E-24 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amet_2710 ff5d2017869f9733d8d5860dfb0fbb44 393 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 311 385 4.8E-29 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Amet_1369 6e4d639db120251ae66d0768211cfec8 284 Gene3D G3DSA:3.30.470.20 147 276 3.8E-6 T 12-10-2018 Amet_1369 6e4d639db120251ae66d0768211cfec8 284 Pfam PF14398 YheC/D like ATP-grasp 31 281 7.0E-60 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D Amet_1369 6e4d639db120251ae66d0768211cfec8 284 SUPERFAMILY SSF56059 38 253 2.65E-15 T 12-10-2018 Amet_2473 e39652196f8bb80992f1b8fe091f4c8b 561 Gene3D G3DSA:3.40.710.10 224 558 4.7E-95 T 12-10-2018 Amet_2473 e39652196f8bb80992f1b8fe091f4c8b 561 SUPERFAMILY SSF56601 227 557 4.61E-85 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_2473 e39652196f8bb80992f1b8fe091f4c8b 561 Pfam PF00905 Penicillin binding protein transpeptidase domain 246 554 4.2E-66 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amet_2473 e39652196f8bb80992f1b8fe091f4c8b 561 Gene3D G3DSA:3.90.1310.30 56 223 1.5E-17 T 12-10-2018 Amet_2473 e39652196f8bb80992f1b8fe091f4c8b 561 SUPERFAMILY SSF56519 56 211 1.26E-17 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 SUPERFAMILY SSF54862 515 590 3.87E-13 T 12-10-2018 Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 Pfam PF00037 4Fe-4S binding domain 569 590 3.5E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 Gene3D G3DSA:3.30.70.20 529 592 3.8E-9 T 12-10-2018 Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 PIRSF PIRSF006439 1 595 8.9E-248 T 12-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 182 9.7E-12 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 Gene3D G3DSA:3.40.50.970 1 182 2.3E-45 T 12-10-2018 Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 SUPERFAMILY SSF52518 346 531 2.21E-21 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 Gene3D G3DSA:3.40.50.970 359 528 2.7E-14 T 12-10-2018 Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 369 516 4.8E-19 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 SUPERFAMILY SSF52518 7 200 6.42E-47 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_1661 5cd3af6ee7dd819b332c06b660b2a599 595 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 574 585 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3555 2835ee26b845475d36e27ab5c2046566 322 Gene3D G3DSA:3.30.565.10 171 322 2.1E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3555 2835ee26b845475d36e27ab5c2046566 322 SMART SM00387 215 322 1.8E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3555 2835ee26b845475d36e27ab5c2046566 322 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 215 321 5.3E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3555 2835ee26b845475d36e27ab5c2046566 322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 304 2.7E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3555 2835ee26b845475d36e27ab5c2046566 322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 322 2.7E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3555 2835ee26b845475d36e27ab5c2046566 322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 280 2.7E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3555 2835ee26b845475d36e27ab5c2046566 322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 266 2.7E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3555 2835ee26b845475d36e27ab5c2046566 322 SUPERFAMILY SSF55874 174 322 2.75E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3555 2835ee26b845475d36e27ab5c2046566 322 Gene3D G3DSA:1.10.287.130 121 170 2.1E-28 T 12-10-2018 Amet_2968 2f637f32d313799ee4d0d66ff10cd5e5 246 Gene3D G3DSA:3.40.50.880 1 243 9.5E-64 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_2968 2f637f32d313799ee4d0d66ff10cd5e5 246 PRINTS PR00096 Glutamine amidotransferase superfamily signature 209 222 6.5E-5 T 12-10-2018 Amet_2968 2f637f32d313799ee4d0d66ff10cd5e5 246 PRINTS PR00096 Glutamine amidotransferase superfamily signature 111 122 6.5E-5 T 12-10-2018 Amet_2968 2f637f32d313799ee4d0d66ff10cd5e5 246 Pfam PF07722 Peptidase C26 3 215 5.0E-44 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 Amet_2968 2f637f32d313799ee4d0d66ff10cd5e5 246 SUPERFAMILY SSF52317 25 236 1.94E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_2968 2f637f32d313799ee4d0d66ff10cd5e5 246 PRINTS PR00097 Anthranilate synthase component II signature 209 222 2.0E-5 T 12-10-2018 Amet_2968 2f637f32d313799ee4d0d66ff10cd5e5 246 PRINTS PR00097 Anthranilate synthase component II signature 111 122 2.0E-5 T 12-10-2018 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Pfam PF00562 RNA polymerase Rpb2, domain 6 696 1082 1.5E-170 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Gene3D G3DSA:3.90.1100.10 373 602 7.3E-75 T 12-10-2018 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Gene3D G3DSA:2.40.50.150 804 943 8.5E-61 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Gene3D G3DSA:2.40.50.100 693 765 2.9E-31 T 12-10-2018 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Gene3D G3DSA:2.40.270.10 996 1060 5.8E-26 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1160 12.607 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 212 909 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Gene3D G3DSA:3.90.1800.10 1070 1126 2.1E-10 T 12-10-2018 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Gene3D G3DSA:2.40.270.10 766 803 1.3E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 ProSitePatterns PS01166 RNA polymerases beta chain signature. 935 947 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Gene3D G3DSA:3.90.1100.10 627 692 1.4E-19 T 12-10-2018 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Pfam PF10385 RNA polymerase beta subunit external 1 domain 567 635 1.3E-23 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Pfam PF04561 RNA polymerase Rpb2, domain 2 139 283 5.1E-22 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Pfam PF04561 RNA polymerase Rpb2, domain 2 397 430 2.9E-6 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Pfam PF04563 RNA polymerase beta subunit 47 475 1.1E-25 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 SUPERFAMILY SSF64484 12 1169 0.0 T 12-10-2018 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Pfam PF04560 RNA polymerase Rpb2, domain 7 1084 1159 1.7E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Pfam PF04565 RNA polymerase Rpb2, domain 3 489 557 5.2E-31 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4486 a36387df4357247591c7c99b93b77e91 1246 Gene3D G3DSA:3.90.1110.10 141 311 1.8E-58 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 Gene3D G3DSA:3.30.420.40 1 196 5.4E-81 T 12-10-2018 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 Hamap MF_00020 Acetate kinase [ackA]. 1 396 198.181 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 SUPERFAMILY SSF53067 159 395 2.96E-92 T 12-10-2018 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 PRINTS PR00471 Acetate kinase family signature 174 187 5.0E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 PRINTS PR00471 Acetate kinase family signature 204 225 5.0E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 PRINTS PR00471 Acetate kinase family signature 3 14 5.0E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 PRINTS PR00471 Acetate kinase family signature 377 389 5.0E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 PRINTS PR00471 Acetate kinase family signature 323 339 5.0E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 PRINTS PR00471 Acetate kinase family signature 301 314 5.0E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 TIGRFAM TIGR00016 ackA: acetate kinase 1 395 1.8E-163 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 SUPERFAMILY SSF53067 1 196 2.2E-73 T 12-10-2018 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 Gene3D G3DSA:3.30.420.40 197 396 6.7E-86 T 12-10-2018 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 PIRSF PIRSF000722 1 396 7.6E-159 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2763 26ba6b0f35c9ac110bc9ee0b5434ad3c 396 Pfam PF00871 Acetokinase family 2 390 3.5E-164 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_2470 b4cf99a6304f5043b9b598168c05c4e4 215 Gene3D G3DSA:3.40.50.150 3 215 3.5E-65 T 12-10-2018 Amet_2470 b4cf99a6304f5043b9b598168c05c4e4 215 SUPERFAMILY SSF53335 9 214 5.0E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2470 b4cf99a6304f5043b9b598168c05c4e4 215 Pfam PF01596 O-methyltransferase 20 213 6.6E-36 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 4.0E-91 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 SUPERFAMILY SSF54814 2 107 1.13E-34 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 ProSitePatterns PS00548 Ribosomal protein S3 signature. 164 198 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 SMART SM00322 61 126 3.8E-6 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 Gene3D G3DSA:3.30.1140.32 109 209 8.0E-41 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 207 38.143 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 SUPERFAMILY SSF54821 108 207 7.85E-38 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 Gene3D G3DSA:3.30.300.20 17 108 1.1E-27 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 Pfam PF07650 KH domain 39 111 7.1E-16 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4472 70ded0aed50a63a5a1bbd2fd4452695f 234 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 203 2.3E-39 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_0586 a42f310493744e63190e9e0d0e8da077 333 Gene3D G3DSA:3.40.50.2300 62 303 2.2E-96 T 12-10-2018 Amet_0586 a42f310493744e63190e9e0d0e8da077 333 SUPERFAMILY SSF53822 60 323 1.29E-65 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_0586 a42f310493744e63190e9e0d0e8da077 333 Gene3D G3DSA:3.40.50.2300 155 282 2.2E-96 T 12-10-2018 Amet_0586 a42f310493744e63190e9e0d0e8da077 333 Pfam PF13377 Periplasmic binding protein-like domain 164 322 7.8E-32 T 12-10-2018 Amet_0586 a42f310493744e63190e9e0d0e8da077 333 Gene3D G3DSA:1.10.260.40 1 60 1.5E-21 T 12-10-2018 Amet_0586 a42f310493744e63190e9e0d0e8da077 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.9E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_0586 a42f310493744e63190e9e0d0e8da077 333 SMART SM00354 1 71 4.8E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_0586 a42f310493744e63190e9e0d0e8da077 333 SUPERFAMILY SSF47413 1 59 8.84E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2065 9d07936381ad3fc9bff998254261e13d 325 SMART SM00382 44 236 2.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2065 9d07936381ad3fc9bff998254261e13d 325 SUPERFAMILY SSF52540 8 258 4.88E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2065 9d07936381ad3fc9bff998254261e13d 325 Gene3D G3DSA:3.40.50.300 6 325 2.9E-97 T 12-10-2018 Amet_2065 9d07936381ad3fc9bff998254261e13d 325 Pfam PF00005 ABC transporter 36 186 1.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2065 9d07936381ad3fc9bff998254261e13d 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 4.1E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2065 9d07936381ad3fc9bff998254261e13d 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 3.1E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2065 9d07936381ad3fc9bff998254261e13d 325 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1770 5d0074366f2ce26774ade7c031e510ec 234 SMART SM00448 4 114 1.8E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1770 5d0074366f2ce26774ade7c031e510ec 234 SUPERFAMILY SSF46894 131 232 1.1E-31 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_1770 5d0074366f2ce26774ade7c031e510ec 234 Pfam PF00072 Response regulator receiver domain 6 115 1.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1770 5d0074366f2ce26774ade7c031e510ec 234 SMART SM00862 155 231 1.8E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1770 5d0074366f2ce26774ade7c031e510ec 234 Gene3D G3DSA:1.10.10.10 133 234 2.2E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1770 5d0074366f2ce26774ade7c031e510ec 234 SUPERFAMILY SSF52172 3 131 1.2E-41 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1770 5d0074366f2ce26774ade7c031e510ec 234 Gene3D G3DSA:3.40.50.2300 2 132 8.7E-38 T 12-10-2018 Amet_1770 5d0074366f2ce26774ade7c031e510ec 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 1.7E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_2912 74dfd9bd2523375017ce6ed4f4f77533 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 1.8E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2912 74dfd9bd2523375017ce6ed4f4f77533 329 SMART SM00382 33 233 1.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2912 74dfd9bd2523375017ce6ed4f4f77533 329 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2912 74dfd9bd2523375017ce6ed4f4f77533 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 3.0E-28 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2912 74dfd9bd2523375017ce6ed4f4f77533 329 SUPERFAMILY SSF52540 4 253 1.5E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2912 74dfd9bd2523375017ce6ed4f4f77533 329 Pfam PF00005 ABC transporter 25 183 3.7E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2912 74dfd9bd2523375017ce6ed4f4f77533 329 Gene3D G3DSA:3.40.50.300 2 329 5.6E-101 T 12-10-2018 Amet_3545 c37ee57a130b1742c8284b620553b514 276 SUPERFAMILY SSF89550 2 264 9.94E-47 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amet_3545 c37ee57a130b1742c8284b620553b514 276 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 5 236 1.5E-43 T 12-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 Amet_3545 c37ee57a130b1742c8284b620553b514 276 Gene3D G3DSA:3.20.20.140 1 261 4.9E-65 T 12-10-2018 Amet_3545 c37ee57a130b1742c8284b620553b514 276 Pfam PF02811 PHP domain 5 194 2.8E-12 T 12-10-2018 IPR004013 PHP domain GO:0003824 Amet_3545 c37ee57a130b1742c8284b620553b514 276 SMART SM00481 4 85 2.9E-4 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Amet_4144 6062bd4f028c3e782872b9104250321d 91 Gene3D G3DSA:1.10.1220.10 1 88 9.6E-29 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Amet_4144 6062bd4f028c3e782872b9104250321d 91 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 42 5.1E-6 T 12-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Amet_4144 6062bd4f028c3e782872b9104250321d 91 SUPERFAMILY SSF47598 4 47 4.08E-9 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 SUPERFAMILY SSF55874 235 381 1.24E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 SUPERFAMILY SSF158472 111 159 2.09E-6 T 12-10-2018 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 Pfam PF00672 HAMP domain 110 158 3.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 SUPERFAMILY SSF47384 145 226 1.12E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 SMART SM00304 108 161 4.3E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 Gene3D G3DSA:1.10.287.130 112 230 6.0E-25 T 12-10-2018 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 SMART SM00388 162 229 7.9E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 Gene3D G3DSA:3.30.565.10 232 382 2.6E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 276 381 2.7E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 SMART SM00387 272 382 8.9E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 323 4.5E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 381 4.5E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 337 4.5E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 362 4.5E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4746 576b1c02ff135db862be8a0d93d82f2a 382 Pfam PF00512 His Kinase A (phospho-acceptor) domain 163 226 4.7E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4183 9c44dc51cf9af6519ef72d535aab14c1 387 Gene3D G3DSA:3.30.420.40 155 348 1.8E-126 T 12-10-2018 Amet_4183 9c44dc51cf9af6519ef72d535aab14c1 387 Gene3D G3DSA:3.30.420.40 20 383 1.8E-126 T 12-10-2018 Amet_4183 9c44dc51cf9af6519ef72d535aab14c1 387 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 13 387 34.73 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Amet_4183 9c44dc51cf9af6519ef72d535aab14c1 387 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 14 385 6.4E-98 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Amet_4183 9c44dc51cf9af6519ef72d535aab14c1 387 SUPERFAMILY SSF53067 15 361 1.1E-17 T 12-10-2018 Amet_4490 48f3f10c8044b529778e8c3996236f45 141 SMART SM00649 9 140 3.9E-83 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Amet_4490 48f3f10c8044b529778e8c3996236f45 141 SUPERFAMILY SSF46906 67 140 4.45E-26 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Amet_4490 48f3f10c8044b529778e8c3996236f45 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.3E-62 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4490 48f3f10c8044b529778e8c3996236f45 141 Gene3D G3DSA:1.10.10.250 72 140 1.8E-27 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Amet_4490 48f3f10c8044b529778e8c3996236f45 141 Gene3D G3DSA:3.30.1550.10 2 71 5.3E-35 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Amet_4490 48f3f10c8044b529778e8c3996236f45 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 2.1E-23 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Amet_4490 48f3f10c8044b529778e8c3996236f45 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.059 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Amet_4490 48f3f10c8044b529778e8c3996236f45 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 3.0E-31 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal Amet_4490 48f3f10c8044b529778e8c3996236f45 141 SUPERFAMILY SSF54747 3 72 5.49E-31 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Amet_4490 48f3f10c8044b529778e8c3996236f45 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-14 T 12-10-2018 Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 SUPERFAMILY SSF50249 2 62 6.28E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 SUPERFAMILY SSF47781 65 134 5.56E-18 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 Pfam PF07499 RuvA, C-terminal domain 150 192 2.4E-14 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 SUPERFAMILY SSF46929 149 193 2.09E-9 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 Pfam PF01330 RuvA N terminal domain 2 61 3.2E-16 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 4 190 2.7E-47 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 Gene3D G3DSA:2.40.50.140 1 64 6.4E-18 T 12-10-2018 Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 Pfam PF14520 Helix-hairpin-helix domain 71 129 2.5E-17 T 12-10-2018 Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 Gene3D G3DSA:1.10.150.20 65 136 6.2E-24 T 12-10-2018 Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 Gene3D G3DSA:1.10.8.10 145 192 4.6E-9 T 12-10-2018 Amet_2338 1edf02c2bb6a648bcbc05c1cb525ac80 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 28.03 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Amet_3682 fbf725f3bbfc1b19ddb55372a7a04cd9 315 SMART SM00729 24 252 1.4E-34 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_3682 fbf725f3bbfc1b19ddb55372a7a04cd9 315 Gene3D G3DSA:3.80.30.20 65 305 2.5E-14 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_3682 fbf725f3bbfc1b19ddb55372a7a04cd9 315 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 306 4.8E-93 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 Amet_3682 fbf725f3bbfc1b19ddb55372a7a04cd9 315 Pfam PF16199 Radical_SAM C-terminal domain 213 294 9.4E-19 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Amet_3682 fbf725f3bbfc1b19ddb55372a7a04cd9 315 SUPERFAMILY SSF102114 7 293 7.46E-46 T 12-10-2018 Amet_3682 fbf725f3bbfc1b19ddb55372a7a04cd9 315 Pfam PF04055 Radical SAM superfamily 45 204 7.0E-9 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_1194 39abf5a89cb84c11bf666b3cff68d8c7 390 Gene3D G3DSA:3.40.350.10 1 156 1.1E-32 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amet_1194 39abf5a89cb84c11bf666b3cff68d8c7 390 SUPERFAMILY SSF53092 1 156 1.64E-35 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amet_1194 39abf5a89cb84c11bf666b3cff68d8c7 390 Pfam PF00557 Metallopeptidase family M24 165 374 3.1E-34 T 12-10-2018 IPR000994 Peptidase M24 Amet_1194 39abf5a89cb84c11bf666b3cff68d8c7 390 Pfam PF01321 Creatinase/Prolidase N-terminal domain 12 158 1.7E-20 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Amet_1194 39abf5a89cb84c11bf666b3cff68d8c7 390 SUPERFAMILY SSF55920 158 389 2.09E-57 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like Amet_1194 39abf5a89cb84c11bf666b3cff68d8c7 390 Gene3D G3DSA:3.90.230.10 157 388 8.7E-46 T 12-10-2018 Amet_4792 1c94e00653405044ebe20588f3bbcb0b 257 Gene3D G3DSA:3.40.50.300 1 254 5.9E-84 T 12-10-2018 Amet_4792 1c94e00653405044ebe20588f3bbcb0b 257 Pfam PF13614 AAA domain 2 178 8.9E-72 T 12-10-2018 IPR025669 AAA domain Amet_4792 1c94e00653405044ebe20588f3bbcb0b 257 SUPERFAMILY SSF52540 2 252 2.38E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4792 1c94e00653405044ebe20588f3bbcb0b 257 PIRSF PIRSF009320 88 252 1.4E-5 T 12-10-2018 Amet_4792 1c94e00653405044ebe20588f3bbcb0b 257 PIRSF PIRSF009320 2 85 3.3E-15 T 12-10-2018 Amet_2879 76442d3d4c3fd4ea9611dcea30804fa5 366 Gene3D G3DSA:3.40.50.2000 4 354 2.1E-109 T 12-10-2018 Amet_2879 76442d3d4c3fd4ea9611dcea30804fa5 366 SUPERFAMILY SSF53756 1 364 1.8E-103 T 12-10-2018 Amet_2879 76442d3d4c3fd4ea9611dcea30804fa5 366 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 142 1.1E-39 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2879 76442d3d4c3fd4ea9611dcea30804fa5 366 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 358 5.9E-92 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2879 76442d3d4c3fd4ea9611dcea30804fa5 366 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 364 32.635 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2879 76442d3d4c3fd4ea9611dcea30804fa5 366 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 190 354 8.1E-38 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Amet_2879 76442d3d4c3fd4ea9611dcea30804fa5 366 Gene3D G3DSA:3.40.50.2000 165 348 2.1E-109 T 12-10-2018 Amet_0136 cf1d7ace823d4476e72e3bb246c2816f 343 Pfam PF06725 3D domain 277 343 3.1E-21 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Amet_0136 cf1d7ace823d4476e72e3bb246c2816f 343 SMART SM01208 148 226 4.8E-24 T 12-10-2018 IPR011098 G5 domain Amet_0136 cf1d7ace823d4476e72e3bb246c2816f 343 Gene3D G3DSA:2.40.40.10 241 339 2.7E-6 T 12-10-2018 IPR036908 RlpA-like domain superfamily Amet_0136 cf1d7ace823d4476e72e3bb246c2816f 343 SUPERFAMILY SSF50685 278 331 1.22E-10 T 12-10-2018 IPR036908 RlpA-like domain superfamily Amet_0136 cf1d7ace823d4476e72e3bb246c2816f 343 Pfam PF03990 Domain of unknown function (DUF348) 97 134 1.7E-6 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Amet_0136 cf1d7ace823d4476e72e3bb246c2816f 343 Pfam PF03990 Domain of unknown function (DUF348) 38 77 8.3E-9 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Amet_0136 cf1d7ace823d4476e72e3bb246c2816f 343 Pfam PF07501 G5 domain 154 224 9.7E-19 T 12-10-2018 IPR011098 G5 domain Amet_0136 cf1d7ace823d4476e72e3bb246c2816f 343 Gene3D G3DSA:2.20.230.10 126 225 1.1E-17 T 12-10-2018 Amet_2045 8e064f380898a4b855329c5a00bc200d 507 Gene3D G3DSA:3.40.190.10 69 489 1.5E-88 T 12-10-2018 Amet_2045 8e064f380898a4b855329c5a00bc200d 507 SUPERFAMILY SSF53850 32 498 3.01E-87 T 12-10-2018 Amet_2045 8e064f380898a4b855329c5a00bc200d 507 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 425 3.1E-62 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_2045 8e064f380898a4b855329c5a00bc200d 507 PIRSF PIRSF002741 1 506 7.0E-64 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_2045 8e064f380898a4b855329c5a00bc200d 507 Gene3D G3DSA:3.10.105.10 261 477 1.5E-88 T 12-10-2018 Amet_1936 7ebea4afd5c3999233d9368a0c996b04 215 Pfam PF13384 Homeodomain-like domain 168 204 1.7E-7 T 12-10-2018 Amet_1936 7ebea4afd5c3999233d9368a0c996b04 215 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 57 70 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_1936 7ebea4afd5c3999233d9368a0c996b04 215 SUPERFAMILY SSF88946 7 99 2.2E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1936 7ebea4afd5c3999233d9368a0c996b04 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 211 9.8E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_1936 7ebea4afd5c3999233d9368a0c996b04 215 Gene3D G3DSA:1.20.120.1810 2 96 2.0E-20 T 12-10-2018 Amet_1936 7ebea4afd5c3999233d9368a0c996b04 215 SUPERFAMILY SSF88659 135 213 3.66E-7 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_1936 7ebea4afd5c3999233d9368a0c996b04 215 Gene3D G3DSA:1.20.140.160 97 214 1.5E-6 T 12-10-2018 Amet_1936 7ebea4afd5c3999233d9368a0c996b04 215 Pfam PF04542 Sigma-70 region 2 35 101 2.3E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1936 7ebea4afd5c3999233d9368a0c996b04 215 PIRSF PIRSF000770 1 215 3.5E-58 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_4384 7ebea4afd5c3999233d9368a0c996b04 215 Pfam PF13384 Homeodomain-like domain 168 204 1.7E-7 T 12-10-2018 Amet_4384 7ebea4afd5c3999233d9368a0c996b04 215 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 57 70 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_4384 7ebea4afd5c3999233d9368a0c996b04 215 SUPERFAMILY SSF88946 7 99 2.2E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4384 7ebea4afd5c3999233d9368a0c996b04 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 211 9.8E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_4384 7ebea4afd5c3999233d9368a0c996b04 215 Gene3D G3DSA:1.20.120.1810 2 96 2.0E-20 T 12-10-2018 Amet_4384 7ebea4afd5c3999233d9368a0c996b04 215 SUPERFAMILY SSF88659 135 213 3.66E-7 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_4384 7ebea4afd5c3999233d9368a0c996b04 215 Gene3D G3DSA:1.20.140.160 97 214 1.5E-6 T 12-10-2018 Amet_4384 7ebea4afd5c3999233d9368a0c996b04 215 Pfam PF04542 Sigma-70 region 2 35 101 2.3E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4384 7ebea4afd5c3999233d9368a0c996b04 215 PIRSF PIRSF000770 1 215 3.5E-58 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2927 55fa2e2085e9ab7af5c62be3cab8ae19 187 Gene3D G3DSA:1.10.10.10 118 182 7.2E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2927 55fa2e2085e9ab7af5c62be3cab8ae19 187 SUPERFAMILY SSF88946 8 104 4.4E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2927 55fa2e2085e9ab7af5c62be3cab8ae19 187 Pfam PF04542 Sigma-70 region 2 28 94 1.1E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2927 55fa2e2085e9ab7af5c62be3cab8ae19 187 Pfam PF08281 Sigma-70, region 4 125 175 5.6E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2927 55fa2e2085e9ab7af5c62be3cab8ae19 187 Gene3D G3DSA:1.10.1740.10 5 117 2.3E-25 T 12-10-2018 Amet_2927 55fa2e2085e9ab7af5c62be3cab8ae19 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 50 81 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2927 55fa2e2085e9ab7af5c62be3cab8ae19 187 SUPERFAMILY SSF88659 123 180 8.97E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2927 55fa2e2085e9ab7af5c62be3cab8ae19 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 179 5.8E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_0195 d5032d9c35eb84b4e9600f5a6af1e7fa 133 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 12 130 7.4E-34 T 12-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Amet_0195 d5032d9c35eb84b4e9600f5a6af1e7fa 133 SUPERFAMILY SSF81593 7 128 3.3E-42 T 12-10-2018 Amet_0195 d5032d9c35eb84b4e9600f5a6af1e7fa 133 Gene3D G3DSA:1.20.120.330 14 132 3.9E-38 T 12-10-2018 Amet_0195 d5032d9c35eb84b4e9600f5a6af1e7fa 133 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 11 130 3.3E-42 T 12-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Amet_3162 a97b98b9ac0bf99f57f174577bda8c55 279 SUPERFAMILY SSF89550 12 275 2.62E-44 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amet_3162 a97b98b9ac0bf99f57f174577bda8c55 279 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 13 251 6.4E-57 T 12-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 Amet_3162 a97b98b9ac0bf99f57f174577bda8c55 279 Gene3D G3DSA:3.20.20.140 10 270 1.2E-72 T 12-10-2018 Amet_3162 a97b98b9ac0bf99f57f174577bda8c55 279 Pfam PF02811 PHP domain 14 204 5.9E-16 T 12-10-2018 IPR004013 PHP domain GO:0003824 Amet_2911 39ea1d8a0ab160a8c6924aa5da56b641 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 311 3.9E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2911 39ea1d8a0ab160a8c6924aa5da56b641 332 Gene3D G3DSA:3.40.50.300 14 332 9.3E-103 T 12-10-2018 Amet_2911 39ea1d8a0ab160a8c6924aa5da56b641 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 245 331 8.5E-29 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2911 39ea1d8a0ab160a8c6924aa5da56b641 332 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2911 39ea1d8a0ab160a8c6924aa5da56b641 332 SUPERFAMILY SSF52540 16 266 1.15E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2911 39ea1d8a0ab160a8c6924aa5da56b641 332 Pfam PF00005 ABC transporter 44 194 4.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2911 39ea1d8a0ab160a8c6924aa5da56b641 332 SMART SM00382 52 244 4.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0312 edd706c73147352b5bbba5b5192c5f3b 384 Gene3D G3DSA:2.40.30.170 51 325 7.3E-65 T 12-10-2018 Amet_0312 edd706c73147352b5bbba5b5192c5f3b 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 315 1.1E-20 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Amet_0312 edd706c73147352b5bbba5b5192c5f3b 384 Gene3D G3DSA:2.40.420.20 50 384 7.3E-65 T 12-10-2018 Amet_0312 edd706c73147352b5bbba5b5192c5f3b 384 SUPERFAMILY SSF111369 53 322 2.22E-20 T 12-10-2018 Amet_0312 edd706c73147352b5bbba5b5192c5f3b 384 Gene3D G3DSA:2.40.50.100 62 249 7.3E-65 T 12-10-2018 Amet_0312 edd706c73147352b5bbba5b5192c5f3b 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 176 384 4.0E-42 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Amet_0312 edd706c73147352b5bbba5b5192c5f3b 384 Gene3D G3DSA:1.10.287.470 96 214 7.3E-65 T 12-10-2018 Amet_2283 30d234cb5626362415638cd3940cc7f9 209 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 5 193 1.9E-79 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Amet_2283 30d234cb5626362415638cd3940cc7f9 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 185 2.0E-67 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Amet_2283 30d234cb5626362415638cd3940cc7f9 209 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 3 196 26.233 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Amet_2283 30d234cb5626362415638cd3940cc7f9 209 PIRSF PIRSF006102 1 205 1.0E-74 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 PRINTS PR01034 Ribosomal protein S12 signature 90 107 1.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 PRINTS PR01034 Ribosomal protein S12 signature 40 55 1.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 PRINTS PR01034 Ribosomal protein S12 signature 55 70 1.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 PRINTS PR01034 Ribosomal protein S12 signature 107 123 1.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 PRINTS PR01034 Ribosomal protein S12 signature 71 90 1.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 PRINTS PR01034 Ribosomal protein S12 signature 123 135 1.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.966 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 Gene3D G3DSA:2.40.50.140 1 139 7.7E-61 T 12-10-2018 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 PIRSF PIRSF002133 1 137 1.0E-48 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 136 6.8E-67 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 Pfam PF00164 Ribosomal protein S12/S23 32 136 1.1E-38 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4483 0f3d432e7aae16da9ea0cc8a66ae1bdc 139 SUPERFAMILY SSF50249 2 137 1.37E-48 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_3646 f89df6612cfe50e90a27170a36d6a352 414 SUPERFAMILY SSF53720 7 413 8.38E-108 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amet_3646 f89df6612cfe50e90a27170a36d6a352 414 PIRSF PIRSF000151 1 414 4.6E-171 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Amet_3646 f89df6612cfe50e90a27170a36d6a352 414 Gene3D G3DSA:3.40.309.10 225 371 1.3E-158 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amet_3646 f89df6612cfe50e90a27170a36d6a352 414 Pfam PF00171 Aldehyde dehydrogenase family 314 403 2.4E-7 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amet_3646 f89df6612cfe50e90a27170a36d6a352 414 Pfam PF00171 Aldehyde dehydrogenase family 13 280 2.3E-13 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amet_3646 f89df6612cfe50e90a27170a36d6a352 414 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 320 341 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amet_3646 f89df6612cfe50e90a27170a36d6a352 414 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 13 403 3.4E-148 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amet_3646 f89df6612cfe50e90a27170a36d6a352 414 Gene3D G3DSA:3.40.605.10 17 408 1.3E-158 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amet_3646 f89df6612cfe50e90a27170a36d6a352 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 4 413 38.957 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amet_2817 d1f38cc4b13b3dbcce85f03c0fe60a76 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 495 7.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2817 d1f38cc4b13b3dbcce85f03c0fe60a76 503 SMART SM00304 206 259 2.3E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2817 d1f38cc4b13b3dbcce85f03c0fe60a76 503 SUPERFAMILY SSF55874 342 494 1.96E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2817 d1f38cc4b13b3dbcce85f03c0fe60a76 503 Gene3D G3DSA:1.20.1480.50 168 265 1.6E-16 T 12-10-2018 Amet_2817 d1f38cc4b13b3dbcce85f03c0fe60a76 503 Pfam PF06580 Histidine kinase 288 367 6.5E-25 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Amet_2817 d1f38cc4b13b3dbcce85f03c0fe60a76 503 Pfam PF00672 HAMP domain 207 255 2.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2817 d1f38cc4b13b3dbcce85f03c0fe60a76 503 SUPERFAMILY SSF158472 206 257 3.53E-10 T 12-10-2018 Amet_2817 d1f38cc4b13b3dbcce85f03c0fe60a76 503 Gene3D G3DSA:3.30.565.10 350 496 1.0E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2648 0ee37a1907242130308eea5292112004 137 Gene3D G3DSA:3.30.360.110 3 64 6.2E-28 T 12-10-2018 Amet_2648 0ee37a1907242130308eea5292112004 137 SUPERFAMILY SSF56276 5 117 1.94E-43 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Amet_2648 0ee37a1907242130308eea5292112004 137 Pfam PF02675 S-adenosylmethionine decarboxylase 9 115 2.3E-42 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amet_2648 0ee37a1907242130308eea5292112004 137 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 5 115 5.7E-47 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amet_2648 0ee37a1907242130308eea5292112004 137 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 3 119 33.105 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amet_2648 0ee37a1907242130308eea5292112004 137 Gene3D G3DSA:3.30.160.750 65 132 2.1E-25 T 12-10-2018 Amet_3739 4f7cf1ede100c45844c808b8d373fddb 63 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 3 62 2.2E-32 T 12-10-2018 IPR019240 Protein of unknown function DUF2196 Amet_3739 4f7cf1ede100c45844c808b8d373fddb 63 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 3 62 3.7E-28 T 12-10-2018 IPR019240 Protein of unknown function DUF2196 Amet_4461 e9579f797c148f923e06c7986ea8b85b 169 SUPERFAMILY SSF54211 83 162 5.56E-26 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_4461 e9579f797c148f923e06c7986ea8b85b 169 ProSitePatterns PS00585 Ribosomal protein S5 signature. 31 63 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Amet_4461 e9579f797c148f923e06c7986ea8b85b 169 Pfam PF03719 Ribosomal protein S5, C-terminal domain 90 160 1.0E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Amet_4461 e9579f797c148f923e06c7986ea8b85b 169 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 166 34.309 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amet_4461 e9579f797c148f923e06c7986ea8b85b 169 Gene3D G3DSA:3.30.160.20 4 75 4.7E-31 T 12-10-2018 Amet_4461 e9579f797c148f923e06c7986ea8b85b 169 Pfam PF00333 Ribosomal protein S5, N-terminal domain 15 78 5.6E-29 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Amet_4461 e9579f797c148f923e06c7986ea8b85b 169 SUPERFAMILY SSF54768 10 78 2.41E-22 T 12-10-2018 Amet_4461 e9579f797c148f923e06c7986ea8b85b 169 Gene3D G3DSA:3.30.230.10 77 169 1.1E-34 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_4461 e9579f797c148f923e06c7986ea8b85b 169 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 13 166 3.7E-66 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amet_2294 7c6ecfc347d5afabb2d94df24ed6c90b 210 SUPERFAMILY SSF63848 102 206 4.32E-33 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Amet_2294 7c6ecfc347d5afabb2d94df24ed6c90b 210 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 6 207 21.202 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Amet_2294 7c6ecfc347d5afabb2d94df24ed6c90b 210 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 205 1.8E-29 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Amet_2294 7c6ecfc347d5afabb2d94df24ed6c90b 210 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 104 203 4.6E-32 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Amet_2294 7c6ecfc347d5afabb2d94df24ed6c90b 210 Gene3D G3DSA:2.160.20.70 98 210 3.6E-40 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Amet_1666 504f2b34217b744003fe4cb4c55f0203 222 Pfam PF01930 Domain of unknown function DUF83 13 201 4.7E-37 T 12-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 Amet_1666 504f2b34217b744003fe4cb4c55f0203 222 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 13 201 1.2E-37 T 12-10-2018 IPR013343 CRISPR-associated protein Cas4 Amet_1666 504f2b34217b744003fe4cb4c55f0203 222 Gene3D G3DSA:3.90.320.10 8 203 4.6E-10 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Amet_1023 75dc6b7cea189a4f9996ed347f34eed0 230 SUPERFAMILY SSF161098 18 226 7.06E-37 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1023 75dc6b7cea189a4f9996ed347f34eed0 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 223 4.6E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1023 75dc6b7cea189a4f9996ed347f34eed0 230 Gene3D G3DSA:1.10.3720.10 5 230 2.5E-34 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1671 d8e80e44fe7235e5d963dc3ba099c219 1631 Pfam PF01467 Cytidylyltransferase-like 927 1091 1.4E-4 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amet_1671 d8e80e44fe7235e5d963dc3ba099c219 1631 SUPERFAMILY SSF52374 923 1123 7.04E-22 T 12-10-2018 Amet_1671 d8e80e44fe7235e5d963dc3ba099c219 1631 SUPERFAMILY SSF109604 165 316 2.51E-9 T 12-10-2018 Amet_1671 d8e80e44fe7235e5d963dc3ba099c219 1631 SUPERFAMILY SSF48371 396 889 3.39E-10 T 12-10-2018 IPR016024 Armadillo-type fold Amet_3367 7064c72bd6962a6d5909a1c88228880e 172 SUPERFAMILY SSF55729 1 146 2.33E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_3367 7064c72bd6962a6d5909a1c88228880e 172 Gene3D G3DSA:3.40.630.30 1 172 1.2E-35 T 12-10-2018 Amet_3367 7064c72bd6962a6d5909a1c88228880e 172 Pfam PF13527 Acetyltransferase (GNAT) domain 3 133 6.0E-17 T 12-10-2018 Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 Gene3D G3DSA:3.10.350.10 77 134 9.7E-15 T 12-10-2018 IPR036779 LysM domain superfamily Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 Gene3D G3DSA:3.10.350.10 19 76 7.2E-13 T 12-10-2018 IPR036779 LysM domain superfamily Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 Pfam PF01476 LysM domain 80 123 6.9E-10 T 12-10-2018 IPR018392 LysM domain Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 Pfam PF01476 LysM domain 28 72 2.3E-9 T 12-10-2018 IPR018392 LysM domain Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 SUPERFAMILY SSF54106 26 72 2.35E-8 T 12-10-2018 Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 SMART SM00257 27 72 1.7E-10 T 12-10-2018 IPR018392 LysM domain Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 SMART SM00257 79 123 3.6E-10 T 12-10-2018 IPR018392 LysM domain Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 Pfam PF01522 Polysaccharide deacetylase 162 283 1.2E-38 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 Gene3D G3DSA:3.20.20.370 149 360 3.1E-79 T 12-10-2018 Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 SUPERFAMILY SSF54106 79 123 2.49E-10 T 12-10-2018 Amet_4252 e7a29fb06caeb9e42e60e27431228f86 361 SUPERFAMILY SSF88713 157 357 4.23E-70 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amet_2956 f3a34b61f9fe68289912bb8056354bb9 360 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 183 327 3.0E-40 T 12-10-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 Amet_2956 f3a34b61f9fe68289912bb8056354bb9 360 Gene3D G3DSA:3.40.50.720 1 191 1.8E-55 T 12-10-2018 Amet_2956 f3a34b61f9fe68289912bb8056354bb9 360 SUPERFAMILY SSF51735 1 103 6.51E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2956 f3a34b61f9fe68289912bb8056354bb9 360 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 101 1.8E-12 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2956 f3a34b61f9fe68289912bb8056354bb9 360 Gene3D G3DSA:1.10.1040.10 193 344 4.7E-51 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amet_2956 f3a34b61f9fe68289912bb8056354bb9 360 SUPERFAMILY SSF48179 186 343 7.82E-36 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_0795 2fbab9a62067e285395bc57f50364603 292 Gene3D G3DSA:2.170.280.10 185 199 9.6E-18 T 12-10-2018 Amet_0795 2fbab9a62067e285395bc57f50364603 292 SUPERFAMILY SSF64518 1 291 1.57E-86 T 12-10-2018 Amet_0795 2fbab9a62067e285395bc57f50364603 292 Pfam PF00700 Bacterial flagellin C-terminal helical region 206 291 3.0E-29 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amet_0795 2fbab9a62067e285395bc57f50364603 292 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 137 7.2E-40 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amet_0795 2fbab9a62067e285395bc57f50364603 292 Gene3D G3DSA:1.20.1330.10 200 243 9.6E-18 T 12-10-2018 Amet_0795 2fbab9a62067e285395bc57f50364603 292 Gene3D G3DSA:1.20.1330.10 43 169 9.3E-60 T 12-10-2018 Amet_0795 2fbab9a62067e285395bc57f50364603 292 PRINTS PR00207 Flagellin signature 35 52 4.6E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Amet_0795 2fbab9a62067e285395bc57f50364603 292 PRINTS PR00207 Flagellin signature 109 132 4.6E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Amet_0795 2fbab9a62067e285395bc57f50364603 292 PRINTS PR00207 Flagellin signature 74 93 4.6E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Amet_0795 2fbab9a62067e285395bc57f50364603 292 Gene3D G3DSA:1.20.58.1830 3 31 9.3E-60 T 12-10-2018 Amet_0795 2fbab9a62067e285395bc57f50364603 292 Gene3D G3DSA:1.10.8.410 244 291 1.7E-24 T 12-10-2018 Amet_3837 63298885d74b67698a39e62172c2356a 100 SMART SM00877 5 82 4.6E-32 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3837 63298885d74b67698a39e62172c2356a 100 Pfam PF00936 BMC domain 6 82 1.8E-24 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3837 63298885d74b67698a39e62172c2356a 100 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 5 64 3.0E-27 T 12-10-2018 Amet_3837 63298885d74b67698a39e62172c2356a 100 SUPERFAMILY SSF143414 4 93 1.96E-29 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_3837 63298885d74b67698a39e62172c2356a 100 Gene3D G3DSA:3.30.70.1710 1 99 5.1E-35 T 12-10-2018 Amet_1022 b1a44b63020d76990d4f2a4026902839 287 Gene3D G3DSA:3.40.190.10 44 270 1.5E-84 T 12-10-2018 Amet_1022 b1a44b63020d76990d4f2a4026902839 287 SUPERFAMILY SSF53850 42 274 1.28E-31 T 12-10-2018 Amet_1022 b1a44b63020d76990d4f2a4026902839 287 Gene3D G3DSA:3.40.190.10 119 233 1.5E-84 T 12-10-2018 Amet_1022 b1a44b63020d76990d4f2a4026902839 287 Pfam PF12849 PBP superfamily domain 35 263 3.5E-28 T 12-10-2018 IPR024370 PBP domain Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SMART SM00060 1885 1966 0.0024 T 12-10-2018 IPR003961 Fibronectin type III GO:0005515 Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SUPERFAMILY SSF81296 1023 1122 8.4E-6 T 12-10-2018 IPR014756 Immunoglobulin E-set Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SUPERFAMILY SSF81296 699 775 2.8E-8 T 12-10-2018 IPR014756 Immunoglobulin E-set Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 Gene3D G3DSA:2.60.40.10 1883 1984 1.4E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SUPERFAMILY SSF81296 1664 1756 4.76E-9 T 12-10-2018 IPR014756 Immunoglobulin E-set Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SMART SM00429 1664 1758 0.47 T 12-10-2018 IPR002909 IPT domain Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SMART SM00429 699 781 0.14 T 12-10-2018 IPR002909 IPT domain Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SMART SM00429 1023 1123 6.3E-5 T 12-10-2018 IPR002909 IPT domain Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SMART SM00429 1316 1531 2.6 T 12-10-2018 IPR002909 IPT domain Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SUPERFAMILY SSF81296 1317 1525 3.87E-5 T 12-10-2018 IPR014756 Immunoglobulin E-set Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 Gene3D G3DSA:2.60.40.10 698 784 2.1E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 Pfam PF01833 IPT/TIG domain 1665 1746 1.0E-6 T 12-10-2018 IPR002909 IPT domain Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 Pfam PF01833 IPT/TIG domain 1024 1108 6.1E-5 T 12-10-2018 IPR002909 IPT domain Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 Pfam PF01833 IPT/TIG domain 700 776 7.1E-10 T 12-10-2018 IPR002909 IPT domain Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SUPERFAMILY SSF81296 1128 1313 2.02E-7 T 12-10-2018 IPR014756 Immunoglobulin E-set Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 SUPERFAMILY SSF49265 1882 1978 1.51E-9 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 Gene3D G3DSA:2.60.40.10 1019 1127 4.8E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_0180 4c3adc5f64968ca1b49e2f88978a2a41 2199 Gene3D G3DSA:2.60.40.10 1660 1771 1.4E-16 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_3678 2e70f43b4cd9e28ff5ed51c5f64a5de4 267 SMART SM00954 45 168 1.5E-36 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Amet_3678 2e70f43b4cd9e28ff5ed51c5f64a5de4 267 SUPERFAMILY SSF81301 3 201 8.34E-54 T 12-10-2018 Amet_3678 2e70f43b4cd9e28ff5ed51c5f64a5de4 267 Gene3D G3DSA:1.10.287.860 151 213 1.1E-24 T 12-10-2018 Amet_3678 2e70f43b4cd9e28ff5ed51c5f64a5de4 267 Pfam PF04607 Region found in RelA / SpoT proteins 45 166 5.3E-33 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Amet_3678 2e70f43b4cd9e28ff5ed51c5f64a5de4 267 Gene3D G3DSA:3.30.460.10 1 149 4.6E-47 T 12-10-2018 Amet_4248 526a73043813f32ba530d54907cef3e3 470 Gene3D G3DSA:3.30.450.20 14 124 2.6E-12 T 12-10-2018 Amet_4248 526a73043813f32ba530d54907cef3e3 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 375 384 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_4248 526a73043813f32ba530d54907cef3e3 470 SMART SM00382 181 325 5.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4248 526a73043813f32ba530d54907cef3e3 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 3.9E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4248 526a73043813f32ba530d54907cef3e3 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 3.9E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4248 526a73043813f32ba530d54907cef3e3 470 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 4.7E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4248 526a73043813f32ba530d54907cef3e3 470 SUPERFAMILY SSF52540 161 405 1.22E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4248 526a73043813f32ba530d54907cef3e3 470 Gene3D G3DSA:1.10.8.60 333 400 3.6E-22 T 12-10-2018 Amet_4248 526a73043813f32ba530d54907cef3e3 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 185 198 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_4248 526a73043813f32ba530d54907cef3e3 470 Gene3D G3DSA:3.40.50.300 147 332 2.6E-64 T 12-10-2018 Amet_4248 526a73043813f32ba530d54907cef3e3 470 Pfam PF00158 Sigma-54 interaction domain 161 329 1.4E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_4248 526a73043813f32ba530d54907cef3e3 470 SUPERFAMILY SSF46689 375 468 1.19E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4248 526a73043813f32ba530d54907cef3e3 470 SUPERFAMILY SSF55785 25 117 7.59E-9 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4248 526a73043813f32ba530d54907cef3e3 470 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 113 1.4E-6 T 12-10-2018 IPR000014 PAS domain Amet_4248 526a73043813f32ba530d54907cef3e3 470 Gene3D G3DSA:1.10.10.60 401 470 1.3E-14 T 12-10-2018 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 91 129 3.1E-16 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 SUPERFAMILY SSF54862 83 221 2.01E-35 T 12-10-2018 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Gene3D G3DSA:3.10.20.740 4 131 7.1E-39 T 12-10-2018 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 230 514 2.8E-96 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal Amet_0641 15ccf74c8ba45a29be1622961c109442 582 SUPERFAMILY SSF54292 5 82 1.62E-15 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 SMART SM00902 520 580 7.1E-27 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Gene3D G3DSA:3.40.50.1780 213 517 7.9E-154 T 12-10-2018 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 SUPERFAMILY SSF53920 197 577 3.4E-131 T 12-10-2018 IPR009016 Iron hydrogenase Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 84 1.2E-18 T 12-10-2018 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Gene3D G3DSA:3.30.70.20 150 212 7.9E-154 T 12-10-2018 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 SMART SM00929 91 131 6.7E-18 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 147 518 1.6E-160 T 12-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Gene3D G3DSA:4.10.260.20 521 582 2.5E-18 T 12-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Gene3D G3DSA:3.40.950.10 279 508 7.9E-154 T 12-10-2018 Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Pfam PF02256 Iron hydrogenase small subunit 523 579 3.2E-24 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit Amet_0641 15ccf74c8ba45a29be1622961c109442 582 Pfam PF00037 4Fe-4S binding domain 194 213 5.6E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 SMART SM00387 486 595 1.1E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 1.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 574 1.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 1.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 593 1.6E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 SUPERFAMILY SSF47384 367 441 2.75E-9 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 593 1.9E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 Gene3D G3DSA:1.10.287.130 365 442 7.5E-9 T 12-10-2018 Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 SUPERFAMILY SSF55874 430 594 1.33E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3002 12d5cb672fc2f6b905c3eef675b5610c 595 Gene3D G3DSA:3.30.565.10 446 595 1.2E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 373 6.6E-7 T 12-10-2018 Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 6.6E-7 T 12-10-2018 Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 SUPERFAMILY SSF56425 231 350 2.41E-31 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 Gene3D G3DSA:3.50.50.60 8 428 4.9E-187 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 Pfam PF00890 FAD binding domain 11 377 2.3E-21 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 SUPERFAMILY SSF46977 428 546 6.54E-28 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 Pfam PF02910 Fumarate reductase flavoprotein C-term 439 540 1.5E-5 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 PIRSF PIRSF000171 1 562 1.8E-208 T 12-10-2018 Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 Gene3D G3DSA:1.20.58.100 429 525 4.9E-187 T 12-10-2018 Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 Gene3D G3DSA:3.90.700.10 244 350 4.9E-187 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3495 3c8b97931cff0cc44df2a779531af79d 562 SUPERFAMILY SSF51905 8 413 1.36E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 200 216 8.8E-19 T 12-10-2018 Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 225 239 8.8E-19 T 12-10-2018 Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 342 366 8.8E-19 T 12-10-2018 Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 305 317 8.8E-19 T 12-10-2018 Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 Gene3D G3DSA:3.40.50.150 198 484 7.5E-82 T 12-10-2018 Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 Gene3D G3DSA:1.20.1260.30 1 194 1.3E-50 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 5 495 3.2E-117 T 12-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 Pfam PF02384 N-6 DNA Methylase 176 488 1.0E-107 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 Pfam PF12161 HsdM N-terminal domain 7 163 2.4E-17 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Amet_1607 cd2c506f91b1defcb52e7981f92e90c0 858 SUPERFAMILY SSF53335 6 542 7.33E-121 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_3809 9fd1bce358e7cd922f7fa2460d9d5664 331 Pfam PF12833 Helix-turn-helix domain 251 329 2.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3809 9fd1bce358e7cd922f7fa2460d9d5664 331 SMART SM00342 245 328 1.6E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3809 9fd1bce358e7cd922f7fa2460d9d5664 331 SUPERFAMILY SSF46689 229 278 9.86E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3809 9fd1bce358e7cd922f7fa2460d9d5664 331 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 6.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3809 9fd1bce358e7cd922f7fa2460d9d5664 331 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 6.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3809 9fd1bce358e7cd922f7fa2460d9d5664 331 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 282 324 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_3809 9fd1bce358e7cd922f7fa2460d9d5664 331 Gene3D G3DSA:1.10.10.60 225 331 4.2E-23 T 12-10-2018 Amet_3809 9fd1bce358e7cd922f7fa2460d9d5664 331 SUPERFAMILY SSF46689 282 330 3.94E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1355 bed869c013f189f2e046c2e77640a67d 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Amet_1355 bed869c013f189f2e046c2e77640a67d 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 5 126 1.3E-45 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Amet_1355 bed869c013f189f2e046c2e77640a67d 127 Pfam PF01597 Glycine cleavage H-protein 7 125 1.1E-43 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Amet_1355 bed869c013f189f2e046c2e77640a67d 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 124 40.258 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Amet_1355 bed869c013f189f2e046c2e77640a67d 127 Gene3D G3DSA:2.40.50.100 1 127 2.3E-50 T 12-10-2018 Amet_1355 bed869c013f189f2e046c2e77640a67d 127 SUPERFAMILY SSF51230 3 125 1.48E-41 T 12-10-2018 IPR011053 Single hybrid motif Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 Gene3D G3DSA:2.60.40.1180 525 629 7.0E-36 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 1 627 42.271 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 Gene3D G3DSA:2.60.40.10 2 122 4.7E-42 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 26 108 1.1E-19 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 Pfam PF00128 Alpha amylase, catalytic domain 178 251 6.2E-11 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 SMART SM00642 152 510 8.2E-8 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 SUPERFAMILY SSF81296 37 106 1.68E-9 T 12-10-2018 IPR014756 Immunoglobulin E-set Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 SUPERFAMILY SSF51011 526 627 1.01E-29 T 12-10-2018 Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 10 624 1.2E-267 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 530 625 3.6E-18 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 PIRSF PIRSF000463 1 631 2.8E-273 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 SUPERFAMILY SSF51445 83 518 1.01E-109 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_2949 4731c2961b871fa15335dc6dd8be2d0c 631 Gene3D G3DSA:3.20.20.80 125 524 2.2E-159 T 12-10-2018 Amet_1486 2d813ae2cd4c0f2f0cd4de79d8441e75 419 SUPERFAMILY SSF53187 1 183 3.14E-31 T 12-10-2018 Amet_1486 2d813ae2cd4c0f2f0cd4de79d8441e75 419 SMART SM00646 61 180 3.3E-8 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_1486 2d813ae2cd4c0f2f0cd4de79d8441e75 419 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 180 1.5E-34 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_1486 2d813ae2cd4c0f2f0cd4de79d8441e75 419 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 221 345 4.7E-12 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Amet_1486 2d813ae2cd4c0f2f0cd4de79d8441e75 419 Gene3D G3DSA:3.40.630.40 1 187 1.4E-33 T 12-10-2018 Amet_0052 9d1c24f3f57f095d8d7839456a7dd526 402 Pfam PF04055 Radical SAM superfamily 42 194 6.8E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_0052 9d1c24f3f57f095d8d7839456a7dd526 402 SUPERFAMILY SSF102114 36 361 5.89E-67 T 12-10-2018 Amet_0052 9d1c24f3f57f095d8d7839456a7dd526 402 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 296 381 3.0E-9 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Amet_0052 9d1c24f3f57f095d8d7839456a7dd526 402 SMART SM00729 37 239 0.0011 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_0052 9d1c24f3f57f095d8d7839456a7dd526 402 Pfam PF13353 4Fe-4S single cluster domain 41 127 3.5E-8 T 12-10-2018 Amet_0052 9d1c24f3f57f095d8d7839456a7dd526 402 PIRSF PIRSF037420 23 396 7.5E-135 T 12-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Amet_0052 9d1c24f3f57f095d8d7839456a7dd526 402 Gene3D G3DSA:3.20.20.70 37 391 5.0E-50 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0052 9d1c24f3f57f095d8d7839456a7dd526 402 TIGRFAM TIGR04054 rSAM_NirJ1: putative heme d1 biosynthesis radical SAM protein NirJ1 2 388 2.3E-221 T 12-10-2018 IPR023930 Putative heme d1 biosynthesis protein, NirJ1 Amet_0677 e8e114f432db31f06336f03355605d88 298 SUPERFAMILY SSF56529 84 297 5.49E-74 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amet_0677 e8e114f432db31f06336f03355605d88 298 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 86 297 1.6E-68 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Amet_0677 e8e114f432db31f06336f03355605d88 298 Gene3D G3DSA:3.90.850.10 81 298 2.2E-83 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amet_2629 b2e3b9513afb50047659d117c5eb45b8 409 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 407 1.3E-140 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Amet_2629 b2e3b9513afb50047659d117c5eb45b8 409 Gene3D G3DSA:2.40.30.10 192 354 9.4E-128 T 12-10-2018 Amet_2629 b2e3b9513afb50047659d117c5eb45b8 409 SUPERFAMILY SSF51905 4 406 1.27E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_2629 b2e3b9513afb50047659d117c5eb45b8 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.0E-7 T 12-10-2018 Amet_2629 b2e3b9513afb50047659d117c5eb45b8 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 384 3.0E-7 T 12-10-2018 Amet_2629 b2e3b9513afb50047659d117c5eb45b8 409 SUPERFAMILY SSF160996 193 355 4.97E-39 T 12-10-2018 Amet_2629 b2e3b9513afb50047659d117c5eb45b8 409 Pfam PF03486 HI0933-like protein 4 407 1.6E-135 T 12-10-2018 Amet_2629 b2e3b9513afb50047659d117c5eb45b8 409 Gene3D G3DSA:3.50.50.60 6 403 9.4E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_2629 b2e3b9513afb50047659d117c5eb45b8 409 Gene3D G3DSA:1.10.8.260 273 337 9.4E-128 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily Amet_0702 48b94470ae350e035e3bbbd5c1a1db9e 373 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 308 321 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amet_0702 48b94470ae350e035e3bbbd5c1a1db9e 373 SUPERFAMILY SSF46785 6 59 9.97E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0702 48b94470ae350e035e3bbbd5c1a1db9e 373 Pfam PF00294 pfkB family carbohydrate kinase 63 352 7.4E-58 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Amet_0702 48b94470ae350e035e3bbbd5c1a1db9e 373 Gene3D G3DSA:3.40.1190.20 57 371 4.2E-80 T 12-10-2018 IPR029056 Ribokinase-like Amet_0702 48b94470ae350e035e3bbbd5c1a1db9e 373 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 51 6.0E-7 T 12-10-2018 Amet_0702 48b94470ae350e035e3bbbd5c1a1db9e 373 SUPERFAMILY SSF53613 64 360 2.49E-62 T 12-10-2018 IPR029056 Ribokinase-like Amet_0702 48b94470ae350e035e3bbbd5c1a1db9e 373 Gene3D G3DSA:1.10.10.10 7 53 1.2E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0648 2f6301903167ceb03dbeeac7d0d705e1 275 SUPERFAMILY SSF55021 175 270 6.7E-23 T 12-10-2018 Amet_0648 2f6301903167ceb03dbeeac7d0d705e1 275 SUPERFAMILY SSF53850 1 188 2.28E-51 T 12-10-2018 Amet_0648 2f6301903167ceb03dbeeac7d0d705e1 275 Gene3D G3DSA:3.40.190.10 5 178 5.8E-53 T 12-10-2018 Amet_0648 2f6301903167ceb03dbeeac7d0d705e1 275 Gene3D G3DSA:3.40.190.10 83 170 5.8E-53 T 12-10-2018 Amet_0648 2f6301903167ceb03dbeeac7d0d705e1 275 Pfam PF00800 Prephenate dehydratase 3 181 2.0E-57 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Amet_0648 2f6301903167ceb03dbeeac7d0d705e1 275 Gene3D G3DSA:3.30.70.260 183 273 7.8E-30 T 12-10-2018 Amet_0648 2f6301903167ceb03dbeeac7d0d705e1 275 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 219 226 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Amet_4508 48eef58ade21c994746ab7c9f13c5fb6 159 Gene3D G3DSA:2.30.30.840 1 59 3.9E-28 T 12-10-2018 Amet_4508 48eef58ade21c994746ab7c9f13c5fb6 159 Pfam PF02559 CarD-like/TRCF domain 2 109 3.2E-19 T 12-10-2018 IPR003711 CarD-like/TRCF domain Amet_4508 48eef58ade21c994746ab7c9f13c5fb6 159 Gene3D G3DSA:1.20.58.1290 60 159 3.0E-35 T 12-10-2018 Amet_4508 48eef58ade21c994746ab7c9f13c5fb6 159 SUPERFAMILY SSF141259 1 62 3.4E-14 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily Amet_4508 48eef58ade21c994746ab7c9f13c5fb6 159 SMART SM01058 1 111 1.4E-35 T 12-10-2018 IPR003711 CarD-like/TRCF domain Amet_3225 2adcf5e27aad2c5ddb8a05672bbca01d 90 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 8 86 3.6E-27 T 12-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein Amet_3225 2adcf5e27aad2c5ddb8a05672bbca01d 90 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 82 5.0E-40 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Amet_3225 2adcf5e27aad2c5ddb8a05672bbca01d 90 PIRSF PIRSF002736 1 90 4.6E-27 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Amet_3225 2adcf5e27aad2c5ddb8a05672bbca01d 90 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 9 87 2.0E-23 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 SUPERFAMILY SSF158472 291 338 1.96E-7 T 12-10-2018 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 Gene3D G3DSA:3.30.450.20 140 272 7.1E-22 T 12-10-2018 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 Gene3D G3DSA:3.30.450.40 386 537 8.8E-21 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 SMART SM00065 395 538 4.1E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 Pfam PF00672 HAMP domain 291 338 1.3E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 Pfam PF01966 HD domain 561 681 5.1E-17 T 12-10-2018 IPR006674 HD domain Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 SMART SM00304 291 343 1.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 SUPERFAMILY SSF109604 537 720 1.31E-39 T 12-10-2018 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 SUPERFAMILY SSF55781 376 539 6.11E-25 T 12-10-2018 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 Gene3D G3DSA:1.10.3210.10 538 723 2.5E-68 T 12-10-2018 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 Pfam PF13185 GAF domain 395 529 2.1E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 Gene3D G3DSA:1.10.287.130 288 385 1.3E-6 T 12-10-2018 Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 SMART SM00471 555 690 1.7E-11 T 12-10-2018 IPR003607 HD/PDEase domain Amet_1256 8d3d3f7b430038fdab995e8995c77314 723 Pfam PF02743 Cache domain 52 253 1.8E-15 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 SUPERFAMILY SSF52540 160 333 3.38E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 Pfam PF01018 GTP1/OBG 3 157 1.6E-58 T 12-10-2018 IPR006169 GTP1/OBG domain Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 Hamap MF_01454 GTPase Obg [obg]. 1 330 48.447 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 326 3.7E-140 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 8.9E-37 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 8.9E-37 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 8.9E-37 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 8.9E-37 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 SUPERFAMILY SSF102741 358 426 2.48E-19 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 PIRSF PIRSF002401 1 374 1.2E-142 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 Gene3D G3DSA:3.40.50.300 158 342 9.3E-60 T 12-10-2018 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 Gene3D G3DSA:2.40.240.60 358 426 1.1E-18 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 Gene3D G3DSA:2.70.210.12 1 157 3.3E-56 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 325 2.7E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 Pfam PF09269 Domain of unknown function (DUF1967) 358 425 1.2E-23 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 SUPERFAMILY SSF82051 1 157 5.1E-54 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 Pfam PF01926 50S ribosome-binding GTPase 160 283 4.1E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2307 f78eb468c82a6957e12708ee73538d8e 427 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 358 425 1.3E-21 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Amet_2054 24627a9c96bfcc2ec7661e0419d57626 414 Gene3D G3DSA:3.30.470.20 106 414 4.2E-80 T 12-10-2018 Amet_2054 24627a9c96bfcc2ec7661e0419d57626 414 Pfam PF13535 ATP-grasp domain 147 292 3.0E-28 T 12-10-2018 Amet_2054 24627a9c96bfcc2ec7661e0419d57626 414 SUPERFAMILY SSF56059 95 323 1.94E-40 T 12-10-2018 Amet_2499 9d456aca8e175f7ec44cd06d9e97e06d 254 Pfam PF12685 SpoIIIAH-like protein 8 250 8.5E-49 T 12-10-2018 IPR024232 Stage III sporulation protein AH-like Amet_2499 9d456aca8e175f7ec44cd06d9e97e06d 254 Gene3D G3DSA:3.30.300.270 140 253 3.9E-25 T 12-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 5 806 25.046 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 708 754 6.4E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 603 5.9E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 503 548 2.1E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 802 8.4E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 609 654 2.5E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 657 703 3.7E-15 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Gene3D G3DSA:3.90.199.10 32 486 1.3E-221 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Gene3D G3DSA:1.10.268.10 369 457 1.3E-221 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 SUPERFAMILY SSF101904 498 814 1.7E-110 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 SUPERFAMILY SSF56719 30 486 5.75E-185 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 804 0.0 T 12-10-2018 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Gene3D G3DSA:3.30.1360.40 236 332 1.3E-221 T 12-10-2018 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 471 5.3E-166 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 Gene3D G3DSA:2.120.10.90 495 805 1.2E-127 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amet_0007 e87fd1368d2a6fbb273372303e47e445 830 SMART SM00434 11 464 3.8E-294 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_4758 0de405711ede55ef52d3c4729d32fc5e 229 SMART SM00862 149 226 7.3E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_4758 0de405711ede55ef52d3c4729d32fc5e 229 SMART SM00448 3 113 1.6E-46 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4758 0de405711ede55ef52d3c4729d32fc5e 229 Gene3D G3DSA:3.40.50.2300 1 122 1.7E-37 T 12-10-2018 Amet_4758 0de405711ede55ef52d3c4729d32fc5e 229 SUPERFAMILY SSF52172 4 119 7.26E-42 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4758 0de405711ede55ef52d3c4729d32fc5e 229 SUPERFAMILY SSF46894 127 226 7.78E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_4758 0de405711ede55ef52d3c4729d32fc5e 229 Gene3D G3DSA:1.10.10.10 128 229 2.2E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4758 0de405711ede55ef52d3c4729d32fc5e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 8.5E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_4758 0de405711ede55ef52d3c4729d32fc5e 229 Pfam PF00072 Response regulator receiver domain 5 114 2.7E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4629 d6e4659f2ed1eb13c57ae2d55e0debcc 359 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 131 148 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 Amet_4629 d6e4659f2ed1eb13c57ae2d55e0debcc 359 Gene3D G3DSA:3.40.190.10 136 348 1.7E-73 T 12-10-2018 Amet_4629 d6e4659f2ed1eb13c57ae2d55e0debcc 359 Gene3D G3DSA:3.40.190.10 42 322 1.7E-73 T 12-10-2018 Amet_4629 d6e4659f2ed1eb13c57ae2d55e0debcc 359 PIRSF PIRSF002825 1 357 3.8E-81 T 12-10-2018 IPR026045 Ferric binding protein Amet_4629 d6e4659f2ed1eb13c57ae2d55e0debcc 359 SUPERFAMILY SSF53850 37 342 9.39E-54 T 12-10-2018 Amet_4629 d6e4659f2ed1eb13c57ae2d55e0debcc 359 Pfam PF13343 Bacterial extracellular solute-binding protein 87 302 9.1E-15 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 776 7.5E-97 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 356 493 1.6E-23 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 Hamap MF_01973 Lon protease [lon]. 13 776 71.761 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 204 5.5E-41 T 12-10-2018 IPR003111 Lon, substrate-binding domain Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 Gene3D G3DSA:2.30.130.40 8 118 2.2E-29 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 SMART SM00382 352 497 1.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 SUPERFAMILY SSF54211 599 774 1.02E-56 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 SMART SM00464 12 206 5.2E-68 T 12-10-2018 IPR003111 Lon, substrate-binding domain Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 TIGRFAM TIGR00763 lon: endopeptidase La 14 775 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 Gene3D G3DSA:3.40.50.300 317 495 3.7E-68 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 3.9E-54 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 730 748 3.9E-54 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 360 379 3.9E-54 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 3.9E-54 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 599 615 3.9E-54 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 Gene3D G3DSA:1.20.58.1480 125 249 5.7E-44 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 SUPERFAMILY SSF88697 12 204 5.47E-43 T 12-10-2018 IPR015947 PUA-like superfamily Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 Gene3D G3DSA:3.30.230.10 597 783 7.1E-83 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 680 688 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 Gene3D G3DSA:1.10.8.60 496 588 2.0E-30 T 12-10-2018 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 PIRSF PIRSF001174 1 779 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Amet_1072 15989c74c00468bbf01e36f11d6579f0 783 SUPERFAMILY SSF52540 314 591 3.11E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 Pfam PF00512 His Kinase A (phospho-acceptor) domain 363 428 2.3E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 SMART SM00304 186 238 1.8E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 SMART SM00388 362 429 4.6E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 Pfam PF00672 HAMP domain 187 234 1.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 SUPERFAMILY SSF47384 347 427 9.22E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 Gene3D G3DSA:3.30.565.10 436 586 1.1E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 Gene3D G3DSA:1.20.1480.50 150 244 6.7E-11 T 12-10-2018 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 Pfam PF00989 PAS fold 247 353 4.1E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 7.9E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 7.9E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 584 7.9E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 7.9E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 SUPERFAMILY SSF55874 418 584 9.56E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 Pfam PF16736 Single Cache-like 30 149 9.5E-8 T 12-10-2018 IPR031967 PhoR, single Cache-like domain Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 SMART SM00387 475 586 1.3E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 585 1.7E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 SUPERFAMILY SSF158472 187 237 3.01E-9 T 12-10-2018 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 Gene3D G3DSA:1.10.287.130 352 430 3.4E-23 T 12-10-2018 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 Gene3D G3DSA:3.30.450.20 253 351 9.9E-13 T 12-10-2018 Amet_3086 6fb0bf1d575e415929980a71eb2768c1 586 SUPERFAMILY SSF55785 251 358 1.49E-8 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 62 75 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 SUPERFAMILY SSF88946 14 106 3.92E-33 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 224 250 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 PIRSF PIRSF000770 103 258 7.0E-15 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 PIRSF PIRSF000770 1 106 2.8E-20 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 PRINTS PR00046 Major sigma-70 factor signature 86 94 1.9E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 PRINTS PR00046 Major sigma-70 factor signature 207 219 1.9E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 PRINTS PR00046 Major sigma-70 factor signature 62 75 1.9E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 PRINTS PR00046 Major sigma-70 factor signature 239 250 1.9E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 PRINTS PR00046 Major sigma-70 factor signature 224 239 1.9E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 Gene3D G3DSA:1.20.120.1810 3 106 7.7E-27 T 12-10-2018 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 SUPERFAMILY SSF88659 110 183 8.83E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 23 253 8.6E-107 T 12-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 33 254 8.4E-83 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 253 2.1E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 Pfam PF04539 Sigma-70 region 3 118 178 6.1E-8 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 Pfam PF04542 Sigma-70 region 2 38 104 6.0E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 SUPERFAMILY SSF88659 171 256 4.3E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 Pfam PF04545 Sigma-70, region 4 204 251 7.9E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amet_2214 2ff3c502b8b9cd323a9fb4e9b19431bb 258 Gene3D G3DSA:1.20.140.160 109 257 1.5E-30 T 12-10-2018 Amet_2323 0d8c1d09010eed850fbb1f85f6a9d0a6 467 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 467 212.298 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Amet_2323 0d8c1d09010eed850fbb1f85f6a9d0a6 467 SUPERFAMILY SSF53383 81 466 1.77E-51 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2323 0d8c1d09010eed850fbb1f85f6a9d0a6 467 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 8 463 1.6E-190 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Amet_2323 0d8c1d09010eed850fbb1f85f6a9d0a6 467 Pfam PF03841 L-seryl-tRNA selenium transferase 86 450 6.4E-165 T 12-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Amet_2323 0d8c1d09010eed850fbb1f85f6a9d0a6 467 Gene3D G3DSA:3.90.1150.110 9 454 5.6E-177 T 12-10-2018 Amet_2323 0d8c1d09010eed850fbb1f85f6a9d0a6 467 Gene3D G3DSA:3.40.640.10 98 362 5.6E-177 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_2323 0d8c1d09010eed850fbb1f85f6a9d0a6 467 Pfam PF12390 Selenocysteine synthase N terminal 7 46 4.0E-6 T 12-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Amet_3835 1283acc79afc0367932604533452cb26 315 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 15 306 6.4E-115 T 12-10-2018 Amet_3835 1283acc79afc0367932604533452cb26 315 SUPERFAMILY SSF102114 96 284 4.71E-21 T 12-10-2018 Amet_3835 1283acc79afc0367932604533452cb26 315 TIGRFAM TIGR04395 cutC_activ_rSAM: choline TMA-lyase-activating enzyme 9 315 6.4E-171 T 12-10-2018 IPR030905 Choline TMA-lyase-activating enzyme Amet_3835 1283acc79afc0367932604533452cb26 315 ProSitePatterns PS01087 Radical activating enzymes signature. 26 47 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Amet_3835 1283acc79afc0367932604533452cb26 315 Hamap MF_02059 Choline trimethylamine-lyase activating enzyme [cutD]. 8 315 59.54 T 12-10-2018 IPR030905 Choline TMA-lyase-activating enzyme Amet_3835 1283acc79afc0367932604533452cb26 315 PIRSF PIRSF000371 5 313 2.1E-100 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Amet_3835 1283acc79afc0367932604533452cb26 315 Gene3D G3DSA:3.20.20.70 75 312 1.8E-66 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3835 1283acc79afc0367932604533452cb26 315 Gene3D G3DSA:3.20.20.70 11 74 6.3E-15 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3835 1283acc79afc0367932604533452cb26 315 SUPERFAMILY SSF54862 16 118 1.6E-16 T 12-10-2018 Amet_3835 1283acc79afc0367932604533452cb26 315 Pfam PF04055 Radical SAM superfamily 33 250 3.1E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3835 1283acc79afc0367932604533452cb26 315 Pfam PF13187 4Fe-4S dicluster domain 64 109 1.2E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_1766 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_1766 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_1766 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1766 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1766 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_3854 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_3854 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_3854 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3854 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3854 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_4685 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_4685 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_4685 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4685 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4685 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_1045 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_1045 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_1045 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1045 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1045 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_2113 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_2113 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_2113 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2113 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2113 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_3560 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_3560 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_3560 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3560 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3560 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_3971 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_3971 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_3971 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3971 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3971 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_1472 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_1472 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_1472 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1472 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1472 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_4080 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_4080 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_4080 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4080 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4080 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_2845 70f3033ca9b27078ee6e78c9930cd841 247 Gene3D G3DSA:3.40.50.300 64 245 5.1E-46 T 12-10-2018 Amet_2845 70f3033ca9b27078ee6e78c9930cd841 247 Pfam PF01695 IstB-like ATP binding protein 55 229 1.5E-56 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_2845 70f3033ca9b27078ee6e78c9930cd841 247 SUPERFAMILY SSF52540 66 228 3.56E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2845 70f3033ca9b27078ee6e78c9930cd841 247 SMART SM00382 99 232 2.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2845 70f3033ca9b27078ee6e78c9930cd841 247 PIRSF PIRSF003073 1 246 3.7E-94 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 SUPERFAMILY SSF53067 2 248 1.37E-80 T 12-10-2018 Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 Gene3D G3DSA:3.30.420.40 2 247 4.4E-84 T 12-10-2018 Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 440 4.2E-37 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 PIRSF PIRSF000538 1 494 4.0E-166 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 TIGRFAM TIGR01312 XylB: xylulokinase 4 482 4.9E-186 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 131 143 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 246 1.9E-78 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 Gene3D G3DSA:3.30.420.40 248 489 5.7E-77 T 12-10-2018 Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 SUPERFAMILY SSF53067 248 489 1.94E-64 T 12-10-2018 Amet_3794 1c78bd660c9c8fbe204130e3ad3f0565 495 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 353 373 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amet_3640 0367db944655a1b7d6c980d6b0c88fbf 192 SUPERFAMILY SSF46785 1 155 4.13E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3640 0367db944655a1b7d6c980d6b0c88fbf 192 Pfam PF12840 Helix-turn-helix domain 11 69 1.0E-11 T 12-10-2018 Amet_3640 0367db944655a1b7d6c980d6b0c88fbf 192 Gene3D G3DSA:1.10.10.10 5 84 3.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 TIGRFAM TIGR01229 rocF_arginase: arginase 5 293 4.1E-75 T 12-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 Pfam PF00491 Arginase family 2 291 7.4E-67 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 PIRSF PIRSF036979 1 296 6.9E-36 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 ProSitePatterns PS01053 Arginase family signature. 225 246 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 Gene3D G3DSA:3.40.800.10 2 296 5.8E-92 T 12-10-2018 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 PRINTS PR00116 Arginase signature 257 271 1.5E-35 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 PRINTS PR00116 Arginase signature 95 110 1.5E-35 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 PRINTS PR00116 Arginase signature 222 251 1.5E-35 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 PRINTS PR00116 Arginase signature 118 145 1.5E-35 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 PRINTS PR00116 Arginase signature 172 190 1.5E-35 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Amet_4424 374c27fed8e4ecf117d1943bd9410156 298 SUPERFAMILY SSF52768 1 296 2.7E-76 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 Gene3D G3DSA:1.10.8.540 485 573 1.9E-31 T 12-10-2018 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 Gene3D G3DSA:3.40.30.60 341 484 1.4E-55 T 12-10-2018 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 PIRSF PIRSF005419 1 675 1.2E-264 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 Pfam PF00771 FHIPEP family 15 665 9.6E-275 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 220 234 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 5 673 4.5E-266 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 Gene3D G3DSA:1.10.490.80 576 673 2.2E-21 T 12-10-2018 Amet_2703 007d42b5e629e4a6c3d6eb73cd47ceaa 675 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 12-10-2018 IPR025505 FHIPEP conserved site Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 SUPERFAMILY SSF55008 3 77 2.75E-19 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 Gene3D G3DSA:3.30.70.100 1 74 3.9E-18 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 ProSitePatterns PS01047 Heavy-metal-associated domain. 89 118 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 735 747 7.4E-30 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 637 648 7.4E-30 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 527 7.4E-30 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 712 731 7.4E-30 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 342 356 7.4E-30 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 659 669 7.4E-30 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 Gene3D G3DSA:3.40.50.1000 494 763 8.2E-94 T 12-10-2018 IPR023214 HAD superfamily Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 SUPERFAMILY SSF56784 512 812 7.07E-59 T 12-10-2018 IPR036412 HAD-like superfamily Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 SUPERFAMILY SSF55008 80 153 2.23E-20 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 84 148 1.6E-10 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 13 72 2.9E-9 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 ProSitePatterns PS01047 Heavy-metal-associated domain. 14 43 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 Gene3D G3DSA:3.40.1110.10 524 644 8.2E-94 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 452 800 1.1E-67 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 265 428 2.0E-24 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 232 814 2.2E-187 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 SUPERFAMILY SSF81653 296 392 5.36E-28 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 Pfam PF00702 haloacid dehalogenase-like hydrolase 509 725 3.2E-44 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 SUPERFAMILY SSF81665 243 791 4.58E-10 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 Gene3D G3DSA:2.70.150.20 285 397 1.2E-40 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 Pfam PF00122 E1-E2 ATPase 295 492 2.2E-50 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 Gene3D G3DSA:3.30.70.100 81 159 9.5E-22 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 515 521 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 Pfam PF00403 Heavy-metal-associated domain 86 147 1.5E-16 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 Pfam PF00403 Heavy-metal-associated domain 13 71 2.1E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 35 58 5.2E-14 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 9 34 5.2E-14 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 172 193 5.2E-14 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 64 84 5.2E-14 T 12-10-2018 Amet_3272 837d04eb2613b1919c07f23ec9dbe5b1 826 PRINTS PR00942 Copper-transporting ATPase 1 signature 107 128 5.2E-14 T 12-10-2018 Amet_2211 773c097028aedb7e2f0625e8f8704b13 744 Pfam PF02901 Pyruvate formate lyase-like 17 602 4.1E-215 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Amet_2211 773c097028aedb7e2f0625e8f8704b13 744 Gene3D G3DSA:3.20.70.20 5 743 0.0 T 12-10-2018 Amet_2211 773c097028aedb7e2f0625e8f8704b13 744 Pfam PF01228 Glycine radical 618 724 9.2E-46 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 Amet_2211 773c097028aedb7e2f0625e8f8704b13 744 PIRSF PIRSF000379 1 743 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Amet_2211 773c097028aedb7e2f0625e8f8704b13 744 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 741 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Amet_2211 773c097028aedb7e2f0625e8f8704b13 744 SUPERFAMILY SSF51998 2 741 1.71E-291 T 12-10-2018 Amet_2211 773c097028aedb7e2f0625e8f8704b13 744 ProSitePatterns PS00850 Glycine radical domain signature. 713 721 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Amet_4751 5ed95f5523cac281378c1fb024c23809 403 SUPERFAMILY SSF50156 292 401 9.07E-20 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 Gene3D G3DSA:2.30.42.10 312 403 9.6E-18 T 12-10-2018 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 PRINTS PR00834 HtrA/DegQ protease family signature 144 156 1.7E-33 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 PRINTS PR00834 HtrA/DegQ protease family signature 167 187 1.7E-33 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 PRINTS PR00834 HtrA/DegQ protease family signature 268 285 1.7E-33 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 PRINTS PR00834 HtrA/DegQ protease family signature 352 364 1.7E-33 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 PRINTS PR00834 HtrA/DegQ protease family signature 207 231 1.7E-33 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 1.7E-33 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 SUPERFAMILY SSF50494 100 306 6.67E-60 T 12-10-2018 IPR009003 Peptidase S1, PA clan Amet_4751 5ed95f5523cac281378c1fb024c23809 403 Pfam PF13180 PDZ domain 325 401 3.3E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 Gene3D G3DSA:2.40.10.120 91 307 2.6E-71 T 12-10-2018 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 SMART SM00228 314 394 0.0029 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Amet_4751 5ed95f5523cac281378c1fb024c23809 403 Pfam PF13365 Trypsin-like peptidase domain 135 275 2.4E-36 T 12-10-2018 Amet_1761 44859ebabd2ef44f95e367dff220fdc0 140 Gene3D G3DSA:3.10.180.10 2 132 1.5E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1761 44859ebabd2ef44f95e367dff220fdc0 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 125 5.8E-16 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amet_1761 44859ebabd2ef44f95e367dff220fdc0 140 SUPERFAMILY SSF54593 1 132 1.75E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_3708 f2515e3518a4f97bc7606d41f120976f 315 Gene3D G3DSA:3.40.50.880 1 302 1.3E-131 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_3708 f2515e3518a4f97bc7606d41f120976f 315 PIRSF PIRSF000450 2 310 2.7E-156 T 12-10-2018 IPR033752 MetA family Amet_3708 f2515e3518a4f97bc7606d41f120976f 315 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 32 300 42.923 T 12-10-2018 IPR033752 MetA family Amet_3708 f2515e3518a4f97bc7606d41f120976f 315 SUPERFAMILY SSF52317 18 298 2.52E-108 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_3708 f2515e3518a4f97bc7606d41f120976f 315 Pfam PF04204 Homoserine O-succinyltransferase 3 300 5.8E-144 T 12-10-2018 IPR033752 MetA family Amet_3708 f2515e3518a4f97bc7606d41f120976f 315 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 2 303 8.3E-141 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 Amet_3708 f2515e3518a4f97bc7606d41f120976f 315 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 37 290 2.0E-149 T 12-10-2018 Amet_3274 5065cd7ae627da2e662b33bfcaa9a685 229 Pfam PF07314 Protein of unknown function (DUF1461) 11 195 3.3E-50 T 12-10-2018 IPR010178 Integral membrane protein 1906 Amet_3274 5065cd7ae627da2e662b33bfcaa9a685 229 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 11 213 9.7E-31 T 12-10-2018 IPR010178 Integral membrane protein 1906 Amet_4247 4fa98f55b2bad0990d76d92183b9d38e 217 Gene3D G3DSA:3.40.1080.10 1 216 1.4E-83 T 12-10-2018 Amet_4247 4fa98f55b2bad0990d76d92183b9d38e 217 Pfam PF01144 Coenzyme A transferase 5 214 4.6E-68 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amet_4247 4fa98f55b2bad0990d76d92183b9d38e 217 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 4 214 1.0E-68 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 Amet_4247 4fa98f55b2bad0990d76d92183b9d38e 217 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 16 31 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 Amet_4247 4fa98f55b2bad0990d76d92183b9d38e 217 SMART SM00882 4 215 3.7E-78 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amet_4247 4fa98f55b2bad0990d76d92183b9d38e 217 SUPERFAMILY SSF100950 2 215 3.21E-80 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_2512 9548af95740eebecd7b8e997482efd3b 426 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 11 424 1.6E-144 T 12-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B Amet_2512 9548af95740eebecd7b8e997482efd3b 426 Pfam PF05580 SpoIVB peptidase S55 213 421 9.9E-88 T 12-10-2018 IPR008763 Peptidase S55, SpoIVB Amet_2512 9548af95740eebecd7b8e997482efd3b 426 SUPERFAMILY SSF50494 316 420 2.73E-5 T 12-10-2018 IPR009003 Peptidase S1, PA clan Amet_2512 9548af95740eebecd7b8e997482efd3b 426 SUPERFAMILY SSF50156 149 227 5.86E-9 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Amet_2512 9548af95740eebecd7b8e997482efd3b 426 Gene3D G3DSA:2.30.42.10 146 222 7.0E-11 T 12-10-2018 Amet_1236 cd0bdf06d3fa0a69b56874bd40a55a29 280 SUPERFAMILY SSF47090 212 269 1.88E-14 T 12-10-2018 IPR036365 PGBD-like superfamily Amet_1236 cd0bdf06d3fa0a69b56874bd40a55a29 280 Gene3D G3DSA:1.10.101.10 4 75 1.1E-18 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amet_1236 cd0bdf06d3fa0a69b56874bd40a55a29 280 Gene3D G3DSA:2.40.440.10 81 196 9.2E-42 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amet_1236 cd0bdf06d3fa0a69b56874bd40a55a29 280 SUPERFAMILY SSF47090 8 74 5.49E-19 T 12-10-2018 IPR036365 PGBD-like superfamily Amet_1236 cd0bdf06d3fa0a69b56874bd40a55a29 280 Pfam PF03734 L,D-transpeptidase catalytic domain 87 195 2.3E-22 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Amet_1236 cd0bdf06d3fa0a69b56874bd40a55a29 280 Pfam PF01471 Putative peptidoglycan binding domain 212 267 7.9E-14 T 12-10-2018 IPR002477 Peptidoglycan binding-like Amet_1236 cd0bdf06d3fa0a69b56874bd40a55a29 280 Pfam PF01471 Putative peptidoglycan binding domain 17 71 1.5E-15 T 12-10-2018 IPR002477 Peptidoglycan binding-like Amet_1236 cd0bdf06d3fa0a69b56874bd40a55a29 280 SUPERFAMILY SSF141523 85 196 3.53E-35 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amet_1236 cd0bdf06d3fa0a69b56874bd40a55a29 280 Gene3D G3DSA:1.10.101.10 201 276 8.3E-14 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 SUPERFAMILY SSF50621 244 384 1.01E-45 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 SUPERFAMILY SSF51419 14 251 6.98E-68 T 12-10-2018 IPR029066 PLP-binding barrel Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 Gene3D G3DSA:2.40.37.10 12 376 1.5E-130 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 Hamap MF_01201 Alanine racemase. 7 377 34.773 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 SMART SM01005 250 377 6.4E-60 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 Pfam PF00842 Alanine racemase, C-terminal domain 250 376 1.3E-41 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 Gene3D G3DSA:3.20.20.10 16 231 1.5E-130 T 12-10-2018 IPR029066 PLP-binding barrel Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 Pfam PF01168 Alanine racemase, N-terminal domain 14 236 1.1E-71 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 TIGRFAM TIGR00492 alr: alanine racemase 8 377 1.3E-119 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 PRINTS PR00992 Alanine racemase signature 33 49 1.4E-58 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 PRINTS PR00992 Alanine racemase signature 266 281 1.4E-58 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 PRINTS PR00992 Alanine racemase signature 209 236 1.4E-58 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 PRINTS PR00992 Alanine racemase signature 359 372 1.4E-58 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 PRINTS PR00992 Alanine racemase signature 69 87 1.4E-58 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 PRINTS PR00992 Alanine racemase signature 166 177 1.4E-58 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 PRINTS PR00992 Alanine racemase signature 283 298 1.4E-58 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 PRINTS PR00992 Alanine racemase signature 131 143 1.4E-58 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_4145 ec6f1bfc1427774700db6d28e7d3effc 391 PRINTS PR00992 Alanine racemase signature 304 321 1.4E-58 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 Gene3D G3DSA:1.10.10.60 528 574 7.7E-11 T 12-10-2018 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 Pfam PF08448 PAS fold 127 221 1.5E-5 T 12-10-2018 IPR013656 PAS fold-4 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 Pfam PF00158 Sigma-54 interaction domain 256 423 7.6E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 469 478 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 Gene3D G3DSA:1.10.8.60 429 504 5.1E-18 T 12-10-2018 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 SUPERFAMILY SSF46689 469 575 9.73E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 SMART SM00382 276 424 2.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 Gene3D G3DSA:3.30.450.20 121 220 7.8E-12 T 12-10-2018 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 SUPERFAMILY SSF52540 255 499 2.77E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 Gene3D G3DSA:3.40.50.300 242 428 6.0E-65 T 12-10-2018 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 343 358 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 SUPERFAMILY SSF54631 9 74 1.17E-5 T 12-10-2018 Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 SUPERFAMILY SSF55785 121 213 1.01E-6 T 12-10-2018 IPR035965 PAS domain superfamily Amet_0700 da27a4dda5946af5f05c80b9924785c6 580 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 280 293 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_2099 362e6b34c0537033d70bdd9572480bfa 596 Gene3D G3DSA:3.30.420.480 175 354 1.1E-52 T 12-10-2018 Amet_2099 362e6b34c0537033d70bdd9572480bfa 596 Pfam PF14574 Domain of unknown function (DUF4445) 176 591 8.8E-142 T 12-10-2018 IPR027980 Protein of unknown function DUF4445 Amet_2099 362e6b34c0537033d70bdd9572480bfa 596 SUPERFAMILY SSF54292 4 74 9.31E-14 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_2099 362e6b34c0537033d70bdd9572480bfa 596 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 65 6.0E-8 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amet_2099 362e6b34c0537033d70bdd9572480bfa 596 Gene3D G3DSA:3.10.20.30 1 54 5.7E-13 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_4553 1f68aa6ca91595ef1a21fa9dd28b0f29 345 SUPERFAMILY SSF50129 87 194 4.39E-5 T 12-10-2018 IPR011032 GroES-like superfamily Amet_4553 1f68aa6ca91595ef1a21fa9dd28b0f29 345 SUPERFAMILY SSF51735 181 306 2.96E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4553 1f68aa6ca91595ef1a21fa9dd28b0f29 345 Gene3D G3DSA:3.90.180.10 33 345 1.8E-18 T 12-10-2018 Amet_3296 54918d5af970383f244bf0f7babc3df3 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 90 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amet_3296 54918d5af970383f244bf0f7babc3df3 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 90 5.0E-9 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amet_3296 54918d5af970383f244bf0f7babc3df3 197 Gene3D G3DSA:1.20.120.1760 7 196 3.5E-31 T 12-10-2018 Amet_0777 ea0812fda4622e9ad68d9c5c58c3d8ef 543 Gene3D G3DSA:3.60.15.10 6 443 1.9E-154 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_0777 ea0812fda4622e9ad68d9c5c58c3d8ef 543 Pfam PF10996 Beta-Casp domain 253 381 1.0E-31 T 12-10-2018 IPR022712 Beta-Casp domain Amet_0777 ea0812fda4622e9ad68d9c5c58c3d8ef 543 SMART SM00849 13 241 7.7E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_0777 ea0812fda4622e9ad68d9c5c58c3d8ef 543 Pfam PF16661 Metallo-beta-lactamase superfamily domain 18 185 5.4E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_0777 ea0812fda4622e9ad68d9c5c58c3d8ef 543 SUPERFAMILY SSF56281 1 467 1.21E-133 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_0777 ea0812fda4622e9ad68d9c5c58c3d8ef 543 SMART SM01027 253 382 2.6E-64 T 12-10-2018 IPR022712 Beta-Casp domain Amet_0777 ea0812fda4622e9ad68d9c5c58c3d8ef 543 Gene3D G3DSA:3.40.50.10890 221 408 1.9E-154 T 12-10-2018 Amet_0777 ea0812fda4622e9ad68d9c5c58c3d8ef 543 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 397 459 1.2E-15 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Amet_1321 2c62d2b80ab14bee723e30e55f3c1449 380 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 5 369 3.9E-147 T 12-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 Amet_1321 2c62d2b80ab14bee723e30e55f3c1449 380 Gene3D G3DSA:1.10.238.260 270 379 1.0E-29 T 12-10-2018 Amet_1321 2c62d2b80ab14bee723e30e55f3c1449 380 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_1321 2c62d2b80ab14bee723e30e55f3c1449 380 Pfam PF00682 HMGL-like 4 262 4.0E-77 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amet_1321 2c62d2b80ab14bee723e30e55f3c1449 380 Gene3D G3DSA:3.20.20.70 1 268 3.1E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1321 2c62d2b80ab14bee723e30e55f3c1449 380 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 191 204 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_1321 2c62d2b80ab14bee723e30e55f3c1449 380 SUPERFAMILY SSF51569 1 280 2.01E-84 T 12-10-2018 Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 SUPERFAMILY SSF103039 45 230 1.36E-26 T 12-10-2018 IPR028976 CheC-like superfamily Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 Pfam PF02154 Flagellar motor switch protein FliM 39 229 2.7E-63 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 SUPERFAMILY SSF101801 250 329 5.23E-16 T 12-10-2018 IPR036429 SpoA-like superfamily Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 9.7E-25 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 9.7E-25 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.7E-25 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.7E-25 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 PIRSF PIRSF002888 1 331 1.7E-104 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 322 2.6E-19 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 Gene3D G3DSA:2.30.330.10 241 330 1.2E-9 T 12-10-2018 IPR036429 SpoA-like superfamily Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 4.7E-99 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_2711 6acdf43533bcef7f25834645dd17a1ec 331 Gene3D G3DSA:3.40.1550.10 45 231 4.8E-60 T 12-10-2018 IPR028976 CheC-like superfamily Amet_2699 7fd94b928d4efed9bc1b261d2167f54b 357 SMART SM00448 6 116 1.8E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2699 7fd94b928d4efed9bc1b261d2167f54b 357 PIRSF PIRSF000876 3 357 8.8E-136 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Amet_2699 7fd94b928d4efed9bc1b261d2167f54b 357 Pfam PF00072 Response regulator receiver domain 8 112 1.7E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2699 7fd94b928d4efed9bc1b261d2167f54b 357 SUPERFAMILY SSF52738 165 354 4.45E-64 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal Amet_2699 7fd94b928d4efed9bc1b261d2167f54b 357 SUPERFAMILY SSF52172 5 113 5.83E-29 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2699 7fd94b928d4efed9bc1b261d2167f54b 357 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 6 356 39.834 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Amet_2699 7fd94b928d4efed9bc1b261d2167f54b 357 Gene3D G3DSA:3.40.50.2300 3 143 3.6E-33 T 12-10-2018 Amet_2699 7fd94b928d4efed9bc1b261d2167f54b 357 Pfam PF01339 CheB methylesterase 170 351 2.1E-59 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Amet_2699 7fd94b928d4efed9bc1b261d2167f54b 357 Gene3D G3DSA:3.40.50.180 159 357 1.1E-70 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 SUPERFAMILY SSF51735 4 164 2.1E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 271 1.4E-83 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 PIRSF PIRSF000193 2 274 5.0E-83 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 Gene3D G3DSA:1.10.3730.10 170 273 5.1E-40 T 12-10-2018 Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 SUPERFAMILY SSF48179 167 272 6.12E-38 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 167 271 4.4E-39 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 Gene3D G3DSA:3.40.50.720 1 169 2.2E-46 T 12-10-2018 Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 104 5.9E-18 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 227 249 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amet_2533 10432ebbc7b88be4f67637f4d603e14e 281 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 271 27.988 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 1.7E-90 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 Gene3D G3DSA:3.40.50.720 1 245 4.4E-86 T 12-10-2018 Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 SUPERFAMILY SSF51735 4 245 6.16E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 1.9E-68 T 12-10-2018 Amet_4631 4ad3e0ef278b458a070c66549c6692eb 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 0.0032 T 12-10-2018 Amet_0030 f368283ef34ff9f8eaaa774c59ba070d 64 PIRSF PIRSF037263 1 64 3.0E-24 T 12-10-2018 IPR009296 Protein of unknown function DUF951 Amet_0030 f368283ef34ff9f8eaaa774c59ba070d 64 Pfam PF06107 Bacterial protein of unknown function (DUF951) 6 58 2.3E-25 T 12-10-2018 IPR009296 Protein of unknown function DUF951 Amet_1912 72c716bb53b0303eb68c471ed45c6b10 295 Gene3D G3DSA:3.10.180.10 1 129 1.4E-41 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1912 72c716bb53b0303eb68c471ed45c6b10 295 SUPERFAMILY SSF54593 3 128 2.63E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1912 72c716bb53b0303eb68c471ed45c6b10 295 Gene3D G3DSA:3.10.180.70 130 294 1.2E-55 T 12-10-2018 Amet_1912 72c716bb53b0303eb68c471ed45c6b10 295 SUPERFAMILY SSF54593 133 291 4.43E-42 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1912 72c716bb53b0303eb68c471ed45c6b10 295 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 123 2.9E-34 T 12-10-2018 IPR028973 PhnB-like Amet_1912 72c716bb53b0303eb68c471ed45c6b10 295 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 132 252 4.8E-41 T 12-10-2018 IPR028973 PhnB-like Amet_2920 8dafd766ab625f0fd6d1acf89a763e5f 425 Gene3D G3DSA:1.20.140.10 323 424 1.7E-20 T 12-10-2018 Amet_2920 8dafd766ab625f0fd6d1acf89a763e5f 425 SUPERFAMILY SSF48695 48 420 6.75E-124 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Amet_2920 8dafd766ab625f0fd6d1acf89a763e5f 425 Gene3D G3DSA:1.10.1130.10 45 321 6.5E-81 T 12-10-2018 Amet_2920 8dafd766ab625f0fd6d1acf89a763e5f 425 Pfam PF02335 Cytochrome c552 55 418 9.0E-103 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Amet_2920 8dafd766ab625f0fd6d1acf89a763e5f 425 PIRSF PIRSF000243 2 425 3.3E-97 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Amet_1548 1da30d014bc49dd54e2d096d55056750 136 SUPERFAMILY SSF102462 1 136 1.83E-41 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Amet_1548 1da30d014bc49dd54e2d096d55056750 136 Gene3D G3DSA:3.40.1490.10 1 135 5.0E-15 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 Amet_1548 1da30d014bc49dd54e2d096d55056750 136 Pfam PF09391 Protein of unknown function (DUF2000) 3 136 3.3E-47 T 12-10-2018 IPR018988 Protein of unknown function DUF2000 Amet_1548 1da30d014bc49dd54e2d096d55056750 136 PIRSF PIRSF033736 1 136 1.8E-45 T 12-10-2018 IPR017021 Uncharacterised conserved protein UCP033763 Amet_0872 13d902ffa6e2dc893e99e2315869b561 371 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 203 367 6.9E-29 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_0872 13d902ffa6e2dc893e99e2315869b561 371 Gene3D G3DSA:3.30.300.210 219 371 1.7E-27 T 12-10-2018 IPR038501 Spore germination GerAC superfamily Amet_0872 13d902ffa6e2dc893e99e2315869b561 371 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 3 370 6.5E-77 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 124 4.2E-18 T 12-10-2018 IPR000014 PAS domain Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 252 378 2.4E-10 T 12-10-2018 IPR000014 PAS domain Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 129 250 3.5E-20 T 12-10-2018 IPR000014 PAS domain Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Gene3D G3DSA:3.30.450.20 256 322 1.1E-18 T 12-10-2018 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Gene3D G3DSA:3.30.450.20 2 118 5.4E-20 T 12-10-2018 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Pfam PF13426 PAS domain 140 242 4.3E-15 T 12-10-2018 IPR000014 PAS domain Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Pfam PF13426 PAS domain 22 119 1.5E-12 T 12-10-2018 IPR000014 PAS domain Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SMART SM00388 398 463 2.0E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SUPERFAMILY SSF55785 140 252 7.03E-24 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SUPERFAMILY SSF47384 384 464 2.16E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SMART SM00448 653 767 2.0E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Pfam PF08447 PAS fold 278 364 9.5E-20 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Pfam PF00072 Response regulator receiver domain 655 767 6.4E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SUPERFAMILY SSF55785 265 372 2.97E-19 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Gene3D G3DSA:3.40.50.2300 647 773 1.4E-36 T 12-10-2018 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 510 625 7.1E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Gene3D G3DSA:3.30.450.20 125 255 1.4E-26 T 12-10-2018 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SMART SM00086 328 371 1.0E-7 T 12-10-2018 IPR001610 PAC motif Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SMART SM00086 201 243 0.011 T 12-10-2018 IPR001610 PAC motif Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Pfam PF00512 His Kinase A (phospho-acceptor) domain 398 463 3.0E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Gene3D G3DSA:3.30.565.10 462 632 2.7E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SUPERFAMILY SSF55785 15 119 2.27E-16 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SMART SM00387 510 626 5.5E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 565 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 604 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 623 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 579 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SUPERFAMILY SSF52172 652 772 1.85E-34 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SUPERFAMILY SSF55874 452 621 1.44E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SMART SM00091 255 323 0.0082 T 12-10-2018 IPR000014 PAS domain Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SMART SM00091 129 195 6.4E-7 T 12-10-2018 IPR000014 PAS domain Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 SMART SM00091 11 77 4.9E-9 T 12-10-2018 IPR000014 PAS domain Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Gene3D G3DSA:1.10.287.130 370 461 2.9E-29 T 12-10-2018 Amet_2069 df02be6f1d9a988a6f381f968b0d3ec6 773 Gene3D G3DSA:2.10.70.100 325 369 5.4E-8 T 12-10-2018 Amet_2261 c42c1733bf7800915bcb8ee34a568287 161 SUPERFAMILY SSF55729 18 156 2.45E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2261 c42c1733bf7800915bcb8ee34a568287 161 Gene3D G3DSA:3.40.630.30 5 161 6.7E-45 T 12-10-2018 Amet_2261 c42c1733bf7800915bcb8ee34a568287 161 Pfam PF13673 Acetyltransferase (GNAT) domain 41 125 1.4E-12 T 12-10-2018 IPR000182 GNAT domain Amet_4800 66dc1883361b28a1fb7ebb87fe90caa8 69 SMART SM01234 1 68 1.5E-41 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amet_4800 66dc1883361b28a1fb7ebb87fe90caa8 69 Pfam PF01809 Haemolytic domain 3 67 2.2E-29 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amet_4800 66dc1883361b28a1fb7ebb87fe90caa8 69 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 67 2.7E-28 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amet_4800 66dc1883361b28a1fb7ebb87fe90caa8 69 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 69 9.0E-26 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amet_4800 66dc1883361b28a1fb7ebb87fe90caa8 69 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.505 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Amet_0088 7b0bf3a0b2a722fbefd43ab224afa93f 341 Pfam PF12791 Anti-sigma factor N-terminus 7 61 3.1E-15 T 12-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 317 2.8E-9 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 SUPERFAMILY SSF54791 552 637 5.31E-23 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 PIRSF PIRSF005499 1 702 2.0E-289 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Gene3D G3DSA:3.30.230.70 233 546 3.6E-111 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 SUPERFAMILY SSF54211 5 142 2.48E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 SMART SM00316 617 687 6.2E-23 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 SUPERFAMILY SSF50249 618 695 2.73E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 SUPERFAMILY SSF55666 143 232 8.12E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 690 29.871 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Pfam PF00013 KH domain 553 610 5.5E-11 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Gene3D G3DSA:2.40.50.140 619 689 2.2E-26 T 12-10-2018 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 SUPERFAMILY SSF54211 291 484 9.11E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 SUPERFAMILY SSF46915 237 318 7.59E-13 T 12-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Pfam PF01138 3' exoribonuclease family, domain 1 320 453 6.5E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 1.1E-19 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Pfam PF00575 S1 RNA binding domain 617 687 3.4E-16 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Pfam PF03725 3' exoribonuclease family, domain 2 457 524 6.4E-7 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 4.4E-14 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Gene3D G3DSA:3.30.230.70 2 232 8.4E-80 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 688 1.1E-303 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 Gene3D G3DSA:3.30.1370.10 547 618 4.6E-19 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 SUPERFAMILY SSF55666 450 556 2.23E-26 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1737 32a131de88cbdd1267b34a14ed45cc48 702 SMART SM00322 549 614 4.3E-12 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Amet_2856 b5c89e6230a3731f2546627021532f9b 195 SMART SM01207 8 182 1.5E-76 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Amet_2856 b5c89e6230a3731f2546627021532f9b 195 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 191 2.9E-51 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Amet_2856 b5c89e6230a3731f2546627021532f9b 195 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 181 6.2E-51 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Amet_2856 b5c89e6230a3731f2546627021532f9b 195 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 190 19.974 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 SMART SM01350 167 294 4.9E-4 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 Gene3D G3DSA:3.40.50.720 1 166 1.9E-51 T 12-10-2018 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 SUPERFAMILY SSF51735 1 153 1.04E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 153 6.9E-45 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 167 277 3.1E-20 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 SUPERFAMILY SSF48179 165 294 9.64E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 Gene3D G3DSA:1.10.1040.10 167 296 2.3E-45 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 4.4E-29 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 231 258 4.4E-29 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 156 184 4.4E-29 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 4.4E-29 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Amet_3469 d7f62b5a271623d040d8f7788eedd5ec 298 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 298 3.0E-111 T 12-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 Gene3D G3DSA:3.30.10.20 353 417 3.5E-13 T 12-10-2018 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 Gene3D G3DSA:3.30.10.20 487 556 4.2E-17 T 12-10-2018 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 Gene3D G3DSA:3.30.10.20 418 486 4.4E-13 T 12-10-2018 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 SMART SM00220 10 270 6.5E-72 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 Pfam PF00069 Protein kinase domain 10 262 2.7E-56 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 Gene3D G3DSA:3.30.200.20 1 89 2.3E-32 T 12-10-2018 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 SMART SM00740 486 553 1.1E-13 T 12-10-2018 IPR005543 PASTA domain Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 SMART SM00740 417 483 1.7E-6 T 12-10-2018 IPR005543 PASTA domain Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 SMART SM00740 350 416 8.4E-12 T 12-10-2018 IPR005543 PASTA domain Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 SUPERFAMILY SSF56112 7 266 3.1E-81 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 PIRSF PIRSF000654 539 594 990.0 T 12-10-2018 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 PIRSF PIRSF000654 18 278 2.3E-38 T 12-10-2018 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 Gene3D G3DSA:1.10.510.10 91 278 6.8E-52 T 12-10-2018 Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 Pfam PF03793 PASTA domain 421 483 1.1E-6 T 12-10-2018 IPR005543 PASTA domain Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 Pfam PF03793 PASTA domain 491 553 1.2E-11 T 12-10-2018 IPR005543 PASTA domain Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 Pfam PF03793 PASTA domain 354 415 1.8E-10 T 12-10-2018 IPR005543 PASTA domain Amet_2779 a1c74b8dc0612fb7a04502f0e12f4dde 648 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 SUPERFAMILY SSF109604 637 796 2.66E-37 T 12-10-2018 Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 248 1.7E-47 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 Gene3D G3DSA:3.40.190.10 37 246 1.0E-58 T 12-10-2018 Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 465 611 2.4E-36 T 12-10-2018 IPR000160 GGDEF domain Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 SMART SM00267 455 624 4.4E-43 T 12-10-2018 IPR000160 GGDEF domain Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 SUPERFAMILY SSF55785 328 426 1.08E-12 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 Gene3D G3DSA:3.30.450.20 331 454 3.0E-18 T 12-10-2018 Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 337 461 2.1E-8 T 12-10-2018 IPR000014 PAS domain Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 SMART SM00471 630 767 1.2E-8 T 12-10-2018 IPR003607 HD/PDEase domain Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 SMART SM00062 31 250 3.7E-36 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 SUPERFAMILY SSF53850 32 249 1.18E-49 T 12-10-2018 Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 SUPERFAMILY SSF55073 471 611 8.63E-37 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 Pfam PF13487 HD domain 687 749 2.2E-21 T 12-10-2018 Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 Pfam PF00990 Diguanylate cyclase, GGDEF domain 466 610 2.4E-36 T 12-10-2018 IPR000160 GGDEF domain Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 Gene3D G3DSA:3.30.70.270 459 618 2.6E-43 T 12-10-2018 Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 Gene3D G3DSA:1.10.3210.10 619 802 1.4E-69 T 12-10-2018 Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 Pfam PF13188 PAS domain 341 414 3.4E-9 T 12-10-2018 IPR000014 PAS domain Amet_3753 113cd779b6c835d14168492e2ef8cf02 804 Gene3D G3DSA:3.40.190.10 116 208 1.0E-58 T 12-10-2018 Amet_4602 38af2bdfea95f4767c391bc781b21bf2 250 Pfam PF12804 MobA-like NTP transferase domain 22 131 3.7E-14 T 12-10-2018 IPR025877 MobA-like NTP transferase Amet_4602 38af2bdfea95f4767c391bc781b21bf2 250 Gene3D G3DSA:3.90.550.10 2 243 1.8E-59 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_4602 38af2bdfea95f4767c391bc781b21bf2 250 SUPERFAMILY SSF53448 1 242 5.63E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_4263 3c41d0d1d08d5910c810a49f4c15a5b8 285 Gene3D G3DSA:3.20.20.140 1 281 5.1E-42 T 12-10-2018 Amet_4263 3c41d0d1d08d5910c810a49f4c15a5b8 285 SUPERFAMILY SSF51556 2 281 2.33E-38 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_4263 3c41d0d1d08d5910c810a49f4c15a5b8 285 Pfam PF04909 Amidohydrolase 4 281 8.2E-31 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_3690 ac0f5fcb272b8d61968f7fee54736882 313 Gene3D G3DSA:3.40.50.720 95 282 3.3E-82 T 12-10-2018 Amet_3690 ac0f5fcb272b8d61968f7fee54736882 313 SUPERFAMILY SSF52283 32 110 8.93E-12 T 12-10-2018 Amet_3690 ac0f5fcb272b8d61968f7fee54736882 313 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 215 231 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amet_3690 ac0f5fcb272b8d61968f7fee54736882 313 SUPERFAMILY SSF51735 96 277 1.8E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3690 ac0f5fcb272b8d61968f7fee54736882 313 Gene3D G3DSA:3.40.50.720 25 305 3.3E-82 T 12-10-2018 Amet_3690 ac0f5fcb272b8d61968f7fee54736882 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 275 3.1E-54 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amet_3690 ac0f5fcb272b8d61968f7fee54736882 313 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 308 2.5E-9 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Amet_0896 a9e4aa7845cc64ec1f768a330694854f 441 Gene3D G3DSA:3.40.190.10 46 385 4.5E-128 T 12-10-2018 Amet_0896 a9e4aa7845cc64ec1f768a330694854f 441 SUPERFAMILY SSF53850 20 435 2.28E-61 T 12-10-2018 Amet_0896 a9e4aa7845cc64ec1f768a330694854f 441 TIGRFAM TIGR00756 PPR: pentatricopeptide repeat domain 234 255 0.0021 T 12-10-2018 IPR002885 Pentatricopeptide repeat Amet_0896 a9e4aa7845cc64ec1f768a330694854f 441 Gene3D G3DSA:3.40.190.10 155 429 4.5E-128 T 12-10-2018 Amet_0896 a9e4aa7845cc64ec1f768a330694854f 441 Pfam PF13416 Bacterial extracellular solute-binding protein 64 366 5.7E-29 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amet_0187 7d680bae63671082c8b1e22ae656177a 403 SUPERFAMILY SSF111369 131 318 3.14E-17 T 12-10-2018 Amet_0187 7d680bae63671082c8b1e22ae656177a 403 Gene3D G3DSA:2.40.30.170 53 326 1.0E-63 T 12-10-2018 Amet_0187 7d680bae63671082c8b1e22ae656177a 403 SUPERFAMILY SSF111369 54 151 1.26E-9 T 12-10-2018 Amet_0187 7d680bae63671082c8b1e22ae656177a 403 Gene3D G3DSA:2.40.420.20 327 385 1.0E-63 T 12-10-2018 Amet_0187 7d680bae63671082c8b1e22ae656177a 403 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 181 399 2.1E-44 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Amet_0187 7d680bae63671082c8b1e22ae656177a 403 Gene3D G3DSA:2.40.50.100 64 250 1.0E-63 T 12-10-2018 Amet_0187 7d680bae63671082c8b1e22ae656177a 403 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 317 2.6E-26 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Amet_0187 7d680bae63671082c8b1e22ae656177a 403 Gene3D G3DSA:1.10.287.470 98 215 1.0E-63 T 12-10-2018 Amet_4447 aebf271d3a7f180fbf6cf1ebf8075e83 282 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 5 276 5.3E-123 T 12-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 Amet_4447 aebf271d3a7f180fbf6cf1ebf8075e83 282 Gene3D G3DSA:3.40.50.300 2 281 1.9E-73 T 12-10-2018 Amet_4447 aebf271d3a7f180fbf6cf1ebf8075e83 282 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4447 aebf271d3a7f180fbf6cf1ebf8075e83 282 Pfam PF00005 ABC transporter 26 172 1.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4447 aebf271d3a7f180fbf6cf1ebf8075e83 282 SMART SM00382 34 220 3.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4447 aebf271d3a7f180fbf6cf1ebf8075e83 282 SUPERFAMILY SSF52540 4 233 6.37E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1257 0df412020cb898fc833cccd61f283918 163 Pfam PF00874 PRD domain 66 153 3.0E-25 T 12-10-2018 IPR011608 PRD domain GO:0006355 Amet_1257 0df412020cb898fc833cccd61f283918 163 SUPERFAMILY SSF50151 2 52 2.62E-14 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 Amet_1257 0df412020cb898fc833cccd61f283918 163 Gene3D G3DSA:1.10.1790.10 58 157 9.0E-32 T 12-10-2018 Amet_1257 0df412020cb898fc833cccd61f283918 163 Pfam PF03123 CAT RNA binding domain 2 50 9.3E-17 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 Amet_1257 0df412020cb898fc833cccd61f283918 163 SMART SM01061 2 54 1.4E-12 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 Amet_1257 0df412020cb898fc833cccd61f283918 163 Gene3D G3DSA:2.30.24.10 3 54 1.3E-16 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 Amet_1257 0df412020cb898fc833cccd61f283918 163 SUPERFAMILY SSF63520 53 155 1.19E-28 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Pfam PF00391 PEP-utilising enzyme, mobile domain 422 502 8.0E-26 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Gene3D G3DSA:1.10.189.10 344 528 2.5E-75 T 12-10-2018 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Gene3D G3DSA:3.30.470.20 243 340 6.1E-43 T 12-10-2018 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 760 778 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 SUPERFAMILY SSF51621 510 868 4.4E-131 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Gene3D G3DSA:3.50.30.10 382 508 2.5E-75 T 12-10-2018 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 SUPERFAMILY SSF56059 1 378 5.65E-145 T 12-10-2018 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 SUPERFAMILY SSF52009 377 507 5.36E-35 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Gene3D G3DSA:3.30.1490.20 10 242 9.8E-102 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 PIRSF PIRSF000853 1 878 0.0 T 12-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 449 460 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Gene3D G3DSA:1.20.80.30 110 197 9.8E-102 T 12-10-2018 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 302 353 6.8E-10 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 290 4.9E-44 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Gene3D G3DSA:3.20.20.60 531 873 2.9E-153 T 12-10-2018 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 518 868 7.6E-93 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Amet_3019 c9d6e598a23ed76126d2971e49473904 878 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 2 869 0.0 T 12-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Amet_0282 c6d187412226912cf6dec19f2e07c337 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 384 4.8E-62 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Amet_0282 c6d187412226912cf6dec19f2e07c337 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 304 7.9E-25 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Amet_0282 c6d187412226912cf6dec19f2e07c337 388 Gene3D G3DSA:1.10.287.470 95 201 1.2E-64 T 12-10-2018 Amet_0282 c6d187412226912cf6dec19f2e07c337 388 Gene3D G3DSA:2.40.420.20 48 370 1.2E-64 T 12-10-2018 Amet_0282 c6d187412226912cf6dec19f2e07c337 388 Gene3D G3DSA:2.40.50.100 61 236 1.2E-64 T 12-10-2018 Amet_0282 c6d187412226912cf6dec19f2e07c337 388 Gene3D G3DSA:2.40.30.170 50 310 1.2E-64 T 12-10-2018 Amet_0282 c6d187412226912cf6dec19f2e07c337 388 SUPERFAMILY SSF111369 50 309 5.1E-25 T 12-10-2018 Amet_4092 b7a71d0748e2807b4eefc80d67cc7cad 292 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 284 40.374 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 Amet_4092 b7a71d0748e2807b4eefc80d67cc7cad 292 PIRSF PIRSF005052 1 288 8.8E-105 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 Amet_4092 b7a71d0748e2807b4eefc80d67cc7cad 292 Gene3D G3DSA:3.40.50.300 40 164 4.1E-7 T 12-10-2018 Amet_4092 b7a71d0748e2807b4eefc80d67cc7cad 292 SUPERFAMILY SSF52540 1 152 1.1E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4092 b7a71d0748e2807b4eefc80d67cc7cad 292 Pfam PF03668 P-loop ATPase protein family 1 282 2.9E-99 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 Amet_0569 b236f02f989f1a7108ef505879a03171 87 SUPERFAMILY SSF55594 1 87 5.23E-24 T 12-10-2018 IPR035895 HPr-like superfamily Amet_0569 b236f02f989f1a7108ef505879a03171 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.3E-12 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_0569 b236f02f989f1a7108ef505879a03171 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.3E-12 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_0569 b236f02f989f1a7108ef505879a03171 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.3E-12 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_0569 b236f02f989f1a7108ef505879a03171 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Amet_0569 b236f02f989f1a7108ef505879a03171 87 Gene3D G3DSA:3.30.1340.10 1 87 1.2E-26 T 12-10-2018 IPR035895 HPr-like superfamily Amet_0569 b236f02f989f1a7108ef505879a03171 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 2.5E-25 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_0569 b236f02f989f1a7108ef505879a03171 87 Pfam PF00381 PTS HPr component phosphorylation site 5 82 1.7E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_3714 40e4f84201c0ea6b5ca4b11894117507 491 Pfam PF09992 Phosphodiester glycosidase 190 364 4.4E-25 T 12-10-2018 IPR018711 Phosphodiester glycosidase Amet_3714 40e4f84201c0ea6b5ca4b11894117507 491 SUPERFAMILY SSF55383 399 483 1.26E-25 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_3714 40e4f84201c0ea6b5ca4b11894117507 491 Pfam PF07833 Copper amine oxidase N-terminal domain 397 488 7.0E-30 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_3714 40e4f84201c0ea6b5ca4b11894117507 491 Gene3D G3DSA:3.30.457.10 400 478 1.9E-22 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_4727 a407baee817ad85045e9586cb38d6eb1 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 8.0E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4727 a407baee817ad85045e9586cb38d6eb1 467 SUPERFAMILY SSF46785 7 79 4.5E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4727 a407baee817ad85045e9586cb38d6eb1 467 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 7.8E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4727 a407baee817ad85045e9586cb38d6eb1 467 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 7.8E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4727 a407baee817ad85045e9586cb38d6eb1 467 Pfam PF00155 Aminotransferase class I and II 106 405 6.8E-20 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_4727 a407baee817ad85045e9586cb38d6eb1 467 SUPERFAMILY SSF53383 95 463 3.97E-78 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_4727 a407baee817ad85045e9586cb38d6eb1 467 SMART SM00345 18 77 4.1E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4727 a407baee817ad85045e9586cb38d6eb1 467 Gene3D G3DSA:3.40.640.10 92 456 1.1E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_4727 a407baee817ad85045e9586cb38d6eb1 467 Gene3D G3DSA:1.10.10.10 2 78 4.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 2.8E-27 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.1E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.1E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.1E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.1E-17 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 PIRSF PIRSF001535 1 570 9.2E-273 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 458 2.4E-50 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 Gene3D G3DSA:3.40.50.800 3 552 2.7E-250 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 SUPERFAMILY SSF55681 9 477 2.95E-100 T 12-10-2018 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 565 1.3E-211 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 SUPERFAMILY SSF55826 218 386 2.35E-30 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 Pfam PF03129 Anticodon binding domain 474 563 2.6E-18 T 12-10-2018 IPR004154 Anticodon-binding Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 568 39.761 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 Gene3D G3DSA:3.30.930.10 11 464 2.7E-250 T 12-10-2018 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 Gene3D G3DSA:3.90.960.10 240 388 2.7E-250 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amet_0674 17ed90f92ae87f99f5a596085bdfd4fc 570 SUPERFAMILY SSF52954 462 569 1.25E-29 T 12-10-2018 Amet_3383 30b5461465e542422893fce22c1448ae 346 SMART SM00859 3 142 3.8E-48 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Amet_3383 30b5461465e542422893fce22c1448ae 346 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 317 1.2E-28 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amet_3383 30b5461465e542422893fce22c1448ae 346 SUPERFAMILY SSF55347 150 314 1.2E-55 T 12-10-2018 Amet_3383 30b5461465e542422893fce22c1448ae 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 142 1.3E-31 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Amet_3383 30b5461465e542422893fce22c1448ae 346 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 340 43.814 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amet_3383 30b5461465e542422893fce22c1448ae 346 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 145 161 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amet_3383 30b5461465e542422893fce22c1448ae 346 Gene3D G3DSA:3.30.360.10 148 314 8.1E-134 T 12-10-2018 Amet_3383 30b5461465e542422893fce22c1448ae 346 Gene3D G3DSA:3.40.50.720 4 332 8.1E-134 T 12-10-2018 Amet_3383 30b5461465e542422893fce22c1448ae 346 SUPERFAMILY SSF51735 2 176 8.35E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3383 30b5461465e542422893fce22c1448ae 346 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 346 4.3E-138 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amet_2973 7feec02cfc3ebb8fcbe5b98e5bfc58f1 343 Gene3D G3DSA:2.40.100.10 179 318 1.1E-49 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Amet_2973 7feec02cfc3ebb8fcbe5b98e5bfc58f1 343 SUPERFAMILY SSF50891 180 296 7.96E-9 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Amet_2973 7feec02cfc3ebb8fcbe5b98e5bfc58f1 343 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 289 7.7E-94 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Amet_2973 7feec02cfc3ebb8fcbe5b98e5bfc58f1 343 SMART SM00797 25 306 5.8E-140 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Amet_2973 7feec02cfc3ebb8fcbe5b98e5bfc58f1 343 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 4 316 8.5E-100 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B Amet_4763 77e959a697f0e2c1fc307ba701236bfa 357 Pfam PF07261 Replication initiation and membrane attachment 241 305 1.2E-15 T 12-10-2018 IPR006343 DnaD domain Amet_4763 77e959a697f0e2c1fc307ba701236bfa 357 Pfam PF07261 Replication initiation and membrane attachment 149 220 1.2E-19 T 12-10-2018 IPR006343 DnaD domain Amet_4763 77e959a697f0e2c1fc307ba701236bfa 357 SUPERFAMILY SSF158499 146 213 3.79E-13 T 12-10-2018 IPR034829 DnaD-like domain superfamily Amet_4763 77e959a697f0e2c1fc307ba701236bfa 357 SUPERFAMILY SSF158499 234 298 4.45E-15 T 12-10-2018 IPR034829 DnaD-like domain superfamily Amet_4763 77e959a697f0e2c1fc307ba701236bfa 357 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 154 218 4.4E-9 T 12-10-2018 IPR006343 DnaD domain Amet_4763 77e959a697f0e2c1fc307ba701236bfa 357 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 242 304 8.9E-11 T 12-10-2018 IPR006343 DnaD domain Amet_4763 77e959a697f0e2c1fc307ba701236bfa 357 PIRSF PIRSF033722 1 356 7.8E-61 T 12-10-2018 IPR017019 Predicted DNA replication protein, bacterial Amet_4763 77e959a697f0e2c1fc307ba701236bfa 357 Gene3D G3DSA:1.10.10.630 142 218 1.2E-14 T 12-10-2018 IPR034829 DnaD-like domain superfamily Amet_4763 77e959a697f0e2c1fc307ba701236bfa 357 Gene3D G3DSA:1.10.10.630 234 305 6.9E-16 T 12-10-2018 IPR034829 DnaD-like domain superfamily Amet_0203 e276e0a94f8e66ab2e0b217608e7ca0a 405 Gene3D G3DSA:3.40.50.2000 1 221 4.3E-23 T 12-10-2018 Amet_0203 e276e0a94f8e66ab2e0b217608e7ca0a 405 Pfam PF13439 Glycosyltransferase Family 4 21 205 6.0E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amet_0203 e276e0a94f8e66ab2e0b217608e7ca0a 405 SUPERFAMILY SSF53756 2 404 9.03E-61 T 12-10-2018 Amet_0203 e276e0a94f8e66ab2e0b217608e7ca0a 405 Gene3D G3DSA:3.40.50.2000 222 389 3.8E-32 T 12-10-2018 Amet_0203 e276e0a94f8e66ab2e0b217608e7ca0a 405 Pfam PF00534 Glycosyl transferases group 1 215 383 2.1E-25 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Amet_3071 53265cafcc369c4a8e21c4b1ed89fca6 548 SUPERFAMILY SSF51556 60 499 1.44E-28 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_3071 53265cafcc369c4a8e21c4b1ed89fca6 548 SUPERFAMILY SSF51338 4 542 3.74E-14 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_3071 53265cafcc369c4a8e21c4b1ed89fca6 548 Gene3D G3DSA:3.10.310.70 79 203 3.5E-146 T 12-10-2018 Amet_3071 53265cafcc369c4a8e21c4b1ed89fca6 548 Pfam PF07969 Amidohydrolase family 49 540 1.1E-101 T 12-10-2018 IPR013108 Amidohydrolase 3 Amet_3071 53265cafcc369c4a8e21c4b1ed89fca6 548 Gene3D G3DSA:2.30.40.10 7 516 3.5E-146 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_3071 53265cafcc369c4a8e21c4b1ed89fca6 548 Gene3D G3DSA:3.20.20.140 61 499 3.5E-146 T 12-10-2018 Amet_3715 7f19310f869b4e36200224f11ad2c271 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 1.2E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_3715 7f19310f869b4e36200224f11ad2c271 201 SMART SM00421 140 197 7.9E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_3715 7f19310f869b4e36200224f11ad2c271 201 Gene3D G3DSA:3.40.50.12740 1 200 5.2E-68 T 12-10-2018 Amet_3715 7f19310f869b4e36200224f11ad2c271 201 SUPERFAMILY SSF52172 1 170 4.41E-35 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3715 7f19310f869b4e36200224f11ad2c271 201 Pfam PF00072 Response regulator receiver domain 3 114 2.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3715 7f19310f869b4e36200224f11ad2c271 201 SMART SM00448 1 114 2.1E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3715 7f19310f869b4e36200224f11ad2c271 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.8E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_3715 7f19310f869b4e36200224f11ad2c271 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.8E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_3715 7f19310f869b4e36200224f11ad2c271 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.8E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 SUPERFAMILY SSF50249 618 700 4.05E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Gene3D G3DSA:3.30.230.70 1 227 9.8E-79 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 SMART SM00322 549 614 4.0E-13 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 PIRSF PIRSF005499 1 702 4.8E-292 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 SMART SM00316 617 687 2.0E-23 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Pfam PF00013 KH domain 553 610 1.5E-10 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Pfam PF03725 3' exoribonuclease family, domain 2 456 524 8.2E-7 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 1.0E-13 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Gene3D G3DSA:3.30.230.70 230 546 1.0E-113 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 317 1.9E-8 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Gene3D G3DSA:2.40.50.140 619 689 1.5E-26 T 12-10-2018 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 SUPERFAMILY SSF54791 553 637 6.83E-23 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 SUPERFAMILY SSF55666 447 545 1.14E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 3.9E-19 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Pfam PF01138 3' exoribonuclease family, domain 1 320 453 9.9E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Gene3D G3DSA:3.30.1370.10 547 618 5.9E-19 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 SUPERFAMILY SSF54211 3 142 2.02E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 SUPERFAMILY SSF55666 143 232 3.27E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 SUPERFAMILY SSF54211 292 484 9.62E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 690 30.054 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 688 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 SUPERFAMILY SSF46915 237 318 3.4E-14 T 12-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1006 99248d7095f152f0df7fa1e8db203fea 702 Pfam PF00575 S1 RNA binding domain 617 687 4.0E-16 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 Gene3D G3DSA:3.40.120.10 630 732 8.5E-11 T 12-10-2018 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 Gene3D G3DSA:3.40.120.10 385 532 1.8E-26 T 12-10-2018 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 Gene3D G3DSA:3.30.310.50 741 823 5.4E-9 T 12-10-2018 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 SUPERFAMILY SSF53448 3 281 1.17E-76 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 252 284 4.0E-7 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 Pfam PF00483 Nucleotidyl transferase 5 233 1.3E-52 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 SUPERFAMILY SSF55957 735 822 1.26E-13 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 Gene3D G3DSA:3.40.120.10 550 725 8.5E-11 T 12-10-2018 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 SUPERFAMILY SSF53738 635 734 1.18E-5 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 Gene3D G3DSA:2.160.10.10 242 384 4.9E-20 T 12-10-2018 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 SUPERFAMILY SSF53738 378 518 1.37E-18 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 Gene3D G3DSA:3.90.550.10 3 241 7.2E-71 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 385 516 8.6E-18 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_3538 aa4ab98282e036f8480384556f6b9cc2 825 SUPERFAMILY SSF51161 240 383 5.13E-30 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 461 35.35 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 SUPERFAMILY SSF116878 128 461 7.32E-51 T 12-10-2018 Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 Gene3D G3DSA:3.40.50.300 224 388 1.4E-111 T 12-10-2018 Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 Gene3D G3DSA:1.20.120.430 128 461 1.4E-111 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 Pfam PF01926 50S ribosome-binding GTPase 226 338 1.3E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 373 7.4E-29 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 Pfam PF12631 MnmE helical domain 130 458 3.3E-60 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 461 7.1E-133 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 SUPERFAMILY SSF52540 79 378 1.91E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 127 1.6E-41 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Amet_4797 1e297f3d0f913df9c12d8e95e999bef7 461 Gene3D G3DSA:3.30.1360.120 1 127 1.4E-48 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Amet_4147 255e30c88eec961b09ce54947c4abdef 122 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 19 103 6.0E-44 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Amet_4147 255e30c88eec961b09ce54947c4abdef 122 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 105 1.6E-18 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amet_4147 255e30c88eec961b09ce54947c4abdef 122 SUPERFAMILY SSF56214 1 120 7.59E-29 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amet_4147 255e30c88eec961b09ce54947c4abdef 122 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 120 4.8E-26 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Amet_4147 255e30c88eec961b09ce54947c4abdef 122 Gene3D G3DSA:3.90.470.20 1 122 2.4E-38 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Amet_4147 255e30c88eec961b09ce54947c4abdef 122 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 120 8.1E-30 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Amet_4147 255e30c88eec961b09ce54947c4abdef 122 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 122 20.823 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Amet_4229 bd2c8fa1415f2d8c1c8d9ea770c3905f 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 277 1.5E-56 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amet_4229 bd2c8fa1415f2d8c1c8d9ea770c3905f 316 Gene3D G3DSA:3.40.50.720 22 302 7.3E-94 T 12-10-2018 Amet_4229 bd2c8fa1415f2d8c1c8d9ea770c3905f 316 SUPERFAMILY SSF51735 98 278 4.32E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4229 bd2c8fa1415f2d8c1c8d9ea770c3905f 316 Gene3D G3DSA:3.40.50.720 97 284 7.3E-94 T 12-10-2018 Amet_4229 bd2c8fa1415f2d8c1c8d9ea770c3905f 316 SUPERFAMILY SSF52283 11 126 1.79E-17 T 12-10-2018 Amet_4229 bd2c8fa1415f2d8c1c8d9ea770c3905f 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 103 4.5E-11 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Amet_2409 e0159e4078c5aa795077ea5504238d79 226 Pfam PF01844 HNH endonuclease 31 83 1.4E-4 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Amet_2409 e0159e4078c5aa795077ea5504238d79 226 Gene3D G3DSA:3.40.50.300 88 226 3.3E-7 T 12-10-2018 Amet_2409 e0159e4078c5aa795077ea5504238d79 226 SUPERFAMILY SSF52540 87 224 1.54E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2729 170740b209d25de018b84f88a6e7e112 400 Gene3D G3DSA:3.30.450.40 12 200 2.9E-17 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_2729 170740b209d25de018b84f88a6e7e112 400 SMART SM00065 39 193 0.0025 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_2729 170740b209d25de018b84f88a6e7e112 400 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 276 393 1.5E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2729 170740b209d25de018b84f88a6e7e112 400 Pfam PF01590 GAF domain 44 166 1.7E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_2729 170740b209d25de018b84f88a6e7e112 400 SUPERFAMILY SSF55874 223 394 2.88E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2729 170740b209d25de018b84f88a6e7e112 400 Gene3D G3DSA:3.30.565.10 234 398 1.1E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2729 170740b209d25de018b84f88a6e7e112 400 SUPERFAMILY SSF55781 43 194 1.79E-14 T 12-10-2018 Amet_2729 170740b209d25de018b84f88a6e7e112 400 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 391 5.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2729 170740b209d25de018b84f88a6e7e112 400 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 371 5.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2729 170740b209d25de018b84f88a6e7e112 400 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 336 5.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2729 170740b209d25de018b84f88a6e7e112 400 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 350 5.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2729 170740b209d25de018b84f88a6e7e112 400 SMART SM00387 273 394 4.2E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3089 0615ae26d04273251ee0c7d3708fc8c4 334 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 209 292 7.4E-35 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Amet_3089 0615ae26d04273251ee0c7d3708fc8c4 334 SUPERFAMILY SSF52402 7 203 2.23E-56 T 12-10-2018 Amet_3089 0615ae26d04273251ee0c7d3708fc8c4 334 SMART SM00893 9 198 1.8E-54 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_3089 0615ae26d04273251ee0c7d3708fc8c4 334 Pfam PF01012 Electron transfer flavoprotein domain 9 187 6.7E-50 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_3089 0615ae26d04273251ee0c7d3708fc8c4 334 Gene3D G3DSA:3.40.50.620 5 206 5.9E-79 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3089 0615ae26d04273251ee0c7d3708fc8c4 334 SUPERFAMILY SSF52467 209 328 5.14E-43 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amet_3089 0615ae26d04273251ee0c7d3708fc8c4 334 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 273 299 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Amet_3089 0615ae26d04273251ee0c7d3708fc8c4 334 Gene3D G3DSA:3.40.50.1220 207 334 5.6E-52 T 12-10-2018 Amet_3089 0615ae26d04273251ee0c7d3708fc8c4 334 PIRSF PIRSF000089 5 334 1.3E-114 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Amet_3602 e8bc457a3acf67d2b1957b87375b4352 351 Gene3D G3DSA:3.30.360.10 125 343 9.8E-125 T 12-10-2018 Amet_3602 e8bc457a3acf67d2b1957b87375b4352 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 3.5E-26 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amet_3602 e8bc457a3acf67d2b1957b87375b4352 351 Gene3D G3DSA:3.40.50.720 5 320 9.8E-125 T 12-10-2018 Amet_3602 e8bc457a3acf67d2b1957b87375b4352 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 227 7.2E-15 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amet_3602 e8bc457a3acf67d2b1957b87375b4352 351 SUPERFAMILY SSF51735 2 203 1.91E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 SMART SM00838 592 680 7.5E-48 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 SMART SM00889 474 590 2.4E-66 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 177 7.9E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 SUPERFAMILY SSF54211 476 591 1.37E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Pfam PF00679 Elongation factor G C-terminus 592 679 5.9E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 SUPERFAMILY SSF54980 595 683 1.81E-30 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Gene3D G3DSA:3.30.70.870 406 475 7.3E-21 T 12-10-2018 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 SUPERFAMILY SSF54980 399 476 9.35E-20 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 SUPERFAMILY SSF50447 259 398 1.31E-28 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Pfam PF00009 Elongation factor Tu GTP binding domain 8 275 1.5E-44 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 PRINTS PR00315 GTP-binding elongation factor signature 57 65 7.6E-9 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 PRINTS PR00315 GTP-binding elongation factor signature 11 24 7.6E-9 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 PRINTS PR00315 GTP-binding elongation factor signature 77 87 7.6E-9 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 PRINTS PR00315 GTP-binding elongation factor signature 93 104 7.6E-9 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 PRINTS PR00315 GTP-binding elongation factor signature 129 138 7.6E-9 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Gene3D G3DSA:2.40.30.10 284 405 9.6E-35 T 12-10-2018 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Gene3D G3DSA:3.30.230.10 478 680 8.0E-91 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Gene3D G3DSA:3.30.70.240 596 667 8.0E-91 T 12-10-2018 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Gene3D G3DSA:3.40.50.300 2 280 6.4E-83 T 12-10-2018 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Pfam PF03144 Elongation factor Tu domain 2 318 385 1.8E-8 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 SUPERFAMILY SSF52540 5 276 9.32E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Pfam PF14492 Elongation Factor G, domain II 400 470 6.3E-26 T 12-10-2018 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 Pfam PF03764 Elongation factor G, domain IV 473 590 9.5E-43 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Amet_4515 d6070078a60ed73c65d0bb672f715cc4 689 TIGRFAM TIGR00484 EF-G: translation elongation factor G 5 684 3.7E-221 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 Pfam PF01336 OB-fold nucleic acid binding domain 24 107 9.4E-16 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 7 588 34.78 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 562 1.1E-111 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 Pfam PF02938 GAD domain 315 409 7.8E-33 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 SUPERFAMILY SSF55681 114 587 1.79E-109 T 12-10-2018 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 Gene3D G3DSA:3.30.930.10 123 586 9.7E-201 T 12-10-2018 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 9.5E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 214 227 9.5E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 209 9.5E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 9.5E-27 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 6 587 1.9E-255 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 Gene3D G3DSA:3.30.1360.30 279 423 9.7E-201 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 Gene3D G3DSA:2.40.50.140 2 111 7.0E-33 T 12-10-2018 Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 SUPERFAMILY SSF50249 3 114 2.1E-31 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2359 a46229da6c6b41483c1374d7769e88bb 591 SUPERFAMILY SSF55261 296 422 8.18E-44 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Amet_2521 91cc11eb22150b5431084cdd5b7fe380 182 SUPERFAMILY SSF55811 6 172 2.03E-50 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amet_2521 91cc11eb22150b5431084cdd5b7fe380 182 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 169 1.8E-24 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 Amet_2521 91cc11eb22150b5431084cdd5b7fe380 182 Pfam PF00293 NUDIX domain 43 154 2.7E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amet_2521 91cc11eb22150b5431084cdd5b7fe380 182 ProSitePatterns PS00893 Nudix box signature. 76 97 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amet_2521 91cc11eb22150b5431084cdd5b7fe380 182 Gene3D G3DSA:3.90.79.10 3 181 6.4E-57 T 12-10-2018 Amet_0039 2b5fda030b64159fbcf9356c83439a55 402 Pfam PF07687 Peptidase dimerisation domain 185 293 2.3E-20 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Amet_0039 2b5fda030b64159fbcf9356c83439a55 402 Gene3D G3DSA:3.30.70.360 187 316 3.9E-107 T 12-10-2018 Amet_0039 2b5fda030b64159fbcf9356c83439a55 402 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 83 92 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Amet_0039 2b5fda030b64159fbcf9356c83439a55 402 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 21 391 1.9E-85 T 12-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase Amet_0039 2b5fda030b64159fbcf9356c83439a55 402 SUPERFAMILY SSF55031 187 303 4.84E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_0039 2b5fda030b64159fbcf9356c83439a55 402 Gene3D G3DSA:3.40.630.10 32 399 3.9E-107 T 12-10-2018 Amet_0039 2b5fda030b64159fbcf9356c83439a55 402 Pfam PF01546 Peptidase family M20/M25/M40 84 396 1.9E-30 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_0039 2b5fda030b64159fbcf9356c83439a55 402 SUPERFAMILY SSF53187 16 400 1.5E-59 T 12-10-2018 Amet_3956 f30ae513fb8df6283c448c2616932e6f 227 Gene3D G3DSA:1.10.10.10 127 226 1.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3956 f30ae513fb8df6283c448c2616932e6f 227 Gene3D G3DSA:3.40.50.2300 1 126 3.1E-31 T 12-10-2018 Amet_3956 f30ae513fb8df6283c448c2616932e6f 227 Pfam PF00072 Response regulator receiver domain 5 113 3.5E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3956 f30ae513fb8df6283c448c2616932e6f 227 SUPERFAMILY SSF46894 125 223 5.95E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_3956 f30ae513fb8df6283c448c2616932e6f 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 1.6E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3956 f30ae513fb8df6283c448c2616932e6f 227 SMART SM00448 3 113 1.7E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3956 f30ae513fb8df6283c448c2616932e6f 227 SUPERFAMILY SSF52172 1 127 9.25E-37 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3956 f30ae513fb8df6283c448c2616932e6f 227 SMART SM00862 149 224 4.9E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_4600 394681d39120fbc1b45df30b86631cf7 526 PIRSF PIRSF005690 17 517 9.1E-189 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_4600 394681d39120fbc1b45df30b86631cf7 526 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 32 501 1.1E-196 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_1954 c167797437d2a8c948b2da4e4e590e77 260 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 145 250 8.2E-20 T 12-10-2018 IPR006528 Phage head morphogenesis domain Amet_1954 c167797437d2a8c948b2da4e4e590e77 260 Pfam PF04233 Phage Mu protein F like protein 143 250 4.4E-16 T 12-10-2018 IPR006528 Phage head morphogenesis domain Amet_0417 c167797437d2a8c948b2da4e4e590e77 260 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 145 250 8.2E-20 T 12-10-2018 IPR006528 Phage head morphogenesis domain Amet_0417 c167797437d2a8c948b2da4e4e590e77 260 Pfam PF04233 Phage Mu protein F like protein 143 250 4.4E-16 T 12-10-2018 IPR006528 Phage head morphogenesis domain Amet_4364 c167797437d2a8c948b2da4e4e590e77 260 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 145 250 8.2E-20 T 12-10-2018 IPR006528 Phage head morphogenesis domain Amet_4364 c167797437d2a8c948b2da4e4e590e77 260 Pfam PF04233 Phage Mu protein F like protein 143 250 4.4E-16 T 12-10-2018 IPR006528 Phage head morphogenesis domain Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 SUPERFAMILY SSF82866 793 1009 7.46E-49 T 12-10-2018 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 SUPERFAMILY SSF82693 45 134 1.4E-16 T 12-10-2018 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 Pfam PF00873 AcrB/AcrD/AcrF family 5 1006 2.0E-173 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 Gene3D G3DSA:3.30.2090.10 706 792 1.3E-254 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 SUPERFAMILY SSF82693 143 321 2.96E-11 T 12-10-2018 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 SUPERFAMILY SSF82866 294 493 2.49E-38 T 12-10-2018 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 Gene3D G3DSA:1.20.1640.10 12 507 1.3E-254 T 12-10-2018 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 Gene3D G3DSA:3.30.2090.10 181 272 1.3E-254 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 Gene3D G3DSA:3.30.70.1440 655 849 1.3E-254 T 12-10-2018 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 8.7E-29 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 8.7E-29 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 8.7E-29 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 8.7E-29 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 8.7E-29 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 PRINTS PR00702 Acriflavin resistance protein family signature 536 553 8.7E-29 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 8.7E-29 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 Gene3D G3DSA:3.30.70.1320 138 329 1.3E-254 T 12-10-2018 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 Gene3D G3DSA:3.30.70.1430 42 800 1.3E-254 T 12-10-2018 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 SUPERFAMILY SSF82714 707 789 1.2E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 SUPERFAMILY SSF82714 186 268 8.24E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 Gene3D G3DSA:1.20.1640.10 508 1003 1.3E-254 T 12-10-2018 Amet_1341 3566c6208da119ac500a111f8b0ff147 1023 Gene3D G3DSA:3.30.70.1430 551 654 1.3E-254 T 12-10-2018 Amet_4744 5b8fe8cfb15ad8c38a67ac49c18d1afb 221 Gene3D G3DSA:3.40.50.300 2 220 2.1E-62 T 12-10-2018 Amet_4744 5b8fe8cfb15ad8c38a67ac49c18d1afb 221 SUPERFAMILY SSF52540 3 218 8.91E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4744 5b8fe8cfb15ad8c38a67ac49c18d1afb 221 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4744 5b8fe8cfb15ad8c38a67ac49c18d1afb 221 Pfam PF00005 ABC transporter 21 167 1.0E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4744 5b8fe8cfb15ad8c38a67ac49c18d1afb 221 SMART SM00382 30 216 3.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1628 d64766af0a962d4ea322351c02db48d8 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 292 36.195 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Amet_1628 d64766af0a962d4ea322351c02db48d8 292 Gene3D G3DSA:3.55.30.10 1 237 3.9E-80 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Amet_1628 d64766af0a962d4ea322351c02db48d8 292 PIRSF PIRSF005261 1 292 2.0E-77 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Amet_1628 d64766af0a962d4ea322351c02db48d8 292 Pfam PF01430 Hsp33 protein 4 281 1.1E-83 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Amet_1628 d64766af0a962d4ea322351c02db48d8 292 SUPERFAMILY SSF118352 233 291 2.35E-18 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Amet_1628 d64766af0a962d4ea322351c02db48d8 292 Gene3D G3DSA:3.90.1280.10 238 292 3.0E-21 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Amet_1628 d64766af0a962d4ea322351c02db48d8 292 SUPERFAMILY SSF64397 4 241 1.57E-67 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Amet_0649 d28ce60619b8ee839903519244858271 380 PIRSF PIRSF001456 1 377 7.7E-134 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amet_0649 d28ce60619b8ee839903519244858271 380 Pfam PF01264 Chorismate synthase 2 359 6.2E-124 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amet_0649 d28ce60619b8ee839903519244858271 380 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amet_0649 d28ce60619b8ee839903519244858271 380 Gene3D G3DSA:3.60.150.10 1 380 6.7E-157 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amet_0649 d28ce60619b8ee839903519244858271 380 SUPERFAMILY SSF103263 1 378 9.42E-144 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amet_0649 d28ce60619b8ee839903519244858271 380 ProSitePatterns PS00788 Chorismate synthase signature 2. 127 143 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amet_0649 d28ce60619b8ee839903519244858271 380 TIGRFAM TIGR00033 aroC: chorismate synthase 2 364 1.0E-130 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amet_0649 d28ce60619b8ee839903519244858271 380 Hamap MF_00300 Chorismate synthase [aroC]. 2 366 36.548 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 377 3.3E-55 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 SUPERFAMILY SSF47203 227 379 4.35E-62 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 Gene3D G3DSA:1.20.140.10 235 379 1.3E-60 T 12-10-2018 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 SUPERFAMILY SSF56645 2 242 2.09E-90 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 Gene3D G3DSA:2.40.110.10 121 234 9.1E-45 T 12-10-2018 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 Gene3D G3DSA:1.10.540.10 1 120 1.7E-44 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 PIRSF PIRSF016578 127 379 1.4E-15 T 12-10-2018 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 PIRSF PIRSF016578 6 107 1.8E-8 T 12-10-2018 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 3.0E-28 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Amet_3091 6c9b4619b5f9ed30d5e27bfc7349cd6a 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 2.5E-38 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Amet_3999 e29e4d97b870936ba443adcda72adb43 112 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 1.4E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_3999 e29e4d97b870936ba443adcda72adb43 112 Gene3D G3DSA:1.10.10.10 1 92 2.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3999 e29e4d97b870936ba443adcda72adb43 112 SMART SM00418 5 86 3.3E-23 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_3999 e29e4d97b870936ba443adcda72adb43 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.8E-18 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_3999 e29e4d97b870936ba443adcda72adb43 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 37 1.8E-18 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_3999 e29e4d97b870936ba443adcda72adb43 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 1.8E-18 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_3999 e29e4d97b870936ba443adcda72adb43 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.8E-18 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_3999 e29e4d97b870936ba443adcda72adb43 112 SUPERFAMILY SSF46785 1 88 1.41E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1553 3dbce8b7ad36650c20be6d3943d5dad7 579 SUPERFAMILY SSF52540 2 235 6.32E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1553 3dbce8b7ad36650c20be6d3943d5dad7 579 Pfam PF00005 ABC transporter 345 472 2.3E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1553 3dbce8b7ad36650c20be6d3943d5dad7 579 Pfam PF00005 ABC transporter 18 184 4.6E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1553 3dbce8b7ad36650c20be6d3943d5dad7 579 Gene3D G3DSA:3.40.50.300 320 529 1.3E-42 T 12-10-2018 Amet_1553 3dbce8b7ad36650c20be6d3943d5dad7 579 SUPERFAMILY SSF52540 327 519 8.79E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1553 3dbce8b7ad36650c20be6d3943d5dad7 579 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1553 3dbce8b7ad36650c20be6d3943d5dad7 579 SMART SM00382 354 536 1.9E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1553 3dbce8b7ad36650c20be6d3943d5dad7 579 SMART SM00382 26 231 7.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1553 3dbce8b7ad36650c20be6d3943d5dad7 579 Gene3D G3DSA:3.40.50.300 1 295 7.1E-46 T 12-10-2018 Amet_2097 c71bf08e956eda88598824ec609e48be 226 SUPERFAMILY SSF47644 9 81 3.53E-14 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2097 c71bf08e956eda88598824ec609e48be 226 Pfam PF02607 B12 binding domain 12 80 2.2E-10 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2097 c71bf08e956eda88598824ec609e48be 226 Gene3D G3DSA:3.40.50.280 86 222 1.5E-43 T 12-10-2018 Amet_2097 c71bf08e956eda88598824ec609e48be 226 Gene3D G3DSA:1.10.1240.10 10 84 4.1E-19 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2097 c71bf08e956eda88598824ec609e48be 226 SUPERFAMILY SSF52242 88 219 1.09E-38 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_2097 c71bf08e956eda88598824ec609e48be 226 SMART SM01018 9 91 3.0E-17 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2097 c71bf08e956eda88598824ec609e48be 226 Pfam PF02310 B12 binding domain 99 192 1.1E-21 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_4415 9028fa894854713aa903e48d9bc36b52 480 Pfam PF02386 Cation transport protein 43 471 5.6E-65 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Amet_4415 9028fa894854713aa903e48d9bc36b52 480 PIRSF PIRSF006247 1 479 2.3E-177 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Amet_4415 9028fa894854713aa903e48d9bc36b52 480 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 83 462 1.7E-99 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Amet_2149 7e9abfe528d558f85ef96424cbcb2886 167 Pfam PF08281 Sigma-70, region 4 105 157 4.9E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2149 7e9abfe528d558f85ef96424cbcb2886 167 Pfam PF04542 Sigma-70 region 2 9 75 4.3E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2149 7e9abfe528d558f85ef96424cbcb2886 167 Gene3D G3DSA:1.10.10.10 92 164 1.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2149 7e9abfe528d558f85ef96424cbcb2886 167 SUPERFAMILY SSF88946 5 79 2.88E-20 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2149 7e9abfe528d558f85ef96424cbcb2886 167 SUPERFAMILY SSF88659 99 161 1.53E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2149 7e9abfe528d558f85ef96424cbcb2886 167 Gene3D G3DSA:1.10.1740.10 2 91 6.3E-23 T 12-10-2018 Amet_2149 7e9abfe528d558f85ef96424cbcb2886 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 161 5.7E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 755 1011 8.6E-30 T 12-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 Gene3D G3DSA:3.90.1570.50 112 263 6.0E-37 T 12-10-2018 Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 13 729 2.1E-92 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 Pfam PF04851 Type III restriction enzyme, res subunit 271 442 3.3E-24 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 Gene3D G3DSA:3.40.50.300 532 752 1.8E-46 T 12-10-2018 Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 Gene3D G3DSA:3.40.50.300 271 474 6.4E-51 T 12-10-2018 Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 Gene3D G3DSA:1.20.58.910 753 841 3.4E-7 T 12-10-2018 Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 37 212 2.0E-16 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 SUPERFAMILY SSF52540 271 445 1.26E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1609 f03905cd02e336d70f7d548bbc16b239 1027 SMART SM00487 268 477 2.0E-15 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 SUPERFAMILY SSF52540 5 396 4.87E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 PRINTS PR00906 SecA protein signature 320 342 5.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 PRINTS PR00906 SecA protein signature 169 189 5.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 PRINTS PR00906 SecA protein signature 394 407 5.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 PRINTS PR00906 SecA protein signature 62 86 5.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 PRINTS PR00906 SecA protein signature 100 114 5.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 PRINTS PR00906 SecA protein signature 357 374 5.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 PRINTS PR00906 SecA protein signature 116 126 5.7E-69 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 825 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 Pfam PF07517 SecA DEAD-like domain 6 383 2.6E-133 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 SMART SM00957 5 383 1.7E-284 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 SUPERFAMILY SSF81886 629 881 2.49E-79 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 SUPERFAMILY SSF52540 398 627 1.72E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 Gene3D G3DSA:3.40.50.300 399 628 1.6E-88 T 12-10-2018 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 ProSitePatterns PS01312 SecA family signature. 481 496 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 Pfam PF07516 SecA Wing and Scaffold domain 626 836 2.0E-69 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 839 19.967 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 SUPERFAMILY SSF81767 226 349 9.68E-44 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 Gene3D G3DSA:1.10.3060.10 630 839 6.6E-74 T 12-10-2018 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 Gene3D G3DSA:3.90.1440.10 228 349 1.5E-180 T 12-10-2018 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 Pfam PF01043 SecA preprotein cross-linking domain 231 339 1.1E-39 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 SMART SM00958 227 339 1.0E-64 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 Gene3D G3DSA:3.40.50.300 21 396 1.5E-180 T 12-10-2018 Amet_0790 48eab9c774bbbf824e37b4b9853e128e 891 Pfam PF02810 SEC-C motif 873 890 2.8E-10 T 12-10-2018 IPR004027 SEC-C motif Amet_1138 57f247661fbd57eaae94620a64efdac0 253 Gene3D G3DSA:1.10.10.60 195 252 5.7E-19 T 12-10-2018 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 216 231 8.5E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 231 247 8.5E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 SMART SM00448 2 116 7.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 Gene3D G3DSA:1.10.10.60 142 194 4.7E-14 T 12-10-2018 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 SMART SM00342 162 247 4.5E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 Pfam PF12833 Helix-turn-helix domain 168 248 3.5E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 Gene3D G3DSA:3.40.50.2300 2 140 1.3E-33 T 12-10-2018 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 Pfam PF00072 Response regulator receiver domain 4 114 1.3E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 SUPERFAMILY SSF46689 198 250 4.93E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1138 57f247661fbd57eaae94620a64efdac0 253 SUPERFAMILY SSF52172 1 137 2.13E-33 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3829 cddce32f49728ec53047bb75545d4e3e 87 SUPERFAMILY SSF159133 1 82 3.27E-25 T 12-10-2018 IPR036677 EutN/Ccml superfamily Amet_3829 cddce32f49728ec53047bb75545d4e3e 87 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 81 1.0E-23 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Amet_3829 cddce32f49728ec53047bb75545d4e3e 87 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 81 2.2E-27 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Amet_3829 cddce32f49728ec53047bb75545d4e3e 87 Gene3D G3DSA:2.40.50.220 1 87 6.0E-28 T 12-10-2018 IPR036677 EutN/Ccml superfamily Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 ProSitePatterns PS01014 Transcription termination factor nusG signature. 155 164 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 Gene3D G3DSA:3.30.70.940 1 115 1.4E-44 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 Gene3D G3DSA:2.30.30.30 116 171 4.7E-23 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 SUPERFAMILY SSF50104 116 171 2.97E-17 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 SUPERFAMILY SSF82679 5 108 1.09E-39 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 PRINTS PR00338 Transcription termination factor NUSG signature 130 145 5.5E-17 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 PRINTS PR00338 Transcription termination factor NUSG signature 59 71 5.5E-17 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 PRINTS PR00338 Transcription termination factor NUSG signature 148 164 5.5E-17 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 SMART SM00739 118 145 0.003 T 12-10-2018 IPR005824 KOW Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 7 171 1.6E-60 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 SMART SM00738 4 112 7.2E-44 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 Pfam PF02357 Transcription termination factor nusG 6 108 2.8E-30 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_4491 984bb12c9e758ba64a081102c3e689c9 172 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 4 172 23.6 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 Pfam PF10531 SLBB domain 288 335 4.4E-13 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 SUPERFAMILY SSF46548 325 437 2.35E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 442 158.756 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 Gene3D G3DSA:3.40.50.11540 134 283 2.3E-15 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 129 274 6.5E-56 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 436 1.2E-172 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 103 2.9E-36 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 Pfam PF13183 4Fe-4S dicluster domain 365 420 9.2E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 SUPERFAMILY SSF142019 85 294 4.58E-63 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 406 417 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_2280 1435c9b6e4e84598515da55856ad9d11 442 Gene3D G3DSA:1.10.1060.10 356 434 4.9E-9 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_0516 8b0b8e9264e329b9a1db2f4373919ef5 248 Gene3D G3DSA:3.40.50.300 1 248 2.4E-61 T 12-10-2018 Amet_0516 8b0b8e9264e329b9a1db2f4373919ef5 248 SUPERFAMILY SSF52540 1 238 1.36E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0516 8b0b8e9264e329b9a1db2f4373919ef5 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0516 8b0b8e9264e329b9a1db2f4373919ef5 248 Pfam PF00005 ABC transporter 19 173 2.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0516 8b0b8e9264e329b9a1db2f4373919ef5 248 SMART SM00382 27 222 8.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0516 8b0b8e9264e329b9a1db2f4373919ef5 248 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 2.0E-97 T 12-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 Amet_0452 0f9a64f633b043dd55e46514237772c7 256 SUPERFAMILY SSF46565 190 250 1.57E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Amet_0452 0f9a64f633b043dd55e46514237772c7 256 Gene3D G3DSA:1.10.287.110 174 252 8.2E-18 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Amet_0452 0f9a64f633b043dd55e46514237772c7 256 Pfam PF00226 DnaJ domain 197 249 2.2E-16 T 12-10-2018 IPR001623 DnaJ domain Amet_0452 0f9a64f633b043dd55e46514237772c7 256 PRINTS PR00625 DnaJ domain signature 214 229 3.8E-12 T 12-10-2018 IPR001623 DnaJ domain Amet_0452 0f9a64f633b043dd55e46514237772c7 256 PRINTS PR00625 DnaJ domain signature 196 214 3.8E-12 T 12-10-2018 IPR001623 DnaJ domain Amet_0452 0f9a64f633b043dd55e46514237772c7 256 PRINTS PR00625 DnaJ domain signature 230 250 3.8E-12 T 12-10-2018 IPR001623 DnaJ domain Amet_0452 0f9a64f633b043dd55e46514237772c7 256 SMART SM00271 193 250 4.0E-17 T 12-10-2018 IPR001623 DnaJ domain Amet_2302 b7e658e77a78cff75fa0c8b6fd207a6c 500 Pfam PF10150 Ribonuclease E/G family 121 390 5.0E-103 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Amet_2302 b7e658e77a78cff75fa0c8b6fd207a6c 500 SMART SM00316 36 119 2.9E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_2302 b7e658e77a78cff75fa0c8b6fd207a6c 500 Gene3D G3DSA:2.40.50.140 30 125 1.5E-32 T 12-10-2018 Amet_2302 b7e658e77a78cff75fa0c8b6fd207a6c 500 SUPERFAMILY SSF50249 38 125 1.37E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2302 b7e658e77a78cff75fa0c8b6fd207a6c 500 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 12 422 1.2E-151 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Amet_0073 d7a029e2b0e397ce88efa71bb10267a9 240 Gene3D G3DSA:3.30.950.10 129 237 1.3E-15 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amet_0073 d7a029e2b0e397ce88efa71bb10267a9 240 SUPERFAMILY SSF53790 1 231 9.55E-40 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amet_0073 d7a029e2b0e397ce88efa71bb10267a9 240 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 213 7.0E-47 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amet_0073 d7a029e2b0e397ce88efa71bb10267a9 240 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 229 6.9E-64 T 12-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 Amet_0073 d7a029e2b0e397ce88efa71bb10267a9 240 PIRSF PIRSF036427 1 237 5.0E-66 T 12-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 Amet_0073 d7a029e2b0e397ce88efa71bb10267a9 240 Gene3D G3DSA:3.40.1010.10 1 128 1.4E-32 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 125 706 7.4E-257 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 SUPERFAMILY SSF52540 198 380 5.14E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Pfam PF11987 Translation-initiation factor 2 494 598 4.6E-38 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Gene3D G3DSA:2.40.30.10 380 497 9.2E-39 T 12-10-2018 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 135 180 5.5E-10 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 50 1.3E-14 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Gene3D G3DSA:3.40.50.10050 502 609 2.1E-39 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Gene3D G3DSA:3.40.50.300 205 379 1.6E-73 T 12-10-2018 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Gene3D G3DSA:1.10.10.2480 1 68 3.1E-20 T 12-10-2018 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 SUPERFAMILY SSF52156 488 615 5.23E-37 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 ProSitePatterns PS01176 Initiation factor 2 signature. 659 681 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 SUPERFAMILY SSF50447 381 463 7.46E-25 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 SUPERFAMILY SSF50447 610 706 1.87E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 706 17.059 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Gene3D G3DSA:2.40.30.10 610 706 4.0E-32 T 12-10-2018 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 210 367 6.0E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_2673 f2ff7a78ffb1144352ed3ab97438eaef 706 Pfam PF00009 Elongation factor Tu GTP binding domain 213 368 2.2E-35 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4313 bc3d639802f7bf48e9249eee5f48d1fe 274 SUPERFAMILY SSF143597 41 243 3.66E-70 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Amet_4313 bc3d639802f7bf48e9249eee5f48d1fe 274 Gene3D G3DSA:3.40.1700.10 104 256 1.0E-61 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Amet_4313 bc3d639802f7bf48e9249eee5f48d1fe 274 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 14 258 3.2E-80 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Amet_4313 bc3d639802f7bf48e9249eee5f48d1fe 274 PIRSF PIRSF004793 6 268 1.7E-94 T 12-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 Amet_4313 bc3d639802f7bf48e9249eee5f48d1fe 274 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 120 238 1.8E-45 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Amet_4313 bc3d639802f7bf48e9249eee5f48d1fe 274 Hamap MF_01499 Diadenylate cyclase [dacA]. 6 256 34.671 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Amet_3685 0af37ae4087e03e13b091472df0efb77 555 Pfam PF00395 S-layer homology domain 161 206 3.0E-6 T 12-10-2018 IPR001119 S-layer homology domain Amet_3685 0af37ae4087e03e13b091472df0efb77 555 Pfam PF00395 S-layer homology domain 31 74 1.3E-10 T 12-10-2018 IPR001119 S-layer homology domain Amet_3685 0af37ae4087e03e13b091472df0efb77 555 Pfam PF00395 S-layer homology domain 94 139 7.1E-7 T 12-10-2018 IPR001119 S-layer homology domain Amet_3685 0af37ae4087e03e13b091472df0efb77 555 SMART SM00636 220 541 8.3E-15 T 12-10-2018 IPR011583 Chitinase II GO:0008061 Amet_3685 0af37ae4087e03e13b091472df0efb77 555 Pfam PF00704 Glycosyl hydrolases family 18 235 539 1.2E-28 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Amet_3685 0af37ae4087e03e13b091472df0efb77 555 Gene3D G3DSA:3.20.20.80 284 541 9.0E-46 T 12-10-2018 Amet_3685 0af37ae4087e03e13b091472df0efb77 555 SUPERFAMILY SSF51445 232 539 6.32E-39 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_3685 0af37ae4087e03e13b091472df0efb77 555 Gene3D G3DSA:3.10.50.10 443 512 9.0E-46 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily Amet_0015 3f3ad64497a3766b49e2817cb539d084 447 PIRSF PIRSF006815 2 447 6.3E-185 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Amet_0015 3f3ad64497a3766b49e2817cb539d084 447 Pfam PF02347 Glycine cleavage system P-protein 4 442 2.2E-136 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Amet_0015 3f3ad64497a3766b49e2817cb539d084 447 Gene3D G3DSA:3.90.1150.10 72 441 7.3E-160 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0015 3f3ad64497a3766b49e2817cb539d084 447 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 2 446 46.532 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Amet_0015 3f3ad64497a3766b49e2817cb539d084 447 Gene3D G3DSA:3.40.640.10 83 348 7.3E-160 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0015 3f3ad64497a3766b49e2817cb539d084 447 SUPERFAMILY SSF53383 3 446 5.64E-107 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 8.5E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 8.5E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 8.5E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 8.5E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 8.5E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Gene3D G3DSA:3.10.20.30 3 66 6.8E-20 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 634 35.519 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Pfam PF03129 Anticodon binding domain 541 627 3.8E-22 T 12-10-2018 IPR004154 Anticodon-binding Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Gene3D G3DSA:3.30.930.10 224 531 1.2E-133 T 12-10-2018 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Gene3D G3DSA:3.30.54.20 132 188 5.4E-67 T 12-10-2018 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 SMART SM00863 171 220 7.4E-26 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 631 1.6E-230 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 SUPERFAMILY SSF52954 529 633 1.96E-30 T 12-10-2018 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Gene3D G3DSA:3.40.50.800 532 636 8.0E-33 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Gene3D G3DSA:3.30.980.10 71 222 5.4E-67 T 12-10-2018 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 SUPERFAMILY SSF81271 4 63 6.54E-13 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 SUPERFAMILY SSF55186 69 242 9.42E-64 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Pfam PF02824 TGS domain 4 62 5.8E-10 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 220 4.2E-16 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 SUPERFAMILY SSF55681 244 526 3.5E-98 T 12-10-2018 Amet_1631 9a3ba6ec1d8794d734e96d3beafa94b5 636 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 324 529 4.0E-38 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2052 f613d34f66d5f72a8b959d59a3fc7b64 378 SUPERFAMILY SSF53383 65 371 1.03E-18 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2052 f613d34f66d5f72a8b959d59a3fc7b64 378 Gene3D G3DSA:3.40.640.10 52 265 1.8E-12 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 PRINTS PR00409 Phthalate dioxygenase reductase family signature 109 128 5.8E-5 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 PRINTS PR00409 Phthalate dioxygenase reductase family signature 182 190 5.8E-5 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 211 253 2.0E-20 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 4 255 34.011 T 12-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 SUPERFAMILY SSF63380 5 99 9.14E-23 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 SUPERFAMILY SSF52343 94 253 2.88E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 Gene3D G3DSA:2.40.30.10 2 97 5.4E-28 T 12-10-2018 Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 Gene3D G3DSA:3.40.50.80 102 210 1.0E-20 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 Gene3D G3DSA:2.10.240.10 211 254 1.9E-19 T 12-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 Pfam PF00970 Oxidoreductase FAD-binding domain 9 97 2.6E-5 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Amet_4209 178553a3d0040b1140e6b614c8d1947c 257 PIRSF PIRSF006816 2 257 6.8E-67 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Amet_3807 e2c6f21659aa2ee1db3453329e06f425 583 SUPERFAMILY SSF90123 21 324 7.85E-46 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_3807 e2c6f21659aa2ee1db3453329e06f425 583 Pfam PF00664 ABC transporter transmembrane region 23 285 8.6E-24 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amet_3807 e2c6f21659aa2ee1db3453329e06f425 583 Gene3D G3DSA:1.20.1560.10 13 324 7.0E-38 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_3807 e2c6f21659aa2ee1db3453329e06f425 583 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3807 e2c6f21659aa2ee1db3453329e06f425 583 Gene3D G3DSA:3.40.50.300 327 580 1.1E-86 T 12-10-2018 Amet_3807 e2c6f21659aa2ee1db3453329e06f425 583 SUPERFAMILY SSF52540 331 575 2.45E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3807 e2c6f21659aa2ee1db3453329e06f425 583 SMART SM00382 365 551 7.5E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3807 e2c6f21659aa2ee1db3453329e06f425 583 Pfam PF00005 ABC transporter 357 505 2.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1547 c2a2b34aa170983bd4279f7c6129e687 465 Gene3D G3DSA:1.10.10.10 2 78 1.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1547 c2a2b34aa170983bd4279f7c6129e687 465 SUPERFAMILY SSF46785 9 81 1.17E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1547 c2a2b34aa170983bd4279f7c6129e687 465 Pfam PF00155 Aminotransferase class I and II 106 407 2.0E-20 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_1547 c2a2b34aa170983bd4279f7c6129e687 465 SUPERFAMILY SSF53383 102 464 1.41E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_1547 c2a2b34aa170983bd4279f7c6129e687 465 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 6.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1547 c2a2b34aa170983bd4279f7c6129e687 465 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 6.4E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1547 c2a2b34aa170983bd4279f7c6129e687 465 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 1.0E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1547 c2a2b34aa170983bd4279f7c6129e687 465 Gene3D G3DSA:3.40.640.10 93 459 2.8E-118 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_1547 c2a2b34aa170983bd4279f7c6129e687 465 SMART SM00345 18 77 9.0E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0393 73abe5a50c9a744a8c24142610b79c9b 85 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 10 50 1.7E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_0393 73abe5a50c9a744a8c24142610b79c9b 85 SUPERFAMILY SSF89447 7 54 1.69E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Amet_0393 73abe5a50c9a744a8c24142610b79c9b 85 SMART SM00966 10 53 3.5E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_0393 73abe5a50c9a744a8c24142610b79c9b 85 Gene3D G3DSA:2.10.260.10 5 57 1.0E-8 T 12-10-2018 Amet_4389 73abe5a50c9a744a8c24142610b79c9b 85 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 10 50 1.7E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_4389 73abe5a50c9a744a8c24142610b79c9b 85 SUPERFAMILY SSF89447 7 54 1.69E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Amet_4389 73abe5a50c9a744a8c24142610b79c9b 85 SMART SM00966 10 53 3.5E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_4389 73abe5a50c9a744a8c24142610b79c9b 85 Gene3D G3DSA:2.10.260.10 5 57 1.0E-8 T 12-10-2018 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 SUPERFAMILY SSF50447 263 400 1.94E-36 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Pfam PF03144 Elongation factor Tu domain 2 322 389 3.0E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 SUPERFAMILY SSF54211 477 597 3.54E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Gene3D G3DSA:3.30.70.240 602 672 9.4E-93 T 12-10-2018 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Gene3D G3DSA:3.30.70.870 404 481 6.2E-31 T 12-10-2018 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 SUPERFAMILY SSF54980 402 479 2.55E-24 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Pfam PF03764 Elongation factor G, domain IV 477 596 3.1E-46 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 111.886 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 SMART SM00838 598 685 2.3E-62 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Pfam PF14492 Elongation Factor G, domain II 402 476 1.9E-33 T 12-10-2018 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Pfam PF00679 Elongation factor G C-terminus 599 684 9.2E-33 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 2.8E-35 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 687 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 SUPERFAMILY SSF52540 6 280 3.51E-107 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 SUPERFAMILY SSF54980 601 687 5.28E-32 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.9E-16 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 9.0E-63 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Gene3D G3DSA:3.30.230.10 482 685 9.4E-93 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 SMART SM00889 478 596 7.3E-70 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Gene3D G3DSA:2.40.30.10 292 403 1.7E-45 T 12-10-2018 Amet_4481 fa445f79c0b95190a00bc6a741f5ec46 689 Gene3D G3DSA:3.40.50.300 2 291 5.8E-106 T 12-10-2018 Amet_4093 86a83475661e485af3114abc8b461d8b 304 Gene3D G3DSA:3.30.465.10 92 218 1.8E-39 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_4093 86a83475661e485af3114abc8b461d8b 304 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 304 89.083 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4093 86a83475661e485af3114abc8b461d8b 304 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 25 302 1.3E-74 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4093 86a83475661e485af3114abc8b461d8b 304 Pfam PF01565 FAD binding domain 38 168 9.9E-25 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amet_4093 86a83475661e485af3114abc8b461d8b 304 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 203 301 2.4E-28 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4093 86a83475661e485af3114abc8b461d8b 304 Gene3D G3DSA:3.30.43.10 6 89 2.9E-27 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Amet_4093 86a83475661e485af3114abc8b461d8b 304 Gene3D G3DSA:3.90.78.10 219 304 4.7E-34 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4093 86a83475661e485af3114abc8b461d8b 304 SUPERFAMILY SSF56194 199 303 1.01E-36 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4093 86a83475661e485af3114abc8b461d8b 304 SUPERFAMILY SSF56176 5 195 4.73E-47 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 SMART SM00116 316 363 1.6E-9 T 12-10-2018 IPR000644 CBS domain Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 SMART SM00116 378 425 1.9E-12 T 12-10-2018 IPR000644 CBS domain Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Gene3D G3DSA:3.10.580.10 296 428 1.8E-30 T 12-10-2018 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Gene3D G3DSA:3.30.460.10 442 597 1.3E-50 T 12-10-2018 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 SUPERFAMILY SSF81891 601 867 4.71E-38 T 12-10-2018 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 SUPERFAMILY SSF81301 452 599 1.53E-35 T 12-10-2018 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Gene3D G3DSA:1.10.3090.10 598 864 1.7E-65 T 12-10-2018 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Pfam PF01368 DHH family 3 144 2.4E-10 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 SUPERFAMILY SSF64182 3 291 1.19E-48 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Pfam PF02272 DHHA1 domain 171 289 7.0E-9 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Gene3D G3DSA:3.90.1640.10 2 187 1.3E-30 T 12-10-2018 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Pfam PF00571 CBS domain 309 363 7.3E-10 T 12-10-2018 IPR000644 CBS domain Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Pfam PF00571 CBS domain 371 424 5.6E-14 T 12-10-2018 IPR000644 CBS domain Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Pfam PF01743 Poly A polymerase head domain 475 602 6.9E-33 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 SUPERFAMILY SSF54631 306 426 4.42E-33 T 12-10-2018 Amet_2529 35d5e915d8c0835987aa22e28073efc8 875 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 627 689 1.8E-8 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Amet_3041 a1e80fa3882862e5aadcc2019e83ac72 148 Gene3D G3DSA:1.10.1510.10 1 90 3.2E-27 T 12-10-2018 Amet_3041 a1e80fa3882862e5aadcc2019e83ac72 148 SUPERFAMILY SSF89095 1 147 7.32E-44 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Amet_3041 a1e80fa3882862e5aadcc2019e83ac72 148 Gene3D G3DSA:1.10.10.410 91 147 1.1E-24 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Amet_3041 a1e80fa3882862e5aadcc2019e83ac72 148 Pfam PF09424 Yqey-like protein 4 146 6.6E-53 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Amet_0988 9b15545c6b53d6096e37df7538a54a00 358 Pfam PF13186 Iron-sulfur cluster-binding domain 246 324 1.3E-15 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Amet_0988 9b15545c6b53d6096e37df7538a54a00 358 Gene3D G3DSA:3.20.20.70 10 310 1.3E-43 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0988 9b15545c6b53d6096e37df7538a54a00 358 Pfam PF04055 Radical SAM superfamily 23 152 1.6E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_0988 9b15545c6b53d6096e37df7538a54a00 358 SMART SM00729 17 221 0.0026 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_0988 9b15545c6b53d6096e37df7538a54a00 358 Pfam PF13353 4Fe-4S single cluster domain 24 129 1.2E-6 T 12-10-2018 Amet_0988 9b15545c6b53d6096e37df7538a54a00 358 SUPERFAMILY SSF102114 18 329 7.59E-50 T 12-10-2018 Amet_0988 9b15545c6b53d6096e37df7538a54a00 358 TIGRFAM TIGR04317 W_rSAM_matur: tungsten cofactor oxidoreducase radical SAM maturase 16 358 5.2E-118 T 12-10-2018 IPR027604 Tungsten cofactor oxidoreducase radical SAM maturase Amet_3420 7845158763c106b04856c821aaab2bfb 509 Hamap MF_01567 UPF0371 protein . 1 508 57.578 T 12-10-2018 IPR014999 Uncharacterised protein family UPF0371 Amet_3420 7845158763c106b04856c821aaab2bfb 509 Gene3D G3DSA:1.20.1570.10 206 334 2.4E-165 T 12-10-2018 Amet_3420 7845158763c106b04856c821aaab2bfb 509 Pfam PF08903 Domain of unknown function (DUF1846) 3 505 2.4E-234 T 12-10-2018 IPR014999 Uncharacterised protein family UPF0371 Amet_3420 7845158763c106b04856c821aaab2bfb 509 PIRSF PIRSF033132 1 507 3.1E-260 T 12-10-2018 IPR014999 Uncharacterised protein family UPF0371 Amet_3420 7845158763c106b04856c821aaab2bfb 509 Gene3D G3DSA:3.10.630.10 3 284 2.4E-165 T 12-10-2018 Amet_3420 7845158763c106b04856c821aaab2bfb 509 Gene3D G3DSA:3.40.140.40 358 500 3.9E-51 T 12-10-2018 Amet_2233 54bde070969512e81224859a539a59d6 309 Gene3D G3DSA:3.40.50.1100 7 299 8.4E-132 T 12-10-2018 Amet_2233 54bde070969512e81224859a539a59d6 309 Gene3D G3DSA:3.40.50.1100 45 144 8.4E-132 T 12-10-2018 Amet_2233 54bde070969512e81224859a539a59d6 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 292 1.2E-73 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_2233 54bde070969512e81224859a539a59d6 309 SUPERFAMILY SSF53686 3 305 2.75E-108 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_2233 54bde070969512e81224859a539a59d6 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Amet_2233 54bde070969512e81224859a539a59d6 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 304 4.9E-148 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Amet_2233 54bde070969512e81224859a539a59d6 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 304 7.8E-141 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 Gene3D G3DSA:1.10.10.10 191 264 5.0E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 SUPERFAMILY SSF88946 17 111 4.71E-27 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 Pfam PF04539 Sigma-70 region 3 121 184 2.9E-10 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 PRINTS PR00046 Major sigma-70 factor signature 66 79 5.0E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 PRINTS PR00046 Major sigma-70 factor signature 231 246 5.0E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 PRINTS PR00046 Major sigma-70 factor signature 246 257 5.0E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 PRINTS PR00046 Major sigma-70 factor signature 214 226 5.0E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 261 1.9E-27 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 Pfam PF04542 Sigma-70 region 2 54 111 1.1E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 SUPERFAMILY SSF88659 180 263 5.61E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 Pfam PF04545 Sigma-70, region 4 210 259 2.7E-11 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 SUPERFAMILY SSF88659 115 192 7.41E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 Gene3D G3DSA:1.10.10.10 114 166 2.8E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 Gene3D G3DSA:1.10.601.10 1 113 2.7E-17 T 12-10-2018 Amet_0010 d4e037a0fc3a9046a0927f01ea80152b 266 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 261 1.5E-81 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2213 b601763db7a6cbaa0de3fa666e93c22f 145 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 3 141 36.345 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Amet_2213 b601763db7a6cbaa0de3fa666e93c22f 145 Gene3D G3DSA:3.30.565.10 3 141 8.9E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2213 b601763db7a6cbaa0de3fa666e93c22f 145 Pfam PF13581 Histidine kinase-like ATPase domain 17 137 5.2E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2213 b601763db7a6cbaa0de3fa666e93c22f 145 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 4 138 1.5E-64 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Amet_2213 b601763db7a6cbaa0de3fa666e93c22f 145 SUPERFAMILY SSF55874 26 135 8.77E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2213 b601763db7a6cbaa0de3fa666e93c22f 145 SMART SM00387 37 141 4.8E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4194 25c92b3893144e1db676296e8ba83699 436 Pfam PF02056 Family 4 glycosyl hydrolase 6 186 4.2E-61 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4194 25c92b3893144e1db676296e8ba83699 436 SUPERFAMILY SSF56327 172 435 1.85E-85 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Amet_4194 25c92b3893144e1db676296e8ba83699 436 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 8.6E-49 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Amet_4194 25c92b3893144e1db676296e8ba83699 436 Gene3D G3DSA:3.40.50.720 1 169 1.1E-65 T 12-10-2018 Amet_4194 25c92b3893144e1db676296e8ba83699 436 SUPERFAMILY SSF51735 4 169 9.05E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4194 25c92b3893144e1db676296e8ba83699 436 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 171 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 Amet_4194 25c92b3893144e1db676296e8ba83699 436 Gene3D G3DSA:3.90.110.10 170 436 7.0E-97 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Amet_4194 25c92b3893144e1db676296e8ba83699 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 3.3E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4194 25c92b3893144e1db676296e8ba83699 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 3.3E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4194 25c92b3893144e1db676296e8ba83699 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 3.3E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4194 25c92b3893144e1db676296e8ba83699 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 3.3E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4194 25c92b3893144e1db676296e8ba83699 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 3.3E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4194 25c92b3893144e1db676296e8ba83699 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 3.3E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4194 25c92b3893144e1db676296e8ba83699 436 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 3.3E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 Gene3D G3DSA:3.40.50.880 144 355 2.9E-65 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 242 253 2.3E-12 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 328 341 2.3E-12 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 215 224 2.3E-12 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 242 258 1.7E-39 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 295 1.7E-39 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 259 276 1.7E-39 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 173 187 1.7E-39 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 212 226 1.7E-39 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 353 4.1E-154 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 Pfam PF00117 Glutamine amidotransferase class-I 175 351 7.6E-49 T 12-10-2018 IPR017926 Glutamine amidotransferase Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 SUPERFAMILY SSF52317 150 355 2.29E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 357 49.003 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 SMART SM01097 1 131 1.1E-88 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00097 Anthranilate synthase component II signature 215 224 5.4E-7 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00097 Anthranilate synthase component II signature 328 341 5.4E-7 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 PRINTS PR00097 Anthranilate synthase component II signature 242 253 5.4E-7 T 12-10-2018 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 Gene3D G3DSA:3.50.30.20 1 143 1.1E-59 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 SUPERFAMILY SSF52021 1 144 1.26E-56 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3379 ab729bba9ae459685b1788fde9aea2b1 360 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 2 130 2.0E-54 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4774 09499ea6841ee6598e7fd2de826b1502 88 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 7 88 3.2E-18 T 12-10-2018 IPR010001 SigmaK-factor processing regulatory BofA Amet_4774 09499ea6841ee6598e7fd2de826b1502 88 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 13 86 1.8E-22 T 12-10-2018 IPR010001 SigmaK-factor processing regulatory BofA Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 Gene3D G3DSA:3.20.20.70 24 273 2.9E-14 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 Gene3D G3DSA:3.30.420.130 298 415 4.7E-28 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 Pfam PF13394 4Fe-4S single cluster domain 37 130 8.3E-5 T 12-10-2018 Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 Pfam PF04055 Radical SAM superfamily 32 215 2.4E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 34 45 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 SMART SM00729 28 254 4.4E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 9 291 2.2E-119 T 12-10-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 SUPERFAMILY SSF102114 26 265 4.05E-43 T 12-10-2018 Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 312 407 2.4E-17 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Amet_3517 7891098eaad2499ff7b7a8ae7e7a96bd 415 SUPERFAMILY SSF53146 300 411 4.84E-26 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Amet_4257 34b7e119d7f97ee0a7996584b9baaa36 235 Gene3D G3DSA:3.30.2010.10 136 229 3.1E-20 T 12-10-2018 Amet_4257 34b7e119d7f97ee0a7996584b9baaa36 235 Pfam PF01863 Protein of unknown function DUF45 20 229 2.0E-59 T 12-10-2018 IPR002725 Protein of unknown function DUF45 Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 ProSitePatterns PS00042 Crp-type HTH domain signature. 179 202 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 Gene3D G3DSA:2.60.120.10 1 147 5.1E-40 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 SUPERFAMILY SSF51206 7 146 4.58E-36 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 SUPERFAMILY SSF46785 152 227 1.85E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 208 1.2E-8 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 177 193 1.2E-8 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 3.8E-22 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 SMART SM00419 171 219 2.1E-14 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 SMART SM00100 14 132 1.3E-25 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 Pfam PF13545 Crp-like helix-turn-helix domain 153 225 2.7E-19 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_1180 bea94374e3736e23bf9e3ed944f33310 228 Gene3D G3DSA:1.10.10.10 148 228 2.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4670 bcb7ac5c20261fc486bc2ecdffef4b48 284 Pfam PF00005 ABC transporter 19 159 3.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4670 bcb7ac5c20261fc486bc2ecdffef4b48 284 Gene3D G3DSA:3.40.50.300 1 232 3.9E-58 T 12-10-2018 Amet_4670 bcb7ac5c20261fc486bc2ecdffef4b48 284 SUPERFAMILY SSF52540 2 217 1.04E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4670 bcb7ac5c20261fc486bc2ecdffef4b48 284 SMART SM00382 28 207 3.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4670 bcb7ac5c20261fc486bc2ecdffef4b48 284 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1506 b2d9804ed0f5ceabf87710096fbd3980 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 5.9E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1506 b2d9804ed0f5ceabf87710096fbd3980 227 SMART SM00862 149 224 4.5E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1506 b2d9804ed0f5ceabf87710096fbd3980 227 SUPERFAMILY SSF52172 1 180 3.32E-42 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1506 b2d9804ed0f5ceabf87710096fbd3980 227 SMART SM00448 4 114 9.1E-46 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1506 b2d9804ed0f5ceabf87710096fbd3980 227 Gene3D G3DSA:3.40.50.2300 1 127 5.7E-39 T 12-10-2018 Amet_1506 b2d9804ed0f5ceabf87710096fbd3980 227 Gene3D G3DSA:1.10.10.10 128 227 2.0E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1506 b2d9804ed0f5ceabf87710096fbd3980 227 Pfam PF00072 Response regulator receiver domain 6 115 8.6E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 SUPERFAMILY SSF54106 13 58 5.75E-12 T 12-10-2018 Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 SUPERFAMILY SSF54106 73 117 2.22E-10 T 12-10-2018 Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 SMART SM00257 215 259 5.7E-16 T 12-10-2018 IPR018392 LysM domain Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 SMART SM00257 73 117 1.7E-14 T 12-10-2018 IPR018392 LysM domain Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 SMART SM00257 274 318 1.5E-10 T 12-10-2018 IPR018392 LysM domain Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 SMART SM00257 14 58 1.7E-17 T 12-10-2018 IPR018392 LysM domain Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 SUPERFAMILY SSF54106 215 260 9.55E-11 T 12-10-2018 Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Pfam PF01476 LysM domain 15 58 4.2E-13 T 12-10-2018 IPR018392 LysM domain Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Pfam PF01476 LysM domain 74 117 1.3E-10 T 12-10-2018 IPR018392 LysM domain Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Pfam PF01476 LysM domain 275 318 4.3E-8 T 12-10-2018 IPR018392 LysM domain Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Pfam PF01476 LysM domain 216 259 2.4E-12 T 12-10-2018 IPR018392 LysM domain Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Gene3D G3DSA:1.10.101.10 123 201 2.0E-24 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Pfam PF01471 Putative peptidoglycan binding domain 135 189 1.0E-16 T 12-10-2018 IPR002477 Peptidoglycan binding-like Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 SUPERFAMILY SSF47090 121 193 4.71E-22 T 12-10-2018 IPR036365 PGBD-like superfamily Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Gene3D G3DSA:3.10.350.10 213 259 3.3E-21 T 12-10-2018 IPR036779 LysM domain superfamily Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Gene3D G3DSA:3.10.350.10 272 318 1.6E-15 T 12-10-2018 IPR036779 LysM domain superfamily Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Gene3D G3DSA:3.10.350.10 12 58 2.6E-20 T 12-10-2018 IPR036779 LysM domain superfamily Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 Gene3D G3DSA:3.10.350.10 71 117 9.7E-19 T 12-10-2018 IPR036779 LysM domain superfamily Amet_0541 210da8cde9c0673f5046f9a246b565b6 320 SUPERFAMILY SSF54106 274 319 3.27E-8 T 12-10-2018 Amet_0656 17974fc2466f4379394bc49aa946ad6c 229 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0656 17974fc2466f4379394bc49aa946ad6c 229 SMART SM00862 151 227 3.6E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_0656 17974fc2466f4379394bc49aa946ad6c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 6.1E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_0656 17974fc2466f4379394bc49aa946ad6c 229 SMART SM00448 2 112 9.9E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0656 17974fc2466f4379394bc49aa946ad6c 229 SUPERFAMILY SSF46894 127 228 3.97E-31 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_0656 17974fc2466f4379394bc49aa946ad6c 229 Gene3D G3DSA:1.10.10.10 132 229 3.0E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0656 17974fc2466f4379394bc49aa946ad6c 229 Gene3D G3DSA:3.40.50.2300 1 131 2.1E-34 T 12-10-2018 Amet_0656 17974fc2466f4379394bc49aa946ad6c 229 SUPERFAMILY SSF52172 1 126 1.42E-37 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4179 b9f9c8245565caa490ff71383fd4bb5f 325 Gene3D G3DSA:1.10.3210.10 142 314 3.1E-10 T 12-10-2018 Amet_4179 b9f9c8245565caa490ff71383fd4bb5f 325 SMART SM00471 163 298 1.1E-4 T 12-10-2018 IPR003607 HD/PDEase domain Amet_4179 b9f9c8245565caa490ff71383fd4bb5f 325 Gene3D G3DSA:2.40.50.140 2 95 7.1E-7 T 12-10-2018 Amet_4179 b9f9c8245565caa490ff71383fd4bb5f 325 Pfam PF01336 OB-fold nucleic acid binding domain 26 95 1.8E-8 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Amet_4179 b9f9c8245565caa490ff71383fd4bb5f 325 SUPERFAMILY SSF109604 146 286 1.92E-13 T 12-10-2018 Amet_4179 b9f9c8245565caa490ff71383fd4bb5f 325 Pfam PF01966 HD domain 168 286 4.8E-8 T 12-10-2018 IPR006674 HD domain Amet_0634 ed358f6fa81d0d5e58d94845cd779f12 157 Gene3D G3DSA:3.30.1490.400 29 157 9.4E-52 T 12-10-2018 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 Gene3D G3DSA:3.90.1440.10 232 353 9.9E-139 T 12-10-2018 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 ProSitePatterns PS01312 SecA family signature. 485 500 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 SMART SM00957 8 387 5.9E-182 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 Pfam PF01043 SecA preprotein cross-linking domain 239 343 2.5E-27 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 Gene3D G3DSA:3.40.50.300 402 580 1.1E-59 T 12-10-2018 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 SUPERFAMILY SSF52540 12 400 4.88E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 SMART SM00958 231 343 1.2E-36 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 SUPERFAMILY SSF81767 232 348 1.57E-31 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 TIGRFAM TIGR04221 SecA2_Mycobac: accessory Sec system translocase SecA2 27 758 2.3E-247 T 12-10-2018 IPR026389 Protein translocase subunit SecA, Actinobacteria-type Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 SUPERFAMILY SSF52540 402 566 1.77E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 Gene3D G3DSA:3.40.50.300 37 401 9.9E-139 T 12-10-2018 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 Hamap MF_01382 Protein translocase subunit SecA [secA]. 7 731 16.535 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 PRINTS PR00906 SecA protein signature 66 90 2.3E-54 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 PRINTS PR00906 SecA protein signature 398 411 2.3E-54 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 PRINTS PR00906 SecA protein signature 173 193 2.3E-54 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 PRINTS PR00906 SecA protein signature 104 118 2.3E-54 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 PRINTS PR00906 SecA protein signature 361 378 2.3E-54 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 PRINTS PR00906 SecA protein signature 324 346 2.3E-54 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 PRINTS PR00906 SecA protein signature 120 130 2.3E-54 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 SUPERFAMILY SSF81886 583 731 2.22E-30 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 Gene3D G3DSA:1.10.3060.10 582 736 1.5E-29 T 12-10-2018 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 Pfam PF07516 SecA Wing and Scaffold domain 580 631 1.1E-11 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 Pfam PF07516 SecA Wing and Scaffold domain 656 728 1.2E-11 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Amet_3779 9d25d42a3ee848204eb756c19e08ab67 795 Pfam PF07517 SecA DEAD-like domain 15 386 4.1E-104 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Amet_1337 83454d4b088ece148e7482a05ccb4ed2 162 SUPERFAMILY SSF75169 9 146 1.47E-18 T 12-10-2018 IPR027396 DsrEFH-like Amet_1337 83454d4b088ece148e7482a05ccb4ed2 162 Pfam PF13686 DsrE/DsrF/DrsH-like family 6 161 1.7E-53 T 12-10-2018 IPR032836 DsrE2-like family Amet_1337 83454d4b088ece148e7482a05ccb4ed2 162 Gene3D G3DSA:3.40.1260.10 3 162 2.6E-58 T 12-10-2018 IPR027396 DsrEFH-like Amet_3519 3fb0a9f1579cee08de560e540cbfc326 457 Gene3D G3DSA:3.40.50.12380 180 447 2.4E-89 T 12-10-2018 Amet_3519 3fb0a9f1579cee08de560e540cbfc326 457 SUPERFAMILY SSF53807 8 447 2.0E-138 T 12-10-2018 Amet_3519 3fb0a9f1579cee08de560e540cbfc326 457 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 8 450 5.7E-192 T 12-10-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0009399|GO:0065003 Amet_3519 3fb0a9f1579cee08de560e540cbfc326 457 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 129 143 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Amet_3519 3fb0a9f1579cee08de560e540cbfc326 457 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 45 438 9.0E-113 T 12-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Amet_3519 3fb0a9f1579cee08de560e540cbfc326 457 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 63 70 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Amet_3519 3fb0a9f1579cee08de560e540cbfc326 457 Gene3D G3DSA:3.40.50.1980 31 179 6.2E-51 T 12-10-2018 Amet_2485 dda43c5476bcc6b0dc795e97bb26643e 175 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 28 2.1E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_2485 dda43c5476bcc6b0dc795e97bb26643e 175 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_2485 dda43c5476bcc6b0dc795e97bb26643e 175 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 1.2E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_2161 75387abeadab33f32c7a8b36c2244408 286 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 29 278 5.4E-100 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Amet_2161 75387abeadab33f32c7a8b36c2244408 286 Gene3D G3DSA:3.20.20.20 9 284 2.6E-113 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2161 75387abeadab33f32c7a8b36c2244408 286 Pfam PF00809 Pterin binding enzyme 30 264 1.7E-87 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2161 75387abeadab33f32c7a8b36c2244408 286 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 29 44 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2161 75387abeadab33f32c7a8b36c2244408 286 SUPERFAMILY SSF51717 16 281 3.66E-102 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2161 75387abeadab33f32c7a8b36c2244408 286 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 63 76 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 464 3.9E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4730 0db6c668e37f2125233640f0e74d708c 481 Pfam PF00672 HAMP domain 190 239 2.7E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 SUPERFAMILY SSF47384 234 316 3.53E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 SMART SM00304 190 242 2.7E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 Gene3D G3DSA:1.10.287.130 246 316 8.4E-16 T 12-10-2018 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 314 2.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 Gene3D G3DSA:3.30.565.10 321 477 2.5E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4730 0db6c668e37f2125233640f0e74d708c 481 SUPERFAMILY SSF55874 317 465 1.7E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4730 0db6c668e37f2125233640f0e74d708c 481 Gene3D G3DSA:1.20.1480.50 155 245 5.6E-11 T 12-10-2018 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 SMART SM00387 358 469 2.8E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4730 0db6c668e37f2125233640f0e74d708c 481 SUPERFAMILY SSF158472 190 240 9.68E-9 T 12-10-2018 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4730 0db6c668e37f2125233640f0e74d708c 481 SMART SM00388 250 316 3.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4591 6ffb4d1887ec57334231a189853676de 366 SUPERFAMILY SSF52440 2 143 5.37E-38 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_4591 6ffb4d1887ec57334231a189853676de 366 PIRSF PIRSF039102 1 366 4.5E-124 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4591 6ffb4d1887ec57334231a189853676de 366 Gene3D G3DSA:3.30.1490.20 159 231 2.0E-82 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_4591 6ffb4d1887ec57334231a189853676de 366 SUPERFAMILY SSF56059 144 361 4.65E-59 T 12-10-2018 Amet_4591 6ffb4d1887ec57334231a189853676de 366 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 299 328 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4591 6ffb4d1887ec57334231a189853676de 366 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 358 42.518 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4591 6ffb4d1887ec57334231a189853676de 366 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 357 3.1E-110 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4591 6ffb4d1887ec57334231a189853676de 366 Pfam PF01820 D-ala D-ala ligase N-terminus 5 134 1.4E-33 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4591 6ffb4d1887ec57334231a189853676de 366 Gene3D G3DSA:3.30.470.20 134 359 2.0E-82 T 12-10-2018 Amet_4591 6ffb4d1887ec57334231a189853676de 366 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 111 122 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4591 6ffb4d1887ec57334231a189853676de 366 Gene3D G3DSA:3.40.50.20 1 133 1.2E-40 T 12-10-2018 Amet_4591 6ffb4d1887ec57334231a189853676de 366 Pfam PF07478 D-ala D-ala ligase C-terminus 152 355 8.9E-76 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_2728 d1e9bdfe46de8fdcc58ee184a19baea2 136 PIRSF PIRSF002889 1 134 5.6E-34 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Amet_2728 d1e9bdfe46de8fdcc58ee184a19baea2 136 Pfam PF00460 Flagella basal body rod protein 13 39 6.5E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Amet_2728 d1e9bdfe46de8fdcc58ee184a19baea2 136 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Amet_2728 d1e9bdfe46de8fdcc58ee184a19baea2 136 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 8 132 2.6E-31 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 819 1236 2.1E-91 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Gene3D G3DSA:1.10.150.700 1232 1281 8.6E-14 T 12-10-2018 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Gene3D G3DSA:1.10.150.700 1091 1180 2.2E-32 T 12-10-2018 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Gene3D G3DSA:3.20.20.140 330 418 2.1E-25 T 12-10-2018 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 SUPERFAMILY SSF53098 419 872 7.97E-106 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Gene3D G3DSA:1.10.150.870 1282 1418 4.4E-45 T 12-10-2018 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Gene3D G3DSA:3.30.420.10 419 555 8.0E-43 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 418 632 2.2E-38 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1432 382.411 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Pfam PF11490 DNA polymerase III polC-type N-terminus II 93 206 1.0E-21 T 12-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Pfam PF00929 Exonuclease 421 575 2.8E-35 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Gene3D G3DSA:3.30.1900.20 968 1090 2.8E-54 T 12-10-2018 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Pfam PF14579 Helix-hairpin-helix motif 1345 1424 4.7E-13 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Pfam PF14480 DNA polymerase III polC-type N-terminus I 9 76 2.8E-5 T 12-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 232 1432 0.0 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Gene3D G3DSA:2.40.50.140 222 320 3.3E-26 T 12-10-2018 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 SMART SM00481 335 402 2.0E-26 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Gene3D G3DSA:1.10.100.20 990 1037 2.8E-54 T 12-10-2018 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Pfam PF02811 PHP domain 336 692 2.6E-50 T 12-10-2018 IPR004013 PHP domain GO:0003824 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 Gene3D G3DSA:3.20.20.140 562 797 3.5E-55 T 12-10-2018 Amet_2678 0ba0c5031c994046788f42fef0b78157 1432 SMART SM00479 419 584 1.6E-49 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amet_0708 8e0100449b9c3516eaf3cb95111e98ae 240 Gene3D G3DSA:3.40.50.2300 5 136 4.0E-38 T 12-10-2018 Amet_0708 8e0100449b9c3516eaf3cb95111e98ae 240 SUPERFAMILY SSF52172 14 135 8.4E-41 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0708 8e0100449b9c3516eaf3cb95111e98ae 240 SUPERFAMILY SSF46894 143 237 3.26E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_0708 8e0100449b9c3516eaf3cb95111e98ae 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 237 8.9E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_0708 8e0100449b9c3516eaf3cb95111e98ae 240 Pfam PF00072 Response regulator receiver domain 19 127 4.7E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0708 8e0100449b9c3516eaf3cb95111e98ae 240 Gene3D G3DSA:1.10.10.10 137 240 1.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0708 8e0100449b9c3516eaf3cb95111e98ae 240 SMART SM00862 162 237 4.3E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_0708 8e0100449b9c3516eaf3cb95111e98ae 240 SMART SM00448 17 127 4.0E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3491 d1cfaa381c0eda720b1cac372f7afe98 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 112 381 1.7E-30 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Amet_3491 d1cfaa381c0eda720b1cac372f7afe98 397 Gene3D G3DSA:3.40.50.150 182 396 2.3E-56 T 12-10-2018 Amet_3491 d1cfaa381c0eda720b1cac372f7afe98 397 Gene3D G3DSA:2.30.130.10 2 72 1.5E-23 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 Amet_3491 d1cfaa381c0eda720b1cac372f7afe98 397 Gene3D G3DSA:3.30.750.80 74 181 9.6E-35 T 12-10-2018 Amet_3491 d1cfaa381c0eda720b1cac372f7afe98 397 SUPERFAMILY SSF53335 82 393 4.77E-61 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_3491 d1cfaa381c0eda720b1cac372f7afe98 397 SUPERFAMILY SSF88697 6 74 4.97E-20 T 12-10-2018 IPR015947 PUA-like superfamily Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 SMART SM00322 549 614 4.0E-13 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 688 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 SUPERFAMILY SSF55666 143 232 2.62E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 SMART SM00316 617 687 2.0E-23 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Gene3D G3DSA:3.30.230.70 1 227 8.8E-79 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 SUPERFAMILY SSF50249 618 700 7.49E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Pfam PF00013 KH domain 553 610 1.5E-10 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 690 30.067 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 1.8E-13 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Pfam PF03725 3' exoribonuclease family, domain 2 456 524 8.2E-7 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 PIRSF PIRSF005499 1 702 3.9E-292 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 317 1.9E-8 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Gene3D G3DSA:2.40.50.140 619 689 1.5E-26 T 12-10-2018 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 SUPERFAMILY SSF54791 553 637 6.83E-23 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Gene3D G3DSA:3.30.230.70 230 546 1.0E-113 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 SUPERFAMILY SSF55666 447 545 1.14E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Pfam PF01138 3' exoribonuclease family, domain 1 320 453 9.9E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 3.9E-19 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Gene3D G3DSA:3.30.1370.10 547 618 5.9E-19 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 SUPERFAMILY SSF54211 3 142 2.02E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 SUPERFAMILY SSF54211 292 484 9.62E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 SUPERFAMILY SSF46915 237 318 3.4E-14 T 12-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_1001 78a6b332121a628e1639a11f7e3a1beb 702 Pfam PF00575 S1 RNA binding domain 617 687 4.0E-16 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_3814 7c9715c29c2d60c96eaba4a5e8e1dd6c 248 Gene3D G3DSA:3.40.630.30 10 148 1.6E-9 T 12-10-2018 Amet_3814 7c9715c29c2d60c96eaba4a5e8e1dd6c 248 SUPERFAMILY SSF55729 70 145 3.84E-11 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_3814 7c9715c29c2d60c96eaba4a5e8e1dd6c 248 Pfam PF14268 YoaP-like 201 244 6.2E-19 T 12-10-2018 IPR025685 YoaP-like domain Amet_3814 7c9715c29c2d60c96eaba4a5e8e1dd6c 248 Pfam PF00583 Acetyltransferase (GNAT) family 44 113 7.9E-6 T 12-10-2018 IPR000182 GNAT domain Amet_2941 2d80ee3e019d4b98f5ec776743a83e4b 388 Pfam PF01546 Peptidase family M20/M25/M40 71 382 3.2E-36 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_2941 2d80ee3e019d4b98f5ec776743a83e4b 388 Pfam PF07687 Peptidase dimerisation domain 185 282 1.6E-7 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Amet_2941 2d80ee3e019d4b98f5ec776743a83e4b 388 PIRSF PIRSF005962 1 388 1.3E-129 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_2941 2d80ee3e019d4b98f5ec776743a83e4b 388 Gene3D G3DSA:3.30.70.360 180 294 5.8E-139 T 12-10-2018 Amet_2941 2d80ee3e019d4b98f5ec776743a83e4b 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 374 1.6E-113 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_2941 2d80ee3e019d4b98f5ec776743a83e4b 388 Gene3D G3DSA:3.40.630.10 14 371 5.8E-139 T 12-10-2018 Amet_2941 2d80ee3e019d4b98f5ec776743a83e4b 388 SUPERFAMILY SSF53187 3 388 8.8E-82 T 12-10-2018 Amet_2941 2d80ee3e019d4b98f5ec776743a83e4b 388 SUPERFAMILY SSF55031 182 295 1.15E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_4626 be444038ccaedff84cef9f3bc2591a24 283 Pfam PF00892 EamA-like transporter family 145 274 1.2E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_4626 be444038ccaedff84cef9f3bc2591a24 283 Pfam PF00892 EamA-like transporter family 6 135 1.5E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_4626 be444038ccaedff84cef9f3bc2591a24 283 SUPERFAMILY SSF103481 39 138 2.35E-14 T 12-10-2018 Amet_4626 be444038ccaedff84cef9f3bc2591a24 283 SUPERFAMILY SSF103481 188 276 8.11E-12 T 12-10-2018 Amet_0651 323b12edd2107a66440275e139f9a842 269 PRINTS PR01100 Shikimate kinase family signature 145 153 1.9E-20 T 12-10-2018 Amet_0651 323b12edd2107a66440275e139f9a842 269 PRINTS PR01100 Shikimate kinase family signature 117 130 1.9E-20 T 12-10-2018 Amet_0651 323b12edd2107a66440275e139f9a842 269 PRINTS PR01100 Shikimate kinase family signature 93 108 1.9E-20 T 12-10-2018 Amet_0651 323b12edd2107a66440275e139f9a842 269 PRINTS PR01100 Shikimate kinase family signature 163 172 1.9E-20 T 12-10-2018 Amet_0651 323b12edd2107a66440275e139f9a842 269 PRINTS PR01100 Shikimate kinase family signature 184 201 1.9E-20 T 12-10-2018 Amet_0651 323b12edd2107a66440275e139f9a842 269 TIGRFAM TIGR01805 CM_mono_grmpos: chorismate mutase 5 84 5.0E-22 T 12-10-2018 IPR011279 Chorismate mutase, Gram-positive Amet_0651 323b12edd2107a66440275e139f9a842 269 Pfam PF01817 Chorismate mutase type II 8 84 1.2E-14 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Amet_0651 323b12edd2107a66440275e139f9a842 269 Gene3D G3DSA:1.20.59.10 1 86 5.3E-17 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Amet_0651 323b12edd2107a66440275e139f9a842 269 Pfam PF01202 Shikimate kinase 99 255 2.1E-49 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Amet_0651 323b12edd2107a66440275e139f9a842 269 SUPERFAMILY SSF48600 4 82 1.83E-16 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Amet_0651 323b12edd2107a66440275e139f9a842 269 Hamap MF_00109 Shikimate kinase [aroK]. 90 256 27.614 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Amet_0651 323b12edd2107a66440275e139f9a842 269 Gene3D G3DSA:3.40.50.300 91 264 2.7E-56 T 12-10-2018 Amet_0651 323b12edd2107a66440275e139f9a842 269 SMART SM00830 8 87 3.3E-20 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Amet_0651 323b12edd2107a66440275e139f9a842 269 SUPERFAMILY SSF52540 90 254 6.67E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1223 6d26c68761728403dd0f8df9f17b7d48 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 8.2E-26 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amet_1223 6d26c68761728403dd0f8df9f17b7d48 76 Pfam PF00550 Phosphopantetheine attachment site 4 72 1.8E-17 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amet_1223 6d26c68761728403dd0f8df9f17b7d48 76 Gene3D G3DSA:1.10.1200.10 1 76 9.2E-26 T 12-10-2018 IPR036736 ACP-like superfamily Amet_1223 6d26c68761728403dd0f8df9f17b7d48 76 Hamap MF_01217 Acyl carrier protein [acpP]. 1 76 20.473 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amet_1223 6d26c68761728403dd0f8df9f17b7d48 76 SUPERFAMILY SSF47336 2 75 2.36E-22 T 12-10-2018 IPR036736 ACP-like superfamily Amet_1223 6d26c68761728403dd0f8df9f17b7d48 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 39 75 2.0E-13 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 Gene3D G3DSA:2.30.250.10 118 255 8.9E-146 T 12-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 SUPERFAMILY SSF101821 119 250 1.01E-32 T 12-10-2018 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 43 471 2.7E-88 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 344 360 1.3E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 140 160 1.3E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 107 123 1.3E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 300 318 1.3E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 438 453 1.3E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 176 193 1.3E-28 T 12-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 Gene3D G3DSA:3.40.630.10 54 462 8.9E-146 T 12-10-2018 Amet_3140 de7fd72867732bc917b53b362dc9a9af 477 SUPERFAMILY SSF53187 20 472 2.1E-99 T 12-10-2018 Amet_0763 4d39a743007bab34a185266d281ebe94 272 Pfam PF02311 AraC-like ligand binding domain 11 134 3.8E-6 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Amet_0763 4d39a743007bab34a185266d281ebe94 272 Pfam PF12833 Helix-turn-helix domain 187 264 1.3E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_0763 4d39a743007bab34a185266d281ebe94 272 SUPERFAMILY SSF46689 164 214 9.86E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0763 4d39a743007bab34a185266d281ebe94 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 259 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_0763 4d39a743007bab34a185266d281ebe94 272 SUPERFAMILY SSF51215 19 127 2.22E-6 T 12-10-2018 IPR037923 Transcription regulator HTH-like Amet_0763 4d39a743007bab34a185266d281ebe94 272 Gene3D G3DSA:1.10.10.60 157 214 1.4E-18 T 12-10-2018 Amet_0763 4d39a743007bab34a185266d281ebe94 272 SUPERFAMILY SSF46689 218 267 4.39E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0763 4d39a743007bab34a185266d281ebe94 272 Gene3D G3DSA:1.10.10.60 215 268 2.8E-11 T 12-10-2018 Amet_0763 4d39a743007bab34a185266d281ebe94 272 SMART SM00342 181 263 2.5E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_0416 76a8db6b679537edd22a07db1c455878 449 Pfam PF06381 Protein of unknown function (DUF1073) 54 398 2.5E-85 T 12-10-2018 IPR024459 Protein of unknown function DUF1073 Amet_0416 76a8db6b679537edd22a07db1c455878 449 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 31 420 4.9E-73 T 12-10-2018 IPR006445 Phage-associated protein HI1409 Amet_1953 76a8db6b679537edd22a07db1c455878 449 Pfam PF06381 Protein of unknown function (DUF1073) 54 398 2.5E-85 T 12-10-2018 IPR024459 Protein of unknown function DUF1073 Amet_1953 76a8db6b679537edd22a07db1c455878 449 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 31 420 4.9E-73 T 12-10-2018 IPR006445 Phage-associated protein HI1409 Amet_3213 0922baaf02b5a1293ed018e7f4b2a329 434 Pfam PF03600 Citrate transporter 14 379 1.9E-42 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Amet_3213 0922baaf02b5a1293ed018e7f4b2a329 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 434 6.4E-106 T 12-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 Amet_1700 8d441d54067b12f70df1d35c3e2de095 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 330 1.1E-140 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI Amet_1700 8d441d54067b12f70df1d35c3e2de095 330 Gene3D G3DSA:3.90.180.10 21 329 1.6E-120 T 12-10-2018 Amet_1700 8d441d54067b12f70df1d35c3e2de095 330 SMART SM00829 12 328 4.6E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amet_1700 8d441d54067b12f70df1d35c3e2de095 330 Gene3D G3DSA:3.40.50.720 129 297 1.6E-120 T 12-10-2018 Amet_1700 8d441d54067b12f70df1d35c3e2de095 330 SUPERFAMILY SSF50129 5 148 1.83E-40 T 12-10-2018 IPR011032 GroES-like superfamily Amet_1700 8d441d54067b12f70df1d35c3e2de095 330 Pfam PF00107 Zinc-binding dehydrogenase 162 275 4.8E-16 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amet_1700 8d441d54067b12f70df1d35c3e2de095 330 SUPERFAMILY SSF51735 120 290 1.5E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0263 35e6e091546bb36185b7b2e0b70570c4 273 Gene3D G3DSA:3.30.420.40 142 255 4.1E-103 T 12-10-2018 Amet_0263 35e6e091546bb36185b7b2e0b70570c4 273 Gene3D G3DSA:3.30.420.40 29 269 4.1E-103 T 12-10-2018 Amet_0263 35e6e091546bb36185b7b2e0b70570c4 273 SMART SM00842 30 136 0.0049 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Amet_0263 35e6e091546bb36185b7b2e0b70570c4 273 SUPERFAMILY SSF53067 29 132 1.57E-13 T 12-10-2018 Amet_0263 35e6e091546bb36185b7b2e0b70570c4 273 Pfam PF11104 Type IV pilus assembly protein PilM; 139 260 7.0E-12 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Amet_0263 35e6e091546bb36185b7b2e0b70570c4 273 SUPERFAMILY SSF53067 139 269 1.38E-25 T 12-10-2018 Amet_0263 35e6e091546bb36185b7b2e0b70570c4 273 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 32 270 4.6E-107 T 12-10-2018 IPR013366 Ethanolamine utilisation EutJ Amet_0263 35e6e091546bb36185b7b2e0b70570c4 273 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 143 156 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amet_2632 6d7a30e1da2116c965d63e0a0f1bbf34 179 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 5 177 1.2E-23 T 12-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 Amet_2632 6d7a30e1da2116c965d63e0a0f1bbf34 179 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 13 174 5.8E-27 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amet_2632 6d7a30e1da2116c965d63e0a0f1bbf34 179 SUPERFAMILY SSF53323 4 177 7.59E-33 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_2632 6d7a30e1da2116c965d63e0a0f1bbf34 179 Gene3D G3DSA:3.40.920.10 1 179 1.2E-55 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 Pfam PF02910 Fumarate reductase flavoprotein C-term 440 514 4.5E-9 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 Gene3D G3DSA:1.20.58.100 426 520 1.1E-17 T 12-10-2018 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 SUPERFAMILY SSF56425 225 340 7.18E-40 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 Pfam PF00890 FAD binding domain 14 380 8.9E-87 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 PIRSF PIRSF000171 3 520 8.6E-35 T 12-10-2018 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 Gene3D G3DSA:3.50.50.60 14 391 2.0E-144 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 SUPERFAMILY SSF46977 437 513 9.42E-18 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 11 513 8.2E-158 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 SUPERFAMILY SSF51905 10 400 7.74E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 Gene3D G3DSA:3.90.700.10 235 346 2.0E-144 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 343 365 1.6E-6 T 12-10-2018 Amet_0018 c0fab89abad86dda22d8303c3b71ad0b 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 1.6E-6 T 12-10-2018 Amet_2854 2ce142600d8d838c4d439b7caee72429 492 PIRSF PIRSF007466 1 492 1.6E-260 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 Amet_2854 2ce142600d8d838c4d439b7caee72429 492 Gene3D G3DSA:3.40.50.300 10 235 4.5E-11 T 12-10-2018 Amet_2854 2ce142600d8d838c4d439b7caee72429 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 1.5E-243 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 Amet_2854 2ce142600d8d838c4d439b7caee72429 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 1 492 9.4E-232 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 Amet_2854 2ce142600d8d838c4d439b7caee72429 492 SUPERFAMILY SSF52540 18 236 8.48E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0108 d945522b255ed6ff40acf93a06ffc867 171 SUPERFAMILY SSF88659 102 162 9.35E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_0108 d945522b255ed6ff40acf93a06ffc867 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 162 2.4E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_0108 d945522b255ed6ff40acf93a06ffc867 171 Pfam PF04542 Sigma-70 region 2 14 80 1.6E-12 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0108 d945522b255ed6ff40acf93a06ffc867 171 Gene3D G3DSA:1.10.10.10 107 164 1.3E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0108 d945522b255ed6ff40acf93a06ffc867 171 Gene3D G3DSA:1.10.1740.10 6 106 7.0E-22 T 12-10-2018 Amet_0108 d945522b255ed6ff40acf93a06ffc867 171 Pfam PF08281 Sigma-70, region 4 112 160 1.9E-15 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_0108 d945522b255ed6ff40acf93a06ffc867 171 SUPERFAMILY SSF88946 7 82 3.3E-20 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 SUPERFAMILY SSF56300 43 361 5.06E-79 T 12-10-2018 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 Gene3D G3DSA:3.60.21.10 37 362 3.5E-112 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 SMART SM00257 673 722 4.0E-7 T 12-10-2018 IPR018392 LysM domain Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 Gene3D G3DSA:3.90.780.10 366 583 5.4E-53 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 SUPERFAMILY SSF54106 672 722 5.49E-7 T 12-10-2018 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 ProSitePatterns PS00786 5'-nucleotidase signature 2. 131 142 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 PRINTS PR01607 Apyrase family signature 43 61 1.8E-25 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 PRINTS PR01607 Apyrase family signature 522 541 1.8E-25 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 PRINTS PR01607 Apyrase family signature 258 281 1.8E-25 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 PRINTS PR01607 Apyrase family signature 232 249 1.8E-25 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 PRINTS PR01607 Apyrase family signature 298 318 1.8E-25 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 PRINTS PR01607 Apyrase family signature 433 456 1.8E-25 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 SUPERFAMILY SSF55816 364 584 8.24E-38 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 Pfam PF00149 Calcineurin-like phosphoesterase 47 275 4.4E-7 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 Pfam PF02872 5'-nucleotidase, C-terminal domain 378 543 4.8E-24 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 Pfam PF01476 LysM domain 674 722 4.9E-10 T 12-10-2018 IPR018392 LysM domain Amet_0542 1aff0dd13635f11f74646ee0a8d7c4af 722 Gene3D G3DSA:3.10.350.10 673 720 1.7E-11 T 12-10-2018 IPR036779 LysM domain superfamily Amet_1663 66b9931e1f74e3cd9bd71f315c248764 250 PIRSF PIRSF029950 1 227 5.1E-67 T 12-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 Amet_1663 66b9931e1f74e3cd9bd71f315c248764 250 Gene3D G3DSA:3.30.70.2660 2 230 4.9E-88 T 12-10-2018 Amet_1663 66b9931e1f74e3cd9bd71f315c248764 250 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 8 50 8.5E-12 T 12-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal Amet_1663 66b9931e1f74e3cd9bd71f315c248764 250 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 7 208 4.9E-47 T 12-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Amet_1663 66b9931e1f74e3cd9bd71f315c248764 250 TIGRFAM TIGR01876 cas_Cas5d: CRISPR-associated protein Cas5, subtype I-C/DVULG 9 216 1.3E-74 T 12-10-2018 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 Amet_2310 44057eb4ee92e4a2f85b45f37448e02f 191 SUPERFAMILY SSF109604 3 185 1.19E-31 T 12-10-2018 Amet_2310 44057eb4ee92e4a2f85b45f37448e02f 191 Pfam PF01966 HD domain 20 130 1.1E-12 T 12-10-2018 IPR006674 HD domain Amet_2310 44057eb4ee92e4a2f85b45f37448e02f 191 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 12 183 4.9E-44 T 12-10-2018 IPR005249 Conserved hypothetical protein CHP00488 Amet_2310 44057eb4ee92e4a2f85b45f37448e02f 191 SMART SM00471 16 144 6.2E-7 T 12-10-2018 IPR003607 HD/PDEase domain Amet_2310 44057eb4ee92e4a2f85b45f37448e02f 191 Gene3D G3DSA:1.10.3210.10 3 187 1.0E-52 T 12-10-2018 Amet_0733 592402f135912e109765be5ae3123d76 589 SUPERFAMILY SSF53335 157 299 3.14E-5 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0733 592402f135912e109765be5ae3123d76 589 SMART SM00028 73 106 0.48 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0733 592402f135912e109765be5ae3123d76 589 SMART SM00028 39 72 0.77 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0733 592402f135912e109765be5ae3123d76 589 Gene3D G3DSA:1.25.40.10 5 160 8.5E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0733 592402f135912e109765be5ae3123d76 589 SUPERFAMILY SSF48452 15 105 1.9E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0733 592402f135912e109765be5ae3123d76 589 Pfam PF14559 Tetratricopeptide repeat 16 70 1.7E-5 T 12-10-2018 Amet_4493 f08e35c429a381e039ee29a29e0bf1f6 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 2.2E-19 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4493 f08e35c429a381e039ee29a29e0bf1f6 49 Pfam PF00471 Ribosomal protein L33 3 49 1.7E-22 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4493 f08e35c429a381e039ee29a29e0bf1f6 49 Gene3D G3DSA:2.20.28.120 1 49 7.7E-23 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4493 f08e35c429a381e039ee29a29e0bf1f6 49 SUPERFAMILY SSF57829 2 49 9.16E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Amet_4493 f08e35c429a381e039ee29a29e0bf1f6 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4493 f08e35c429a381e039ee29a29e0bf1f6 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.714 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 Gene3D G3DSA:3.10.20.400 2 93 2.4E-40 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 106 31.589 T 12-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 SUPERFAMILY SSF101386 127 215 4.49E-26 T 12-10-2018 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 102 6.0E-25 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 5 216 37.03 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 125 211 22.599 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 130 214 3.7E-17 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 128 211 3.2E-33 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 SUPERFAMILY SSF141734 5 111 2.22E-47 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 Gene3D G3DSA:1.10.287.1080 124 216 7.5E-33 T 12-10-2018 Amet_0578 95539ee5bda7cf86f82eff8a6eb1dcfb 216 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 102 3.2E-36 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Amet_2785 344faeac8274768aceefc30539fb6e3f 314 Pfam PF00551 Formyl transferase 2 179 2.0E-45 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amet_2785 344faeac8274768aceefc30539fb6e3f 314 SUPERFAMILY SSF50486 205 308 1.43E-30 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Amet_2785 344faeac8274768aceefc30539fb6e3f 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 300 2.6E-97 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Amet_2785 344faeac8274768aceefc30539fb6e3f 314 SUPERFAMILY SSF53328 1 206 1.83E-65 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amet_2785 344faeac8274768aceefc30539fb6e3f 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 36.782 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Amet_2785 344faeac8274768aceefc30539fb6e3f 314 Gene3D G3DSA:3.10.25.10 206 312 1.3E-32 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amet_2785 344faeac8274768aceefc30539fb6e3f 314 Gene3D G3DSA:3.40.50.170 1 205 3.4E-77 T 12-10-2018 Amet_2785 344faeac8274768aceefc30539fb6e3f 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amet_2785 344faeac8274768aceefc30539fb6e3f 314 Pfam PF02911 Formyl transferase, C-terminal domain 204 300 4.5E-29 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 SUPERFAMILY SSF53738 308 458 3.18E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 213 318 8.6E-26 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 Gene3D G3DSA:3.40.120.10 329 456 1.5E-35 T 12-10-2018 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 252 5.4E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 141 155 5.4E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 300 315 5.4E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 45 182 6.5E-43 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 328 452 3.0E-22 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 Gene3D G3DSA:3.40.120.10 211 328 3.7E-25 T 12-10-2018 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 SUPERFAMILY SSF53738 211 319 6.28E-22 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 511 550 3.5E-7 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 SUPERFAMILY SSF53738 32 212 1.81E-47 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 Gene3D G3DSA:3.30.310.50 475 576 1.3E-7 T 12-10-2018 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 142 151 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 SUPERFAMILY SSF55957 472 575 7.19E-13 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_0707 bcd06bd46ad086fdaec85ef8ebe0e3d0 577 Gene3D G3DSA:3.40.120.10 35 189 3.8E-50 T 12-10-2018 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 7 180 2.4E-52 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 SUPERFAMILY SSF55347 170 440 3.6E-90 T 12-10-2018 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 160 188 7.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 230 246 7.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 136 149 7.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 212 229 7.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 308 334 7.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 436 1.5E-147 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 SUPERFAMILY SSF51735 3 183 1.93E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 170 176 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 3 450 64.865 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 Gene3D G3DSA:3.40.50.720 6 415 3.8E-152 T 12-10-2018 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 PIRSF PIRSF000110 1 448 5.2E-145 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 182 444 2.0E-90 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Amet_3468 c84faa1f0c0169524277a5e30326cd01 454 Gene3D G3DSA:3.30.360.10 170 436 3.8E-152 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 SMART SM01097 1 131 3.8E-92 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 SUPERFAMILY SSF52021 1 144 9.42E-59 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 354 49.419 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00097 Anthranilate synthase component II signature 240 251 8.8E-8 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00097 Anthranilate synthase component II signature 325 338 8.8E-8 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00097 Anthranilate synthase component II signature 213 222 8.8E-8 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 349 1.8E-151 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 Gene3D G3DSA:3.50.30.20 1 145 4.0E-60 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 SUPERFAMILY SSF52317 145 351 1.53E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 325 338 4.7E-13 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 213 222 4.7E-13 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 251 4.7E-13 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 Pfam PF00117 Glutamine amidotransferase class-I 173 348 5.0E-52 T 12-10-2018 IPR017926 Glutamine amidotransferase Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 171 185 5.2E-38 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 5.2E-38 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 5.2E-38 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 293 5.2E-38 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 5.2E-38 T 12-10-2018 Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 Gene3D G3DSA:3.40.50.880 146 353 2.1E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_4211 a23fdb525fb47ce44b4011a6efefd872 361 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 2.2E-55 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Pfam PF16124 RecQ zinc-binding 335 398 3.2E-14 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Pfam PF09382 RQC domain 402 507 4.8E-35 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Gene3D G3DSA:1.10.10.10 333 512 4.6E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4695 646b7bea74835d7c39621438408eb7b9 726 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 600 1.7E-227 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 SUPERFAMILY SSF47819 529 606 5.67E-23 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 456 3.4E-145 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Gene3D G3DSA:3.40.50.300 200 332 3.9E-44 T 12-10-2018 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 SMART SM00956 405 508 1.3E-44 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 SMART SM00341 528 608 4.0E-16 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Gene3D G3DSA:1.10.150.80 525 611 1.0E-24 T 12-10-2018 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 SMART SM00487 12 209 2.0E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Pfam PF14493 Helix-turn-helix domain 634 722 1.5E-25 T 12-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 SMART SM00490 242 323 4.7E-28 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_4695 646b7bea74835d7c39621438408eb7b9 726 SUPERFAMILY SSF46785 396 522 2.04E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Gene3D G3DSA:3.40.50.300 1 199 2.0E-71 T 12-10-2018 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 SUPERFAMILY SSF52540 56 344 1.31E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Pfam PF00570 HRDC domain 532 598 4.2E-19 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Pfam PF00270 DEAD/DEAH box helicase 19 178 1.2E-21 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amet_4695 646b7bea74835d7c39621438408eb7b9 726 Pfam PF00271 Helicase conserved C-terminal domain 214 322 2.4E-21 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_0471 82fd2c263978af3fec0758b8a5a0881e 150 SUPERFAMILY SSF47741 73 148 1.22E-24 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Amet_0471 82fd2c263978af3fec0758b8a5a0881e 150 Pfam PF01799 [2Fe-2S] binding domain 73 144 1.6E-22 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Amet_0471 82fd2c263978af3fec0758b8a5a0881e 150 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 55 9.1E-6 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amet_0471 82fd2c263978af3fec0758b8a5a0881e 150 SUPERFAMILY SSF54292 1 78 3.93E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_0471 82fd2c263978af3fec0758b8a5a0881e 150 Gene3D G3DSA:1.10.150.120 77 149 6.0E-22 T 12-10-2018 Amet_0471 82fd2c263978af3fec0758b8a5a0881e 150 Gene3D G3DSA:3.10.20.30 1 76 3.6E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_1743 115fc74b8e987ee5c1d7c95ef24d3353 118 Pfam PF04324 BFD-like [2Fe-2S] binding domain 55 95 6.8E-6 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Amet_1743 115fc74b8e987ee5c1d7c95ef24d3353 118 Gene3D G3DSA:1.10.10.1100 44 114 3.0E-25 T 12-10-2018 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 Gene3D G3DSA:3.40.50.1370 151 317 5.6E-140 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 9.3E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 9.3E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 9.3E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 295 318 9.3E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 Gene3D G3DSA:3.40.50.1370 5 327 5.6E-140 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 328 6.7E-59 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.8E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 309 320 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 330 83.317 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 330 5.8E-130 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Amet_4608 a7c0bfa2bb67913af4cbe72bb6ea4af3 330 SUPERFAMILY SSF53671 4 330 3.8E-101 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amet_2007 fda504510a3520ba61bb01e1484b244f 521 PIRSF PIRSF002741 1 520 7.9E-78 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_2007 fda504510a3520ba61bb01e1484b244f 521 Gene3D G3DSA:3.40.190.10 71 269 5.7E-108 T 12-10-2018 Amet_2007 fda504510a3520ba61bb01e1484b244f 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 438 3.3E-77 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_2007 fda504510a3520ba61bb01e1484b244f 521 SUPERFAMILY SSF53850 50 514 2.17E-103 T 12-10-2018 Amet_2007 fda504510a3520ba61bb01e1484b244f 521 Gene3D G3DSA:3.10.105.10 270 478 5.7E-108 T 12-10-2018 Amet_0056 52b47b38607d848063679c423e45c637 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 290 7.0E-71 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_0056 52b47b38607d848063679c423e45c637 303 TIGRFAM TIGR01139 cysK: cysteine synthase A 6 302 4.2E-145 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Amet_0056 52b47b38607d848063679c423e45c637 303 Gene3D G3DSA:3.40.50.1100 5 298 1.9E-123 T 12-10-2018 Amet_0056 52b47b38607d848063679c423e45c637 303 Gene3D G3DSA:3.40.50.1100 44 142 1.9E-123 T 12-10-2018 Amet_0056 52b47b38607d848063679c423e45c637 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 302 8.2E-138 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Amet_0056 52b47b38607d848063679c423e45c637 303 SUPERFAMILY SSF53686 1 302 3.4E-101 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_0056 52b47b38607d848063679c423e45c637 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 283 442 7.2E-38 T 12-10-2018 IPR000160 GGDEF domain Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 Pfam PF17203 Single cache domain 3 97 197 6.6E-9 T 12-10-2018 IPR033463 Single cache domain 3 Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 SMART SM00267 276 444 6.0E-49 T 12-10-2018 IPR000160 GGDEF domain Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 Pfam PF00990 Diguanylate cyclase, GGDEF domain 287 439 1.9E-40 T 12-10-2018 IPR000160 GGDEF domain Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 Pfam PF00563 EAL domain 460 691 4.2E-64 T 12-10-2018 IPR001633 EAL domain Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 SMART SM00052 454 696 9.6E-88 T 12-10-2018 IPR001633 EAL domain Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 Gene3D G3DSA:3.30.70.270 282 457 1.5E-53 T 12-10-2018 Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 SUPERFAMILY SSF141868 459 707 6.8E-77 T 12-10-2018 IPR035919 EAL domain superfamily Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 SUPERFAMILY SSF55073 292 446 2.12E-43 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 SUPERFAMILY SSF103190 85 195 5.89E-15 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_2926 06857e34b0c5ac0c1ba18dd09dbda80d 716 Gene3D G3DSA:3.20.20.450 458 706 1.0E-83 T 12-10-2018 IPR035919 EAL domain superfamily Amet_3290 7f18ed6a01baaf603910be0277436ac2 147 SUPERFAMILY SSF52821 11 144 8.51E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_3290 7f18ed6a01baaf603910be0277436ac2 147 Pfam PF00581 Rhodanese-like domain 20 135 3.9E-12 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3290 7f18ed6a01baaf603910be0277436ac2 147 Gene3D G3DSA:3.40.250.10 6 147 2.4E-37 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_3290 7f18ed6a01baaf603910be0277436ac2 147 SMART SM00450 16 139 1.4E-9 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_2109 5fea8c530a7a35442b11e9d75f9fafee 73 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 1 58 4.4E-20 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2109 5fea8c530a7a35442b11e9d75f9fafee 73 SUPERFAMILY SSF47413 1 59 9.85E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2109 5fea8c530a7a35442b11e9d75f9fafee 73 Gene3D G3DSA:1.10.260.40 1 73 5.7E-10 T 12-10-2018 Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 PRINTS PR00996 Glutamate methyltransferase family signature 23 36 2.6E-34 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 PRINTS PR00996 Glutamate methyltransferase family signature 97 117 2.6E-34 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 PRINTS PR00996 Glutamate methyltransferase family signature 214 237 2.6E-34 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 PRINTS PR00996 Glutamate methyltransferase family signature 129 145 2.6E-34 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 PRINTS PR00996 Glutamate methyltransferase family signature 195 209 2.6E-34 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 2.6E-34 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 SUPERFAMILY SSF47757 2 66 7.59E-13 T 12-10-2018 Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 Pfam PF03705 CheR methyltransferase, all-alpha domain 3 54 6.9E-16 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 Pfam PF01739 CheR methyltransferase, SAM binding domain 67 244 3.5E-53 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 SUPERFAMILY SSF53335 67 241 2.0E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 Gene3D G3DSA:1.10.155.10 2 65 1.8E-5 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 SMART SM00138 1 254 6.6E-81 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Amet_2623 3eebc5a57543e66169eb01905d639b2a 258 Gene3D G3DSA:3.40.50.150 66 256 3.0E-62 T 12-10-2018 Amet_2039 77e9b7c955e1bf443aa4d565f77d507e 203 Gene3D G3DSA:3.40.50.300 1 203 6.8E-48 T 12-10-2018 Amet_2039 77e9b7c955e1bf443aa4d565f77d507e 203 Pfam PF00005 ABC transporter 23 151 1.9E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2039 77e9b7c955e1bf443aa4d565f77d507e 203 SMART SM00382 28 200 2.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2039 77e9b7c955e1bf443aa4d565f77d507e 203 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2039 77e9b7c955e1bf443aa4d565f77d507e 203 SUPERFAMILY SSF52540 2 202 2.39E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3754 81faedc27375b0cb04bc0492de82ec34 666 Gene3D G3DSA:3.30.450.20 142 288 1.6E-29 T 12-10-2018 Amet_3754 81faedc27375b0cb04bc0492de82ec34 666 Pfam PF02743 Cache domain 36 268 1.3E-19 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_3754 81faedc27375b0cb04bc0492de82ec34 666 SUPERFAMILY SSF58104 336 665 2.88E-58 T 12-10-2018 Amet_3754 81faedc27375b0cb04bc0492de82ec34 666 SMART SM00283 390 665 2.8E-50 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3754 81faedc27375b0cb04bc0492de82ec34 666 Gene3D G3DSA:1.10.287.950 346 665 1.9E-59 T 12-10-2018 Amet_3754 81faedc27375b0cb04bc0492de82ec34 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 617 2.5E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_1029 c371072677656754254a0c34351d9aab 312 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 78 228 3.1E-39 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amet_1029 c371072677656754254a0c34351d9aab 312 Gene3D G3DSA:1.10.260.150 46 312 6.4E-73 T 12-10-2018 Amet_1029 c371072677656754254a0c34351d9aab 312 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 79 228 1.6E-41 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amet_3115 78c2e31f6b05c3a9db97ca834f72b510 589 Pfam PF10110 Membrane domain of glycerophosphoryl diester phosphodiesterase 6 342 5.3E-80 T 12-10-2018 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain Amet_3115 78c2e31f6b05c3a9db97ca834f72b510 589 SUPERFAMILY SSF51695 357 584 1.83E-62 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amet_3115 78c2e31f6b05c3a9db97ca834f72b510 589 Gene3D G3DSA:3.20.20.190 351 588 6.4E-65 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amet_3115 78c2e31f6b05c3a9db97ca834f72b510 589 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 360 579 3.8E-35 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Amet_4336 b0dfdf1fa8c62351f226641f69f1df42 399 Gene3D G3DSA:3.30.70.360 189 303 5.6E-142 T 12-10-2018 Amet_4336 b0dfdf1fa8c62351f226641f69f1df42 399 PIRSF PIRSF005962 5 399 3.2E-135 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_4336 b0dfdf1fa8c62351f226641f69f1df42 399 SUPERFAMILY SSF55031 192 295 7.07E-30 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_4336 b0dfdf1fa8c62351f226641f69f1df42 399 Pfam PF07687 Peptidase dimerisation domain 193 289 4.7E-13 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Amet_4336 b0dfdf1fa8c62351f226641f69f1df42 399 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 384 4.9E-119 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_4336 b0dfdf1fa8c62351f226641f69f1df42 399 SUPERFAMILY SSF53187 8 396 2.2E-85 T 12-10-2018 Amet_4336 b0dfdf1fa8c62351f226641f69f1df42 399 Gene3D G3DSA:3.40.630.10 21 381 5.6E-142 T 12-10-2018 Amet_4336 b0dfdf1fa8c62351f226641f69f1df42 399 Pfam PF01546 Peptidase family M20/M25/M40 79 387 1.3E-34 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_0505 e6ae791e18efa004a41e6a64b01343a4 262 SUPERFAMILY SSF51621 2 255 4.08E-76 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amet_0505 e6ae791e18efa004a41e6a64b01343a4 262 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 238 2.0E-38 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Amet_0505 e6ae791e18efa004a41e6a64b01343a4 262 Gene3D G3DSA:3.20.20.60 1 260 4.9E-90 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00942 Copper-transporting ATPase 1 signature 64 84 1.6E-14 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00942 Copper-transporting ATPase 1 signature 9 34 1.6E-14 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00942 Copper-transporting ATPase 1 signature 35 58 1.6E-14 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00942 Copper-transporting ATPase 1 signature 216 241 1.6E-14 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 Gene3D G3DSA:3.40.1110.10 525 645 2.4E-94 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 SUPERFAMILY SSF56784 513 813 1.87E-60 T 12-10-2018 IPR036412 HAD-like superfamily Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 649 1.4E-29 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 713 732 1.4E-29 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 343 357 1.4E-29 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 670 1.4E-29 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 736 748 1.4E-29 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 514 528 1.4E-29 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 ProSitePatterns PS01047 Heavy-metal-associated domain. 89 118 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 Gene3D G3DSA:3.30.70.100 4 73 4.6E-18 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 Gene3D G3DSA:3.40.50.1000 495 764 2.4E-94 T 12-10-2018 IPR023214 HAD superfamily Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 SUPERFAMILY SSF81653 297 393 2.48E-27 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 ProSitePatterns PS01047 Heavy-metal-associated domain. 14 43 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 Pfam PF00122 E1-E2 ATPase 295 493 1.9E-50 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00943 Copper-transporting ATPase signature 99 113 3.1E-7 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00943 Copper-transporting ATPase signature 690 707 3.1E-7 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00943 Copper-transporting ATPase signature 283 301 3.1E-7 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00943 Copper-transporting ATPase signature 128 148 3.1E-7 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00943 Copper-transporting ATPase signature 263 282 3.1E-7 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00943 Copper-transporting ATPase signature 416 430 3.1E-7 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 PRINTS PR00943 Copper-transporting ATPase signature 747 761 3.1E-7 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 Pfam PF00702 haloacid dehalogenase-like hydrolase 510 726 3.0E-44 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 Gene3D G3DSA:3.30.70.100 79 152 2.2E-20 T 12-10-2018 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 SUPERFAMILY SSF55008 80 150 1.7E-19 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 Pfam PF00403 Heavy-metal-associated domain 86 147 9.8E-16 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 Pfam PF00403 Heavy-metal-associated domain 13 71 4.0E-10 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 SUPERFAMILY SSF55008 3 77 5.89E-19 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 266 801 2.7E-88 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 516 522 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 233 815 3.7E-188 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 SUPERFAMILY SSF81665 244 771 3.92E-9 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 84 148 8.9E-12 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Amet_1094 9d7abb0a90dce7f17cf9383db1ecb8a3 827 Gene3D G3DSA:2.70.150.20 286 398 2.1E-40 T 12-10-2018 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 Pfam PF08529 NusA N-terminal domain 4 123 3.1E-44 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.7E-133 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 Pfam PF00575 S1 RNA binding domain 135 194 1.4E-4 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 Gene3D G3DSA:3.30.300.20 277 346 2.6E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 343 29.306 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 Gene3D G3DSA:3.30.300.20 198 276 6.0E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 SMART SM00322 232 325 0.0041 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 SMART SM00316 133 199 2.2E-5 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 Gene3D G3DSA:2.40.50.140 136 197 4.6E-24 T 12-10-2018 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 SUPERFAMILY SSF69705 1 125 1.18E-41 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 SUPERFAMILY SSF54814 199 277 3.27E-31 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 SUPERFAMILY SSF54814 279 341 1.9E-16 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 Gene3D G3DSA:3.30.1480.10 1 128 1.7E-46 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 Pfam PF13184 NusA-like KH domain 229 294 1.6E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Amet_2676 f6d4424ba7723611211e7c2871f71a28 346 SUPERFAMILY SSF50249 132 198 4.46E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 SUPERFAMILY SSF50249 642 725 3.51E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 Gene3D G3DSA:1.10.10.650 2 107 1.6E-36 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 Pfam PF09371 Tex-like protein N-terminal domain 8 192 2.0E-66 T 12-10-2018 IPR018974 Tex-like protein, N-terminal Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 SUPERFAMILY SSF53098 311 458 6.9E-50 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 SUPERFAMILY SSF158832 1 310 6.02E-105 T 12-10-2018 Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 Gene3D G3DSA:1.10.3500.10 110 487 4.6E-148 T 12-10-2018 IPR023323 Tex-like domain superfamily Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 Gene3D G3DSA:1.10.150.310 488 635 8.8E-47 T 12-10-2018 Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 SMART SM00732 315 413 3.4E-35 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 Pfam PF00575 S1 RNA binding domain 655 725 4.1E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 SMART SM00316 654 725 6.7E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 SUPERFAMILY SSF47781 459 547 1.67E-28 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 Gene3D G3DSA:2.40.50.140 640 727 5.2E-27 T 12-10-2018 Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 Gene3D G3DSA:3.30.420.140 314 440 4.6E-148 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 Pfam PF12836 Helix-hairpin-helix motif 480 544 7.2E-29 T 12-10-2018 Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 SUPERFAMILY SSF47781 549 637 1.11E-15 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_0799 073f0ccf8819fb93033ebeb0f7d29468 728 Pfam PF16921 Tex protein YqgF-like domain 316 440 2.0E-54 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain Amet_3621 a08346fd154afffca3ff2e6ceb00fb96 250 Pfam PF02654 Cobalamin-5-phosphate synthase 12 239 5.5E-53 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Amet_3621 a08346fd154afffca3ff2e6ceb00fb96 250 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 250 38.573 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Amet_3621 a08346fd154afffca3ff2e6ceb00fb96 250 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 6 239 2.1E-45 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Amet_0082 21d471e54fefdd616fc614eac9701e73 211 Hamap MF_00165 Thymidylate kinase [tmk]. 5 206 31.122 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Amet_0082 21d471e54fefdd616fc614eac9701e73 211 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 197 2.0E-60 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Amet_0082 21d471e54fefdd616fc614eac9701e73 211 SUPERFAMILY SSF52540 1 207 1.18E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0082 21d471e54fefdd616fc614eac9701e73 211 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Amet_0082 21d471e54fefdd616fc614eac9701e73 211 Pfam PF02223 Thymidylate kinase 9 197 1.1E-54 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Amet_0082 21d471e54fefdd616fc614eac9701e73 211 Gene3D G3DSA:3.40.50.300 1 210 5.2E-69 T 12-10-2018 Amet_0894 d0f999b20787859acc31e624235a40cd 371 SUPERFAMILY SSF50331 243 369 9.57E-26 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amet_0894 d0f999b20787859acc31e624235a40cd 371 SMART SM00382 29 217 4.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0894 d0f999b20787859acc31e624235a40cd 371 Pfam PF00005 ABC transporter 21 162 1.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0894 d0f999b20787859acc31e624235a40cd 371 Pfam PF08402 TOBE domain 289 361 1.1E-5 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amet_0894 d0f999b20787859acc31e624235a40cd 371 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0894 d0f999b20787859acc31e624235a40cd 371 Gene3D G3DSA:2.40.50.940 228 362 6.8E-33 T 12-10-2018 Amet_0894 d0f999b20787859acc31e624235a40cd 371 SUPERFAMILY SSF52540 4 248 2.93E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0894 d0f999b20787859acc31e624235a40cd 371 Gene3D G3DSA:3.40.50.300 3 227 9.4E-60 T 12-10-2018 Amet_0894 d0f999b20787859acc31e624235a40cd 371 Gene3D G3DSA:2.40.50.140 295 353 6.8E-33 T 12-10-2018 Amet_3305 2054d7d22ba43e0257282253ab97cd50 212 Gene3D G3DSA:3.40.50.720 11 149 2.4E-34 T 12-10-2018 Amet_3305 2054d7d22ba43e0257282253ab97cd50 212 SUPERFAMILY SSF51735 16 144 8.81E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3305 2054d7d22ba43e0257282253ab97cd50 212 Pfam PF02254 TrkA-N domain 17 132 2.8E-27 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Amet_3305 2054d7d22ba43e0257282253ab97cd50 212 Gene3D G3DSA:3.30.70.1450 150 210 8.2E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_3305 2054d7d22ba43e0257282253ab97cd50 212 SUPERFAMILY SSF116726 143 208 1.7E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_4339 3487df1d0a9cb1eb439d0ce48311bb68 275 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 265 6.7E-68 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Amet_4339 3487df1d0a9cb1eb439d0ce48311bb68 275 Pfam PF02673 Bacitracin resistance protein BacA 6 267 1.7E-78 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Amet_4339 3487df1d0a9cb1eb439d0ce48311bb68 275 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 273 17.445 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Amet_1085 d2b75fb3713754f8bdc87713775417ab 371 Pfam PF02073 Thermophilic metalloprotease (M29) 3 333 3.7E-58 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_1085 d2b75fb3713754f8bdc87713775417ab 371 Gene3D G3DSA:3.40.1830.10 2 165 4.9E-14 T 12-10-2018 IPR035097 Peptidase M29, N-terminal Amet_1085 d2b75fb3713754f8bdc87713775417ab 371 SUPERFAMILY SSF144052 1 358 9.55E-108 T 12-10-2018 Amet_3370 acc5000402114a919780a25a4f2c902a 89 SUPERFAMILY SSF47413 19 88 4.79E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_3370 acc5000402114a919780a25a4f2c902a 89 Gene3D G3DSA:1.10.260.40 18 88 1.2E-17 T 12-10-2018 Amet_3370 acc5000402114a919780a25a4f2c902a 89 SMART SM00530 32 87 1.9E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_3370 acc5000402114a919780a25a4f2c902a 89 Pfam PF01381 Helix-turn-helix 33 84 1.3E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2701 2a8888cf3e6632e54f44e252bca9f80e 310 SUPERFAMILY SSF52540 45 290 4.52E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2701 2a8888cf3e6632e54f44e252bca9f80e 310 PIRSF PIRSF003092 1 310 4.0E-89 T 12-10-2018 IPR025501 ATP binding protein MinD Amet_2701 2a8888cf3e6632e54f44e252bca9f80e 310 Gene3D G3DSA:3.40.50.300 45 285 9.0E-58 T 12-10-2018 Amet_2701 2a8888cf3e6632e54f44e252bca9f80e 310 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 46 285 6.2E-22 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Amet_2756 a85be6cde036260e152a7b7afc89dd04 314 PIRSF PIRSF000446 1 311 1.0E-101 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Amet_2756 a85be6cde036260e152a7b7afc89dd04 314 SUPERFAMILY SSF52151 4 308 3.4E-70 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amet_2756 a85be6cde036260e152a7b7afc89dd04 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 300 9.3E-29 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Amet_2756 a85be6cde036260e152a7b7afc89dd04 314 Pfam PF00698 Acyl transferase domain 6 290 4.0E-25 T 12-10-2018 IPR014043 Acyl transferase Amet_2756 a85be6cde036260e152a7b7afc89dd04 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 9.4E-101 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Amet_2756 a85be6cde036260e152a7b7afc89dd04 314 Gene3D G3DSA:3.30.70.250 127 196 1.3E-88 T 12-10-2018 Amet_2756 a85be6cde036260e152a7b7afc89dd04 314 Gene3D G3DSA:3.40.366.10 5 286 1.3E-88 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Amet_2756 a85be6cde036260e152a7b7afc89dd04 314 SUPERFAMILY SSF55048 129 196 2.09E-16 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Amet_2124 c72e918e0c3ceac0c6f46bca3000e90a 113 SUPERFAMILY SSF50118 3 109 7.85E-9 T 12-10-2018 Amet_2124 c72e918e0c3ceac0c6f46bca3000e90a 113 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 108 6.7E-6 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Amet_2124 c72e918e0c3ceac0c6f46bca3000e90a 113 Gene3D G3DSA:2.30.30.110 3 113 3.4E-5 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 Gene3D G3DSA:3.30.565.10 318 467 3.8E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 SMART SM00388 248 312 3.2E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 SUPERFAMILY SSF47384 231 312 4.32E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 SMART SM00387 357 467 4.7E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 SMART SM00304 194 247 1.1E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 466 4.5E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 Gene3D G3DSA:1.10.287.130 254 313 7.0E-12 T 12-10-2018 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 9.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 9.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 9.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 9.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 SUPERFAMILY SSF158472 195 244 7.59E-5 T 12-10-2018 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 SUPERFAMILY SSF55874 302 467 5.89E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 310 4.9E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3258 4d3afa8caf32f312906ee4f27447e391 467 Gene3D G3DSA:1.20.1480.50 162 253 6.3E-9 T 12-10-2018 Amet_0762 a42376a0f680ab7906f83a855801579b 138 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 14 126 2.4E-25 T 12-10-2018 IPR010181 CGCAxxGCC motif Amet_0762 a42376a0f680ab7906f83a855801579b 138 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 14 127 4.5E-23 T 12-10-2018 IPR010181 CGCAxxGCC motif Amet_2321 30a4fa624335a0c813828af51e0527ea 319 SUPERFAMILY SSF56042 133 316 2.09E-54 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_2321 30a4fa624335a0c813828af51e0527ea 319 Gene3D G3DSA:3.90.650.10 134 319 1.2E-57 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_2321 30a4fa624335a0c813828af51e0527ea 319 Gene3D G3DSA:3.30.1330.10 3 132 8.8E-42 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_2321 30a4fa624335a0c813828af51e0527ea 319 Pfam PF02769 AIR synthase related protein, C-terminal domain 139 318 7.9E-32 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Amet_2321 30a4fa624335a0c813828af51e0527ea 319 TIGRFAM TIGR00476 selD: selenide, water dikinase 8 286 6.1E-114 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Amet_2321 30a4fa624335a0c813828af51e0527ea 319 SUPERFAMILY SSF55326 4 132 3.27E-38 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_2321 30a4fa624335a0c813828af51e0527ea 319 Pfam PF00586 AIR synthase related protein, N-terminal domain 21 127 2.2E-20 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Amet_2321 30a4fa624335a0c813828af51e0527ea 319 Hamap MF_00625 Selenide, water dikinase [selD]. 5 319 38.045 T 12-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Amet_2321 30a4fa624335a0c813828af51e0527ea 319 PIRSF PIRSF036407 1 319 5.3E-120 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Amet_3292 a25769ab63112d0deb076563ecdb49f6 341 Pfam PF08402 TOBE domain 269 337 1.6E-7 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amet_3292 a25769ab63112d0deb076563ecdb49f6 341 SMART SM00382 28 211 1.4E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3292 a25769ab63112d0deb076563ecdb49f6 341 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3292 a25769ab63112d0deb076563ecdb49f6 341 SUPERFAMILY SSF52540 4 243 6.15E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3292 a25769ab63112d0deb076563ecdb49f6 341 Gene3D G3DSA:2.40.50.140 271 332 4.7E-5 T 12-10-2018 Amet_3292 a25769ab63112d0deb076563ecdb49f6 341 SUPERFAMILY SSF50331 236 337 2.0E-10 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amet_3292 a25769ab63112d0deb076563ecdb49f6 341 Pfam PF00005 ABC transporter 19 161 5.7E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3292 a25769ab63112d0deb076563ecdb49f6 341 Gene3D G3DSA:2.40.50.100 266 339 4.7E-5 T 12-10-2018 Amet_3292 a25769ab63112d0deb076563ecdb49f6 341 Gene3D G3DSA:3.40.50.300 1 237 1.9E-74 T 12-10-2018 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 SUPERFAMILY SSF47323 352 567 8.22E-49 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 520 654 1.3E-42 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.7E-32 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.7E-32 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 258 273 1.7E-32 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 350 361 1.7E-32 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 225 236 1.7E-32 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 1.7E-32 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 511 9.0E-172 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 Pfam PF08264 Anticodon-binding domain of tRNA 394 526 1.9E-10 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 Gene3D G3DSA:1.10.730.10 340 518 4.9E-55 T 12-10-2018 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 SUPERFAMILY SSF52374 3 349 2.04E-110 T 12-10-2018 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 Pfam PF01588 Putative tRNA binding domain 561 652 3.1E-28 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 SUPERFAMILY SSF50249 554 654 2.45E-35 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 Gene3D G3DSA:2.40.50.140 545 655 2.1E-37 T 12-10-2018 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 510 49.735 T 12-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 3 137 3.2E-13 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 Pfam PF09334 tRNA synthetases class I (M) 146 362 1.9E-66 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 Gene3D G3DSA:3.40.50.620 6 335 2.3E-149 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_0110 0b2a0f55c3d3b39145d63da8f89dbf65 655 Gene3D G3DSA:2.170.220.10 117 227 2.3E-149 T 12-10-2018 Amet_3760 96fced11d16cb80d458adbf8b16a5b6a 155 Gene3D G3DSA:2.30.30.40 7 135 6.1E-34 T 12-10-2018 Amet_3760 96fced11d16cb80d458adbf8b16a5b6a 155 SMART SM00260 1 141 3.1E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_3760 96fced11d16cb80d458adbf8b16a5b6a 155 Gene3D G3DSA:2.40.50.180 24 136 6.1E-34 T 12-10-2018 Amet_3760 96fced11d16cb80d458adbf8b16a5b6a 155 SUPERFAMILY SSF50341 2 143 1.18E-30 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Amet_3760 96fced11d16cb80d458adbf8b16a5b6a 155 Pfam PF01584 CheW-like domain 5 142 1.4E-31 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_3875 440585f48a1758884e93acf0822beb00 309 Gene3D G3DSA:3.40.190.290 89 306 3.3E-13 T 12-10-2018 Amet_3875 440585f48a1758884e93acf0822beb00 309 Gene3D G3DSA:1.10.10.10 1 84 6.4E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3875 440585f48a1758884e93acf0822beb00 309 SUPERFAMILY SSF46785 1 77 4.48E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3875 440585f48a1758884e93acf0822beb00 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.8E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3875 440585f48a1758884e93acf0822beb00 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3875 440585f48a1758884e93acf0822beb00 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3875 440585f48a1758884e93acf0822beb00 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3875 440585f48a1758884e93acf0822beb00 309 Pfam PF03466 LysR substrate binding domain 115 298 4.0E-9 T 12-10-2018 IPR005119 LysR, substrate-binding Amet_3875 440585f48a1758884e93acf0822beb00 309 SUPERFAMILY SSF53850 91 304 4.5E-13 T 12-10-2018 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 SMART SM00387 474 584 1.7E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 Pfam PF00989 PAS fold 245 346 1.1E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 SMART SM00091 241 308 1.2E-5 T 12-10-2018 IPR000014 PAS domain Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 582 1.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 SMART SM00388 364 432 2.2E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 Gene3D G3DSA:1.20.1480.50 146 239 2.3E-16 T 12-10-2018 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 Pfam PF00512 His Kinase A (phospho-acceptor) domain 364 429 1.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 SUPERFAMILY SSF47384 357 431 1.55E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 SMART SM00304 182 234 9.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 581 4.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 529 4.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 562 4.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 543 4.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 Gene3D G3DSA:1.10.287.130 350 431 6.5E-18 T 12-10-2018 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 Gene3D G3DSA:3.30.565.10 433 589 1.1E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 Pfam PF00672 HAMP domain 184 230 1.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 SUPERFAMILY SSF55874 422 585 1.83E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 245 354 2.1E-8 T 12-10-2018 IPR000014 PAS domain Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 SUPERFAMILY SSF55785 246 350 2.79E-11 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 Gene3D G3DSA:3.30.450.20 240 349 4.3E-16 T 12-10-2018 Amet_2979 f0bc844f67ba68ffdebe0ca4cba0a352 592 SUPERFAMILY SSF158472 183 230 3.4E-10 T 12-10-2018 Amet_1624 359de4b1ed2dea62b9e7c143d291283e 471 SUPERFAMILY SSF56024 288 437 2.24E-16 T 12-10-2018 Amet_1624 359de4b1ed2dea62b9e7c143d291283e 471 SUPERFAMILY SSF56024 59 250 2.62E-13 T 12-10-2018 Amet_1624 359de4b1ed2dea62b9e7c143d291283e 471 Gene3D G3DSA:3.30.870.10 282 440 1.5E-23 T 12-10-2018 Amet_1624 359de4b1ed2dea62b9e7c143d291283e 471 Pfam PF13091 PLD-like domain 294 435 4.7E-23 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Amet_1262 b32e0fa13c6141c1050ad5ccd1ed196b 340 SUPERFAMILY SSF53613 1 329 8.73E-88 T 12-10-2018 IPR029056 Ribokinase-like Amet_1262 b32e0fa13c6141c1050ad5ccd1ed196b 340 Pfam PF00294 pfkB family carbohydrate kinase 1 318 2.3E-41 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Amet_1262 b32e0fa13c6141c1050ad5ccd1ed196b 340 Gene3D G3DSA:3.40.1190.20 1 340 2.0E-139 T 12-10-2018 IPR029056 Ribokinase-like Amet_4435 00c6f1a7c22d85d2c292055e0a21ccda 166 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 166 67.204 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Amet_4435 00c6f1a7c22d85d2c292055e0a21ccda 166 Gene3D G3DSA:3.30.1130.10 22 166 9.7E-61 T 12-10-2018 Amet_4435 00c6f1a7c22d85d2c292055e0a21ccda 166 PIRSF PIRSF027377 9 148 1.4E-59 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Amet_4435 00c6f1a7c22d85d2c292055e0a21ccda 166 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 28 140 1.7E-52 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Amet_4435 00c6f1a7c22d85d2c292055e0a21ccda 166 Pfam PF14489 QueF-like protein 63 141 1.6E-34 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Amet_4435 00c6f1a7c22d85d2c292055e0a21ccda 166 SUPERFAMILY SSF55620 27 135 1.63E-26 T 12-10-2018 Amet_2748 602805320070675fb3148abbce727498 122 SUPERFAMILY SSF88659 3 100 3.92E-29 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2748 602805320070675fb3148abbce727498 122 Gene3D G3DSA:1.10.10.10 1 118 4.1E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2748 602805320070675fb3148abbce727498 122 Hamap MF_00245 UPF0122 protein . 2 116 19.664 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like Amet_2748 602805320070675fb3148abbce727498 122 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 2 90 1.5E-30 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like Amet_2876 f220057272bcf86e59159aecc81f2486 245 Pfam PF05949 Bacterial protein of unknown function (DUF881) 91 240 5.2E-37 T 12-10-2018 IPR010273 Protein of unknown function DUF881 Amet_2876 f220057272bcf86e59159aecc81f2486 245 Gene3D G3DSA:3.30.70.1880 89 245 8.0E-39 T 12-10-2018 Amet_0590 8c395adc7fc6aad26bdab7c9f99da58c 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Amet_0590 8c395adc7fc6aad26bdab7c9f99da58c 346 SUPERFAMILY SSF51735 141 309 5.5E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0590 8c395adc7fc6aad26bdab7c9f99da58c 346 SUPERFAMILY SSF50129 3 174 6.85E-56 T 12-10-2018 IPR011032 GroES-like superfamily Amet_0590 8c395adc7fc6aad26bdab7c9f99da58c 346 SMART SM00829 10 343 9.6E-7 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amet_0590 8c395adc7fc6aad26bdab7c9f99da58c 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 137 1.4E-31 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amet_0590 8c395adc7fc6aad26bdab7c9f99da58c 346 Pfam PF00107 Zinc-binding dehydrogenase 178 302 1.9E-32 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amet_0590 8c395adc7fc6aad26bdab7c9f99da58c 346 Gene3D G3DSA:3.90.180.10 13 329 1.2E-117 T 12-10-2018 Amet_0590 8c395adc7fc6aad26bdab7c9f99da58c 346 Gene3D G3DSA:3.40.50.720 154 291 1.2E-117 T 12-10-2018 Amet_3412 edc93f2ac2c3cd7b7f2f8094d5ce3758 185 Pfam PF05683 Fumarase C-terminus 6 174 2.0E-62 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Amet_3412 edc93f2ac2c3cd7b7f2f8094d5ce3758 185 SUPERFAMILY SSF117457 5 174 7.06E-64 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Amet_3412 edc93f2ac2c3cd7b7f2f8094d5ce3758 185 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 13 174 2.5E-54 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Amet_3412 edc93f2ac2c3cd7b7f2f8094d5ce3758 185 Gene3D G3DSA:3.20.130.10 1 174 2.0E-71 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Amet_0042 04bc79aa87034e025c12f1407d1d79a6 389 Gene3D G3DSA:3.30.70.360 166 283 8.9E-131 T 12-10-2018 Amet_0042 04bc79aa87034e025c12f1407d1d79a6 389 SUPERFAMILY SSF55031 170 271 3.53E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_0042 04bc79aa87034e025c12f1407d1d79a6 389 Pfam PF07687 Peptidase dimerisation domain 172 260 1.9E-9 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Amet_0042 04bc79aa87034e025c12f1407d1d79a6 389 SUPERFAMILY SSF53187 7 375 2.98E-58 T 12-10-2018 Amet_0042 04bc79aa87034e025c12f1407d1d79a6 389 Gene3D G3DSA:3.40.630.10 18 359 8.9E-131 T 12-10-2018 Amet_0042 04bc79aa87034e025c12f1407d1d79a6 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 347 5.8E-64 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_0042 04bc79aa87034e025c12f1407d1d79a6 389 PIRSF PIRSF037226 1 389 7.3E-148 T 12-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted Amet_3418 f76e9cdb97594023a136565c278df04b 571 Gene3D G3DSA:3.40.50.1220 197 361 5.4E-55 T 12-10-2018 Amet_3418 f76e9cdb97594023a136565c278df04b 571 SUPERFAMILY SSF52467 197 363 3.85E-57 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amet_3418 f76e9cdb97594023a136565c278df04b 571 SUPERFAMILY SSF52518 374 567 2.68E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_3418 f76e9cdb97594023a136565c278df04b 571 Gene3D G3DSA:3.40.50.970 1 182 4.6E-63 T 12-10-2018 Amet_3418 f76e9cdb97594023a136565c278df04b 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 171 1.4E-54 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Amet_3418 f76e9cdb97594023a136565c278df04b 571 Gene3D G3DSA:3.40.50.970 366 570 4.6E-66 T 12-10-2018 Amet_3418 f76e9cdb97594023a136565c278df04b 571 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Amet_3418 f76e9cdb97594023a136565c278df04b 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 543 4.8E-46 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_3418 f76e9cdb97594023a136565c278df04b 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 339 3.0E-43 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Amet_3418 f76e9cdb97594023a136565c278df04b 571 SUPERFAMILY SSF52518 2 178 2.39E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_3418 f76e9cdb97594023a136565c278df04b 571 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 567 3.0E-202 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Gene3D G3DSA:3.30.65.10 557 615 5.6E-13 T 12-10-2018 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Pfam PF01131 DNA topoisomerase 128 545 6.3E-129 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 SMART SM00493 3 104 1.9E-29 T 12-10-2018 IPR006171 TOPRIM domain Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 639 53.349 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Gene3D G3DSA:1.10.460.10 136 548 1.8E-156 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 608 5.0E-239 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Gene3D G3DSA:2.70.20.10 185 455 1.8E-156 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 SUPERFAMILY SSF56712 3 586 7.85E-192 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Pfam PF01751 Toprim domain 5 114 7.4E-32 T 12-10-2018 IPR006171 TOPRIM domain Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Gene3D G3DSA:1.10.290.10 252 387 1.8E-156 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 281 304 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 78 91 3.2E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 372 388 3.2E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 471 485 3.2E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 163 181 3.2E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 295 304 3.2E-33 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 SMART SM00436 105 193 3.5E-47 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Gene3D G3DSA:3.40.50.140 1 135 1.2E-52 T 12-10-2018 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 SMART SM00437 244 508 2.8E-110 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 655 689 9.3E-4 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 574 609 4.1E-15 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 614 652 5.0E-14 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Amet_2735 b816f17a5df2cd0d1537bc748e0288f1 694 SUPERFAMILY SSF57783 569 609 5.95E-13 T 12-10-2018 Amet_0537 a6dba47fc1d1e767e9615e6da204855f 207 Pfam PF00753 Metallo-beta-lactamase superfamily 25 170 1.6E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_0537 a6dba47fc1d1e767e9615e6da204855f 207 Gene3D G3DSA:3.60.15.10 1 206 1.8E-60 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_0537 a6dba47fc1d1e767e9615e6da204855f 207 SUPERFAMILY SSF56281 1 193 9.57E-50 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_0537 a6dba47fc1d1e767e9615e6da204855f 207 SMART SM00849 12 191 4.0E-38 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3050 56b4ecc8076f7a657b4988c416b2aac2 343 SUPERFAMILY SSF46785 3 83 7.3E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3050 56b4ecc8076f7a657b4988c416b2aac2 343 SUPERFAMILY SSF55781 72 340 6.67E-56 T 12-10-2018 Amet_3050 56b4ecc8076f7a657b4988c416b2aac2 343 Pfam PF01628 HrcA protein C terminal domain 105 324 1.4E-57 T 12-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Amet_3050 56b4ecc8076f7a657b4988c416b2aac2 343 PIRSF PIRSF005485 1 342 9.0E-106 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Amet_3050 56b4ecc8076f7a657b4988c416b2aac2 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 2 331 29.681 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Amet_3050 56b4ecc8076f7a657b4988c416b2aac2 343 Gene3D G3DSA:3.30.450.40 105 338 2.1E-54 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_3050 56b4ecc8076f7a657b4988c416b2aac2 343 Gene3D G3DSA:1.10.10.10 1 86 2.4E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3050 56b4ecc8076f7a657b4988c416b2aac2 343 Gene3D G3DSA:3.30.390.60 129 229 2.1E-54 T 12-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Amet_3050 56b4ecc8076f7a657b4988c416b2aac2 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 4 337 6.4E-99 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Amet_4603 95858914956bb92d6077528a5996b559 233 SUPERFAMILY SSF48008 83 218 6.02E-31 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_4603 95858914956bb92d6077528a5996b559 233 SMART SM00895 87 211 4.5E-23 T 12-10-2018 IPR011711 GntR, C-terminal Amet_4603 95858914956bb92d6077528a5996b559 233 Gene3D G3DSA:1.20.120.530 81 226 2.0E-30 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_4603 95858914956bb92d6077528a5996b559 233 SMART SM00345 19 77 6.7E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4603 95858914956bb92d6077528a5996b559 233 SUPERFAMILY SSF46785 11 100 2.66E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4603 95858914956bb92d6077528a5996b559 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 4.2E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4603 95858914956bb92d6077528a5996b559 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 4.2E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4603 95858914956bb92d6077528a5996b559 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 8.6E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4603 95858914956bb92d6077528a5996b559 233 Gene3D G3DSA:1.10.10.10 12 78 8.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4603 95858914956bb92d6077528a5996b559 233 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 48 67 1.3E-5 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amet_4603 95858914956bb92d6077528a5996b559 233 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 48 1.3E-5 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amet_4603 95858914956bb92d6077528a5996b559 233 Pfam PF07729 FCD domain 87 210 1.9E-28 T 12-10-2018 IPR011711 GntR, C-terminal Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 93 592 2.2E-82 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 SUPERFAMILY SSF81665 16 592 7.32E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 312 318 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 SUPERFAMILY SSF56784 309 612 4.73E-55 T 12-10-2018 IPR036412 HAD-like superfamily Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 437 448 1.3E-27 T 12-10-2018 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 531 1.3E-27 T 12-10-2018 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 168 182 1.3E-27 T 12-10-2018 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 459 469 1.3E-27 T 12-10-2018 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 310 324 1.3E-27 T 12-10-2018 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 548 1.3E-27 T 12-10-2018 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 Pfam PF00702 haloacid dehalogenase-like hydrolase 309 525 2.6E-37 T 12-10-2018 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 69 615 9.1E-171 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 Gene3D G3DSA:3.40.1110.10 321 444 3.0E-87 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 SUPERFAMILY SSF81653 121 218 6.02E-25 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 70 615 1.4E-129 T 12-10-2018 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 Gene3D G3DSA:3.40.50.1000 291 565 3.0E-87 T 12-10-2018 IPR023214 HAD superfamily Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 Gene3D G3DSA:2.70.150.20 112 222 1.2E-35 T 12-10-2018 Amet_1139 5c90287a06d9e8046c991211f71e9a23 639 Pfam PF00122 E1-E2 ATPase 119 289 1.0E-47 T 12-10-2018 Amet_2341 dbf76defb9aade4d3e8a46fc7d4e9bf7 341 Pfam PF02547 Queuosine biosynthesis protein 4 340 1.4E-146 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Amet_2341 dbf76defb9aade4d3e8a46fc7d4e9bf7 341 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 8.4E-144 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Amet_2341 dbf76defb9aade4d3e8a46fc7d4e9bf7 341 SUPERFAMILY SSF111337 1 340 5.62E-142 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Amet_2341 dbf76defb9aade4d3e8a46fc7d4e9bf7 341 Gene3D G3DSA:2.40.10.240 64 162 9.7E-136 T 12-10-2018 Amet_2341 dbf76defb9aade4d3e8a46fc7d4e9bf7 341 Gene3D G3DSA:3.40.1780.10 14 340 9.7E-136 T 12-10-2018 Amet_2341 dbf76defb9aade4d3e8a46fc7d4e9bf7 341 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 47.041 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Amet_3339 778900bb33f6d8697359fd349b4be13b 46 Gene3D G3DSA:1.10.630.10 1 46 1.8E-10 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Amet_4720 03f0f57b64b8379f20405349d1bcbf62 292 Gene3D G3DSA:1.10.3720.10 64 270 8.9E-22 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4720 03f0f57b64b8379f20405349d1bcbf62 292 SUPERFAMILY SSF161098 68 255 1.57E-26 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4720 03f0f57b64b8379f20405349d1bcbf62 292 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 3 42 9.7E-8 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amet_4720 03f0f57b64b8379f20405349d1bcbf62 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 272 6.8E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 508 524 5.5E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 493 508 5.5E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 Gene3D G3DSA:1.10.10.60 423 473 2.5E-17 T 12-10-2018 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 SUPERFAMILY SSF46689 478 525 3.4E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 Gene3D G3DSA:1.10.10.60 474 527 2.5E-21 T 12-10-2018 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 Pfam PF00072 Response regulator receiver domain 4 114 2.8E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 478 520 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 Pfam PF12833 Helix-turn-helix domain 448 525 1.3E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 SMART SM00448 2 116 1.7E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 Gene3D G3DSA:3.40.50.12740 2 156 5.9E-32 T 12-10-2018 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 SUPERFAMILY SSF46689 425 475 2.96E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2816 b037df6425b1d766615d83b2920d1a07 529 SUPERFAMILY SSF52172 1 153 1.04E-32 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2816 b037df6425b1d766615d83b2920d1a07 529 SMART SM00342 441 524 2.0E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_1012 fd8faad2666eb757da5271db1026018e 583 Gene3D G3DSA:3.30.450.20 196 308 1.8E-23 T 12-10-2018 Amet_1012 fd8faad2666eb757da5271db1026018e 583 SMART SM00387 440 552 4.3E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1012 fd8faad2666eb757da5271db1026018e 583 SUPERFAMILY SSF55874 383 550 1.96E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1012 fd8faad2666eb757da5271db1026018e 583 Pfam PF00512 His Kinase A (phospho-acceptor) domain 323 394 1.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1012 fd8faad2666eb757da5271db1026018e 583 Gene3D G3DSA:1.10.287.130 313 396 5.3E-20 T 12-10-2018 Amet_1012 fd8faad2666eb757da5271db1026018e 583 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 7 129 1.7E-21 T 12-10-2018 IPR025847 MEDS domain Amet_1012 fd8faad2666eb757da5271db1026018e 583 SMART SM00091 187 255 1.9E-5 T 12-10-2018 IPR000014 PAS domain Amet_1012 fd8faad2666eb757da5271db1026018e 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 551 5.9E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1012 fd8faad2666eb757da5271db1026018e 583 Pfam PF08447 PAS fold 209 297 5.9E-16 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Amet_1012 fd8faad2666eb757da5271db1026018e 583 Gene3D G3DSA:3.30.565.10 397 554 9.5E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1012 fd8faad2666eb757da5271db1026018e 583 SUPERFAMILY SSF47384 312 394 4.32E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1012 fd8faad2666eb757da5271db1026018e 583 SMART SM00086 262 306 3.2E-4 T 12-10-2018 IPR001610 PAC motif Amet_1012 fd8faad2666eb757da5271db1026018e 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 491 1.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1012 fd8faad2666eb757da5271db1026018e 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 549 1.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1012 fd8faad2666eb757da5271db1026018e 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 505 1.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1012 fd8faad2666eb757da5271db1026018e 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 530 1.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1012 fd8faad2666eb757da5271db1026018e 583 SUPERFAMILY SSF55785 193 307 2.44E-20 T 12-10-2018 IPR035965 PAS domain superfamily Amet_1012 fd8faad2666eb757da5271db1026018e 583 SMART SM00388 322 394 9.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1012 fd8faad2666eb757da5271db1026018e 583 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 186 313 1.9E-12 T 12-10-2018 IPR000014 PAS domain Amet_0488 f72078dac062fc837238a9cfb50af758 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 558 1.5E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0488 f72078dac062fc837238a9cfb50af758 570 Gene3D G3DSA:3.30.565.10 429 562 2.1E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0488 f72078dac062fc837238a9cfb50af758 570 SUPERFAMILY SSF55874 430 558 6.43E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0488 f72078dac062fc837238a9cfb50af758 570 Pfam PF07730 Histidine kinase 359 422 3.4E-9 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amet_0488 f72078dac062fc837238a9cfb50af758 570 SMART SM00387 465 561 4.0E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0970 e9affe404692bbe3a952ffa9184efeca 162 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 152 3.4E-29 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Amet_3574 de4e688212f9c9ea433baf81056bd0b3 671 Pfam PF03030 Inorganic H+ pyrophosphatase 12 655 1.5E-283 T 12-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_3574 de4e688212f9c9ea433baf81056bd0b3 671 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 4 665 3.5E-268 T 12-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_3574 de4e688212f9c9ea433baf81056bd0b3 671 PIRSF PIRSF001265 1 668 4.7E-282 T 12-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_3574 de4e688212f9c9ea433baf81056bd0b3 671 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 660 26.476 T 12-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 Pfam PF01084 Ribosomal protein S18 22 71 3.6E-25 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 8 74 1.7E-31 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 SUPERFAMILY SSF46911 2 75 3.4E-28 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 24 47 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 PRINTS PR00974 Ribosomal protein S18 family signature 31 41 1.1E-16 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 PRINTS PR00974 Ribosomal protein S18 family signature 63 73 1.1E-16 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 PRINTS PR00974 Ribosomal protein S18 family signature 41 48 1.1E-16 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 PRINTS PR00974 Ribosomal protein S18 family signature 49 63 1.1E-16 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 Gene3D G3DSA:4.10.640.10 1 76 2.0E-28 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 24 76 4.0E-19 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0034 cc2ca5d63ea13cd35e02768f7decf47a 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 76 20.525 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2066 f032e90546e57449f63082e84f61fb9a 540 Gene3D G3DSA:3.90.1720.10 393 512 4.5E-26 T 12-10-2018 Amet_2066 f032e90546e57449f63082e84f61fb9a 540 Pfam PF00877 NlpC/P60 family 423 509 6.7E-16 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amet_2066 f032e90546e57449f63082e84f61fb9a 540 Gene3D G3DSA:3.40.710.10 1 258 4.8E-65 T 12-10-2018 Amet_2066 f032e90546e57449f63082e84f61fb9a 540 SUPERFAMILY SSF54001 409 509 1.52E-27 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amet_2066 f032e90546e57449f63082e84f61fb9a 540 SUPERFAMILY SSF56601 4 254 2.0E-45 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_2066 f032e90546e57449f63082e84f61fb9a 540 Pfam PF13354 Beta-lactamase enzyme family 27 228 1.7E-56 T 12-10-2018 Amet_2066 f032e90546e57449f63082e84f61fb9a 540 Gene3D G3DSA:2.30.30.40 327 392 7.6E-9 T 12-10-2018 Amet_4584 0a8276128996e73f7a0fe5d09660b9e5 471 Gene3D G3DSA:2.30.40.10 6 455 1.1E-145 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4584 0a8276128996e73f7a0fe5d09660b9e5 471 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 20 443 1.1E-89 T 12-10-2018 Amet_4584 0a8276128996e73f7a0fe5d09660b9e5 471 Pfam PF01979 Amidohydrolase family 54 440 2.0E-24 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_4584 0a8276128996e73f7a0fe5d09660b9e5 471 SUPERFAMILY SSF51556 56 386 9.45E-94 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_4584 0a8276128996e73f7a0fe5d09660b9e5 471 SUPERFAMILY SSF51338 3 458 4.15E-28 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4584 0a8276128996e73f7a0fe5d09660b9e5 471 Gene3D G3DSA:3.20.20.140 56 382 1.1E-145 T 12-10-2018 Amet_3719 7a7ea8f64eb5cf457a8d145aa623d3ac 316 Pfam PF13732 Domain of unknown function (DUF4162) 217 303 5.5E-7 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 Amet_3719 7a7ea8f64eb5cf457a8d145aa623d3ac 316 Pfam PF00005 ABC transporter 19 162 3.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3719 7a7ea8f64eb5cf457a8d145aa623d3ac 316 SMART SM00382 28 211 6.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3719 7a7ea8f64eb5cf457a8d145aa623d3ac 316 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3719 7a7ea8f64eb5cf457a8d145aa623d3ac 316 Gene3D G3DSA:3.40.50.300 3 241 2.5E-73 T 12-10-2018 Amet_3719 7a7ea8f64eb5cf457a8d145aa623d3ac 316 SUPERFAMILY SSF52540 5 228 1.09E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 Pfam PF02743 Cache domain 366 491 3.2E-13 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 SMART SM00283 84 359 1.2E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 SUPERFAMILY SSF103190 408 491 1.08E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 163 310 2.8E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 Gene3D G3DSA:3.30.450.20 392 489 2.1E-17 T 12-10-2018 Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 211 240 8.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 182 209 8.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 259 288 8.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 Gene3D G3DSA:1.10.287.950 51 359 3.0E-53 T 12-10-2018 Amet_0043 888bb7e4b21a033ee651c607bf6fdb1e 492 SUPERFAMILY SSF58104 23 358 6.45E-59 T 12-10-2018 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 Gene3D G3DSA:3.40.50.80 233 366 2.1E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 114 1.2E-11 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 Pfam PF00970 Oxidoreductase FAD-binding domain 134 232 9.5E-17 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 SUPERFAMILY SSF63380 105 235 4.49E-28 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 266 275 3.8E-18 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 160 172 3.8E-18 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 333 341 3.8E-18 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 226 235 3.8E-18 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 241 260 3.8E-18 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 289 4.3E-9 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 182 189 4.3E-9 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 333 341 4.3E-9 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 241 260 4.3E-9 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 Gene3D G3DSA:2.40.30.10 176 229 3.0E-9 T 12-10-2018 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 Gene3D G3DSA:2.40.30.10 125 175 2.5E-12 T 12-10-2018 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 SUPERFAMILY SSF52343 234 365 6.29E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 SUPERFAMILY SSF54292 38 121 4.26E-21 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 Pfam PF00175 Oxidoreductase NAD-binding domain 242 346 1.3E-20 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Amet_3190 21cbd0a48f73cdd1d979a4624dc4b6d2 366 Gene3D G3DSA:3.10.20.30 35 124 5.6E-26 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_2175 b50837d7ea380e9399614bb9433f8145 626 SUPERFAMILY SSF90123 38 365 6.93E-90 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_2175 b50837d7ea380e9399614bb9433f8145 626 Pfam PF00005 ABC transporter 397 545 7.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2175 b50837d7ea380e9399614bb9433f8145 626 SMART SM00382 405 597 6.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2175 b50837d7ea380e9399614bb9433f8145 626 Gene3D G3DSA:1.20.1560.10 22 366 1.8E-106 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_2175 b50837d7ea380e9399614bb9433f8145 626 Pfam PF00664 ABC transporter transmembrane region 51 333 1.4E-59 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amet_2175 b50837d7ea380e9399614bb9433f8145 626 Gene3D G3DSA:3.40.50.300 376 624 1.8E-89 T 12-10-2018 Amet_2175 b50837d7ea380e9399614bb9433f8145 626 SUPERFAMILY SSF52540 374 616 9.8E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2175 b50837d7ea380e9399614bb9433f8145 626 ProSitePatterns PS00211 ABC transporters family signature. 517 531 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 SUPERFAMILY SSF54991 699 796 2.88E-30 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Gene3D G3DSA:2.40.50.140 39 159 6.3E-68 T 12-10-2018 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Pfam PF03147 Ferredoxin-fold anticodon binding domain 703 796 2.8E-29 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Gene3D G3DSA:3.30.70.380 704 797 1.1E-29 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Gene3D G3DSA:3.50.40.10 202 402 7.4E-86 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Pfam PF03483 B3/4 domain 219 390 4.8E-67 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 790 43.059 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 SMART SM00874 409 477 1.5E-22 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Gene3D G3DSA:3.30.56.10 4 186 6.3E-68 T 12-10-2018 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 SUPERFAMILY SSF46955 410 480 9.16E-16 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Pfam PF03484 tRNA synthetase B5 domain 413 477 1.3E-18 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Gene3D G3DSA:3.30.930.10 494 689 1.4E-59 T 12-10-2018 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Gene3D G3DSA:3.30.56.10 409 480 8.2E-20 T 12-10-2018 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 796 2.5E-263 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 SMART SM00896 703 796 2.1E-43 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 SUPERFAMILY SSF50249 35 197 2.33E-44 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 SMART SM00873 219 392 2.0E-93 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 Pfam PF01588 Putative tRNA binding domain 45 149 1.8E-19 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 SUPERFAMILY SSF55681 473 691 8.12E-50 T 12-10-2018 Amet_1640 cd578c13f8b980c1353ed00aef903e3c 797 SUPERFAMILY SSF56037 206 403 4.18E-70 T 12-10-2018 Amet_2618 ca2d84bccb753b3da77ab36c5d64d5c7 399 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 1.7E-11 T 12-10-2018 Amet_2618 ca2d84bccb753b3da77ab36c5d64d5c7 399 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 91 111 1.7E-11 T 12-10-2018 Amet_2618 ca2d84bccb753b3da77ab36c5d64d5c7 399 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 113 134 1.7E-11 T 12-10-2018 Amet_2618 ca2d84bccb753b3da77ab36c5d64d5c7 399 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 1.7E-11 T 12-10-2018 Amet_2618 ca2d84bccb753b3da77ab36c5d64d5c7 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amet_2618 ca2d84bccb753b3da77ab36c5d64d5c7 399 Gene3D G3DSA:3.90.1150.10 15 385 3.2E-141 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_2618 ca2d84bccb753b3da77ab36c5d64d5c7 399 SUPERFAMILY SSF53383 1 390 1.86E-96 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2618 ca2d84bccb753b3da77ab36c5d64d5c7 399 Gene3D G3DSA:3.40.640.10 45 282 3.2E-141 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_2618 ca2d84bccb753b3da77ab36c5d64d5c7 399 Pfam PF00155 Aminotransferase class I and II 32 341 1.3E-47 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_3661 f1873ba6652ecf2ea18f8bd19f579985 280 Gene3D G3DSA:3.40.190.10 55 273 3.2E-67 T 12-10-2018 Amet_3661 f1873ba6652ecf2ea18f8bd19f579985 280 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 80 93 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site Amet_3661 f1873ba6652ecf2ea18f8bd19f579985 280 SUPERFAMILY SSF53850 1 276 2.11E-68 T 12-10-2018 Amet_3661 f1873ba6652ecf2ea18f8bd19f579985 280 SMART SM00062 57 276 6.5E-57 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amet_3661 f1873ba6652ecf2ea18f8bd19f579985 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 274 9.4E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amet_3661 f1873ba6652ecf2ea18f8bd19f579985 280 Gene3D G3DSA:3.40.190.10 141 238 3.2E-67 T 12-10-2018 Amet_0093 04e1dc52ad0c35c548d1b36396fac313 472 TIGRFAM TIGR00277 HDIG: HDIG domain 270 329 1.9E-11 T 12-10-2018 IPR006675 HDIG domain Amet_0093 04e1dc52ad0c35c548d1b36396fac313 472 Pfam PF01743 Poly A polymerase head domain 19 136 5.0E-18 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Amet_0093 04e1dc52ad0c35c548d1b36396fac313 472 SUPERFAMILY SSF81891 134 471 6.93E-40 T 12-10-2018 Amet_0093 04e1dc52ad0c35c548d1b36396fac313 472 Gene3D G3DSA:1.10.3090.10 132 456 2.4E-39 T 12-10-2018 Amet_0093 04e1dc52ad0c35c548d1b36396fac313 472 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 161 221 2.8E-9 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Amet_0093 04e1dc52ad0c35c548d1b36396fac313 472 SMART SM00471 233 396 7.5E-4 T 12-10-2018 IPR003607 HD/PDEase domain Amet_0093 04e1dc52ad0c35c548d1b36396fac313 472 SUPERFAMILY SSF81301 7 133 1.31E-24 T 12-10-2018 Amet_0093 04e1dc52ad0c35c548d1b36396fac313 472 Gene3D G3DSA:3.30.460.10 1 131 2.0E-30 T 12-10-2018 Amet_0093 04e1dc52ad0c35c548d1b36396fac313 472 Pfam PF01966 HD domain 239 384 7.4E-11 T 12-10-2018 IPR006674 HD domain Amet_0805 848378b3767d9a3bdcfb8bbd676984c7 148 Pfam PF00583 Acetyltransferase (GNAT) family 17 124 1.2E-16 T 12-10-2018 IPR000182 GNAT domain Amet_0805 848378b3767d9a3bdcfb8bbd676984c7 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 144 2.6E-41 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Amet_0805 848378b3767d9a3bdcfb8bbd676984c7 148 Gene3D G3DSA:3.40.630.30 5 148 1.5E-41 T 12-10-2018 Amet_0805 848378b3767d9a3bdcfb8bbd676984c7 148 SUPERFAMILY SSF55729 4 148 1.3E-33 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_4218 817008f4b2f334a2618013c429b2656c 425 PRINTS PR01988 Putative bacilysin exporter bacE signature 370 393 2.7E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amet_4218 817008f4b2f334a2618013c429b2656c 425 PRINTS PR01988 Putative bacilysin exporter bacE signature 179 196 2.7E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amet_4218 817008f4b2f334a2618013c429b2656c 425 PRINTS PR01988 Putative bacilysin exporter bacE signature 60 78 2.7E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amet_4218 817008f4b2f334a2618013c429b2656c 425 PRINTS PR01988 Putative bacilysin exporter bacE signature 86 104 2.7E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amet_4218 817008f4b2f334a2618013c429b2656c 425 PRINTS PR01988 Putative bacilysin exporter bacE signature 152 173 2.7E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 Amet_4218 817008f4b2f334a2618013c429b2656c 425 SUPERFAMILY SSF103473 11 416 3.27E-41 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_4218 817008f4b2f334a2618013c429b2656c 425 Gene3D G3DSA:1.20.1250.20 13 418 1.7E-33 T 12-10-2018 Amet_4218 817008f4b2f334a2618013c429b2656c 425 Pfam PF07690 Major Facilitator Superfamily 26 378 8.6E-26 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_4578 233f1acd3a6d33f9277f616b41b1b717 126 Pfam PF00936 BMC domain 4 83 5.8E-25 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_4578 233f1acd3a6d33f9277f616b41b1b717 126 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 69 4.0E-6 T 12-10-2018 Amet_4578 233f1acd3a6d33f9277f616b41b1b717 126 SMART SM00877 3 83 3.3E-27 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_4578 233f1acd3a6d33f9277f616b41b1b717 126 SUPERFAMILY SSF143414 3 92 8.63E-26 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_4578 233f1acd3a6d33f9277f616b41b1b717 126 Gene3D G3DSA:3.30.70.1710 1 117 6.1E-35 T 12-10-2018 Amet_0032 f36cd7183f2f30ce5970e75362576df6 94 Pfam PF01250 Ribosomal protein S6 3 91 9.9E-31 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0032 f36cd7183f2f30ce5970e75362576df6 94 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 20.875 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amet_0032 f36cd7183f2f30ce5970e75362576df6 94 Gene3D G3DSA:3.30.70.60 1 94 2.9E-32 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Amet_0032 f36cd7183f2f30ce5970e75362576df6 94 SUPERFAMILY SSF54995 1 93 4.06E-30 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0032 f36cd7183f2f30ce5970e75362576df6 94 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.0E-26 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4186 0d7d0f204556e3fd0344ce0c3f8b1eb6 107 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 5 98 9.5E-37 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Amet_4186 0d7d0f204556e3fd0344ce0c3f8b1eb6 107 PIRSF PIRSF000699 1 105 6.7E-37 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Amet_4186 0d7d0f204556e3fd0344ce0c3f8b1eb6 107 Gene3D G3DSA:1.20.58.280 1 103 3.4E-39 T 12-10-2018 Amet_4186 0d7d0f204556e3fd0344ce0c3f8b1eb6 107 SUPERFAMILY SSF46973 2 99 6.93E-36 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 Amet_3834 f3128a14180bc4b1aa4be8060da46477 117 Gene3D G3DSA:3.30.70.1710 4 117 4.8E-47 T 12-10-2018 Amet_3834 f3128a14180bc4b1aa4be8060da46477 117 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 44 98 0.004 T 12-10-2018 Amet_3834 f3128a14180bc4b1aa4be8060da46477 117 SMART SM00877 45 114 7.0E-20 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3834 f3128a14180bc4b1aa4be8060da46477 117 SUPERFAMILY SSF143414 45 111 1.16E-15 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_3834 f3128a14180bc4b1aa4be8060da46477 117 PIRSF PIRSF012296 3 117 1.7E-53 T 12-10-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 Amet_3834 f3128a14180bc4b1aa4be8060da46477 117 Pfam PF00936 BMC domain 46 110 9.2E-15 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_1255 f08bd26cacf35de5cdbf68df94c9ea9a 404 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 200 400 9.0E-31 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_1255 f08bd26cacf35de5cdbf68df94c9ea9a 404 Gene3D G3DSA:3.40.50.2300 1 122 8.7E-13 T 12-10-2018 Amet_1255 f08bd26cacf35de5cdbf68df94c9ea9a 404 SUPERFAMILY SSF52172 4 137 1.42E-13 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1255 f08bd26cacf35de5cdbf68df94c9ea9a 404 SMART SM00331 173 400 1.5E-13 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_1255 f08bd26cacf35de5cdbf68df94c9ea9a 404 Pfam PF00072 Response regulator receiver domain 7 117 1.4E-6 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1255 f08bd26cacf35de5cdbf68df94c9ea9a 404 Gene3D G3DSA:3.60.40.10 141 400 4.5E-47 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_1343 03b321b82c1710fdba8504cb2ae5b887 414 SUPERFAMILY SSF56176 335 413 1.28E-20 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_1343 03b321b82c1710fdba8504cb2ae5b887 414 Pfam PF01595 Domain of unknown function DUF21 11 189 1.2E-53 T 12-10-2018 IPR002550 CNNM, transmembrane domain Amet_1343 03b321b82c1710fdba8504cb2ae5b887 414 SUPERFAMILY SSF54631 199 341 6.19E-30 T 12-10-2018 Amet_1343 03b321b82c1710fdba8504cb2ae5b887 414 Pfam PF03471 Transporter associated domain 339 412 1.2E-19 T 12-10-2018 IPR005170 Transporter-associated domain Amet_1343 03b321b82c1710fdba8504cb2ae5b887 414 SMART SM01091 338 414 2.2E-21 T 12-10-2018 IPR005170 Transporter-associated domain Amet_1343 03b321b82c1710fdba8504cb2ae5b887 414 Gene3D G3DSA:3.30.465.10 332 414 5.5E-24 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_1343 03b321b82c1710fdba8504cb2ae5b887 414 Pfam PF00571 CBS domain 278 323 2.4E-4 T 12-10-2018 IPR000644 CBS domain Amet_1343 03b321b82c1710fdba8504cb2ae5b887 414 Pfam PF00571 CBS domain 204 258 3.4E-5 T 12-10-2018 IPR000644 CBS domain Amet_1343 03b321b82c1710fdba8504cb2ae5b887 414 Gene3D G3DSA:3.10.580.10 184 331 3.7E-52 T 12-10-2018 Amet_0254 28cefadc7ca300b156f2d42e521bd81b 477 PIRSF PIRSF012293 1 477 1.1E-197 T 12-10-2018 IPR009377 Ethanolamine utilisation EutA Amet_0254 28cefadc7ca300b156f2d42e521bd81b 477 Gene3D G3DSA:3.30.420.40 136 175 4.1E-7 T 12-10-2018 Amet_0254 28cefadc7ca300b156f2d42e521bd81b 477 SUPERFAMILY SSF53067 8 267 1.37E-10 T 12-10-2018 Amet_0254 28cefadc7ca300b156f2d42e521bd81b 477 Gene3D G3DSA:3.30.1490.110 89 100 4.1E-7 T 12-10-2018 Amet_0254 28cefadc7ca300b156f2d42e521bd81b 477 Gene3D G3DSA:3.30.420.40 101 135 4.1E-7 T 12-10-2018 Amet_0254 28cefadc7ca300b156f2d42e521bd81b 477 Pfam PF06277 Ethanolamine utilisation protein EutA 3 476 5.8E-211 T 12-10-2018 IPR009377 Ethanolamine utilisation EutA Amet_3116 c3c3a4d8153fa9f78610fbdee79f3839 368 Gene3D G3DSA:3.40.640.10 1 238 4.6E-62 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3116 c3c3a4d8153fa9f78610fbdee79f3839 368 Pfam PF00464 Serine hydroxymethyltransferase 12 336 5.5E-49 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Amet_3116 c3c3a4d8153fa9f78610fbdee79f3839 368 SUPERFAMILY SSF53383 11 364 3.79E-90 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3116 c3c3a4d8153fa9f78610fbdee79f3839 368 Gene3D G3DSA:3.90.1150.10 239 368 4.5E-36 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Pfam PF08447 PAS fold 289 375 1.8E-16 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Gene3D G3DSA:1.10.3210.10 542 727 1.3E-57 T 12-10-2018 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SUPERFAMILY SSF52172 1 141 5.12E-31 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Gene3D G3DSA:3.30.70.270 381 541 1.2E-41 T 12-10-2018 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SUPERFAMILY SSF109604 537 723 1.81E-30 T 12-10-2018 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SUPERFAMILY SSF55785 249 379 8.72E-23 T 12-10-2018 IPR035965 PAS domain superfamily Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Pfam PF13487 HD domain 614 675 1.1E-17 T 12-10-2018 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 389 543 2.2E-35 T 12-10-2018 IPR000160 GGDEF domain Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SUPERFAMILY SSF55785 125 250 2.09E-8 T 12-10-2018 IPR035965 PAS domain superfamily Amet_0938 c0761fd229f47b61770d51696a21ce70 728 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 258 2.2E-6 T 12-10-2018 IPR000014 PAS domain Amet_0938 c0761fd229f47b61770d51696a21ce70 728 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 261 387 3.4E-11 T 12-10-2018 IPR000014 PAS domain Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Gene3D G3DSA:3.40.50.2300 1 124 2.0E-29 T 12-10-2018 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SMART SM00091 138 212 17.0 T 12-10-2018 IPR000014 PAS domain Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SMART SM00091 264 334 1.9E-6 T 12-10-2018 IPR000014 PAS domain Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Gene3D G3DSA:3.30.450.20 125 259 7.3E-16 T 12-10-2018 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SMART SM00267 381 546 3.6E-46 T 12-10-2018 IPR000160 GGDEF domain Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Gene3D G3DSA:3.30.450.20 260 379 7.9E-27 T 12-10-2018 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Pfam PF00072 Response regulator receiver domain 6 116 2.1E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SUPERFAMILY SSF55073 397 543 8.63E-34 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SMART SM00448 4 116 6.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0938 c0761fd229f47b61770d51696a21ce70 728 SMART SM00086 339 381 5.7E-5 T 12-10-2018 IPR001610 PAC motif Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Pfam PF13426 PAS domain 162 251 0.0014 T 12-10-2018 IPR000014 PAS domain Amet_0938 c0761fd229f47b61770d51696a21ce70 728 Pfam PF00990 Diguanylate cyclase, GGDEF domain 393 537 1.2E-36 T 12-10-2018 IPR000160 GGDEF domain Amet_4747 de787f583e89b4e6fd7c82bec3ad40e5 225 SMART SM00448 1 112 1.0E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4747 de787f583e89b4e6fd7c82bec3ad40e5 225 Pfam PF00072 Response regulator receiver domain 3 113 2.9E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4747 de787f583e89b4e6fd7c82bec3ad40e5 225 SUPERFAMILY SSF52172 1 170 1.81E-37 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4747 de787f583e89b4e6fd7c82bec3ad40e5 225 Gene3D G3DSA:3.40.50.2300 1 120 1.7E-36 T 12-10-2018 Amet_4747 de787f583e89b4e6fd7c82bec3ad40e5 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 3.5E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_4747 de787f583e89b4e6fd7c82bec3ad40e5 225 SMART SM00862 145 220 2.1E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_4747 de787f583e89b4e6fd7c82bec3ad40e5 225 Gene3D G3DSA:1.10.10.10 121 225 9.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 SUPERFAMILY SSF81301 178 391 2.13E-66 T 12-10-2018 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 Pfam PF04607 Region found in RelA / SpoT proteins 233 343 3.3E-39 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 Pfam PF13291 ACT domain 649 724 8.3E-21 T 12-10-2018 IPR002912 ACT domain Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 Gene3D G3DSA:3.30.70.260 648 727 5.6E-18 T 12-10-2018 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 SUPERFAMILY SSF81271 374 446 2.94E-24 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 SUPERFAMILY SSF55021 648 726 1.42E-12 T 12-10-2018 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 Gene3D G3DSA:1.10.3210.10 1 189 4.7E-82 T 12-10-2018 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 Gene3D G3DSA:3.30.460.10 191 323 1.2E-52 T 12-10-2018 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 SMART SM00954 233 343 3.4E-70 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 SMART SM00471 39 151 8.9E-10 T 12-10-2018 IPR003607 HD/PDEase domain Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 Gene3D G3DSA:3.10.20.30 380 451 3.3E-34 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 Pfam PF02824 TGS domain 387 446 7.2E-22 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 24 723 1.9E-257 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 SUPERFAMILY SSF109604 3 188 2.2E-73 T 12-10-2018 Amet_2353 4a62a8080c302e1de32c21248cd04c64 727 Pfam PF13328 HD domain 24 173 3.3E-52 T 12-10-2018 IPR003607 HD/PDEase domain Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 SUPERFAMILY SSF51569 3 293 4.58E-98 T 12-10-2018 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 SUPERFAMILY SSF110921 406 500 5.23E-24 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 6 498 4.1E-224 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 4 510 43.231 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 SMART SM00917 371 501 3.5E-39 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 500 3.0E-39 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 Gene3D G3DSA:1.10.238.260 282 394 6.3E-41 T 12-10-2018 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 14 30 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 Gene3D G3DSA:3.30.160.270 395 502 1.9E-12 T 12-10-2018 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 Gene3D G3DSA:3.20.20.70 3 278 2.1E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 201 214 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_3458 0b358739017bf7b0b3dcb153a766e15a 513 Pfam PF00682 HMGL-like 6 274 4.8E-97 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amet_0664 e40dd1313e237254aea5104d5bea1c1c 391 Pfam PF13375 RnfC Barrel sandwich hybrid domain 2 56 3.6E-17 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Amet_0664 e40dd1313e237254aea5104d5bea1c1c 391 SUPERFAMILY SSF142019 40 243 4.71E-50 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0664 e40dd1313e237254aea5104d5bea1c1c 391 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 82 225 1.3E-43 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0664 e40dd1313e237254aea5104d5bea1c1c 391 TIGRFAM TIGR04481 PR_assoc_PrdC: proline reductase-associated electron transfer protein PrdC 4 391 1.9E-165 T 12-10-2018 IPR031001 Proline reductase-associated electron transfer protein PrdC Amet_0664 e40dd1313e237254aea5104d5bea1c1c 391 Gene3D G3DSA:3.40.50.11540 87 231 5.2E-15 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_1288 f74a2c106777f11750b4c5cca4c8758d 332 PIRSF PIRSF006470 2 329 1.5E-75 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Amet_1288 f74a2c106777f11750b4c5cca4c8758d 332 Gene3D G3DSA:3.40.190.170 29 328 2.9E-94 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Amet_1288 f74a2c106777f11750b4c5cca4c8758d 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 317 8.4E-77 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Amet_1288 f74a2c106777f11750b4c5cca4c8758d 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 40 294 3.3E-54 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Amet_0185 7883d769df67a71d0537f939e9bd8dd0 259 SUPERFAMILY SSF55383 64 95 1.16E-6 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_0185 7883d769df67a71d0537f939e9bd8dd0 259 Pfam PF07833 Copper amine oxidase N-terminal domain 62 97 7.7E-9 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_0131 959387acee032308e4c807c0fb8ef802 418 Pfam PF03851 UV-endonuclease UvdE 4 263 9.3E-73 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 Amet_0131 959387acee032308e4c807c0fb8ef802 418 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 4 286 1.7E-64 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 Amet_0131 959387acee032308e4c807c0fb8ef802 418 SUPERFAMILY SSF51658 79 204 6.47E-12 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Amet_0131 959387acee032308e4c807c0fb8ef802 418 Gene3D G3DSA:3.20.20.150 1 298 9.3E-98 T 12-10-2018 Amet_0131 959387acee032308e4c807c0fb8ef802 418 Pfam PF08349 Protein of unknown function (DUF1722) 308 416 3.3E-25 T 12-10-2018 IPR013560 Domain of unknown function DUF1722 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 Gene3D G3DSA:3.40.50.150 6 223 1.4E-45 T 12-10-2018 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 6.2E-11 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 6.2E-11 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 167 179 6.2E-11 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 6.2E-11 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 PIRSF PIRSF000398 1 253 7.8E-45 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 TIGRFAM TIGR00571 dam: DNA adenine methylase 3 250 9.6E-35 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 Gene3D G3DSA:1.10.1020.10 56 147 1.4E-45 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 231 1.1E-23 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Amet_2440 ff7ad14e9942a5bb9af584b3fef37be2 253 SUPERFAMILY SSF53335 1 252 4.21E-61 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0226 8a888ded226cede40b5e24223fdafad1 425 Pfam PF07005 Putative sugar-binding N-terminal domain 2 218 9.5E-38 T 12-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Amet_0226 8a888ded226cede40b5e24223fdafad1 425 Gene3D G3DSA:3.40.980.20 228 417 1.4E-21 T 12-10-2018 Amet_0226 8a888ded226cede40b5e24223fdafad1 425 Gene3D G3DSA:3.40.50.10840 1 223 5.7E-47 T 12-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Amet_0226 8a888ded226cede40b5e24223fdafad1 425 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 242 408 9.1E-27 T 12-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Amet_0226 8a888ded226cede40b5e24223fdafad1 425 SUPERFAMILY SSF142764 2 415 4.84E-80 T 12-10-2018 Amet_2860 db13358a1f107d611db452c877234fbe 111 Pfam PF11385 Protein of unknown function (DUF3189) 39 93 1.6E-5 T 12-10-2018 IPR021525 Protein of unknown function DUF3189 Amet_2056 969dee35d7db632dc7212917ccbc6354 450 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 417 3.5E-64 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_2056 969dee35d7db632dc7212917ccbc6354 450 Pfam PF01554 MatE 247 401 4.2E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_2056 969dee35d7db632dc7212917ccbc6354 450 Pfam PF01554 MatE 25 185 1.6E-28 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_2056 969dee35d7db632dc7212917ccbc6354 450 PIRSF PIRSF006603 2 446 1.1E-95 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1056 6c41012254421d7b62f17c2408ee6100 685 Pfam PF00239 Resolvase, N terminal domain 16 167 9.6E-23 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_1056 6c41012254421d7b62f17c2408ee6100 685 Gene3D G3DSA:3.40.50.1390 13 169 8.7E-22 T 12-10-2018 Amet_1056 6c41012254421d7b62f17c2408ee6100 685 Pfam PF13408 Recombinase zinc beta ribbon domain 331 389 8.4E-11 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_1056 6c41012254421d7b62f17c2408ee6100 685 Pfam PF07508 Recombinase 193 315 3.4E-10 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_1056 6c41012254421d7b62f17c2408ee6100 685 SUPERFAMILY SSF53041 15 167 2.62E-21 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_1056 6c41012254421d7b62f17c2408ee6100 685 SMART SM00857 16 168 1.1E-27 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_3360 6c41012254421d7b62f17c2408ee6100 685 Pfam PF00239 Resolvase, N terminal domain 16 167 9.6E-23 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_3360 6c41012254421d7b62f17c2408ee6100 685 Gene3D G3DSA:3.40.50.1390 13 169 8.7E-22 T 12-10-2018 Amet_3360 6c41012254421d7b62f17c2408ee6100 685 Pfam PF13408 Recombinase zinc beta ribbon domain 331 389 8.4E-11 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_3360 6c41012254421d7b62f17c2408ee6100 685 Pfam PF07508 Recombinase 193 315 3.4E-10 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_3360 6c41012254421d7b62f17c2408ee6100 685 SUPERFAMILY SSF53041 15 167 2.62E-21 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_3360 6c41012254421d7b62f17c2408ee6100 685 SMART SM00857 16 168 1.1E-27 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_4255 481eb6dc762b8a9b759b810522e4b06d 227 Pfam PF03167 Uracil DNA glycosylase superfamily 55 208 3.1E-25 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_4255 481eb6dc762b8a9b759b810522e4b06d 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_4255 481eb6dc762b8a9b759b810522e4b06d 227 SUPERFAMILY SSF52141 3 220 2.83E-92 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_4255 481eb6dc762b8a9b759b810522e4b06d 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 211 1.2E-82 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_4255 481eb6dc762b8a9b759b810522e4b06d 227 Gene3D G3DSA:3.40.470.10 1 226 1.2E-97 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_4255 481eb6dc762b8a9b759b810522e4b06d 227 SMART SM00986 49 209 7.7E-38 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_4255 481eb6dc762b8a9b759b810522e4b06d 227 SMART SM00987 49 209 7.7E-38 T 12-10-2018 Amet_4255 481eb6dc762b8a9b759b810522e4b06d 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 5 220 40.631 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_2903 7075ee746c68605c5a4a7e2c32850ef7 179 SUPERFAMILY SSF53271 3 178 2.88E-57 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_2903 7075ee746c68605c5a4a7e2c32850ef7 179 Pfam PF00156 Phosphoribosyl transferase domain 7 160 7.6E-24 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amet_2903 7075ee746c68605c5a4a7e2c32850ef7 179 Gene3D G3DSA:3.40.50.2020 1 179 1.9E-68 T 12-10-2018 Amet_2903 7075ee746c68605c5a4a7e2c32850ef7 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 173 1.5E-70 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Amet_1705 63a1abd3d000e8fde6decbd4bd844094 384 SUPERFAMILY SSF109604 141 306 3.14E-37 T 12-10-2018 Amet_1705 63a1abd3d000e8fde6decbd4bd844094 384 Gene3D G3DSA:1.10.3210.10 3 308 3.3E-77 T 12-10-2018 Amet_1705 63a1abd3d000e8fde6decbd4bd844094 384 TIGRFAM TIGR00277 HDIG: HDIG domain 143 235 2.8E-7 T 12-10-2018 IPR006675 HDIG domain Amet_1705 63a1abd3d000e8fde6decbd4bd844094 384 SMART SM00471 141 277 5.9E-10 T 12-10-2018 IPR003607 HD/PDEase domain Amet_1705 63a1abd3d000e8fde6decbd4bd844094 384 Pfam PF13487 HD domain 196 258 1.1E-13 T 12-10-2018 Amet_0820 b0008b69c073781d8e66dfbdc50a6791 408 Gene3D G3DSA:3.40.50.1220 268 398 8.8E-48 T 12-10-2018 Amet_0820 b0008b69c073781d8e66dfbdc50a6791 408 SMART SM00893 72 260 5.8E-44 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0820 b0008b69c073781d8e66dfbdc50a6791 408 SUPERFAMILY SSF52402 70 266 1.53E-54 T 12-10-2018 Amet_0820 b0008b69c073781d8e66dfbdc50a6791 408 SUPERFAMILY SSF54862 4 47 4.19E-5 T 12-10-2018 Amet_0820 b0008b69c073781d8e66dfbdc50a6791 408 Gene3D G3DSA:3.40.50.620 69 267 1.5E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_0820 b0008b69c073781d8e66dfbdc50a6791 408 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 271 353 7.4E-31 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Amet_0820 b0008b69c073781d8e66dfbdc50a6791 408 PIRSF PIRSF000089 69 395 3.5E-96 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Amet_0820 b0008b69c073781d8e66dfbdc50a6791 408 SUPERFAMILY SSF52467 270 390 5.03E-42 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amet_0820 b0008b69c073781d8e66dfbdc50a6791 408 Pfam PF01012 Electron transfer flavoprotein domain 74 245 3.0E-41 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_2489 15d5a51c323c73bfc3d439aa883f0d56 355 SUPERFAMILY SSF55920 82 347 2.49E-82 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like Amet_2489 15d5a51c323c73bfc3d439aa883f0d56 355 PRINTS PR00599 Methionine aminopeptidase-1 signature 274 286 3.5E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_2489 15d5a51c323c73bfc3d439aa883f0d56 355 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 3.5E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_2489 15d5a51c323c73bfc3d439aa883f0d56 355 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 3.5E-7 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_2489 15d5a51c323c73bfc3d439aa883f0d56 355 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 2.1E-26 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Amet_2489 15d5a51c323c73bfc3d439aa883f0d56 355 Gene3D G3DSA:3.40.350.10 1 127 3.1E-35 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amet_2489 15d5a51c323c73bfc3d439aa883f0d56 355 Pfam PF00557 Metallopeptidase family M24 135 336 7.7E-72 T 12-10-2018 IPR000994 Peptidase M24 Amet_2489 15d5a51c323c73bfc3d439aa883f0d56 355 Gene3D G3DSA:3.90.230.10 128 351 2.7E-88 T 12-10-2018 Amet_2489 15d5a51c323c73bfc3d439aa883f0d56 355 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Amet_3310 179f171b5311b33a3c75f2c0d29b68c5 450 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 31 421 1.0E-103 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Amet_3310 179f171b5311b33a3c75f2c0d29b68c5 450 Pfam PF02386 Cation transport protein 42 434 2.2E-60 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Amet_4583 84f0b33fc18257adae0c6c5ea6834519 200 SUPERFAMILY SSF52499 2 185 2.49E-53 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amet_4583 84f0b33fc18257adae0c6c5ea6834519 200 Gene3D G3DSA:3.40.50.850 1 184 1.8E-78 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Amet_4583 84f0b33fc18257adae0c6c5ea6834519 200 Pfam PF00857 Isochorismatase family 5 177 1.1E-44 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 Amet_2002 63e6d4c12192b47c0351b4146186dda8 288 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2002 63e6d4c12192b47c0351b4146186dda8 288 SUPERFAMILY SSF52540 3 222 1.96E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2002 63e6d4c12192b47c0351b4146186dda8 288 SMART SM00382 26 208 7.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2002 63e6d4c12192b47c0351b4146186dda8 288 Gene3D G3DSA:3.40.50.300 1 230 1.5E-61 T 12-10-2018 Amet_2002 63e6d4c12192b47c0351b4146186dda8 288 Pfam PF00005 ABC transporter 29 160 4.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4167 e7cf4a2e3543e6bf0f43b671f0178e48 1174 Gene3D G3DSA:3.40.50.300 1 290 1.6E-39 T 12-10-2018 Amet_4167 e7cf4a2e3543e6bf0f43b671f0178e48 1174 SUPERFAMILY SSF52540 8 1149 5.71E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4167 e7cf4a2e3543e6bf0f43b671f0178e48 1174 Gene3D G3DSA:3.40.50.300 822 1172 2.1E-21 T 12-10-2018 Amet_4167 e7cf4a2e3543e6bf0f43b671f0178e48 1174 Pfam PF13476 AAA domain 6 306 6.8E-19 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain Amet_4167 e7cf4a2e3543e6bf0f43b671f0178e48 1174 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1058 1131 8.6E-14 T 12-10-2018 Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 Pfam PF12848 ABC transporter 167 277 1.4E-6 T 12-10-2018 IPR032781 ABC-transporter extension domain Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 Gene3D G3DSA:3.40.50.300 2 83 2.9E-12 T 12-10-2018 Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 SUPERFAMILY SSF52540 277 486 2.98E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 Pfam PF00005 ABC transporter 25 63 5.8E-8 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 Pfam PF00005 ABC transporter 313 436 3.5E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 SMART SM00382 29 173 7.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 SMART SM00382 321 482 1.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 SUPERFAMILY SSF52540 4 192 5.27E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 Gene3D G3DSA:3.40.50.300 291 487 2.4E-42 T 12-10-2018 Amet_1903 d808ba6e3ac12173df86fc2522ee5698 487 Gene3D G3DSA:3.40.50.300 84 234 5.4E-30 T 12-10-2018 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 Gene3D G3DSA:2.40.30.10 214 343 9.6E-52 T 12-10-2018 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 7 403 8.0E-223 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 SUPERFAMILY SSF52540 13 227 6.49E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 Pfam PF03144 Elongation factor Tu domain 2 233 302 1.9E-14 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 Gene3D G3DSA:3.40.50.300 8 211 1.2E-67 T 12-10-2018 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 SUPERFAMILY SSF50465 311 403 4.6E-36 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 Pfam PF00009 Elongation factor Tu GTP binding domain 16 209 8.6E-60 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 PRINTS PR00315 GTP-binding elongation factor signature 20 33 3.4E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.4E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.4E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 PRINTS PR00315 GTP-binding elongation factor signature 101 112 3.4E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 PRINTS PR00315 GTP-binding elongation factor signature 138 147 3.4E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 SUPERFAMILY SSF50447 213 310 2.29E-28 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 19 153 2.9E-15 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 Pfam PF03143 Elongation factor Tu C-terminal domain 307 401 9.8E-34 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 Hamap MF_00118_B Elongation factor Tu [tuf]. 7 403 59.696 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_4494 831867ca78a185fcb8aba13a2554fde6 403 Gene3D G3DSA:2.40.30.10 347 402 1.3E-28 T 12-10-2018 Amet_2454 f9d18f4f371f43c7d19b7d2f47106823 146 TIGRFAM TIGR03419 NifU_clost: FeS cluster assembly scaffold protein NifU 2 121 9.1E-68 T 12-10-2018 IPR017787 NIF system FeS cluster assembly, NifU-like Amet_2454 f9d18f4f371f43c7d19b7d2f47106823 146 Gene3D G3DSA:3.90.1010.10 1 145 7.2E-62 T 12-10-2018 Amet_2454 f9d18f4f371f43c7d19b7d2f47106823 146 Pfam PF01592 NifU-like N terminal domain 1 122 3.6E-52 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Amet_2454 f9d18f4f371f43c7d19b7d2f47106823 146 SUPERFAMILY SSF82649 4 124 9.42E-48 T 12-10-2018 Amet_2649 9fb1a2bac25c7a21d4730ac47db8873b 284 TIGRFAM TIGR00417 speE: spermidine synthase 4 274 5.7E-95 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Amet_2649 9fb1a2bac25c7a21d4730ac47db8873b 284 Pfam PF17284 Spermidine synthase tetramerisation domain 3 55 3.2E-16 T 12-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Amet_2649 9fb1a2bac25c7a21d4730ac47db8873b 284 Gene3D G3DSA:3.40.50.150 53 281 4.6E-78 T 12-10-2018 Amet_2649 9fb1a2bac25c7a21d4730ac47db8873b 284 Pfam PF01564 Spermine/spermidine synthase domain 58 238 3.6E-58 T 12-10-2018 Amet_2649 9fb1a2bac25c7a21d4730ac47db8873b 284 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 280 40.517 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Amet_2649 9fb1a2bac25c7a21d4730ac47db8873b 284 SUPERFAMILY SSF53335 3 280 1.27E-83 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2649 9fb1a2bac25c7a21d4730ac47db8873b 284 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 12-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Amet_2649 9fb1a2bac25c7a21d4730ac47db8873b 284 Gene3D G3DSA:2.30.140.10 1 52 4.7E-23 T 12-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Amet_3553 0a9c8a23e06dfdd6f7464af995bdb161 635 Pfam PF02687 FtsX-like permease family 85 176 1.2E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_3553 0a9c8a23e06dfdd6f7464af995bdb161 635 PIRSF PIRSF018968 1 634 2.3E-247 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 Amet_0064 cb14851ac2221adc332f87b319ef84f7 124 Pfam PF01903 CbiX 10 117 3.2E-26 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Amet_0064 cb14851ac2221adc332f87b319ef84f7 124 SUPERFAMILY SSF53800 1 123 1.7E-27 T 12-10-2018 Amet_0064 cb14851ac2221adc332f87b319ef84f7 124 Gene3D G3DSA:3.40.50.1400 1 124 1.1E-28 T 12-10-2018 Amet_0074 9f43295effa39aea1ffce06edeffa30d 255 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 10 24 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amet_0074 9f43295effa39aea1ffce06edeffa30d 255 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 211 1.2E-50 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amet_0074 9f43295effa39aea1ffce06edeffa30d 255 SUPERFAMILY SSF53790 5 251 6.28E-72 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amet_0074 9f43295effa39aea1ffce06edeffa30d 255 Gene3D G3DSA:3.40.1010.10 3 114 1.8E-31 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amet_0074 9f43295effa39aea1ffce06edeffa30d 255 Gene3D G3DSA:3.30.950.10 115 234 1.2E-51 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amet_0074 9f43295effa39aea1ffce06edeffa30d 255 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 7 251 2.8E-108 T 12-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 Amet_0659 3b8f7b862d6b280b8505589ca8841aad 441 SMART SM00304 83 135 7.1E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0659 3b8f7b862d6b280b8505589ca8841aad 441 SMART SM00283 150 440 8.1E-19 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0659 3b8f7b862d6b280b8505589ca8841aad 441 Gene3D G3DSA:1.10.287.950 132 440 2.3E-53 T 12-10-2018 Amet_0659 3b8f7b862d6b280b8505589ca8841aad 441 SUPERFAMILY SSF58104 103 440 1.7E-52 T 12-10-2018 Amet_0659 3b8f7b862d6b280b8505589ca8841aad 441 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 220 362 6.1E-25 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2940 e1b1d650347f642dc2bd0a5bb332a829 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 177 1.7E-37 T 12-10-2018 Amet_2940 e1b1d650347f642dc2bd0a5bb332a829 206 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 71 171 4.0E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_2940 e1b1d650347f642dc2bd0a5bb332a829 206 Gene3D G3DSA:3.40.50.1000 5 198 1.3E-40 T 12-10-2018 IPR023214 HAD superfamily Amet_2940 e1b1d650347f642dc2bd0a5bb332a829 206 Gene3D G3DSA:1.10.150.240 16 80 1.3E-40 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amet_2940 e1b1d650347f642dc2bd0a5bb332a829 206 SUPERFAMILY SSF56784 1 206 3.6E-45 T 12-10-2018 IPR036412 HAD-like superfamily Amet_3462 eb0c7f4734ee900d9cea6fc4aea79756 164 Gene3D G3DSA:3.30.70.860 7 164 3.7E-59 T 12-10-2018 IPR035571 UPF0234-like, C-terminal Amet_3462 eb0c7f4734ee900d9cea6fc4aea79756 164 Pfam PF04461 Protein of unknown function (DUF520) 6 164 3.0E-61 T 12-10-2018 IPR007551 Protein of unknown function DUF520 Amet_3462 eb0c7f4734ee900d9cea6fc4aea79756 164 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 5 164 25.3 T 12-10-2018 IPR007551 Protein of unknown function DUF520 Amet_3462 eb0c7f4734ee900d9cea6fc4aea79756 164 Gene3D G3DSA:3.30.70.990 13 102 3.7E-59 T 12-10-2018 IPR035570 UPF0234, N-terminal Amet_3462 eb0c7f4734ee900d9cea6fc4aea79756 164 SUPERFAMILY SSF89963 93 164 3.53E-27 T 12-10-2018 IPR036183 YajQ-like superfamily Amet_3462 eb0c7f4734ee900d9cea6fc4aea79756 164 SUPERFAMILY SSF89963 6 90 2.04E-27 T 12-10-2018 IPR036183 YajQ-like superfamily Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 186 208 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 SUPERFAMILY SSF55347 140 305 3.33E-56 T 12-10-2018 Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 SUPERFAMILY SSF55021 352 422 2.0E-11 T 12-10-2018 Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 Gene3D G3DSA:3.30.70.260 348 419 2.9E-162 T 12-10-2018 Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 13 132 7.1E-21 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 Pfam PF01842 ACT domain 353 418 1.2E-10 T 12-10-2018 IPR002912 ACT domain Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 SUPERFAMILY SSF51735 6 161 9.51E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 Gene3D G3DSA:3.40.50.720 7 343 2.9E-162 T 12-10-2018 Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 PIRSF PIRSF000098 4 432 2.1E-172 T 12-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 Pfam PF00742 Homoserine dehydrogenase 140 318 3.4E-67 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Amet_0566 ee3a77e34909f51c3cc22b51e305cc81 432 Gene3D G3DSA:3.30.360.10 139 347 2.9E-162 T 12-10-2018 Amet_2788 07099441570528c98bfa4e4d11b40e0a 398 SUPERFAMILY SSF102645 185 396 7.19E-78 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Amet_2788 07099441570528c98bfa4e4d11b40e0a 398 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 369 9.3E-74 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Amet_2788 07099441570528c98bfa4e4d11b40e0a 398 Gene3D G3DSA:3.40.50.10300 187 398 1.0E-83 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Amet_2788 07099441570528c98bfa4e4d11b40e0a 398 Pfam PF02441 Flavoprotein 6 177 1.9E-45 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Amet_2788 07099441570528c98bfa4e4d11b40e0a 398 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 393 7.1E-145 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Amet_2788 07099441570528c98bfa4e4d11b40e0a 398 Gene3D G3DSA:3.40.50.1950 1 186 1.2E-60 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amet_2788 07099441570528c98bfa4e4d11b40e0a 398 SUPERFAMILY SSF52507 2 177 2.62E-60 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amet_3049 9f0242904e3c720001129282b7780ccc 202 PRINTS PR00773 GrpE protein signature 155 170 2.2E-22 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amet_3049 9f0242904e3c720001129282b7780ccc 202 PRINTS PR00773 GrpE protein signature 101 116 2.2E-22 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amet_3049 9f0242904e3c720001129282b7780ccc 202 PRINTS PR00773 GrpE protein signature 73 89 2.2E-22 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amet_3049 9f0242904e3c720001129282b7780ccc 202 PRINTS PR00773 GrpE protein signature 181 200 2.2E-22 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amet_3049 9f0242904e3c720001129282b7780ccc 202 Gene3D G3DSA:2.30.22.10 147 202 5.1E-21 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Amet_3049 9f0242904e3c720001129282b7780ccc 202 SUPERFAMILY SSF51064 149 202 7.06E-15 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Amet_3049 9f0242904e3c720001129282b7780ccc 202 Hamap MF_01151 Protein GrpE [grpE]. 4 202 19.11 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amet_3049 9f0242904e3c720001129282b7780ccc 202 Pfam PF01025 GrpE 40 202 4.5E-47 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amet_3049 9f0242904e3c720001129282b7780ccc 202 SUPERFAMILY SSF58014 51 147 3.4E-23 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Amet_3049 9f0242904e3c720001129282b7780ccc 202 Gene3D G3DSA:3.90.20.20 32 146 5.3E-21 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Amet_3660 2ce58592220aa472da95d5fcdb204589 227 Gene3D G3DSA:1.10.3720.10 10 224 1.7E-56 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3660 2ce58592220aa472da95d5fcdb204589 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 211 6.8E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_3660 2ce58592220aa472da95d5fcdb204589 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 117 1.0E-31 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Amet_3660 2ce58592220aa472da95d5fcdb204589 227 SUPERFAMILY SSF161098 21 211 2.35E-46 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 Gene3D G3DSA:3.30.930.10 100 421 1.8E-99 T 12-10-2018 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 Gene3D G3DSA:2.40.50.140 1 98 2.4E-21 T 12-10-2018 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 Pfam PF00152 tRNA synthetases class II (D, K and N) 113 426 4.0E-81 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 TIGRFAM TIGR00458 aspS_nondisc: aspartate--tRNA(Asn) ligase 16 432 6.8E-130 T 12-10-2018 IPR004523 Aspartate-tRNA synthetase, type 2 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 Pfam PF01336 OB-fold nucleic acid binding domain 19 89 1.1E-12 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 347 363 2.6E-19 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 182 194 2.6E-19 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 199 212 2.6E-19 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 401 2.6E-19 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 SUPERFAMILY SSF55681 112 426 2.49E-85 T 12-10-2018 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 Hamap MF_02075 Aspartate--tRNA(Asp) ligase [aspS]. 3 432 39.648 T 12-10-2018 IPR004523 Aspartate-tRNA synthetase, type 2 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_3390 d6bd0e4e9ab4a94b690e90a076cd8f64 432 SUPERFAMILY SSF50249 3 95 4.5E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_1441 0ec7e987fe77de216ababb24865117f1 356 Pfam PF08713 DNA alkylation repair enzyme 119 216 1.5E-4 T 12-10-2018 IPR014825 DNA alkylation repair enzyme Amet_1441 0ec7e987fe77de216ababb24865117f1 356 Gene3D G3DSA:1.25.40.290 124 242 2.1E-39 T 12-10-2018 Amet_1441 0ec7e987fe77de216ababb24865117f1 356 SUPERFAMILY SSF48371 26 242 7.97E-49 T 12-10-2018 IPR016024 Armadillo-type fold Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 Pfam PF00694 Aconitase C-terminal domain 518 572 1.2E-24 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 Gene3D G3DSA:3.30.499.10 270 444 3.8E-49 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 PRINTS PR00415 Aconitase family signature 186 199 6.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 PRINTS PR00415 Aconitase family signature 90 98 6.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 PRINTS PR00415 Aconitase family signature 349 362 6.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 PRINTS PR00415 Aconitase family signature 200 213 6.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 PRINTS PR00415 Aconitase family signature 124 139 6.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 PRINTS PR00415 Aconitase family signature 110 123 6.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 639 7.1E-257 T 12-10-2018 IPR006250 Aconitase, putative Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 SUPERFAMILY SSF53732 1 415 6.8E-142 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 Gene3D G3DSA:3.20.19.10 461 643 5.0E-43 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 Gene3D G3DSA:3.30.499.20 4 266 1.4E-82 T 12-10-2018 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 Pfam PF00330 Aconitase family (aconitate hydratase) 8 407 1.3E-105 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_1320 e76e98234deae0b551acaf0e3076ebc1 645 SUPERFAMILY SSF52016 439 639 1.28E-50 T 12-10-2018 Amet_4190 88f904e0a86b28fbc14a133de92f20dc 283 SUPERFAMILY SSF53697 94 279 1.7E-46 T 12-10-2018 Amet_4190 88f904e0a86b28fbc14a133de92f20dc 283 Pfam PF01380 SIS domain 129 257 1.7E-26 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amet_4190 88f904e0a86b28fbc14a133de92f20dc 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 76 2.6E-22 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Amet_4190 88f904e0a86b28fbc14a133de92f20dc 283 Gene3D G3DSA:1.10.10.10 1 77 4.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4190 88f904e0a86b28fbc14a133de92f20dc 283 SUPERFAMILY SSF46689 3 74 1.45E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4190 88f904e0a86b28fbc14a133de92f20dc 283 Gene3D G3DSA:3.40.50.10490 96 282 2.6E-53 T 12-10-2018 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 Gene3D G3DSA:3.90.110.10 169 443 1.1E-101 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 SUPERFAMILY SSF51735 3 168 8.73E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 410 1.1E-51 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 Gene3D G3DSA:3.40.50.720 1 168 2.3E-68 T 12-10-2018 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.6E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 1.6E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 1.6E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 1.6E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 1.6E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 1.6E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 1.6E-48 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 Pfam PF02056 Family 4 glycosyl hydrolase 5 185 4.9E-63 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 140 170 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 Amet_4185 cdffdfb3d9d156141dc669f7d3327db9 444 SUPERFAMILY SSF56327 171 437 1.79E-87 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Amet_3058 28e99854d07167aaad85a9b52f2d5658 488 Pfam PF03772 Competence protein 220 482 3.4E-63 T 12-10-2018 IPR004477 ComEC/Rec2-related protein Amet_3058 28e99854d07167aaad85a9b52f2d5658 488 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 241 413 6.6E-32 T 12-10-2018 IPR004477 ComEC/Rec2-related protein Amet_1120 ed827dc5993446e4fd60849c91c7a022 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 292 2.5E-14 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_1120 ed827dc5993446e4fd60849c91c7a022 327 Pfam PF00005 ABC transporter 20 179 9.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1120 ed827dc5993446e4fd60849c91c7a022 327 SUPERFAMILY SSF52540 4 250 1.85E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1120 ed827dc5993446e4fd60849c91c7a022 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 311 1.3E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_1120 ed827dc5993446e4fd60849c91c7a022 327 Gene3D G3DSA:3.40.50.300 2 323 7.6E-87 T 12-10-2018 Amet_1120 ed827dc5993446e4fd60849c91c7a022 327 SMART SM00382 29 228 1.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 SUPERFAMILY SSF52540 648 892 2.79E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 Gene3D G3DSA:1.20.120.850 914 1136 2.2E-89 T 12-10-2018 Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 Gene3D G3DSA:3.40.50.10810 648 891 1.9E-66 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 Pfam PF08455 Bacterial SNF2 helicase associated 292 673 1.1E-92 T 12-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 Gene3D G3DSA:3.40.50.300 899 1100 2.2E-89 T 12-10-2018 Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 SUPERFAMILY SSF52540 894 1141 3.16E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 Pfam PF00176 SNF2 family N-terminal domain 698 964 1.5E-59 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 Pfam PF04434 SWIM zinc finger 129 154 1.4E-6 T 12-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 SMART SM00487 676 860 1.0E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 Pfam PF00271 Helicase conserved C-terminal domain 981 1086 4.3E-21 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_0594 6bef15534a4ec345894cd9d47595fe13 1141 SMART SM00490 1004 1086 7.1E-26 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_2291 b73d5d3ecbfdd6bfa8ec52cdb59e43e0 280 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 10 274 5.8E-31 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Amet_2291 b73d5d3ecbfdd6bfa8ec52cdb59e43e0 280 Gene3D G3DSA:2.40.10.350 184 260 7.1E-39 T 12-10-2018 Amet_2291 b73d5d3ecbfdd6bfa8ec52cdb59e43e0 280 PIRSF PIRSF038471 1 279 9.8E-58 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Amet_2291 b73d5d3ecbfdd6bfa8ec52cdb59e43e0 280 Gene3D G3DSA:2.40.10.340 125 271 7.1E-39 T 12-10-2018 Amet_2291 b73d5d3ecbfdd6bfa8ec52cdb59e43e0 280 Pfam PF04085 rod shape-determining protein MreC 127 272 4.9E-37 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Amet_1798 66d94cd57801661a17eb2dd73527922a 187 Gene3D G3DSA:1.10.10.10 112 178 2.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1798 66d94cd57801661a17eb2dd73527922a 187 Gene3D G3DSA:1.10.1740.10 2 111 1.8E-19 T 12-10-2018 Amet_1798 66d94cd57801661a17eb2dd73527922a 187 SUPERFAMILY SSF88659 110 175 1.03E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_1798 66d94cd57801661a17eb2dd73527922a 187 SUPERFAMILY SSF88946 14 98 8.24E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1798 66d94cd57801661a17eb2dd73527922a 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 176 3.9E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_1798 66d94cd57801661a17eb2dd73527922a 187 Pfam PF08281 Sigma-70, region 4 120 172 2.0E-17 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_1798 66d94cd57801661a17eb2dd73527922a 187 Pfam PF04542 Sigma-70 region 2 19 86 2.7E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1680 0d6029d4e68fca94bde2d18f2d7e0b51 159 Gene3D G3DSA:3.10.400.10 1 159 1.2E-57 T 12-10-2018 Amet_1680 0d6029d4e68fca94bde2d18f2d7e0b51 159 PIRSF PIRSF021320 4 159 3.8E-48 T 12-10-2018 IPR009326 Protein of unknown function DUF984 Amet_1680 0d6029d4e68fca94bde2d18f2d7e0b51 159 Pfam PF04266 ASCH domain 45 158 2.9E-28 T 12-10-2018 IPR007374 ASCH domain Amet_1680 0d6029d4e68fca94bde2d18f2d7e0b51 159 SMART SM01022 35 158 7.3E-44 T 12-10-2018 IPR007374 ASCH domain Amet_1680 0d6029d4e68fca94bde2d18f2d7e0b51 159 SUPERFAMILY SSF88697 6 158 1.81E-48 T 12-10-2018 IPR015947 PUA-like superfamily Amet_2749 d176707449c67b26b1fd47a01920978a 423 Gene3D G3DSA:1.20.120.140 121 418 6.2E-117 T 12-10-2018 Amet_2749 d176707449c67b26b1fd47a01920978a 423 SMART SM00962 219 420 1.6E-115 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2749 d176707449c67b26b1fd47a01920978a 423 Pfam PF02881 SRP54-type protein, helical bundle domain 136 201 3.0E-15 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2749 d176707449c67b26b1fd47a01920978a 423 Gene3D G3DSA:3.40.50.300 219 408 6.2E-117 T 12-10-2018 Amet_2749 d176707449c67b26b1fd47a01920978a 423 Pfam PF00448 SRP54-type protein, GTPase domain 220 419 8.8E-79 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2749 d176707449c67b26b1fd47a01920978a 423 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 393 406 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2749 d176707449c67b26b1fd47a01920978a 423 SUPERFAMILY SSF47364 119 199 3.53E-23 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Amet_2749 d176707449c67b26b1fd47a01920978a 423 SMART SM00963 124 205 8.4E-27 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2749 d176707449c67b26b1fd47a01920978a 423 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 148 420 63.01 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Amet_2749 d176707449c67b26b1fd47a01920978a 423 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 148 419 1.1E-112 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Amet_2749 d176707449c67b26b1fd47a01920978a 423 SUPERFAMILY SSF52540 217 420 1.1E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2749 d176707449c67b26b1fd47a01920978a 423 SMART SM00382 218 410 1.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4523 9ef300a6a0ec58b95b13bc94a0bc153b 281 SUPERFAMILY SSF51735 2 181 8.7E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4523 9ef300a6a0ec58b95b13bc94a0bc153b 281 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2 180 1.5E-66 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amet_4523 9ef300a6a0ec58b95b13bc94a0bc153b 281 Gene3D G3DSA:3.40.50.720 1 185 7.2E-72 T 12-10-2018 Amet_4523 9ef300a6a0ec58b95b13bc94a0bc153b 281 SUPERFAMILY SSF48179 182 280 1.62E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_4523 9ef300a6a0ec58b95b13bc94a0bc153b 281 Gene3D G3DSA:1.10.1040.10 186 281 3.7E-36 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amet_4523 9ef300a6a0ec58b95b13bc94a0bc153b 281 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 180 204 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amet_4523 9ef300a6a0ec58b95b13bc94a0bc153b 281 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 183 279 3.4E-35 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Amet_4523 9ef300a6a0ec58b95b13bc94a0bc153b 281 PIRSF PIRSF000105 1 281 3.2E-94 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Amet_2159 824c79543b3ba90fbe17115ac310a348 272 Pfam PF01063 Amino-transferase class IV 29 244 2.7E-52 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Amet_2159 824c79543b3ba90fbe17115ac310a348 272 Gene3D G3DSA:3.30.470.10 1 108 7.7E-23 T 12-10-2018 Amet_2159 824c79543b3ba90fbe17115ac310a348 272 ProSitePatterns PS00770 Aminotransferases class-IV signature. 170 199 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Amet_2159 824c79543b3ba90fbe17115ac310a348 272 Gene3D G3DSA:3.20.10.10 113 267 5.7E-51 T 12-10-2018 Amet_2159 824c79543b3ba90fbe17115ac310a348 272 SUPERFAMILY SSF56752 1 267 2.49E-69 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Amet_4438 65630ef27eafad9ee0daf77afcc15253 286 Pfam PF04748 Divergent polysaccharide deacetylase 64 281 2.2E-76 T 12-10-2018 IPR006837 Divergent polysaccharide deacetylase Amet_4438 65630ef27eafad9ee0daf77afcc15253 286 Gene3D G3DSA:3.20.20.370 59 282 5.0E-79 T 12-10-2018 Amet_4438 65630ef27eafad9ee0daf77afcc15253 286 SUPERFAMILY SSF88713 59 281 8.9E-68 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amet_2753 134ae55647cd006b5c560889dad155c6 414 Gene3D G3DSA:3.40.47.10 256 400 8.1E-58 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_2753 134ae55647cd006b5c560889dad155c6 414 ProSitePatterns PS00018 EF-hand calcium-binding domain. 55 67 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amet_2753 134ae55647cd006b5c560889dad155c6 414 SUPERFAMILY SSF53901 2 251 1.34E-82 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_2753 134ae55647cd006b5c560889dad155c6 414 SMART SM00825 Beta-ketoacyl synthase 5 413 4.2E-18 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Amet_2753 134ae55647cd006b5c560889dad155c6 414 PIRSF PIRSF000447 1 413 3.8E-191 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Amet_2753 134ae55647cd006b5c560889dad155c6 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site Amet_2753 134ae55647cd006b5c560889dad155c6 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 5.3E-42 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Amet_2753 134ae55647cd006b5c560889dad155c6 414 SUPERFAMILY SSF53901 214 411 1.09E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_2753 134ae55647cd006b5c560889dad155c6 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 7.9E-205 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Amet_2753 134ae55647cd006b5c560889dad155c6 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 3.5E-65 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Amet_2753 134ae55647cd006b5c560889dad155c6 414 Gene3D G3DSA:3.40.47.10 1 255 9.4E-104 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 Pfam PF02574 Homocysteine S-methyltransferase 12 281 5.9E-60 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 Pfam PF02607 B12 binding domain 583 652 1.8E-14 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 PIRSF PIRSF037472 1 787 0.0 T 12-10-2018 IPR017215 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 SUPERFAMILY SSF82282 3 353 3.92E-107 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 Gene3D G3DSA:3.20.20.330 2 293 4.6E-95 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 SMART SM01018 580 661 6.3E-20 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 SUPERFAMILY SSF51717 311 568 2.22E-81 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 Gene3D G3DSA:1.10.1240.10 572 659 1.5E-15 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 Pfam PF02310 B12 binding domain 667 768 5.9E-21 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 Gene3D G3DSA:3.40.50.280 664 788 4.0E-41 T 12-10-2018 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 SUPERFAMILY SSF52242 664 784 5.49E-36 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 SUPERFAMILY SSF47644 580 653 1.57E-13 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 Gene3D G3DSA:3.20.20.20 309 571 1.5E-92 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_3373 0a6af5de8d5147c268522467b1c691c1 789 Pfam PF00809 Pterin binding enzyme 314 534 6.6E-30 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_1627 5e60115a8faaeec7f48d2139d44b80cb 66 SMART SM00357 3 66 8.3E-31 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Amet_1627 5e60115a8faaeec7f48d2139d44b80cb 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.3E-32 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amet_1627 5e60115a8faaeec7f48d2139d44b80cb 66 PRINTS PR00050 Cold shock protein signature 24 33 1.9E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amet_1627 5e60115a8faaeec7f48d2139d44b80cb 66 PRINTS PR00050 Cold shock protein signature 39 57 1.9E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amet_1627 5e60115a8faaeec7f48d2139d44b80cb 66 PRINTS PR00050 Cold shock protein signature 4 19 1.9E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amet_1627 5e60115a8faaeec7f48d2139d44b80cb 66 SUPERFAMILY SSF50249 1 64 8.7E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_1627 5e60115a8faaeec7f48d2139d44b80cb 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site Amet_1627 5e60115a8faaeec7f48d2139d44b80cb 66 Gene3D G3DSA:2.40.50.140 1 65 1.6E-31 T 12-10-2018 Amet_1627 5e60115a8faaeec7f48d2139d44b80cb 66 PIRSF PIRSF002599 1 66 4.4E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 Pfam PF01368 DHH family 3 373 3.7E-27 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 Pfam PF07085 DRTGG domain 135 236 1.2E-20 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 Gene3D G3DSA:3.10.310.20 417 537 1.2E-35 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 Gene3D G3DSA:3.90.1640.10 1 74 3.1E-18 T 12-10-2018 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 Gene3D G3DSA:3.90.1640.10 256 416 3.1E-45 T 12-10-2018 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 Gene3D G3DSA:3.10.580.10 75 124 5.6E-5 T 12-10-2018 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 Gene3D G3DSA:3.40.1390.20 125 236 7.8E-28 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 Pfam PF00571 CBS domain 245 291 1.1E-4 T 12-10-2018 IPR000644 CBS domain Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 Pfam PF02833 DHHA2 domain 410 532 2.2E-18 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 SUPERFAMILY SSF54631 78 292 6.92E-15 T 12-10-2018 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 SUPERFAMILY SSF75138 131 243 3.92E-20 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 SMART SM01131 408 533 2.2E-48 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_1702 cf4e83485a29854f4392e1f2a12ca44a 537 SUPERFAMILY SSF64182 3 532 3.4E-67 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily Amet_0550 e4cf6c695eda894fa9d259531f5e983c 344 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 47 321 1.6E-73 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Amet_0550 e4cf6c695eda894fa9d259531f5e983c 344 Gene3D G3DSA:3.40.190.170 42 344 3.4E-91 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Amet_0550 e4cf6c695eda894fa9d259531f5e983c 344 PIRSF PIRSF006470 11 343 2.4E-71 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Amet_0550 e4cf6c695eda894fa9d259531f5e983c 344 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 47 302 8.0E-56 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Amet_4482 06591abf14be1f1c486d3dee55ef0c56 156 SUPERFAMILY SSF47973 7 149 5.49E-61 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Amet_4482 06591abf14be1f1c486d3dee55ef0c56 156 Gene3D G3DSA:1.10.455.10 2 156 5.4E-62 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Amet_4482 06591abf14be1f1c486d3dee55ef0c56 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4482 06591abf14be1f1c486d3dee55ef0c56 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.977 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Amet_4482 06591abf14be1f1c486d3dee55ef0c56 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.3E-67 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Amet_4482 06591abf14be1f1c486d3dee55ef0c56 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 3.8E-66 T 12-10-2018 IPR023798 Ribosomal protein S7 domain Amet_4482 06591abf14be1f1c486d3dee55ef0c56 156 PIRSF PIRSF002122 4 156 1.3E-56 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 621 5.6E-182 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 Pfam PF08264 Anticodon-binding domain of tRNA 676 823 2.7E-31 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 SUPERFAMILY SSF50677 201 384 7.64E-45 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 2 1021 13.548 T 12-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 SUPERFAMILY SSF52374 12 636 1.2E-133 T 12-10-2018 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 382 397 3.1E-28 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 42 53 3.1E-28 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 548 557 3.1E-28 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 508 521 3.1E-28 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 221 244 3.1E-28 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 SUPERFAMILY SSF47323 644 879 1.55E-54 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 Gene3D G3DSA:3.40.50.620 16 615 1.1E-245 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 830 2.2E-288 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 Gene3D G3DSA:1.10.730.10 630 814 1.5E-51 T 12-10-2018 Amet_3114 9e13cd12a17f3a46a0c9058873b26f84 1033 Gene3D G3DSA:3.90.740.10 198 388 1.1E-245 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 1.4E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 SUPERFAMILY SSF52172 5 135 7.4E-33 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 Pfam PF00072 Response regulator receiver domain 8 120 6.8E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 Gene3D G3DSA:3.40.50.12740 6 211 8.6E-65 T 12-10-2018 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 SMART SM00421 148 205 1.9E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 SUPERFAMILY SSF46894 147 210 2.18E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 SMART SM00448 6 119 1.6E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1584 fb6d26a798bef00b7aef993d520a020a 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.0E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_2643 72b962582babbb13f8c9decfad2adcb1 377 Gene3D G3DSA:3.40.710.10 27 275 1.1E-82 T 12-10-2018 Amet_2643 72b962582babbb13f8c9decfad2adcb1 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 6.4E-13 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_2643 72b962582babbb13f8c9decfad2adcb1 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 6.4E-13 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_2643 72b962582babbb13f8c9decfad2adcb1 377 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 6.4E-13 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_2643 72b962582babbb13f8c9decfad2adcb1 377 Gene3D G3DSA:2.60.410.10 276 362 1.0E-12 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2643 72b962582babbb13f8c9decfad2adcb1 377 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 38 256 1.3E-57 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Amet_2643 72b962582babbb13f8c9decfad2adcb1 377 SUPERFAMILY SSF56601 31 312 5.85E-63 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_2643 72b962582babbb13f8c9decfad2adcb1 377 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 362 1.8E-12 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2643 72b962582babbb13f8c9decfad2adcb1 377 SMART SM00936 273 363 7.2E-14 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2851 bfa7ba9eaa84c620582f913fdd4cba45 58 Gene3D G3DSA:1.10.260.40 3 58 2.4E-10 T 12-10-2018 Amet_2851 bfa7ba9eaa84c620582f913fdd4cba45 58 SUPERFAMILY SSF47413 4 51 1.48E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2851 bfa7ba9eaa84c620582f913fdd4cba45 58 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 57 9.8E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_4099 488bd410f475ab45fda8977840cb9cba 348 Gene3D G3DSA:3.10.20.740 1 123 6.2E-47 T 12-10-2018 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 Pfam PF14697 4Fe-4S dicluster domain 142 202 1.6E-9 T 12-10-2018 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 3.3E-19 T 12-10-2018 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 Gene3D G3DSA:3.40.50.740 278 348 1.3E-23 T 12-10-2018 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 SUPERFAMILY SSF54292 1 74 1.24E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 218 270 6.7E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 SMART SM00929 83 123 1.5E-20 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 SUPERFAMILY SSF53706 187 347 7.46E-55 T 12-10-2018 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 SMART SM00926 217 270 9.4E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 222 240 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 Gene3D G3DSA:2.20.25.90 217 270 1.9E-21 T 12-10-2018 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 SUPERFAMILY SSF54862 75 208 6.28E-39 T 12-10-2018 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 2.4E-19 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 Pfam PF00384 Molybdopterin oxidoreductase 273 348 4.1E-16 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4099 488bd410f475ab45fda8977840cb9cba 348 Gene3D G3DSA:3.30.70.20 125 207 6.0E-27 T 12-10-2018 Amet_4321 bd807b40551a9f91785373812ad05679 211 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 5 210 1.8E-52 T 12-10-2018 IPR014205 Sporulation protein YtaF Amet_4321 bd807b40551a9f91785373812ad05679 211 Pfam PF02659 Putative manganese efflux pump 98 207 1.1E-12 T 12-10-2018 IPR003810 Putative manganese efflux pump Amet_4321 bd807b40551a9f91785373812ad05679 211 Pfam PF02659 Putative manganese efflux pump 5 80 3.1E-9 T 12-10-2018 IPR003810 Putative manganese efflux pump Amet_3793 301734b6ef66c56ca2996d415395d0ae 253 SMART SM01321 9 123 8.7E-43 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_3793 301734b6ef66c56ca2996d415395d0ae 253 Gene3D G3DSA:3.30.70.1290 1 165 1.7E-44 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3793 301734b6ef66c56ca2996d415395d0ae 253 Pfam PF01797 Transposase IS200 like 13 123 4.0E-19 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_3793 301734b6ef66c56ca2996d415395d0ae 253 SUPERFAMILY SSF143422 1 129 9.42E-28 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_4367 4727943036d5eda85d20ecfd552dc164 162 SUPERFAMILY SSF82679 1 98 3.92E-16 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_4367 4727943036d5eda85d20ecfd552dc164 162 Gene3D G3DSA:2.30.30.30 104 160 5.9E-12 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amet_4367 4727943036d5eda85d20ecfd552dc164 162 SMART SM00738 1 95 7.0E-8 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_4367 4727943036d5eda85d20ecfd552dc164 162 Pfam PF00467 KOW motif 111 138 5.6E-5 T 12-10-2018 IPR005824 KOW Amet_4367 4727943036d5eda85d20ecfd552dc164 162 Pfam PF02357 Transcription termination factor nusG 1 91 1.8E-11 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_4367 4727943036d5eda85d20ecfd552dc164 162 Gene3D G3DSA:3.30.70.940 1 100 3.0E-13 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_4367 4727943036d5eda85d20ecfd552dc164 162 SUPERFAMILY SSF50104 106 158 5.16E-10 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amet_0414 4727943036d5eda85d20ecfd552dc164 162 SUPERFAMILY SSF82679 1 98 3.92E-16 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_0414 4727943036d5eda85d20ecfd552dc164 162 Gene3D G3DSA:2.30.30.30 104 160 5.9E-12 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amet_0414 4727943036d5eda85d20ecfd552dc164 162 SMART SM00738 1 95 7.0E-8 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_0414 4727943036d5eda85d20ecfd552dc164 162 Pfam PF00467 KOW motif 111 138 5.6E-5 T 12-10-2018 IPR005824 KOW Amet_0414 4727943036d5eda85d20ecfd552dc164 162 Pfam PF02357 Transcription termination factor nusG 1 91 1.8E-11 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_0414 4727943036d5eda85d20ecfd552dc164 162 Gene3D G3DSA:3.30.70.940 1 100 3.0E-13 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_0414 4727943036d5eda85d20ecfd552dc164 162 SUPERFAMILY SSF50104 106 158 5.16E-10 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amet_1951 4727943036d5eda85d20ecfd552dc164 162 SUPERFAMILY SSF82679 1 98 3.92E-16 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_1951 4727943036d5eda85d20ecfd552dc164 162 Gene3D G3DSA:2.30.30.30 104 160 5.9E-12 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amet_1951 4727943036d5eda85d20ecfd552dc164 162 SMART SM00738 1 95 7.0E-8 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_1951 4727943036d5eda85d20ecfd552dc164 162 Pfam PF00467 KOW motif 111 138 5.6E-5 T 12-10-2018 IPR005824 KOW Amet_1951 4727943036d5eda85d20ecfd552dc164 162 Pfam PF02357 Transcription termination factor nusG 1 91 1.8E-11 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_1951 4727943036d5eda85d20ecfd552dc164 162 Gene3D G3DSA:3.30.70.940 1 100 3.0E-13 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Amet_1951 4727943036d5eda85d20ecfd552dc164 162 SUPERFAMILY SSF50104 106 158 5.16E-10 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 SUPERFAMILY SSF103190 73 207 5.23E-8 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 Gene3D G3DSA:1.20.1480.50 295 383 8.3E-9 T 12-10-2018 Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 Gene3D G3DSA:1.10.287.950 384 686 7.4E-61 T 12-10-2018 Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 Gene3D G3DSA:3.30.450.20 66 199 1.4E-36 T 12-10-2018 Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 SMART SM00283 411 686 2.0E-47 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 SMART SM00304 327 382 0.0033 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 613 1.4E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 SUPERFAMILY SSF58104 354 686 2.49E-63 T 12-10-2018 Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 Pfam PF00672 HAMP domain 338 378 1.8E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 Pfam PF02743 Cache domain 40 289 5.0E-21 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_0249 7a32d01a0c045a4aaca927085c6f042c 687 Gene3D G3DSA:3.30.450.20 58 294 1.4E-36 T 12-10-2018 Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 SUPERFAMILY SSF50249 4 171 1.59E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 SUPERFAMILY SSF52540 176 439 7.79E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 Gene3D G3DSA:3.40.50.300 202 435 1.6E-87 T 12-10-2018 Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 Gene3D G3DSA:3.40.50.300 443 615 1.0E-61 T 12-10-2018 Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 SMART SM00490 490 575 2.4E-21 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 Pfam PF00270 DEAD/DEAH box helicase 262 419 1.1E-17 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 SUPERFAMILY SSF52540 378 586 3.88E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 Gene3D G3DSA:2.40.50.140 45 142 4.4E-23 T 12-10-2018 Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 Pfam PF00271 Helicase conserved C-terminal domain 453 574 1.2E-19 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 Pfam PF17191 RecG wedge domain 8 170 5.3E-35 T 12-10-2018 IPR033454 RecG, wedge domain Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 26 649 3.9E-234 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Amet_2770 8a0ad20937f54ec3627398ce45fa2085 686 SMART SM00487 255 445 8.1E-32 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_2268 84773de393bd20a3d090c19b6efb8e5b 449 Pfam PF13546 DDE superfamily endonuclease 37 270 9.1E-17 T 12-10-2018 IPR038721 Transposase IS701-like, DDE domain Amet_2268 84773de393bd20a3d090c19b6efb8e5b 449 SUPERFAMILY SSF53098 43 429 5.99E-20 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1535 84773de393bd20a3d090c19b6efb8e5b 449 Pfam PF13546 DDE superfamily endonuclease 37 270 9.1E-17 T 12-10-2018 IPR038721 Transposase IS701-like, DDE domain Amet_1535 84773de393bd20a3d090c19b6efb8e5b 449 SUPERFAMILY SSF53098 43 429 5.99E-20 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_4133 9210c2f261007a3c2df10ea721c837db 787 Gene3D G3DSA:3.30.230.10 549 785 3.3E-97 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_4133 9210c2f261007a3c2df10ea721c837db 787 SUPERFAMILY SSF54211 571 764 6.83E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_4133 9210c2f261007a3c2df10ea721c837db 787 SUPERFAMILY SSF52540 31 544 5.01E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4133 9210c2f261007a3c2df10ea721c837db 787 Gene3D G3DSA:1.10.8.60 458 544 1.6E-12 T 12-10-2018 Amet_4133 9210c2f261007a3c2df10ea721c837db 787 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 657 759 3.5E-9 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Amet_4133 9210c2f261007a3c2df10ea721c837db 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 573 589 4.3E-14 T 12-10-2018 Amet_4133 9210c2f261007a3c2df10ea721c837db 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 684 703 4.3E-14 T 12-10-2018 Amet_4133 9210c2f261007a3c2df10ea721c837db 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 4.3E-14 T 12-10-2018 Amet_4133 9210c2f261007a3c2df10ea721c837db 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 654 673 4.3E-14 T 12-10-2018 Amet_4133 9210c2f261007a3c2df10ea721c837db 787 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 714 732 4.3E-14 T 12-10-2018 Amet_4133 9210c2f261007a3c2df10ea721c837db 787 Pfam PF13654 AAA domain 26 547 3.8E-202 T 12-10-2018 Amet_4133 9210c2f261007a3c2df10ea721c837db 787 Gene3D G3DSA:3.40.50.300 6 167 1.6E-26 T 12-10-2018 Amet_4133 9210c2f261007a3c2df10ea721c837db 787 Gene3D G3DSA:3.40.50.300 259 457 2.0E-60 T 12-10-2018 Amet_3408 50435ea902aea5b2953a75d4de5052d2 295 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 18 290 1.5E-82 T 12-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 Amet_3408 50435ea902aea5b2953a75d4de5052d2 295 Gene3D G3DSA:1.10.4200.10 150 294 3.8E-8 T 12-10-2018 Amet_3408 50435ea902aea5b2953a75d4de5052d2 295 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 15 291 5.3E-93 T 12-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 Amet_3408 50435ea902aea5b2953a75d4de5052d2 295 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 295 153.333 T 12-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 Amet_4291 623d316bc01eb2735cbac5b5c5de6ecc 685 Pfam PF13408 Recombinase zinc beta ribbon domain 331 389 8.4E-11 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_4291 623d316bc01eb2735cbac5b5c5de6ecc 685 Gene3D G3DSA:3.40.50.1390 13 169 8.7E-22 T 12-10-2018 Amet_4291 623d316bc01eb2735cbac5b5c5de6ecc 685 Pfam PF07508 Recombinase 193 315 3.4E-10 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_4291 623d316bc01eb2735cbac5b5c5de6ecc 685 Pfam PF00239 Resolvase, N terminal domain 16 167 9.6E-23 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_4291 623d316bc01eb2735cbac5b5c5de6ecc 685 SUPERFAMILY SSF53041 15 167 2.62E-21 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_4291 623d316bc01eb2735cbac5b5c5de6ecc 685 SMART SM00857 16 168 1.1E-27 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_3543 4da883e5cb2904862a1a1e772923284f 138 Gene3D G3DSA:3.40.50.1980 27 133 9.9E-24 T 12-10-2018 Amet_3543 4da883e5cb2904862a1a1e772923284f 138 PRINTS PR00690 Adhesin family signature 28 46 2.8E-14 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amet_3543 4da883e5cb2904862a1a1e772923284f 138 PRINTS PR00690 Adhesin family signature 59 72 2.8E-14 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amet_3543 4da883e5cb2904862a1a1e772923284f 138 PRINTS PR00690 Adhesin family signature 72 89 2.8E-14 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amet_3543 4da883e5cb2904862a1a1e772923284f 138 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 106 9.9E-21 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Amet_3543 4da883e5cb2904862a1a1e772923284f 138 SUPERFAMILY SSF53807 25 111 3.38E-22 T 12-10-2018 Amet_3543 4da883e5cb2904862a1a1e772923284f 138 PRINTS PR00691 Adhesin B signature 72 91 2.5E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_3543 4da883e5cb2904862a1a1e772923284f 138 PRINTS PR00691 Adhesin B signature 28 49 2.5E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_3543 4da883e5cb2904862a1a1e772923284f 138 PRINTS PR00691 Adhesin B signature 53 71 2.5E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_2719 87f7f7a86284ad504e56219960bfe674 465 Pfam PF02120 Flagellar hook-length control protein FliK 335 415 3.6E-19 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Amet_2719 87f7f7a86284ad504e56219960bfe674 465 PRINTS PR01007 Flagellar hook-length control protein signature 349 367 4.7E-5 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Amet_2719 87f7f7a86284ad504e56219960bfe674 465 PRINTS PR01007 Flagellar hook-length control protein signature 382 405 4.7E-5 T 12-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 Amet_2719 87f7f7a86284ad504e56219960bfe674 465 Gene3D G3DSA:3.30.750.140 315 425 1.6E-18 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Amet_4757 7071d936b7e92bcae34292e3626f331b 599 Pfam PF13426 PAS domain 266 362 6.4E-7 T 12-10-2018 IPR000014 PAS domain Amet_4757 7071d936b7e92bcae34292e3626f331b 599 Gene3D G3DSA:3.30.450.20 27 173 1.2E-5 T 12-10-2018 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 SMART SM00091 254 320 2.2E-5 T 12-10-2018 IPR000014 PAS domain Amet_4757 7071d936b7e92bcae34292e3626f331b 599 SUPERFAMILY SSF55785 242 361 2.44E-10 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4757 7071d936b7e92bcae34292e3626f331b 599 Pfam PF00672 HAMP domain 196 243 8.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 SUPERFAMILY SSF158472 196 245 4.97E-9 T 12-10-2018 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 547 4.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 4.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 533 4.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 4.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 Gene3D G3DSA:1.10.8.500 194 244 2.4E-6 T 12-10-2018 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 SMART SM00388 369 436 1.1E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 SUPERFAMILY SSF55874 426 594 1.01E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4757 7071d936b7e92bcae34292e3626f331b 599 Pfam PF00512 His Kinase A (phospho-acceptor) domain 369 434 1.8E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 SMART SM00304 195 247 6.9E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 Gene3D G3DSA:3.30.565.10 442 597 7.3E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4757 7071d936b7e92bcae34292e3626f331b 599 SUPERFAMILY SSF47384 354 435 4.32E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 SMART SM00387 482 594 3.0E-42 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4757 7071d936b7e92bcae34292e3626f331b 599 Gene3D G3DSA:3.30.450.20 245 364 1.0E-16 T 12-10-2018 Amet_4757 7071d936b7e92bcae34292e3626f331b 599 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 483 592 3.2E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4757 7071d936b7e92bcae34292e3626f331b 599 Gene3D G3DSA:1.10.287.130 365 441 5.3E-26 T 12-10-2018 Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 Gene3D G3DSA:3.30.70.20 29 69 8.8E-7 T 12-10-2018 Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 Gene3D G3DSA:3.40.50.620 70 266 1.5E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 SUPERFAMILY SSF52402 71 260 7.67E-51 T 12-10-2018 Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 SMART SM00893 72 264 2.7E-44 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 PIRSF PIRSF000089 69 392 1.1E-98 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 Pfam PF13237 4Fe-4S dicluster domain 5 50 6.5E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 SUPERFAMILY SSF54862 4 63 9.31E-18 T 12-10-2018 Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 272 353 2.8E-32 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 Pfam PF01012 Electron transfer flavoprotein domain 72 250 1.3E-40 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 Gene3D G3DSA:3.40.50.1220 267 392 7.6E-49 T 12-10-2018 Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 SUPERFAMILY SSF52467 272 389 5.03E-43 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amet_0766 e28d96edb5c0d486c51fcdcb6b02b75c 392 Gene3D G3DSA:3.30.70.20 1 28 2.8E-5 T 12-10-2018 Amet_0165 0887cebd09ddec79f634815bf8230a08 92 Gene3D G3DSA:4.10.520.10 1 92 5.7E-35 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Amet_0165 0887cebd09ddec79f634815bf8230a08 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Amet_0165 0887cebd09ddec79f634815bf8230a08 92 SUPERFAMILY SSF47729 1 91 1.47E-30 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Amet_0165 0887cebd09ddec79f634815bf8230a08 92 SMART SM00411 1 91 4.2E-40 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amet_0165 0887cebd09ddec79f634815bf8230a08 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.4E-33 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amet_0165 0887cebd09ddec79f634815bf8230a08 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.5E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amet_0165 0887cebd09ddec79f634815bf8230a08 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.5E-11 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 SMART SM00354 1 71 3.4E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.2E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.2E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 Gene3D G3DSA:1.10.260.40 1 59 5.3E-21 T 12-10-2018 Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 SUPERFAMILY SSF47413 1 59 6.56E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 Pfam PF13377 Periplasmic binding protein-like domain 167 328 6.9E-36 T 12-10-2018 Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 Gene3D G3DSA:3.40.50.2300 159 288 6.3E-81 T 12-10-2018 Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 SUPERFAMILY SSF53822 61 329 2.86E-83 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.2E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_0455 4ba0f2f53fb09ea64f843cb654d1667e 333 Gene3D G3DSA:3.40.50.2300 66 306 6.3E-81 T 12-10-2018 Amet_0680 2cc4473f304ad31aca895896b31fdda8 334 SUPERFAMILY SSF50129 1 151 2.59E-33 T 12-10-2018 IPR011032 GroES-like superfamily Amet_0680 2cc4473f304ad31aca895896b31fdda8 334 Gene3D G3DSA:3.40.50.720 126 296 5.1E-99 T 12-10-2018 Amet_0680 2cc4473f304ad31aca895896b31fdda8 334 Gene3D G3DSA:3.90.180.10 8 325 5.1E-99 T 12-10-2018 Amet_0680 2cc4473f304ad31aca895896b31fdda8 334 SUPERFAMILY SSF51735 120 266 1.1E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0680 2cc4473f304ad31aca895896b31fdda8 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 1.0E-5 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amet_0680 2cc4473f304ad31aca895896b31fdda8 334 SMART SM00829 10 327 8.9E-49 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Amet_0680 2cc4473f304ad31aca895896b31fdda8 334 Pfam PF00107 Zinc-binding dehydrogenase 157 260 9.4E-29 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amet_4620 cb6c937b3f01842d68afea2277dd0b7a 216 Gene3D G3DSA:1.20.58.220 110 216 7.5E-42 T 12-10-2018 IPR038078 PhoU-like domain superfamily Amet_4620 cb6c937b3f01842d68afea2277dd0b7a 216 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 3 213 7.5E-72 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Amet_4620 cb6c937b3f01842d68afea2277dd0b7a 216 Gene3D G3DSA:1.20.58.220 1 109 1.7E-38 T 12-10-2018 IPR038078 PhoU-like domain superfamily Amet_4620 cb6c937b3f01842d68afea2277dd0b7a 216 SUPERFAMILY SSF109755 2 215 2.62E-73 T 12-10-2018 Amet_4620 cb6c937b3f01842d68afea2277dd0b7a 216 Pfam PF01895 PhoU domain 119 204 1.1E-21 T 12-10-2018 IPR026022 PhoU domain Amet_4620 cb6c937b3f01842d68afea2277dd0b7a 216 Pfam PF01895 PhoU domain 16 103 7.4E-26 T 12-10-2018 IPR026022 PhoU domain Amet_4620 cb6c937b3f01842d68afea2277dd0b7a 216 PIRSF PIRSF003107 1 216 9.2E-76 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Amet_2865 d1886e455c14a977fb71786de0926371 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 585 2.9E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2865 d1886e455c14a977fb71786de0926371 588 SUPERFAMILY SSF55785 233 354 9.95E-12 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2865 d1886e455c14a977fb71786de0926371 588 Gene3D G3DSA:1.10.287.130 356 433 9.9E-27 T 12-10-2018 Amet_2865 d1886e455c14a977fb71786de0926371 588 SMART SM00387 475 587 1.0E-41 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2865 d1886e455c14a977fb71786de0926371 588 Pfam PF00512 His Kinase A (phospho-acceptor) domain 362 428 2.3E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_2865 d1886e455c14a977fb71786de0926371 588 SMART SM00091 245 312 1.3E-5 T 12-10-2018 IPR000014 PAS domain Amet_2865 d1886e455c14a977fb71786de0926371 588 Pfam PF00672 HAMP domain 186 235 2.6E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2865 d1886e455c14a977fb71786de0926371 588 Pfam PF16736 Single Cache-like 34 149 4.5E-11 T 12-10-2018 IPR031967 PhoR, single Cache-like domain Amet_2865 d1886e455c14a977fb71786de0926371 588 SUPERFAMILY SSF158472 186 237 7.32E-11 T 12-10-2018 Amet_2865 d1886e455c14a977fb71786de0926371 588 Pfam PF00989 PAS fold 246 353 3.9E-13 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_2865 d1886e455c14a977fb71786de0926371 588 SUPERFAMILY SSF55874 418 585 6.94E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2865 d1886e455c14a977fb71786de0926371 588 Gene3D G3DSA:1.20.1480.50 153 244 1.0E-12 T 12-10-2018 Amet_2865 d1886e455c14a977fb71786de0926371 588 Gene3D G3DSA:3.30.450.20 247 355 2.8E-15 T 12-10-2018 Amet_2865 d1886e455c14a977fb71786de0926371 588 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 242 361 4.0E-10 T 12-10-2018 IPR000014 PAS domain Amet_2865 d1886e455c14a977fb71786de0926371 588 SMART SM00304 186 238 2.3E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2865 d1886e455c14a977fb71786de0926371 588 SUPERFAMILY SSF47384 347 429 2.94E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_2865 d1886e455c14a977fb71786de0926371 588 Gene3D G3DSA:3.30.450.20 38 148 5.3E-6 T 12-10-2018 Amet_2865 d1886e455c14a977fb71786de0926371 588 SMART SM00388 362 429 8.7E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_2865 d1886e455c14a977fb71786de0926371 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 565 2.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2865 d1886e455c14a977fb71786de0926371 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 584 2.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2865 d1886e455c14a977fb71786de0926371 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 2.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2865 d1886e455c14a977fb71786de0926371 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 2.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2865 d1886e455c14a977fb71786de0926371 588 Gene3D G3DSA:3.30.565.10 436 588 2.4E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2754 2300de44f9f48f62020cc5ec12b0c31c 76 Hamap MF_01217 Acyl carrier protein [acpP]. 1 76 19.479 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amet_2754 2300de44f9f48f62020cc5ec12b0c31c 76 SUPERFAMILY SSF47336 2 75 2.09E-21 T 12-10-2018 IPR036736 ACP-like superfamily Amet_2754 2300de44f9f48f62020cc5ec12b0c31c 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 4.9E-26 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amet_2754 2300de44f9f48f62020cc5ec12b0c31c 76 Pfam PF00550 Phosphopantetheine attachment site 4 72 4.0E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain Amet_2754 2300de44f9f48f62020cc5ec12b0c31c 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 75 4.0E-12 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Amet_2754 2300de44f9f48f62020cc5ec12b0c31c 76 Gene3D G3DSA:1.10.1200.10 1 75 4.3E-25 T 12-10-2018 IPR036736 ACP-like superfamily Amet_1162 5954c95fa864ab24a64d45117e2bd2fb 247 SMART SM00382 31 227 9.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1162 5954c95fa864ab24a64d45117e2bd2fb 247 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 5 247 1.2E-106 T 12-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 Amet_1162 5954c95fa864ab24a64d45117e2bd2fb 247 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1162 5954c95fa864ab24a64d45117e2bd2fb 247 Gene3D G3DSA:3.40.50.300 3 247 5.8E-63 T 12-10-2018 Amet_1162 5954c95fa864ab24a64d45117e2bd2fb 247 Pfam PF00005 ABC transporter 22 178 1.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1162 5954c95fa864ab24a64d45117e2bd2fb 247 SUPERFAMILY SSF52540 5 244 4.75E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 Gene3D G3DSA:3.30.70.270 346 511 2.4E-52 T 12-10-2018 Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 SMART SM00065 197 349 3.6E-15 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 Pfam PF01590 GAF domain 200 338 1.2E-12 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 SUPERFAMILY SSF55073 357 507 1.41E-44 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 Gene3D G3DSA:3.30.450.40 180 345 2.6E-20 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 506 7.6E-50 T 12-10-2018 IPR000160 GGDEF domain Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 SUPERFAMILY SSF55781 200 349 5.45E-22 T 12-10-2018 Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 SUPERFAMILY SSF55781 111 171 1.15E-5 T 12-10-2018 Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 SMART SM00267 341 509 9.6E-51 T 12-10-2018 IPR000160 GGDEF domain Amet_1167 3c21c0e8e330fa7a8359c7ac41c55cc8 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 505 6.8E-45 T 12-10-2018 IPR000160 GGDEF domain Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 SUPERFAMILY SSF46785 4 72 4.34E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 SMART SM00866 86 226 3.6E-19 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 8.6E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 4.6E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 4.6E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 SUPERFAMILY SSF64288 56 228 5.34E-28 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 SMART SM00345 9 68 4.9E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 Gene3D G3DSA:1.10.10.10 4 72 1.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 Pfam PF07702 UTRA domain 93 225 2.1E-21 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amet_2098 af08431ca6b67c97f229d2a0dd7884b5 232 Gene3D G3DSA:3.40.1410.10 73 227 1.6E-24 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amet_0819 0eb030346e0684e8ad70aa3394b6bf32 262 PIRSF PIRSF000090 1 262 5.5E-84 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Amet_0819 0eb030346e0684e8ad70aa3394b6bf32 262 SMART SM00893 22 213 2.7E-51 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0819 0eb030346e0684e8ad70aa3394b6bf32 262 SUPERFAMILY SSF52402 1 256 3.98E-74 T 12-10-2018 Amet_0819 0eb030346e0684e8ad70aa3394b6bf32 262 Pfam PF01012 Electron transfer flavoprotein domain 22 208 2.0E-43 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0819 0eb030346e0684e8ad70aa3394b6bf32 262 Gene3D G3DSA:3.40.50.620 1 261 3.1E-86 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_4533 7636cf07d6043561d24202c8b231781b 465 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_4533 7636cf07d6043561d24202c8b231781b 465 Gene3D G3DSA:1.10.10.60 395 465 2.3E-16 T 12-10-2018 Amet_4533 7636cf07d6043561d24202c8b231781b 465 Gene3D G3DSA:3.30.450.20 7 118 3.0E-14 T 12-10-2018 Amet_4533 7636cf07d6043561d24202c8b231781b 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 2.3E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4533 7636cf07d6043561d24202c8b231781b 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 2.3E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4533 7636cf07d6043561d24202c8b231781b 465 Gene3D G3DSA:1.10.8.60 327 393 3.3E-22 T 12-10-2018 Amet_4533 7636cf07d6043561d24202c8b231781b 465 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 69 1.8E-6 T 12-10-2018 IPR000014 PAS domain Amet_4533 7636cf07d6043561d24202c8b231781b 465 SUPERFAMILY SSF55785 12 112 7.33E-11 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4533 7636cf07d6043561d24202c8b231781b 465 Gene3D G3DSA:3.40.50.300 141 326 1.5E-69 T 12-10-2018 Amet_4533 7636cf07d6043561d24202c8b231781b 465 SMART SM00091 17 83 7.5E-4 T 12-10-2018 IPR000014 PAS domain Amet_4533 7636cf07d6043561d24202c8b231781b 465 Pfam PF02954 Bacterial regulatory protein, Fis family 422 461 8.2E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4533 7636cf07d6043561d24202c8b231781b 465 SUPERFAMILY SSF52540 154 399 4.37E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4533 7636cf07d6043561d24202c8b231781b 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_4533 7636cf07d6043561d24202c8b231781b 465 SUPERFAMILY SSF46689 369 464 1.3E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4533 7636cf07d6043561d24202c8b231781b 465 SMART SM00382 175 319 4.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4533 7636cf07d6043561d24202c8b231781b 465 Pfam PF00158 Sigma-54 interaction domain 155 323 3.8E-70 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 6 463 1.8E-258 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 SMART SM00382 145 409 1.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 1.9E-66 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 Gene3D G3DSA:1.10.1140.10 349 464 1.7E-58 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 4 464 58.61 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 Gene3D G3DSA:3.40.50.300 79 348 9.3E-119 T 12-10-2018 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 PIRSF PIRSF039072 1 464 5.7E-262 T 12-10-2018 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 SUPERFAMILY SSF52540 80 352 1.13E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 SUPERFAMILY SSF47917 349 463 1.67E-53 T 12-10-2018 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 Gene3D G3DSA:2.40.10.170 1 78 7.0E-28 T 12-10-2018 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 SUPERFAMILY SSF50615 4 78 4.97E-24 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_0353 2cc840f763e6369d516c3a46d7cef8b7 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 76 1.7E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_3200 7275627865b763c0f75774f6b349f0f0 271 Pfam PF00795 Carbon-nitrogen hydrolase 5 255 1.4E-71 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Amet_3200 7275627865b763c0f75774f6b349f0f0 271 Gene3D G3DSA:3.60.110.10 1 271 8.9E-113 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amet_3200 7275627865b763c0f75774f6b349f0f0 271 SUPERFAMILY SSF56317 2 264 6.02E-87 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amet_3200 7275627865b763c0f75774f6b349f0f0 271 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Amet_4634 b16b4b626c238c7dab9057cf883d21d5 246 Gene3D G3DSA:3.30.70.580 1 106 6.6E-33 T 12-10-2018 Amet_4634 b16b4b626c238c7dab9057cf883d21d5 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 240 1.1E-58 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4634 b16b4b626c238c7dab9057cf883d21d5 246 PIRSF PIRSF001430 1 246 3.7E-73 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4634 b16b4b626c238c7dab9057cf883d21d5 246 Pfam PF01416 tRNA pseudouridine synthase 144 246 1.7E-25 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4634 b16b4b626c238c7dab9057cf883d21d5 246 Pfam PF01416 tRNA pseudouridine synthase 7 105 1.1E-8 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4634 b16b4b626c238c7dab9057cf883d21d5 246 Gene3D G3DSA:3.30.70.660 107 244 1.5E-44 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Amet_4634 b16b4b626c238c7dab9057cf883d21d5 246 SUPERFAMILY SSF55120 1 246 3.16E-74 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4634 b16b4b626c238c7dab9057cf883d21d5 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 33.106 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4570 e2a0c306abbde4540aff39d55727b559 162 Pfam PF01799 [2Fe-2S] binding domain 74 146 3.6E-31 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Amet_4570 e2a0c306abbde4540aff39d55727b559 162 Gene3D G3DSA:1.10.150.120 77 161 8.6E-34 T 12-10-2018 Amet_4570 e2a0c306abbde4540aff39d55727b559 162 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 57 6.1E-7 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amet_4570 e2a0c306abbde4540aff39d55727b559 162 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Amet_4570 e2a0c306abbde4540aff39d55727b559 162 SUPERFAMILY SSF54292 4 79 1.97E-24 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_4570 e2a0c306abbde4540aff39d55727b559 162 SUPERFAMILY SSF47741 85 154 8.11E-33 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Amet_4570 e2a0c306abbde4540aff39d55727b559 162 Gene3D G3DSA:3.10.20.30 1 76 5.3E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_2975 b9b3cb36ed1087a46825145be4bd2608 260 Gene3D G3DSA:3.30.2040.10 119 231 5.0E-94 T 12-10-2018 Amet_2975 b9b3cb36ed1087a46825145be4bd2608 260 Pfam PF07286 Protein of unknown function (DUF1445) 109 250 3.6E-66 T 12-10-2018 IPR009906 D-glutamate cyclase Amet_2975 b9b3cb36ed1087a46825145be4bd2608 260 Gene3D G3DSA:3.40.1640.10 20 247 5.0E-94 T 12-10-2018 Amet_2975 b9b3cb36ed1087a46825145be4bd2608 260 PIRSF PIRSF029755 1 260 6.4E-112 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 Amet_2975 b9b3cb36ed1087a46825145be4bd2608 260 Hamap MF_01830 Putative hydro-lyase . 5 259 51.285 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 Amet_2975 b9b3cb36ed1087a46825145be4bd2608 260 SUPERFAMILY SSF160920 6 252 5.1E-108 T 12-10-2018 IPR038021 Putative hydro-lyase Amet_4208 744932664ef704fc03165aadb3c76736 302 PIRSF PIRSF000164 1 302 3.3E-81 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Amet_4208 744932664ef704fc03165aadb3c76736 302 Gene3D G3DSA:3.20.20.70 14 293 4.0E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_4208 744932664ef704fc03165aadb3c76736 302 SUPERFAMILY SSF51395 3 301 1.06E-90 T 12-10-2018 Amet_4208 744932664ef704fc03165aadb3c76736 302 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 7 300 5.8E-118 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Amet_4208 744932664ef704fc03165aadb3c76736 302 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 240 260 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Amet_4208 744932664ef704fc03165aadb3c76736 302 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 6 302 42.38 T 12-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 Amet_4208 744932664ef704fc03165aadb3c76736 302 Gene3D G3DSA:2.30.26.10 57 217 4.0E-97 T 12-10-2018 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 Amet_4208 744932664ef704fc03165aadb3c76736 302 Pfam PF01180 Dihydroorotate dehydrogenase 6 285 3.8E-80 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Amet_4527 1d092b7a9417016bdc28128da923f1e7 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Amet_4527 1d092b7a9417016bdc28128da923f1e7 321 PIRSF PIRSF006621 1 321 1.4E-110 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Amet_4527 1d092b7a9417016bdc28128da923f1e7 321 SUPERFAMILY SSF51395 11 317 3.66E-94 T 12-10-2018 Amet_4527 1d092b7a9417016bdc28128da923f1e7 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 313 1.9E-102 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Amet_4527 1d092b7a9417016bdc28128da923f1e7 321 Gene3D G3DSA:1.10.1200.80 252 321 1.2E-22 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 Amet_4527 1d092b7a9417016bdc28128da923f1e7 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 1.0E-129 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Amet_4527 1d092b7a9417016bdc28128da923f1e7 321 Gene3D G3DSA:3.20.20.70 6 248 5.3E-90 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1946 dfd9149bc8446fcc2ebc6b95fe48bb01 104 SUPERFAMILY SSF46689 5 88 1.02E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1946 dfd9149bc8446fcc2ebc6b95fe48bb01 104 Gene3D G3DSA:1.10.10.60 52 102 2.5E-8 T 12-10-2018 Amet_1946 dfd9149bc8446fcc2ebc6b95fe48bb01 104 Pfam PF08765 Mor transcription activator family 19 96 9.5E-15 T 12-10-2018 IPR014875 Mor transcription activator Amet_4373 dfd9149bc8446fcc2ebc6b95fe48bb01 104 SUPERFAMILY SSF46689 5 88 1.02E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4373 dfd9149bc8446fcc2ebc6b95fe48bb01 104 Gene3D G3DSA:1.10.10.60 52 102 2.5E-8 T 12-10-2018 Amet_4373 dfd9149bc8446fcc2ebc6b95fe48bb01 104 Pfam PF08765 Mor transcription activator family 19 96 9.5E-15 T 12-10-2018 IPR014875 Mor transcription activator Amet_0409 dfd9149bc8446fcc2ebc6b95fe48bb01 104 SUPERFAMILY SSF46689 5 88 1.02E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0409 dfd9149bc8446fcc2ebc6b95fe48bb01 104 Gene3D G3DSA:1.10.10.60 52 102 2.5E-8 T 12-10-2018 Amet_0409 dfd9149bc8446fcc2ebc6b95fe48bb01 104 Pfam PF08765 Mor transcription activator family 19 96 9.5E-15 T 12-10-2018 IPR014875 Mor transcription activator Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 SUPERFAMILY SSF46785 8 77 1.88E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 8.3E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 SMART SM00345 14 73 9.3E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 SUPERFAMILY SSF48008 96 226 5.75E-21 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 Pfam PF07729 FCD domain 98 222 1.2E-22 T 12-10-2018 IPR011711 GntR, C-terminal Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 SMART SM00895 98 223 1.3E-17 T 12-10-2018 IPR011711 GntR, C-terminal Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 Gene3D G3DSA:1.20.120.530 94 231 5.7E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_0381 fc0b5600a879db49af6de54b5b1cd6ca 231 Gene3D G3DSA:1.10.10.10 2 79 3.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 Gene3D G3DSA:2.40.240.10 346 464 6.4E-82 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 553 1.5E-224 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 33 44 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 30 42 1.3E-9 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 55 1.3E-9 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 218 1.3E-9 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 PRINTS PR00987 Glutamyl-tRNA synthetase signature 59 72 1.3E-9 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 Gene3D G3DSA:2.40.240.10 338 550 6.4E-82 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 SUPERFAMILY SSF52374 27 344 3.18E-97 T 12-10-2018 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 Gene3D G3DSA:3.90.800.10 99 207 4.8E-103 T 12-10-2018 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 SUPERFAMILY SSF50715 338 551 2.14E-73 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 27 335 7.9E-108 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 338 532 1.6E-59 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 Gene3D G3DSA:3.40.50.620 27 245 4.8E-103 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 553 50.937 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 Amet_4254 94b7ba4ece748609f6728652d79b4f08 554 Gene3D G3DSA:1.10.1160.10 259 337 9.4E-34 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Amet_0375 fd1407a34c4304f37145fc274f792977 307 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 263 1.4E-124 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Amet_0375 fd1407a34c4304f37145fc274f792977 307 Pfam PF00483 Nucleotidyl transferase 5 265 3.4E-35 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amet_0375 fd1407a34c4304f37145fc274f792977 307 SUPERFAMILY SSF53448 1 274 6.04E-70 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_0375 fd1407a34c4304f37145fc274f792977 307 Gene3D G3DSA:3.90.550.10 1 292 1.8E-96 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_3386 1a5d0b3f4dbde64c586cf6d77c279b8d 441 Gene3D G3DSA:3.10.20.70 2 103 1.3E-37 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_3386 1a5d0b3f4dbde64c586cf6d77c279b8d 441 SMART SM01230 102 351 1.4E-133 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_3386 1a5d0b3f4dbde64c586cf6d77c279b8d 441 Gene3D G3DSA:3.30.590.10 105 441 1.0E-131 T 12-10-2018 Amet_3386 1a5d0b3f4dbde64c586cf6d77c279b8d 441 SUPERFAMILY SSF55931 103 438 9.81E-123 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amet_3386 1a5d0b3f4dbde64c586cf6d77c279b8d 441 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 438 8.3E-166 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_3386 1a5d0b3f4dbde64c586cf6d77c279b8d 441 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 95 2.2E-31 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amet_3386 1a5d0b3f4dbde64c586cf6d77c279b8d 441 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amet_3386 1a5d0b3f4dbde64c586cf6d77c279b8d 441 SUPERFAMILY SSF54368 5 101 1.57E-31 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_3386 1a5d0b3f4dbde64c586cf6d77c279b8d 441 Pfam PF00120 Glutamine synthetase, catalytic domain 103 437 5.6E-132 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_4477 83db1d7926573d3d231245429b21d71e 207 Pfam PF00573 Ribosomal protein L4/L1 family 18 204 3.5E-75 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Amet_4477 83db1d7926573d3d231245429b21d71e 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 36.943 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4477 83db1d7926573d3d231245429b21d71e 207 SUPERFAMILY SSF52166 1 206 3.66E-84 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Amet_4477 83db1d7926573d3d231245429b21d71e 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 6.9E-82 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4477 83db1d7926573d3d231245429b21d71e 207 Gene3D G3DSA:3.40.1370.10 2 207 2.6E-84 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Amet_3920 8a5305448a21510de235db207df47328 308 Gene3D G3DSA:3.40.50.1820 23 308 2.3E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_3920 8a5305448a21510de235db207df47328 308 SUPERFAMILY SSF53474 30 308 9.67E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_3920 8a5305448a21510de235db207df47328 308 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 94 307 6.2E-40 T 12-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal Amet_3920 8a5305448a21510de235db207df47328 308 PIRSF PIRSF016521 3 308 8.0E-67 T 12-10-2018 IPR016662 Acyl-CoA thioesterase, long chain GO:0006637|GO:0016790 Amet_0989 65135bbd1eafadb3e4459d0d7c13c1d2 238 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 36 227 23.127 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Amet_0989 65135bbd1eafadb3e4459d0d7c13c1d2 238 SUPERFAMILY SSF53448 38 224 5.42E-31 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_0989 65135bbd1eafadb3e4459d0d7c13c1d2 238 Gene3D G3DSA:3.90.550.10 28 230 1.0E-51 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_0989 65135bbd1eafadb3e4459d0d7c13c1d2 238 Pfam PF12804 MobA-like NTP transferase domain 40 189 1.6E-32 T 12-10-2018 IPR025877 MobA-like NTP transferase Amet_4004 1b0193921dba212bc23379f629de2bf7 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 61 7.3E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_4004 1b0193921dba212bc23379f629de2bf7 74 Gene3D G3DSA:1.10.260.40 4 74 2.6E-6 T 12-10-2018 Amet_4004 1b0193921dba212bc23379f629de2bf7 74 SMART SM00530 6 60 7.4E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_4004 1b0193921dba212bc23379f629de2bf7 74 SUPERFAMILY SSF47413 1 62 1.32E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_1497 52acfbc1f1f8adbf5392a8fb4de6052b 155 SUPERFAMILY SSF52833 1 153 5.96E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_1497 52acfbc1f1f8adbf5392a8fb4de6052b 155 Gene3D G3DSA:3.40.30.10 1 151 4.5E-39 T 12-10-2018 Amet_1497 52acfbc1f1f8adbf5392a8fb4de6052b 155 PIRSF PIRSF000239 1 155 2.4E-25 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amet_1497 52acfbc1f1f8adbf5392a8fb4de6052b 155 Pfam PF00578 AhpC/TSA family 6 131 2.9E-31 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 SUPERFAMILY SSF158472 191 240 4.32E-9 T 12-10-2018 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 463 1.5E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 SMART SM00387 355 463 2.9E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 SUPERFAMILY SSF55874 300 463 2.23E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 SMART SM00304 191 243 1.7E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 Gene3D G3DSA:1.10.287.130 240 310 2.6E-20 T 12-10-2018 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 308 4.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 SUPERFAMILY SSF47384 227 308 3.92E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 Gene3D G3DSA:1.10.8.500 190 239 7.7E-7 T 12-10-2018 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 Pfam PF00672 HAMP domain 192 239 8.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 2.9E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 2.9E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 2.9E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 SMART SM00388 244 310 2.1E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_0547 9561a4d665f2ecf95ba6fb0030494004 463 Gene3D G3DSA:3.30.565.10 317 463 7.3E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 SUPERFAMILY SSF54106 13 58 7.59E-10 T 12-10-2018 Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 SUPERFAMILY SSF54106 125 171 5.1E-12 T 12-10-2018 Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 Gene3D G3DSA:3.10.350.10 125 170 2.1E-22 T 12-10-2018 IPR036779 LysM domain superfamily Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 Gene3D G3DSA:3.10.350.10 11 57 8.9E-19 T 12-10-2018 IPR036779 LysM domain superfamily Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 SUPERFAMILY SSF54106 183 229 6.28E-12 T 12-10-2018 Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 SUPERFAMILY SSF54106 70 114 4.32E-11 T 12-10-2018 Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 Pfam PF01476 LysM domain 14 57 5.0E-12 T 12-10-2018 IPR018392 LysM domain Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 Pfam PF01476 LysM domain 185 229 9.9E-14 T 12-10-2018 IPR018392 LysM domain Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 Pfam PF01476 LysM domain 71 114 6.6E-12 T 12-10-2018 IPR018392 LysM domain Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 Pfam PF01476 LysM domain 127 170 1.1E-12 T 12-10-2018 IPR018392 LysM domain Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 Gene3D G3DSA:3.10.350.10 59 123 2.0E-19 T 12-10-2018 IPR036779 LysM domain superfamily Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 Gene3D G3DSA:3.10.350.10 173 231 6.2E-19 T 12-10-2018 IPR036779 LysM domain superfamily Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 SMART SM00257 70 114 1.7E-15 T 12-10-2018 IPR018392 LysM domain Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 SMART SM00257 126 170 1.6E-17 T 12-10-2018 IPR018392 LysM domain Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 SMART SM00257 13 57 2.6E-13 T 12-10-2018 IPR018392 LysM domain Amet_2825 94ef8b230924b2264896054da4ffb6a2 232 SMART SM00257 184 229 4.3E-14 T 12-10-2018 IPR018392 LysM domain Amet_4429 f67aad6c5f74bba485b217a018c72aa3 356 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 246 340 1.2E-21 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Amet_4429 f67aad6c5f74bba485b217a018c72aa3 356 SUPERFAMILY SSF52922 238 346 9.11E-22 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_4429 f67aad6c5f74bba485b217a018c72aa3 356 Gene3D G3DSA:3.40.50.970 1 192 9.9E-66 T 12-10-2018 Amet_4429 f67aad6c5f74bba485b217a018c72aa3 356 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 192 7.5E-52 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amet_4429 f67aad6c5f74bba485b217a018c72aa3 356 SUPERFAMILY SSF52518 1 234 1.31E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_4429 f67aad6c5f74bba485b217a018c72aa3 356 Gene3D G3DSA:3.40.50.920 234 349 2.5E-20 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 SUPERFAMILY SSF53187 524 817 3.59E-34 T 12-10-2018 Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 SUPERFAMILY SSF53187 93 392 3.41E-55 T 12-10-2018 Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 Gene3D G3DSA:3.40.630.10 88 404 8.1E-62 T 12-10-2018 Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 Pfam PF00246 Zinc carboxypeptidase 550 701 5.2E-9 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 Pfam PF00395 S-layer homology domain 1505 1545 1.0E-14 T 12-10-2018 IPR001119 S-layer homology domain Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 Pfam PF00395 S-layer homology domain 1566 1606 2.1E-10 T 12-10-2018 IPR001119 S-layer homology domain Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 Pfam PF00395 S-layer homology domain 1447 1488 1.5E-14 T 12-10-2018 IPR001119 S-layer homology domain Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 Gene3D G3DSA:2.60.220.30 1295 1432 7.6E-8 T 12-10-2018 Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 Gene3D G3DSA:3.40.630.10 522 811 5.7E-26 T 12-10-2018 Amet_3539 77b7fd6870a8228b06c9ad6c7c6c55c3 1615 Pfam PF04389 Peptidase family M28 152 375 6.3E-34 T 12-10-2018 IPR007484 Peptidase M28 Amet_3617 2c1db0a76e0f304d779fcdf68140e8dc 418 Pfam PF00005 ABC transporter 21 169 2.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3617 2c1db0a76e0f304d779fcdf68140e8dc 418 SUPERFAMILY SSF52540 4 230 4.92E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3617 2c1db0a76e0f304d779fcdf68140e8dc 418 ProDom PD064925 ATP-BINDING ABC NUCLEOTIDE-BINDING MEMBRANE TRANSPORTER IRON TRANSPORTER COMPOUND ATPASE III 299 375 1.0E-38 T 12-10-2018 IPR020322 Uncharacterised domain MJ0874 Amet_3617 2c1db0a76e0f304d779fcdf68140e8dc 418 SMART SM00382 29 217 1.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3617 2c1db0a76e0f304d779fcdf68140e8dc 418 Gene3D G3DSA:3.40.50.300 4 254 1.4E-68 T 12-10-2018 Amet_3617 2c1db0a76e0f304d779fcdf68140e8dc 418 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0252 9c4130382f7f9962adf910c159e6ac5c 189 Pfam PF00072 Response regulator receiver domain 5 113 2.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0252 9c4130382f7f9962adf910c159e6ac5c 189 PIRSF PIRSF036382 1 189 7.4E-73 T 12-10-2018 IPR008327 Signal transduction response regulator, antiterminator Amet_0252 9c4130382f7f9962adf910c159e6ac5c 189 SMART SM01012 131 186 2.0E-20 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 Amet_0252 9c4130382f7f9962adf910c159e6ac5c 189 SMART SM00448 3 115 8.4E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0252 9c4130382f7f9962adf910c159e6ac5c 189 SUPERFAMILY SSF52172 2 185 3.27E-53 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0252 9c4130382f7f9962adf910c159e6ac5c 189 Gene3D G3DSA:1.10.10.10 134 189 3.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0252 9c4130382f7f9962adf910c159e6ac5c 189 Gene3D G3DSA:3.40.50.2300 1 132 1.4E-33 T 12-10-2018 Amet_0252 9c4130382f7f9962adf910c159e6ac5c 189 Pfam PF03861 ANTAR domain 135 183 2.0E-17 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 Amet_2466 c1dac08e140b3c4a7f02a5e8056255da 144 Gene3D G3DSA:3.30.1490.190 92 144 2.4E-17 T 12-10-2018 Amet_2466 c1dac08e140b3c4a7f02a5e8056255da 144 Pfam PF01475 Ferric uptake regulator family 14 136 3.3E-36 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Amet_2466 c1dac08e140b3c4a7f02a5e8056255da 144 Gene3D G3DSA:1.10.10.10 1 88 1.7E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2466 c1dac08e140b3c4a7f02a5e8056255da 144 SUPERFAMILY SSF46785 7 141 2.88E-40 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1802 f0626546d6809b929a1829087e5953b0 187 Pfam PF04542 Sigma-70 region 2 19 84 9.8E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1802 f0626546d6809b929a1829087e5953b0 187 SUPERFAMILY SSF88946 14 98 9.42E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1802 f0626546d6809b929a1829087e5953b0 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 175 3.2E-29 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_1802 f0626546d6809b929a1829087e5953b0 187 Pfam PF08281 Sigma-70, region 4 121 171 2.9E-15 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_1802 f0626546d6809b929a1829087e5953b0 187 SUPERFAMILY SSF88659 110 175 5.98E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_1802 f0626546d6809b929a1829087e5953b0 187 Gene3D G3DSA:1.10.10.10 107 177 1.8E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1802 f0626546d6809b929a1829087e5953b0 187 Gene3D G3DSA:1.10.1740.10 2 106 6.1E-20 T 12-10-2018 Amet_0092 88814af89a4b37bebffca3c7d64f8fbe 79 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 7.7E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_0092 88814af89a4b37bebffca3c7d64f8fbe 79 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 1.6E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_0092 88814af89a4b37bebffca3c7d64f8fbe 79 Gene3D G3DSA:2.10.260.10 1 51 2.5E-24 T 12-10-2018 Amet_0092 88814af89a4b37bebffca3c7d64f8fbe 79 SUPERFAMILY SSF89447 2 53 2.62E-15 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Amet_0092 88814af89a4b37bebffca3c7d64f8fbe 79 SMART SM00966 8 51 2.1E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_2277 9b23e7fa63f57df2619a246ee5939c75 114 Pfam PF07085 DRTGG domain 6 109 1.9E-8 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Amet_2277 9b23e7fa63f57df2619a246ee5939c75 114 Gene3D G3DSA:3.40.1390.20 1 114 4.7E-7 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Amet_2277 9b23e7fa63f57df2619a246ee5939c75 114 SUPERFAMILY SSF75138 3 109 2.75E-19 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Amet_2451 bdcd9f8a2f306c551aa1f1fd32eb36cd 278 SUPERFAMILY SSF51735 2 275 3.25E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2451 bdcd9f8a2f306c551aa1f1fd32eb36cd 278 Pfam PF04321 RmlD substrate binding domain 2 275 5.9E-66 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Amet_2451 bdcd9f8a2f306c551aa1f1fd32eb36cd 278 Gene3D G3DSA:3.40.50.720 2 265 2.1E-75 T 12-10-2018 Amet_2451 bdcd9f8a2f306c551aa1f1fd32eb36cd 278 Gene3D G3DSA:3.90.25.10 160 271 2.1E-75 T 12-10-2018 Amet_1780 cc571042cf2d26182ca8cd0d5c82fcab 76 Pfam PF00106 short chain dehydrogenase 4 75 9.5E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_1780 cc571042cf2d26182ca8cd0d5c82fcab 76 Gene3D G3DSA:3.40.50.720 1 76 2.8E-20 T 12-10-2018 Amet_1780 cc571042cf2d26182ca8cd0d5c82fcab 76 SUPERFAMILY SSF51735 1 75 2.26E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2915 595de7636f4bf1b537b081e8f2099179 566 PIRSF PIRSF002741 1 562 4.3E-116 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_2915 595de7636f4bf1b537b081e8f2099179 566 Gene3D G3DSA:3.10.105.10 308 532 5.8E-132 T 12-10-2018 Amet_2915 595de7636f4bf1b537b081e8f2099179 566 Gene3D G3DSA:3.40.190.10 60 547 5.8E-132 T 12-10-2018 Amet_2915 595de7636f4bf1b537b081e8f2099179 566 SUPERFAMILY SSF53850 45 554 3.8E-116 T 12-10-2018 Amet_2915 595de7636f4bf1b537b081e8f2099179 566 Gene3D G3DSA:3.90.76.10 79 214 5.8E-132 T 12-10-2018 Amet_2915 595de7636f4bf1b537b081e8f2099179 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 95 475 4.5E-80 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_0545 d365f0986bd1c68220443495e039d868 465 PIRSF PIRSF006603 6 460 1.1E-75 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_0545 d365f0986bd1c68220443495e039d868 465 Pfam PF01554 MatE 31 187 9.5E-24 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_0545 d365f0986bd1c68220443495e039d868 465 Pfam PF01554 MatE 252 414 1.7E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_0545 d365f0986bd1c68220443495e039d868 465 TIGRFAM TIGR00797 matE: MATE efflux family protein 31 425 3.2E-45 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3546 273a72756e2e8801fbc237e5016648cd 368 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 8 345 1.3E-152 T 12-10-2018 IPR026366 Putative selenium metabolism protein, YedE family Amet_3546 273a72756e2e8801fbc237e5016648cd 368 Pfam PF04143 Sulphur transport 207 315 2.2E-6 T 12-10-2018 IPR007272 Sulphur transport domain Amet_2945 103fef0a42b44ff3b0cef52f18675e7b 827 Gene3D G3DSA:3.40.50.2000 479 811 0.0 T 12-10-2018 Amet_2945 103fef0a42b44ff3b0cef52f18675e7b 827 PIRSF PIRSF000460 4 827 1.7E-230 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amet_2945 103fef0a42b44ff3b0cef52f18675e7b 827 Gene3D G3DSA:3.40.50.2000 29 818 0.0 T 12-10-2018 Amet_2945 103fef0a42b44ff3b0cef52f18675e7b 827 Pfam PF00343 Carbohydrate phosphorylase 105 818 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amet_2945 103fef0a42b44ff3b0cef52f18675e7b 827 SUPERFAMILY SSF53756 15 823 0.0 T 12-10-2018 Amet_2945 103fef0a42b44ff3b0cef52f18675e7b 827 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 657 669 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amet_2945 103fef0a42b44ff3b0cef52f18675e7b 827 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 17 818 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amet_0484 6508280d718ef752b8b411969b442488 397 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0484 6508280d718ef752b8b411969b442488 397 Pfam PF00549 CoA-ligase 262 381 2.3E-22 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0484 6508280d718ef752b8b411969b442488 397 Gene3D G3DSA:3.30.470.20 1 234 2.4E-92 T 12-10-2018 Amet_0484 6508280d718ef752b8b411969b442488 397 SUPERFAMILY SSF52210 239 386 7.98E-49 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0484 6508280d718ef752b8b411969b442488 397 Pfam PF08442 ATP-grasp domain 2 202 4.4E-78 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amet_0484 6508280d718ef752b8b411969b442488 397 PIRSF PIRSF001554 1 388 2.0E-148 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amet_0484 6508280d718ef752b8b411969b442488 397 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.925 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amet_0484 6508280d718ef752b8b411969b442488 397 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.3E-153 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amet_0484 6508280d718ef752b8b411969b442488 397 Gene3D G3DSA:3.30.1490.20 21 104 2.4E-92 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_0484 6508280d718ef752b8b411969b442488 397 Gene3D G3DSA:3.40.50.261 240 388 6.2E-53 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0484 6508280d718ef752b8b411969b442488 397 SUPERFAMILY SSF56059 1 238 1.24E-79 T 12-10-2018 Amet_1507 ce825f163eb8881459842a89e300375d 524 SUPERFAMILY SSF158472 243 292 8.37E-8 T 12-10-2018 Amet_1507 ce825f163eb8881459842a89e300375d 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 518 1.6E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1507 ce825f163eb8881459842a89e300375d 524 SUPERFAMILY SSF55874 352 521 1.44E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1507 ce825f163eb8881459842a89e300375d 524 SMART SM00304 241 294 6.7E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1507 ce825f163eb8881459842a89e300375d 524 SUPERFAMILY SSF47384 278 361 2.55E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1507 ce825f163eb8881459842a89e300375d 524 Gene3D G3DSA:1.10.287.130 245 364 7.9E-32 T 12-10-2018 Amet_1507 ce825f163eb8881459842a89e300375d 524 Gene3D G3DSA:3.30.565.10 369 521 1.7E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1507 ce825f163eb8881459842a89e300375d 524 Pfam PF00672 HAMP domain 243 291 1.5E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1507 ce825f163eb8881459842a89e300375d 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 6.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1507 ce825f163eb8881459842a89e300375d 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 6.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1507 ce825f163eb8881459842a89e300375d 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 6.4E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1507 ce825f163eb8881459842a89e300375d 524 SMART SM00388 295 362 6.6E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1507 ce825f163eb8881459842a89e300375d 524 SMART SM00387 405 520 2.1E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1507 ce825f163eb8881459842a89e300375d 524 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 360 2.2E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3975 28f6ae51789ef7900281651aefe063e9 985 Gene3D G3DSA:3.40.50.300 727 965 2.9E-12 T 12-10-2018 Amet_3975 28f6ae51789ef7900281651aefe063e9 985 SUPERFAMILY SSF52540 1 959 2.33E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3975 28f6ae51789ef7900281651aefe063e9 985 Pfam PF13476 AAA domain 8 304 4.5E-6 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain Amet_3975 28f6ae51789ef7900281651aefe063e9 985 Gene3D G3DSA:3.40.50.300 1 172 2.6E-18 T 12-10-2018 Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 Gene3D G3DSA:3.40.50.150 143 443 3.9E-95 T 12-10-2018 Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 444 3.0E-129 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 323 335 1.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 373 389 1.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 426 443 1.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 1.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 1.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 SUPERFAMILY SSF53335 141 444 3.65E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 181 443 1.6E-68 T 12-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 Pfam PF01189 16S rRNA methyltransferase RsmB/F 246 441 1.2E-64 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 SUPERFAMILY SSF48013 2 153 1.7E-35 T 12-10-2018 IPR035926 NusB-like superfamily Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 154 241 1.4E-8 T 12-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 Gene3D G3DSA:1.10.940.10 1 142 1.8E-36 T 12-10-2018 IPR035926 NusB-like superfamily Amet_2782 553458b8c05312eaa0acc8eef9d12aef 444 Pfam PF01029 NusB family 2 125 2.9E-33 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Amet_3153 ecb86a1b0442014b4d1b771adab2fb58 126 Pfam PF04519 Polymer-forming cytoskeletal 15 111 3.5E-25 T 12-10-2018 IPR007607 Bactofilin A/B Amet_4760 dd822d7cb5c89e0182446c2a79281779 430 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 330 340 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amet_4760 dd822d7cb5c89e0182446c2a79281779 430 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 114 124 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Amet_4760 dd822d7cb5c89e0182446c2a79281779 430 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 153 163 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Amet_4760 dd822d7cb5c89e0182446c2a79281779 430 Pfam PF00082 Subtilase family 109 378 1.2E-54 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amet_4760 dd822d7cb5c89e0182446c2a79281779 430 Gene3D G3DSA:3.40.50.200 84 388 6.6E-100 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amet_4760 dd822d7cb5c89e0182446c2a79281779 430 PRINTS PR00723 Subtilisin serine protease family (S8) signature 329 345 5.5E-19 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Amet_4760 dd822d7cb5c89e0182446c2a79281779 430 PRINTS PR00723 Subtilisin serine protease family (S8) signature 149 162 5.5E-19 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Amet_4760 dd822d7cb5c89e0182446c2a79281779 430 PRINTS PR00723 Subtilisin serine protease family (S8) signature 109 128 5.5E-19 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related Amet_4760 dd822d7cb5c89e0182446c2a79281779 430 SUPERFAMILY SSF52743 97 387 4.58E-83 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amet_2777 13d8f94f6f99bf08e47b5e2396392b1e 220 PIRSF PIRSF001461 1 220 7.7E-102 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Amet_2777 13d8f94f6f99bf08e47b5e2396392b1e 220 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 213 9.3E-95 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Amet_2777 13d8f94f6f99bf08e47b5e2396392b1e 220 SUPERFAMILY SSF51366 2 214 1.35E-79 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amet_2777 13d8f94f6f99bf08e47b5e2396392b1e 220 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Amet_2777 13d8f94f6f99bf08e47b5e2396392b1e 220 Gene3D G3DSA:3.20.20.70 1 218 1.8E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2777 13d8f94f6f99bf08e47b5e2396392b1e 220 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 200 9.2E-89 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 SUPERFAMILY SSF52540 152 385 2.92E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 Gene3D G3DSA:3.40.50.300 126 313 1.8E-59 T 12-10-2018 Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 Pfam PF00989 PAS fold 10 63 4.0E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 SMART SM00091 5 71 2.0E-6 T 12-10-2018 IPR000014 PAS domain Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 114 2.7E-6 T 12-10-2018 IPR000014 PAS domain Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 Gene3D G3DSA:3.30.450.20 8 109 2.1E-14 T 12-10-2018 Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 Gene3D G3DSA:1.10.10.60 404 446 1.6E-8 T 12-10-2018 Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 SMART SM00382 161 305 3.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 Gene3D G3DSA:1.10.8.60 314 391 3.9E-23 T 12-10-2018 Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 1.8E-4 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 SUPERFAMILY SSF46689 394 446 1.48E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 SUPERFAMILY SSF55785 8 100 3.32E-13 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4245 ba310e1de7479b13532d8cd77e77dd98 446 Pfam PF00158 Sigma-54 interaction domain 144 308 3.4E-64 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_1746 f6188c6c308a858090bf2a77444e5f9f 83 SUPERFAMILY SSF46785 2 66 5.82E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1746 f6188c6c308a858090bf2a77444e5f9f 83 Pfam PF01726 LexA DNA binding domain 5 61 3.8E-17 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Amet_1746 f6188c6c308a858090bf2a77444e5f9f 83 Gene3D G3DSA:1.10.10.10 1 66 7.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2530 7547f8419e959f9c73353803177de9f2 206 Pfam PF02163 Peptidase family M50 117 156 6.8E-7 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Amet_0728 794be095bbdad25511d9444f2dfeca2f 318 Pfam PF00700 Bacterial flagellin C-terminal helical region 236 317 1.2E-5 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amet_0728 794be095bbdad25511d9444f2dfeca2f 318 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 197 8.8E-53 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Amet_0728 794be095bbdad25511d9444f2dfeca2f 318 Gene3D G3DSA:1.20.1330.10 40 263 5.4E-50 T 12-10-2018 Amet_0728 794be095bbdad25511d9444f2dfeca2f 318 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.1E-27 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amet_0728 794be095bbdad25511d9444f2dfeca2f 318 SUPERFAMILY SSF64518 1 318 1.12E-70 T 12-10-2018 Amet_1063 77e1a6973e0b56f1376354aa2c419cd6 589 SUPERFAMILY SSF55486 50 588 7.45E-92 T 12-10-2018 Amet_1063 77e1a6973e0b56f1376354aa2c419cd6 589 Pfam PF08439 Oligopeptidase F 115 173 8.9E-9 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Amet_1063 77e1a6973e0b56f1376354aa2c419cd6 589 Gene3D G3DSA:1.20.140.70 15 170 1.3E-10 T 12-10-2018 Amet_1063 77e1a6973e0b56f1376354aa2c419cd6 589 Pfam PF01432 Peptidase family M3 195 575 2.7E-26 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Amet_1063 77e1a6973e0b56f1376354aa2c419cd6 589 Gene3D G3DSA:1.10.1370.20 219 589 2.1E-119 T 12-10-2018 Amet_1063 77e1a6973e0b56f1376354aa2c419cd6 589 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 587 1.0E-193 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 Amet_2207 6943fa511b5ebc891ee35fca1043fc2c 159 Gene3D G3DSA:3.30.70.640 1 159 4.1E-66 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_2207 6943fa511b5ebc891ee35fca1043fc2c 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.942 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_2207 6943fa511b5ebc891ee35fca1043fc2c 159 Pfam PF01967 MoaC family 15 150 5.0E-53 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_2207 6943fa511b5ebc891ee35fca1043fc2c 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 7.4E-61 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_2207 6943fa511b5ebc891ee35fca1043fc2c 159 SUPERFAMILY SSF55040 11 155 6.8E-59 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_1333 809f00baf5ff14e5fcaaaddc701df83c 222 Pfam PF05013 N-formylglutamate amidohydrolase 94 188 3.5E-7 T 12-10-2018 IPR007709 N-formylglutamate amidohydrolase Amet_1333 809f00baf5ff14e5fcaaaddc701df83c 222 SUPERFAMILY SSF53187 29 189 5.65E-6 T 12-10-2018 Amet_1333 809f00baf5ff14e5fcaaaddc701df83c 222 Gene3D G3DSA:3.40.630.40 90 222 4.3E-7 T 12-10-2018 Amet_3152 8759bdfb90a49e8be62f8ff1c8af0fdc 307 Gene3D G3DSA:2.70.70.10 148 307 1.3E-50 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_3152 8759bdfb90a49e8be62f8ff1c8af0fdc 307 SUPERFAMILY SSF51261 179 305 5.23E-56 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_3152 8759bdfb90a49e8be62f8ff1c8af0fdc 307 Pfam PF01551 Peptidase family M23 208 302 5.8E-35 T 12-10-2018 IPR016047 Peptidase M23 Amet_1268 489d337356a929eaf94a0717e480b08d 572 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 118 128 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_1268 489d337356a929eaf94a0717e480b08d 572 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 470 481 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_1268 489d337356a929eaf94a0717e480b08d 572 SUPERFAMILY SSF52016 384 571 6.36E-50 T 12-10-2018 Amet_1268 489d337356a929eaf94a0717e480b08d 572 SUPERFAMILY SSF143975 9 381 1.57E-117 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_1268 489d337356a929eaf94a0717e480b08d 572 Pfam PF00920 Dehydratase family 30 568 1.6E-178 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_1268 489d337356a929eaf94a0717e480b08d 572 Gene3D G3DSA:3.50.30.80 382 530 3.3E-47 T 12-10-2018 Amet_2344 f27808ba6501bc511892dfc113e74db4 134 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 22 133 2.9E-26 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane Amet_2344 f27808ba6501bc511892dfc113e74db4 134 Pfam PF12670 Protein of unknown function (DUF3792) 19 130 1.3E-21 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane Amet_1246 63e434a248616febee846e41e6643f80 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1246 63e434a248616febee846e41e6643f80 624 Pfam PF01609 Transposase DDE domain 262 549 9.5E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_4401 63e434a248616febee846e41e6643f80 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_4401 63e434a248616febee846e41e6643f80 624 Pfam PF01609 Transposase DDE domain 262 549 9.5E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_3040 63e434a248616febee846e41e6643f80 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_3040 63e434a248616febee846e41e6643f80 624 Pfam PF01609 Transposase DDE domain 262 549 9.5E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_0449 63e434a248616febee846e41e6643f80 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_0449 63e434a248616febee846e41e6643f80 624 Pfam PF01609 Transposase DDE domain 262 549 9.5E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_1109 63e434a248616febee846e41e6643f80 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1109 63e434a248616febee846e41e6643f80 624 Pfam PF01609 Transposase DDE domain 262 549 9.5E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_3819 63e434a248616febee846e41e6643f80 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_3819 63e434a248616febee846e41e6643f80 624 Pfam PF01609 Transposase DDE domain 262 549 9.5E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_1217 8f4d9b14f2a6a52f5c196d0bfe254d7b 239 Gene3D G3DSA:3.40.50.1000 1 215 1.1E-25 T 12-10-2018 IPR023214 HAD superfamily Amet_1217 8f4d9b14f2a6a52f5c196d0bfe254d7b 239 SUPERFAMILY SSF56784 1 212 2.76E-26 T 12-10-2018 IPR036412 HAD-like superfamily Amet_1217 8f4d9b14f2a6a52f5c196d0bfe254d7b 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 202 3.2E-15 T 12-10-2018 Amet_1217 8f4d9b14f2a6a52f5c196d0bfe254d7b 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 193 206 1.2E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_1217 8f4d9b14f2a6a52f5c196d0bfe254d7b 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 164 1.2E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_1217 8f4d9b14f2a6a52f5c196d0bfe254d7b 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.2E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_1217 8f4d9b14f2a6a52f5c196d0bfe254d7b 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 1.2E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_4779 7e547968d28d96e32c1eacec77b4ea87 199 Gene3D G3DSA:1.10.8.420 1 54 1.3E-22 T 12-10-2018 Amet_4779 7e547968d28d96e32c1eacec77b4ea87 199 TIGRFAM TIGR00615 recR: recombination protein RecR 4 197 6.8E-87 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Amet_4779 7e547968d28d96e32c1eacec77b4ea87 199 Pfam PF13662 Toprim domain 81 172 9.4E-26 T 12-10-2018 IPR006171 TOPRIM domain Amet_4779 7e547968d28d96e32c1eacec77b4ea87 199 Gene3D G3DSA:3.30.60.80 55 77 4.1E-9 T 12-10-2018 Amet_4779 7e547968d28d96e32c1eacec77b4ea87 199 SMART SM00493 81 166 1.2E-13 T 12-10-2018 IPR006171 TOPRIM domain Amet_4779 7e547968d28d96e32c1eacec77b4ea87 199 SUPERFAMILY SSF111304 4 199 2.22E-77 T 12-10-2018 IPR023627 Recombination protein RecR Amet_4779 7e547968d28d96e32c1eacec77b4ea87 199 Gene3D G3DSA:3.40.1360.10 78 199 3.6E-48 T 12-10-2018 Amet_4779 7e547968d28d96e32c1eacec77b4ea87 199 Pfam PF02132 RecR protein 40 78 8.6E-16 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Amet_4779 7e547968d28d96e32c1eacec77b4ea87 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 108.844 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Amet_0573 aeb64fe2f9d8da471571d6dbf6c7ca1b 363 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 209 218 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Amet_0573 aeb64fe2f9d8da471571d6dbf6c7ca1b 363 SUPERFAMILY SSF53383 15 348 3.59E-69 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_0573 aeb64fe2f9d8da471571d6dbf6c7ca1b 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 350 50.277 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Amet_0573 aeb64fe2f9d8da471571d6dbf6c7ca1b 363 Gene3D G3DSA:3.40.640.10 46 259 1.3E-107 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0573 aeb64fe2f9d8da471571d6dbf6c7ca1b 363 Gene3D G3DSA:3.90.1150.10 11 345 1.3E-107 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0573 aeb64fe2f9d8da471571d6dbf6c7ca1b 363 Pfam PF00155 Aminotransferase class I and II 25 346 2.7E-49 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_0573 aeb64fe2f9d8da471571d6dbf6c7ca1b 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 347 1.6E-100 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Amet_0383 426b1c33f5b8817fe38e6c9184a8a6d0 254 Pfam PF01381 Helix-turn-helix 120 163 9.6E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0383 426b1c33f5b8817fe38e6c9184a8a6d0 254 SUPERFAMILY SSF47413 3 71 4.56E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0383 426b1c33f5b8817fe38e6c9184a8a6d0 254 Gene3D G3DSA:1.10.260.40 5 72 6.9E-15 T 12-10-2018 Amet_0383 426b1c33f5b8817fe38e6c9184a8a6d0 254 Pfam PF12844 Helix-turn-helix domain 9 71 2.6E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0383 426b1c33f5b8817fe38e6c9184a8a6d0 254 SMART SM00530 116 171 1.3E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0383 426b1c33f5b8817fe38e6c9184a8a6d0 254 SMART SM00530 11 66 2.6E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0383 426b1c33f5b8817fe38e6c9184a8a6d0 254 Gene3D G3DSA:1.10.260.40 113 230 4.7E-12 T 12-10-2018 Amet_0383 426b1c33f5b8817fe38e6c9184a8a6d0 254 SUPERFAMILY SSF47413 110 177 4.86E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_4400 426b1c33f5b8817fe38e6c9184a8a6d0 254 Pfam PF01381 Helix-turn-helix 120 163 9.6E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_4400 426b1c33f5b8817fe38e6c9184a8a6d0 254 SUPERFAMILY SSF47413 3 71 4.56E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_4400 426b1c33f5b8817fe38e6c9184a8a6d0 254 Gene3D G3DSA:1.10.260.40 5 72 6.9E-15 T 12-10-2018 Amet_4400 426b1c33f5b8817fe38e6c9184a8a6d0 254 Pfam PF12844 Helix-turn-helix domain 9 71 2.6E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_4400 426b1c33f5b8817fe38e6c9184a8a6d0 254 SMART SM00530 116 171 1.3E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_4400 426b1c33f5b8817fe38e6c9184a8a6d0 254 SMART SM00530 11 66 2.6E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_4400 426b1c33f5b8817fe38e6c9184a8a6d0 254 Gene3D G3DSA:1.10.260.40 113 230 4.7E-12 T 12-10-2018 Amet_4400 426b1c33f5b8817fe38e6c9184a8a6d0 254 SUPERFAMILY SSF47413 110 177 4.86E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_1921 426b1c33f5b8817fe38e6c9184a8a6d0 254 Pfam PF01381 Helix-turn-helix 120 163 9.6E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1921 426b1c33f5b8817fe38e6c9184a8a6d0 254 SUPERFAMILY SSF47413 3 71 4.56E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_1921 426b1c33f5b8817fe38e6c9184a8a6d0 254 Gene3D G3DSA:1.10.260.40 5 72 6.9E-15 T 12-10-2018 Amet_1921 426b1c33f5b8817fe38e6c9184a8a6d0 254 Pfam PF12844 Helix-turn-helix domain 9 71 2.6E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1921 426b1c33f5b8817fe38e6c9184a8a6d0 254 SMART SM00530 116 171 1.3E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1921 426b1c33f5b8817fe38e6c9184a8a6d0 254 SMART SM00530 11 66 2.6E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1921 426b1c33f5b8817fe38e6c9184a8a6d0 254 Gene3D G3DSA:1.10.260.40 113 230 4.7E-12 T 12-10-2018 Amet_1921 426b1c33f5b8817fe38e6c9184a8a6d0 254 SUPERFAMILY SSF47413 110 177 4.86E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2568 1238fa66a4164b033eccf4092b0f98eb 470 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 351 441 4.0E-4 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain Amet_2568 1238fa66a4164b033eccf4092b0f98eb 470 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 202 361 4.9E-40 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain Amet_2568 1238fa66a4164b033eccf4092b0f98eb 470 Pfam PF17482 Phage tail sheath C-terminal domain 368 469 2.4E-24 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain Amet_2568 1238fa66a4164b033eccf4092b0f98eb 470 Gene3D G3DSA:1.10.10.2290 282 359 5.0E-43 T 12-10-2018 Amet_2568 1238fa66a4164b033eccf4092b0f98eb 470 Gene3D G3DSA:3.30.1490.450 32 122 3.2E-9 T 12-10-2018 Amet_2568 1238fa66a4164b033eccf4092b0f98eb 470 Gene3D G3DSA:3.30.360.90 397 469 1.6E-5 T 12-10-2018 Amet_2568 1238fa66a4164b033eccf4092b0f98eb 470 Gene3D G3DSA:3.40.50.11790 209 389 5.0E-43 T 12-10-2018 Amet_2568 1238fa66a4164b033eccf4092b0f98eb 470 Pfam PF17481 Phage tail sheath protein beta-sandwich domain 95 199 1.1E-11 T 12-10-2018 IPR035326 Phage tail sheath protein, beta-sandwich domain Amet_3716 ddcde2fd9f9f0b9e47b2cb419226db30 365 Gene3D G3DSA:3.30.565.10 248 362 4.1E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3716 ddcde2fd9f9f0b9e47b2cb419226db30 365 Pfam PF07730 Histidine kinase 176 240 1.7E-15 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amet_3716 ddcde2fd9f9f0b9e47b2cb419226db30 365 SUPERFAMILY SSF55874 261 361 6.43E-11 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0364 a1eefad3a2f4bf2094d62ca60bfabc70 87 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 80 3.5E-44 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID Amet_0364 a1eefad3a2f4bf2094d62ca60bfabc70 87 Pfam PF12116 Stage III sporulation protein D 2 82 7.2E-44 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID Amet_0364 a1eefad3a2f4bf2094d62ca60bfabc70 87 Gene3D G3DSA:1.10.10.60 1 87 1.7E-39 T 12-10-2018 Amet_0364 a1eefad3a2f4bf2094d62ca60bfabc70 87 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 124 1.5E-12 T 12-10-2018 IPR000014 PAS domain Amet_2366 ab513fc42df94820babf57af8aae67d7 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 239 254 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 SUPERFAMILY SSF55785 10 114 1.5E-13 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2366 ab513fc42df94820babf57af8aae67d7 475 SUPERFAMILY SSF46689 366 470 7.43E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 178 191 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 453 9.6E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 453 473 9.6E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 Pfam PF02954 Bacterial regulatory protein, Fis family 430 470 6.8E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 Gene3D G3DSA:1.10.8.60 325 401 3.3E-20 T 12-10-2018 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 Gene3D G3DSA:3.30.450.20 4 119 7.5E-19 T 12-10-2018 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 Pfam PF00158 Sigma-54 interaction domain 154 320 1.1E-60 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 366 375 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_2366 ab513fc42df94820babf57af8aae67d7 475 SMART SM00091 9 75 0.0018 T 12-10-2018 IPR000014 PAS domain Amet_2366 ab513fc42df94820babf57af8aae67d7 475 Gene3D G3DSA:1.10.10.60 429 473 4.4E-14 T 12-10-2018 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 SUPERFAMILY SSF52540 154 392 1.38E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2366 ab513fc42df94820babf57af8aae67d7 475 Gene3D G3DSA:3.40.50.300 141 324 1.2E-59 T 12-10-2018 Amet_2366 ab513fc42df94820babf57af8aae67d7 475 SMART SM00382 174 316 6.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2366 ab513fc42df94820babf57af8aae67d7 475 Pfam PF08448 PAS fold 16 120 1.2E-11 T 12-10-2018 IPR013656 PAS fold-4 Amet_4062 051744800de67f06beec8ee72ed5ccee 335 SUPERFAMILY SSF54862 257 330 1.01E-8 T 12-10-2018 Amet_4062 051744800de67f06beec8ee72ed5ccee 335 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 307 318 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_4062 051744800de67f06beec8ee72ed5ccee 335 Gene3D G3DSA:1.10.1060.10 250 333 3.0E-9 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_4062 051744800de67f06beec8ee72ed5ccee 335 Pfam PF13534 4Fe-4S dicluster domain 258 322 6.9E-12 T 12-10-2018 Amet_4062 051744800de67f06beec8ee72ed5ccee 335 Pfam PF00248 Aldo/keto reductase family 16 199 1.2E-33 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amet_4062 051744800de67f06beec8ee72ed5ccee 335 SUPERFAMILY SSF51430 1 279 6.15E-59 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amet_4062 051744800de67f06beec8ee72ed5ccee 335 Gene3D G3DSA:3.20.20.100 1 249 9.1E-59 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amet_3034 a84f97cb42e3c57378324777921dd94e 410 PIRSF PIRSF029895 2 400 7.8E-153 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD Amet_3034 a84f97cb42e3c57378324777921dd94e 410 Pfam PF06898 Putative stage IV sporulation protein YqfD 8 387 3.5E-124 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD Amet_3034 a84f97cb42e3c57378324777921dd94e 410 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 6 388 9.9E-98 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 241 256 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 368 377 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 1.6E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 1.6E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 Gene3D G3DSA:3.40.50.300 140 326 6.5E-60 T 12-10-2018 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 Gene3D G3DSA:1.10.10.60 397 466 2.1E-16 T 12-10-2018 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 SUPERFAMILY SSF46689 368 465 3.05E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 SMART SM00091 8 76 2.3E-4 T 12-10-2018 IPR000014 PAS domain Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 Pfam PF02954 Bacterial regulatory protein, Fis family 424 463 6.0E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 Pfam PF00158 Sigma-54 interaction domain 156 321 3.6E-62 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 Pfam PF08448 PAS fold 17 121 3.7E-12 T 12-10-2018 IPR013656 PAS fold-4 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 Gene3D G3DSA:3.30.450.20 2 138 3.3E-17 T 12-10-2018 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 SMART SM00382 176 318 6.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 SUPERFAMILY SSF52540 155 399 4.13E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 Gene3D G3DSA:1.10.8.60 328 396 3.7E-24 T 12-10-2018 Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 127 3.8E-9 T 12-10-2018 IPR000014 PAS domain Amet_4554 c1159608fb011e3c060875fdf22a88f5 466 SUPERFAMILY SSF55785 19 127 5.06E-12 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3665 2115ee45b7377806f25c06fc0dba37ab 545 Gene3D G3DSA:3.40.630.10 2 233 2.0E-22 T 12-10-2018 Amet_3665 2115ee45b7377806f25c06fc0dba37ab 545 SUPERFAMILY SSF53187 57 530 9.88E-20 T 12-10-2018 Amet_3665 2115ee45b7377806f25c06fc0dba37ab 545 Pfam PF01546 Peptidase family M20/M25/M40 124 446 8.2E-9 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_3665 2115ee45b7377806f25c06fc0dba37ab 545 PIRSF PIRSF010386 1 544 6.0E-149 T 12-10-2018 IPR012166 Uncharacterised protein family RocB Amet_2996 95f27b0d4882944b5d8b1bbf8148fd28 336 SMART SM00471 71 194 1.9E-10 T 12-10-2018 IPR003607 HD/PDEase domain Amet_2996 95f27b0d4882944b5d8b1bbf8148fd28 336 Pfam PF13286 Phosphohydrolase-associated domain 245 328 1.5E-18 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain Amet_2996 95f27b0d4882944b5d8b1bbf8148fd28 336 Pfam PF01966 HD domain 75 184 5.8E-16 T 12-10-2018 IPR006674 HD domain Amet_2996 95f27b0d4882944b5d8b1bbf8148fd28 336 SUPERFAMILY SSF109604 28 333 9.95E-73 T 12-10-2018 Amet_2996 95f27b0d4882944b5d8b1bbf8148fd28 336 Gene3D G3DSA:1.10.3210.10 3 331 4.0E-100 T 12-10-2018 Amet_1709 d74f260bf09b2aa6a477ab2ef27c0602 249 Gene3D G3DSA:1.10.8.1040 5 64 1.2E-5 T 12-10-2018 Amet_1709 d74f260bf09b2aa6a477ab2ef27c0602 249 Gene3D G3DSA:3.10.50.40 115 205 5.6E-39 T 12-10-2018 Amet_1709 d74f260bf09b2aa6a477ab2ef27c0602 249 Gene3D G3DSA:1.10.4030.30 74 228 5.6E-39 T 12-10-2018 Amet_1709 d74f260bf09b2aa6a477ab2ef27c0602 249 Pfam PF13616 PPIC-type PPIASE domain 106 205 1.4E-24 T 12-10-2018 Amet_1709 d74f260bf09b2aa6a477ab2ef27c0602 249 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 143 163 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Amet_1709 d74f260bf09b2aa6a477ab2ef27c0602 249 SUPERFAMILY SSF54534 90 203 3.14E-34 T 12-10-2018 Amet_3380 3cbd97bdb6abecaa69158b2cf028cd61 399 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 393 2.9E-161 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Amet_3380 3cbd97bdb6abecaa69158b2cf028cd61 399 SUPERFAMILY SSF53383 12 395 5.91E-132 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3380 3cbd97bdb6abecaa69158b2cf028cd61 399 Gene3D G3DSA:3.90.1150.10 22 386 3.0E-153 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3380 3cbd97bdb6abecaa69158b2cf028cd61 399 Gene3D G3DSA:3.40.640.10 57 302 3.0E-153 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3380 3cbd97bdb6abecaa69158b2cf028cd61 399 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_3380 3cbd97bdb6abecaa69158b2cf028cd61 399 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 396 70.517 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Amet_3380 3cbd97bdb6abecaa69158b2cf028cd61 399 Pfam PF00202 Aminotransferase class-III 22 392 8.7E-127 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_3380 3cbd97bdb6abecaa69158b2cf028cd61 399 PIRSF PIRSF000521 4 157 8.9E-12 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_3380 3cbd97bdb6abecaa69158b2cf028cd61 399 PIRSF PIRSF000521 166 396 3.4E-39 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_1428 3280f70f1ebc6312e411dc0c1ab85174 303 Gene3D G3DSA:1.10.10.60 61 118 1.1E-12 T 12-10-2018 Amet_1428 3280f70f1ebc6312e411dc0c1ab85174 303 SUPERFAMILY SSF46689 8 58 1.16E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1428 3280f70f1ebc6312e411dc0c1ab85174 303 SUPERFAMILY SSF46689 60 110 1.43E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1428 3280f70f1ebc6312e411dc0c1ab85174 303 Gene3D G3DSA:1.10.10.60 7 58 2.7E-16 T 12-10-2018 Amet_1428 3280f70f1ebc6312e411dc0c1ab85174 303 SMART SM00342 24 107 1.3E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_1428 3280f70f1ebc6312e411dc0c1ab85174 303 Pfam PF12833 Helix-turn-helix domain 30 107 1.1E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_0333 5c01523b81e26a8a0517db024db2b201 150 Pfam PF00498 FHA domain 71 135 1.0E-19 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Amet_0333 5c01523b81e26a8a0517db024db2b201 150 SUPERFAMILY SSF49879 47 147 1.4E-25 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Amet_0333 5c01523b81e26a8a0517db024db2b201 150 SMART SM00240 70 120 1.5E-12 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Amet_0333 5c01523b81e26a8a0517db024db2b201 150 Gene3D G3DSA:2.60.200.20 31 150 1.2E-27 T 12-10-2018 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 Pfam PF00675 Insulinase (Peptidase family M16) 59 138 2.0E-5 T 12-10-2018 IPR011765 Peptidase M16, N-terminal Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 SUPERFAMILY SSF63411 523 773 2.67E-71 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 SUPERFAMILY SSF63411 261 522 1.68E-61 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 Gene3D G3DSA:3.30.830.10 531 780 4.3E-154 T 12-10-2018 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 SUPERFAMILY SSF63411 7 243 7.51E-47 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 Gene3D G3DSA:3.30.830.10 496 948 4.3E-154 T 12-10-2018 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 Gene3D G3DSA:3.30.830.10 1 255 7.0E-91 T 12-10-2018 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 Pfam PF08367 Peptidase M16C associated 465 714 2.2E-73 T 12-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 Gene3D G3DSA:3.30.830.10 256 487 6.9E-68 T 12-10-2018 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 SMART SM01264 464 714 3.6E-102 T 12-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 Pfam PF05193 Peptidase M16 inactive domain 207 389 2.9E-18 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Amet_1701 6fb4c8ffcafa750eb7d0729bfc641164 975 SUPERFAMILY SSF63411 777 974 2.29E-34 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_1130 a0290bae70a87406f12b6651fd6c869c 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 234 4.6E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1130 a0290bae70a87406f12b6651fd6c869c 250 SUPERFAMILY SSF161098 58 241 6.41E-18 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1130 a0290bae70a87406f12b6651fd6c869c 250 Gene3D G3DSA:1.10.3720.10 55 249 8.2E-16 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1111 cb75aa707ac07c223aeed0c54f5950fb 455 PIRSF PIRSF006603 1 445 2.0E-98 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1111 cb75aa707ac07c223aeed0c54f5950fb 455 Pfam PF01554 MatE 247 402 5.2E-26 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1111 cb75aa707ac07c223aeed0c54f5950fb 455 Pfam PF01554 MatE 22 183 1.7E-29 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1111 cb75aa707ac07c223aeed0c54f5950fb 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 414 7.7E-66 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Gene3D G3DSA:2.60.40.60 364 457 3.0E-10 T 12-10-2018 Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Pfam PF00395 S-layer homology domain 2113 2148 6.7E-5 T 12-10-2018 IPR001119 S-layer homology domain Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Pfam PF00395 S-layer homology domain 2167 2209 2.4E-12 T 12-10-2018 IPR001119 S-layer homology domain Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Pfam PF00395 S-layer homology domain 2235 2276 9.6E-6 T 12-10-2018 IPR001119 S-layer homology domain Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Gene3D G3DSA:3.10.20.660 1575 1657 2.3E-8 T 12-10-2018 Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Gene3D G3DSA:3.10.20.660 1756 1836 4.9E-8 T 12-10-2018 Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 SUPERFAMILY SSF49313 359 451 9.16E-9 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Pfam PF12733 Cadherin-like beta sandwich domain 1504 1573 1.2E-9 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1794 1835 3.3E-7 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1759 1831 8.5E-12 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1578 1653 2.2E-12 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 SMART SM00112 379 454 3.8E-5 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 Amet_1534 a89c4b7085776744e34877b82cc9669d 2291 Pfam PF14252 Domain of unknown function (DUF4347) 38 189 6.7E-46 T 12-10-2018 IPR025592 Domain of unknown function DUF4347 Amet_2818 71e00a8cc1ba0969b3d079cbf9d5dff2 337 SUPERFAMILY SSF53822 51 331 1.81E-56 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_2818 71e00a8cc1ba0969b3d079cbf9d5dff2 337 Pfam PF13407 Periplasmic binding protein domain 51 305 4.0E-44 T 12-10-2018 IPR025997 Periplasmic binding protein Amet_2818 71e00a8cc1ba0969b3d079cbf9d5dff2 337 Gene3D G3DSA:3.40.50.2300 152 326 2.5E-72 T 12-10-2018 Amet_2818 71e00a8cc1ba0969b3d079cbf9d5dff2 337 Gene3D G3DSA:3.40.50.2300 61 318 2.5E-72 T 12-10-2018 Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 Pfam PF12831 FAD dependent oxidoreductase 144 192 6.1E-10 T 12-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 Pfam PF04205 FMN-binding domain 45 116 8.1E-15 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 271 638 3.9E-87 T 12-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 Pfam PF00890 FAD binding domain 284 625 7.0E-51 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 Gene3D G3DSA:3.50.50.60 99 216 4.1E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 SMART SM00900 45 119 5.5E-21 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 SUPERFAMILY SSF56425 429 581 1.64E-32 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 Gene3D G3DSA:3.50.50.60 246 640 7.1E-102 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 Gene3D G3DSA:3.90.700.10 429 578 7.1E-102 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0327 cf24b97b93a134a464735c0ac1b18ed9 644 SUPERFAMILY SSF51905 137 642 7.42E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 816 881 2.6E-19 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 Gene3D G3DSA:1.10.287.380 809 880 2.2E-18 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 Gene3D G3DSA:3.90.740.10 179 346 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 Gene3D G3DSA:3.40.50.620 25 527 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 PRINTS PR00986 Valyl-tRNA synthetase signature 478 496 1.9E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 PRINTS PR00986 Valyl-tRNA synthetase signature 349 362 1.9E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 PRINTS PR00986 Valyl-tRNA synthetase signature 234 251 1.9E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 PRINTS PR00986 Valyl-tRNA synthetase signature 447 468 1.9E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 1.9E-38 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 SUPERFAMILY SSF50677 195 345 1.83E-62 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 SUPERFAMILY SSF46589 816 880 4.5E-16 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 881 15.992 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 863 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 SUPERFAMILY SSF47323 578 831 2.8E-73 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 Gene3D G3DSA:1.10.730.10 5 743 0.0 T 12-10-2018 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 SUPERFAMILY SSF52374 5 576 9.73E-147 T 12-10-2018 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 565 2.8E-216 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_1402 9f4ec2d358b98d818c361f1fa6c2626c 884 Pfam PF08264 Anticodon-binding domain of tRNA 609 755 3.7E-46 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Amet_3426 e5ee3a0caf3b9ba5146941dc847e2422 403 SUPERFAMILY SSF53244 259 397 2.27E-29 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_3426 e5ee3a0caf3b9ba5146941dc847e2422 403 Gene3D G3DSA:3.90.190.20 256 403 2.2E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_3426 e5ee3a0caf3b9ba5146941dc847e2422 403 SUPERFAMILY SSF53623 43 253 7.59E-42 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_3426 e5ee3a0caf3b9ba5146941dc847e2422 403 Pfam PF08245 Mur ligase middle domain 48 235 3.1E-35 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amet_3426 e5ee3a0caf3b9ba5146941dc847e2422 403 Gene3D G3DSA:3.40.1190.10 33 253 7.2E-48 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_3426 e5ee3a0caf3b9ba5146941dc847e2422 403 Pfam PF02875 Mur ligase family, glutamate ligase domain 258 339 7.1E-13 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amet_4767 42eee2d544d5bbac054db6280d0bddc7 199 Pfam PF13302 Acetyltransferase (GNAT) domain 4 134 2.2E-16 T 12-10-2018 IPR000182 GNAT domain Amet_4767 42eee2d544d5bbac054db6280d0bddc7 199 Gene3D G3DSA:3.40.630.30 1 149 1.2E-28 T 12-10-2018 Amet_4767 42eee2d544d5bbac054db6280d0bddc7 199 SUPERFAMILY SSF55729 3 138 2.52E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_3614 d19d0eaebef13ea85ed533d3319a751f 359 SUPERFAMILY SSF53383 3 358 1.65E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3614 d19d0eaebef13ea85ed533d3319a751f 359 Gene3D G3DSA:3.90.1150.10 21 354 2.3E-118 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3614 d19d0eaebef13ea85ed533d3319a751f 359 Pfam PF00155 Aminotransferase class I and II 25 353 1.4E-49 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_3614 d19d0eaebef13ea85ed533d3319a751f 359 Gene3D G3DSA:3.40.640.10 33 260 2.3E-118 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3614 d19d0eaebef13ea85ed533d3319a751f 359 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 3 354 3.1E-94 T 12-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 Amet_0091 d6e78cd0b0a4f76ca3fd0045913bc1fa 279 PIRSF PIRSF005917 1 279 7.6E-104 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Amet_0091 d6e78cd0b0a4f76ca3fd0045913bc1fa 279 SUPERFAMILY SSF53790 3 221 1.57E-82 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amet_0091 d6e78cd0b0a4f76ca3fd0045913bc1fa 279 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 5 223 36.612 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Amet_0091 d6e78cd0b0a4f76ca3fd0045913bc1fa 279 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 83 94 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Amet_0091 d6e78cd0b0a4f76ca3fd0045913bc1fa 279 Gene3D G3DSA:3.30.950.10 113 226 2.5E-39 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amet_0091 d6e78cd0b0a4f76ca3fd0045913bc1fa 279 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 6 276 1.6E-87 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Amet_0091 d6e78cd0b0a4f76ca3fd0045913bc1fa 279 Gene3D G3DSA:3.40.1010.10 1 112 1.2E-45 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amet_0091 d6e78cd0b0a4f76ca3fd0045913bc1fa 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 8.1E-29 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amet_2502 811c0ecc6d846fcd43fbdc9696739946 330 Gene3D G3DSA:3.30.420.40 134 297 5.3E-69 T 12-10-2018 Amet_2502 811c0ecc6d846fcd43fbdc9696739946 330 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 9 22 3.1E-12 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_2502 811c0ecc6d846fcd43fbdc9696739946 330 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 165 186 3.1E-12 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_2502 811c0ecc6d846fcd43fbdc9696739946 330 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 3.1E-12 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_2502 811c0ecc6d846fcd43fbdc9696739946 330 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 104 123 3.1E-12 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_2502 811c0ecc6d846fcd43fbdc9696739946 330 Pfam PF00814 Glycoprotease family 54 310 7.6E-30 T 12-10-2018 IPR000905 Gcp-like domain Amet_2502 811c0ecc6d846fcd43fbdc9696739946 330 Gene3D G3DSA:3.30.420.40 9 314 5.3E-69 T 12-10-2018 Amet_2502 811c0ecc6d846fcd43fbdc9696739946 330 SUPERFAMILY SSF53067 8 311 1.11E-20 T 12-10-2018 Amet_2778 321ebe6b69f04bd456ef9551e3d3d990 292 Pfam PF03193 RsgA GTPase 61 225 6.2E-62 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Amet_2778 321ebe6b69f04bd456ef9551e3d3d990 292 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 290 38.485 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Amet_2778 321ebe6b69f04bd456ef9551e3d3d990 292 SUPERFAMILY SSF52540 67 288 1.06E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2778 321ebe6b69f04bd456ef9551e3d3d990 292 Pfam PF16745 RsgA N-terminal domain 3 58 5.2E-20 T 12-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal Amet_2778 321ebe6b69f04bd456ef9551e3d3d990 292 Gene3D G3DSA:3.40.50.300 63 225 8.0E-50 T 12-10-2018 Amet_2778 321ebe6b69f04bd456ef9551e3d3d990 292 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 283 2.2E-78 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Amet_2778 321ebe6b69f04bd456ef9551e3d3d990 292 Gene3D G3DSA:1.10.40.50 227 292 1.3E-20 T 12-10-2018 Amet_2778 321ebe6b69f04bd456ef9551e3d3d990 292 SUPERFAMILY SSF50249 1 65 1.06E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2778 321ebe6b69f04bd456ef9551e3d3d990 292 Gene3D G3DSA:2.40.50.140 1 62 1.6E-22 T 12-10-2018 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 PIRSF PIRSF000159 1 1176 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 SUPERFAMILY SSF52518 788 1174 4.67E-135 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 SUPERFAMILY SSF53323 415 668 2.35E-88 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Pfam PF10371 Domain of unknown function 629 678 1.6E-23 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Gene3D G3DSA:3.30.70.20 669 784 2.8E-44 T 12-10-2018 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 SMART SM00890 621 679 1.8E-30 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Gene3D G3DSA:3.40.50.970 3 258 1.1E-111 T 12-10-2018 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 1.5E-35 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 374 7.9E-16 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 5.9E-9 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 SUPERFAMILY SSF54862 665 833 4.29E-21 T 12-10-2018 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 SUPERFAMILY SSF52518 4 258 3.53E-80 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 SUPERFAMILY SSF52922 260 414 3.3E-48 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Gene3D G3DSA:3.40.50.970 787 1173 1.6E-175 T 12-10-2018 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Gene3D G3DSA:3.40.920.10 415 625 2.0E-93 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Gene3D G3DSA:4.10.780.10 628 668 2.5E-5 T 12-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Gene3D G3DSA:3.40.50.920 259 413 4.4E-59 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 1171 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Pfam PF13484 4Fe-4S double cluster binding domain 688 757 1.7E-9 T 12-10-2018 Amet_1676 0c8a3be32b539e94a9d57d9a3511e57f 1176 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 248 1.7E-81 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amet_1677 c16ebabd539ffc2c0b41f0c6897dd8fe 491 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 3 491 2.0E-115 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Amet_1677 c16ebabd539ffc2c0b41f0c6897dd8fe 491 Pfam PF02446 4-alpha-glucanotransferase 9 470 8.4E-168 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Amet_1677 c16ebabd539ffc2c0b41f0c6897dd8fe 491 SUPERFAMILY SSF51445 3 491 2.06E-172 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_1677 c16ebabd539ffc2c0b41f0c6897dd8fe 491 Gene3D G3DSA:3.20.20.80 1 491 1.6E-189 T 12-10-2018 Amet_2166 16bf55b2ebfadd414a35fea548add3ca 68 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 11 67 1.1E-20 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 Amet_2166 16bf55b2ebfadd414a35fea548add3ca 68 Pfam PF08141 Small acid-soluble spore protein H family 11 67 3.4E-24 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 Amet_2166 16bf55b2ebfadd414a35fea548add3ca 68 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 10 67 5.0E-26 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 Amet_2166 16bf55b2ebfadd414a35fea548add3ca 68 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 10 68 19.382 T 12-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 Amet_3251 c980d30dd173dc597eafc31a82c42ff7 142 PIRSF PIRSF004923 1 142 9.6E-26 T 12-10-2018 IPR026268 Protein RseC Amet_3251 c980d30dd173dc597eafc31a82c42ff7 142 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 7 138 9.2E-32 T 12-10-2018 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 SUPERFAMILY SSF48029 11 105 3.4E-23 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 SUPERFAMILY SSF48029 119 330 1.02E-72 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 Pfam PF14841 FliG middle domain 120 194 1.3E-31 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 PIRSF PIRSF003161 4 339 2.8E-125 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 Gene3D G3DSA:1.10.220.30 5 90 2.5E-21 T 12-10-2018 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 339 2.0E-142 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 Pfam PF01706 FliG C-terminal domain 223 329 5.0E-45 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 Gene3D G3DSA:1.10.220.30 108 199 3.2E-34 T 12-10-2018 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 Gene3D G3DSA:1.10.220.30 200 339 4.9E-52 T 12-10-2018 Amet_2724 8848fc8f8801db8b43dd22581955e01f 339 Pfam PF14842 FliG N-terminal domain 9 112 1.3E-38 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 Gene3D G3DSA:3.20.20.450 426 674 1.4E-90 T 12-10-2018 IPR035919 EAL domain superfamily Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 SUPERFAMILY SSF55073 260 412 1.18E-36 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 Gene3D G3DSA:3.30.70.270 253 425 2.1E-41 T 12-10-2018 Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 Pfam PF00563 EAL domain 428 663 2.1E-71 T 12-10-2018 IPR001633 EAL domain Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 SUPERFAMILY SSF55785 141 252 1.77E-16 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 SMART SM00267 244 412 1.2E-41 T 12-10-2018 IPR000160 GGDEF domain Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 409 7.4E-27 T 12-10-2018 IPR000160 GGDEF domain Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 SUPERFAMILY SSF141868 428 672 6.54E-84 T 12-10-2018 IPR035919 EAL domain superfamily Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 SMART SM00052 422 668 2.1E-98 T 12-10-2018 IPR001633 EAL domain Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 SMART SM00091 128 194 1.0E-6 T 12-10-2018 IPR000014 PAS domain Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 407 1.6E-34 T 12-10-2018 IPR000160 GGDEF domain Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 Pfam PF13426 PAS domain 142 242 6.7E-8 T 12-10-2018 IPR000014 PAS domain Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 251 7.1E-15 T 12-10-2018 IPR000014 PAS domain Amet_2925 091ec6d39b243fe79b6c37f5b1723cbb 674 Gene3D G3DSA:3.30.450.20 131 252 5.2E-19 T 12-10-2018 Amet_2297 445792a228e3187d384afbe237715f4c 134 Gene3D G3DSA:3.40.50.1380 1 134 5.8E-56 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amet_2297 445792a228e3187d384afbe237715f4c 134 Pfam PF02142 MGS-like domain 21 107 7.6E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Amet_2297 445792a228e3187d384afbe237715f4c 134 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 32.589 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Amet_2297 445792a228e3187d384afbe237715f4c 134 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 2 121 2.6E-58 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Amet_2297 445792a228e3187d384afbe237715f4c 134 SUPERFAMILY SSF52335 1 129 6.93E-52 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amet_2297 445792a228e3187d384afbe237715f4c 134 PIRSF PIRSF006614 1 134 9.2E-61 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Amet_2297 445792a228e3187d384afbe237715f4c 134 SMART SM00851 14 107 5.2E-21 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Amet_2297 445792a228e3187d384afbe237715f4c 134 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 62 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Amet_1684 cbc3d4028f91e5326f91339b85d29152 425 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 22 417 1.3E-96 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Amet_1684 cbc3d4028f91e5326f91339b85d29152 425 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Amet_1684 cbc3d4028f91e5326f91339b85d29152 425 Pfam PF00860 Permease family 24 377 5.6E-84 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Amet_0369 8cce0c8c956dfafc2c1e106fb63b29bf 363 SUPERFAMILY SSF117143 196 321 4.32E-22 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Amet_0369 8cce0c8c956dfafc2c1e106fb63b29bf 363 Pfam PF00460 Flagella basal body rod protein 5 35 2.3E-14 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Amet_0369 8cce0c8c956dfafc2c1e106fb63b29bf 363 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Amet_0369 8cce0c8c956dfafc2c1e106fb63b29bf 363 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 287 357 2.2E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Amet_0369 8cce0c8c956dfafc2c1e106fb63b29bf 363 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 172 243 1.4E-24 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 SUPERFAMILY SSF53850 91 290 1.96E-29 T 12-10-2018 Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 Gene3D G3DSA:3.40.190.10 92 286 6.5E-29 T 12-10-2018 Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.8E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 Pfam PF03466 LysR substrate binding domain 92 291 2.5E-29 T 12-10-2018 IPR005119 LysR, substrate-binding Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 Gene3D G3DSA:3.40.190.10 163 264 6.5E-29 T 12-10-2018 Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 Gene3D G3DSA:1.10.10.10 1 88 1.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4708 b96a699f283fe5249e8250c82ee765e0 296 SUPERFAMILY SSF46785 1 86 1.36E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0846 46d52f16ce069c25ba9ab08c51db5188 651 Gene3D G3DSA:3.40.50.300 12 341 6.5E-17 T 12-10-2018 Amet_0846 46d52f16ce069c25ba9ab08c51db5188 651 SUPERFAMILY SSF52540 22 154 8.78E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0846 46d52f16ce069c25ba9ab08c51db5188 651 Pfam PF13476 AAA domain 23 260 2.3E-9 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain Amet_0846 46d52f16ce069c25ba9ab08c51db5188 651 SUPERFAMILY SSF52540 24 574 4.07E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0314 8c10adcefd3e692a0221b8f2767c0bfd 190 SUPERFAMILY SSF48498 79 164 1.13E-14 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_0314 8c10adcefd3e692a0221b8f2767c0bfd 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 7.5E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0314 8c10adcefd3e692a0221b8f2767c0bfd 190 SUPERFAMILY SSF46689 3 84 5.82E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0314 8c10adcefd3e692a0221b8f2767c0bfd 190 Pfam PF08359 YsiA-like protein, C-terminal region 62 163 2.8E-6 T 12-10-2018 IPR013570 Transcription regulator YsiA, C-terminal Amet_0314 8c10adcefd3e692a0221b8f2767c0bfd 190 Gene3D G3DSA:1.10.357.10 55 182 2.3E-20 T 12-10-2018 Amet_0314 8c10adcefd3e692a0221b8f2767c0bfd 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 9.1E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0314 8c10adcefd3e692a0221b8f2767c0bfd 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 9.1E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0314 8c10adcefd3e692a0221b8f2767c0bfd 190 Gene3D G3DSA:1.10.10.60 8 54 7.3E-20 T 12-10-2018 Amet_3464 3538aa18dce8089ca5dc115b397476c1 175 Pfam PF07308 Protein of unknown function (DUF1456) 108 174 4.7E-23 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 Amet_3464 3538aa18dce8089ca5dc115b397476c1 175 Pfam PF07308 Protein of unknown function (DUF1456) 3 85 4.3E-24 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 Amet_0285 888d14864072b768409e663bbfb69435 569 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 SUPERFAMILY SSF53067 1 158 6.79E-48 T 12-10-2018 Amet_0285 888d14864072b768409e663bbfb69435 569 Gene3D G3DSA:2.60.34.10 350 537 2.1E-47 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 PRINTS PR00301 70kDa heat shock protein signature 306 322 7.6E-44 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 PRINTS PR00301 70kDa heat shock protein signature 337 357 7.6E-44 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.6E-44 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 PRINTS PR00301 70kDa heat shock protein signature 174 184 7.6E-44 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.6E-44 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 PRINTS PR00301 70kDa heat shock protein signature 452 468 7.6E-44 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 PRINTS PR00301 70kDa heat shock protein signature 54 62 7.6E-44 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 PRINTS PR00301 70kDa heat shock protein signature 114 134 7.6E-44 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 PRINTS PR00301 70kDa heat shock protein signature 363 382 7.6E-44 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 SUPERFAMILY SSF53067 163 353 1.12E-52 T 12-10-2018 Amet_0285 888d14864072b768409e663bbfb69435 569 Gene3D G3DSA:3.90.640.10 200 281 1.5E-119 T 12-10-2018 Amet_0285 888d14864072b768409e663bbfb69435 569 Gene3D G3DSA:3.30.420.40 5 349 1.5E-119 T 12-10-2018 Amet_0285 888d14864072b768409e663bbfb69435 569 Gene3D G3DSA:3.30.420.40 161 339 1.5E-119 T 12-10-2018 Amet_0285 888d14864072b768409e663bbfb69435 569 SUPERFAMILY SSF100920 362 488 2.22E-35 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 Pfam PF00012 Hsp70 protein 78 562 1.3E-139 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_0285 888d14864072b768409e663bbfb69435 569 Pfam PF00012 Hsp70 protein 4 76 4.2E-17 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3769 d03d5973f240ccf8ad254f4dbdad239b 657 Gene3D G3DSA:3.40.50.300 38 295 4.3E-24 T 12-10-2018 Amet_3769 d03d5973f240ccf8ad254f4dbdad239b 657 Gene3D G3DSA:3.40.50.300 480 639 6.6E-28 T 12-10-2018 Amet_3769 d03d5973f240ccf8ad254f4dbdad239b 657 SUPERFAMILY SSF52540 57 571 3.51E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3769 d03d5973f240ccf8ad254f4dbdad239b 657 SMART SM00491 499 630 2.1E-10 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Amet_3769 d03d5973f240ccf8ad254f4dbdad239b 657 Pfam PF13307 Helicase C-terminal domain 485 626 3.1E-25 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 Gene3D G3DSA:3.30.559.10 191 435 2.7E-89 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 SUPERFAMILY SSF52777 202 437 9.34E-83 T 12-10-2018 Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 Gene3D G3DSA:2.40.50.100 1 89 1.2E-24 T 12-10-2018 Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 Pfam PF02817 e3 binding domain 139 173 4.2E-11 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 Gene3D G3DSA:4.10.320.10 129 178 2.8E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 SUPERFAMILY SSF51230 2 93 2.49E-26 T 12-10-2018 IPR011053 Single hybrid motif Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 Pfam PF00364 Biotin-requiring enzyme 3 75 9.0E-25 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 207 436 8.1E-89 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Amet_1253 1a17151cb84140cc74eb797dc04aecad 438 SUPERFAMILY SSF47005 133 175 1.96E-9 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Amet_2820 4571fce87f0bdd475b128232b04459f5 266 SUPERFAMILY SSF51695 8 261 1.12E-64 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amet_2820 4571fce87f0bdd475b128232b04459f5 266 Gene3D G3DSA:3.20.20.190 1 265 2.7E-65 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amet_2820 4571fce87f0bdd475b128232b04459f5 266 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 13 255 3.2E-40 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Amet_0892 d7dadffc81ca3d6a9b89f5a85a38deac 327 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 263 276 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amet_0892 d7dadffc81ca3d6a9b89f5a85a38deac 327 SUPERFAMILY SSF53613 12 319 2.18E-89 T 12-10-2018 IPR029056 Ribokinase-like Amet_0892 d7dadffc81ca3d6a9b89f5a85a38deac 327 Pfam PF00294 pfkB family carbohydrate kinase 15 311 5.1E-63 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Amet_0892 d7dadffc81ca3d6a9b89f5a85a38deac 327 Gene3D G3DSA:3.40.1190.20 13 322 2.0E-100 T 12-10-2018 IPR029056 Ribokinase-like Amet_0640 3277147671b07362ecde215ce675bc33 547 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 5 81 2.3E-10 T 12-10-2018 Amet_0640 3277147671b07362ecde215ce675bc33 547 Pfam PF10531 SLBB domain 354 402 5.4E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0640 3277147671b07362ecde215ce675bc33 547 Gene3D G3DSA:3.10.20.600 343 436 1.2E-34 T 12-10-2018 Amet_0640 3277147671b07362ecde215ce675bc33 547 Gene3D G3DSA:3.40.50.11540 164 342 4.5E-79 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0640 3277147671b07362ecde215ce675bc33 547 SUPERFAMILY SSF52833 4 96 1.57E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_0640 3277147671b07362ecde215ce675bc33 547 Gene3D G3DSA:3.40.30.10 5 98 1.7E-28 T 12-10-2018 Amet_0640 3277147671b07362ecde215ce675bc33 547 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 442 525 3.3E-31 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0640 3277147671b07362ecde215ce675bc33 547 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 453 464 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0640 3277147671b07362ecde215ce675bc33 547 SUPERFAMILY SSF142019 111 351 2.22E-94 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0640 3277147671b07362ecde215ce675bc33 547 Gene3D G3DSA:1.20.1440.230 438 538 2.9E-32 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0640 3277147671b07362ecde215ce675bc33 547 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 159 330 2.3E-48 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0640 3277147671b07362ecde215ce675bc33 547 SUPERFAMILY SSF142984 352 435 2.09E-25 T 12-10-2018 Amet_0640 3277147671b07362ecde215ce675bc33 547 SMART SM00928 440 485 9.4E-23 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0640 3277147671b07362ecde215ce675bc33 547 SUPERFAMILY SSF140490 436 537 3.92E-36 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4052 a40580b09fedc80ab134f96b2847b81d 220 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 16 114 1.1E-35 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family Amet_4052 a40580b09fedc80ab134f96b2847b81d 220 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 22 111 6.1E-30 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 Gene3D G3DSA:3.40.50.300 471 727 5.8E-92 T 12-10-2018 Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 Pfam PF00005 ABC transporter 497 646 8.7E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 Gene3D G3DSA:3.90.70.10 1 147 1.9E-52 T 12-10-2018 Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 Pfam PF00664 ABC transporter transmembrane region 164 434 1.5E-53 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 SMART SM00382 506 707 2.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 ProSitePatterns PS00211 ABC transporters family signature. 618 632 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 10 713 2.1E-207 T 12-10-2018 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 SUPERFAMILY SSF52540 471 716 3.37E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 SUPERFAMILY SSF90123 151 463 7.46E-68 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 Gene3D G3DSA:1.20.1560.10 149 465 2.7E-94 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_1032 b887fe11abf6689c6cfbbf17b7707e0b 735 Pfam PF03412 Peptidase C39 family 5 137 1.8E-40 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 Amet_2891 e1be74ed8875ae2bff02b779712dd803 429 Gene3D G3DSA:3.30.830.10 14 239 2.9E-59 T 12-10-2018 Amet_2891 e1be74ed8875ae2bff02b779712dd803 429 Pfam PF00675 Insulinase (Peptidase family M16) 65 177 7.0E-17 T 12-10-2018 IPR011765 Peptidase M16, N-terminal Amet_2891 e1be74ed8875ae2bff02b779712dd803 429 Pfam PF05193 Peptidase M16 inactive domain 185 363 4.4E-17 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Amet_2891 e1be74ed8875ae2bff02b779712dd803 429 SUPERFAMILY SSF63411 282 427 4.17E-13 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_2891 e1be74ed8875ae2bff02b779712dd803 429 SUPERFAMILY SSF63411 9 231 1.6E-43 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_2891 e1be74ed8875ae2bff02b779712dd803 429 Gene3D G3DSA:3.30.830.10 241 428 2.0E-29 T 12-10-2018 Amet_4220 48940390061335efe00787ee649e5b27 781 SMART SM00487 189 442 0.0095 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_4220 48940390061335efe00787ee649e5b27 781 SUPERFAMILY SSF52540 209 742 8.07E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4220 48940390061335efe00787ee649e5b27 781 Gene3D G3DSA:3.90.320.10 21 167 4.0E-6 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Amet_4220 48940390061335efe00787ee649e5b27 781 Gene3D G3DSA:3.40.50.300 206 548 2.9E-52 T 12-10-2018 Amet_4220 48940390061335efe00787ee649e5b27 781 SMART SM00488 184 421 9.3E-4 T 12-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 Amet_4220 48940390061335efe00787ee649e5b27 781 Pfam PF12705 PD-(D/E)XK nuclease superfamily 53 175 1.7E-5 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Amet_4220 48940390061335efe00787ee649e5b27 781 Gene3D G3DSA:1.10.30.20 278 337 2.9E-52 T 12-10-2018 Amet_4220 48940390061335efe00787ee649e5b27 781 Gene3D G3DSA:1.10.275.40 394 515 2.9E-52 T 12-10-2018 Amet_4220 48940390061335efe00787ee649e5b27 781 Gene3D G3DSA:3.40.50.300 564 773 3.9E-57 T 12-10-2018 Amet_4220 48940390061335efe00787ee649e5b27 781 Pfam PF06777 Helical and beta-bridge domain 484 581 1.4E-10 T 12-10-2018 IPR010643 Helical and beta-bridge domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-2564830|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 Amet_4220 48940390061335efe00787ee649e5b27 781 Pfam PF06733 DEAD_2 276 398 1.4E-12 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 Amet_4220 48940390061335efe00787ee649e5b27 781 SMART SM00491 611 748 2.5E-14 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Amet_4220 48940390061335efe00787ee649e5b27 781 Pfam PF13307 Helicase C-terminal domain 595 760 7.1E-38 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Amet_4408 6c7b55a6822230762e96fc4d7511e95f 253 Gene3D G3DSA:2.40.440.10 56 172 2.4E-36 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amet_4408 6c7b55a6822230762e96fc4d7511e95f 253 SUPERFAMILY SSF47090 179 250 8.16E-16 T 12-10-2018 IPR036365 PGBD-like superfamily Amet_4408 6c7b55a6822230762e96fc4d7511e95f 253 Gene3D G3DSA:1.10.101.10 180 251 6.4E-13 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amet_4408 6c7b55a6822230762e96fc4d7511e95f 253 Pfam PF01471 Putative peptidoglycan binding domain 191 247 6.9E-11 T 12-10-2018 IPR002477 Peptidoglycan binding-like Amet_4408 6c7b55a6822230762e96fc4d7511e95f 253 Pfam PF03734 L,D-transpeptidase catalytic domain 65 170 1.2E-19 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Amet_4408 6c7b55a6822230762e96fc4d7511e95f 253 SUPERFAMILY SSF141523 58 170 3.66E-32 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amet_1457 fe88553f22585630b13e359a1e087d18 224 Gene3D G3DSA:1.10.10.10 125 224 7.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1457 fe88553f22585630b13e359a1e087d18 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 1.6E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1457 fe88553f22585630b13e359a1e087d18 224 Pfam PF00072 Response regulator receiver domain 4 113 1.6E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1457 fe88553f22585630b13e359a1e087d18 224 SUPERFAMILY SSF52172 1 183 1.32E-35 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1457 fe88553f22585630b13e359a1e087d18 224 Gene3D G3DSA:3.40.50.2300 2 124 3.2E-30 T 12-10-2018 Amet_1457 fe88553f22585630b13e359a1e087d18 224 SMART SM00862 148 223 2.1E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1457 fe88553f22585630b13e359a1e087d18 224 SMART SM00448 2 112 2.1E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2286 83d96880978d6833633c43b32c1ea826 173 Gene3D G3DSA:1.10.1760.20 1 167 5.1E-14 T 12-10-2018 Amet_2286 83d96880978d6833633c43b32c1ea826 173 Pfam PF07456 Heptaprenyl diphosphate synthase component I 12 157 8.3E-48 T 12-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I Amet_2286 83d96880978d6833633c43b32c1ea826 173 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 120 4.0E-4 T 12-10-2018 Amet_2286 83d96880978d6833633c43b32c1ea826 173 PIRSF PIRSF027391 1 171 9.0E-48 T 12-10-2018 IPR014535 Predicted heptaprenyl diphosphate synthase, component I Amet_1588 752f6eaa00458eace3ed04af44b43ca1 102 Pfam PF03551 Transcriptional regulator PadR-like family 18 88 3.9E-21 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amet_1588 752f6eaa00458eace3ed04af44b43ca1 102 SUPERFAMILY SSF46785 2 100 7.21E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1588 752f6eaa00458eace3ed04af44b43ca1 102 Gene3D G3DSA:1.10.10.10 1 102 1.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0828 86b63bbd1d21d92ee2a5a66c8c486942 468 SUPERFAMILY SSF52794 3 101 3.31E-36 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Amet_0828 86b63bbd1d21d92ee2a5a66c8c486942 468 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 6.0E-15 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Amet_0828 86b63bbd1d21d92ee2a5a66c8c486942 468 Gene3D G3DSA:3.40.50.2300 1 103 3.9E-40 T 12-10-2018 Amet_0828 86b63bbd1d21d92ee2a5a66c8c486942 468 Pfam PF02378 Phosphotransferase system, EIIC 132 395 1.1E-16 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Amet_0828 86b63bbd1d21d92ee2a5a66c8c486942 468 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 88 3.6E-33 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 Amet_0828 86b63bbd1d21d92ee2a5a66c8c486942 468 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 114 451 5.0E-139 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 SUPERFAMILY SSF46894 149 214 1.6E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 Pfam PF00072 Response regulator receiver domain 6 118 4.4E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 Gene3D G3DSA:3.40.50.12740 4 214 3.6E-76 T 12-10-2018 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.8E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 SUPERFAMILY SSF52172 3 135 2.28E-36 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 SMART SM00448 4 117 2.3E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.7E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.7E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.7E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_3141 e403e3abb2b3b1ee4e2b4c7e6773832c 217 SMART SM00421 152 209 5.6E-26 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_2790 0e4bf80d441fd4fefb0608a1cb85e784 200 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Amet_2790 0e4bf80d441fd4fefb0608a1cb85e784 200 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 183 2.5E-72 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Amet_2790 0e4bf80d441fd4fefb0608a1cb85e784 200 Gene3D G3DSA:3.30.63.10 36 95 9.3E-65 T 12-10-2018 Amet_2790 0e4bf80d441fd4fefb0608a1cb85e784 200 Pfam PF00625 Guanylate kinase 7 184 3.0E-47 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Amet_2790 0e4bf80d441fd4fefb0608a1cb85e784 200 Hamap MF_00328 Guanylate kinase [gmk]. 3 186 36.633 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Amet_2790 0e4bf80d441fd4fefb0608a1cb85e784 200 Gene3D G3DSA:3.40.50.300 9 182 9.3E-65 T 12-10-2018 Amet_2790 0e4bf80d441fd4fefb0608a1cb85e784 200 SMART SM00072 4 186 9.7E-56 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Amet_2790 0e4bf80d441fd4fefb0608a1cb85e784 200 SUPERFAMILY SSF52540 3 189 1.4E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4005 ce3b8ce66a3c51efbe4920d608230f90 520 SUPERFAMILY SSF53041 28 177 1.96E-37 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_4005 ce3b8ce66a3c51efbe4920d608230f90 520 Pfam PF13408 Recombinase zinc beta ribbon domain 328 387 7.4E-11 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_4005 ce3b8ce66a3c51efbe4920d608230f90 520 SMART SM00857 29 178 4.2E-51 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_4005 ce3b8ce66a3c51efbe4920d608230f90 520 Gene3D G3DSA:3.40.50.1390 22 160 2.1E-54 T 12-10-2018 Amet_4005 ce3b8ce66a3c51efbe4920d608230f90 520 Pfam PF07508 Recombinase 200 307 8.0E-25 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_4005 ce3b8ce66a3c51efbe4920d608230f90 520 Gene3D G3DSA:1.10.10.2600 163 310 3.4E-20 T 12-10-2018 IPR038109 DNA-binding recombinase domain superfamily Amet_4005 ce3b8ce66a3c51efbe4920d608230f90 520 Pfam PF00239 Resolvase, N terminal domain 29 177 1.2E-35 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 393 59.589 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 Gene3D G3DSA:3.30.300.10 11 280 7.6E-181 T 12-10-2018 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 Pfam PF02772 S-adenosylmethionine synthetase, central domain 125 241 1.8E-49 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 SUPERFAMILY SSF55973 120 242 2.94E-53 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 243 382 4.8E-70 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 SUPERFAMILY SSF55973 243 390 7.06E-70 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 126 136 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 269 277 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 SUPERFAMILY SSF55973 3 109 2.47E-47 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 391 6.9E-187 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 Gene3D G3DSA:3.30.300.10 102 385 7.6E-181 T 12-10-2018 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 PIRSF PIRSF000497 1 394 3.3E-176 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 Gene3D G3DSA:3.30.300.10 5 243 7.6E-181 T 12-10-2018 Amet_0716 27adde7f2c227c1f6cf502b6383d283f 394 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.3E-43 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 SMART SM00852 181 318 6.8E-32 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 188 314 2.2E-27 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 Pfam PF03453 MoeA N-terminal region (domain I and II) 23 166 1.1E-27 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 Pfam PF03454 MoeA C-terminal region (domain IV) 331 401 5.1E-13 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 SUPERFAMILY SSF53218 178 322 1.28E-34 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 Gene3D G3DSA:2.170.190.11 60 142 1.3E-75 T 12-10-2018 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 Gene3D G3DSA:2.40.340.10 328 402 4.6E-19 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 SUPERFAMILY SSF63867 330 402 7.19E-14 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 SUPERFAMILY SSF63882 14 175 3.66E-32 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 Gene3D G3DSA:3.40.980.10 176 316 1.3E-75 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 Gene3D G3DSA:3.90.105.10 37 175 1.3E-75 T 12-10-2018 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 Gene3D G3DSA:3.40.190.10 494 583 5.2E-6 T 12-10-2018 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 Pfam PF00994 Probable molybdopterin binding domain 189 316 3.6E-22 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 SUPERFAMILY SSF53850 433 591 1.41E-9 T 12-10-2018 Amet_3168 40b545bb5491f3f1ef35bca5f76018ef 641 Pfam PF12727 PBP superfamily domain 426 615 2.6E-66 T 12-10-2018 IPR024370 PBP domain Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 423 439 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 Gene3D G3DSA:3.90.480.10 50 359 1.9E-76 T 12-10-2018 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 SUPERFAMILY SSF56014 118 275 2.09E-36 T 12-10-2018 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 Gene3D G3DSA:3.30.413.10 117 289 1.9E-76 T 12-10-2018 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 SUPERFAMILY SSF55124 249 388 1.02E-6 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 SUPERFAMILY SSF55124 16 115 9.0E-28 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 118 268 3.3E-28 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 Pfam PF01206 Sulfurtransferase TusA 697 764 2.0E-12 T 12-10-2018 IPR001455 TusA-like domain Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 SUPERFAMILY SSF64307 686 765 4.19E-11 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 Gene3D G3DSA:3.30.413.10 374 544 2.8E-18 T 12-10-2018 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 SUPERFAMILY SSF56014 376 495 3.4E-17 T 12-10-2018 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 303 365 8.8E-7 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 42 109 6.6E-20 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Amet_3499 7aaf0414239b62c81a5331d0ae70ae20 766 Gene3D G3DSA:3.30.110.40 695 765 2.6E-9 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_0689 221b1b3867f5cdcd0e9c333ba168462a 425 Pfam PF06545 Protein of unknown function (DUF1116) 90 304 4.8E-101 T 12-10-2018 IPR009499 Protein of unknown function DUF1116 Amet_0689 221b1b3867f5cdcd0e9c333ba168462a 425 Gene3D G3DSA:3.90.1700.10 252 418 1.2E-75 T 12-10-2018 Amet_0689 221b1b3867f5cdcd0e9c333ba168462a 425 Gene3D G3DSA:3.90.1710.10 111 244 3.1E-82 T 12-10-2018 Amet_0689 221b1b3867f5cdcd0e9c333ba168462a 425 Gene3D G3DSA:1.10.10.660 44 110 3.1E-82 T 12-10-2018 IPR024033 Uncharacterised domain superfamily, YlbE Amet_4636 041e42db11a4500b53e7286b84fa7eca 446 PIRSF PIRSF017901 2 421 2.7E-91 T 12-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amet_4636 041e42db11a4500b53e7286b84fa7eca 446 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 44 313 2.8E-35 T 12-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Amet_4636 041e42db11a4500b53e7286b84fa7eca 446 SUPERFAMILY SSF55931 17 415 1.67E-33 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amet_4636 041e42db11a4500b53e7286b84fa7eca 446 Gene3D G3DSA:3.30.590.20 2 421 3.8E-119 T 12-10-2018 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 Gene3D G3DSA:1.10.260.30 327 445 1.4E-42 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 1.8E-21 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 Gene3D G3DSA:1.20.120.140 6 306 2.4E-129 T 12-10-2018 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 SMART SM00963 2 87 1.2E-33 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 427 2.2E-188 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 Pfam PF02978 Signal peptide binding domain 327 425 2.3E-34 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 SMART SM00962 101 296 1.6E-118 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 Gene3D G3DSA:3.40.50.300 91 285 2.4E-129 T 12-10-2018 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 444 34.636 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 SUPERFAMILY SSF52540 43 353 6.11E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 SUPERFAMILY SSF47446 327 428 3.11E-36 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 3.2E-78 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2747 03a5c991f743050e04ddb753d6b1032b 447 SMART SM00382 100 247 3.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 SUPERFAMILY SSF55785 181 253 1.02E-5 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 Pfam PF02830 V4R domain 71 131 4.9E-15 T 12-10-2018 IPR004096 4-vinyl reductase, 4VR Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 SUPERFAMILY SSF46689 540 630 4.1E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 Gene3D G3DSA:3.30.450.20 195 285 4.2E-7 T 12-10-2018 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 540 549 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 Pfam PF02954 Bacterial regulatory protein, Fis family 590 628 9.2E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 SMART SM00989 69 131 2.9E-17 T 12-10-2018 IPR004096 4-vinyl reductase, 4VR Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 413 428 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 Pfam PF00158 Sigma-54 interaction domain 329 493 2.9E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 SMART SM00382 346 490 1.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 Gene3D G3DSA:1.10.8.60 498 565 1.2E-18 T 12-10-2018 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 611 631 1.4E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 594 611 1.4E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 Gene3D G3DSA:3.40.50.300 310 497 1.5E-65 T 12-10-2018 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 SUPERFAMILY SSF111126 25 130 4.71E-25 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 Gene3D G3DSA:1.10.10.60 575 632 1.2E-15 T 12-10-2018 Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 SUPERFAMILY SSF52540 330 570 6.55E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3766 3d305409d658baf59e7f9d46f50e6f2e 632 Gene3D G3DSA:3.30.1380.20 4 133 4.4E-26 T 12-10-2018 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 2.4E-21 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.4E-21 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 2.4E-21 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 2.4E-21 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 Gene3D G3DSA:3.20.20.70 2 294 2.9E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 PIRSF PIRSF001365 1 292 4.4E-91 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 289 1.3E-72 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 SUPERFAMILY SSF51569 3 288 1.47E-93 T 12-10-2018 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 42.677 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 SMART SM01130 3 291 1.8E-110 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_0229 c69eb06e8ec9c392af93b9465b5d9e9d 295 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 2.3E-82 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_1586 ee26e2672273b8075c8e4556c65d02fc 261 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 9 257 1.2E-58 T 12-10-2018 IPR005226 UPF0014 family Amet_1586 ee26e2672273b8075c8e4556c65d02fc 261 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 251 8.9E-88 T 12-10-2018 IPR005226 UPF0014 family Amet_0993 23852dbb2f70d7c81cbb72608c17e493 360 Pfam PF00037 4Fe-4S binding domain 52 75 2.2E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_0993 23852dbb2f70d7c81cbb72608c17e493 360 Gene3D G3DSA:3.30.70.20 13 95 2.1E-11 T 12-10-2018 Amet_0993 23852dbb2f70d7c81cbb72608c17e493 360 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 290 301 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0993 23852dbb2f70d7c81cbb72608c17e493 360 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 258 269 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0993 23852dbb2f70d7c81cbb72608c17e493 360 Pfam PF12838 4Fe-4S dicluster domain 257 304 6.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_0993 23852dbb2f70d7c81cbb72608c17e493 360 SUPERFAMILY SSF54862 32 307 1.17E-12 T 12-10-2018 Amet_0993 23852dbb2f70d7c81cbb72608c17e493 360 Gene3D G3DSA:3.30.70.20 254 308 1.5E-10 T 12-10-2018 Amet_0993 23852dbb2f70d7c81cbb72608c17e493 360 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0020 858d8998ea5b1362c1f80d1a6f3b11d8 172 Pfam PF02829 3H domain 73 169 1.3E-32 T 12-10-2018 IPR004173 3H domain GO:0036094 Amet_0020 858d8998ea5b1362c1f80d1a6f3b11d8 172 SUPERFAMILY SSF75500 68 171 9.55E-31 T 12-10-2018 IPR035922 3H domain superfamily Amet_0020 858d8998ea5b1362c1f80d1a6f3b11d8 172 Gene3D G3DSA:1.10.10.10 1 61 2.2E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0020 858d8998ea5b1362c1f80d1a6f3b11d8 172 SUPERFAMILY SSF46785 1 61 6.03E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0020 858d8998ea5b1362c1f80d1a6f3b11d8 172 PIRSF PIRSF037847 1 172 1.7E-70 T 12-10-2018 IPR026043 Transcription repressor NadR Amet_0020 858d8998ea5b1362c1f80d1a6f3b11d8 172 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 75 170 8.0E-51 T 12-10-2018 IPR004173 3H domain GO:0036094 Amet_0020 858d8998ea5b1362c1f80d1a6f3b11d8 172 Gene3D G3DSA:3.30.1340.20 65 172 3.8E-35 T 12-10-2018 IPR035922 3H domain superfamily Amet_0020 858d8998ea5b1362c1f80d1a6f3b11d8 172 Pfam PF08279 HTH domain 6 58 1.6E-12 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Amet_0261 caaf128c77df26b5588e4c5f0a98a841 257 Gene3D G3DSA:1.20.1200.10 93 254 1.4E-5 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amet_0261 caaf128c77df26b5588e4c5f0a98a841 257 PIRSF PIRSF012294 1 257 1.5E-89 T 12-10-2018 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Amet_0261 caaf128c77df26b5588e4c5f0a98a841 257 Pfam PF01923 Cobalamin adenosyltransferase 93 249 2.5E-13 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amet_0261 caaf128c77df26b5588e4c5f0a98a841 257 SUPERFAMILY SSF89028 92 250 3.73E-9 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amet_2700 a245163a35f3f98e33b463dc357092fa 218 Pfam PF07238 PilZ domain 103 207 3.0E-16 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Amet_2700 a245163a35f3f98e33b463dc357092fa 218 Gene3D G3DSA:2.40.10.220 104 210 1.7E-10 T 12-10-2018 Amet_2700 a245163a35f3f98e33b463dc357092fa 218 SUPERFAMILY SSF141371 103 195 4.9E-7 T 12-10-2018 Amet_2700 a245163a35f3f98e33b463dc357092fa 218 Pfam PF12945 Flagellar protein YcgR 8 80 3.6E-11 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Amet_3044 60ccd1a7b4ade485b688c0e9b07094ff 433 Gene3D G3DSA:3.40.50.12160 2 136 2.2E-23 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Amet_3044 60ccd1a7b4ade485b688c0e9b07094ff 433 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 430 4.0E-138 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Amet_3044 60ccd1a7b4ade485b688c0e9b07094ff 433 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Amet_3044 60ccd1a7b4ade485b688c0e9b07094ff 433 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 419 1.9E-138 T 12-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 Amet_3044 60ccd1a7b4ade485b688c0e9b07094ff 433 Pfam PF04055 Radical SAM superfamily 148 318 8.5E-26 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3044 60ccd1a7b4ade485b688c0e9b07094ff 433 Gene3D G3DSA:3.80.30.20 140 374 5.1E-87 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_3044 60ccd1a7b4ade485b688c0e9b07094ff 433 Pfam PF00919 Uncharacterized protein family UPF0004 3 98 1.6E-26 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Amet_3044 60ccd1a7b4ade485b688c0e9b07094ff 433 SUPERFAMILY SSF102114 121 361 9.42E-57 T 12-10-2018 Amet_3044 60ccd1a7b4ade485b688c0e9b07094ff 433 SMART SM00729 142 360 2.9E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_1089 549e6dd5558f5019d1077f33b7c452ed 571 Gene3D G3DSA:3.10.50.10 452 513 2.0E-78 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily Amet_1089 549e6dd5558f5019d1077f33b7c452ed 571 SMART SM00636 242 541 4.0E-7 T 12-10-2018 IPR011583 Chitinase II GO:0008061 Amet_1089 549e6dd5558f5019d1077f33b7c452ed 571 SUPERFAMILY SSF51445 265 549 5.04E-39 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_1089 549e6dd5558f5019d1077f33b7c452ed 571 Gene3D G3DSA:3.20.20.80 264 537 2.0E-78 T 12-10-2018 Amet_1089 549e6dd5558f5019d1077f33b7c452ed 571 Pfam PF00704 Glycosyl hydrolases family 18 314 537 2.8E-19 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 SUPERFAMILY SSF55874 317 466 4.32E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 467 6.4E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 SMART SM00387 357 469 7.1E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 2.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 2.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 2.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 2.2E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 SMART SM00388 249 315 2.2E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 SUPERFAMILY SSF47384 233 309 2.75E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 Gene3D G3DSA:3.30.565.10 317 472 3.1E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 Gene3D G3DSA:1.20.1480.50 156 244 1.5E-13 T 12-10-2018 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 Gene3D G3DSA:1.10.287.130 245 315 7.5E-15 T 12-10-2018 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 SUPERFAMILY SSF158472 191 238 3.14E-10 T 12-10-2018 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 Pfam PF00672 HAMP domain 191 237 2.1E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 309 3.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_0289 20a07f60a7b0f7854afdc827b4816c4f 475 SMART SM00304 189 241 1.3E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_3427 8836971f5d518383d3f17d3febc72a42 257 Gene3D G3DSA:3.40.710.10 3 256 1.0E-84 T 12-10-2018 Amet_3427 8836971f5d518383d3f17d3febc72a42 257 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 37 48 2.7E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_3427 8836971f5d518383d3f17d3febc72a42 257 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 90 107 2.7E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_3427 8836971f5d518383d3f17d3febc72a42 257 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 117 130 2.7E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_3427 8836971f5d518383d3f17d3febc72a42 257 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 9 233 1.4E-67 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Amet_3427 8836971f5d518383d3f17d3febc72a42 257 SUPERFAMILY SSF56601 9 252 4.01E-69 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_3415 8c8eee1b7fe84de80cf9cbe1be3abcfe 484 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 481 55.049 T 12-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Amet_3415 8c8eee1b7fe84de80cf9cbe1be3abcfe 484 PIRSF PIRSF001495 1 482 9.1E-232 T 12-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Amet_3415 8c8eee1b7fe84de80cf9cbe1be3abcfe 484 Pfam PF06368 Methylaspartate mutase E chain (MutE) 42 481 8.7E-229 T 12-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Amet_3415 8c8eee1b7fe84de80cf9cbe1be3abcfe 484 Gene3D G3DSA:3.20.20.240 1 416 8.6E-182 T 12-10-2018 Amet_3415 8c8eee1b7fe84de80cf9cbe1be3abcfe 484 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 481 2.0E-241 T 12-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Amet_3415 8c8eee1b7fe84de80cf9cbe1be3abcfe 484 SUPERFAMILY SSF51703 1 482 2.35E-210 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_3415 8c8eee1b7fe84de80cf9cbe1be3abcfe 484 Gene3D G3DSA:3.90.970.10 417 482 9.0E-31 T 12-10-2018 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 Gene3D G3DSA:1.10.10.10 6 76 1.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 Gene3D G3DSA:1.20.120.530 91 225 7.2E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 SMART SM00345 12 71 2.2E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 SUPERFAMILY SSF48008 92 223 2.17E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 SMART SM00895 96 217 1.3E-20 T 12-10-2018 IPR011711 GntR, C-terminal Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 8.3E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 8.3E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 SUPERFAMILY SSF46785 5 75 4.0E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 3.5E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1263 315e73e35b71f8ea61e433ab935eeb7e 227 Pfam PF07729 FCD domain 96 217 2.9E-21 T 12-10-2018 IPR011711 GntR, C-terminal Amet_4671 c470d053b9bf78745673ab79b0a002c1 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 1.0E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_4671 c470d053b9bf78745673ab79b0a002c1 209 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amet_4671 c470d053b9bf78745673ab79b0a002c1 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 5.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_4671 c470d053b9bf78745673ab79b0a002c1 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 5.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_4671 c470d053b9bf78745673ab79b0a002c1 209 SUPERFAMILY SSF48498 88 196 1.19E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_4671 c470d053b9bf78745673ab79b0a002c1 209 SUPERFAMILY SSF46689 6 83 4.09E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4671 c470d053b9bf78745673ab79b0a002c1 209 Gene3D G3DSA:1.10.357.10 1 208 4.4E-51 T 12-10-2018 Amet_3159 5d58973ee52202f0db5f0222bfbc2edf 582 SUPERFAMILY SSF90123 7 325 9.81E-77 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_3159 5d58973ee52202f0db5f0222bfbc2edf 582 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3159 5d58973ee52202f0db5f0222bfbc2edf 582 SMART SM00382 363 555 2.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3159 5d58973ee52202f0db5f0222bfbc2edf 582 Pfam PF00005 ABC transporter 354 501 2.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3159 5d58973ee52202f0db5f0222bfbc2edf 582 SUPERFAMILY SSF52540 327 574 5.99E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3159 5d58973ee52202f0db5f0222bfbc2edf 582 Gene3D G3DSA:1.20.1560.10 1 319 1.4E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_3159 5d58973ee52202f0db5f0222bfbc2edf 582 Pfam PF00664 ABC transporter transmembrane region 19 291 1.5E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amet_3159 5d58973ee52202f0db5f0222bfbc2edf 582 Gene3D G3DSA:3.40.50.300 328 582 1.1E-87 T 12-10-2018 Amet_0973 833fb2750b6534573d932b5b335c0de9 476 Gene3D G3DSA:3.50.50.60 3 348 2.4E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0973 833fb2750b6534573d932b5b335c0de9 476 Pfam PF04324 BFD-like [2Fe-2S] binding domain 398 452 7.2E-17 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Amet_0973 833fb2750b6534573d932b5b335c0de9 476 Pfam PF01266 FAD dependent oxidoreductase 3 353 1.3E-62 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amet_0973 833fb2750b6534573d932b5b335c0de9 476 Gene3D G3DSA:3.30.9.10 86 314 2.4E-123 T 12-10-2018 Amet_0973 833fb2750b6534573d932b5b335c0de9 476 SUPERFAMILY SSF54373 219 311 4.84E-5 T 12-10-2018 Amet_0973 833fb2750b6534573d932b5b335c0de9 476 Gene3D G3DSA:1.10.10.1100 384 461 6.0E-22 T 12-10-2018 Amet_0973 833fb2750b6534573d932b5b335c0de9 476 SUPERFAMILY SSF51905 1 360 2.03E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3627 d0946802eb228fcb00a60bb214abac1a 640 Gene3D G3DSA:3.90.640.10 250 307 5.1E-42 T 12-10-2018 Amet_3627 d0946802eb228fcb00a60bb214abac1a 640 SUPERFAMILY SSF53067 15 208 2.16E-26 T 12-10-2018 Amet_3627 d0946802eb228fcb00a60bb214abac1a 640 Pfam PF14450 Cell division protein FtsA 222 351 5.0E-14 T 12-10-2018 Amet_3627 d0946802eb228fcb00a60bb214abac1a 640 Gene3D G3DSA:3.30.420.40 212 356 5.1E-42 T 12-10-2018 Amet_3627 d0946802eb228fcb00a60bb214abac1a 640 Gene3D G3DSA:3.30.1490.110 91 184 5.1E-42 T 12-10-2018 Amet_3627 d0946802eb228fcb00a60bb214abac1a 640 SUPERFAMILY SSF53067 219 386 2.8E-26 T 12-10-2018 Amet_3627 d0946802eb228fcb00a60bb214abac1a 640 SMART SM00842 15 211 1.4E-54 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Amet_3627 d0946802eb228fcb00a60bb214abac1a 640 Gene3D G3DSA:3.30.420.40 18 360 5.1E-42 T 12-10-2018 Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 136 4.7E-42 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 SUPERFAMILY SSF52540 1 1177 4.13E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 SMART SM00968 525 643 1.4E-37 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 Pfam PF06470 SMC proteins Flexible Hinge Domain 525 642 1.2E-30 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 Pfam PF02463 RecF/RecN/SMC N terminal domain 407 1177 3.4E-17 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 PIRSF PIRSF005719 1 1193 8.2E-302 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 SUPERFAMILY SSF75553 487 690 1.44E-48 T 12-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1184 0.0 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1186 22.838 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 Gene3D G3DSA:3.30.70.1620 585 672 6.6E-58 T 12-10-2018 Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 Gene3D G3DSA:3.40.50.300 924 1192 1.4E-54 T 12-10-2018 Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 Gene3D G3DSA:3.40.50.300 1 238 1.9E-59 T 12-10-2018 Amet_2750 cb10515c178ca0a14421d85afc995ce8 1194 Gene3D G3DSA:1.20.1060.20 498 685 6.6E-58 T 12-10-2018 Amet_1366 8e8c75f7057c8e968841d783410cf386 452 Pfam PF01769 Divalent cation transporter 321 443 6.4E-30 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Amet_1366 8e8c75f7057c8e968841d783410cf386 452 Pfam PF03448 MgtE intracellular N domain 34 133 2.2E-28 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Amet_1366 8e8c75f7057c8e968841d783410cf386 452 Gene3D G3DSA:1.25.60.10 2 130 5.8E-32 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily Amet_1366 8e8c75f7057c8e968841d783410cf386 452 SUPERFAMILY SSF161093 279 450 1.57E-48 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Amet_1366 8e8c75f7057c8e968841d783410cf386 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 7 451 1.0E-154 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Amet_1366 8e8c75f7057c8e968841d783410cf386 452 SUPERFAMILY SSF54631 135 273 3.16E-31 T 12-10-2018 Amet_1366 8e8c75f7057c8e968841d783410cf386 452 Pfam PF00571 CBS domain 135 192 5.4E-5 T 12-10-2018 IPR000644 CBS domain Amet_1366 8e8c75f7057c8e968841d783410cf386 452 Pfam PF00571 CBS domain 199 253 8.8E-8 T 12-10-2018 IPR000644 CBS domain Amet_1366 8e8c75f7057c8e968841d783410cf386 452 SUPERFAMILY SSF158791 6 132 1.96E-29 T 12-10-2018 Amet_1366 8e8c75f7057c8e968841d783410cf386 452 SMART SM00924 32 135 3.7E-34 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Amet_1366 8e8c75f7057c8e968841d783410cf386 452 Gene3D G3DSA:3.10.580.10 131 258 1.2E-42 T 12-10-2018 Amet_1366 8e8c75f7057c8e968841d783410cf386 452 SMART SM00116 206 254 2.9E-6 T 12-10-2018 IPR000644 CBS domain Amet_1366 8e8c75f7057c8e968841d783410cf386 452 Gene3D G3DSA:1.10.357.20 273 450 8.4E-58 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Amet_3482 72c09e70ffda95d9306e1f2bb91d87dc 561 SUPERFAMILY SSF160246 2 143 4.32E-44 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Amet_3482 72c09e70ffda95d9306e1f2bb91d87dc 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 380 394 - T 12-10-2018 IPR001482 Type II/IV secretion system protein Amet_3482 72c09e70ffda95d9306e1f2bb91d87dc 561 SUPERFAMILY SSF52540 171 555 2.17E-101 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3482 72c09e70ffda95d9306e1f2bb91d87dc 561 Gene3D G3DSA:3.30.300.160 62 143 2.5E-16 T 12-10-2018 Amet_3482 72c09e70ffda95d9306e1f2bb91d87dc 561 SMART SM00382 313 434 9.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3482 72c09e70ffda95d9306e1f2bb91d87dc 561 Gene3D G3DSA:3.40.50.300 287 559 3.1E-111 T 12-10-2018 Amet_3482 72c09e70ffda95d9306e1f2bb91d87dc 561 Gene3D G3DSA:3.30.450.90 148 285 3.5E-47 T 12-10-2018 Amet_3482 72c09e70ffda95d9306e1f2bb91d87dc 561 Pfam PF00437 Type II/IV secretion system protein 187 452 6.4E-82 T 12-10-2018 IPR001482 Type II/IV secretion system protein Amet_3482 72c09e70ffda95d9306e1f2bb91d87dc 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 145 9.9E-25 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 Gene3D G3DSA:3.30.70.1430 550 643 2.6E-261 T 12-10-2018 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 Gene3D G3DSA:1.20.1640.10 499 998 2.6E-261 T 12-10-2018 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 SUPERFAMILY SSF82866 286 485 1.83E-37 T 12-10-2018 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 SUPERFAMILY SSF82714 179 260 1.83E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 SUPERFAMILY SSF82693 133 319 1.2E-12 T 12-10-2018 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 Gene3D G3DSA:3.30.2090.10 174 265 2.6E-261 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 SUPERFAMILY SSF82866 785 1006 7.46E-48 T 12-10-2018 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 SUPERFAMILY SSF82714 698 782 1.24E-8 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 Gene3D G3DSA:1.20.1640.10 10 498 2.6E-261 T 12-10-2018 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 SUPERFAMILY SSF82693 40 126 5.76E-16 T 12-10-2018 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 Gene3D G3DSA:3.30.2090.10 695 786 2.6E-261 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 Gene3D G3DSA:3.30.70.1430 38 794 2.6E-261 T 12-10-2018 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 Pfam PF00873 AcrB/AcrD/AcrF family 1 1002 2.2E-182 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.1E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 PRINTS PR00702 Acriflavin resistance protein family signature 380 404 3.1E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 PRINTS PR00702 Acriflavin resistance protein family signature 433 456 3.1E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 PRINTS PR00702 Acriflavin resistance protein family signature 458 481 3.1E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 PRINTS PR00702 Acriflavin resistance protein family signature 352 373 3.1E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 Gene3D G3DSA:3.30.70.1320 131 322 2.6E-261 T 12-10-2018 Amet_0283 cdc288387f981828d5b4167babf26b3d 1026 Gene3D G3DSA:3.30.70.1440 644 844 2.6E-261 T 12-10-2018 Amet_3503 84102b1e03a6038409547e4e4fc55e4b 160 Gene3D G3DSA:3.90.960.10 2 158 3.2E-48 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amet_3503 84102b1e03a6038409547e4e4fc55e4b 160 Pfam PF04073 Aminoacyl-tRNA editing domain 36 147 3.1E-22 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Amet_3503 84102b1e03a6038409547e4e4fc55e4b 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 157 1.3E-53 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Amet_3503 84102b1e03a6038409547e4e4fc55e4b 160 SUPERFAMILY SSF55826 6 153 6.93E-38 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amet_3503 84102b1e03a6038409547e4e4fc55e4b 160 PIRSF PIRSF006181 2 160 4.9E-57 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Amet_0172 adbbb8fd04c47ba90596c42eff4766a5 138 SMART SM00316 4 74 1.7E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_0172 adbbb8fd04c47ba90596c42eff4766a5 138 Gene3D G3DSA:2.40.50.140 2 84 4.6E-28 T 12-10-2018 Amet_0172 adbbb8fd04c47ba90596c42eff4766a5 138 SUPERFAMILY SSF50249 4 81 2.26E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_0172 adbbb8fd04c47ba90596c42eff4766a5 138 Pfam PF00575 S1 RNA binding domain 4 74 4.7E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 207 397 1.1E-86 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 3.2E-85 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 Pfam PF00925 GTP cyclohydrolase II 208 372 2.2E-76 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 PIRSF PIRSF001259 2 403 5.1E-186 T 12-10-2018 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 3 395 55.159 T 12-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 SUPERFAMILY SSF55821 4 203 2.22E-85 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 SUPERFAMILY SSF142695 204 376 1.7E-74 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 Gene3D G3DSA:3.90.870.10 1 205 2.6E-89 T 12-10-2018 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 204 399 43.659 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 Gene3D G3DSA:3.40.50.10990 206 376 7.0E-79 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 203 38.848 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1020 5a884beeb648f762d0df3bb78cba984b 403 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 2.3E-77 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 SUPERFAMILY SSF82693 564 663 6.8E-12 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 Gene3D G3DSA:3.30.70.1430 565 668 0.0 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 2.9E-43 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.9E-43 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 2.9E-43 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 2.9E-43 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 2.9E-43 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 2.9E-43 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.9E-43 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 Gene3D G3DSA:3.30.2090.10 719 807 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 SUPERFAMILY SSF82693 137 320 9.42E-14 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 SUPERFAMILY SSF82714 182 263 4.97E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 Gene3D G3DSA:3.30.70.1440 669 864 0.0 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 Gene3D G3DSA:1.20.1640.10 511 1021 0.0 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 Gene3D G3DSA:3.30.2090.10 177 267 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 SUPERFAMILY SSF82693 41 134 7.85E-24 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 SUPERFAMILY SSF82866 288 488 1.57E-40 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 Gene3D G3DSA:3.30.70.1320 134 323 0.0 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 Gene3D G3DSA:3.30.70.1430 40 815 0.0 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 Gene3D G3DSA:1.20.1640.10 10 510 0.0 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 Pfam PF00873 AcrB/AcrD/AcrF family 4 1024 6.4E-256 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 SUPERFAMILY SSF82866 806 1026 1.23E-50 T 12-10-2018 Amet_1522 978c0fef7d0cdb2e3010625e26555436 1041 SUPERFAMILY SSF82714 721 804 8.89E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_2346 ceaf0714f2a749c324fab8b17c62fdf1 458 SUPERFAMILY SSF102114 90 411 3.4E-58 T 12-10-2018 Amet_2346 ceaf0714f2a749c324fab8b17c62fdf1 458 TIGRFAM TIGR03974 rSAM_six_Cys: SCIFF radical SAM maturase 2 445 2.9E-215 T 12-10-2018 IPR024025 SCIFF radical SAM maturase Amet_2346 ceaf0714f2a749c324fab8b17c62fdf1 458 Pfam PF04055 Radical SAM superfamily 99 244 1.7E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_2346 ceaf0714f2a749c324fab8b17c62fdf1 458 Pfam PF13353 4Fe-4S single cluster domain 95 215 6.5E-13 T 12-10-2018 Amet_2346 ceaf0714f2a749c324fab8b17c62fdf1 458 Gene3D G3DSA:3.20.20.70 89 449 2.5E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2346 ceaf0714f2a749c324fab8b17c62fdf1 458 Pfam PF13186 Iron-sulfur cluster-binding domain 342 402 8.9E-9 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Amet_2346 ceaf0714f2a749c324fab8b17c62fdf1 458 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 342 427 6.2E-21 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Amet_2346 ceaf0714f2a749c324fab8b17c62fdf1 458 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 98 109 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_4109 030796b167254ad32ae97dd2463e334b 122 Gene3D G3DSA:3.40.30.10 25 120 8.0E-19 T 12-10-2018 Amet_4109 030796b167254ad32ae97dd2463e334b 122 SUPERFAMILY SSF52833 28 118 1.1E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_1007 47f2363e76373ef8406c15845892b806 171 SUPERFAMILY SSF55811 18 140 7.85E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amet_1007 47f2363e76373ef8406c15845892b806 171 Gene3D G3DSA:3.90.79.10 11 149 7.3E-25 T 12-10-2018 Amet_1007 47f2363e76373ef8406c15845892b806 171 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amet_1007 47f2363e76373ef8406c15845892b806 171 Pfam PF00293 NUDIX domain 23 141 1.6E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amet_1902 bb15255256e5c21adc79843a341ce6bb 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 149 6.5E-11 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_1902 bb15255256e5c21adc79843a341ce6bb 210 SUPERFAMILY SSF51161 43 203 1.8E-45 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_1902 bb15255256e5c21adc79843a341ce6bb 210 Gene3D G3DSA:2.160.10.10 1 208 2.0E-73 T 12-10-2018 Amet_1902 bb15255256e5c21adc79843a341ce6bb 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 Pfam PF00154 recA bacterial DNA recombination protein 5 266 2.2E-146 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 Gene3D G3DSA:3.40.50.300 24 265 1.5E-83 T 12-10-2018 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 Gene3D G3DSA:3.30.250.10 266 341 4.4E-26 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 SMART SM00382 55 226 1.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 Hamap MF_00268 Protein RecA [recA]. 3 327 53.334 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 SUPERFAMILY SSF52540 4 265 2.67E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 ProSitePatterns PS00321 recA signature. 211 219 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 2 322 2.7E-177 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 SUPERFAMILY SSF54752 266 323 6.02E-21 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 PRINTS PR00142 RecA protein signature 208 236 7.3E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 PRINTS PR00142 RecA protein signature 91 120 7.3E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 PRINTS PR00142 RecA protein signature 241 270 7.3E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 PRINTS PR00142 RecA protein signature 163 192 7.3E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 PRINTS PR00142 RecA protein signature 125 154 7.3E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amet_2658 6952abfe946a3e653dffb19b229e92ef 347 PRINTS PR00142 RecA protein signature 295 312 7.3E-86 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 184 316 1.5E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 SUPERFAMILY SSF52540 142 394 2.12E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 Gene3D G3DSA:3.40.50.300 440 678 1.6E-91 T 12-10-2018 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 Gene3D G3DSA:1.10.8.60 324 410 2.8E-27 T 12-10-2018 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 Gene3D G3DSA:1.10.8.60 680 771 7.2E-30 T 12-10-2018 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 543 561 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 680 760 4.5E-28 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 SMART SM01086 680 769 1.2E-35 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 SMART SM00382 179 325 1.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 SMART SM00382 509 681 1.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 Pfam PF07724 AAA domain (Cdc48 subfamily) 511 674 2.1E-52 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 620 634 7.7E-39 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 558 576 7.7E-39 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 587 605 7.7E-39 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 513 531 7.7E-39 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 Gene3D G3DSA:3.40.50.300 129 323 9.3E-63 T 12-10-2018 Amet_2822 7ad6c2ec4a879e46a604dc11940a61f3 771 SUPERFAMILY SSF52540 459 767 3.81E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2258 2e6ea1f684f238c5545964a8988e43c4 190 Pfam PF13302 Acetyltransferase (GNAT) domain 16 154 3.2E-19 T 12-10-2018 IPR000182 GNAT domain Amet_2258 2e6ea1f684f238c5545964a8988e43c4 190 Gene3D G3DSA:3.40.630.30 6 190 8.9E-36 T 12-10-2018 Amet_2258 2e6ea1f684f238c5545964a8988e43c4 190 SUPERFAMILY SSF55729 11 178 4.18E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 191 2.0E-42 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 Hamap MF_00551 Uridine kinase [udk]. 1 205 40.452 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 TIGRFAM TIGR00235 udk: uridine kinase 4 204 2.5E-83 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 Gene3D G3DSA:3.40.50.300 2 208 1.1E-66 T 12-10-2018 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 PRINTS PR00988 Uridine kinase signature 34 45 2.4E-35 T 12-10-2018 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 PRINTS PR00988 Uridine kinase signature 79 94 2.4E-35 T 12-10-2018 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 PRINTS PR00988 Uridine kinase signature 4 21 2.4E-35 T 12-10-2018 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 PRINTS PR00988 Uridine kinase signature 149 160 2.4E-35 T 12-10-2018 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 PRINTS PR00988 Uridine kinase signature 135 145 2.4E-35 T 12-10-2018 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 PRINTS PR00988 Uridine kinase signature 171 184 2.4E-35 T 12-10-2018 Amet_2472 6e4ca0dbc521d6f86b3cf5aa0685fe65 208 SUPERFAMILY SSF52540 2 196 1.49E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1604 25f74f88ef6829ee6b45a286c9e4fe06 184 Pfam PF00665 Integrase core domain 107 181 1.5E-17 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_1604 25f74f88ef6829ee6b45a286c9e4fe06 184 Gene3D G3DSA:3.30.420.10 96 184 2.6E-15 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_1604 25f74f88ef6829ee6b45a286c9e4fe06 184 SUPERFAMILY SSF53098 107 181 9.41E-22 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1604 25f74f88ef6829ee6b45a286c9e4fe06 184 Pfam PF13276 HTH-like domain 33 83 1.6E-10 T 12-10-2018 IPR025948 HTH-like domain Amet_0321 38a69a10c8461e7128ce79f4e86b3c2c 332 PIRSF PIRSF004532 1 326 5.7E-146 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amet_0321 38a69a10c8461e7128ce79f4e86b3c2c 332 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 322 1.7E-125 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amet_0321 38a69a10c8461e7128ce79f4e86b3c2c 332 Gene3D G3DSA:3.40.190.90 123 289 7.1E-135 T 12-10-2018 Amet_0321 38a69a10c8461e7128ce79f4e86b3c2c 332 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 315 2.6E-143 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amet_0321 38a69a10c8461e7128ce79f4e86b3c2c 332 SUPERFAMILY SSF56655 1 319 2.2E-106 T 12-10-2018 Amet_0321 38a69a10c8461e7128ce79f4e86b3c2c 332 Gene3D G3DSA:3.30.540.10 5 315 7.1E-135 T 12-10-2018 Amet_4180 091b619aa0e95e34568a278e14e612c1 203 SUPERFAMILY SSF47240 13 154 1.79E-31 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_4180 091b619aa0e95e34568a278e14e612c1 203 SUPERFAMILY SSF57802 162 193 6.89E-8 T 12-10-2018 Amet_4180 091b619aa0e95e34568a278e14e612c1 203 Gene3D G3DSA:1.20.1260.10 13 156 1.8E-40 T 12-10-2018 IPR012347 Ferritin-like Amet_4180 091b619aa0e95e34568a278e14e612c1 203 Pfam PF02915 Rubrerythrin 21 147 5.1E-23 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Amet_4180 091b619aa0e95e34568a278e14e612c1 203 Gene3D G3DSA:2.20.28.10 157 194 3.0E-10 T 12-10-2018 Amet_2655 9b8e932b1753ef9a5175156909480ba8 276 SUPERFAMILY SSF89550 1 263 1.83E-47 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amet_2655 9b8e932b1753ef9a5175156909480ba8 276 Gene3D G3DSA:1.10.150.650 98 170 4.3E-85 T 12-10-2018 Amet_2655 9b8e932b1753ef9a5175156909480ba8 276 Pfam PF02811 PHP domain 6 171 2.9E-9 T 12-10-2018 IPR004013 PHP domain GO:0003824 Amet_2655 9b8e932b1753ef9a5175156909480ba8 276 SMART SM00481 4 70 3.2E-18 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Amet_2655 9b8e932b1753ef9a5175156909480ba8 276 Gene3D G3DSA:3.20.20.140 4 246 4.3E-85 T 12-10-2018 Amet_1220 f74a267f209ca7e1f0858ef5248b0632 278 SUPERFAMILY SSF50249 137 207 3.35E-8 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_1220 f74a267f209ca7e1f0858ef5248b0632 278 PIRSF PIRSF012524 1 272 1.6E-64 T 12-10-2018 IPR014464 Conserved virulence factor B Amet_1220 f74a267f209ca7e1f0858ef5248b0632 278 Pfam PF13509 S1 domain 66 125 1.8E-6 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain Amet_1220 f74a267f209ca7e1f0858ef5248b0632 278 Pfam PF13509 S1 domain 5 59 4.6E-12 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain Amet_1220 f74a267f209ca7e1f0858ef5248b0632 278 SMART SM00316 138 201 1.5E-4 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_1220 f74a267f209ca7e1f0858ef5248b0632 278 SMART SM00316 65 126 11.0 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_1220 f74a267f209ca7e1f0858ef5248b0632 278 Gene3D G3DSA:2.40.50.140 141 208 1.1E-12 T 12-10-2018 Amet_1220 f74a267f209ca7e1f0858ef5248b0632 278 Gene3D G3DSA:1.10.10.10 209 271 1.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0660 525b41491b2a08320e0ae12d006f3aac 407 SUPERFAMILY SSF53187 24 405 1.1E-56 T 12-10-2018 Amet_0660 525b41491b2a08320e0ae12d006f3aac 407 Pfam PF01546 Peptidase family M20/M25/M40 89 401 4.8E-34 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_0660 525b41491b2a08320e0ae12d006f3aac 407 Gene3D G3DSA:3.30.70.360 193 321 6.2E-93 T 12-10-2018 Amet_0660 525b41491b2a08320e0ae12d006f3aac 407 SUPERFAMILY SSF55031 193 306 5.1E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_0660 525b41491b2a08320e0ae12d006f3aac 407 Gene3D G3DSA:3.40.630.10 40 403 6.2E-93 T 12-10-2018 Amet_0660 525b41491b2a08320e0ae12d006f3aac 407 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 26 396 5.8E-80 T 12-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase Amet_0660 525b41491b2a08320e0ae12d006f3aac 407 Pfam PF07687 Peptidase dimerisation domain 190 296 4.6E-22 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Amet_2745 a894458fda8824f28a4063d4d0c97295 76 Hamap MF_00088 UPF0109 protein . 1 75 23.124 T 12-10-2018 IPR020627 Uncharacterised protein family UPF0109 Amet_2745 a894458fda8824f28a4063d4d0c97295 76 Gene3D G3DSA:3.30.300.20 4 73 1.2E-5 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Amet_2745 a894458fda8824f28a4063d4d0c97295 76 SUPERFAMILY SSF54814 5 61 1.83E-8 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amet_2745 a894458fda8824f28a4063d4d0c97295 76 Pfam PF13083 KH domain 4 74 2.2E-23 T 12-10-2018 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 Pfam PF01411 tRNA synthetases class II (A) 21 570 2.0E-198 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 SUPERFAMILY SSF101353 257 476 1.96E-64 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 891 170.368 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 668 711 2.0E-18 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 21 870 3.2E-302 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 Gene3D G3DSA:3.10.310.40 779 889 1.1E-33 T 12-10-2018 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 SUPERFAMILY SSF50447 468 567 1.52E-16 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 Gene3D G3DSA:3.30.54.20 639 692 6.6E-49 T 12-10-2018 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 SUPERFAMILY SSF55186 567 724 1.11E-48 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 Gene3D G3DSA:3.30.980.10 577 712 6.6E-49 T 12-10-2018 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 Gene3D G3DSA:2.40.30.130 472 567 1.1E-10 T 12-10-2018 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 SMART SM00863 668 711 1.3E-20 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 237 250 2.6E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 210 221 2.6E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 287 303 2.6E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 311 324 2.6E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 86 97 2.6E-28 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 Gene3D G3DSA:3.30.930.10 17 253 5.7E-97 T 12-10-2018 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 SUPERFAMILY SSF55681 17 256 1.32E-92 T 12-10-2018 Amet_2458 84d6456bb198ebb24a39741eb23f0027 893 Pfam PF02272 DHHA1 domain 747 885 1.1E-25 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Amet_1581 4fabd5e181dce11290373a6ebd730d71 226 SUPERFAMILY SSF47413 3 63 9.57E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_1581 4fabd5e181dce11290373a6ebd730d71 226 Pfam PF01381 Helix-turn-helix 8 57 7.2E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1581 4fabd5e181dce11290373a6ebd730d71 226 Gene3D G3DSA:2.10.109.10 115 224 2.3E-9 T 12-10-2018 Amet_1581 4fabd5e181dce11290373a6ebd730d71 226 SUPERFAMILY SSF51306 133 222 5.58E-11 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amet_1581 4fabd5e181dce11290373a6ebd730d71 226 Gene3D G3DSA:1.10.260.40 2 89 5.8E-10 T 12-10-2018 Amet_1581 4fabd5e181dce11290373a6ebd730d71 226 SMART SM00530 7 62 3.1E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1877 84e9875cbae87fd52f11d668b71c1d49 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 311 3.3E-39 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1877 84e9875cbae87fd52f11d668b71c1d49 315 SUPERFAMILY SSF161098 90 294 9.65E-21 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1877 84e9875cbae87fd52f11d668b71c1d49 315 Gene3D G3DSA:1.10.3720.10 86 306 1.5E-24 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0209 48430fc24c86fe8dfc8709589476a5de 382 Pfam PF13439 Glycosyltransferase Family 4 24 187 2.1E-17 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amet_0209 48430fc24c86fe8dfc8709589476a5de 382 Pfam PF00534 Glycosyl transferases group 1 195 343 1.2E-30 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Amet_0209 48430fc24c86fe8dfc8709589476a5de 382 Gene3D G3DSA:3.40.50.2000 194 376 1.7E-40 T 12-10-2018 Amet_0209 48430fc24c86fe8dfc8709589476a5de 382 SUPERFAMILY SSF53756 6 377 2.38E-68 T 12-10-2018 Amet_0209 48430fc24c86fe8dfc8709589476a5de 382 Gene3D G3DSA:3.40.50.2000 18 193 2.7E-25 T 12-10-2018 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 Pfam PF02954 Bacterial regulatory protein, Fis family 583 623 1.1E-15 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 409 424 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 Pfam PF00158 Sigma-54 interaction domain 322 489 1.8E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 SMART SM00382 342 487 6.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 SUPERFAMILY SSF55785 184 298 4.38E-11 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 307 4.9E-6 T 12-10-2018 IPR000014 PAS domain Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 SUPERFAMILY SSF55781 41 181 1.62E-5 T 12-10-2018 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 Gene3D G3DSA:1.10.8.60 494 559 2.2E-19 T 12-10-2018 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 Pfam PF01590 GAF domain 71 178 1.2E-5 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 Pfam PF00989 PAS fold 197 300 3.2E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 SUPERFAMILY SSF46689 536 626 5.63E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 SUPERFAMILY SSF52540 322 550 3.42E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 Gene3D G3DSA:3.30.450.40 1 181 3.1E-54 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 346 359 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 Gene3D G3DSA:3.30.450.20 205 310 2.7E-17 T 12-10-2018 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 Gene3D G3DSA:1.10.10.60 580 626 1.2E-18 T 12-10-2018 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 Gene3D G3DSA:3.40.50.300 311 493 1.4E-66 T 12-10-2018 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 589 606 4.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4644 20a41a2827f19af4b6358f46b95d3c25 645 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 606 626 4.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_0562 5084c9421dbe0ba46447f9985fbfc23f 188 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 14 186 4.8E-65 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 Amet_0562 5084c9421dbe0ba46447f9985fbfc23f 188 PIRSF PIRSF016897 3 188 1.3E-69 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 Amet_0562 5084c9421dbe0ba46447f9985fbfc23f 188 SUPERFAMILY SSF110391 13 187 9.94E-59 T 12-10-2018 IPR035928 GlpP-like superfamily Amet_0562 5084c9421dbe0ba46447f9985fbfc23f 188 Gene3D G3DSA:3.20.20.400 5 188 6.3E-68 T 12-10-2018 IPR035928 GlpP-like superfamily Amet_4266 cb37bdb111d14517c6b5f7dc6e2d5f28 111 SUPERFAMILY SSF55248 16 108 1.02E-29 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Amet_4266 cb37bdb111d14517c6b5f7dc6e2d5f28 111 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 107 2.1E-28 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Amet_4266 cb37bdb111d14517c6b5f7dc6e2d5f28 111 Gene3D G3DSA:3.30.1360.20 18 111 1.6E-30 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Amet_4266 cb37bdb111d14517c6b5f7dc6e2d5f28 111 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 109 21.658 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Amet_1722 be1b25b6fc22472983d5bd2d71b9e6ef 587 SUPERFAMILY SSF102114 155 377 3.4E-44 T 12-10-2018 Amet_1722 be1b25b6fc22472983d5bd2d71b9e6ef 587 Gene3D G3DSA:3.80.30.20 172 361 4.7E-22 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_1722 be1b25b6fc22472983d5bd2d71b9e6ef 587 Gene3D G3DSA:3.40.50.280 14 134 1.7E-8 T 12-10-2018 Amet_1722 be1b25b6fc22472983d5bd2d71b9e6ef 587 Pfam PF13311 Protein of unknown function (DUF4080) 370 566 4.9E-56 T 12-10-2018 IPR025288 Domain of unknown function DUF4080 Amet_1722 be1b25b6fc22472983d5bd2d71b9e6ef 587 SUPERFAMILY SSF52242 40 134 2.55E-7 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_1722 be1b25b6fc22472983d5bd2d71b9e6ef 587 SMART SM00729 175 387 1.8E-22 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_1722 be1b25b6fc22472983d5bd2d71b9e6ef 587 Pfam PF02310 B12 binding domain 6 123 8.2E-21 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_1722 be1b25b6fc22472983d5bd2d71b9e6ef 587 Pfam PF04055 Radical SAM superfamily 180 341 2.0E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_4627 27fc4c90941096120747b4186a6fc9d1 352 Gene3D G3DSA:2.40.50.140 282 340 1.4E-11 T 12-10-2018 Amet_4627 27fc4c90941096120747b4186a6fc9d1 352 SUPERFAMILY SSF52540 4 243 2.79E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4627 27fc4c90941096120747b4186a6fc9d1 352 SMART SM00382 30 213 5.8E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4627 27fc4c90941096120747b4186a6fc9d1 352 Pfam PF00005 ABC transporter 22 162 1.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4627 27fc4c90941096120747b4186a6fc9d1 352 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4627 27fc4c90941096120747b4186a6fc9d1 352 Gene3D G3DSA:3.40.50.300 3 222 3.6E-60 T 12-10-2018 Amet_4627 27fc4c90941096120747b4186a6fc9d1 352 Gene3D G3DSA:2.40.50.940 223 345 1.4E-11 T 12-10-2018 Amet_4627 27fc4c90941096120747b4186a6fc9d1 352 Pfam PF08402 TOBE domain 275 342 2.5E-6 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amet_4627 27fc4c90941096120747b4186a6fc9d1 352 SUPERFAMILY SSF50331 238 344 1.59E-11 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amet_1326 6384cf38e2eb64e606462f80a2b779a7 251 SMART SM00382 29 241 2.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1326 6384cf38e2eb64e606462f80a2b779a7 251 SUPERFAMILY SSF52540 3 243 3.95E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1326 6384cf38e2eb64e606462f80a2b779a7 251 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 3 245 5.2E-95 T 12-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 Amet_1326 6384cf38e2eb64e606462f80a2b779a7 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1326 6384cf38e2eb64e606462f80a2b779a7 251 Gene3D G3DSA:3.40.50.300 2 248 4.5E-63 T 12-10-2018 Amet_1326 6384cf38e2eb64e606462f80a2b779a7 251 Pfam PF00005 ABC transporter 20 175 2.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2878 e2a7dbd796cb099b83336086f8918e70 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 417 41.998 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_2878 e2a7dbd796cb099b83336086f8918e70 417 SUPERFAMILY SSF55205 2 415 7.98E-132 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Amet_2878 e2a7dbd796cb099b83336086f8918e70 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 2.5E-163 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_2878 e2a7dbd796cb099b83336086f8918e70 417 Gene3D G3DSA:3.65.10.10 22 229 7.1E-164 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amet_2878 e2a7dbd796cb099b83336086f8918e70 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 407 5.3E-98 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Amet_2878 e2a7dbd796cb099b83336086f8918e70 417 Gene3D G3DSA:3.65.10.10 7 414 7.1E-164 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amet_3381 b15d0d871fc47ea298d4b4236f087574 316 PIRSF PIRSF000728 10 284 3.2E-111 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amet_3381 b15d0d871fc47ea298d4b4236f087574 316 Hamap MF_00082 Acetylglutamate kinase [argB]. 24 277 48.894 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amet_3381 b15d0d871fc47ea298d4b4236f087574 316 SUPERFAMILY SSF53633 3 284 4.45E-91 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_3381 b15d0d871fc47ea298d4b4236f087574 316 Pfam PF00696 Amino acid kinase family 26 261 6.8E-49 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amet_3381 b15d0d871fc47ea298d4b4236f087574 316 Gene3D G3DSA:3.40.1160.10 2 291 1.6E-98 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_3381 b15d0d871fc47ea298d4b4236f087574 316 PRINTS PR00474 Glutamate 5-kinase family signature 234 254 6.2E-6 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_3381 b15d0d871fc47ea298d4b4236f087574 316 PRINTS PR00474 Glutamate 5-kinase family signature 149 170 6.2E-6 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_3381 b15d0d871fc47ea298d4b4236f087574 316 PRINTS PR00474 Glutamate 5-kinase family signature 181 208 6.2E-6 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_3381 b15d0d871fc47ea298d4b4236f087574 316 TIGRFAM TIGR00761 argB: acetylglutamate kinase 27 259 7.6E-81 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amet_4776 c4ec3201dc3000a34a4f70713c99900f 444 Gene3D G3DSA:3.40.50.300 233 442 1.0E-69 T 12-10-2018 Amet_4776 c4ec3201dc3000a34a4f70713c99900f 444 SMART SM00670 3 133 6.7E-16 T 12-10-2018 IPR002716 PIN domain Amet_4776 c4ec3201dc3000a34a4f70713c99900f 444 Gene3D G3DSA:3.40.50.1010 1 147 3.8E-21 T 12-10-2018 Amet_4776 c4ec3201dc3000a34a4f70713c99900f 444 SUPERFAMILY SSF52540 137 423 6.75E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4776 c4ec3201dc3000a34a4f70713c99900f 444 Pfam PF13638 PIN domain 5 145 6.7E-33 T 12-10-2018 IPR002716 PIN domain Amet_4776 c4ec3201dc3000a34a4f70713c99900f 444 SUPERFAMILY SSF88723 3 148 2.94E-9 T 12-10-2018 IPR029060 PIN-like domain superfamily Amet_4776 c4ec3201dc3000a34a4f70713c99900f 444 Pfam PF02562 PhoH-like protein 235 439 1.2E-55 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 Amet_4586 23bc2b441fe631ef98effdcf13ea40d3 302 Pfam PF02971 Formiminotransferase domain 186 286 4.4E-15 T 12-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4586 23bc2b441fe631ef98effdcf13ea40d3 302 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 6 301 2.2E-95 T 12-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4586 23bc2b441fe631ef98effdcf13ea40d3 302 SMART SM01222 6 183 4.1E-88 T 12-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_4586 23bc2b441fe631ef98effdcf13ea40d3 302 Gene3D G3DSA:3.30.990.10 5 183 6.3E-56 T 12-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_4586 23bc2b441fe631ef98effdcf13ea40d3 302 SUPERFAMILY SSF55116 186 301 8.11E-39 T 12-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_4586 23bc2b441fe631ef98effdcf13ea40d3 302 SMART SM01221 185 299 2.8E-58 T 12-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4586 23bc2b441fe631ef98effdcf13ea40d3 302 Gene3D G3DSA:3.30.70.670 186 302 4.9E-27 T 12-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4586 23bc2b441fe631ef98effdcf13ea40d3 302 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 8 181 4.9E-62 T 12-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_4586 23bc2b441fe631ef98effdcf13ea40d3 302 SUPERFAMILY SSF55116 6 181 1.2E-58 T 12-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_3286 76df0219166c9d58c0e866261688e5d4 395 TIGRFAM TIGR00277 HDIG: HDIG domain 24 110 5.8E-10 T 12-10-2018 IPR006675 HDIG domain Amet_3286 76df0219166c9d58c0e866261688e5d4 395 Pfam PF01966 HD domain 233 352 2.3E-13 T 12-10-2018 IPR006674 HD domain Amet_3286 76df0219166c9d58c0e866261688e5d4 395 Pfam PF01966 HD domain 24 139 2.1E-18 T 12-10-2018 IPR006674 HD domain Amet_3286 76df0219166c9d58c0e866261688e5d4 395 Gene3D G3DSA:1.10.3210.10 4 185 9.2E-35 T 12-10-2018 Amet_3286 76df0219166c9d58c0e866261688e5d4 395 Gene3D G3DSA:1.10.3210.10 214 395 3.8E-48 T 12-10-2018 Amet_3286 76df0219166c9d58c0e866261688e5d4 395 SUPERFAMILY SSF109604 15 179 1.84E-21 T 12-10-2018 Amet_3286 76df0219166c9d58c0e866261688e5d4 395 SUPERFAMILY SSF109604 219 391 1.23E-26 T 12-10-2018 Amet_3286 76df0219166c9d58c0e866261688e5d4 395 SMART SM00471 19 150 8.9E-4 T 12-10-2018 IPR003607 HD/PDEase domain Amet_3286 76df0219166c9d58c0e866261688e5d4 395 SMART SM00471 227 362 4.7E-6 T 12-10-2018 IPR003607 HD/PDEase domain Amet_2163 731fdb5460492225557e4a886b3d8092 161 SUPERFAMILY SSF55083 1 153 3.4E-51 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amet_2163 731fdb5460492225557e4a886b3d8092 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 6.9E-38 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amet_2163 731fdb5460492225557e4a886b3d8092 161 Gene3D G3DSA:3.30.70.560 1 158 3.4E-52 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amet_2163 731fdb5460492225557e4a886b3d8092 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 132 3.1E-43 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amet_2163 731fdb5460492225557e4a886b3d8092 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 SUPERFAMILY SSF46955 3 106 9.16E-30 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.5E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.5E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.5E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 Gene3D G3DSA:1.10.490.50 163 253 5.2E-26 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 SMART SM00422 3 72 3.6E-27 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 Pfam PF07739 TipAS antibiotic-recognition domain 135 249 5.2E-37 T 12-10-2018 IPR012925 TipAS antibiotic-recognition domain Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 Gene3D G3DSA:1.10.1660.10 1 144 9.9E-43 T 12-10-2018 Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 Pfam PF13411 MerR HTH family regulatory protein 3 70 9.6E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_2931 d9c77b6e1430c66263ce2863443b4398 254 SUPERFAMILY SSF89082 163 251 5.75E-28 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Amet_3307 e7793db0f75876ecaa8cee94cee53c1c 231 Gene3D G3DSA:3.40.50.2300 1 129 7.3E-34 T 12-10-2018 Amet_3307 e7793db0f75876ecaa8cee94cee53c1c 231 Pfam PF00072 Response regulator receiver domain 8 116 4.4E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3307 e7793db0f75876ecaa8cee94cee53c1c 231 SMART SM00448 5 115 1.3E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3307 e7793db0f75876ecaa8cee94cee53c1c 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 1.0E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3307 e7793db0f75876ecaa8cee94cee53c1c 231 SUPERFAMILY SSF52172 4 186 1.9E-36 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3307 e7793db0f75876ecaa8cee94cee53c1c 231 SMART SM00862 152 228 1.3E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3307 e7793db0f75876ecaa8cee94cee53c1c 231 Gene3D G3DSA:1.10.10.10 130 231 3.0E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1742 349d111529f15c8f780c71825b1d2cd3 39 Pfam PF09388 Spo0E like sporulation regulatory protein 1 35 2.1E-13 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 Amet_1742 349d111529f15c8f780c71825b1d2cd3 39 SUPERFAMILY SSF140500 2 37 1.31E-8 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SUPERFAMILY SSF52540 804 1012 1.39E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SUPERFAMILY SSF143517 1010 1165 1.31E-35 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SUPERFAMILY SSF52540 545 805 1.33E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Pfam PF03461 TRCF domain 1026 1119 3.1E-27 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Pfam PF02559 CarD-like/TRCF domain 502 597 3.2E-30 T 12-10-2018 IPR003711 CarD-like/TRCF domain Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SMART SM00490 848 932 4.8E-17 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SMART SM00487 622 812 5.4E-34 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Gene3D G3DSA:3.90.1150.50 1021 1173 4.2E-35 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Pfam PF00270 DEAD/DEAH box helicase 627 786 7.5E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 29 1159 27.831 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Gene3D G3DSA:3.30.2060.10 141 226 7.1E-68 T 12-10-2018 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Pfam PF00271 Helicase conserved C-terminal domain 824 931 1.1E-15 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 159 1098 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SUPERFAMILY SSF52540 380 491 1.74E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SMART SM01058 501 598 6.6E-46 T 12-10-2018 IPR003711 CarD-like/TRCF domain Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Gene3D G3DSA:2.30.30.840 505 563 1.1E-241 T 12-10-2018 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SMART SM00982 1025 1126 2.4E-35 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SUPERFAMILY SSF141259 494 570 1.44E-23 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Gene3D G3DSA:3.40.50.300 564 803 1.1E-241 T 12-10-2018 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Gene3D G3DSA:3.40.50.11180 45 354 7.1E-68 T 12-10-2018 Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 SUPERFAMILY SSF52540 16 372 6.91E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0160 2e2bdb3a50825674de90c939c801cd4e 1174 Gene3D G3DSA:3.40.50.300 501 1012 1.1E-241 T 12-10-2018 Amet_4611 80f88d29896e07285979f8a842b24aed 476 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 299 469 4.8E-45 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_4611 80f88d29896e07285979f8a842b24aed 476 SMART SM00646 359 469 1.2E-24 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_4611 80f88d29896e07285979f8a842b24aed 476 Pfam PF08486 Stage II sporulation protein 24 118 1.1E-8 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Amet_4611 80f88d29896e07285979f8a842b24aed 476 SUPERFAMILY SSF53187 297 473 6.91E-47 T 12-10-2018 Amet_4611 80f88d29896e07285979f8a842b24aed 476 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 24 284 1.0E-39 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Amet_4611 80f88d29896e07285979f8a842b24aed 476 Gene3D G3DSA:3.40.630.40 295 475 9.5E-51 T 12-10-2018 Amet_4560 9b44e3aad11c18a656226847acf6811f 449 Pfam PF03063 Prismane/CO dehydrogenase family 22 100 2.7E-16 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Amet_4560 9b44e3aad11c18a656226847acf6811f 449 Pfam PF03063 Prismane/CO dehydrogenase family 101 435 3.6E-102 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Amet_4560 9b44e3aad11c18a656226847acf6811f 449 SUPERFAMILY SSF56821 21 438 1.67E-148 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Amet_4560 9b44e3aad11c18a656226847acf6811f 449 Gene3D G3DSA:3.40.50.2030 278 449 4.9E-57 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_4560 9b44e3aad11c18a656226847acf6811f 449 Hamap MF_00069 Hydroxylamine reductase [hcp]. 22 449 16.51 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Amet_4560 9b44e3aad11c18a656226847acf6811f 449 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 44 449 3.1E-169 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Amet_4560 9b44e3aad11c18a656226847acf6811f 449 Gene3D G3DSA:1.20.1270.20 43 127 1.2E-29 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_4560 9b44e3aad11c18a656226847acf6811f 449 Gene3D G3DSA:3.40.50.2030 134 277 1.3E-59 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_2798 7e18a7cdd8e767999608766fe4dae8e2 224 SUPERFAMILY SSF109635 1 89 6.54E-13 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily Amet_2798 7e18a7cdd8e767999608766fe4dae8e2 224 Gene3D G3DSA:1.20.120.910 1 122 1.2E-27 T 12-10-2018 Amet_2798 7e18a7cdd8e767999608766fe4dae8e2 224 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 5 167 1.7E-47 T 12-10-2018 IPR014240 Regulatory protein, YteA family Amet_2798 7e18a7cdd8e767999608766fe4dae8e2 224 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 88 118 3.3E-9 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Amet_4738 3b8ca06347982b0595ad3da582fc00e6 370 SMART SM00382 29 217 2.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4738 3b8ca06347982b0595ad3da582fc00e6 370 Gene3D G3DSA:2.40.50.100 240 367 8.3E-32 T 12-10-2018 Amet_4738 3b8ca06347982b0595ad3da582fc00e6 370 Gene3D G3DSA:3.40.50.300 1 239 2.4E-72 T 12-10-2018 Amet_4738 3b8ca06347982b0595ad3da582fc00e6 370 Gene3D G3DSA:2.40.50.140 307 352 8.3E-32 T 12-10-2018 Amet_4738 3b8ca06347982b0595ad3da582fc00e6 370 SUPERFAMILY SSF50331 237 368 5.35E-28 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amet_4738 3b8ca06347982b0595ad3da582fc00e6 370 SUPERFAMILY SSF52540 4 245 3.02E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4738 3b8ca06347982b0595ad3da582fc00e6 370 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4738 3b8ca06347982b0595ad3da582fc00e6 370 Pfam PF08402 TOBE domain 286 360 3.4E-10 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amet_4738 3b8ca06347982b0595ad3da582fc00e6 370 Pfam PF00005 ABC transporter 22 162 3.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4781 df749b244c62a9e5a4388def0e3e7415 559 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.3E-47 T 12-10-2018 Amet_4781 df749b244c62a9e5a4388def0e3e7415 559 SMART SM00382 37 179 1.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4781 df749b244c62a9e5a4388def0e3e7415 559 Gene3D G3DSA:1.20.272.10 246 366 1.9E-11 T 12-10-2018 Amet_4781 df749b244c62a9e5a4388def0e3e7415 559 Gene3D G3DSA:3.40.50.300 13 177 2.1E-106 T 12-10-2018 Amet_4781 df749b244c62a9e5a4388def0e3e7415 559 SUPERFAMILY SSF52540 33 224 1.02E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4781 df749b244c62a9e5a4388def0e3e7415 559 Gene3D G3DSA:1.10.8.60 8 239 2.1E-106 T 12-10-2018 Amet_4781 df749b244c62a9e5a4388def0e3e7415 559 SUPERFAMILY SSF48019 244 359 2.64E-19 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Amet_4781 df749b244c62a9e5a4388def0e3e7415 559 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 361 2.5E-14 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Amet_4781 df749b244c62a9e5a4388def0e3e7415 559 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 359 1.4E-143 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Amet_1608 529acdc1a9dfc65e65d6c3cc2a29653c 408 Gene3D G3DSA:3.90.220.20 9 205 4.4E-31 T 12-10-2018 Amet_1608 529acdc1a9dfc65e65d6c3cc2a29653c 408 Gene3D G3DSA:3.90.220.20 217 407 1.4E-27 T 12-10-2018 Amet_1608 529acdc1a9dfc65e65d6c3cc2a29653c 408 Pfam PF01420 Type I restriction modification DNA specificity domain 222 396 1.5E-13 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Amet_1608 529acdc1a9dfc65e65d6c3cc2a29653c 408 Pfam PF01420 Type I restriction modification DNA specificity domain 20 193 3.3E-18 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Amet_1608 529acdc1a9dfc65e65d6c3cc2a29653c 408 SUPERFAMILY SSF116734 6 204 2.13E-37 T 12-10-2018 Amet_1608 529acdc1a9dfc65e65d6c3cc2a29653c 408 SUPERFAMILY SSF116734 210 407 1.32E-35 T 12-10-2018 Amet_3366 5de628649bc8845cc3b6ee072e53b2c3 187 SUPERFAMILY SSF55729 8 181 6.3E-49 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_3366 5de628649bc8845cc3b6ee072e53b2c3 187 Pfam PF13302 Acetyltransferase (GNAT) domain 16 155 4.5E-29 T 12-10-2018 IPR000182 GNAT domain Amet_3366 5de628649bc8845cc3b6ee072e53b2c3 187 Gene3D G3DSA:3.40.630.30 10 186 1.7E-46 T 12-10-2018 Amet_3923 3e22793f72fb086a4dec324189b63f74 250 Gene3D G3DSA:1.10.10.60 137 246 3.4E-12 T 12-10-2018 Amet_3923 3e22793f72fb086a4dec324189b63f74 250 SMART SM00342 161 241 1.4E-4 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3923 3e22793f72fb086a4dec324189b63f74 250 Pfam PF12833 Helix-turn-helix domain 167 238 1.7E-10 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3800 4b9a701d0bb4d8a599323367a1d5f35d 349 SUPERFAMILY SSF74650 10 348 2.01E-114 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Amet_3800 4b9a701d0bb4d8a599323367a1d5f35d 349 Pfam PF01263 Aldose 1-epimerase 20 347 7.5E-91 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Amet_3800 4b9a701d0bb4d8a599323367a1d5f35d 349 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 175 184 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Amet_3800 4b9a701d0bb4d8a599323367a1d5f35d 349 PIRSF PIRSF005096 3 349 1.7E-129 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Amet_3800 4b9a701d0bb4d8a599323367a1d5f35d 349 Gene3D G3DSA:2.70.98.10 8 349 3.9E-124 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Amet_3694 9cb4109719ff647a5d934cf6386982c4 315 Pfam PF00892 EamA-like transporter family 8 140 3.4E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_3694 9cb4109719ff647a5d934cf6386982c4 315 Pfam PF00892 EamA-like transporter family 153 295 3.0E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_3694 9cb4109719ff647a5d934cf6386982c4 315 SUPERFAMILY SSF103481 214 300 5.1E-11 T 12-10-2018 Amet_3694 9cb4109719ff647a5d934cf6386982c4 315 SUPERFAMILY SSF103481 43 141 6.93E-12 T 12-10-2018 Amet_3775 961d2b39ac528454928336012b141cd3 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3775 961d2b39ac528454928336012b141cd3 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3775 961d2b39ac528454928336012b141cd3 333 Pfam PF12833 Helix-turn-helix domain 253 331 2.2E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3775 961d2b39ac528454928336012b141cd3 333 SUPERFAMILY SSF46689 284 332 1.61E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3775 961d2b39ac528454928336012b141cd3 333 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 284 326 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_3775 961d2b39ac528454928336012b141cd3 333 Gene3D G3DSA:1.10.10.60 281 333 1.5E-16 T 12-10-2018 Amet_3775 961d2b39ac528454928336012b141cd3 333 Gene3D G3DSA:1.10.10.60 231 280 5.2E-6 T 12-10-2018 Amet_3775 961d2b39ac528454928336012b141cd3 333 SMART SM00342 247 330 2.9E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_4172 1247e44f2073c143bddcbbc145c16fc3 220 Pfam PF00005 ABC transporter 22 171 6.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4172 1247e44f2073c143bddcbbc145c16fc3 220 SMART SM00382 31 215 1.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4172 1247e44f2073c143bddcbbc145c16fc3 220 Gene3D G3DSA:3.40.50.300 1 220 2.1E-56 T 12-10-2018 Amet_4172 1247e44f2073c143bddcbbc145c16fc3 220 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4172 1247e44f2073c143bddcbbc145c16fc3 220 SUPERFAMILY SSF52540 2 217 5.03E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 Gene3D G3DSA:3.80.30.20 143 377 1.5E-90 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 Pfam PF00919 Uncharacterized protein family UPF0004 5 102 7.7E-29 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 3 440 68.489 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 Pfam PF04055 Radical SAM superfamily 150 321 3.3E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 SMART SM00729 145 363 8.3E-60 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 5 439 1.7E-107 T 12-10-2018 Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 Pfam PF01938 TRAM domain 375 439 6.2E-6 T 12-10-2018 IPR002792 TRAM domain Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 Gene3D G3DSA:2.40.50.140 378 446 1.3E-19 T 12-10-2018 Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 438 2.8E-164 T 12-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 438 2.9E-144 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 Gene3D G3DSA:3.40.50.12160 3 130 1.2E-41 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Amet_2660 ee3cfcc3ff266c04d29661e0414e9fa3 446 SUPERFAMILY SSF102114 129 369 2.35E-62 T 12-10-2018 Amet_0811 1831777f55999237485f4fad68b2a60f 214 SUPERFAMILY SSF51735 87 207 4.13E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0811 1831777f55999237485f4fad68b2a60f 214 Gene3D G3DSA:3.40.50.720 79 214 2.8E-46 T 12-10-2018 Amet_0811 1831777f55999237485f4fad68b2a60f 214 Gene3D G3DSA:1.10.10.10 2 78 2.5E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0811 1831777f55999237485f4fad68b2a60f 214 Pfam PF02629 CoA binding domain 86 180 2.5E-21 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Amet_0811 1831777f55999237485f4fad68b2a60f 214 SMART SM00881 81 182 4.5E-17 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Amet_0811 1831777f55999237485f4fad68b2a60f 214 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 6.8E-20 T 12-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 Amet_0811 1831777f55999237485f4fad68b2a60f 214 SUPERFAMILY SSF46785 11 81 2.38E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0811 1831777f55999237485f4fad68b2a60f 214 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 211 35.391 T 12-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 Amet_1894 5e4fc3575374ec7800ba95fc01f63978 248 SUPERFAMILY SSF46894 71 119 3.4E-7 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_1894 5e4fc3575374ec7800ba95fc01f63978 248 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 179 247 7.2E-27 T 12-10-2018 IPR018656 Domain of unknown function DUF2087 Amet_1894 5e4fc3575374ec7800ba95fc01f63978 248 Gene3D G3DSA:1.10.10.10 65 131 2.9E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3932 2951e8dfeef1ea9a2474680d86ec52e7 268 Hamap MF_00548 Zinc transporter ZupT [zupT]. 6 268 34.4 T 12-10-2018 IPR023498 Zinc transporter ZupT Amet_3932 2951e8dfeef1ea9a2474680d86ec52e7 268 Pfam PF02535 ZIP Zinc transporter 107 262 1.4E-25 T 12-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Amet_4798 7862114d754c83ffb1767250c25b1939 207 Gene3D G3DSA:3.30.300.20 58 141 1.9E-27 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Amet_4798 7862114d754c83ffb1767250c25b1939 207 SMART SM01245 5 57 2.4E-24 T 12-10-2018 IPR032782 Jag, N-terminal Amet_4798 7862114d754c83ffb1767250c25b1939 207 SUPERFAMILY SSF54814 63 127 8.37E-5 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amet_4798 7862114d754c83ffb1767250c25b1939 207 SMART SM00393 127 206 2.2E-21 T 12-10-2018 IPR001374 R3H domain GO:0003676 Amet_4798 7862114d754c83ffb1767250c25b1939 207 Pfam PF13083 KH domain 62 132 7.2E-20 T 12-10-2018 Amet_4798 7862114d754c83ffb1767250c25b1939 207 Gene3D G3DSA:3.30.1370.50 142 207 2.2E-30 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 Amet_4798 7862114d754c83ffb1767250c25b1939 207 Pfam PF14804 Jag N-terminus 8 56 5.4E-21 T 12-10-2018 IPR032782 Jag, N-terminal Amet_4798 7862114d754c83ffb1767250c25b1939 207 SUPERFAMILY SSF82708 158 204 5.89E-7 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 Amet_4798 7862114d754c83ffb1767250c25b1939 207 Pfam PF01424 R3H domain 145 204 2.1E-16 T 12-10-2018 IPR001374 R3H domain GO:0003676 Amet_4798 7862114d754c83ffb1767250c25b1939 207 Gene3D G3DSA:3.30.30.80 1 56 8.5E-18 T 12-10-2018 IPR038247 Jag, N-terminal domain superfamily Amet_0665 4874f3c9274e73034833c0a51cf31d1d 629 TIGRFAM TIGR04480 D_pro_red_PrdA: D-proline reductase (dithiol), PrdA proprotein 4 598 5.3E-299 T 12-10-2018 IPR031002 D-proline reductase, PrdA proprotein GO:0050002|GO:0055114 KEGG: 00330+1.21.4.1 Amet_0665 4874f3c9274e73034833c0a51cf31d1d 629 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 179 520 1.2E-24 T 12-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Amet_4106 bc2c644b7b20dafc7e56d21809f6ce10 81 SUPERFAMILY SSF55021 3 78 1.01E-25 T 12-10-2018 Amet_4106 bc2c644b7b20dafc7e56d21809f6ce10 81 Gene3D G3DSA:3.30.70.1150 1 81 2.3E-34 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Amet_4106 bc2c644b7b20dafc7e56d21809f6ce10 81 TIGRFAM TIGR03959 hyd_TM1266: putative iron-only hydrogenase system regulator 4 78 9.8E-36 T 12-10-2018 IPR023860 [FeFe]-hydrogenase system regulator TM1266 Amet_2178 109b8e9a7941c0b5bb4d7c3e1476aed2 218 SUPERFAMILY SSF109998 30 176 9.81E-21 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Amet_2178 109b8e9a7941c0b5bb4d7c3e1476aed2 218 Gene3D G3DSA:1.10.4030.30 18 217 4.4E-22 T 12-10-2018 Amet_2178 109b8e9a7941c0b5bb4d7c3e1476aed2 218 Pfam PF13624 SurA N-terminal domain 6 149 9.9E-20 T 12-10-2018 Amet_2190 8a5015dd5dfb16d370c056b7ea75e07d 554 Pfam PF09706 CRISPR-associated protein (Cas_CXXC_CXXC) 223 285 1.5E-23 T 12-10-2018 IPR019121 CRISPR-associated protein, CXXC-CXXC domain Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 SUPERFAMILY SSF52172 285 407 7.26E-33 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 Gene3D G3DSA:1.20.120.160 423 529 7.2E-16 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 Gene3D G3DSA:3.30.565.10 89 252 6.2E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 Gene3D G3DSA:1.10.287.130 2 86 6.4E-19 T 12-10-2018 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 SMART SM00387 135 249 6.2E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 Pfam PF00072 Response regulator receiver domain 286 399 6.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 176 190 3.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 194 204 3.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 209 227 3.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 PRINTS PR00344 Bacterial sensor protein C-terminal signature 233 246 3.6E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 SUPERFAMILY SSF55874 77 247 1.44E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 SUPERFAMILY SSF47226 382 509 7.2E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 SMART SM00388 23 88 6.3E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 Pfam PF00512 His Kinase A (phospho-acceptor) domain 25 86 1.8E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 SUPERFAMILY SSF47384 17 87 6.08E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 SMART SM00448 284 399 2.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 Pfam PF01627 Hpt domain 448 507 4.8E-8 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 Gene3D G3DSA:3.40.50.2300 264 411 9.1E-36 T 12-10-2018 Amet_1013 fa93d26e15b65fed0d20a90a3de5ccf6 542 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 135 248 1.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2898 0d7f1c8a65db69029fc8dcc85f95033f 192 PIRSF PIRSF010130 1 192 7.0E-83 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Amet_2898 0d7f1c8a65db69029fc8dcc85f95033f 192 Pfam PF06130 Phosphate propanoyltransferase 115 181 1.6E-17 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Amet_2898 0d7f1c8a65db69029fc8dcc85f95033f 192 Pfam PF06130 Phosphate propanoyltransferase 7 86 6.1E-29 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 Gene3D G3DSA:2.40.100.10 46 227 4.1E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 100 117 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 SUPERFAMILY SSF50891 64 219 1.75E-54 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 79 94 3.5E-21 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 178 193 3.5E-21 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 117 3.5E-21 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 165 3.5E-21 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 165 177 3.5E-21 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 67 218 1.2E-51 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_1282 1847e2c9cdd60eab211a80b25cc175b8 232 PIRSF PIRSF001467 51 223 5.1E-42 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Amet_4274 bfe3aed46d499a94d95accfe62f38f62 364 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 352 6.3E-89 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amet_4274 bfe3aed46d499a94d95accfe62f38f62 364 SMART SM01329 7 352 1.3E-162 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amet_4274 bfe3aed46d499a94d95accfe62f38f62 364 Gene3D G3DSA:3.40.718.10 2 360 9.2E-130 T 12-10-2018 Amet_4274 bfe3aed46d499a94d95accfe62f38f62 364 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 3 355 1.2E-151 T 12-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 Amet_4274 bfe3aed46d499a94d95accfe62f38f62 364 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Amet_4274 bfe3aed46d499a94d95accfe62f38f62 364 SUPERFAMILY SSF53659 2 356 1.77E-112 T 12-10-2018 Amet_3350 14b0df752aefb88841e12bd49ef5a807 549 Gene3D G3DSA:3.40.50.300 207 406 1.9E-49 T 12-10-2018 Amet_3350 14b0df752aefb88841e12bd49ef5a807 549 SMART SM00490 255 336 6.7E-32 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_3350 14b0df752aefb88841e12bd49ef5a807 549 Pfam PF00270 DEAD/DEAH box helicase 27 192 2.3E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amet_3350 14b0df752aefb88841e12bd49ef5a807 549 Gene3D G3DSA:3.40.50.300 1 206 2.1E-76 T 12-10-2018 Amet_3350 14b0df752aefb88841e12bd49ef5a807 549 Pfam PF00271 Helicase conserved C-terminal domain 230 336 7.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_3350 14b0df752aefb88841e12bd49ef5a807 549 SMART SM00487 22 219 1.5E-59 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_3350 14b0df752aefb88841e12bd49ef5a807 549 SUPERFAMILY SSF52540 72 357 1.85E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1176 4858da91a96514d9ded392388014cb25 62 Gene3D G3DSA:1.10.3910.10 2 62 6.8E-27 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Amet_1176 4858da91a96514d9ded392388014cb25 62 SUPERFAMILY SSF140683 1 62 9.02E-19 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Amet_1176 4858da91a96514d9ded392388014cb25 62 Pfam PF08984 Domain of unknown function (DUF1858) 4 56 2.7E-23 T 12-10-2018 IPR015077 Domain of unknown function DUF1858 Amet_1176 4858da91a96514d9ded392388014cb25 62 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 4 61 1.0E-28 T 12-10-2018 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide Amet_4122 4867d5bfc284c998d6d349c04e736ce2 309 Gene3D G3DSA:3.40.1390.20 3 129 1.7E-40 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Amet_4122 4867d5bfc284c998d6d349c04e736ce2 309 Pfam PF02603 HPr Serine kinase N terminus 4 127 3.2E-42 T 12-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Amet_4122 4867d5bfc284c998d6d349c04e736ce2 309 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 41.39 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 Amet_4122 4867d5bfc284c998d6d349c04e736ce2 309 SUPERFAMILY SSF53795 132 298 1.8E-40 T 12-10-2018 Amet_4122 4867d5bfc284c998d6d349c04e736ce2 309 Gene3D G3DSA:3.40.50.300 130 309 1.6E-73 T 12-10-2018 Amet_4122 4867d5bfc284c998d6d349c04e736ce2 309 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 2.4E-74 T 12-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 Amet_4122 4867d5bfc284c998d6d349c04e736ce2 309 SUPERFAMILY SSF75138 1 131 1.44E-35 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Amet_4122 4867d5bfc284c998d6d349c04e736ce2 309 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 4 302 8.8E-119 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 Amet_0549 e9f07fc28772e00a8266138d2a50c4ce 259 Gene3D G3DSA:1.10.575.10 51 259 7.1E-31 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 Amet_0549 e9f07fc28772e00a8266138d2a50c4ce 259 SUPERFAMILY SSF48537 49 257 8.11E-42 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 Amet_0549 e9f07fc28772e00a8266138d2a50c4ce 259 SMART SM00770 15 259 5.1E-36 T 12-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 Amet_0549 e9f07fc28772e00a8266138d2a50c4ce 259 Pfam PF00882 Zinc dependent phospholipase C 57 188 1.0E-16 T 12-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 Amet_0549 e9f07fc28772e00a8266138d2a50c4ce 259 ProDom PD003946 PHOSPHOLIPASE C PLCB HYDROLASE PRECURSOR PHOSPHATIDYLCHOLINE SIGNAL CHOLINEPHOSPHOHYDROLASE TOXIN PLC 103 211 5.0E-9 T 12-10-2018 IPR001531 Zinc-dependent phospholipase C GO:0004629|GO:0008270 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3|MetaCyc: PWY-7782|MetaCyc: PWY-7783 Amet_2616 876b2402cf1039051d41f536343cc567 566 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Amet_2616 876b2402cf1039051d41f536343cc567 566 Gene3D G3DSA:3.40.50.1390 1 135 9.4E-41 T 12-10-2018 Amet_2616 876b2402cf1039051d41f536343cc567 566 Pfam PF07508 Recombinase 174 275 1.2E-26 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_2616 876b2402cf1039051d41f536343cc567 566 Pfam PF00239 Resolvase, N terminal domain 4 150 1.4E-36 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_2616 876b2402cf1039051d41f536343cc567 566 Gene3D G3DSA:1.10.10.2600 136 277 3.4E-24 T 12-10-2018 IPR038109 DNA-binding recombinase domain superfamily Amet_2616 876b2402cf1039051d41f536343cc567 566 SMART SM00857 4 152 2.8E-52 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_2616 876b2402cf1039051d41f536343cc567 566 Pfam PF13408 Recombinase zinc beta ribbon domain 292 354 4.5E-6 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_2616 876b2402cf1039051d41f536343cc567 566 SUPERFAMILY SSF53041 3 152 1.7E-38 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_4495 641859af5a3026dffdde6ae963805bab 213 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 14 209 3.3E-114 T 12-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_4495 641859af5a3026dffdde6ae963805bab 213 SUPERFAMILY SSF88946 17 104 3.4E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4495 641859af5a3026dffdde6ae963805bab 213 Pfam PF08281 Sigma-70, region 4 169 204 3.9E-8 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_4495 641859af5a3026dffdde6ae963805bab 213 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 59 72 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_4495 641859af5a3026dffdde6ae963805bab 213 Pfam PF04542 Sigma-70 region 2 35 104 6.4E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4495 641859af5a3026dffdde6ae963805bab 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_4495 641859af5a3026dffdde6ae963805bab 213 SUPERFAMILY SSF88659 122 210 1.05E-9 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_4495 641859af5a3026dffdde6ae963805bab 213 PIRSF PIRSF002939 3 213 3.8E-110 T 12-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 Amet_4495 641859af5a3026dffdde6ae963805bab 213 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 208 3.9E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_3241 ac2504ab4683446604591f666bbc4e36 318 Pfam PF04055 Radical SAM superfamily 61 215 5.7E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3241 ac2504ab4683446604591f666bbc4e36 318 SMART SM00876 228 318 1.2E-32 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_3241 ac2504ab4683446604591f666bbc4e36 318 PIRSF PIRSF001619 1 318 7.7E-105 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_3241 ac2504ab4683446604591f666bbc4e36 318 Gene3D G3DSA:3.20.20.70 15 318 4.4E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3241 ac2504ab4683446604591f666bbc4e36 318 SUPERFAMILY SSF102114 14 317 5.36E-68 T 12-10-2018 Amet_3241 ac2504ab4683446604591f666bbc4e36 318 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 228 316 1.0E-15 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_3241 ac2504ab4683446604591f666bbc4e36 318 Hamap MF_01694 Biotin synthase [bioB]. 14 318 38.765 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_3241 ac2504ab4683446604591f666bbc4e36 318 TIGRFAM TIGR00433 bioB: biotin synthase 27 316 5.7E-118 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_3241 ac2504ab4683446604591f666bbc4e36 318 SMART SM00729 52 257 2.3E-26 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_4543 f5bf82e2998817620047a8421508a53e 689 SMART SM00382 197 336 4.0E-24 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4543 f5bf82e2998817620047a8421508a53e 689 SUPERFAMILY SSF140990 415 609 2.75E-72 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Amet_4543 f5bf82e2998817620047a8421508a53e 689 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 332 1.9E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_4543 f5bf82e2998817620047a8421508a53e 689 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Amet_4543 f5bf82e2998817620047a8421508a53e 689 Gene3D G3DSA:1.20.58.760 415 615 1.9E-73 T 12-10-2018 Amet_4543 f5bf82e2998817620047a8421508a53e 689 Gene3D G3DSA:1.10.8.60 335 412 2.0E-29 T 12-10-2018 Amet_4543 f5bf82e2998817620047a8421508a53e 689 SUPERFAMILY SSF52540 160 404 1.5E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4543 f5bf82e2998817620047a8421508a53e 689 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 115 604 5.0E-233 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Amet_4543 f5bf82e2998817620047a8421508a53e 689 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 639 37.27 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Amet_4543 f5bf82e2998817620047a8421508a53e 689 Gene3D G3DSA:3.40.50.300 151 333 9.6E-69 T 12-10-2018 Amet_4543 f5bf82e2998817620047a8421508a53e 689 Pfam PF01434 Peptidase family M41 395 602 1.9E-78 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Amet_3026 0f4466d906441a832bf08e662c3baea5 295 Gene3D G3DSA:3.40.50.300 2 182 6.5E-48 T 12-10-2018 Amet_3026 0f4466d906441a832bf08e662c3baea5 295 Pfam PF01926 50S ribosome-binding GTPase 8 122 7.4E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_3026 0f4466d906441a832bf08e662c3baea5 295 SUPERFAMILY SSF54814 179 295 3.6E-42 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Amet_3026 0f4466d906441a832bf08e662c3baea5 295 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 165 8.0E-30 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_3026 0f4466d906441a832bf08e662c3baea5 295 SUPERFAMILY SSF52540 8 201 2.14E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3026 0f4466d906441a832bf08e662c3baea5 295 Gene3D G3DSA:3.30.300.20 183 295 1.3E-43 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Amet_3026 0f4466d906441a832bf08e662c3baea5 295 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 277 4.5E-94 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3026 0f4466d906441a832bf08e662c3baea5 295 Pfam PF07650 KH domain 205 283 1.8E-20 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_3026 0f4466d906441a832bf08e662c3baea5 295 Hamap MF_00367 GTPase Era [era]. 3 294 38.512 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1193 2a8f413f8544db32f7fe092ee88fe4a9 281 Pfam PF09339 IclR helix-turn-helix domain 17 67 7.0E-11 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amet_1193 2a8f413f8544db32f7fe092ee88fe4a9 281 Gene3D G3DSA:3.30.450.40 89 265 2.4E-48 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_1193 2a8f413f8544db32f7fe092ee88fe4a9 281 SUPERFAMILY SSF55781 74 261 5.76E-43 T 12-10-2018 Amet_1193 2a8f413f8544db32f7fe092ee88fe4a9 281 Pfam PF01614 Bacterial transcriptional regulator 135 257 3.5E-31 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amet_1193 2a8f413f8544db32f7fe092ee88fe4a9 281 SUPERFAMILY SSF46785 14 88 9.93E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1193 2a8f413f8544db32f7fe092ee88fe4a9 281 SMART SM00346 14 106 5.7E-16 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amet_1193 2a8f413f8544db32f7fe092ee88fe4a9 281 Gene3D G3DSA:1.10.10.10 13 88 7.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0869 dc86ac845d0b6ea8c0d56cff206b2ac5 144 Gene3D G3DSA:2.70.40.10 1 143 8.5E-56 T 12-10-2018 IPR036157 dUTPase-like superfamily Amet_0869 dc86ac845d0b6ea8c0d56cff206b2ac5 144 SUPERFAMILY SSF51283 3 143 3.27E-50 T 12-10-2018 IPR036157 dUTPase-like superfamily Amet_0869 dc86ac845d0b6ea8c0d56cff206b2ac5 144 Pfam PF00692 dUTPase 13 142 7.6E-31 T 12-10-2018 IPR029054 dUTPase-like Amet_0869 dc86ac845d0b6ea8c0d56cff206b2ac5 144 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 2 143 30.62 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Amet_0869 dc86ac845d0b6ea8c0d56cff206b2ac5 144 TIGRFAM TIGR00576 dut: dUTP diphosphatase 4 142 4.4E-55 T 12-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 Gene3D G3DSA:3.40.50.670 402 635 9.1E-106 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR00418 DNA topoisomerase II family signature 271 284 2.9E-71 T 12-10-2018 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR00418 DNA topoisomerase II family signature 567 583 2.9E-71 T 12-10-2018 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR00418 DNA topoisomerase II family signature 489 505 2.9E-71 T 12-10-2018 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR00418 DNA topoisomerase II family signature 37 52 2.9E-71 T 12-10-2018 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR00418 DNA topoisomerase II family signature 423 437 2.9E-71 T 12-10-2018 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR00418 DNA topoisomerase II family signature 72 85 2.9E-71 T 12-10-2018 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR00418 DNA topoisomerase II family signature 507 524 2.9E-71 T 12-10-2018 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR00418 DNA topoisomerase II family signature 527 539 2.9E-71 T 12-10-2018 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR00418 DNA topoisomerase II family signature 115 129 2.9E-71 T 12-10-2018 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 SMART SM00433 37 628 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 Gene3D G3DSA:3.30.230.10 223 401 3.1E-73 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 Pfam PF01751 Toprim domain 422 533 4.9E-17 T 12-10-2018 IPR006171 TOPRIM domain Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 176 2.1E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 SUPERFAMILY SSF54211 224 394 7.78E-60 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 635 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 635 92.9 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 ProSitePatterns PS00177 DNA topoisomerase II signature. 425 433 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 SMART SM00387 33 177 1.5E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 8 18 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 588 600 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 315 331 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 473 482 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 223 245 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 363 377 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 604 620 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 PRINTS PR01159 DNA gyrase subunit B signature 377 397 1.5E-73 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 Gene3D G3DSA:3.30.565.10 5 222 4.2E-91 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 SUPERFAMILY SSF56719 397 626 5.49E-88 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 SUPERFAMILY SSF55874 8 214 5.5E-72 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 Pfam PF00204 DNA gyrase B 224 393 7.0E-63 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_0006 ac9c7d6c274e938e750535caa2cc798c 635 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 564 624 7.2E-31 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 PRINTS PR00162 Rieske 2Fe-2S subunit signature 486 498 1.1E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 PRINTS PR00162 Rieske 2Fe-2S subunit signature 465 476 1.1E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 PRINTS PR00162 Rieske 2Fe-2S subunit signature 498 510 1.1E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 SUPERFAMILY SSF51905 38 394 1.94E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 Gene3D G3DSA:3.30.9.10 134 346 1.6E-42 T 12-10-2018 Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 Pfam PF00355 Rieske [2Fe-2S] domain 432 513 1.1E-14 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 Gene3D G3DSA:3.50.50.60 41 388 1.6E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 SUPERFAMILY SSF50022 432 512 9.82E-26 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 Gene3D G3DSA:2.102.10.10 425 514 5.2E-25 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Amet_4663 7f66477fb1d92e8b5934fcc19deadf3a 514 Pfam PF01266 FAD dependent oxidoreductase 41 386 1.4E-40 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Amet_0905 504a4999fb43b0290ab7d4b46c77aece 94 Pfam PF07875 Coat F domain 10 71 5.1E-25 T 12-10-2018 IPR012851 Spore coat protein CotF-like Amet_3647 c279c742d1497bf73aeb43d2b2768a45 177 Gene3D G3DSA:2.10.109.10 32 164 1.8E-34 T 12-10-2018 Amet_3647 c279c742d1497bf73aeb43d2b2768a45 177 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 124 143 6.0E-19 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3647 c279c742d1497bf73aeb43d2b2768a45 177 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 92 6.0E-19 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3647 c279c742d1497bf73aeb43d2b2768a45 177 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 6.0E-19 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3647 c279c742d1497bf73aeb43d2b2768a45 177 Pfam PF00717 Peptidase S24-like 31 104 4.0E-14 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amet_3647 c279c742d1497bf73aeb43d2b2768a45 177 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 8 167 4.9E-46 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3647 c279c742d1497bf73aeb43d2b2768a45 177 SUPERFAMILY SSF51306 24 172 2.41E-44 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amet_3647 c279c742d1497bf73aeb43d2b2768a45 177 ProSitePatterns PS00760 Signal peptidases I lysine active site. 82 94 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Amet_4566 42baf678c4369d6521c68afeda29f7c9 259 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 17 249 7.6E-44 T 12-10-2018 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC Amet_0114 91258517b4bc953b9ee3aed498cc2361 251 SUPERFAMILY SSF143422 1 129 3.66E-24 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0114 91258517b4bc953b9ee3aed498cc2361 251 SMART SM01321 9 123 5.6E-37 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_0114 91258517b4bc953b9ee3aed498cc2361 251 Gene3D G3DSA:3.30.70.1290 1 168 2.4E-45 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0114 91258517b4bc953b9ee3aed498cc2361 251 Pfam PF01797 Transposase IS200 like 13 123 3.8E-15 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_1873 1a15ff3182a261a4c1cf6d49e787b295 141 Pfam PF01047 MarR family 29 86 7.9E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1873 1a15ff3182a261a4c1cf6d49e787b295 141 SMART SM00347 22 122 3.2E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1873 1a15ff3182a261a4c1cf6d49e787b295 141 SUPERFAMILY SSF46785 23 135 3.33E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1873 1a15ff3182a261a4c1cf6d49e787b295 141 Gene3D G3DSA:1.10.10.10 2 137 3.6E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4406 aff3505a694f1a89d72281eb51a84d66 416 SUPERFAMILY SSF54631 193 328 3.03E-33 T 12-10-2018 Amet_4406 aff3505a694f1a89d72281eb51a84d66 416 SUPERFAMILY SSF56176 337 415 4.64E-19 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_4406 aff3505a694f1a89d72281eb51a84d66 416 Gene3D G3DSA:3.30.465.10 333 416 3.5E-22 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_4406 aff3505a694f1a89d72281eb51a84d66 416 SMART SM01091 340 416 6.0E-18 T 12-10-2018 IPR005170 Transporter-associated domain Amet_4406 aff3505a694f1a89d72281eb51a84d66 416 Pfam PF01595 Domain of unknown function DUF21 11 191 5.3E-54 T 12-10-2018 IPR002550 CNNM, transmembrane domain Amet_4406 aff3505a694f1a89d72281eb51a84d66 416 Gene3D G3DSA:3.10.580.10 186 332 4.1E-54 T 12-10-2018 Amet_4406 aff3505a694f1a89d72281eb51a84d66 416 Pfam PF00571 CBS domain 207 260 1.7E-5 T 12-10-2018 IPR000644 CBS domain Amet_4406 aff3505a694f1a89d72281eb51a84d66 416 Pfam PF00571 CBS domain 274 325 3.0E-5 T 12-10-2018 IPR000644 CBS domain Amet_4406 aff3505a694f1a89d72281eb51a84d66 416 Pfam PF03471 Transporter associated domain 341 414 4.0E-19 T 12-10-2018 IPR005170 Transporter-associated domain Amet_2896 2b9014330d8a0754b00771b91125f811 364 PIRSF PIRSF006641 1 364 3.8E-157 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Amet_2896 2b9014330d8a0754b00771b91125f811 364 Gene3D G3DSA:1.10.150.300 111 197 8.4E-156 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Amet_2896 2b9014330d8a0754b00771b91125f811 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 2.9E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2896 2b9014330d8a0754b00771b91125f811 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 42 2.9E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2896 2b9014330d8a0754b00771b91125f811 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 85 103 2.9E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2896 2b9014330d8a0754b00771b91125f811 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 3 23 2.9E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2896 2b9014330d8a0754b00771b91125f811 364 SUPERFAMILY SSF81271 280 361 1.29E-34 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Amet_2896 2b9014330d8a0754b00771b91125f811 364 Pfam PF01926 50S ribosome-binding GTPase 3 118 2.3E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2896 2b9014330d8a0754b00771b91125f811 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 2 364 3.6E-153 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Amet_2896 2b9014330d8a0754b00771b91125f811 364 Gene3D G3DSA:3.40.50.300 1 279 8.4E-156 T 12-10-2018 Amet_2896 2b9014330d8a0754b00771b91125f811 364 SUPERFAMILY SSF52540 1 302 1.77E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2896 2b9014330d8a0754b00771b91125f811 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 364 44.278 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Amet_2896 2b9014330d8a0754b00771b91125f811 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 2.7E-38 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Amet_2896 2b9014330d8a0754b00771b91125f811 364 Gene3D G3DSA:3.10.20.30 46 362 8.4E-156 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_3320 4d69104b65bda7d65a670d369920724e 441 Pfam PF01547 Bacterial extracellular solute-binding protein 60 353 2.2E-32 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amet_3320 4d69104b65bda7d65a670d369920724e 441 Gene3D G3DSA:3.40.190.10 161 428 1.5E-112 T 12-10-2018 Amet_3320 4d69104b65bda7d65a670d369920724e 441 SUPERFAMILY SSF53850 21 436 5.89E-72 T 12-10-2018 Amet_3320 4d69104b65bda7d65a670d369920724e 441 Gene3D G3DSA:3.40.190.10 64 397 1.5E-112 T 12-10-2018 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 Gene3D G3DSA:3.40.50.720 197 408 4.7E-57 T 12-10-2018 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 312 402 7.9E-19 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 SMART SM00984 311 403 2.8E-18 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 PIRSF PIRSF500136 1 408 2.4E-138 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 PIRSF PIRSF000124 3 408 1.2E-73 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 285 7.3E-25 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 SUPERFAMILY SSF51735 4 192 1.69E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 SUPERFAMILY SSF48179 197 291 3.4E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 Gene3D G3DSA:3.40.50.720 1 196 9.5E-57 T 12-10-2018 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 170 3.6E-43 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 SUPERFAMILY SSF52413 308 405 6.8E-20 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Amet_0206 a43bd5091719b3a0c19e2d8cc4ee8de7 409 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 399 5.3E-130 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Amet_4025 52f16e6f40c433dfdc4125d04f4f9929 110 Pfam PF05521 Phage head-tail joining protein 7 103 2.4E-13 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor Amet_4025 52f16e6f40c433dfdc4125d04f4f9929 110 Gene3D G3DSA:2.40.10.270 1 108 3.1E-7 T 12-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily Amet_1530 14f2bc07eab31081b4f6082c0b25e7c0 515 Pfam PF02156 Glycosyl hydrolase family 26 293 430 5.9E-15 T 12-10-2018 IPR022790 Glycosyl hydrolase family 26 domain GO:0004553 Amet_1530 14f2bc07eab31081b4f6082c0b25e7c0 515 Gene3D G3DSA:3.20.20.80 223 512 5.3E-65 T 12-10-2018 Amet_1530 14f2bc07eab31081b4f6082c0b25e7c0 515 SUPERFAMILY SSF51445 263 492 3.71E-42 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_1090 7da69337d8dc2a020788db1dc72acbe6 506 Pfam PF13181 Tetratricopeptide repeat 458 488 8.5E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1090 7da69337d8dc2a020788db1dc72acbe6 506 SUPERFAMILY SSF48452 371 491 1.09E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1090 7da69337d8dc2a020788db1dc72acbe6 506 SUPERFAMILY SSF101478 38 353 2.62E-43 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amet_1090 7da69337d8dc2a020788db1dc72acbe6 506 Gene3D G3DSA:1.25.40.10 364 505 8.0E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1090 7da69337d8dc2a020788db1dc72acbe6 506 SMART SM00028 422 455 0.025 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1090 7da69337d8dc2a020788db1dc72acbe6 506 SMART SM00028 456 489 3.0E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1090 7da69337d8dc2a020788db1dc72acbe6 506 SMART SM00028 378 411 43.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1090 7da69337d8dc2a020788db1dc72acbe6 506 Pfam PF03747 ADP-ribosylglycohydrolase 45 330 1.4E-33 T 12-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Amet_1090 7da69337d8dc2a020788db1dc72acbe6 506 Gene3D G3DSA:1.10.4080.10 34 363 2.1E-52 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amet_1373 ab77a375721cb0ba55eae36ec32ec689 270 Gene3D G3DSA:3.30.70.20 6 62 1.9E-11 T 12-10-2018 Amet_1373 ab77a375721cb0ba55eae36ec32ec689 270 SUPERFAMILY SSF54862 6 73 4.19E-16 T 12-10-2018 Amet_1373 ab77a375721cb0ba55eae36ec32ec689 270 Pfam PF12837 4Fe-4S binding domain 8 28 1.7E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_2638 3e399e59e97e4f1ab48e22dccc77baa1 465 SUPERFAMILY SSF89000 299 449 3.92E-52 T 12-10-2018 Amet_2638 3e399e59e97e4f1ab48e22dccc77baa1 465 Gene3D G3DSA:3.20.20.70 1 455 2.9E-172 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2638 3e399e59e97e4f1ab48e22dccc77baa1 465 Pfam PF00682 HMGL-like 4 269 7.0E-50 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amet_2638 3e399e59e97e4f1ab48e22dccc77baa1 465 Pfam PF02436 Conserved carboxylase domain 296 446 1.7E-52 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Amet_2638 3e399e59e97e4f1ab48e22dccc77baa1 465 SUPERFAMILY SSF51569 1 279 2.01E-91 T 12-10-2018 Amet_3826 e25fff32e17cdcf86ff364f3d984b3cc 226 SUPERFAMILY SSF51182 102 216 8.6E-15 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Amet_3826 e25fff32e17cdcf86ff364f3d984b3cc 226 Pfam PF06249 Ethanolamine utilisation protein EutQ 110 215 1.3E-14 T 12-10-2018 IPR010424 Ethanolamine utilisation EutQ Amet_3826 e25fff32e17cdcf86ff364f3d984b3cc 226 Gene3D G3DSA:2.60.120.10 90 223 8.6E-29 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 Pfam PF13237 4Fe-4S dicluster domain 9 54 5.9E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 SUPERFAMILY SSF54862 10 64 3.56E-15 T 12-10-2018 Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 Gene3D G3DSA:3.40.50.1780 60 235 5.1E-33 T 12-10-2018 Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 Gene3D G3DSA:3.40.950.10 115 160 5.1E-33 T 12-10-2018 Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 SUPERFAMILY SSF53920 43 330 8.37E-44 T 12-10-2018 IPR009016 Iron hydrogenase Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 Gene3D G3DSA:3.20.20.20 367 417 1.1E-8 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 90 306 2.2E-26 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 Pfam PF04060 Putative Fe-S cluster 377 409 1.4E-12 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3183 cd58b890069d7a76e3ee9d3e3fe248df 417 Gene3D G3DSA:3.30.70.20 10 59 5.1E-33 T 12-10-2018 Amet_2032 9adb12ca84b492782cf5f7c1d065c3ae 122 ProDom PD053081 COIL MM0410 AF2262 COILED 67 119 3.0E-24 T 12-10-2018 Amet_3422 ce4244ee8e89f1fb1672ca1d1537f5bc 402 Pfam PF02655 ATP-grasp domain 158 309 1.0E-5 T 12-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 Amet_3422 ce4244ee8e89f1fb1672ca1d1537f5bc 402 SUPERFAMILY SSF56059 151 334 9.5E-18 T 12-10-2018 Amet_3422 ce4244ee8e89f1fb1672ca1d1537f5bc 402 Gene3D G3DSA:3.30.1490.20 150 215 2.0E-5 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_3422 ce4244ee8e89f1fb1672ca1d1537f5bc 402 Gene3D G3DSA:3.30.470.20 216 306 2.0E-5 T 12-10-2018 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 SMART SM00342 158 241 3.6E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 SUPERFAMILY SSF52172 4 124 1.38E-26 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 Pfam PF00072 Response regulator receiver domain 4 116 4.7E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 Gene3D G3DSA:3.40.50.2300 2 128 9.9E-26 T 12-10-2018 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 SMART SM00448 2 116 1.7E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 SUPERFAMILY SSF46689 194 244 1.93E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 241 9.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 210 225 9.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 Gene3D G3DSA:1.10.10.60 191 246 4.2E-21 T 12-10-2018 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 Gene3D G3DSA:1.10.10.60 139 190 1.7E-17 T 12-10-2018 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 Pfam PF12833 Helix-turn-helix domain 165 242 3.2E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3844 f340d56b498f191ebeec46b2abfa8f58 246 SUPERFAMILY SSF46689 143 192 9.86E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1323 c3b13b3fc66335a6ce9b1e55f746af40 124 SMART SM00345 16 75 2.5E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1323 c3b13b3fc66335a6ce9b1e55f746af40 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.6E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1323 c3b13b3fc66335a6ce9b1e55f746af40 124 SUPERFAMILY SSF46785 5 79 8.16E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1323 c3b13b3fc66335a6ce9b1e55f746af40 124 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 9.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1323 c3b13b3fc66335a6ce9b1e55f746af40 124 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 9.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1323 c3b13b3fc66335a6ce9b1e55f746af40 124 Gene3D G3DSA:1.10.10.10 9 124 2.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1691 0ea25be55751a36eb13f69dfbacce56d 237 Gene3D G3DSA:3.40.50.2300 1 134 1.0E-35 T 12-10-2018 Amet_1691 0ea25be55751a36eb13f69dfbacce56d 237 Gene3D G3DSA:1.10.10.10 135 237 4.4E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1691 0ea25be55751a36eb13f69dfbacce56d 237 Pfam PF00072 Response regulator receiver domain 10 119 2.0E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1691 0ea25be55751a36eb13f69dfbacce56d 237 SUPERFAMILY SSF52172 7 189 6.94E-38 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1691 0ea25be55751a36eb13f69dfbacce56d 237 SMART SM00448 8 119 3.0E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1691 0ea25be55751a36eb13f69dfbacce56d 237 SMART SM00862 156 232 7.5E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1691 0ea25be55751a36eb13f69dfbacce56d 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.7E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3757 a05d77dd1b1803945ab2ba00fd1ac0e3 350 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 335 1.3E-57 T 12-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Amet_3757 a05d77dd1b1803945ab2ba00fd1ac0e3 350 SUPERFAMILY SSF100950 9 342 7.87E-78 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_3757 a05d77dd1b1803945ab2ba00fd1ac0e3 350 Gene3D G3DSA:1.20.120.420 48 144 6.5E-73 T 12-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Amet_3757 a05d77dd1b1803945ab2ba00fd1ac0e3 350 Gene3D G3DSA:3.40.50.10470 145 335 6.5E-73 T 12-10-2018 Amet_3757 a05d77dd1b1803945ab2ba00fd1ac0e3 350 Pfam PF01008 Initiation factor 2 subunit family 84 335 9.5E-43 T 12-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Amet_1565 49a86c5add18554c23a63a70ccfc7478 112 SUPERFAMILY SSF46785 3 102 2.89E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1565 49a86c5add18554c23a63a70ccfc7478 112 Gene3D G3DSA:1.10.10.10 1 108 2.0E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1565 49a86c5add18554c23a63a70ccfc7478 112 Pfam PF03551 Transcriptional regulator PadR-like family 16 88 8.7E-24 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 7 625 45.059 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 SMART SM00861 319 482 2.1E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 Pfam PF02779 Transketolase, pyrimidine binding domain 319 479 2.9E-37 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 SUPERFAMILY SSF52518 4 381 1.88E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 Gene3D G3DSA:3.40.50.920 494 625 6.4E-29 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 9 622 5.4E-257 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 8 283 5.7E-125 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 SUPERFAMILY SSF52518 318 499 9.77E-54 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 Gene3D G3DSA:3.40.50.970 317 488 4.1E-70 T 12-10-2018 Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 ProSitePatterns PS00801 Transketolase signature 1. 33 52 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 Pfam PF02780 Transketolase, C-terminal domain 494 616 9.5E-27 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Amet_2508 8e0afdbe4f68dc4b200468365eff5f9f 636 SUPERFAMILY SSF52922 490 622 2.49E-27 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_4542 a6c8d1c518a415600f79c9863835164e 559 SUPERFAMILY SSF51703 10 553 1.88E-216 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_4542 a6c8d1c518a415600f79c9863835164e 559 Gene3D G3DSA:3.20.20.240 1 559 1.3E-255 T 12-10-2018 Amet_4542 a6c8d1c518a415600f79c9863835164e 559 Pfam PF01642 Methylmalonyl-CoA mutase 39 551 7.1E-229 T 12-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_4542 a6c8d1c518a415600f79c9863835164e 559 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 38 556 5.1E-255 T 12-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 Pfam PF10531 SLBB domain 161 207 3.7E-14 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 Pfam PF13375 RnfC Barrel sandwich hybrid domain 379 437 2.4E-15 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 Gene3D G3DSA:3.40.50.11540 12 155 5.5E-14 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 SUPERFAMILY SSF142019 2 165 1.19E-42 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 SUPERFAMILY SSF46548 229 331 5.41E-12 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 Gene3D G3DSA:3.10.20.600 156 232 7.5E-6 T 12-10-2018 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 Pfam PF13534 4Fe-4S dicluster domain 255 313 2.4E-8 T 12-10-2018 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 PIRSF PIRSF036408 1 443 1.3E-203 T 12-10-2018 IPR017054 Propanediol utilization protein, PduS, predicted Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 8 150 1.6E-47 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 SUPERFAMILY SSF142984 160 232 3.4E-13 T 12-10-2018 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 Gene3D G3DSA:3.30.70.3270 233 374 3.3E-6 T 12-10-2018 Amet_0266 f7cfc61704d6f294559f8146ab5b7fdb 448 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 255 266 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3831 bdfa0b9e525a125c0f159a59a89fcae6 281 SUPERFAMILY SSF53067 144 273 1.87E-27 T 12-10-2018 Amet_3831 bdfa0b9e525a125c0f159a59a89fcae6 281 SUPERFAMILY SSF53067 32 121 2.41E-8 T 12-10-2018 Amet_3831 bdfa0b9e525a125c0f159a59a89fcae6 281 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 147 160 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amet_3831 bdfa0b9e525a125c0f159a59a89fcae6 281 Gene3D G3DSA:3.30.420.40 33 273 1.3E-99 T 12-10-2018 Amet_3831 bdfa0b9e525a125c0f159a59a89fcae6 281 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 36 274 2.9E-96 T 12-10-2018 IPR013366 Ethanolamine utilisation EutJ Amet_3831 bdfa0b9e525a125c0f159a59a89fcae6 281 Pfam PF11104 Type IV pilus assembly protein PilM; 144 257 2.6E-12 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Amet_3831 bdfa0b9e525a125c0f159a59a89fcae6 281 Gene3D G3DSA:3.30.420.40 146 259 1.3E-99 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Pfam PF08447 PAS fold 297 383 3.3E-19 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Pfam PF08447 PAS fold 170 256 5.3E-18 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Pfam PF08447 PAS fold 425 509 7.7E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Pfam PF00563 EAL domain 837 1072 4.8E-74 T 12-10-2018 IPR001633 EAL domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Pfam PF07238 PilZ domain 1102 1203 1.4E-6 T 12-10-2018 IPR009875 PilZ domain GO:0035438 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:3.30.70.270 659 834 2.4E-50 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SUPERFAMILY SSF55785 20 133 4.35E-8 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SUPERFAMILY SSF55785 283 390 5.64E-17 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:3.30.450.20 25 149 3.0E-8 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:3.30.450.20 532 658 1.7E-17 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:3.20.20.450 835 1087 1.6E-97 T 12-10-2018 IPR035919 EAL domain superfamily Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Pfam PF13426 PAS domain 547 648 3.3E-11 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Pfam PF13426 PAS domain 36 133 0.013 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:3.30.450.20 397 466 2.3E-19 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:3.30.450.20 274 340 7.9E-18 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SUPERFAMILY SSF55073 665 823 4.08E-43 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00267 649 821 5.7E-51 T 12-10-2018 IPR000160 GGDEF domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:3.30.450.20 158 216 5.9E-14 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Pfam PF00990 Diguanylate cyclase, GGDEF domain 660 817 4.0E-43 T 12-10-2018 IPR000160 GGDEF domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:2.10.70.100 217 263 3.8E-12 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:2.10.70.100 471 517 3.9E-15 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 Gene3D G3DSA:2.10.70.100 344 390 9.6E-12 T 12-10-2018 Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00052 831 1077 2.0E-109 T 12-10-2018 IPR001633 EAL domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 291 393 8.1E-9 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 417 519 2.2E-8 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 534 655 6.1E-18 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 194 269 1.2E-5 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SUPERFAMILY SSF55785 411 518 5.32E-15 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SUPERFAMILY SSF55785 156 263 2.44E-17 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00086 347 389 1.0E-5 T 12-10-2018 IPR001610 PAC motif Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00086 220 262 3.9E-5 T 12-10-2018 IPR001610 PAC motif Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00086 474 516 1.1E-4 T 12-10-2018 IPR001610 PAC motif Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 657 820 3.4E-34 T 12-10-2018 IPR000160 GGDEF domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SUPERFAMILY SSF55785 548 656 1.06E-14 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SUPERFAMILY SSF141868 837 1085 9.94E-89 T 12-10-2018 IPR035919 EAL domain superfamily Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00091 274 342 0.96 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00091 23 89 0.25 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00091 535 601 1.2E-6 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00091 401 469 20.0 T 12-10-2018 IPR000014 PAS domain Amet_3249 875ef0e2bc5a3307a0dc7f9738eae63a 1242 SMART SM00091 143 215 6.1 T 12-10-2018 IPR000014 PAS domain Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 28 339 4.0E-136 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 Pfam PF00814 Glycoprotease family 47 332 4.9E-103 T 12-10-2018 IPR000905 Gcp-like domain Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 25 357 64.298 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 Gene3D G3DSA:3.30.420.40 28 339 3.0E-126 T 12-10-2018 Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 Gene3D G3DSA:3.30.420.40 153 319 3.0E-126 T 12-10-2018 Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 SUPERFAMILY SSF53067 126 337 3.89E-43 T 12-10-2018 Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 SUPERFAMILY SSF53067 27 147 4.86E-29 T 12-10-2018 Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 121 140 3.2E-47 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 178 199 3.2E-47 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 120 3.2E-47 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 28 41 3.2E-47 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 155 167 3.2E-47 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 289 298 3.2E-47 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_0808 9e349f9c7ebcc435beac2e2835067bea 359 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 28 332 7.7E-111 T 12-10-2018 IPR017861 Kae1/TsaD family Amet_3047 d78d889690ca11776c31daf4cc05295a 378 Pfam PF00684 DnaJ central domain 149 213 1.1E-13 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Amet_3047 d78d889690ca11776c31daf4cc05295a 378 Pfam PF01556 DnaJ C terminal domain 122 339 3.3E-43 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal Amet_3047 d78d889690ca11776c31daf4cc05295a 378 Pfam PF00226 DnaJ domain 5 67 6.6E-27 T 12-10-2018 IPR001623 DnaJ domain Amet_3047 d78d889690ca11776c31daf4cc05295a 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 356 6.5E-138 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Amet_3047 d78d889690ca11776c31daf4cc05295a 378 SUPERFAMILY SSF57938 136 217 6.54E-18 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Amet_3047 d78d889690ca11776c31daf4cc05295a 378 Gene3D G3DSA:2.60.260.20 260 369 1.8E-29 T 12-10-2018 Amet_3047 d78d889690ca11776c31daf4cc05295a 378 SMART SM00271 4 62 4.1E-32 T 12-10-2018 IPR001623 DnaJ domain Amet_3047 d78d889690ca11776c31daf4cc05295a 378 PRINTS PR00625 DnaJ domain signature 62 81 1.9E-31 T 12-10-2018 IPR001623 DnaJ domain Amet_3047 d78d889690ca11776c31daf4cc05295a 378 PRINTS PR00625 DnaJ domain signature 42 62 1.9E-31 T 12-10-2018 IPR001623 DnaJ domain Amet_3047 d78d889690ca11776c31daf4cc05295a 378 PRINTS PR00625 DnaJ domain signature 7 25 1.9E-31 T 12-10-2018 IPR001623 DnaJ domain Amet_3047 d78d889690ca11776c31daf4cc05295a 378 PRINTS PR00625 DnaJ domain signature 25 40 1.9E-31 T 12-10-2018 IPR001623 DnaJ domain Amet_3047 d78d889690ca11776c31daf4cc05295a 378 Gene3D G3DSA:1.10.287.110 1 115 1.8E-35 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Amet_3047 d78d889690ca11776c31daf4cc05295a 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 40.87 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Amet_3047 d78d889690ca11776c31daf4cc05295a 378 SUPERFAMILY SSF49493 116 262 2.09E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Amet_3047 d78d889690ca11776c31daf4cc05295a 378 Gene3D G3DSA:2.10.230.10 149 213 2.1E-35 T 12-10-2018 Amet_3047 d78d889690ca11776c31daf4cc05295a 378 Gene3D G3DSA:2.60.260.20 119 255 2.1E-35 T 12-10-2018 Amet_3047 d78d889690ca11776c31daf4cc05295a 378 SUPERFAMILY SSF46565 2 107 3.14E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Amet_3047 d78d889690ca11776c31daf4cc05295a 378 SUPERFAMILY SSF49493 265 350 1.83E-22 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Amet_2787 e07eb6c464789c953bfd83a4420e7535 829 SUPERFAMILY SSF52540 301 690 5.97E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2787 e07eb6c464789c953bfd83a4420e7535 829 SMART SM00487 279 479 1.4E-17 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_2787 e07eb6c464789c953bfd83a4420e7535 829 SMART SM00490 586 679 2.9E-8 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_2787 e07eb6c464789c953bfd83a4420e7535 829 Gene3D G3DSA:1.10.8.630 6 121 4.1E-23 T 12-10-2018 Amet_2787 e07eb6c464789c953bfd83a4420e7535 829 TIGRFAM TIGR00595 priA: primosomal protein N' 307 826 1.5E-194 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Amet_2787 e07eb6c464789c953bfd83a4420e7535 829 Pfam PF04851 Type III restriction enzyme, res subunit 282 446 1.3E-15 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amet_2787 e07eb6c464789c953bfd83a4420e7535 829 Pfam PF00271 Helicase conserved C-terminal domain 581 678 9.3E-11 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_2787 e07eb6c464789c953bfd83a4420e7535 829 Gene3D G3DSA:3.40.50.300 272 466 3.7E-67 T 12-10-2018 Amet_2787 e07eb6c464789c953bfd83a4420e7535 829 Hamap MF_00983 Probable primosomal protein N' [priA]. 13 828 23.66 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Amet_0284 d442b5289cf5efdc79bca86afa46fd2d 195 Pfam PF01025 GrpE 32 187 1.9E-16 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Amet_0284 d442b5289cf5efdc79bca86afa46fd2d 195 Gene3D G3DSA:2.30.22.10 131 194 1.6E-8 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Amet_0284 d442b5289cf5efdc79bca86afa46fd2d 195 SUPERFAMILY SSF51064 133 189 7.19E-9 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Amet_3630 79299184cce67b3312fb03f41296f195 1027 Gene3D G3DSA:3.30.70.1440 660 855 0.0 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 Gene3D G3DSA:3.30.70.1320 134 323 0.0 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 Gene3D G3DSA:1.20.1640.10 10 503 0.0 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 SUPERFAMILY SSF82714 183 263 5.1E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_3630 79299184cce67b3312fb03f41296f195 1027 SUPERFAMILY SSF82714 712 797 6.28E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_3630 79299184cce67b3312fb03f41296f195 1027 SUPERFAMILY SSF82693 557 655 4.71E-14 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 SUPERFAMILY SSF82866 795 1019 1.19E-49 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 SUPERFAMILY SSF82693 40 134 1.71E-26 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 Pfam PF00873 AcrB/AcrD/AcrF family 4 1016 6.0E-266 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_3630 79299184cce67b3312fb03f41296f195 1027 Gene3D G3DSA:3.30.70.1430 558 659 0.0 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 Gene3D G3DSA:1.20.1640.10 504 1013 0.0 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 Gene3D G3DSA:3.30.2090.10 710 798 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_3630 79299184cce67b3312fb03f41296f195 1027 Gene3D G3DSA:3.30.2090.10 177 267 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_3630 79299184cce67b3312fb03f41296f195 1027 SUPERFAMILY SSF82693 136 321 9.59E-15 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 SUPERFAMILY SSF82866 290 487 1.05E-43 T 12-10-2018 Amet_3630 79299184cce67b3312fb03f41296f195 1027 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 3.8E-48 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_3630 79299184cce67b3312fb03f41296f195 1027 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 3.8E-48 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_3630 79299184cce67b3312fb03f41296f195 1027 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 3.8E-48 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_3630 79299184cce67b3312fb03f41296f195 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.8E-48 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_3630 79299184cce67b3312fb03f41296f195 1027 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 3.8E-48 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_3630 79299184cce67b3312fb03f41296f195 1027 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 3.8E-48 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_3630 79299184cce67b3312fb03f41296f195 1027 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 3.8E-48 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_3630 79299184cce67b3312fb03f41296f195 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.8E-48 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_3630 79299184cce67b3312fb03f41296f195 1027 Gene3D G3DSA:3.30.70.1430 40 806 0.0 T 12-10-2018 Amet_3279 0035ca8e52e2707a62659334dd7ad2b1 205 Gene3D G3DSA:3.40.50.150 13 203 7.6E-39 T 12-10-2018 Amet_3279 0035ca8e52e2707a62659334dd7ad2b1 205 SUPERFAMILY SSF53335 8 194 1.38E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_3279 0035ca8e52e2707a62659334dd7ad2b1 205 Pfam PF08241 Methyltransferase domain 46 140 7.2E-23 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SMART SM00304 365 417 2.7E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 701 850 9.8E-34 T 12-10-2018 IPR000160 GGDEF domain Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SUPERFAMILY SSF109604 859 1033 1.85E-33 T 12-10-2018 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SMART SM00267 693 859 9.3E-40 T 12-10-2018 IPR000160 GGDEF domain Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SUPERFAMILY SSF158472 368 416 6.02E-10 T 12-10-2018 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SMART SM00091 442 510 1.2E-5 T 12-10-2018 IPR000014 PAS domain Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SMART SM00091 574 639 1.7E-5 T 12-10-2018 IPR000014 PAS domain Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SMART SM00086 651 693 0.005 T 12-10-2018 IPR001610 PAC motif Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SMART SM00086 521 562 7.7 T 12-10-2018 IPR001610 PAC motif Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SUPERFAMILY SSF55785 558 687 1.36E-20 T 12-10-2018 IPR035965 PAS domain superfamily Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SUPERFAMILY SSF55073 709 849 1.41E-32 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Pfam PF00989 PAS fold 443 557 3.4E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Pfam PF00989 PAS fold 576 689 2.8E-13 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Gene3D G3DSA:1.20.1480.50 330 424 5.9E-13 T 12-10-2018 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Pfam PF00990 Diguanylate cyclase, GGDEF domain 705 849 3.8E-33 T 12-10-2018 IPR000160 GGDEF domain Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Gene3D G3DSA:3.30.450.20 583 691 1.4E-26 T 12-10-2018 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Gene3D G3DSA:1.10.3210.10 854 1037 8.8E-63 T 12-10-2018 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 439 568 1.3E-11 T 12-10-2018 IPR000014 PAS domain Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 573 695 4.9E-15 T 12-10-2018 IPR000014 PAS domain Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SMART SM00471 870 1005 1.7E-4 T 12-10-2018 IPR003607 HD/PDEase domain Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Pfam PF00672 HAMP domain 368 412 3.4E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Gene3D G3DSA:3.30.450.20 430 568 2.8E-20 T 12-10-2018 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 SUPERFAMILY SSF55785 433 558 5.93E-16 T 12-10-2018 IPR035965 PAS domain superfamily Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Pfam PF02743 Cache domain 45 289 1.4E-14 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Gene3D G3DSA:3.30.70.270 697 853 5.2E-39 T 12-10-2018 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Gene3D G3DSA:3.30.450.20 118 224 9.3E-16 T 12-10-2018 Amet_0967 dee3cfeaef1847485ed7b812288c299b 1047 Pfam PF13487 HD domain 926 987 3.2E-20 T 12-10-2018 Amet_2771 a1b58761e829fa81b60f98734261e977 542 SMART SM01121 231 542 1.3E-182 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain Amet_2771 a1b58761e829fa81b60f98734261e977 542 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 542 8.6E-205 T 12-10-2018 IPR019986 DAK2 domain-containing protein YloV Amet_2771 a1b58761e829fa81b60f98734261e977 542 Pfam PF02734 DAK2 domain 36 200 8.8E-43 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amet_2771 a1b58761e829fa81b60f98734261e977 542 SUPERFAMILY SSF101473 6 202 1.44E-46 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amet_2771 a1b58761e829fa81b60f98734261e977 542 Gene3D G3DSA:1.25.40.340 5 193 1.6E-11 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amet_2771 a1b58761e829fa81b60f98734261e977 542 Pfam PF13684 Dihydroxyacetone kinase family 231 542 3.6E-127 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain Amet_2771 a1b58761e829fa81b60f98734261e977 542 SMART SM01120 36 201 1.3E-67 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amet_0492 99ed612517313e997c5e3b742e08f3ca 402 SUPERFAMILY SSF51306 284 340 6.02E-8 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amet_0492 99ed612517313e997c5e3b742e08f3ca 402 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 291 306 4.5E-6 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Amet_0492 99ed612517313e997c5e3b742e08f3ca 402 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 351 362 4.5E-6 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Amet_0492 99ed612517313e997c5e3b742e08f3ca 402 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 284 387 3.3E-19 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Amet_0492 99ed612517313e997c5e3b742e08f3ca 402 Pfam PF00717 Peptidase S24-like 291 329 2.6E-6 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amet_0306 1f86e2ec138d066ce209ddc6cf2e8d24 296 SUPERFAMILY SSF53448 3 253 4.92E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_0306 1f86e2ec138d066ce209ddc6cf2e8d24 296 Gene3D G3DSA:3.90.550.10 1 203 2.1E-33 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_0306 1f86e2ec138d066ce209ddc6cf2e8d24 296 Pfam PF00535 Glycosyl transferase family 2 7 167 1.8E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amet_3586 8e7b38d54a1ca34bf75441d97381ab5b 242 SUPERFAMILY SSF102114 29 210 1.57E-17 T 12-10-2018 Amet_3586 8e7b38d54a1ca34bf75441d97381ab5b 242 Gene3D G3DSA:3.20.20.70 7 239 2.3E-46 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3586 8e7b38d54a1ca34bf75441d97381ab5b 242 ProSitePatterns PS01087 Radical activating enzymes signature. 21 42 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Amet_3586 8e7b38d54a1ca34bf75441d97381ab5b 242 Pfam PF04055 Radical SAM superfamily 28 161 5.0E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3586 8e7b38d54a1ca34bf75441d97381ab5b 242 Pfam PF13353 4Fe-4S single cluster domain 19 140 2.2E-15 T 12-10-2018 Amet_0791 23b94c67f9517393492fafaa21477738 329 Pfam PF00472 RF-1 domain 188 297 1.1E-42 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Amet_0791 23b94c67f9517393492fafaa21477738 329 Gene3D G3DSA:3.30.70.1660 89 317 8.4E-98 T 12-10-2018 Amet_0791 23b94c67f9517393492fafaa21477738 329 Pfam PF03462 PCRF domain 1 179 5.1E-55 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Amet_0791 23b94c67f9517393492fafaa21477738 329 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 324 2.6E-148 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Amet_0791 23b94c67f9517393492fafaa21477738 329 Gene3D G3DSA:1.20.58.410 1 73 1.3E-10 T 12-10-2018 Amet_0791 23b94c67f9517393492fafaa21477738 329 SUPERFAMILY SSF75620 1 325 5.62E-129 T 12-10-2018 Amet_0791 23b94c67f9517393492fafaa21477738 329 Gene3D G3DSA:3.30.160.20 185 280 8.4E-98 T 12-10-2018 Amet_0791 23b94c67f9517393492fafaa21477738 329 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 325 34.901 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Amet_0791 23b94c67f9517393492fafaa21477738 329 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 204 220 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Amet_0791 23b94c67f9517393492fafaa21477738 329 SMART SM00937 45 154 1.1E-39 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Amet_2722 0fea200b08cd9a6a47f7e54bb4a7aea4 436 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 347 356 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_2722 0fea200b08cd9a6a47f7e54bb4a7aea4 436 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 356 4.7E-74 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_2722 0fea200b08cd9a6a47f7e54bb4a7aea4 436 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 23 436 2.8E-205 T 12-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_2722 0fea200b08cd9a6a47f7e54bb4a7aea4 436 Gene3D G3DSA:3.40.50.12240 14 436 4.9E-157 T 12-10-2018 Amet_2722 0fea200b08cd9a6a47f7e54bb4a7aea4 436 SUPERFAMILY SSF52540 94 362 7.98E-97 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2722 0fea200b08cd9a6a47f7e54bb4a7aea4 436 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 90 6.9E-9 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_2722 0fea200b08cd9a6a47f7e54bb4a7aea4 436 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 436 6.4E-193 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_2722 0fea200b08cd9a6a47f7e54bb4a7aea4 436 SMART SM00382 159 341 2.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4325 3d59bd1ce70d1b326bf40964a4c54f5f 199 Pfam PF03358 NADPH-dependent FMN reductase 3 130 1.1E-20 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Amet_4325 3d59bd1ce70d1b326bf40964a4c54f5f 199 SUPERFAMILY SSF52218 1 191 2.68E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_4325 3d59bd1ce70d1b326bf40964a4c54f5f 199 Gene3D G3DSA:3.40.50.360 2 188 9.3E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_4007 21ed7f31115929bf1a8f88543740b900 521 Pfam PF07508 Recombinase 191 296 2.0E-24 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_4007 21ed7f31115929bf1a8f88543740b900 521 SMART SM00857 22 171 4.7E-46 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_4007 21ed7f31115929bf1a8f88543740b900 521 SUPERFAMILY SSF53041 21 171 3.66E-34 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_4007 21ed7f31115929bf1a8f88543740b900 521 Gene3D G3DSA:3.40.50.1390 16 153 3.1E-46 T 12-10-2018 Amet_4007 21ed7f31115929bf1a8f88543740b900 521 Gene3D G3DSA:1.10.10.2600 157 298 9.7E-23 T 12-10-2018 IPR038109 DNA-binding recombinase domain superfamily Amet_4007 21ed7f31115929bf1a8f88543740b900 521 Pfam PF13408 Recombinase zinc beta ribbon domain 315 371 2.8E-10 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_4007 21ed7f31115929bf1a8f88543740b900 521 Pfam PF00239 Resolvase, N terminal domain 22 170 3.1E-31 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 SUPERFAMILY SSF51246 326 416 7.32E-27 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 416 2.6E-158 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 6.7E-36 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 1.0E-72 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 SMART SM01209 101 293 1.4E-115 T 12-10-2018 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 SUPERFAMILY SSF56059 102 322 3.03E-57 T 12-10-2018 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 Gene3D G3DSA:3.30.470.20 189 326 5.2E-52 T 12-10-2018 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 416 8.6E-27 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 419 40.124 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 Gene3D G3DSA:3.30.1490.20 121 188 6.8E-21 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 SMART SM01210 327 419 5.6E-43 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 Gene3D G3DSA:3.90.600.10 327 419 7.7E-33 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 SUPERFAMILY SSF52440 1 101 9.06E-36 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 Gene3D G3DSA:3.40.50.20 2 93 7.9E-37 T 12-10-2018 Amet_0926 1598a4ccf1f9f65f754e8e111d3499f2 419 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_1907 06c1c4214ecdf6a822f7f7d313b4ddcf 256 Gene3D G3DSA:3.40.50.1820 3 255 1.7E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_1907 06c1c4214ecdf6a822f7f7d313b4ddcf 256 SUPERFAMILY SSF53474 5 254 2.01E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_1907 06c1c4214ecdf6a822f7f7d313b4ddcf 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 2.6E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_1907 06c1c4214ecdf6a822f7f7d313b4ddcf 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 2.6E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_1907 06c1c4214ecdf6a822f7f7d313b4ddcf 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 2.6E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_1907 06c1c4214ecdf6a822f7f7d313b4ddcf 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 2.6E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_1907 06c1c4214ecdf6a822f7f7d313b4ddcf 256 Pfam PF12146 Serine aminopeptidase, S33 25 239 9.9E-21 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 Amet_0166 d1231f51329a244655bde625387b099c 82 Gene3D G3DSA:3.10.290.10 1 82 5.6E-26 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_0166 d1231f51329a244655bde625387b099c 82 SUPERFAMILY SSF55174 1 74 3.14E-21 T 12-10-2018 Amet_0166 d1231f51329a244655bde625387b099c 82 PIRSF PIRSF038881 1 82 2.0E-30 T 12-10-2018 IPR025490 RNA-binding protein, HP1423 type Amet_0166 d1231f51329a244655bde625387b099c 82 SMART SM00363 1 61 2.2E-13 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_0166 d1231f51329a244655bde625387b099c 82 Pfam PF01479 S4 domain 1 47 5.8E-13 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_1446 4862d111e6f65dea56db2f8f13bdeff3 552 PIRSF PIRSF000076 5 548 8.2E-222 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Amet_1446 4862d111e6f65dea56db2f8f13bdeff3 552 SUPERFAMILY SSF56821 5 545 1.7E-186 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Amet_1446 4862d111e6f65dea56db2f8f13bdeff3 552 Gene3D G3DSA:3.40.50.2030 228 377 1.4E-66 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_1446 4862d111e6f65dea56db2f8f13bdeff3 552 Gene3D G3DSA:1.20.1270.20 143 226 1.6E-24 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_1446 4862d111e6f65dea56db2f8f13bdeff3 552 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 5 545 6.9E-216 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Amet_1446 4862d111e6f65dea56db2f8f13bdeff3 552 Gene3D G3DSA:1.20.1270.20 2 140 5.3E-44 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_1446 4862d111e6f65dea56db2f8f13bdeff3 552 Gene3D G3DSA:3.40.50.2030 378 546 5.1E-64 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_1446 4862d111e6f65dea56db2f8f13bdeff3 552 Hamap MF_00069 Hydroxylamine reductase [hcp]. 5 547 20.375 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Amet_1446 4862d111e6f65dea56db2f8f13bdeff3 552 Pfam PF03063 Prismane/CO dehydrogenase family 5 542 1.2E-167 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Amet_0302 4f656f969d7318e63af14c0bfda6c971 329 Gene3D G3DSA:3.90.25.10 185 320 5.1E-130 T 12-10-2018 Amet_0302 4f656f969d7318e63af14c0bfda6c971 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 3.8E-61 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amet_0302 4f656f969d7318e63af14c0bfda6c971 329 SUPERFAMILY SSF51735 1 326 1.9E-99 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0302 4f656f969d7318e63af14c0bfda6c971 329 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 324 4.4E-141 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Amet_0302 4f656f969d7318e63af14c0bfda6c971 329 Gene3D G3DSA:3.40.50.720 3 264 5.1E-130 T 12-10-2018 Amet_3720 a0fc169a44d7d54c4ac3925a840854ef 157 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 24 138 3.2E-23 T 12-10-2018 IPR010181 CGCAxxGCC motif Amet_3720 a0fc169a44d7d54c4ac3925a840854ef 157 SUPERFAMILY SSF48695 25 142 3.39E-9 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily Amet_3720 a0fc169a44d7d54c4ac3925a840854ef 157 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 24 140 5.9E-25 T 12-10-2018 IPR010181 CGCAxxGCC motif Amet_3937 620ea6a49f1b6fac30d1e7bc00a096c4 323 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 18 318 4.7E-97 T 12-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 Amet_3937 620ea6a49f1b6fac30d1e7bc00a096c4 323 Gene3D G3DSA:3.40.50.300 2 246 1.1E-63 T 12-10-2018 Amet_3937 620ea6a49f1b6fac30d1e7bc00a096c4 323 Pfam PF00005 ABC transporter 27 170 1.8E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3937 620ea6a49f1b6fac30d1e7bc00a096c4 323 Pfam PF13732 Domain of unknown function (DUF4162) 225 315 3.8E-8 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 Amet_3937 620ea6a49f1b6fac30d1e7bc00a096c4 323 SMART SM00382 36 227 8.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3937 620ea6a49f1b6fac30d1e7bc00a096c4 323 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3937 620ea6a49f1b6fac30d1e7bc00a096c4 323 SUPERFAMILY SSF52540 9 233 9.27E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00097 Anthranilate synthase component II signature 71 82 5.2E-25 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00097 Anthranilate synthase component II signature 161 174 5.2E-25 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00097 Anthranilate synthase component II signature 96 104 5.2E-25 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00097 Anthranilate synthase component II signature 116 128 5.2E-25 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00097 Anthranilate synthase component II signature 44 53 5.2E-25 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 71 82 2.1E-13 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 44 53 2.1E-13 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 161 174 2.1E-13 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 41 55 1.7E-5 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 71 87 1.7E-5 T 12-10-2018 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 Gene3D G3DSA:3.40.50.880 1 187 1.8E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 182 4.7E-77 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 SUPERFAMILY SSF52317 1 184 1.02E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_2157 bf4b39b5ca0202383b1237adcb544ce9 196 Pfam PF00117 Glutamine amidotransferase class-I 1 184 6.2E-55 T 12-10-2018 IPR017926 Glutamine amidotransferase Amet_3452 d41ba8c66bad7ff18815ff72c5e139a1 371 Gene3D G3DSA:3.40.50.2000 190 351 8.9E-38 T 12-10-2018 Amet_3452 d41ba8c66bad7ff18815ff72c5e139a1 371 SUPERFAMILY SSF53756 21 367 2.72E-57 T 12-10-2018 Amet_3452 d41ba8c66bad7ff18815ff72c5e139a1 371 Pfam PF00534 Glycosyl transferases group 1 193 348 3.2E-31 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Amet_3452 d41ba8c66bad7ff18815ff72c5e139a1 371 Gene3D G3DSA:3.40.50.2000 2 189 6.3E-6 T 12-10-2018 Amet_2308 ddf1090fd049e5effec3edc365921831 113 Pfam PF01985 CRS1 / YhbY (CRM) domain 17 100 5.1E-21 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Amet_2308 ddf1090fd049e5effec3edc365921831 113 SUPERFAMILY SSF75471 16 109 1.07E-26 T 12-10-2018 IPR035920 YhbY-like superfamily Amet_2308 ddf1090fd049e5effec3edc365921831 113 Gene3D G3DSA:3.30.110.60 16 113 1.5E-31 T 12-10-2018 IPR035920 YhbY-like superfamily Amet_2308 ddf1090fd049e5effec3edc365921831 113 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 24 111 8.0E-23 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Amet_2308 ddf1090fd049e5effec3edc365921831 113 SMART SM01103 17 100 2.7E-36 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 SMART SM00279 174 209 2.4E-18 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 TIGRFAM TIGR00593 pola: DNA polymerase I 6 897 0.0 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Gene3D G3DSA:3.30.420.10 308 511 2.1E-45 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Gene3D G3DSA:1.20.1060.10 513 626 3.7E-45 T 12-10-2018 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Pfam PF00476 DNA polymerase family A 522 895 9.7E-158 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 SUPERFAMILY SSF88723 4 170 3.19E-54 T 12-10-2018 IPR029060 PIN-like domain superfamily Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 SUPERFAMILY SSF56672 492 897 3.22E-158 T 12-10-2018 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 SUPERFAMILY SSF53098 311 489 5.31E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 669 692 9.4E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 782 793 9.4E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 760 771 9.4E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 624 646 9.4E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 647 662 9.4E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 699 712 9.4E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 844 857 9.4E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 748 9.4E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 830 9.4E-77 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 SUPERFAMILY SSF47807 172 285 4.19E-35 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Gene3D G3DSA:1.10.150.20 175 248 2.6E-103 T 12-10-2018 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Gene3D G3DSA:3.40.50.1010 7 279 2.6E-103 T 12-10-2018 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 ProSitePatterns PS00447 DNA polymerase family A signature. 723 742 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Pfam PF01612 3'-5' exonuclease 310 483 9.1E-13 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Gene3D G3DSA:3.30.70.370 633 893 1.7E-107 T 12-10-2018 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Gene3D G3DSA:1.10.150.20 678 821 1.7E-107 T 12-10-2018 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 170 4.5E-53 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 SMART SM00482 655 861 7.5E-112 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 SMART SM00474 308 488 1.7E-13 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 SMART SM00475 4 263 3.4E-131 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Amet_3125 99db12bca8c87133c96aeeda2d59bebd 897 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 266 9.6E-35 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 4.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 4.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 4.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 467 4.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 SMART SM00388 247 315 7.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 465 1.1E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 310 1.1E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 SUPERFAMILY SSF55874 304 467 1.26E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 SUPERFAMILY SSF47384 234 314 2.16E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 SMART SM00387 361 467 2.1E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 Gene3D G3DSA:1.10.287.130 187 309 1.9E-16 T 12-10-2018 Amet_1692 97e2d8d4cfb582e1f375eadd98a5261c 467 Gene3D G3DSA:3.30.565.10 319 467 6.4E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0322 da2ce99507d2e7e0e25d66194b0cf166 322 SUPERFAMILY SSF56655 1 315 4.15E-105 T 12-10-2018 Amet_0322 da2ce99507d2e7e0e25d66194b0cf166 322 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 319 2.6E-128 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amet_0322 da2ce99507d2e7e0e25d66194b0cf166 322 Gene3D G3DSA:3.40.190.90 123 286 2.1E-132 T 12-10-2018 Amet_0322 da2ce99507d2e7e0e25d66194b0cf166 322 Gene3D G3DSA:3.30.540.10 5 312 2.1E-132 T 12-10-2018 Amet_0322 da2ce99507d2e7e0e25d66194b0cf166 322 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 312 1.2E-139 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amet_0322 da2ce99507d2e7e0e25d66194b0cf166 322 PIRSF PIRSF004532 1 322 7.8E-143 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amet_3619 fda5261f00ff03f6b3e61901c228158a 327 Gene3D G3DSA:3.40.50.1980 64 182 4.8E-36 T 12-10-2018 Amet_3619 fda5261f00ff03f6b3e61901c228158a 327 Pfam PF01497 Periplasmic binding protein 68 301 7.4E-39 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain Amet_3619 fda5261f00ff03f6b3e61901c228158a 327 SUPERFAMILY SSF53807 48 324 4.32E-65 T 12-10-2018 Amet_3619 fda5261f00ff03f6b3e61901c228158a 327 Gene3D G3DSA:3.40.50.1980 185 324 3.3E-36 T 12-10-2018 Amet_0513 4bc05de78735f4910e177e22a3e51afe 371 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 361 2.3E-64 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_0513 4bc05de78735f4910e177e22a3e51afe 371 Gene3D G3DSA:1.20.1740.10 4 370 6.0E-11 T 12-10-2018 Amet_0513 4bc05de78735f4910e177e22a3e51afe 371 Pfam PF03845 Spore germination protein 10 326 2.9E-58 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_4030 1795bfd1cf9e95c0895c3a18bc8ca04f 419 Pfam PF04860 Phage portal protein 48 382 1.5E-118 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein Amet_4030 1795bfd1cf9e95c0895c3a18bc8ca04f 419 Gene3D G3DSA:1.20.1270.210 41 322 2.4E-10 T 12-10-2018 Amet_4030 1795bfd1cf9e95c0895c3a18bc8ca04f 419 Gene3D G3DSA:3.30.1120.70 218 267 2.4E-10 T 12-10-2018 Amet_4030 1795bfd1cf9e95c0895c3a18bc8ca04f 419 Gene3D G3DSA:2.40.500.30 64 184 2.4E-10 T 12-10-2018 Amet_4030 1795bfd1cf9e95c0895c3a18bc8ca04f 419 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 38 387 1.8E-97 T 12-10-2018 IPR006427 Phage portal protein, HK97 Amet_3795 2f238a53598d57662b145dbaa28e6f05 392 Pfam PF00480 ROK family 86 379 1.1E-51 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amet_3795 2f238a53598d57662b145dbaa28e6f05 392 Pfam PF13412 Winged helix-turn-helix DNA-binding 17 60 8.2E-7 T 12-10-2018 Amet_3795 2f238a53598d57662b145dbaa28e6f05 392 Gene3D G3DSA:1.10.10.10 2 78 3.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3795 2f238a53598d57662b145dbaa28e6f05 392 SUPERFAMILY SSF46785 11 76 7.06E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3795 2f238a53598d57662b145dbaa28e6f05 392 Gene3D G3DSA:3.30.420.40 208 364 5.5E-70 T 12-10-2018 Amet_3795 2f238a53598d57662b145dbaa28e6f05 392 SUPERFAMILY SSF53067 86 382 1.05E-47 T 12-10-2018 Amet_3795 2f238a53598d57662b145dbaa28e6f05 392 Gene3D G3DSA:3.30.420.40 84 381 5.5E-70 T 12-10-2018 Amet_2347 b94c0253b64d0468f41e5c9d07f801ce 170 SUPERFAMILY SSF51161 8 168 1.04E-48 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_2347 b94c0253b64d0468f41e5c9d07f801ce 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 89 121 1.3E-9 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_2347 b94c0253b64d0468f41e5c9d07f801ce 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 44 2.3E-5 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_2347 b94c0253b64d0468f41e5c9d07f801ce 170 Gene3D G3DSA:2.160.10.10 1 170 2.9E-64 T 12-10-2018 Amet_0703 615314a8ae6f600b9c993c0e89fbe141 307 Gene3D G3DSA:3.40.1790.10 4 307 2.5E-138 T 12-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Amet_0703 615314a8ae6f600b9c993c0e89fbe141 307 SUPERFAMILY SSF110581 6 304 1.02E-117 T 12-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Amet_0703 615314a8ae6f600b9c993c0e89fbe141 307 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 12 305 44.516 T 12-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Amet_0703 615314a8ae6f600b9c993c0e89fbe141 307 Pfam PF04227 Indigoidine synthase A like protein 13 302 1.4E-134 T 12-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 441 588 1.4E-30 T 12-10-2018 IPR000160 GGDEF domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 317 438 2.3E-20 T 12-10-2018 IPR000014 PAS domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 152 1.1E-11 T 12-10-2018 IPR000014 PAS domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 193 313 9.8E-16 T 12-10-2018 IPR000014 PAS domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SUPERFAMILY SSF55785 180 304 1.5E-15 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Gene3D G3DSA:3.30.450.20 19 180 8.3E-18 T 12-10-2018 Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Gene3D G3DSA:3.30.450.20 310 440 2.1E-23 T 12-10-2018 Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Gene3D G3DSA:3.30.450.20 189 304 3.4E-16 T 12-10-2018 Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Gene3D G3DSA:3.30.70.270 441 599 3.8E-38 T 12-10-2018 Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SUPERFAMILY SSF109604 589 774 7.99E-40 T 12-10-2018 Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SUPERFAMILY SSF55785 34 147 5.41E-14 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SMART SM00091 29 100 13.0 T 12-10-2018 IPR000014 PAS domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SMART SM00091 195 261 0.0019 T 12-10-2018 IPR000014 PAS domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SMART SM00091 319 385 1.6E-8 T 12-10-2018 IPR000014 PAS domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Pfam PF00990 Diguanylate cyclase, GGDEF domain 444 588 4.4E-34 T 12-10-2018 IPR000160 GGDEF domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Pfam PF13426 PAS domain 329 429 2.4E-10 T 12-10-2018 IPR000014 PAS domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Pfam PF13426 PAS domain 207 302 1.3E-9 T 12-10-2018 IPR000014 PAS domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Pfam PF13426 PAS domain 45 143 1.9E-5 T 12-10-2018 IPR000014 PAS domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SUPERFAMILY SSF55073 448 588 7.45E-33 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SMART SM00267 432 597 2.8E-43 T 12-10-2018 IPR000160 GGDEF domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SMART SM00086 103 145 0.0026 T 12-10-2018 IPR001610 PAC motif Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SMART SM00086 391 432 27.0 T 12-10-2018 IPR001610 PAC motif Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Gene3D G3DSA:1.10.3210.10 600 775 1.1E-65 T 12-10-2018 Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SMART SM00471 609 744 5.4E-8 T 12-10-2018 IPR003607 HD/PDEase domain Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 SUPERFAMILY SSF55785 324 435 1.08E-19 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3483 9a50f8b7b5e5c1e2faa2c1d9fbf85b33 775 Pfam PF13487 HD domain 664 726 1.9E-19 T 12-10-2018 Amet_3672 80511a544b6306edeef20499f59e30d7 243 Pfam PF01479 S4 domain 5 50 1.4E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_3672 80511a544b6306edeef20499f59e30d7 243 Pfam PF00849 RNA pseudouridylate synthase 66 199 8.4E-20 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_3672 80511a544b6306edeef20499f59e30d7 243 Gene3D G3DSA:3.30.70.1560 133 216 1.0E-55 T 12-10-2018 Amet_3672 80511a544b6306edeef20499f59e30d7 243 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Amet_3672 80511a544b6306edeef20499f59e30d7 243 SMART SM00363 5 63 5.0E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_3672 80511a544b6306edeef20499f59e30d7 243 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 230 4.0E-47 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Amet_3672 80511a544b6306edeef20499f59e30d7 243 Gene3D G3DSA:3.10.290.10 1 63 8.3E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_3672 80511a544b6306edeef20499f59e30d7 243 SUPERFAMILY SSF55120 65 234 7.92E-42 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_3672 80511a544b6306edeef20499f59e30d7 243 Gene3D G3DSA:3.30.70.580 66 234 1.0E-55 T 12-10-2018 Amet_3672 80511a544b6306edeef20499f59e30d7 243 SUPERFAMILY SSF55174 6 63 1.39E-12 T 12-10-2018 Amet_3080 e6be2d947569c40a9d216317da72f205 359 Gene3D G3DSA:2.40.30.170 47 358 2.8E-22 T 12-10-2018 Amet_3080 e6be2d947569c40a9d216317da72f205 359 Gene3D G3DSA:2.40.50.100 57 281 2.8E-22 T 12-10-2018 Amet_3080 e6be2d947569c40a9d216317da72f205 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 214 350 4.5E-8 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Amet_3080 e6be2d947569c40a9d216317da72f205 359 Gene3D G3DSA:1.10.287.470 91 245 2.8E-22 T 12-10-2018 Amet_1360 927f1245e5eea0effbd9a27458c892ce 256 Pfam PF07136 Protein of unknown function (DUF1385) 71 232 5.6E-19 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 Amet_1360 927f1245e5eea0effbd9a27458c892ce 256 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 116 228 5.0E-48 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 Amet_0567 4c09aa3caf7da5870aeb542df70c0b4b 353 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 317 2.9E-73 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_0567 4c09aa3caf7da5870aeb542df70c0b4b 353 TIGRFAM TIGR00260 thrC: threonine synthase 7 323 6.6E-96 T 12-10-2018 IPR004450 Threonine synthase-like Amet_0567 4c09aa3caf7da5870aeb542df70c0b4b 353 SUPERFAMILY SSF53686 11 326 7.99E-104 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_0567 4c09aa3caf7da5870aeb542df70c0b4b 353 Gene3D G3DSA:3.40.50.1100 59 155 4.2E-122 T 12-10-2018 Amet_0567 4c09aa3caf7da5870aeb542df70c0b4b 353 PIRSF PIRSF038945 1 346 2.2E-156 T 12-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Amet_0567 4c09aa3caf7da5870aeb542df70c0b4b 353 Gene3D G3DSA:3.40.50.1100 14 323 4.2E-122 T 12-10-2018 Amet_0567 4c09aa3caf7da5870aeb542df70c0b4b 353 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 304 1.2E-103 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 5 307 35.095 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 Gene3D G3DSA:3.40.50.1370 133 292 3.7E-107 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 145 4.0E-44 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 303 1.0E-28 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 SUPERFAMILY SSF53671 2 306 1.01E-97 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 78 87 2.0E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 2.0E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 2.0E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 225 234 2.0E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 2.0E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 132 149 2.0E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 Gene3D G3DSA:3.40.50.1370 6 303 3.7E-107 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 2.0E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.0E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.0E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_4200 8d4350da876c152cd82cdc0b81437235 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.0E-23 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Amet_1828 b13ea3004c9832eacc4f7952670f82d0 357 PIRSF PIRSF005508 2 357 8.5E-129 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Amet_1828 b13ea3004c9832eacc4f7952670f82d0 357 Pfam PF01758 Sodium Bile acid symporter family 58 255 1.3E-43 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Amet_1828 b13ea3004c9832eacc4f7952670f82d0 357 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 14 342 1.8E-114 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Amet_1828 b13ea3004c9832eacc4f7952670f82d0 357 Gene3D G3DSA:1.20.1530.20 10 344 5.2E-27 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.4E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.4E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 Pfam PF13377 Periplasmic binding protein-like domain 167 329 7.9E-35 T 12-10-2018 Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 SMART SM00354 2 72 7.4E-37 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 Gene3D G3DSA:3.40.50.2300 159 289 3.9E-87 T 12-10-2018 Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 8.0E-21 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 Gene3D G3DSA:3.40.50.2300 63 308 3.9E-87 T 12-10-2018 Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 SUPERFAMILY SSF47413 3 60 1.3E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 SUPERFAMILY SSF53822 61 328 2.36E-88 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_1065 0470fe110acba76dd0c2df4bc96ca109 329 Gene3D G3DSA:1.10.260.40 4 60 9.1E-26 T 12-10-2018 Amet_0071 4f75875e81f23cd3f749efdd0fba5958 206 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 189 2.1E-24 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amet_0071 4f75875e81f23cd3f749efdd0fba5958 206 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 6 201 2.9E-54 T 12-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 Amet_0071 4f75875e81f23cd3f749efdd0fba5958 206 SUPERFAMILY SSF53790 3 205 9.16E-38 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amet_0071 4f75875e81f23cd3f749efdd0fba5958 206 Gene3D G3DSA:3.40.1010.10 1 104 1.9E-22 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 Gene3D G3DSA:3.90.1530.30 36 91 3.6E-8 T 12-10-2018 Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 Pfam PF02195 ParB-like nuclease domain 24 106 5.8E-13 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 SUPERFAMILY SSF110849 20 134 7.32E-28 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 SMART SM00470 22 107 5.9E-15 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 Gene3D G3DSA:3.40.50.150 182 397 1.4E-45 T 12-10-2018 Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 PIRSF PIRSF036758 19 423 7.7E-161 T 12-10-2018 IPR015840 DNA methyase, ParB domain-containing Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 202 216 3.7E-14 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 335 352 3.7E-14 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 377 397 3.7E-14 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 354 372 3.7E-14 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 Pfam PF01555 DNA methylase 204 393 4.0E-24 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 SUPERFAMILY SSF53335 171 404 2.07E-57 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2582 9b547d72d561bb7d7b72c87392fc8b37 424 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amet_0956 e27a498d53df3fde5eac54326c9fbdc3 255 Pfam PF03725 3' exoribonuclease family, domain 2 159 225 2.4E-14 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_0956 e27a498d53df3fde5eac54326c9fbdc3 255 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 3.1E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_0956 e27a498d53df3fde5eac54326c9fbdc3 255 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site Amet_0956 e27a498d53df3fde5eac54326c9fbdc3 255 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 237 4.0E-116 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Amet_0956 e27a498d53df3fde5eac54326c9fbdc3 255 SUPERFAMILY SSF55666 154 244 4.06E-24 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_0956 e27a498d53df3fde5eac54326c9fbdc3 255 Hamap MF_00564 Ribonuclease PH [rph]. 12 238 43.041 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Amet_0956 e27a498d53df3fde5eac54326c9fbdc3 255 SUPERFAMILY SSF54211 3 182 3.49E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_0956 e27a498d53df3fde5eac54326c9fbdc3 255 Gene3D G3DSA:3.30.230.70 10 238 3.9E-65 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_0587 eefb8ff5c39beb55a0b470051b50027c 498 SUPERFAMILY SSF52540 253 485 7.94E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0587 eefb8ff5c39beb55a0b470051b50027c 498 SUPERFAMILY SSF52540 6 229 1.82E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0587 eefb8ff5c39beb55a0b470051b50027c 498 Gene3D G3DSA:3.40.50.300 1 240 3.2E-54 T 12-10-2018 Amet_0587 eefb8ff5c39beb55a0b470051b50027c 498 Gene3D G3DSA:3.40.50.300 257 497 7.2E-43 T 12-10-2018 Amet_0587 eefb8ff5c39beb55a0b470051b50027c 498 SMART SM00382 280 481 7.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0587 eefb8ff5c39beb55a0b470051b50027c 498 SMART SM00382 31 220 4.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0587 eefb8ff5c39beb55a0b470051b50027c 498 Pfam PF00005 ABC transporter 22 172 4.7E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0587 eefb8ff5c39beb55a0b470051b50027c 498 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0587 eefb8ff5c39beb55a0b470051b50027c 498 Pfam PF00005 ABC transporter 272 425 2.0E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 Gene3D G3DSA:3.30.750.44 67 349 1.2E-96 T 12-10-2018 Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 SMART SM00245 188 374 6.1E-73 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 Pfam PF13180 PDZ domain 114 194 1.8E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 SMART SM00228 114 186 2.0E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 SUPERFAMILY SSF52096 61 380 2.49E-77 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 70 379 5.6E-108 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 Gene3D G3DSA:2.30.42.10 114 202 1.2E-96 T 12-10-2018 Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 Gene3D G3DSA:3.90.226.10 203 371 1.2E-96 T 12-10-2018 Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 SUPERFAMILY SSF50156 103 197 5.44E-18 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Amet_4128 3ff180c6be8d532e3b1e95bb8d75d4d6 405 Pfam PF03572 Peptidase family S41 213 372 9.2E-58 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Amet_1617 6bcaaa402e56c2e1fbf04ea9b6be6491 254 Gene3D G3DSA:3.20.20.370 35 242 3.2E-67 T 12-10-2018 Amet_1617 6bcaaa402e56c2e1fbf04ea9b6be6491 254 Pfam PF01522 Polysaccharide deacetylase 51 171 1.0E-35 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Amet_1617 6bcaaa402e56c2e1fbf04ea9b6be6491 254 SUPERFAMILY SSF88713 42 238 3.11E-64 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 77 622 6.5E-179 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00941 Cadmium-transporting ATPase signature 193 209 6.5E-22 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00941 Cadmium-transporting ATPase signature 132 148 6.5E-22 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00941 Cadmium-transporting ATPase signature 58 70 6.5E-22 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00941 Cadmium-transporting ATPase signature 112 132 6.5E-22 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00941 Cadmium-transporting ATPase signature 212 226 6.5E-22 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 SUPERFAMILY SSF56784 318 619 4.34E-51 T 12-10-2018 IPR036412 HAD-like superfamily Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 Gene3D G3DSA:3.40.50.1000 300 572 1.5E-89 T 12-10-2018 IPR023214 HAD superfamily Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 76 623 3.7E-132 T 12-10-2018 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 Pfam PF00122 E1-E2 ATPase 128 299 1.1E-52 T 12-10-2018 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 Gene3D G3DSA:2.70.150.20 115 231 6.3E-37 T 12-10-2018 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 SUPERFAMILY SSF81653 130 226 7.98E-26 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 Pfam PF00702 haloacid dehalogenase-like hydrolase 315 534 1.9E-42 T 12-10-2018 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 100 600 7.2E-92 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 SUPERFAMILY SSF81665 62 624 7.72E-19 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 Gene3D G3DSA:3.40.1110.10 330 451 1.5E-89 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 467 477 1.9E-24 T 12-10-2018 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 539 1.9E-24 T 12-10-2018 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 319 333 1.9E-24 T 12-10-2018 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 444 455 1.9E-24 T 12-10-2018 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 177 191 1.9E-24 T 12-10-2018 Amet_3997 e2cc92eb6fec1a7cac7236c684ec3e00 636 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 544 556 1.9E-24 T 12-10-2018 Amet_2943 cc3d61f532b108fadb0cb59227ce3431 663 Gene3D G3DSA:3.30.450.20 145 284 1.7E-22 T 12-10-2018 Amet_2943 cc3d61f532b108fadb0cb59227ce3431 663 SUPERFAMILY SSF103190 56 179 8.63E-6 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_2943 cc3d61f532b108fadb0cb59227ce3431 663 SMART SM00304 303 358 3.0E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2943 cc3d61f532b108fadb0cb59227ce3431 663 SMART SM00283 387 662 1.4E-53 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2943 cc3d61f532b108fadb0cb59227ce3431 663 Gene3D G3DSA:1.10.287.950 336 662 5.2E-61 T 12-10-2018 Amet_2943 cc3d61f532b108fadb0cb59227ce3431 663 SUPERFAMILY SSF58104 334 662 2.22E-66 T 12-10-2018 Amet_2943 cc3d61f532b108fadb0cb59227ce3431 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 456 594 3.5E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2943 cc3d61f532b108fadb0cb59227ce3431 663 Pfam PF02743 Cache domain 42 266 2.5E-28 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 137 360 6.4E-39 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Pfam PF04539 Sigma-70 region 3 218 294 6.4E-32 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Pfam PF00140 Sigma-70 factor, region 1.2 101 134 6.0E-17 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Pfam PF03979 Sigma-70 factor, region 1.1 8 80 6.5E-19 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Gene3D G3DSA:1.10.10.10 212 287 1.6E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 SUPERFAMILY SSF88946 100 209 1.57E-53 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 135 372 4.1E-124 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 372 34.754 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Gene3D G3DSA:1.10.601.10 99 133 1.2E-9 T 12-10-2018 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Gene3D G3DSA:1.10.601.10 134 211 1.0E-51 T 12-10-2018 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 SUPERFAMILY SSF88659 269 371 4.11E-31 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 SUPERFAMILY SSF88659 212 286 3.24E-23 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Pfam PF04542 Sigma-70 region 2 139 208 9.3E-23 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Pfam PF04545 Sigma-70, region 4 307 360 1.6E-20 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Gene3D G3DSA:1.10.10.10 289 372 8.1E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 163 176 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 332 358 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 PRINTS PR00046 Major sigma-70 factor signature 187 195 5.2E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 PRINTS PR00046 Major sigma-70 factor signature 332 347 5.2E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 PRINTS PR00046 Major sigma-70 factor signature 163 176 5.2E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 PRINTS PR00046 Major sigma-70 factor signature 311 323 5.2E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 PRINTS PR00046 Major sigma-70 factor signature 347 358 5.2E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2993 543d70d37b6f0021ea6cbdd72a9d0bd7 372 Gene3D G3DSA:1.10.220.120 4 67 3.0E-14 T 12-10-2018 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 Pfam PF14697 4Fe-4S dicluster domain 529 580 4.2E-9 T 12-10-2018 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 Gene3D G3DSA:3.40.30.10 4 94 2.5E-10 T 12-10-2018 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 564 575 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3095 a84e5421f7a672abd50787ddccf21409 582 SMART SM00928 425 470 3.3E-21 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 Gene3D G3DSA:1.20.1440.230 423 524 1.9E-33 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 426 510 8.9E-32 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 SUPERFAMILY SSF54862 529 581 1.45E-14 T 12-10-2018 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 144 315 8.3E-50 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 Gene3D G3DSA:3.40.50.11540 149 327 1.7E-80 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 SUPERFAMILY SSF142019 98 336 7.98E-91 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 SUPERFAMILY SSF52833 3 94 7.49E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_3095 a84e5421f7a672abd50787ddccf21409 582 Pfam PF10531 SLBB domain 339 387 2.9E-6 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 Gene3D G3DSA:3.10.20.600 328 422 8.8E-29 T 12-10-2018 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 SUPERFAMILY SSF142984 337 420 1.7E-23 T 12-10-2018 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 SUPERFAMILY SSF140490 421 523 6.67E-37 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3095 a84e5421f7a672abd50787ddccf21409 582 Gene3D G3DSA:3.30.70.20 527 581 3.8E-13 T 12-10-2018 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 SUPERFAMILY SSF46689 157 205 2.1E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 SMART SM00342 171 254 1.4E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 Pfam PF12833 Helix-turn-helix domain 177 255 3.2E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 Pfam PF00072 Response regulator receiver domain 7 119 6.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 SUPERFAMILY SSF46689 207 257 1.11E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 Gene3D G3DSA:3.40.50.2300 1 140 2.4E-33 T 12-10-2018 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 SMART SM00448 5 119 2.0E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 SUPERFAMILY SSF52172 2 128 1.31E-31 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3321 782bf42074d3272f4f74c3141deee19d 263 Gene3D G3DSA:1.10.10.60 154 203 5.2E-15 T 12-10-2018 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 250 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 Gene3D G3DSA:1.10.10.60 204 259 9.3E-20 T 12-10-2018 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 1.2E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3321 782bf42074d3272f4f74c3141deee19d 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 1.2E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3744 b6bd505d625e8bd75bd15424fdc09693 714 Gene3D G3DSA:3.40.630.10 361 696 3.7E-38 T 12-10-2018 Amet_3744 b6bd505d625e8bd75bd15424fdc09693 714 SUPERFAMILY SSF52440 15 114 4.32E-10 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_3744 b6bd505d625e8bd75bd15424fdc09693 714 Pfam PF07478 D-ala D-ala ligase C-terminus 124 320 2.5E-40 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_3744 b6bd505d625e8bd75bd15424fdc09693 714 Gene3D G3DSA:3.30.70.360 523 630 3.7E-38 T 12-10-2018 Amet_3744 b6bd505d625e8bd75bd15424fdc09693 714 Gene3D G3DSA:3.30.470.20 103 325 5.4E-64 T 12-10-2018 Amet_3744 b6bd505d625e8bd75bd15424fdc09693 714 SUPERFAMILY SSF56059 114 323 3.03E-46 T 12-10-2018 Amet_3744 b6bd505d625e8bd75bd15424fdc09693 714 Gene3D G3DSA:3.30.1490.20 129 193 5.4E-64 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_3744 b6bd505d625e8bd75bd15424fdc09693 714 SUPERFAMILY SSF53187 345 711 1.26E-21 T 12-10-2018 Amet_3744 b6bd505d625e8bd75bd15424fdc09693 714 Pfam PF01546 Peptidase family M20/M25/M40 428 700 1.3E-9 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_1461 b857a41fc6edfbe2d0d14add82f5d350 133 Pfam PF00578 AhpC/TSA family 2 65 1.1E-11 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amet_1461 b857a41fc6edfbe2d0d14add82f5d350 133 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 87 117 1.2E-5 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amet_1461 b857a41fc6edfbe2d0d14add82f5d350 133 SUPERFAMILY SSF52833 2 125 1.62E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_1461 b857a41fc6edfbe2d0d14add82f5d350 133 Gene3D G3DSA:3.40.30.10 1 125 4.2E-33 T 12-10-2018 Amet_3072 2b33eea9fe88cd888509dfe6e8cf0477 175 SUPERFAMILY SSF101307 11 162 1.22E-50 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 Amet_3072 2b33eea9fe88cd888509dfe6e8cf0477 175 Gene3D G3DSA:1.10.3760.10 5 174 2.2E-65 T 12-10-2018 Amet_3072 2b33eea9fe88cd888509dfe6e8cf0477 175 Pfam PF04608 Phosphatidylglycerophosphatase A 23 160 1.1E-24 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 Amet_3072 2b33eea9fe88cd888509dfe6e8cf0477 175 PIRSF PIRSF019587 7 170 7.4E-70 T 12-10-2018 IPR026038 Putative phosphatidylglycerophosphatase Amet_1297 3471cf7b78fe7431019fdb41a50135a8 164 SUPERFAMILY SSF52141 7 161 1.7E-35 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_1297 3471cf7b78fe7431019fdb41a50135a8 164 Pfam PF03167 Uracil DNA glycosylase superfamily 11 154 9.9E-11 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_1297 3471cf7b78fe7431019fdb41a50135a8 164 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 6 155 2.4E-53 T 12-10-2018 IPR026353 Hypoxanthine-DNA glycosylase Amet_1297 3471cf7b78fe7431019fdb41a50135a8 164 SMART SM00986 8 159 0.003 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_1297 3471cf7b78fe7431019fdb41a50135a8 164 SMART SM00987 8 159 0.003 T 12-10-2018 Amet_1297 3471cf7b78fe7431019fdb41a50135a8 164 Gene3D G3DSA:3.40.470.10 3 163 2.5E-58 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Amet_2890 71382bcc05b4ece6c686f51978233fa8 245 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 129 141 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amet_2890 71382bcc05b4ece6c686f51978233fa8 245 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 241 17.502 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amet_2890 71382bcc05b4ece6c686f51978233fa8 245 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 237 1.1E-66 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amet_2890 71382bcc05b4ece6c686f51978233fa8 245 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 234 1.7E-77 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amet_2764 9bdca68a0adfd4171f7b48f9784f18fb 424 Hamap MF_01539 UPF0348 protein . 2 419 36.231 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 Amet_2764 9bdca68a0adfd4171f7b48f9784f18fb 424 SUPERFAMILY SSF52374 10 247 3.66E-16 T 12-10-2018 Amet_2764 9bdca68a0adfd4171f7b48f9784f18fb 424 Pfam PF05636 HIGH Nucleotidyl Transferase 1 405 1.7E-140 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 Amet_2764 9bdca68a0adfd4171f7b48f9784f18fb 424 Gene3D G3DSA:3.40.50.620 1 147 7.6E-40 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3384 d9c25c33d343df2541bb222292fe12d2 151 Gene3D G3DSA:2.170.150.20 3 151 1.8E-59 T 12-10-2018 Amet_3384 d9c25c33d343df2541bb222292fe12d2 151 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 134 36.501 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Amet_3384 d9c25c33d343df2541bb222292fe12d2 151 Pfam PF01641 SelR domain 13 133 5.6E-49 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Amet_3384 d9c25c33d343df2541bb222292fe12d2 151 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 142 3.0E-63 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Amet_3384 d9c25c33d343df2541bb222292fe12d2 151 SUPERFAMILY SSF51316 7 149 4.92E-60 T 12-10-2018 IPR011057 Mss4-like superfamily Amet_4453 52c28e499a960c57147206b4fd1437b6 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 12-10-2018 Amet_4453 52c28e499a960c57147206b4fd1437b6 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.624 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4453 52c28e499a960c57147206b4fd1437b6 37 Pfam PF00444 Ribosomal protein L36 1 37 4.7E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4453 52c28e499a960c57147206b4fd1437b6 37 SUPERFAMILY SSF57840 1 37 7.85E-17 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4453 52c28e499a960c57147206b4fd1437b6 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4453 52c28e499a960c57147206b4fd1437b6 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.3E-24 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 Gene3D G3DSA:1.10.1420.10 64 278 3.7E-6 T 12-10-2018 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 788 20.768 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 SMART SM00534 327 512 9.6E-78 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 Pfam PF01713 Smr domain 714 789 2.5E-15 T 12-10-2018 IPR002625 Smr domain Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 Gene3D G3DSA:1.10.1420.10 137 258 3.7E-6 T 12-10-2018 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 SUPERFAMILY SSF52540 293 513 4.5E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 PIRSF PIRSF005814 1 789 5.3E-257 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 Gene3D G3DSA:3.40.50.300 293 599 1.1E-83 T 12-10-2018 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 SMART SM00463 711 789 4.8E-9 T 12-10-2018 IPR002625 Smr domain Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 409 425 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 SMART SM00533 9 314 7.1E-29 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 789 2.5E-219 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 SUPERFAMILY SSF160443 713 789 1.83E-7 T 12-10-2018 IPR036063 Smr domain superfamily Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 SUPERFAMILY SSF48334 21 287 3.14E-24 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 Pfam PF00488 MutS domain V 330 512 3.3E-38 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_1712 2b1bea572cb1cb154bbf0d4030957145 789 Gene3D G3DSA:3.30.1370.110 702 789 1.5E-19 T 12-10-2018 Amet_0662 1ea429c56badeda8d1c7646cff745083 336 Gene3D G3DSA:3.80.30.30 111 336 1.5E-80 T 12-10-2018 Amet_0662 1ea429c56badeda8d1c7646cff745083 336 Gene3D G3DSA:3.40.50.12110 2 110 5.3E-35 T 12-10-2018 Amet_0662 1ea429c56badeda8d1c7646cff745083 336 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 4 336 8.9E-154 T 12-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 Amet_2908 ff12f784fa969a003c5fdcb7e48df96b 309 SUPERFAMILY SSF161098 92 287 2.18E-19 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2908 ff12f784fa969a003c5fdcb7e48df96b 309 Gene3D G3DSA:1.10.3720.10 88 301 1.0E-24 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2908 ff12f784fa969a003c5fdcb7e48df96b 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 305 3.8E-44 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 Hamap MF_00533 Nitrogenase iron protein [nifH]. 1 272 53.895 T 12-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 2 269 7.4E-132 T 12-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 ProSitePatterns PS00746 NifH/frxC family signature 1. 84 96 - T 12-10-2018 IPR030655 NifH/chlL conserved site Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 2 270 2.6E-140 T 12-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 SUPERFAMILY SSF52540 1 268 1.63E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 PIRSF PIRSF000363 1 271 2.9E-124 T 12-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 PRINTS PR00091 Nitrogenase component II signature 121 136 7.0E-38 T 12-10-2018 Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 PRINTS PR00091 Nitrogenase component II signature 82 96 7.0E-38 T 12-10-2018 Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 PRINTS PR00091 Nitrogenase component II signature 7 20 7.0E-38 T 12-10-2018 Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 PRINTS PR00091 Nitrogenase component II signature 29 44 7.0E-38 T 12-10-2018 Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 ProSitePatterns PS00692 NifH/frxC family signature 2. 122 135 - T 12-10-2018 IPR030655 NifH/chlL conserved site Amet_3524 1c2bbb97a595c4ef6a2d5c6a6fb6b9a1 272 Gene3D G3DSA:3.40.50.300 1 269 8.4E-70 T 12-10-2018 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 SUPERFAMILY SSF47384 243 323 3.73E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 SMART SM00304 196 248 1.8E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 Gene3D G3DSA:1.10.287.130 252 323 5.5E-20 T 12-10-2018 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 370 480 9.1E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 Gene3D G3DSA:1.20.1480.50 163 251 1.8E-10 T 12-10-2018 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 SMART SM00387 369 482 1.1E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 SUPERFAMILY SSF158472 196 246 4.97E-8 T 12-10-2018 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 4.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 4.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 4.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 4.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 Pfam PF00672 HAMP domain 196 244 1.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 321 6.7E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 Gene3D G3DSA:3.30.565.10 334 493 1.4E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 SMART SM00388 256 323 1.8E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_0655 945ad5af4fccadb2800e303e2a15c77b 496 SUPERFAMILY SSF55874 313 483 6.29E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 272 278 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 Pfam PF02384 N-6 DNA Methylase 137 454 2.8E-96 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 308 332 2.1E-13 T 12-10-2018 Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 176 2.1E-13 T 12-10-2018 Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 191 205 2.1E-13 T 12-10-2018 Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 269 281 2.1E-13 T 12-10-2018 Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 SUPERFAMILY SSF53335 6 494 3.03E-111 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 Pfam PF12161 HsdM N-terminal domain 8 113 9.3E-13 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 Gene3D G3DSA:3.40.50.150 137 441 4.9E-86 T 12-10-2018 Amet_4058 a1165df4ee7902dfaa2b25bfd34d4346 897 Gene3D G3DSA:1.20.1260.30 1 88 1.9E-15 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 Gene3D G3DSA:3.30.950.10 120 271 2.9E-53 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 SUPERFAMILY SSF69618 255 500 3.53E-70 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 SUPERFAMILY SSF53790 2 256 1.2E-77 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 216 4.2E-49 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 Gene3D G3DSA:3.40.1010.10 2 119 6.0E-44 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 Pfam PF02602 Uroporphyrinogen-III synthase HemD 268 496 6.3E-65 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 PIRSF PIRSF036426 1 257 9.7E-102 T 12-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 Gene3D G3DSA:3.40.50.10090 286 419 1.2E-30 T 12-10-2018 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 Gene3D G3DSA:3.40.50.10090 427 502 9.7E-16 T 12-10-2018 Amet_0061 2e0e543cf3da6aa6d403841feeaef0f0 502 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 241 5.7E-96 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 Pfam PF00696 Amino acid kinase family 2 229 1.7E-48 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 PIRSF PIRSF000726 54 405 1.5E-106 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 PIRSF PIRSF000726 1 60 3.1E-19 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 SUPERFAMILY SSF55021 251 346 2.06E-12 T 12-10-2018 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 Gene3D G3DSA:3.40.1160.10 1 253 3.1E-85 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 400 1.6E-101 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 Pfam PF13840 ACT domain 335 394 3.9E-8 T 12-10-2018 IPR027795 CASTOR, ACT domain Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 Gene3D G3DSA:3.30.70.260 254 402 4.8E-38 T 12-10-2018 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 SUPERFAMILY SSF55021 335 403 3.44E-16 T 12-10-2018 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 Gene3D G3DSA:3.30.70.260 260 337 4.8E-38 T 12-10-2018 Amet_3194 ada44bb46b3a08af2bef3bcd0ec48db3 406 SUPERFAMILY SSF53633 3 241 1.83E-68 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_1240 706b3b66eaa50569cb844f009b3f78a4 246 Gene3D G3DSA:3.40.50.300 1 244 1.2E-74 T 12-10-2018 Amet_1240 706b3b66eaa50569cb844f009b3f78a4 246 Pfam PF00005 ABC transporter 17 168 9.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1240 706b3b66eaa50569cb844f009b3f78a4 246 PIRSF PIRSF039085 1 244 2.9E-109 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Amet_1240 706b3b66eaa50569cb844f009b3f78a4 246 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1240 706b3b66eaa50569cb844f009b3f78a4 246 SMART SM00382 26 216 2.6E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1240 706b3b66eaa50569cb844f009b3f78a4 246 SUPERFAMILY SSF52540 1 238 2.08E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2716 86402c4ef25d514dfaddf9160e2f3a57 441 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 361 439 1.5E-24 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Amet_2716 86402c4ef25d514dfaddf9160e2f3a57 441 Gene3D G3DSA:2.60.98.20 181 322 7.5E-16 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Amet_2716 86402c4ef25d514dfaddf9160e2f3a57 441 SUPERFAMILY SSF117143 91 401 1.26E-62 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Amet_2716 86402c4ef25d514dfaddf9160e2f3a57 441 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Amet_2716 86402c4ef25d514dfaddf9160e2f3a57 441 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 422 2.7E-90 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Amet_2716 86402c4ef25d514dfaddf9160e2f3a57 441 Pfam PF00460 Flagella basal body rod protein 8 35 8.4E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Amet_2716 86402c4ef25d514dfaddf9160e2f3a57 441 Pfam PF07559 Flagellar basal body protein FlaE 218 315 3.2E-10 T 12-10-2018 IPR011491 Flagellar hook protein FlgE Amet_4729 a91d5780bf33764a5de8f076c9bb5c26 218 Gene3D G3DSA:3.40.50.2300 1 122 5.0E-33 T 12-10-2018 Amet_4729 a91d5780bf33764a5de8f076c9bb5c26 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 214 1.3E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_4729 a91d5780bf33764a5de8f076c9bb5c26 218 Pfam PF00072 Response regulator receiver domain 4 111 1.7E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4729 a91d5780bf33764a5de8f076c9bb5c26 218 SUPERFAMILY SSF52172 1 175 6.49E-37 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4729 a91d5780bf33764a5de8f076c9bb5c26 218 SMART SM00862 142 214 6.3E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_4729 a91d5780bf33764a5de8f076c9bb5c26 218 SMART SM00448 2 110 2.9E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4729 a91d5780bf33764a5de8f076c9bb5c26 218 Gene3D G3DSA:1.10.10.10 123 218 9.6E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 SUPERFAMILY SSF100950 75 231 1.17E-37 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 1.1E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 SMART SM00420 6 58 4.4E-20 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 Gene3D G3DSA:1.10.10.10 1 56 2.3E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 SUPERFAMILY SSF46785 4 65 2.17E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 SMART SM01134 73 233 1.2E-79 T 12-10-2018 Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.5E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.5E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amet_0825 fbf22a7cc8bc54bac003e0f754e0c9f6 252 Pfam PF00455 DeoR C terminal sensor domain 76 231 1.8E-58 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain Amet_3388 eee9e47a1453b61036576011ba90d1a4 491 Pfam PF01425 Amidase 24 468 8.4E-165 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amet_3388 eee9e47a1453b61036576011ba90d1a4 491 ProSitePatterns PS00571 Amidases signature. 152 183 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Amet_3388 eee9e47a1453b61036576011ba90d1a4 491 SUPERFAMILY SSF75304 1 484 2.75E-167 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amet_3388 eee9e47a1453b61036576011ba90d1a4 491 Gene3D G3DSA:3.90.1300.10 1 485 8.2E-198 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amet_3388 eee9e47a1453b61036576011ba90d1a4 491 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 479 92.384 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amet_3388 eee9e47a1453b61036576011ba90d1a4 491 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 15 479 3.2E-191 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Amet_0554 6fecd070897ab2f91faf156b3e14c126 342 Gene3D G3DSA:3.40.50.720 150 285 3.1E-91 T 12-10-2018 Amet_0554 6fecd070897ab2f91faf156b3e14c126 342 Pfam PF00107 Zinc-binding dehydrogenase 173 298 3.2E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amet_0554 6fecd070897ab2f91faf156b3e14c126 342 SUPERFAMILY SSF50129 3 172 3.35E-42 T 12-10-2018 IPR011032 GroES-like superfamily Amet_0554 6fecd070897ab2f91faf156b3e14c126 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 132 5.5E-30 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amet_0554 6fecd070897ab2f91faf156b3e14c126 342 SUPERFAMILY SSF51735 140 304 1.21E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0554 6fecd070897ab2f91faf156b3e14c126 342 Gene3D G3DSA:3.90.180.10 15 323 3.1E-91 T 12-10-2018 Amet_3173 e12f206664184346f34802cd288809dd 308 SUPERFAMILY SSF55120 79 303 3.36E-66 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_3173 e12f206664184346f34802cd288809dd 308 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_3173 e12f206664184346f34802cd288809dd 308 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 21 302 9.4E-75 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_3173 e12f206664184346f34802cd288809dd 308 Pfam PF00849 RNA pseudouridylate synthase 94 244 2.1E-33 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_3173 e12f206664184346f34802cd288809dd 308 Gene3D G3DSA:3.30.2350.10 87 306 4.2E-67 T 12-10-2018 Amet_0103 9bae8791e68121fe7ff3dc3d1ca0db35 256 SUPERFAMILY SSF52172 13 145 1.57E-23 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0103 9bae8791e68121fe7ff3dc3d1ca0db35 256 SMART SM00448 15 129 6.5E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0103 9bae8791e68121fe7ff3dc3d1ca0db35 256 Gene3D G3DSA:3.40.50.2300 12 144 3.9E-24 T 12-10-2018 Amet_0103 9bae8791e68121fe7ff3dc3d1ca0db35 256 Pfam PF04397 LytTr DNA-binding domain 158 253 3.8E-20 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_0103 9bae8791e68121fe7ff3dc3d1ca0db35 256 Gene3D G3DSA:2.40.50.40 147 217 2.7E-16 T 12-10-2018 Amet_0103 9bae8791e68121fe7ff3dc3d1ca0db35 256 Pfam PF00072 Response regulator receiver domain 17 129 5.7E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0103 9bae8791e68121fe7ff3dc3d1ca0db35 256 SMART SM00850 156 255 1.4E-29 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_4317 2af722a982371b9c58fe9fb932149cc5 473 Gene3D G3DSA:3.40.640.10 86 334 8.1E-144 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_4317 2af722a982371b9c58fe9fb932149cc5 473 Pfam PF00202 Aminotransferase class-III 53 447 6.9E-102 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_4317 2af722a982371b9c58fe9fb932149cc5 473 SUPERFAMILY SSF53383 46 448 2.04E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_4317 2af722a982371b9c58fe9fb932149cc5 473 PIRSF PIRSF000521 46 154 4.8E-4 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_4317 2af722a982371b9c58fe9fb932149cc5 473 PIRSF PIRSF000521 187 450 2.0E-32 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_4317 2af722a982371b9c58fe9fb932149cc5 473 PIRSF PIRSF000521 149 186 0.72 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_4317 2af722a982371b9c58fe9fb932149cc5 473 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_4317 2af722a982371b9c58fe9fb932149cc5 473 Gene3D G3DSA:3.90.1150.10 28 445 8.1E-144 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3675 5d20466b7ba20b78af522fffe1d95a65 309 SUPERFAMILY SSF51569 3 301 3.66E-112 T 12-10-2018 Amet_3675 5d20466b7ba20b78af522fffe1d95a65 309 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 307 7.9E-107 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Amet_3675 5d20466b7ba20b78af522fffe1d95a65 309 PIRSF PIRSF001359 1 309 5.4E-108 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Amet_3675 5d20466b7ba20b78af522fffe1d95a65 309 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Amet_3675 5d20466b7ba20b78af522fffe1d95a65 309 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 307 4.2E-116 T 12-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Amet_3675 5d20466b7ba20b78af522fffe1d95a65 309 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 303 1.0E-97 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Amet_3675 5d20466b7ba20b78af522fffe1d95a65 309 Gene3D G3DSA:3.20.20.70 1 309 4.1E-132 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Gene3D G3DSA:3.50.50.60 188 297 1.3E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 SMART SM00926 685 739 2.0E-7 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 686 735 1.3E-9 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 SUPERFAMILY SSF53706 686 1123 3.66E-86 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Gene3D G3DSA:3.50.50.60 298 434 2.4E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Gene3D G3DSA:3.40.50.740 1029 1119 4.3E-19 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 193 482 2.0E-32 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Gene3D G3DSA:2.20.25.90 686 739 9.0E-13 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 656 667 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 PRINTS PR00419 Adrenodoxin reductase family signature 325 339 1.3E-19 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 PRINTS PR00419 Adrenodoxin reductase family signature 217 230 1.3E-19 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 PRINTS PR00419 Adrenodoxin reductase family signature 359 372 1.3E-19 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 PRINTS PR00419 Adrenodoxin reductase family signature 194 216 1.3E-19 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 PRINTS PR00419 Adrenodoxin reductase family signature 259 269 1.3E-19 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Gene3D G3DSA:3.30.70.20 593 674 1.5E-25 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 SUPERFAMILY SSF46548 99 202 2.3E-19 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Pfam PF00384 Molybdopterin oxidoreductase 742 1096 1.3E-34 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Pfam PF00037 4Fe-4S binding domain 653 671 6.3E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Gene3D G3DSA:1.10.1060.10 79 187 6.4E-26 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Gene3D G3DSA:3.40.50.740 747 1001 2.5E-39 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 1.0E-14 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Gene3D G3DSA:3.40.228.10 815 992 2.5E-39 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 SUPERFAMILY SSF54292 3 100 5.93E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 99 179 2.4E-18 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 SUPERFAMILY SSF51971 191 435 2.3E-66 T 12-10-2018 Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 Gene3D G3DSA:3.10.20.30 1 78 1.6E-5 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_3096 7ada0c02fabcda922162918dc9c2f550 1187 SUPERFAMILY SSF54862 558 674 1.76E-27 T 12-10-2018 Amet_1615 cc2aaa2dc80e38ed2788a16a0031be1e 308 Pfam PF02690 Na+/Pi-cotransporter 14 148 1.7E-37 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Amet_1615 cc2aaa2dc80e38ed2788a16a0031be1e 308 Pfam PF02690 Na+/Pi-cotransporter 142 244 1.0E-16 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 42 65 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 296 373 1.3E-10 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 Pfam PF08245 Mur ligase middle domain 44 270 4.4E-16 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 Gene3D G3DSA:3.40.1190.10 1 297 1.0E-102 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 SUPERFAMILY SSF53244 298 430 4.58E-30 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 Gene3D G3DSA:3.90.190.20 298 432 2.6E-36 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 SUPERFAMILY SSF53623 1 296 1.6E-90 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 427 7.3E-120 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 PIRSF PIRSF001563 1 434 6.5E-148 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Amet_1403 2d9dd727b49b330f2c7aa618002426d9 439 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 140 155 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Amet_3209 5ff18a72ae897c8905d792dc9a3d8512 225 SMART SM00448 4 114 1.1E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3209 5ff18a72ae897c8905d792dc9a3d8512 225 SUPERFAMILY SSF46894 123 222 1.21E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_3209 5ff18a72ae897c8905d792dc9a3d8512 225 SMART SM00862 148 221 4.3E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3209 5ff18a72ae897c8905d792dc9a3d8512 225 Gene3D G3DSA:3.40.50.2300 2 126 3.1E-39 T 12-10-2018 Amet_3209 5ff18a72ae897c8905d792dc9a3d8512 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 2.2E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3209 5ff18a72ae897c8905d792dc9a3d8512 225 Gene3D G3DSA:1.10.10.10 127 225 6.2E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3209 5ff18a72ae897c8905d792dc9a3d8512 225 Pfam PF00072 Response regulator receiver domain 6 115 1.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3209 5ff18a72ae897c8905d792dc9a3d8512 225 SUPERFAMILY SSF52172 3 129 4.41E-40 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4641 b1e6c78d42779713522c54237e5bfb61 205 Gene3D G3DSA:3.60.21.10 27 174 3.3E-9 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_4641 b1e6c78d42779713522c54237e5bfb61 205 Pfam PF00149 Calcineurin-like phosphoesterase 31 158 8.7E-8 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amet_4641 b1e6c78d42779713522c54237e5bfb61 205 SUPERFAMILY SSF56300 31 168 7.41E-15 T 12-10-2018 Amet_0319 a51dbd91e944837df8c83b0b0338688b 214 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Amet_0319 a51dbd91e944837df8c83b0b0338688b 214 SUPERFAMILY SSF51569 1 213 1.15E-79 T 12-10-2018 Amet_0319 a51dbd91e944837df8c83b0b0338688b 214 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 211 1.4E-58 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Amet_0319 a51dbd91e944837df8c83b0b0338688b 214 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 8.0E-97 T 12-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Amet_0319 a51dbd91e944837df8c83b0b0338688b 214 Hamap MF_00494 Probable transaldolase [tal]. 1 214 47.393 T 12-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Amet_0319 a51dbd91e944837df8c83b0b0338688b 214 Gene3D G3DSA:3.20.20.70 1 214 2.8E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0319 a51dbd91e944837df8c83b0b0338688b 214 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Amet_3828 85bb184756621bf64423182d37d1c68a 445 PIRSF PIRSF036408 1 442 2.1E-204 T 12-10-2018 IPR017054 Propanediol utilization protein, PduS, predicted Amet_3828 85bb184756621bf64423182d37d1c68a 445 SUPERFAMILY SSF142984 163 230 3.14E-8 T 12-10-2018 Amet_3828 85bb184756621bf64423182d37d1c68a 445 Pfam PF13534 4Fe-4S dicluster domain 253 313 2.9E-7 T 12-10-2018 Amet_3828 85bb184756621bf64423182d37d1c68a 445 SUPERFAMILY SSF142019 3 169 8.63E-44 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3828 85bb184756621bf64423182d37d1c68a 445 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 254 265 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3828 85bb184756621bf64423182d37d1c68a 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 7 152 7.4E-45 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3828 85bb184756621bf64423182d37d1c68a 445 Gene3D G3DSA:3.40.50.11540 12 159 1.3E-14 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3828 85bb184756621bf64423182d37d1c68a 445 SUPERFAMILY SSF46548 239 328 1.33E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_3828 85bb184756621bf64423182d37d1c68a 445 Pfam PF13375 RnfC Barrel sandwich hybrid domain 372 436 5.1E-16 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Amet_3828 85bb184756621bf64423182d37d1c68a 445 Pfam PF10531 SLBB domain 164 209 2.2E-6 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3570 494c4579c202a9d7fa03dd6d60c95b2f 157 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 1.2E-55 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Amet_3570 494c4579c202a9d7fa03dd6d60c95b2f 157 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 132 3.0E-56 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Amet_3570 494c4579c202a9d7fa03dd6d60c95b2f 157 SUPERFAMILY SSF74982 3 132 3.01E-52 T 12-10-2018 IPR023620 Small protein B Amet_3570 494c4579c202a9d7fa03dd6d60c95b2f 157 Gene3D G3DSA:2.40.280.10 2 129 9.1E-51 T 12-10-2018 IPR023620 Small protein B Amet_3570 494c4579c202a9d7fa03dd6d60c95b2f 157 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 72.061 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Amet_3570 494c4579c202a9d7fa03dd6d60c95b2f 157 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site Amet_3570 494c4579c202a9d7fa03dd6d60c95b2f 157 Pfam PF01668 SmpB protein 10 149 4.2E-60 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 Pfam PF00472 RF-1 domain 214 321 2.8E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 Gene3D G3DSA:3.30.160.20 210 297 1.2E-94 T 12-10-2018 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 Gene3D G3DSA:1.20.58.410 2 100 4.3E-6 T 12-10-2018 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 SMART SM00937 63 178 8.9E-64 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 Pfam PF03462 PCRF domain 8 203 5.4E-75 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 357 40.441 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 3.8E-163 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 Gene3D G3DSA:3.30.70.1660 111 342 1.2E-94 T 12-10-2018 Amet_0331 fd6ea195ce820c9bdecab089b900446b 357 SUPERFAMILY SSF75620 8 353 5.89E-136 T 12-10-2018 Amet_1174 50b76d74b2d03c89853991d7020532f9 276 SUPERFAMILY SSF81345 4 259 7.06E-35 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Amet_1174 50b76d74b2d03c89853991d7020532f9 276 Pfam PF00950 ABC 3 transport family 7 260 6.5E-67 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Amet_2462 bdbb5fe25511d8b3e27f896b60da49fa 138 Pfam PF03652 Holliday junction resolvase 3 135 5.3E-45 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Amet_2462 bdbb5fe25511d8b3e27f896b60da49fa 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 137 26.647 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Amet_2462 bdbb5fe25511d8b3e27f896b60da49fa 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 134 1.6E-46 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Amet_2462 bdbb5fe25511d8b3e27f896b60da49fa 138 SUPERFAMILY SSF53098 1 136 1.03E-44 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2462 bdbb5fe25511d8b3e27f896b60da49fa 138 Gene3D G3DSA:3.30.420.140 1 138 2.9E-48 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Amet_2462 bdbb5fe25511d8b3e27f896b60da49fa 138 SMART SM00732 2 102 1.1E-37 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Amet_3055 c4ba6d772380632d6a6e20a0f7ec93e5 324 Pfam PF03418 Germination protease 254 322 7.5E-18 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Amet_3055 c4ba6d772380632d6a6e20a0f7ec93e5 324 Pfam PF03418 Germination protease 10 253 1.8E-93 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Amet_3055 c4ba6d772380632d6a6e20a0f7ec93e5 324 TIGRFAM TIGR01441 GPR: GPR endopeptidase 3 250 2.4E-100 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Amet_3055 c4ba6d772380632d6a6e20a0f7ec93e5 324 Gene3D G3DSA:3.40.50.1450 1 324 2.1E-127 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily Amet_3055 c4ba6d772380632d6a6e20a0f7ec93e5 324 Hamap MF_00626 Germination protease [gpr]. 1 324 159.853 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Amet_3055 c4ba6d772380632d6a6e20a0f7ec93e5 324 SUPERFAMILY SSF53163 1 324 3.01E-116 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily Amet_3055 c4ba6d772380632d6a6e20a0f7ec93e5 324 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 2 306 6.0E-150 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Amet_3055 c4ba6d772380632d6a6e20a0f7ec93e5 324 PIRSF PIRSF019549 1 324 7.6E-130 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Amet_4476 7d859660cbfc1aedd6e4c12dc409a071 96 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4476 7d859660cbfc1aedd6e4c12dc409a071 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 23.04 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Amet_4476 7d859660cbfc1aedd6e4c12dc409a071 96 Pfam PF00276 Ribosomal protein L23 6 88 2.0E-34 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Amet_4476 7d859660cbfc1aedd6e4c12dc409a071 96 Gene3D G3DSA:3.30.70.330 1 96 3.2E-35 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Amet_4476 7d859660cbfc1aedd6e4c12dc409a071 96 SUPERFAMILY SSF54189 2 94 1.65E-33 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_3142 e55fe23cc7478bc070ba87888244530a 392 PIRSF PIRSF003169 4 392 2.7E-157 T 12-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 Amet_3142 e55fe23cc7478bc070ba87888244530a 392 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 385 3.9E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3142 e55fe23cc7478bc070ba87888244530a 392 SMART SM00387 290 388 5.0E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3142 e55fe23cc7478bc070ba87888244530a 392 SUPERFAMILY SSF55874 255 384 5.89E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3142 e55fe23cc7478bc070ba87888244530a 392 Gene3D G3DSA:3.30.565.10 250 389 6.9E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3142 e55fe23cc7478bc070ba87888244530a 392 Pfam PF05384 Sensor protein DegS 17 175 6.5E-57 T 12-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 Amet_3142 e55fe23cc7478bc070ba87888244530a 392 Pfam PF07730 Histidine kinase 185 251 2.9E-17 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amet_3485 c1536adaba7effb1274990ab71bf4daa 449 SMART SM00729 177 380 3.1E-28 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_3485 c1536adaba7effb1274990ab71bf4daa 449 SUPERFAMILY SSF102114 166 386 3.79E-33 T 12-10-2018 Amet_3485 c1536adaba7effb1274990ab71bf4daa 449 Gene3D G3DSA:3.80.30.20 175 391 1.2E-16 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_3485 c1536adaba7effb1274990ab71bf4daa 449 Pfam PF02310 B12 binding domain 21 118 2.9E-15 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_3485 c1536adaba7effb1274990ab71bf4daa 449 SUPERFAMILY SSF52242 58 127 1.02E-6 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_3485 c1536adaba7effb1274990ab71bf4daa 449 Pfam PF04055 Radical SAM superfamily 183 340 3.8E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3309 1de9b583e020ec28d6077ec93c11e3c5 220 Gene3D G3DSA:3.40.50.720 1 140 1.4E-32 T 12-10-2018 Amet_3309 1de9b583e020ec28d6077ec93c11e3c5 220 SUPERFAMILY SSF51735 7 131 2.03E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3309 1de9b583e020ec28d6077ec93c11e3c5 220 SUPERFAMILY SSF116726 134 219 1.15E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_3309 1de9b583e020ec28d6077ec93c11e3c5 220 Gene3D G3DSA:3.30.70.1450 141 218 3.1E-18 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_3309 1de9b583e020ec28d6077ec93c11e3c5 220 Pfam PF02254 TrkA-N domain 8 123 1.0E-23 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Amet_3309 1de9b583e020ec28d6077ec93c11e3c5 220 Pfam PF02080 TrkA-C domain 153 220 9.2E-7 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Amet_3294 dee6328bb572d4eae5dd704de89a6083 287 SUPERFAMILY SSF161098 6 279 4.97E-43 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3294 dee6328bb572d4eae5dd704de89a6083 287 Gene3D G3DSA:1.10.3720.10 8 281 1.2E-47 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3294 dee6328bb572d4eae5dd704de89a6083 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 282 3.3E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1861 567a5067fb53d1d92fd3907fe6c6b860 240 SMART SM00849 25 213 8.9E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_1861 567a5067fb53d1d92fd3907fe6c6b860 240 SUPERFAMILY SSF56281 22 225 5.9E-33 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_1861 567a5067fb53d1d92fd3907fe6c6b860 240 Gene3D G3DSA:3.60.15.10 7 100 5.0E-14 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_1861 567a5067fb53d1d92fd3907fe6c6b860 240 Pfam PF00753 Metallo-beta-lactamase superfamily 25 151 7.0E-16 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_1861 567a5067fb53d1d92fd3907fe6c6b860 240 Gene3D G3DSA:3.60.15.10 108 235 4.9E-12 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_1008 18cd89c68367d22f60152699137dfae4 66 Gene3D G3DSA:1.10.1660.10 9 60 1.7E-8 T 12-10-2018 Amet_1008 18cd89c68367d22f60152699137dfae4 66 Pfam PF12728 Helix-turn-helix domain 12 61 4.9E-19 T 12-10-2018 Amet_1008 18cd89c68367d22f60152699137dfae4 66 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 12 59 1.7E-17 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Amet_1008 18cd89c68367d22f60152699137dfae4 66 SUPERFAMILY SSF46955 11 60 4.58E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 249 537 3.5E-125 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 291 310 5.1E-31 T 12-10-2018 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 462 477 5.1E-31 T 12-10-2018 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 498 510 5.1E-31 T 12-10-2018 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 445 460 5.1E-31 T 12-10-2018 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 SUPERFAMILY SSF51621 250 547 3.66E-112 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 PIRSF PIRSF000732 1 571 8.5E-235 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 Gene3D G3DSA:3.20.20.60 232 570 4.3E-130 T 12-10-2018 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 3 563 5.1E-233 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 Gene3D G3DSA:1.10.274.10 21 144 9.2E-82 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 Pfam PF00391 PEP-utilising enzyme, mobile domain 151 223 1.2E-23 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 SUPERFAMILY SSF47831 22 141 2.35E-36 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 Pfam PF05524 PEP-utilising enzyme, N-terminal 3 124 3.4E-34 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 SUPERFAMILY SSF52009 123 244 2.62E-36 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Amet_1259 85ba5701a34c9a11317f2c6edeeafc8d 571 Gene3D G3DSA:3.50.30.10 4 231 9.2E-82 T 12-10-2018 Amet_4103 d89d2b5fbbd3883d269c60a2a3389402 399 Gene3D G3DSA:3.40.50.11420 177 285 1.5E-45 T 12-10-2018 Amet_4103 d89d2b5fbbd3883d269c60a2a3389402 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 159 2.4E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_4103 d89d2b5fbbd3883d269c60a2a3389402 399 Gene3D G3DSA:3.40.50.300 2 176 5.4E-42 T 12-10-2018 Amet_4103 d89d2b5fbbd3883d269c60a2a3389402 399 SMART SM00173 7 170 0.0097 T 12-10-2018 Amet_4103 d89d2b5fbbd3883d269c60a2a3389402 399 SUPERFAMILY SSF52540 10 172 5.72E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4103 d89d2b5fbbd3883d269c60a2a3389402 399 Gene3D G3DSA:3.40.50.11410 286 394 1.5E-42 T 12-10-2018 Amet_4103 d89d2b5fbbd3883d269c60a2a3389402 399 Pfam PF01926 50S ribosome-binding GTPase 11 126 9.5E-22 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_4103 d89d2b5fbbd3883d269c60a2a3389402 399 TIGRFAM TIGR03918 GTP_HydF: [FeFe] hydrogenase H-cluster maturation GTPase HydF 3 391 1.2E-179 T 12-10-2018 IPR023873 [FeFe]-hydrogenase H-cluster maturation GTPase HydF Amet_2358 aeb3d9f66015ab0154c87b20e4a30748 419 SUPERFAMILY SSF55681 4 317 6.89E-98 T 12-10-2018 Amet_2358 aeb3d9f66015ab0154c87b20e4a30748 419 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 407 7.4E-157 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Amet_2358 aeb3d9f66015ab0154c87b20e4a30748 419 Gene3D G3DSA:3.40.50.800 323 416 4.0E-25 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Amet_2358 aeb3d9f66015ab0154c87b20e4a30748 419 Pfam PF03129 Anticodon binding domain 330 417 2.3E-14 T 12-10-2018 IPR004154 Anticodon-binding Amet_2358 aeb3d9f66015ab0154c87b20e4a30748 419 Pfam PF13393 Histidyl-tRNA synthetase 8 309 7.3E-48 T 12-10-2018 Amet_2358 aeb3d9f66015ab0154c87b20e4a30748 419 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 417 34.48 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Amet_2358 aeb3d9f66015ab0154c87b20e4a30748 419 SUPERFAMILY SSF52954 326 419 5.29E-24 T 12-10-2018 Amet_2358 aeb3d9f66015ab0154c87b20e4a30748 419 PIRSF PIRSF001549 1 419 2.1E-125 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Amet_2358 aeb3d9f66015ab0154c87b20e4a30748 419 Gene3D G3DSA:3.30.930.10 2 322 7.3E-118 T 12-10-2018 Amet_4577 ee6037e75d1a1692a5b53342d3ecc185 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 46 6.0E-6 T 12-10-2018 Amet_4577 ee6037e75d1a1692a5b53342d3ecc185 92 Pfam PF00936 BMC domain 5 80 1.7E-29 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_4577 ee6037e75d1a1692a5b53342d3ecc185 92 SMART SM00877 4 80 2.5E-37 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_4577 ee6037e75d1a1692a5b53342d3ecc185 92 SUPERFAMILY SSF143414 4 89 4.71E-32 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_4577 ee6037e75d1a1692a5b53342d3ecc185 92 Gene3D G3DSA:3.30.70.1710 1 92 9.4E-42 T 12-10-2018 Amet_0788 4cb6e75f2d518a8212e2d53baf86e0ac 177 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 117 172 7.5E-31 T 12-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Amet_0788 4cb6e75f2d518a8212e2d53baf86e0ac 177 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.7E-28 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Amet_0788 4cb6e75f2d518a8212e2d53baf86e0ac 177 SUPERFAMILY SSF69754 2 99 5.49E-32 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like Amet_0788 4cb6e75f2d518a8212e2d53baf86e0ac 177 Gene3D G3DSA:3.30.505.50 130 176 3.7E-27 T 12-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Amet_0788 4cb6e75f2d518a8212e2d53baf86e0ac 177 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 8.9E-28 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Amet_0788 4cb6e75f2d518a8212e2d53baf86e0ac 177 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 176 24.249 T 12-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid Amet_0788 4cb6e75f2d518a8212e2d53baf86e0ac 177 Gene3D G3DSA:3.30.160.100 1 96 7.0E-33 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like Amet_0164 562bec80232f8d576e9e5758850875db 486 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 206 6.4E-27 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amet_0164 562bec80232f8d576e9e5758850875db 486 SUPERFAMILY SSF101386 231 333 1.14E-24 T 12-10-2018 Amet_0164 562bec80232f8d576e9e5758850875db 486 Gene3D G3DSA:3.40.1010.10 1 118 2.2E-16 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amet_0164 562bec80232f8d576e9e5758850875db 486 Gene3D G3DSA:1.10.287.1080 359 486 3.0E-43 T 12-10-2018 Amet_0164 562bec80232f8d576e9e5758850875db 486 PIRSF PIRSF002845 1 486 6.7E-198 T 12-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted Amet_0164 562bec80232f8d576e9e5758850875db 486 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 395 452 4.9E-6 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Amet_0164 562bec80232f8d576e9e5758850875db 486 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 255 328 1.5E-27 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Amet_0164 562bec80232f8d576e9e5758850875db 486 SUPERFAMILY SSF53790 2 257 1.57E-34 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amet_0164 562bec80232f8d576e9e5758850875db 486 TIGRFAM TIGR00444 mazG: MazG family protein 239 483 8.5E-95 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Amet_0164 562bec80232f8d576e9e5758850875db 486 SUPERFAMILY SSF101386 363 462 2.62E-23 T 12-10-2018 Amet_0164 562bec80232f8d576e9e5758850875db 486 Gene3D G3DSA:1.10.287.1080 229 353 1.7E-44 T 12-10-2018 Amet_0945 0c10c886e34e7c19517e1c5e477cae30 137 Gene3D G3DSA:1.20.1260.10 1 132 2.2E-44 T 12-10-2018 IPR012347 Ferritin-like Amet_0945 0c10c886e34e7c19517e1c5e477cae30 137 SUPERFAMILY SSF47240 3 129 2.79E-36 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_0945 0c10c886e34e7c19517e1c5e477cae30 137 Pfam PF02915 Rubrerythrin 10 124 4.9E-18 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Amet_0709 c8a57e494c337389c32963524ca62360 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 3.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0709 c8a57e494c337389c32963524ca62360 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 3.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0709 c8a57e494c337389c32963524ca62360 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 3.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0709 c8a57e494c337389c32963524ca62360 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 3.8E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0709 c8a57e494c337389c32963524ca62360 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 464 3.9E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0709 c8a57e494c337389c32963524ca62360 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 306 1.1E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_0709 c8a57e494c337389c32963524ca62360 470 SMART SM00388 241 307 6.4E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_0709 c8a57e494c337389c32963524ca62360 470 Gene3D G3DSA:3.30.565.10 311 467 1.8E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0709 c8a57e494c337389c32963524ca62360 470 Gene3D G3DSA:1.20.1480.50 149 246 1.6E-13 T 12-10-2018 Amet_0709 c8a57e494c337389c32963524ca62360 470 Gene3D G3DSA:1.10.287.130 247 308 1.3E-13 T 12-10-2018 Amet_0709 c8a57e494c337389c32963524ca62360 470 SUPERFAMILY SSF47384 224 307 3.92E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_0709 c8a57e494c337389c32963524ca62360 470 SUPERFAMILY SSF158472 190 237 1.44E-9 T 12-10-2018 Amet_0709 c8a57e494c337389c32963524ca62360 470 Pfam PF00672 HAMP domain 190 236 1.8E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0709 c8a57e494c337389c32963524ca62360 470 SMART SM00387 350 465 4.7E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0709 c8a57e494c337389c32963524ca62360 470 SMART SM00304 188 240 5.7E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0709 c8a57e494c337389c32963524ca62360 470 SUPERFAMILY SSF55874 298 463 1.19E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4790 4d9915bcf7462f361230f034cd3d040f 304 Gene3D G3DSA:3.10.310.10 129 292 2.9E-92 T 12-10-2018 Amet_4790 4d9915bcf7462f361230f034cd3d040f 304 PIRSF PIRSF016184 1 303 2.6E-81 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amet_4790 4d9915bcf7462f361230f034cd3d040f 304 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 302 1.4E-68 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amet_4790 4d9915bcf7462f361230f034cd3d040f 304 SUPERFAMILY SSF54506 1 301 2.09E-71 T 12-10-2018 Amet_4790 4d9915bcf7462f361230f034cd3d040f 304 Pfam PF02567 Phenazine biosynthesis-like protein 9 299 3.2E-69 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Amet_4790 4d9915bcf7462f361230f034cd3d040f 304 Gene3D G3DSA:3.10.310.10 6 294 2.9E-92 T 12-10-2018 Amet_0871 02a11990e33b6017822c86582a96798a 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 360 1.3E-64 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_0871 02a11990e33b6017822c86582a96798a 368 Pfam PF03845 Spore germination protein 10 326 1.0E-60 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_0871 02a11990e33b6017822c86582a96798a 368 Gene3D G3DSA:1.20.1740.10 6 367 3.0E-6 T 12-10-2018 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 Gene3D G3DSA:1.10.1050.10 6 197 2.2E-64 T 12-10-2018 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 ProSitePatterns PS00632 Ribosomal protein S4 signature. 86 110 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 Gene3D G3DSA:3.10.290.10 87 182 2.2E-64 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 5 87 2.2E-21 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 Pfam PF01479 S4 domain 89 135 6.8E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 197 30.629 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 SUPERFAMILY SSF55174 2 197 3.27E-56 T 12-10-2018 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 SMART SM01390 3 87 2.1E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 SMART SM00363 88 149 1.0E-17 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_1707 e0daeb6116f58a42aa5deee6c0f3b83d 198 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 197 2.4E-65 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 155 258 1.2E-44 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 4 264 1.1E-127 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 Gene3D G3DSA:3.40.50.2300 2 140 1.5E-34 T 12-10-2018 Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 SUPERFAMILY SSF46894 147 262 1.79E-47 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 PIRSF PIRSF002937 1 265 1.3E-132 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 Gene3D G3DSA:1.10.10.10 146 264 8.6E-52 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 SUPERFAMILY SSF52172 3 143 1.71E-36 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 Pfam PF00072 Response regulator receiver domain 7 120 2.6E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 SMART SM00448 5 120 7.2E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2513 43fb81c3600dcd200465afeb6359faa0 265 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 155 263 8.0E-59 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 Amet_3138 29f95632bf65811c454b4706ead9132e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3138 29f95632bf65811c454b4706ead9132e 300 SUPERFAMILY SSF53850 90 298 2.9E-38 T 12-10-2018 Amet_3138 29f95632bf65811c454b4706ead9132e 300 Gene3D G3DSA:3.40.190.290 91 299 1.1E-38 T 12-10-2018 Amet_3138 29f95632bf65811c454b4706ead9132e 300 Gene3D G3DSA:1.10.10.10 1 86 6.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3138 29f95632bf65811c454b4706ead9132e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3138 29f95632bf65811c454b4706ead9132e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3138 29f95632bf65811c454b4706ead9132e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3138 29f95632bf65811c454b4706ead9132e 300 SUPERFAMILY SSF46785 1 86 6.78E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3138 29f95632bf65811c454b4706ead9132e 300 Pfam PF03466 LysR substrate binding domain 90 285 3.6E-39 T 12-10-2018 IPR005119 LysR, substrate-binding Amet_2952 5cd4c4aaa9aadc56bd7bdb184b46cd5f 433 Gene3D G3DSA:3.40.50.300 1 211 9.1E-77 T 12-10-2018 Amet_2952 5cd4c4aaa9aadc56bd7bdb184b46cd5f 433 Gene3D G3DSA:3.40.50.300 214 387 1.7E-48 T 12-10-2018 Amet_2952 5cd4c4aaa9aadc56bd7bdb184b46cd5f 433 SUPERFAMILY SSF52540 75 359 1.61E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2952 5cd4c4aaa9aadc56bd7bdb184b46cd5f 433 SMART SM00490 259 340 5.6E-31 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_2952 5cd4c4aaa9aadc56bd7bdb184b46cd5f 433 SMART SM00487 20 220 9.4E-61 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_2952 5cd4c4aaa9aadc56bd7bdb184b46cd5f 433 Pfam PF00270 DEAD/DEAH box helicase 25 197 8.3E-53 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amet_2952 5cd4c4aaa9aadc56bd7bdb184b46cd5f 433 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.1E-28 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_4658 3d432902f7cb0181a2810a3fd1191a25 577 SMART SM00382 358 544 2.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4658 3d432902f7cb0181a2810a3fd1191a25 577 SUPERFAMILY SSF90123 3 316 2.62E-83 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_4658 3d432902f7cb0181a2810a3fd1191a25 577 SUPERFAMILY SSF52540 324 569 1.7E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4658 3d432902f7cb0181a2810a3fd1191a25 577 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4658 3d432902f7cb0181a2810a3fd1191a25 577 Gene3D G3DSA:3.40.50.300 329 572 2.4E-94 T 12-10-2018 Amet_4658 3d432902f7cb0181a2810a3fd1191a25 577 Pfam PF00005 ABC transporter 349 498 4.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4658 3d432902f7cb0181a2810a3fd1191a25 577 Gene3D G3DSA:1.20.1560.10 1 315 3.3E-87 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_4658 3d432902f7cb0181a2810a3fd1191a25 577 Pfam PF00664 ABC transporter transmembrane region 20 286 7.2E-58 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amet_1469 e3848bf1e7ac4ff6bea87a5405ae1283 249 Pfam PF02146 Sir2 family 32 202 1.9E-45 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 Amet_1469 e3848bf1e7ac4ff6bea87a5405ae1283 249 SUPERFAMILY SSF52467 10 247 8.47E-74 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amet_1469 e3848bf1e7ac4ff6bea87a5405ae1283 249 Gene3D G3DSA:3.40.50.1220 23 242 1.7E-69 T 12-10-2018 Amet_1469 e3848bf1e7ac4ff6bea87a5405ae1283 249 Gene3D G3DSA:3.30.1600.10 41 172 1.7E-69 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 SUPERFAMILY SSF52374 2 310 2.12E-101 T 12-10-2018 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 Pfam PF09190 DALR domain 354 414 1.5E-16 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 SMART SM00840 353 415 1.6E-19 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 Gene3D G3DSA:1.20.120.640 304 464 3.5E-37 T 12-10-2018 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 464 39.304 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 1.8E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 220 241 1.8E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 189 207 1.8E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 1.8E-30 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 SUPERFAMILY SSF47323 314 463 2.55E-34 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 311 5.7E-134 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 Gene3D G3DSA:3.40.50.620 1 303 1.6E-137 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_4501 4ef1c8817c8efe3d32fabf9933219b06 464 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 463 1.4E-181 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Amet_2819 bcbda864480894923e58f5334182e54b 300 Pfam PF13181 Tetratricopeptide repeat 39 70 0.014 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 Pfam PF13181 Tetratricopeptide repeat 175 206 8.8E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 Pfam PF13181 Tetratricopeptide repeat 142 173 2.9E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SUPERFAMILY SSF48452 141 281 9.29E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 Gene3D G3DSA:1.25.40.10 2 107 2.4E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SUPERFAMILY SSF48452 36 190 1.23E-36 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 Pfam PF00515 Tetratricopeptide repeat 72 104 3.5E-9 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 Pfam PF00515 Tetratricopeptide repeat 107 136 7.3E-7 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SMART SM00028 72 105 5.8E-7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SMART SM00028 208 241 1.4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SMART SM00028 174 207 8.2E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SMART SM00028 140 173 8.2E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SMART SM00028 242 275 0.38 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SMART SM00028 106 139 7.8E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SMART SM00028 38 71 0.0023 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 SMART SM00671 72 103 0.0074 T 12-10-2018 IPR006597 Sel1-like repeat Amet_2819 bcbda864480894923e58f5334182e54b 300 SMART SM00671 106 137 29.0 T 12-10-2018 IPR006597 Sel1-like repeat Amet_2819 bcbda864480894923e58f5334182e54b 300 Gene3D G3DSA:1.25.40.10 213 285 2.2E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_2819 bcbda864480894923e58f5334182e54b 300 Gene3D G3DSA:1.25.40.10 108 212 3.4E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3085 1b606da513981be09deb13bad7e9cc25 328 Gene3D G3DSA:3.40.190.150 38 319 1.3E-78 T 12-10-2018 Amet_3085 1b606da513981be09deb13bad7e9cc25 328 PIRSF PIRSF017082 4 328 1.2E-89 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_3085 1b606da513981be09deb13bad7e9cc25 328 Gene3D G3DSA:3.40.190.10 134 256 1.3E-78 T 12-10-2018 Amet_3085 1b606da513981be09deb13bad7e9cc25 328 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 328 9.1E-52 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_3085 1b606da513981be09deb13bad7e9cc25 328 SUPERFAMILY SSF53850 122 289 1.78E-12 T 12-10-2018 Amet_0457 a3f3b4e8f8b917901667379d8ca033c9 503 SUPERFAMILY SSF52540 2 227 6.77E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0457 a3f3b4e8f8b917901667379d8ca033c9 503 Pfam PF00005 ABC transporter 268 422 5.1E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0457 a3f3b4e8f8b917901667379d8ca033c9 503 SUPERFAMILY SSF52540 265 481 8.65E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0457 a3f3b4e8f8b917901667379d8ca033c9 503 Gene3D G3DSA:3.40.50.300 253 495 4.6E-40 T 12-10-2018 Amet_0457 a3f3b4e8f8b917901667379d8ca033c9 503 SMART SM00382 276 472 0.57 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0457 a3f3b4e8f8b917901667379d8ca033c9 503 SMART SM00382 27 217 3.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0457 a3f3b4e8f8b917901667379d8ca033c9 503 Pfam PF00005 ABC transporter 18 167 2.3E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0457 a3f3b4e8f8b917901667379d8ca033c9 503 Gene3D G3DSA:3.40.50.300 1 244 5.6E-54 T 12-10-2018 Amet_0457 a3f3b4e8f8b917901667379d8ca033c9 503 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2744 15984571fdaa687769cc2aba868f7a56 168 Gene3D G3DSA:2.30.30.240 91 168 1.6E-16 T 12-10-2018 Amet_2744 15984571fdaa687769cc2aba868f7a56 168 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 166 23.663 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Amet_2744 15984571fdaa687769cc2aba868f7a56 168 SUPERFAMILY SSF50447 4 86 4.94E-18 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_2744 15984571fdaa687769cc2aba868f7a56 168 Pfam PF01782 RimM N-terminal domain 7 86 8.0E-19 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 Amet_2744 15984571fdaa687769cc2aba868f7a56 168 SUPERFAMILY SSF50346 95 166 1.88E-15 T 12-10-2018 IPR011033 PRC-barrel-like superfamily Amet_2744 15984571fdaa687769cc2aba868f7a56 168 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 165 3.6E-43 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Amet_2744 15984571fdaa687769cc2aba868f7a56 168 Gene3D G3DSA:2.40.30.60 4 90 4.1E-17 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Amet_2744 15984571fdaa687769cc2aba868f7a56 168 Pfam PF05239 PRC-barrel domain 92 166 1.0E-7 T 12-10-2018 IPR027275 PRC-barrel domain Amet_1498 93eae1d6473bf9930f416199144b1489 535 Gene3D G3DSA:3.30.457.10 189 274 7.5E-16 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_1498 93eae1d6473bf9930f416199144b1489 535 Pfam PF14343 PrcB C-terminal 338 394 1.4E-17 T 12-10-2018 IPR025748 PrcB C-terminal domain Amet_1498 93eae1d6473bf9930f416199144b1489 535 SUPERFAMILY SSF55383 187 278 1.96E-19 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_1498 93eae1d6473bf9930f416199144b1489 535 Pfam PF07833 Copper amine oxidase N-terminal domain 184 282 1.2E-24 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_4104 e9bce5a483b9f622807da9771bf8d26f 436 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 326 415 2.3E-6 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_4104 e9bce5a483b9f622807da9771bf8d26f 436 PIRSF PIRSF004762 81 436 1.6E-148 T 12-10-2018 Amet_4104 e9bce5a483b9f622807da9771bf8d26f 436 SMART SM00876 322 415 1.2E-7 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_4104 e9bce5a483b9f622807da9771bf8d26f 436 Pfam PF11823 Protein of unknown function (DUF3343) 8 74 3.8E-14 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 Amet_4104 e9bce5a483b9f622807da9771bf8d26f 436 Gene3D G3DSA:3.20.20.70 89 431 3.6E-114 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_4104 e9bce5a483b9f622807da9771bf8d26f 436 Pfam PF04055 Radical SAM superfamily 152 310 1.5E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_4104 e9bce5a483b9f622807da9771bf8d26f 436 SUPERFAMILY SSF102114 108 387 2.62E-54 T 12-10-2018 Amet_4104 e9bce5a483b9f622807da9771bf8d26f 436 TIGRFAM TIGR03956 rSAM_HydE: [FeFe] hydrogenase H-cluster radical SAM maturase HydE 102 412 7.1E-97 T 12-10-2018 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM Amet_4104 e9bce5a483b9f622807da9771bf8d26f 436 SMART SM00729 148 357 3.6E-22 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_1266 7f498e023e57edb6ce0742250b40d4d5 335 Gene3D G3DSA:3.40.190.150 45 322 1.0E-69 T 12-10-2018 Amet_1266 7f498e023e57edb6ce0742250b40d4d5 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 64 329 1.4E-39 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_1266 7f498e023e57edb6ce0742250b40d4d5 335 PIRSF PIRSF017082 9 332 8.0E-71 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_1266 7f498e023e57edb6ce0742250b40d4d5 335 Gene3D G3DSA:3.40.190.10 141 260 1.0E-69 T 12-10-2018 Amet_4053 831356e2e7e10e7205546bfe00a27e53 175 SUPERFAMILY SSF88659 128 170 3.92E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_3024 c31e8ec79b0503153e3a3f41adce8eee 246 Pfam PF02565 Recombination protein O C terminal 82 240 3.5E-34 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Amet_3024 c31e8ec79b0503153e3a3f41adce8eee 246 Gene3D G3DSA:2.40.50.140 2 82 1.6E-16 T 12-10-2018 Amet_3024 c31e8ec79b0503153e3a3f41adce8eee 246 Gene3D G3DSA:3.30.60.100 147 183 5.2E-21 T 12-10-2018 Amet_3024 c31e8ec79b0503153e3a3f41adce8eee 246 Hamap MF_00201 DNA repair protein RecO [recO]. 1 246 30.405 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Amet_3024 c31e8ec79b0503153e3a3f41adce8eee 246 Pfam PF11967 Recombination protein O N terminal 1 77 4.3E-24 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Amet_3024 c31e8ec79b0503153e3a3f41adce8eee 246 SUPERFAMILY SSF50249 1 78 9.25E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_3024 c31e8ec79b0503153e3a3f41adce8eee 246 Gene3D G3DSA:1.20.1440.120 87 235 5.2E-21 T 12-10-2018 Amet_3024 c31e8ec79b0503153e3a3f41adce8eee 246 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 244 3.2E-59 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Amet_3024 c31e8ec79b0503153e3a3f41adce8eee 246 SUPERFAMILY SSF57863 80 234 4.45E-38 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 SUPERFAMILY SSF46689 529 572 4.18E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 Gene3D G3DSA:3.40.50.300 262 443 8.8E-39 T 12-10-2018 Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 Pfam PF00158 Sigma-54 interaction domain 276 436 3.5E-34 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 SMART SM00382 296 460 0.0079 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 Gene3D G3DSA:1.10.8.60 444 511 3.2E-10 T 12-10-2018 Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 Pfam PF02954 Bacterial regulatory protein, Fis family 529 569 3.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 Gene3D G3DSA:3.30.450.40 3 161 4.9E-8 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 Pfam PF01590 GAF domain 6 108 1.8E-5 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 Gene3D G3DSA:1.10.10.60 529 571 4.1E-12 T 12-10-2018 Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 SUPERFAMILY SSF52540 275 514 2.55E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4111 ea7cc3f8838a1113d1fb7a113be33faa 573 SUPERFAMILY SSF55781 7 147 4.71E-8 T 12-10-2018 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 Gene3D G3DSA:3.20.20.70 2 52 3.5E-18 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 Gene3D G3DSA:3.30.70.20 53 97 5.7E-10 T 12-10-2018 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 6 285 1.1E-110 T 12-10-2018 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 Pfam PF13353 4Fe-4S single cluster domain 16 174 2.7E-11 T 12-10-2018 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 Gene3D G3DSA:3.80.30.10 119 296 5.2E-60 T 12-10-2018 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 SUPERFAMILY SSF102114 83 268 1.08E-17 T 12-10-2018 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 SUPERFAMILY SSF54862 6 132 3.45E-20 T 12-10-2018 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 80 91 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 PIRSF PIRSF000371 1 296 8.4E-107 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Amet_0583 dfab898b69328aef926e50f289cd8e5c 297 Pfam PF04055 Radical SAM superfamily 24 231 9.5E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_4073 a17485599d4109c717a13cbbc0749457 298 SMART SM01222 3 180 8.3E-114 T 12-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_4073 a17485599d4109c717a13cbbc0749457 298 Gene3D G3DSA:3.30.70.670 182 298 5.4E-38 T 12-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4073 a17485599d4109c717a13cbbc0749457 298 SMART SM01221 181 295 2.8E-77 T 12-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4073 a17485599d4109c717a13cbbc0749457 298 SUPERFAMILY SSF55116 181 297 1.67E-47 T 12-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_4073 a17485599d4109c717a13cbbc0749457 298 Gene3D G3DSA:3.30.990.10 1 180 3.9E-67 T 12-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_4073 a17485599d4109c717a13cbbc0749457 298 Pfam PF02971 Formiminotransferase domain 182 285 3.4E-26 T 12-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4073 a17485599d4109c717a13cbbc0749457 298 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 4 179 1.2E-71 T 12-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_4073 a17485599d4109c717a13cbbc0749457 298 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 1 297 1.5E-129 T 12-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4073 a17485599d4109c717a13cbbc0749457 298 SUPERFAMILY SSF55116 3 180 1.41E-70 T 12-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Amet_2300 68e99ee17dfa9ffcdb848ea5f76032cd 613 SUPERFAMILY SSF102114 226 609 3.43E-50 T 12-10-2018 Amet_2300 68e99ee17dfa9ffcdb848ea5f76032cd 613 SMART SM00729 258 484 2.6E-28 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_2300 68e99ee17dfa9ffcdb848ea5f76032cd 613 Gene3D G3DSA:3.80.30.20 257 442 1.7E-18 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_2300 68e99ee17dfa9ffcdb848ea5f76032cd 613 Pfam PF04055 Radical SAM superfamily 263 423 8.8E-15 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_2300 68e99ee17dfa9ffcdb848ea5f76032cd 613 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 7 612 6.8E-294 T 12-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM Amet_4582 2224eff869af900be671c0aca50857c4 185 SUPERFAMILY SSF52507 2 184 4.58E-66 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amet_4582 2224eff869af900be671c0aca50857c4 185 Pfam PF02441 Flavoprotein 2 163 3.5E-29 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Amet_4582 2224eff869af900be671c0aca50857c4 185 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 184 37.261 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Amet_4582 2224eff869af900be671c0aca50857c4 185 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 182 6.3E-76 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Amet_4582 2224eff869af900be671c0aca50857c4 185 Gene3D G3DSA:3.40.50.1950 1 185 6.6E-84 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amet_1644 f5f4df1a46b28413faab87ca597c94fe 253 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1644 f5f4df1a46b28413faab87ca597c94fe 253 SUPERFAMILY SSF52540 5 225 3.84E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1644 f5f4df1a46b28413faab87ca597c94fe 253 Pfam PF00005 ABC transporter 22 167 4.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1644 f5f4df1a46b28413faab87ca597c94fe 253 Gene3D G3DSA:3.40.50.300 1 252 2.7E-65 T 12-10-2018 Amet_1644 f5f4df1a46b28413faab87ca597c94fe 253 SMART SM00382 31 216 1.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 Gene3D G3DSA:1.10.3930.10 71 154 2.2E-155 T 12-10-2018 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 PIRSF PIRSF006356 1 407 2.8E-155 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 PRINTS PR01466 Bacterial arginine deiminase signature 182 197 6.5E-55 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 6.5E-55 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 PRINTS PR01466 Bacterial arginine deiminase signature 5 25 6.5E-55 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 6.5E-55 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 6.5E-55 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 PRINTS PR01466 Bacterial arginine deiminase signature 154 172 6.5E-55 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 TIGRFAM TIGR01078 arcA: arginine deiminase 7 406 2.9E-155 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 Pfam PF02274 Amidinotransferase 21 404 1.7E-96 T 12-10-2018 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 Hamap MF_00242 Arginine deiminase [arcA]. 4 407 43.619 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 Gene3D G3DSA:3.75.10.10 8 402 2.2E-155 T 12-10-2018 Amet_3161 d1d40db9422aa2bca0dc5d3b28ba005c 407 SUPERFAMILY SSF55909 6 406 2.14E-122 T 12-10-2018 Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 Hamap MF_01396 ATP synthase subunit c [atpH]. 24 92 12.79 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 120 177 5.6E-16 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 Pfam PF00137 ATP synthase subunit C 29 91 2.8E-12 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 Pfam PF00137 ATP synthase subunit C 112 174 5.1E-15 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 Gene3D G3DSA:1.20.120.610 1 181 1.2E-58 T 12-10-2018 Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 SUPERFAMILY SSF81333 22 96 4.32E-14 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 Hamap MF_01396 ATP synthase subunit c [atpH]. 107 175 12.752 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 SUPERFAMILY SSF81333 106 179 2.09E-15 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 PRINTS PR00124 ATP synthase C subunit signature 29 48 1.0E-13 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 PRINTS PR00124 ATP synthase C subunit signature 50 65 1.0E-13 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0347 eeb6d1b8f3274b94a3be2acae2b01788 184 PRINTS PR00124 ATP synthase C subunit signature 67 92 1.0E-13 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0183 d97f17d054f35957a10d31775a9553eb 534 SUPERFAMILY SSF52540 3 272 2.29E-126 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0183 d97f17d054f35957a10d31775a9553eb 534 Pfam PF00117 Glutamine amidotransferase class-I 303 527 2.9E-59 T 12-10-2018 IPR017926 Glutamine amidotransferase Amet_0183 d97f17d054f35957a10d31775a9553eb 534 Gene3D G3DSA:3.40.50.880 287 534 7.9E-106 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0183 d97f17d054f35957a10d31775a9553eb 534 TIGRFAM TIGR00337 PyrG: CTP synthase 2 528 3.0E-259 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Amet_0183 d97f17d054f35957a10d31775a9553eb 534 Pfam PF06418 CTP synthase N-terminus 4 268 1.5E-130 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Amet_0183 d97f17d054f35957a10d31775a9553eb 534 Hamap MF_01227 CTP synthase [pyrG]. 3 533 53.599 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Amet_0183 d97f17d054f35957a10d31775a9553eb 534 Gene3D G3DSA:3.40.50.300 1 286 7.3E-137 T 12-10-2018 Amet_0183 d97f17d054f35957a10d31775a9553eb 534 SUPERFAMILY SSF52317 291 533 5.57E-85 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0244 4c8d3eda0fd108e050752ff576b8fe8b 89 SUPERFAMILY SSF56300 10 82 2.81E-5 T 12-10-2018 Amet_0244 4c8d3eda0fd108e050752ff576b8fe8b 89 Gene3D G3DSA:3.60.21.10 3 84 1.2E-5 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_0244 4c8d3eda0fd108e050752ff576b8fe8b 89 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 48 53 - T 12-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_1574 9dcd89a19c6f043b8861478bf7f7d98d 226 Gene3D G3DSA:1.10.260.40 4 109 1.6E-18 T 12-10-2018 Amet_1574 9dcd89a19c6f043b8861478bf7f7d98d 226 SMART SM00530 7 62 1.1E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1574 9dcd89a19c6f043b8861478bf7f7d98d 226 SUPERFAMILY SSF47413 2 64 5.91E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_1574 9dcd89a19c6f043b8861478bf7f7d98d 226 Pfam PF01381 Helix-turn-helix 8 62 1.6E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1574 9dcd89a19c6f043b8861478bf7f7d98d 226 SUPERFAMILY SSF55785 119 214 4.71E-6 T 12-10-2018 IPR035965 PAS domain superfamily Amet_1574 9dcd89a19c6f043b8861478bf7f7d98d 226 Gene3D G3DSA:3.30.450.20 110 219 2.1E-9 T 12-10-2018 Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 Gene3D G3DSA:3.30.980.40 306 410 3.7E-39 T 12-10-2018 Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 Pfam PF01580 FtsK/SpoIIIE family 552 601 3.1E-15 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 Pfam PF01580 FtsK/SpoIIIE family 414 549 1.5E-48 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 42 182 1.6E-8 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 SMART SM00382 449 622 8.2E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 SUPERFAMILY SSF46785 700 763 4.2E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 SUPERFAMILY SSF52540 387 671 3.58E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 Pfam PF09397 Ftsk gamma domain 701 761 9.8E-30 T 12-10-2018 IPR018541 FtsK gamma domain Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 SMART SM00843 699 764 3.0E-37 T 12-10-2018 IPR018541 FtsK gamma domain Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 Gene3D G3DSA:3.40.50.300 411 688 1.4E-111 T 12-10-2018 Amet_2662 212ccb6e76a8cc12bf253ed3701efa74 776 Gene3D G3DSA:1.10.10.10 697 760 2.1E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3334 56f6d9c8debf3691c6f0d2baa3edff4c 341 PIRSF PIRSF006468 1 341 1.5E-120 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 Amet_3334 56f6d9c8debf3691c6f0d2baa3edff4c 341 Gene3D G3DSA:3.20.10.10 162 341 6.0E-54 T 12-10-2018 Amet_3334 56f6d9c8debf3691c6f0d2baa3edff4c 341 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 32 340 2.2E-141 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 Amet_3334 56f6d9c8debf3691c6f0d2baa3edff4c 341 Gene3D G3DSA:3.30.470.10 1 161 1.2E-61 T 12-10-2018 Amet_3334 56f6d9c8debf3691c6f0d2baa3edff4c 341 Pfam PF01063 Amino-transferase class IV 57 294 1.1E-34 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Amet_3334 56f6d9c8debf3691c6f0d2baa3edff4c 341 SUPERFAMILY SSF56752 4 337 3.27E-104 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Amet_3334 56f6d9c8debf3691c6f0d2baa3edff4c 341 ProSitePatterns PS00770 Aminotransferases class-IV signature. 221 250 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Amet_4332 bb8e6ae5c81ebd8a58c22c017a5f1722 179 Pfam PF07456 Heptaprenyl diphosphate synthase component I 13 158 1.9E-50 T 12-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I Amet_4332 bb8e6ae5c81ebd8a58c22c017a5f1722 179 PIRSF PIRSF027391 1 173 3.3E-50 T 12-10-2018 IPR014535 Predicted heptaprenyl diphosphate synthase, component I Amet_4332 bb8e6ae5c81ebd8a58c22c017a5f1722 179 Gene3D G3DSA:1.10.1760.20 1 164 2.4E-14 T 12-10-2018 Amet_4648 aca63a17634285d8badb9c93507c89c4 660 Gene3D G3DSA:3.40.50.970 2 329 1.1E-125 T 12-10-2018 Amet_4648 aca63a17634285d8badb9c93507c89c4 660 SUPERFAMILY SSF52922 532 659 3.14E-39 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_4648 aca63a17634285d8badb9c93507c89c4 660 TIGRFAM TIGR00232 tktlase_bact: transketolase 7 659 2.3E-283 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Amet_4648 aca63a17634285d8badb9c93507c89c4 660 SUPERFAMILY SSF52518 4 332 6.43E-116 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_4648 aca63a17634285d8badb9c93507c89c4 660 Gene3D G3DSA:3.40.50.920 536 660 3.6E-43 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_4648 aca63a17634285d8badb9c93507c89c4 660 Pfam PF02780 Transketolase, C-terminal domain 544 653 5.9E-10 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Amet_4648 aca63a17634285d8badb9c93507c89c4 660 Pfam PF02779 Transketolase, pyrimidine binding domain 353 524 7.9E-49 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amet_4648 aca63a17634285d8badb9c93507c89c4 660 SUPERFAMILY SSF52518 350 526 2.11E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_4648 aca63a17634285d8badb9c93507c89c4 660 SMART SM00861 354 525 4.5E-70 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amet_4648 aca63a17634285d8badb9c93507c89c4 660 Gene3D G3DSA:3.40.50.970 332 534 8.3E-78 T 12-10-2018 Amet_4648 aca63a17634285d8badb9c93507c89c4 660 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 337 6.8E-153 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amet_4648 aca63a17634285d8badb9c93507c89c4 660 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Amet_3952 d3d2e1b28f2ac0e63f5032939ae45ac3 104 Gene3D G3DSA:2.40.50.480 27 104 1.6E-16 T 12-10-2018 IPR036166 YxeA-like superfamily Amet_3952 d3d2e1b28f2ac0e63f5032939ae45ac3 104 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 104 4.5E-15 T 12-10-2018 IPR006542 Protein of unknown function DUF1093 Amet_3952 d3d2e1b28f2ac0e63f5032939ae45ac3 104 Pfam PF06486 Protein of unknown function (DUF1093) 32 101 3.5E-12 T 12-10-2018 IPR006542 Protein of unknown function DUF1093 Amet_3952 d3d2e1b28f2ac0e63f5032939ae45ac3 104 SUPERFAMILY SSF159121 29 104 8.5E-14 T 12-10-2018 IPR036166 YxeA-like superfamily Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 Pfam PF09106 Elongation factor SelB, winged helix 448 502 8.1E-12 T 12-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 Gene3D G3DSA:3.40.50.300 2 170 1.7E-46 T 12-10-2018 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 Gene3D G3DSA:2.40.30.10 175 295 3.7E-36 T 12-10-2018 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 SUPERFAMILY SSF52540 3 195 4.27E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 Pfam PF09107 Elongation factor SelB, winged helix 584 630 3.7E-21 T 12-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 630 1.0E-113 T 12-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 Gene3D G3DSA:1.10.10.2770 442 571 6.2E-26 T 12-10-2018 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 SUPERFAMILY SSF50465 265 364 2.01E-26 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 SUPERFAMILY SSF46785 438 509 1.39E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 Gene3D G3DSA:1.10.10.10 572 631 1.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 SUPERFAMILY SSF46785 579 630 3.08E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 Pfam PF00009 Elongation factor Tu GTP binding domain 4 167 9.8E-31 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 Pfam PF03144 Elongation factor Tu domain 2 194 260 1.1E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 137 8.0E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 SUPERFAMILY SSF50447 174 265 1.85E-25 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 PRINTS PR00315 GTP-binding elongation factor signature 5 18 6.4E-6 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 PRINTS PR00315 GTP-binding elongation factor signature 57 67 6.4E-6 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_2324 f805e8b45c2f885027ff26aa10059c52 631 PRINTS PR00315 GTP-binding elongation factor signature 73 84 6.4E-6 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 SUPERFAMILY SSF46565 2 62 7.07E-14 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 Pfam PF00226 DnaJ domain 3 59 9.1E-10 T 12-10-2018 IPR001623 DnaJ domain Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 PRINTS PR00625 DnaJ domain signature 5 23 7.9E-5 T 12-10-2018 IPR001623 DnaJ domain Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 PRINTS PR00625 DnaJ domain signature 34 54 7.9E-5 T 12-10-2018 IPR001623 DnaJ domain Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 SUPERFAMILY SSF103642 437 457 9.65E-8 T 12-10-2018 Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 Gene3D G3DSA:1.10.287.110 1 82 4.9E-14 T 12-10-2018 IPR036869 Chaperone J-domain superfamily Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 Gene3D G3DSA:3.10.450.50 388 458 5.3E-11 T 12-10-2018 Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 SMART SM00028 102 135 7.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 SMART SM00028 249 282 320.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 SMART SM00028 136 169 0.12 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 SMART SM00271 2 54 1.2E-7 T 12-10-2018 IPR001623 DnaJ domain Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 ProSitePatterns PS00636 Nt-dnaJ domain signature. 39 58 - T 12-10-2018 IPR018253 DnaJ domain, conserved site Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 SUPERFAMILY SSF48452 70 284 8.86E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 Pfam PF02810 SEC-C motif 440 457 9.3E-11 T 12-10-2018 IPR004027 SEC-C motif Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 Gene3D G3DSA:1.25.40.10 104 306 2.8E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0287 a36165b93c6e84dd3e9b8431a3a48716 458 Pfam PF13181 Tetratricopeptide repeat 141 169 1.7E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_2967 19e1d81497e9866b70a981474b307095 534 SUPERFAMILY SSF103190 38 169 3.65E-26 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_2967 19e1d81497e9866b70a981474b307095 534 SMART SM00091 217 284 1.2E-8 T 12-10-2018 IPR000014 PAS domain Amet_2967 19e1d81497e9866b70a981474b307095 534 SUPERFAMILY SSF55785 221 308 4.19E-12 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2967 19e1d81497e9866b70a981474b307095 534 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 325 376 1.1E-10 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain Amet_2967 19e1d81497e9866b70a981474b307095 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 2.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2967 19e1d81497e9866b70a981474b307095 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 2.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2967 19e1d81497e9866b70a981474b307095 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 2.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2967 19e1d81497e9866b70a981474b307095 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 2.3E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2967 19e1d81497e9866b70a981474b307095 534 SMART SM00387 422 532 9.3E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2967 19e1d81497e9866b70a981474b307095 534 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 222 294 3.6E-7 T 12-10-2018 IPR000014 PAS domain Amet_2967 19e1d81497e9866b70a981474b307095 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 530 5.3E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2967 19e1d81497e9866b70a981474b307095 534 Gene3D G3DSA:3.30.450.20 32 168 1.6E-31 T 12-10-2018 Amet_2967 19e1d81497e9866b70a981474b307095 534 Pfam PF00989 PAS fold 219 315 1.7E-12 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_2967 19e1d81497e9866b70a981474b307095 534 Gene3D G3DSA:3.30.450.20 204 317 1.1E-24 T 12-10-2018 Amet_2967 19e1d81497e9866b70a981474b307095 534 Gene3D G3DSA:3.30.565.10 393 533 6.6E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2967 19e1d81497e9866b70a981474b307095 534 Pfam PF17203 Single cache domain 3 36 152 1.4E-12 T 12-10-2018 IPR033463 Single cache domain 3 Amet_2967 19e1d81497e9866b70a981474b307095 534 SUPERFAMILY SSF55890 325 394 3.27E-12 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Amet_2967 19e1d81497e9866b70a981474b307095 534 SUPERFAMILY SSF55874 418 529 9.69E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3628 ecec82919616b57ad04cf6355410adaa 216 SUPERFAMILY SSF48150 7 213 7.38E-75 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 7.5E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 SMART SM00478 43 190 1.7E-60 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 173 4.2E-23 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 Gene3D G3DSA:1.10.1670.10 16 208 3.1E-81 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 TIGRFAM TIGR01083 nth: endonuclease III 9 199 1.8E-82 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 PIRSF PIRSF001435 5 216 6.9E-63 T 12-10-2018 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 Hamap MF_00942 Endonuclease III [nth]. 1 214 38.799 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 SMART SM00525 191 211 1.3E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 Gene3D G3DSA:1.10.340.30 26 137 3.1E-81 T 12-10-2018 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 ProSitePatterns PS01155 Endonuclease III family signature. 107 136 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 Pfam PF00633 Helix-hairpin-helix motif 105 132 3.1E-7 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Amet_3628 ecec82919616b57ad04cf6355410adaa 216 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Amet_3803 b76f54ecd24a3531b31468712875b92a 979 Pfam PF07523 Bacterial Ig-like domain (group 3) 468 533 1.2E-7 T 12-10-2018 IPR022038 Bacterial Ig-like domain Amet_3803 b76f54ecd24a3531b31468712875b92a 979 SUPERFAMILY SSF49313 757 834 5.81E-9 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Amet_3803 b76f54ecd24a3531b31468712875b92a 979 Pfam PF03442 Carbohydrate binding domain X2 543 627 2.7E-11 T 12-10-2018 IPR005102 Carbohydrate binding X2 domain Amet_3803 b76f54ecd24a3531b31468712875b92a 979 Gene3D G3DSA:2.60.40.10 746 835 1.2E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_3803 b76f54ecd24a3531b31468712875b92a 979 Gene3D G3DSA:3.30.457.10 888 967 1.7E-19 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_3803 b76f54ecd24a3531b31468712875b92a 979 Pfam PF12733 Cadherin-like beta sandwich domain 649 730 9.9E-16 T 12-10-2018 IPR025883 Cadherin-like beta sandwich domain Amet_3803 b76f54ecd24a3531b31468712875b92a 979 Gene3D G3DSA:2.60.40.10 540 638 1.1E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_3803 b76f54ecd24a3531b31468712875b92a 979 SUPERFAMILY SSF55383 887 970 5.56E-22 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_3803 b76f54ecd24a3531b31468712875b92a 979 Gene3D G3DSA:2.60.40.3630 458 536 3.4E-24 T 12-10-2018 Amet_3803 b76f54ecd24a3531b31468712875b92a 979 Pfam PF07833 Copper amine oxidase N-terminal domain 885 977 3.6E-28 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_3803 b76f54ecd24a3531b31468712875b92a 979 Pfam PF07833 Copper amine oxidase N-terminal domain 853 905 4.1E-7 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_2743 e14738bd8de007c9a2c75eab1a7220d6 247 SUPERFAMILY SSF75217 1 244 7.19E-100 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Amet_2743 e14738bd8de007c9a2c75eab1a7220d6 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 3.9E-67 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amet_2743 e14738bd8de007c9a2c75eab1a7220d6 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 109.226 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amet_2743 e14738bd8de007c9a2c75eab1a7220d6 247 Gene3D G3DSA:3.40.1280.10 1 176 2.3E-73 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amet_2743 e14738bd8de007c9a2c75eab1a7220d6 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 8.8E-98 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amet_2743 e14738bd8de007c9a2c75eab1a7220d6 247 PIRSF PIRSF000386 1 247 2.5E-101 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amet_2743 e14738bd8de007c9a2c75eab1a7220d6 247 Gene3D G3DSA:1.10.1270.20 177 247 1.4E-29 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Amet_1091 cdd68d775594b6a581eff736e725ee7c 398 SUPERFAMILY SSF103473 10 388 5.36E-50 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_1091 cdd68d775594b6a581eff736e725ee7c 398 Gene3D G3DSA:1.20.1250.20 8 386 1.2E-46 T 12-10-2018 Amet_1091 cdd68d775594b6a581eff736e725ee7c 398 Pfam PF07690 Major Facilitator Superfamily 17 232 2.0E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_1378 a0dddc28d3762c34cc58c6475b31839a 256 Gene3D G3DSA:3.40.50.2300 3 134 1.1E-33 T 12-10-2018 Amet_1378 a0dddc28d3762c34cc58c6475b31839a 256 SMART SM00850 155 254 5.3E-30 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_1378 a0dddc28d3762c34cc58c6475b31839a 256 Gene3D G3DSA:2.40.50.1020 137 254 7.7E-12 T 12-10-2018 Amet_1378 a0dddc28d3762c34cc58c6475b31839a 256 SUPERFAMILY SSF52172 4 127 8.82E-31 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1378 a0dddc28d3762c34cc58c6475b31839a 256 SMART SM00448 3 114 3.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1378 a0dddc28d3762c34cc58c6475b31839a 256 Pfam PF00072 Response regulator receiver domain 5 112 1.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1378 a0dddc28d3762c34cc58c6475b31839a 256 Pfam PF04397 LytTr DNA-binding domain 156 252 8.6E-23 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_4795 fa5eb734ca21bf503ac41e2b6e7e2f44 239 Gene3D G3DSA:3.40.50.150 1 239 2.8E-90 T 12-10-2018 Amet_4795 fa5eb734ca21bf503ac41e2b6e7e2f44 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 213 2.1E-60 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Amet_4795 fa5eb734ca21bf503ac41e2b6e7e2f44 239 PIRSF PIRSF003078 1 221 2.8E-60 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Amet_4795 fa5eb734ca21bf503ac41e2b6e7e2f44 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 215 29.045 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Amet_4795 fa5eb734ca21bf503ac41e2b6e7e2f44 239 SUPERFAMILY SSF53335 9 238 1.02E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_4795 fa5eb734ca21bf503ac41e2b6e7e2f44 239 Pfam PF02527 rRNA small subunit methyltransferase G 22 200 3.1E-57 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SMART SM00052 669 916 1.9E-96 T 12-10-2018 IPR001633 EAL domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Gene3D G3DSA:3.30.450.20 133 245 1.7E-15 T 12-10-2018 Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Gene3D G3DSA:3.30.450.20 18 120 5.1E-9 T 12-10-2018 Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Gene3D G3DSA:3.30.450.20 257 371 7.2E-17 T 12-10-2018 Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Gene3D G3DSA:3.30.70.270 492 671 3.1E-47 T 12-10-2018 Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Gene3D G3DSA:3.20.20.450 672 924 1.8E-90 T 12-10-2018 IPR035919 EAL domain superfamily Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 499 651 4.7E-34 T 12-10-2018 IPR000160 GGDEF domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SMART SM00091 252 319 3.9E-4 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SMART SM00091 10 77 130.0 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SMART SM00091 373 439 2.9E-6 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SMART SM00091 136 203 7.0E-5 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Gene3D G3DSA:3.30.450.20 372 489 4.0E-26 T 12-10-2018 Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SUPERFAMILY SSF141868 675 922 6.41E-83 T 12-10-2018 IPR035919 EAL domain superfamily Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SUPERFAMILY SSF55785 28 131 6.28E-7 T 12-10-2018 IPR035965 PAS domain superfamily Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SMART SM00267 487 659 5.2E-34 T 12-10-2018 IPR000160 GGDEF domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Pfam PF00563 EAL domain 675 911 2.2E-67 T 12-10-2018 IPR001633 EAL domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Pfam PF00989 PAS fold 258 361 8.5E-9 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Pfam PF00990 Diguanylate cyclase, GGDEF domain 501 651 6.6E-38 T 12-10-2018 IPR000160 GGDEF domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SUPERFAMILY SSF55785 139 243 1.95E-12 T 12-10-2018 IPR035965 PAS domain superfamily Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SUPERFAMILY SSF55785 382 483 5.93E-22 T 12-10-2018 IPR035965 PAS domain superfamily Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 240 1.3E-10 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 253 372 1.5E-13 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 371 492 3.8E-16 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Pfam PF13426 PAS domain 24 123 3.2E-6 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Pfam PF13426 PAS domain 151 242 4.9E-6 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 Pfam PF13426 PAS domain 384 486 4.1E-12 T 12-10-2018 IPR000014 PAS domain Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SUPERFAMILY SSF55073 503 651 2.35E-39 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_1448 453a6ad6c4aec7081c2f9c64ee154713 925 SUPERFAMILY SSF55785 264 373 1.2E-15 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 553 573 2.3E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 536 553 2.3E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 SUPERFAMILY SSF55785 2 99 1.38E-14 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 SMART SM00382 273 417 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 277 290 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 Pfam PF02954 Bacterial regulatory protein, Fis family 530 570 2.2E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 109 7.5E-12 T 12-10-2018 IPR000014 PAS domain Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 118 234 5.9E-13 T 12-10-2018 IPR000014 PAS domain Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 Gene3D G3DSA:1.10.8.60 425 490 6.2E-21 T 12-10-2018 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 340 355 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 Gene3D G3DSA:1.10.10.60 494 574 3.5E-17 T 12-10-2018 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 Gene3D G3DSA:3.40.50.300 239 424 3.7E-66 T 12-10-2018 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 SUPERFAMILY SSF46689 506 573 2.11E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 SUPERFAMILY SSF55785 106 225 6.28E-12 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 Pfam PF00989 PAS fold 123 182 1.0E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 Pfam PF00989 PAS fold 4 103 3.5E-12 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 SUPERFAMILY SSF52540 252 498 1.36E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 Pfam PF00158 Sigma-54 interaction domain 253 420 1.9E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 SMART SM00091 121 188 0.017 T 12-10-2018 IPR000014 PAS domain Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 SMART SM00091 3 69 1.4E-7 T 12-10-2018 IPR000014 PAS domain Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 467 476 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 Gene3D G3DSA:3.30.450.20 108 225 2.7E-17 T 12-10-2018 Amet_4311 c1e3d71dc4c67820b1cb1cd2f5337efc 575 Gene3D G3DSA:3.30.450.20 1 103 7.1E-23 T 12-10-2018 Amet_2858 a494e2c32abcbcd43ae21f9391fcbac5 448 Gene3D G3DSA:2.30.42.10 6 83 2.2E-5 T 12-10-2018 Amet_2858 a494e2c32abcbcd43ae21f9391fcbac5 448 SUPERFAMILY SSF50156 9 96 5.52E-9 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Amet_2858 a494e2c32abcbcd43ae21f9391fcbac5 448 SUPERFAMILY SSF102114 91 237 3.34E-13 T 12-10-2018 Amet_2858 a494e2c32abcbcd43ae21f9391fcbac5 448 Pfam PF04459 Protein of unknown function (DUF512) 224 427 5.5E-73 T 12-10-2018 IPR007549 Domain of unknown function DUF512 Amet_2858 a494e2c32abcbcd43ae21f9391fcbac5 448 Gene3D G3DSA:3.20.20.70 127 283 1.5E-8 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2471 8a092956af1a047a998b761a5744f444 413 Gene3D G3DSA:2.40.30.10 320 407 1.3E-30 T 12-10-2018 Amet_2471 8a092956af1a047a998b761a5744f444 413 Pfam PF01136 Peptidase family U32 76 309 4.3E-105 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Amet_2471 8a092956af1a047a998b761a5744f444 413 Pfam PF16325 Peptidase family U32 C-terminal domain 322 404 3.3E-27 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal Amet_2471 8a092956af1a047a998b761a5744f444 413 SUPERFAMILY SSF51412 12 148 1.83E-5 T 12-10-2018 Amet_2471 8a092956af1a047a998b761a5744f444 413 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Amet_3594 17d4903412fc716ced4c4e8cbf3650da 105 Gene3D G3DSA:3.40.30.10 1 105 1.5E-27 T 12-10-2018 Amet_3594 17d4903412fc716ced4c4e8cbf3650da 105 Pfam PF00085 Thioredoxin 3 103 2.0E-24 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 Amet_3594 17d4903412fc716ced4c4e8cbf3650da 105 PIRSF PIRSF000077 1 105 6.8E-25 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Amet_3594 17d4903412fc716ced4c4e8cbf3650da 105 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Amet_3594 17d4903412fc716ced4c4e8cbf3650da 105 SUPERFAMILY SSF52833 4 103 1.2E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_2017 a215c4809edc3f490ef5d634a2ee2663 258 SUPERFAMILY SSF52540 1 256 1.71E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2017 a215c4809edc3f490ef5d634a2ee2663 258 PIRSF PIRSF005647 1 257 1.3E-80 T 12-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type Amet_2017 a215c4809edc3f490ef5d634a2ee2663 258 Gene3D G3DSA:3.40.50.300 1 256 8.7E-59 T 12-10-2018 Amet_2017 a215c4809edc3f490ef5d634a2ee2663 258 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 233 3.4E-16 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 SUPERFAMILY SSF56235 2 234 4.29E-76 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 4.1E-252 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 41.338 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 Gene3D G3DSA:3.60.20.10 2 240 1.9E-81 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 Pfam PF13522 Glutamine amidotransferase domain 64 191 2.1E-21 T 12-10-2018 Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 Pfam PF01380 SIS domain 465 590 4.8E-27 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 Pfam PF01380 SIS domain 289 415 3.9E-33 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 Gene3D G3DSA:3.40.50.10490 446 593 7.7E-150 T 12-10-2018 Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 Gene3D G3DSA:3.40.50.10490 246 607 7.7E-150 T 12-10-2018 Amet_4299 73e1ec7161cc07462f94565c78b22f92 608 SUPERFAMILY SSF53697 244 608 3.06E-113 T 12-10-2018 Amet_1433 72567c658bc1ac7bb9305e5997952612 154 Pfam PF04073 Aminoacyl-tRNA editing domain 28 143 1.1E-24 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Amet_1433 72567c658bc1ac7bb9305e5997952612 154 SUPERFAMILY SSF55826 7 152 3.53E-25 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amet_1433 72567c658bc1ac7bb9305e5997952612 154 Gene3D G3DSA:3.90.960.10 5 153 8.9E-29 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 SUPERFAMILY SSF56235 22 446 8.59E-143 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 SUPERFAMILY SSF51395 455 1217 5.5E-249 T 12-10-2018 Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 Gene3D G3DSA:3.60.20.10 22 560 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 Pfam PF00310 Glutamine amidotransferases class-II 22 442 2.2E-176 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 SUPERFAMILY SSF69336 1231 1493 3.01E-94 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 Pfam PF01493 GXGXG motif 1261 1447 9.6E-83 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 Gene3D G3DSA:3.20.20.70 447 812 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 Gene3D G3DSA:3.20.20.70 496 1198 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 Pfam PF01645 Conserved region in glutamate synthase 814 1181 1.1E-148 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 Pfam PF04898 Glutamate synthase central domain 472 757 1.5E-110 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Amet_3397 29bf0882c5fc4d9b165ce299d24cad4a 1497 Gene3D G3DSA:2.160.20.60 1233 1496 3.2E-110 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Amet_3271 63be81dbdea4332de2d4c0bc256f29fe 71 Pfam PF00403 Heavy-metal-associated domain 5 64 2.3E-16 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amet_3271 63be81dbdea4332de2d4c0bc256f29fe 71 Gene3D G3DSA:3.30.70.100 3 68 4.1E-20 T 12-10-2018 Amet_3271 63be81dbdea4332de2d4c0bc256f29fe 71 PRINTS PR00944 Copper ion binding protein signature 14 27 1.3E-5 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amet_3271 63be81dbdea4332de2d4c0bc256f29fe 71 PRINTS PR00944 Copper ion binding protein signature 52 65 1.3E-5 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amet_3271 63be81dbdea4332de2d4c0bc256f29fe 71 PRINTS PR00944 Copper ion binding protein signature 2 14 1.3E-5 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amet_3271 63be81dbdea4332de2d4c0bc256f29fe 71 PRINTS PR00944 Copper ion binding protein signature 27 40 1.3E-5 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amet_3271 63be81dbdea4332de2d4c0bc256f29fe 71 SUPERFAMILY SSF55008 1 66 2.36E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_3271 63be81dbdea4332de2d4c0bc256f29fe 71 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Amet_2955 c3f94933a1b33494858b14ef762160c6 636 Gene3D G3DSA:3.20.20.240 338 578 7.9E-11 T 12-10-2018 Amet_2955 c3f94933a1b33494858b14ef762160c6 636 SUPERFAMILY SSF51703 381 607 1.18E-6 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Gene3D G3DSA:3.40.950.20 248 288 3.2E-6 T 12-10-2018 Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Gene3D G3DSA:3.40.50.1780 289 316 3.2E-6 T 12-10-2018 Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 SMART SM00091 407 473 0.0052 T 12-10-2018 IPR000014 PAS domain Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 72 294 5.5E-51 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Gene3D G3DSA:3.40.50.1780 56 231 2.7E-38 T 12-10-2018 Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Gene3D G3DSA:3.30.70.20 7 55 2.7E-38 T 12-10-2018 Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Pfam PF04060 Putative Fe-S cluster 370 399 2.1E-7 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 SUPERFAMILY SSF54862 6 68 3.19E-15 T 12-10-2018 Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Gene3D G3DSA:3.30.450.20 401 510 1.4E-7 T 12-10-2018 Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Pfam PF00037 4Fe-4S binding domain 34 56 1.1E-4 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Gene3D G3DSA:3.40.950.10 113 158 2.7E-38 T 12-10-2018 Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 SUPERFAMILY SSF53920 39 321 2.88E-56 T 12-10-2018 IPR009016 Iron hydrogenase Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 SUPERFAMILY SSF55785 405 468 1.01E-6 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4067 352077c6ec16e64c6365c8e9741ae1e9 569 Pfam PF13188 PAS domain 412 462 1.3E-4 T 12-10-2018 IPR000014 PAS domain Amet_0898 57292b0743f8992f6d1cd867f3d71cc0 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 302 1.2E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_0898 57292b0743f8992f6d1cd867f3d71cc0 310 Gene3D G3DSA:1.10.3720.10 28 301 3.3E-61 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0898 57292b0743f8992f6d1cd867f3d71cc0 310 SUPERFAMILY SSF161098 33 310 4.95E-69 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 69 3.1E-17 T 12-10-2018 IPR004176 Clp, N-terminal Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 143 2.5E-16 T 12-10-2018 IPR004176 Clp, N-terminal Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Pfam PF07724 AAA domain (Cdc48 subfamily) 539 713 4.7E-59 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Gene3D G3DSA:4.10.860.10 412 470 6.6E-46 T 12-10-2018 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 618 636 1.5E-41 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 589 607 1.5E-41 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 544 562 1.5E-41 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 665 1.5E-41 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 SMART SM00382 540 686 8.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4512 b353ac3f71f163353174d84053b05f7e 812 SMART SM00382 203 348 1.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Gene3D G3DSA:1.10.8.60 349 484 6.6E-46 T 12-10-2018 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Gene3D G3DSA:1.10.1780.10 2 149 5.8E-53 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 208 324 1.8E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Gene3D G3DSA:3.40.50.300 154 346 2.7E-72 T 12-10-2018 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Gene3D G3DSA:3.40.50.300 492 718 6.4E-89 T 12-10-2018 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 SUPERFAMILY SSF52540 489 803 1.01E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4512 b353ac3f71f163353174d84053b05f7e 812 SUPERFAMILY SSF81923 6 145 4.41E-29 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 SMART SM01086 720 809 1.1E-38 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Amet_4512 b353ac3f71f163353174d84053b05f7e 812 SUPERFAMILY SSF52540 164 478 6.17E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4512 b353ac3f71f163353174d84053b05f7e 812 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 574 592 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 298 310 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Gene3D G3DSA:1.10.8.60 720 811 2.6E-30 T 12-10-2018 Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 720 800 3.2E-28 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Amet_4512 b353ac3f71f163353174d84053b05f7e 812 Pfam PF02151 UvrB/uvrC motif 422 454 3.1E-6 T 12-10-2018 IPR001943 UVR domain GO:0005515 Amet_2689 f937c0062de01d153efd61516cb63f97 232 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Amet_2689 f937c0062de01d153efd61516cb63f97 232 Gene3D G3DSA:1.10.287.610 97 152 3.0E-95 T 12-10-2018 Amet_2689 f937c0062de01d153efd61516cb63f97 232 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.0E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2689 f937c0062de01d153efd61516cb63f97 232 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.0E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2689 f937c0062de01d153efd61516cb63f97 232 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.0E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2689 f937c0062de01d153efd61516cb63f97 232 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.0E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2689 f937c0062de01d153efd61516cb63f97 232 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.0E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2689 f937c0062de01d153efd61516cb63f97 232 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.0E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2689 f937c0062de01d153efd61516cb63f97 232 Pfam PF00318 Ribosomal protein S2 9 224 1.7E-102 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2689 f937c0062de01d153efd61516cb63f97 232 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Amet_2689 f937c0062de01d153efd61516cb63f97 232 Gene3D G3DSA:3.40.50.10490 10 214 3.0E-95 T 12-10-2018 Amet_2689 f937c0062de01d153efd61516cb63f97 232 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.567 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2689 f937c0062de01d153efd61516cb63f97 232 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.6E-111 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2689 f937c0062de01d153efd61516cb63f97 232 SUPERFAMILY SSF52313 6 229 1.24E-100 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Amet_2483 aa5bfb1d6ade9b825d64b015cbd6da44 144 Gene3D G3DSA:3.30.700.10 8 140 4.5E-10 T 12-10-2018 Amet_2483 aa5bfb1d6ade9b825d64b015cbd6da44 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 4.3E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_2483 aa5bfb1d6ade9b825d64b015cbd6da44 144 SUPERFAMILY SSF54523 8 111 9.42E-12 T 12-10-2018 Amet_2483 aa5bfb1d6ade9b825d64b015cbd6da44 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 1.1E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_2483 aa5bfb1d6ade9b825d64b015cbd6da44 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_2483 aa5bfb1d6ade9b825d64b015cbd6da44 144 PIRSF PIRSF021292 2 142 6.3E-16 T 12-10-2018 IPR016785 ComG operon protein 4 GO:0030420 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 SUPERFAMILY SSF54686 1 138 1.83E-59 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.6E-60 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.5E-52 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 Gene3D G3DSA:3.90.1170.10 1 147 4.6E-57 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.6E-39 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.6E-39 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.6E-39 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.6E-39 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4471 15b6ed72accd3562bdd70bf27788e23a 147 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 40.925 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4732 a3b2435ca984d21068b1c2df86ad91d3 96 Pfam PF01527 Transposase 6 82 6.9E-11 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Amet_4732 a3b2435ca984d21068b1c2df86ad91d3 96 Gene3D G3DSA:1.10.10.60 12 92 3.6E-6 T 12-10-2018 Amet_4732 a3b2435ca984d21068b1c2df86ad91d3 96 SUPERFAMILY SSF46689 8 93 1.34E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4096 d5a6ec68c846b3482c7f47b13c242f8c 320 Pfam PF13353 4Fe-4S single cluster domain 20 121 2.6E-9 T 12-10-2018 Amet_4096 d5a6ec68c846b3482c7f47b13c242f8c 320 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_4096 d5a6ec68c846b3482c7f47b13c242f8c 320 SUPERFAMILY SSF102114 3 270 3.27E-75 T 12-10-2018 Amet_4096 d5a6ec68c846b3482c7f47b13c242f8c 320 Pfam PF06463 Molybdenum Cofactor Synthesis C 181 302 5.7E-35 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_4096 d5a6ec68c846b3482c7f47b13c242f8c 320 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 1 320 38.951 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_4096 d5a6ec68c846b3482c7f47b13c242f8c 320 Gene3D G3DSA:3.20.20.70 1 320 2.2E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_4096 d5a6ec68c846b3482c7f47b13c242f8c 320 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 320 6.6E-113 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_4096 d5a6ec68c846b3482c7f47b13c242f8c 320 Pfam PF04055 Radical SAM superfamily 14 175 1.3E-31 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_4096 d5a6ec68c846b3482c7f47b13c242f8c 320 SMART SM00729 10 215 1.4E-12 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_1573 68e16e5c5c8d8082a774a2fbf8032b23 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 208 366 3.2E-47 T 12-10-2018 IPR000160 GGDEF domain Amet_1573 68e16e5c5c8d8082a774a2fbf8032b23 381 Gene3D G3DSA:3.30.70.270 199 367 1.5E-50 T 12-10-2018 Amet_1573 68e16e5c5c8d8082a774a2fbf8032b23 381 SUPERFAMILY SSF55073 215 365 2.2E-44 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_1573 68e16e5c5c8d8082a774a2fbf8032b23 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 362 9.1E-45 T 12-10-2018 IPR000160 GGDEF domain Amet_1573 68e16e5c5c8d8082a774a2fbf8032b23 381 SMART SM00267 199 367 1.6E-52 T 12-10-2018 IPR000160 GGDEF domain Amet_0686 bad86b3a927cdea050fc1a863b2fdee8 316 Pfam PF11392 Protein of unknown function (DUF2877) 188 300 1.1E-27 T 12-10-2018 IPR021530 Protein of unknown function DUF2877 Amet_2059 f7537a2ff53ef8ce806d58e75e6e30e5 194 Gene3D G3DSA:2.60.120.10 68 194 2.6E-45 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_2059 f7537a2ff53ef8ce806d58e75e6e30e5 194 SUPERFAMILY SSF51182 31 173 9.91E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Amet_2059 f7537a2ff53ef8ce806d58e75e6e30e5 194 Pfam PF07883 Cupin domain 93 168 3.4E-14 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Amet_3671 4ff64c27c378325eacf32b8c1e3039a3 451 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 382 413 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site Amet_3671 4ff64c27c378325eacf32b8c1e3039a3 451 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 88 451 3.0E-25 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Amet_3671 4ff64c27c378325eacf32b8c1e3039a3 451 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 18 444 3.6E-101 T 12-10-2018 Amet_3671 4ff64c27c378325eacf32b8c1e3039a3 451 Gene3D G3DSA:3.40.1350.30 126 286 3.5E-112 T 12-10-2018 Amet_3671 4ff64c27c378325eacf32b8c1e3039a3 451 SUPERFAMILY SSF50249 7 65 3.17E-6 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_3671 4ff64c27c378325eacf32b8c1e3039a3 451 Gene3D G3DSA:2.40.50.140 2 78 1.7E-11 T 12-10-2018 Amet_3671 4ff64c27c378325eacf32b8c1e3039a3 451 Gene3D G3DSA:3.40.50.150 80 446 3.5E-112 T 12-10-2018 Amet_3671 4ff64c27c378325eacf32b8c1e3039a3 451 SUPERFAMILY SSF53335 69 451 4.26E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_3671 4ff64c27c378325eacf32b8c1e3039a3 451 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 434 444 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 Gene3D G3DSA:3.40.1190.10 102 345 4.4E-75 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 Pfam PF01225 Mur ligase family, catalytic domain 26 74 3.2E-8 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 Pfam PF08245 Mur ligase middle domain 111 322 1.3E-46 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 SUPERFAMILY SSF53244 342 488 3.36E-17 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 Pfam PF02875 Mur ligase family, glutamate ligase domain 343 401 8.1E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 26 395 1.8E-91 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 SUPERFAMILY SSF63418 20 102 5.49E-19 T 12-10-2018 IPR035911 MurE/MurF, N-terminal Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 Gene3D G3DSA:3.40.1390.10 3 101 1.8E-21 T 12-10-2018 Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 Gene3D G3DSA:3.90.190.20 346 493 7.4E-12 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_1618 cfdcc8617b93b3ce5d1a2d3fb1ccba91 513 SUPERFAMILY SSF53623 102 342 9.42E-64 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_0026 f43083f7d96502c6f325020234a75418 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 88 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Amet_0026 f43083f7d96502c6f325020234a75418 151 Gene3D G3DSA:3.40.140.10 1 151 3.9E-63 T 12-10-2018 Amet_0026 f43083f7d96502c6f325020234a75418 151 SUPERFAMILY SSF53927 3 149 4.68E-56 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amet_0026 f43083f7d96502c6f325020234a75418 151 Pfam PF14437 MafB19-like deaminase 5 147 2.1E-43 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Amet_0026 f43083f7d96502c6f325020234a75418 151 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 6 147 47.38 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Amet_3958 268e92be759aec9b049d9b1437d48a88 188 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 115 173 9.8E-11 T 12-10-2018 Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 SUPERFAMILY SSF55383 64 154 3.99E-23 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 Gene3D G3DSA:3.30.457.10 75 146 7.1E-14 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 Gene3D G3DSA:3.30.457.10 22 74 1.8E-6 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 Pfam PF07833 Copper amine oxidase N-terminal domain 61 159 7.3E-32 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 Pfam PF07833 Copper amine oxidase N-terminal domain 24 78 1.7E-7 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 SUPERFAMILY SSF53187 286 468 1.04E-55 T 12-10-2018 Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 Pfam PF11741 AMIN domain 179 271 3.1E-14 T 12-10-2018 IPR021731 AMIN domain Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 Gene3D G3DSA:2.60.40.3500 152 275 1.3E-17 T 12-10-2018 Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 SMART SM00646 348 465 1.3E-37 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 288 464 8.4E-53 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_1886 4e5169a01476d0c46ab8f351b33eb2e4 469 Gene3D G3DSA:3.40.630.40 285 469 1.0E-62 T 12-10-2018 Amet_1173 1af32ec8854925a2fe939b1f6320f21d 248 Pfam PF00005 ABC transporter 20 168 9.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1173 1af32ec8854925a2fe939b1f6320f21d 248 Gene3D G3DSA:3.40.50.300 1 242 7.9E-62 T 12-10-2018 Amet_1173 1af32ec8854925a2fe939b1f6320f21d 248 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1173 1af32ec8854925a2fe939b1f6320f21d 248 SMART SM00382 29 224 2.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1173 1af32ec8854925a2fe939b1f6320f21d 248 SUPERFAMILY SSF52540 3 224 5.83E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3077 4eb320d345d6de5a53c72c20b78628e5 320 SUPERFAMILY SSF51556 1 319 2.21E-77 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_3077 4eb320d345d6de5a53c72c20b78628e5 320 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 318 1.2E-88 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Amet_3077 4eb320d345d6de5a53c72c20b78628e5 320 Gene3D G3DSA:3.20.20.140 1 320 4.2E-98 T 12-10-2018 Amet_3317 c8caba7d68b2e097860325c3d0914426 541 Gene3D G3DSA:2.115.10.20 1 327 5.0E-108 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amet_3317 c8caba7d68b2e097860325c3d0914426 541 Gene3D G3DSA:2.60.120.200 328 535 3.1E-64 T 12-10-2018 Amet_3317 c8caba7d68b2e097860325c3d0914426 541 Pfam PF04616 Glycosyl hydrolases family 43 4 302 8.9E-107 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Amet_3317 c8caba7d68b2e097860325c3d0914426 541 SUPERFAMILY SSF49899 327 534 2.41E-71 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amet_3317 c8caba7d68b2e097860325c3d0914426 541 SUPERFAMILY SSF75005 4 321 6.14E-103 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 SUPERFAMILY SSF52540 148 392 4.26E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 ProSitePatterns PS00674 AAA-protein family signature. 294 312 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 109 584 4.6E-157 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 Gene3D G3DSA:1.10.8.60 325 399 9.1E-22 T 12-10-2018 Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 Gene3D G3DSA:1.20.58.760 400 589 8.7E-48 T 12-10-2018 Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 323 7.9E-42 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 Pfam PF01434 Peptidase family M41 386 583 6.5E-44 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 SMART SM00382 187 326 5.8E-23 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 SUPERFAMILY SSF140990 409 587 8.37E-46 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 Gene3D G3DSA:3.40.50.300 141 323 8.8E-65 T 12-10-2018 Amet_3170 9d0b81d15f4099ecca35bf50dc382e8d 590 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 8 585 29.903 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Amet_2796 85f496f5280d94f40a4c1164ad7cfe71 310 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 301 4.8E-96 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2796 85f496f5280d94f40a4c1164ad7cfe71 310 Pfam PF01479 S4 domain 15 61 4.0E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2796 85f496f5280d94f40a4c1164ad7cfe71 310 Pfam PF00849 RNA pseudouridylate synthase 88 241 9.7E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2796 85f496f5280d94f40a4c1164ad7cfe71 310 SUPERFAMILY SSF55120 74 303 8.02E-74 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2796 85f496f5280d94f40a4c1164ad7cfe71 310 SUPERFAMILY SSF55174 15 101 3.2E-11 T 12-10-2018 Amet_2796 85f496f5280d94f40a4c1164ad7cfe71 310 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2796 85f496f5280d94f40a4c1164ad7cfe71 310 SMART SM00363 15 79 6.8E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2796 85f496f5280d94f40a4c1164ad7cfe71 310 Gene3D G3DSA:3.10.290.10 4 71 3.2E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_2796 85f496f5280d94f40a4c1164ad7cfe71 310 Gene3D G3DSA:3.30.2350.10 81 305 5.9E-70 T 12-10-2018 Amet_2189 4519a7a7d2ddfd8b56e438dcd9f0f033 257 Pfam PF01881 CRISPR associated protein Cas6 113 256 3.1E-27 T 12-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Amet_2189 4519a7a7d2ddfd8b56e438dcd9f0f033 257 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 61 255 6.6E-28 T 12-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Amet_2189 4519a7a7d2ddfd8b56e438dcd9f0f033 257 Gene3D G3DSA:3.30.70.1900 139 257 3.9E-20 T 12-10-2018 Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 SUPERFAMILY SSF102114 92 268 6.28E-17 T 12-10-2018 Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 10 293 4.0E-92 T 12-10-2018 Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 84 95 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 Pfam PF13353 4Fe-4S single cluster domain 83 193 2.2E-6 T 12-10-2018 Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 PIRSF PIRSF000371 1 300 4.2E-85 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 Pfam PF04055 Radical SAM superfamily 25 234 8.5E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 SUPERFAMILY SSF54862 9 98 4.19E-13 T 12-10-2018 Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 Gene3D G3DSA:3.20.20.70 81 299 1.3E-57 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1987 3bc8ddb2ac1b1ca31bae049e3a942950 301 Gene3D G3DSA:3.20.20.70 3 66 1.6E-12 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1125 5daccceabbe94a267779489b7691eb7d 112 Gene3D G3DSA:2.60.120.10 3 108 6.7E-37 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_1125 5daccceabbe94a267779489b7691eb7d 112 SUPERFAMILY SSF51182 5 111 4.85E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Amet_1125 5daccceabbe94a267779489b7691eb7d 112 Pfam PF07883 Cupin domain 42 109 1.2E-10 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Amet_4421 554670817bb0dd910c6b2911e0f35502 264 PIRSF PIRSF019254 1 264 3.4E-100 T 12-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 Amet_4421 554670817bb0dd910c6b2911e0f35502 264 Gene3D G3DSA:3.30.2400.30 2 253 1.6E-75 T 12-10-2018 Amet_4421 554670817bb0dd910c6b2911e0f35502 264 Pfam PF04454 Encapsulating protein for peroxidase 1 250 1.2E-84 T 12-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 Amet_4421 554670817bb0dd910c6b2911e0f35502 264 Gene3D G3DSA:3.30.2320.10 132 259 1.6E-75 T 12-10-2018 Amet_4121 d0eb0e7eba480f083829ac939e9ede9f 316 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 4 313 6.2E-81 T 12-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Amet_4121 d0eb0e7eba480f083829ac939e9ede9f 316 Gene3D G3DSA:3.30.420.40 4 310 8.0E-101 T 12-10-2018 Amet_4121 d0eb0e7eba480f083829ac939e9ede9f 316 SUPERFAMILY SSF53067 1 313 3.53E-70 T 12-10-2018 Amet_4121 d0eb0e7eba480f083829ac939e9ede9f 316 Gene3D G3DSA:3.30.420.40 126 298 8.0E-101 T 12-10-2018 Amet_4121 d0eb0e7eba480f083829ac939e9ede9f 316 Pfam PF00480 ROK family 3 314 2.7E-75 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 Gene3D G3DSA:3.30.420.40 151 314 2.4E-136 T 12-10-2018 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 Gene3D G3DSA:3.90.640.10 183 256 2.4E-136 T 12-10-2018 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 333 2.4E-160 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 1.5E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 1.5E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 1.5E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 1.5E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 1.5E-65 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 SUPERFAMILY SSF53067 7 145 1.07E-44 T 12-10-2018 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 SUPERFAMILY SSF53067 146 327 1.73E-50 T 12-10-2018 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 Pfam PF06723 MreB/Mbl protein 9 333 2.0E-156 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_2290 b6f30cae149bad1a2e26edf9219b46dc 343 Gene3D G3DSA:3.30.420.40 11 324 2.4E-136 T 12-10-2018 Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 Gene3D G3DSA:3.30.420.40 321 572 7.6E-86 T 12-10-2018 Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 Gene3D G3DSA:3.30.420.40 4 259 2.3E-68 T 12-10-2018 Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 321 572 4.7E-40 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 259 8.9E-30 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 SUPERFAMILY SSF53067 320 572 1.19E-38 T 12-10-2018 Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 321 571 1.6E-51 T 12-10-2018 IPR008275 CoA enzyme activase Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 2 258 5.9E-39 T 12-10-2018 IPR008275 CoA enzyme activase Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 Gene3D G3DSA:3.30.420.40 415 555 7.6E-86 T 12-10-2018 Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 Gene3D G3DSA:3.30.420.40 96 244 2.3E-68 T 12-10-2018 Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 SUPERFAMILY SSF53067 2 259 3.36E-34 T 12-10-2018 Amet_1127 72abaaea7f547104feabbc20b3c4813c 1350 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 633 848 1.6E-56 T 12-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 Gene3D G3DSA:3.40.47.10 6 275 2.6E-157 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 PIRSF PIRSF000429 1 392 2.3E-134 T 12-10-2018 IPR002155 Thiolase GO:0016747 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 Gene3D G3DSA:3.40.47.10 126 389 2.6E-157 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 SUPERFAMILY SSF53901 270 391 3.78E-42 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 5.1E-147 T 12-10-2018 IPR002155 Thiolase GO:0016747 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 1.5E-49 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 SUPERFAMILY SSF53901 3 269 1.39E-91 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_4630 899396a4bebca8b555d2ace8d348f0f5 392 Pfam PF00108 Thiolase, N-terminal domain 4 261 6.0E-106 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Amet_2058 af5215159f6ff09703bfc0b92ae48455 586 SUPERFAMILY SSF48452 159 301 2.68E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_2058 af5215159f6ff09703bfc0b92ae48455 586 SUPERFAMILY SSF53955 437 584 4.13E-40 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Amet_2058 af5215159f6ff09703bfc0b92ae48455 586 Pfam PF01464 Transglycosylase SLT domain 444 548 1.9E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Amet_2058 af5215159f6ff09703bfc0b92ae48455 586 Gene3D G3DSA:1.10.530.10 435 586 6.3E-44 T 12-10-2018 Amet_2058 af5215159f6ff09703bfc0b92ae48455 586 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 459 487 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Amet_1420 e61aff7e9069cebde6e933d9c5810690 150 Pfam PF00583 Acetyltransferase (GNAT) family 49 129 6.4E-11 T 12-10-2018 IPR000182 GNAT domain Amet_1420 e61aff7e9069cebde6e933d9c5810690 150 Gene3D G3DSA:3.40.630.30 3 138 6.4E-17 T 12-10-2018 Amet_1420 e61aff7e9069cebde6e933d9c5810690 150 SUPERFAMILY SSF55729 10 147 1.3E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 Pfam PF01769 Divalent cation transporter 323 444 2.2E-24 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 SUPERFAMILY SSF161093 280 451 1.31E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 SUPERFAMILY SSF54631 129 265 3.03E-31 T 12-10-2018 Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 SMART SM00924 27 130 5.7E-31 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 SUPERFAMILY SSF158791 2 127 8.5E-28 T 12-10-2018 Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 SMART SM00116 201 249 4.5E-7 T 12-10-2018 IPR000644 CBS domain Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 SMART SM00116 137 190 120.0 T 12-10-2018 IPR000644 CBS domain Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 Gene3D G3DSA:3.10.580.10 126 254 1.2E-44 T 12-10-2018 Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 Gene3D G3DSA:1.25.60.10 2 125 2.3E-25 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 Pfam PF00571 CBS domain 196 248 5.4E-8 T 12-10-2018 IPR000644 CBS domain Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 Pfam PF00571 CBS domain 130 188 2.7E-6 T 12-10-2018 IPR000644 CBS domain Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 Pfam PF03448 MgtE intracellular N domain 30 128 4.1E-24 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 TIGRFAM TIGR00400 mgtE: magnesium transporter 8 452 1.8E-133 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Amet_3246 0e5790aac76c04b781a625fa75ac5720 455 Gene3D G3DSA:1.10.357.20 276 451 9.3E-50 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 Gene3D G3DSA:3.90.1170.50 33 130 3.7E-102 T 12-10-2018 Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 129 3.5E-26 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 Gene3D G3DSA:3.30.365.10 467 620 1.1E-114 T 12-10-2018 Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 Gene3D G3DSA:3.30.365.10 17 290 3.7E-102 T 12-10-2018 Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 704 1.3E-161 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 SUPERFAMILY SSF56003 161 764 2.49E-178 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 Gene3D G3DSA:3.30.365.10 378 760 1.1E-114 T 12-10-2018 Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 SUPERFAMILY SSF54665 2 148 1.01E-36 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 SMART SM01008 18 130 7.5E-36 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_0607 f05cca9c0b2031c1a508bd70deb9a24f 764 Gene3D G3DSA:3.30.365.10 131 367 3.7E-102 T 12-10-2018 Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 SUPERFAMILY SSF48008 82 208 9.15E-15 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 Pfam PF07729 FCD domain 90 209 1.4E-16 T 12-10-2018 IPR011711 GntR, C-terminal Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 Gene3D G3DSA:1.20.120.530 82 215 8.6E-16 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 SMART SM00345 18 76 7.6E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 SUPERFAMILY SSF46785 9 80 3.89E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 76 6.1E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 SMART SM00895 86 210 2.1E-6 T 12-10-2018 IPR011711 GntR, C-terminal Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 Gene3D G3DSA:1.10.10.10 10 77 2.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 6.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3789 f94ec7f930a452b198c42304b2c8c128 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 6.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4191 19eaa8f4b43471190e4536d206fbcc0e 324 Gene3D G3DSA:3.30.420.40 5 299 5.7E-80 T 12-10-2018 Amet_4191 19eaa8f4b43471190e4536d206fbcc0e 324 SUPERFAMILY SSF53067 1 111 1.94E-18 T 12-10-2018 Amet_4191 19eaa8f4b43471190e4536d206fbcc0e 324 SUPERFAMILY SSF53067 116 310 8.64E-47 T 12-10-2018 Amet_4191 19eaa8f4b43471190e4536d206fbcc0e 324 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 299 3.9E-37 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Amet_4191 19eaa8f4b43471190e4536d206fbcc0e 324 Gene3D G3DSA:3.30.420.40 114 286 5.7E-80 T 12-10-2018 Amet_1161 ecd5f500481af5648cddf222e289705a 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 276 2.3E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1161 ecd5f500481af5648cddf222e289705a 289 Gene3D G3DSA:1.10.3720.10 89 288 4.4E-32 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1161 ecd5f500481af5648cddf222e289705a 289 SUPERFAMILY SSF161098 94 281 1.27E-34 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1161 ecd5f500481af5648cddf222e289705a 289 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 49 288 3.6E-74 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Amet_2684 485364fa3450b989b67578377c620d8c 248 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 192 209 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Amet_2684 485364fa3450b989b67578377c620d8c 248 Pfam PF01255 Putative undecaprenyl diphosphate synthase 26 246 1.1E-86 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amet_2684 485364fa3450b989b67578377c620d8c 248 SUPERFAMILY SSF64005 16 242 1.96E-91 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Amet_2684 485364fa3450b989b67578377c620d8c 248 Gene3D G3DSA:3.40.1180.10 3 248 1.7E-101 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Amet_2684 485364fa3450b989b67578377c620d8c 248 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 19 247 41.632 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amet_2684 485364fa3450b989b67578377c620d8c 248 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 19 246 5.4E-93 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amet_2953 64f65b5f14fa09f1637eabd349b46397 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 231 247 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amet_2953 64f65b5f14fa09f1637eabd349b46397 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Amet_2953 64f65b5f14fa09f1637eabd349b46397 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 292 1.1E-63 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amet_2953 64f65b5f14fa09f1637eabd349b46397 324 Gene3D G3DSA:3.40.50.720 15 321 1.2E-121 T 12-10-2018 Amet_2953 64f65b5f14fa09f1637eabd349b46397 324 SUPERFAMILY SSF52283 1 126 1.63E-31 T 12-10-2018 Amet_2953 64f65b5f14fa09f1637eabd349b46397 324 Gene3D G3DSA:3.40.50.720 102 291 1.2E-121 T 12-10-2018 Amet_2953 64f65b5f14fa09f1637eabd349b46397 324 SUPERFAMILY SSF51735 106 293 5.24E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2953 64f65b5f14fa09f1637eabd349b46397 324 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amet_2953 64f65b5f14fa09f1637eabd349b46397 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 26 323 4.0E-26 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Amet_1633 fa041bb52dbf6e954e37ea006f393d6d 142 ProSitePatterns PS00938 Initiation factor 3 signature. 30 43 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Amet_1633 fa041bb52dbf6e954e37ea006f393d6d 142 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 4 141 7.8E-60 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amet_1633 fa041bb52dbf6e954e37ea006f393d6d 142 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 55 140 5.2E-36 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Amet_1633 fa041bb52dbf6e954e37ea006f393d6d 142 SUPERFAMILY SSF55200 54 141 3.66E-32 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Amet_1633 fa041bb52dbf6e954e37ea006f393d6d 142 Gene3D G3DSA:3.10.20.80 1 47 9.4E-22 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amet_1633 fa041bb52dbf6e954e37ea006f393d6d 142 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 2 142 22.73 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amet_1633 fa041bb52dbf6e954e37ea006f393d6d 142 SUPERFAMILY SSF54364 3 50 2.09E-19 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amet_1633 fa041bb52dbf6e954e37ea006f393d6d 142 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 48 4.4E-22 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Amet_1633 fa041bb52dbf6e954e37ea006f393d6d 142 Gene3D G3DSA:3.30.110.10 48 142 1.5E-36 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 Gene3D G3DSA:3.30.830.10 530 981 2.7E-138 T 12-10-2018 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 SUPERFAMILY SSF63411 296 554 2.0E-52 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 Pfam PF00675 Insulinase (Peptidase family M16) 94 173 1.2E-7 T 12-10-2018 IPR011765 Peptidase M16, N-terminal Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 Gene3D G3DSA:3.30.830.10 564 813 2.7E-138 T 12-10-2018 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 SMART SM01264 497 747 2.1E-91 T 12-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 SUPERFAMILY SSF63411 810 1014 3.67E-34 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 Gene3D G3DSA:3.30.830.10 289 520 8.2E-61 T 12-10-2018 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 Gene3D G3DSA:3.30.830.10 28 288 2.8E-85 T 12-10-2018 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 Pfam PF05193 Peptidase M16 inactive domain 241 425 2.0E-21 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 Pfam PF08367 Peptidase M16C associated 497 747 5.5E-67 T 12-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 SUPERFAMILY SSF63411 556 806 2.24E-63 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_1059 7de09f90deb8d6da38649e19f7fa274c 1101 SUPERFAMILY SSF63411 42 289 6.5E-47 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_2789 8f2e0c9d6613db15a7514659a840db3d 68 Pfam PF01192 RNA polymerase Rpb6 8 60 2.2E-16 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Amet_2789 8f2e0c9d6613db15a7514659a840db3d 68 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 15.211 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_2789 8f2e0c9d6613db15a7514659a840db3d 68 SUPERFAMILY SSF63562 1 67 1.26E-24 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Amet_2789 8f2e0c9d6613db15a7514659a840db3d 68 Gene3D G3DSA:3.90.940.10 1 68 2.7E-23 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Amet_2789 8f2e0c9d6613db15a7514659a840db3d 68 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 6.9E-14 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_2789 8f2e0c9d6613db15a7514659a840db3d 68 SMART SM01409 8 60 1.7E-16 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Amet_0681 64feeda13ce21e1bce4ff8895cd12256 284 SMART SM01092 179 277 2.0E-27 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Amet_0681 64feeda13ce21e1bce4ff8895cd12256 284 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 173 6.0E-48 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Amet_0681 64feeda13ce21e1bce4ff8895cd12256 284 Gene3D G3DSA:3.30.390.50 177 280 8.3E-27 T 12-10-2018 Amet_0681 64feeda13ce21e1bce4ff8895cd12256 284 SUPERFAMILY SSF56176 1 173 6.54E-52 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_0681 64feeda13ce21e1bce4ff8895cd12256 284 Gene3D G3DSA:3.30.465.10 1 174 1.9E-55 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_0681 64feeda13ce21e1bce4ff8895cd12256 284 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 181 276 1.0E-19 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Amet_0681 64feeda13ce21e1bce4ff8895cd12256 284 SUPERFAMILY SSF55447 181 280 3.4E-23 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Amet_2523 fb36d03f531fce486135d1deebbc5803 294 SUPERFAMILY SSF56349 8 288 6.47E-55 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_2523 fb36d03f531fce486135d1deebbc5803 294 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 85 1.5E-17 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amet_2523 fb36d03f531fce486135d1deebbc5803 294 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 294 1.6E-106 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Amet_2523 fb36d03f531fce486135d1deebbc5803 294 Pfam PF00589 Phage integrase family 111 280 1.1E-45 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_2523 fb36d03f531fce486135d1deebbc5803 294 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 294 52.743 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Amet_2523 fb36d03f531fce486135d1deebbc5803 294 Gene3D G3DSA:1.10.443.10 109 288 8.1E-59 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_2523 fb36d03f531fce486135d1deebbc5803 294 Gene3D G3DSA:1.10.150.130 4 107 4.7E-23 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1061 12.896 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 SUPERFAMILY SSF56059 128 399 4.07E-105 T 12-10-2018 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Gene3D G3DSA:3.40.50.20 1 116 8.1E-49 T 12-10-2018 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1066 13.324 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.0E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.0E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.0E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.0E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.0E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.0E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.0E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 SMART SM01096 420 543 9.7E-61 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 SUPERFAMILY SSF56059 669 930 5.66E-91 T 12-10-2018 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Gene3D G3DSA:3.40.50.20 550 658 2.4E-47 T 12-10-2018 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Gene3D G3DSA:1.10.1030.10 402 549 7.9E-43 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Pfam PF02142 MGS-like domain 954 1040 1.5E-21 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1051 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 SUPERFAMILY SSF52440 1 127 1.12E-48 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 705 719 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 SUPERFAMILY SSF52335 940 1055 3.4E-33 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 SUPERFAMILY SSF52440 553 671 3.45E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Gene3D G3DSA:3.40.50.1380 935 1066 8.3E-40 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Gene3D G3DSA:3.30.470.20 661 932 3.0E-96 T 12-10-2018 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 543 5.5E-37 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 SMART SM00851 953 1040 1.1E-31 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Gene3D G3DSA:3.30.470.20 119 401 6.5E-122 T 12-10-2018 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 SUPERFAMILY SSF48108 395 549 1.2E-44 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 669 868 1.1E-32 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.4E-79 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_4210 24188ec270b0cacf6adbfe7c1ee2e06d 1070 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_2503 fe050745df45d19970ae0a4608a974ce 410 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 7 396 1.6E-146 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Amet_2503 fe050745df45d19970ae0a4608a974ce 410 Pfam PF02601 Exonuclease VII, large subunit 336 393 8.7E-8 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Amet_2503 fe050745df45d19970ae0a4608a974ce 410 Pfam PF02601 Exonuclease VII, large subunit 124 329 3.7E-75 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Amet_2503 fe050745df45d19970ae0a4608a974ce 410 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 3 396 27.545 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Amet_2503 fe050745df45d19970ae0a4608a974ce 410 Pfam PF13742 OB-fold nucleic acid binding domain 6 101 3.2E-29 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Amet_2373 fcf8952ff5ef984910e179af474d6773 364 SUPERFAMILY SSF51419 12 232 4.45E-26 T 12-10-2018 IPR029066 PLP-binding barrel Amet_2373 fcf8952ff5ef984910e179af474d6773 364 Pfam PF01168 Alanine racemase, N-terminal domain 12 228 1.0E-19 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_2373 fcf8952ff5ef984910e179af474d6773 364 Gene3D G3DSA:3.20.20.10 14 227 1.4E-25 T 12-10-2018 IPR029066 PLP-binding barrel Amet_4525 87eba9d76a96415a105ecf6b6718c68f 158 SUPERFAMILY SSF46557 4 78 4.45E-23 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Amet_4525 87eba9d76a96415a105ecf6b6718c68f 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 156 6.3E-55 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Amet_4525 87eba9d76a96415a105ecf6b6718c68f 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.6E-25 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Amet_4525 87eba9d76a96415a105ecf6b6718c68f 158 Gene3D G3DSA:3.10.50.30 82 153 2.0E-25 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Amet_4525 87eba9d76a96415a105ecf6b6718c68f 158 SUPERFAMILY SSF54534 82 156 2.35E-20 T 12-10-2018 Amet_4525 87eba9d76a96415a105ecf6b6718c68f 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 29.398 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Amet_4525 87eba9d76a96415a105ecf6b6718c68f 158 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 2.2E-27 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Amet_4525 87eba9d76a96415a105ecf6b6718c68f 158 PIRSF PIRSF006092 1 158 2.7E-49 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Amet_4525 87eba9d76a96415a105ecf6b6718c68f 158 Gene3D G3DSA:1.10.287.180 3 77 3.5E-27 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Amet_1186 51a93fee090fb8596baeaf0f85037111 246 Gene3D G3DSA:2.30.30.40 40 100 4.5E-8 T 12-10-2018 Amet_1186 51a93fee090fb8596baeaf0f85037111 246 SUPERFAMILY SSF55797 124 243 7.33E-21 T 12-10-2018 IPR035940 CAP superfamily Amet_1186 51a93fee090fb8596baeaf0f85037111 246 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 122 244 1.3E-53 T 12-10-2018 IPR014258 CAP domain, YkwD-like Amet_1186 51a93fee090fb8596baeaf0f85037111 246 Gene3D G3DSA:3.40.33.10 116 246 1.5E-40 T 12-10-2018 IPR035940 CAP superfamily Amet_1186 51a93fee090fb8596baeaf0f85037111 246 Pfam PF00188 Cysteine-rich secretory protein family 128 243 4.1E-16 T 12-10-2018 IPR014044 CAP domain Amet_4672 e86bd9fe6622a9d786383397c2b89168 604 Pfam PF05192 MutS domain III 127 184 2.6E-8 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Amet_4672 e86bd9fe6622a9d786383397c2b89168 604 Pfam PF00488 MutS domain V 427 598 1.7E-28 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_4672 e86bd9fe6622a9d786383397c2b89168 604 SUPERFAMILY SSF48334 128 184 1.44E-10 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Amet_4672 e86bd9fe6622a9d786383397c2b89168 604 PIRSF PIRSF037677 354 601 4.0E-33 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Amet_4672 e86bd9fe6622a9d786383397c2b89168 604 PIRSF PIRSF037677 119 191 1.6E-6 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Amet_4672 e86bd9fe6622a9d786383397c2b89168 604 SUPERFAMILY SSF52540 386 599 4.21E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4672 e86bd9fe6622a9d786383397c2b89168 604 Gene3D G3DSA:3.40.50.300 390 602 8.6E-54 T 12-10-2018 Amet_4672 e86bd9fe6622a9d786383397c2b89168 604 Gene3D G3DSA:1.10.1420.10 118 193 5.7E-10 T 12-10-2018 Amet_4672 e86bd9fe6622a9d786383397c2b89168 604 SMART SM00534 423 602 7.1E-17 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_3994 2cfd987d9085525577e93d50ec74ae2e 262 Gene3D G3DSA:3.40.50.300 1 261 4.9E-72 T 12-10-2018 Amet_3994 2cfd987d9085525577e93d50ec74ae2e 262 SUPERFAMILY SSF52540 1 259 2.47E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3994 2cfd987d9085525577e93d50ec74ae2e 262 Pfam PF13614 AAA domain 3 183 1.9E-57 T 12-10-2018 IPR025669 AAA domain Amet_3994 2cfd987d9085525577e93d50ec74ae2e 262 PIRSF PIRSF009320 101 261 3.1E-8 T 12-10-2018 Amet_3994 2cfd987d9085525577e93d50ec74ae2e 262 PIRSF PIRSF009320 2 74 3.2E-14 T 12-10-2018 Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 12-10-2018 IPR018215 ClpP, Ser active site Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 Pfam PF00574 Clp protease 12 192 2.3E-88 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.722 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 12-10-2018 IPR033135 ClpP, histidine active site Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 3.3E-104 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 SUPERFAMILY SSF52096 10 193 1.66E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 Gene3D G3DSA:3.90.226.10 1 194 6.7E-85 T 12-10-2018 Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 2.2E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 2.2E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 2.2E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 2.2E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_1067 6ef64e0ef05ae0c050e97ba03c1ed969 194 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 2.2E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_2709 db42cebd7f240d04b7d2f4b6e355b232 120 SMART SM00448 3 115 1.1E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2709 db42cebd7f240d04b7d2f4b6e355b232 120 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2709 db42cebd7f240d04b7d2f4b6e355b232 120 SUPERFAMILY SSF52172 4 119 1.35E-39 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2709 db42cebd7f240d04b7d2f4b6e355b232 120 Gene3D G3DSA:3.40.50.2300 2 120 1.2E-39 T 12-10-2018 Amet_1388 00a99406d0bfc1b3757601b5db459fad 227 Gene3D G3DSA:3.20.20.70 2 221 8.7E-38 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1388 00a99406d0bfc1b3757601b5db459fad 227 SMART SM00729 17 216 0.009 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_1388 00a99406d0bfc1b3757601b5db459fad 227 ProSitePatterns PS01087 Radical activating enzymes signature. 15 36 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Amet_1388 00a99406d0bfc1b3757601b5db459fad 227 Pfam PF04055 Radical SAM superfamily 22 154 1.5E-21 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_1388 00a99406d0bfc1b3757601b5db459fad 227 Pfam PF13353 4Fe-4S single cluster domain 19 136 5.2E-12 T 12-10-2018 Amet_1388 00a99406d0bfc1b3757601b5db459fad 227 SUPERFAMILY SSF102114 20 194 2.88E-30 T 12-10-2018 Amet_1388 00a99406d0bfc1b3757601b5db459fad 227 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 3 190 1.1E-65 T 12-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein Amet_2000 a6e4ce6b44afb8ac9e6a475dd5cdf145 139 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 130 2.8E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_2000 a6e4ce6b44afb8ac9e6a475dd5cdf145 139 Gene3D G3DSA:1.10.10.10 72 133 4.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2000 a6e4ce6b44afb8ac9e6a475dd5cdf145 139 Gene3D G3DSA:1.10.1740.10 1 71 5.7E-12 T 12-10-2018 Amet_2000 a6e4ce6b44afb8ac9e6a475dd5cdf145 139 SUPERFAMILY SSF88659 80 133 6.17E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2000 a6e4ce6b44afb8ac9e6a475dd5cdf145 139 Pfam PF04542 Sigma-70 region 2 2 44 8.7E-8 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2000 a6e4ce6b44afb8ac9e6a475dd5cdf145 139 Pfam PF08281 Sigma-70, region 4 76 127 2.3E-14 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2000 a6e4ce6b44afb8ac9e6a475dd5cdf145 139 SUPERFAMILY SSF88946 2 54 5.49E-11 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0727 fb5bce62db3e66af7f9d12bbe3764075 493 Pfam PF00460 Flagella basal body rod protein 8 37 2.0E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Amet_0727 fb5bce62db3e66af7f9d12bbe3764075 493 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 1.1E-9 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Amet_0727 fb5bce62db3e66af7f9d12bbe3764075 493 PRINTS PR01005 Flagellar hook-associated protein signature 162 186 1.1E-9 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Amet_0727 fb5bce62db3e66af7f9d12bbe3764075 493 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 486 6.9E-117 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Amet_0727 fb5bce62db3e66af7f9d12bbe3764075 493 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 430 486 6.9E-13 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Amet_0727 fb5bce62db3e66af7f9d12bbe3764075 493 SUPERFAMILY SSF64518 147 486 1.57E-26 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 Pfam PF00117 Glutamine amidotransferase class-I 8 188 2.9E-43 T 12-10-2018 IPR017926 Glutamine amidotransferase Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 SUPERFAMILY SSF52317 5 198 3.91E-56 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 Gene3D G3DSA:3.30.300.10 391 510 8.0E-51 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 510 54.563 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 PRINTS PR00097 Anthranilate synthase component II signature 77 88 5.3E-5 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 PRINTS PR00097 Anthranilate synthase component II signature 50 59 5.3E-5 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 PRINTS PR00097 Anthranilate synthase component II signature 165 178 5.3E-5 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 193 2.8E-79 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 Pfam PF03054 tRNA methyl transferase 217 248 3.4E-5 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 3.0E-6 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 3.0E-6 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 3.0E-6 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 Pfam PF00958 GMP synthase C terminal domain 418 509 4.8E-42 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 9.1E-7 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 9.1E-7 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 9.1E-7 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 510 5.7E-152 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 Gene3D G3DSA:3.40.50.880 3 197 1.4E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 SUPERFAMILY SSF52402 181 432 1.53E-58 T 12-10-2018 Amet_0910 c7def4b425f0d9f33926063d0180c97a 510 Gene3D G3DSA:3.40.50.620 198 390 6.9E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 Gene3D G3DSA:1.10.287.130 347 431 1.2E-12 T 12-10-2018 Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 578 3.5E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 SMART SM00387 472 584 3.9E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 SMART SM00388 362 432 1.9E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 Gene3D G3DSA:3.30.450.20 156 310 1.5E-9 T 12-10-2018 Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 SUPERFAMILY SSF47384 356 431 1.92E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 Gene3D G3DSA:3.30.565.10 433 585 1.3E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 9.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 9.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 540 9.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 Pfam PF00512 His Kinase A (phospho-acceptor) domain 363 425 5.1E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3228 5bf4b5dfaa5c62733ad83f63a2bdea88 586 SUPERFAMILY SSF55874 432 572 1.7E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1413 8c506716addc178314033498cd4e7b86 154 Gene3D G3DSA:3.40.630.30 8 150 1.4E-17 T 12-10-2018 Amet_1413 8c506716addc178314033498cd4e7b86 154 SUPERFAMILY SSF55729 58 146 5.83E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1413 8c506716addc178314033498cd4e7b86 154 Pfam PF00583 Acetyltransferase (GNAT) family 29 142 7.9E-13 T 12-10-2018 IPR000182 GNAT domain Amet_1880 34dbbfbbe36d8bc325f6bf9011ecfa77 317 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 293 3.0E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_1880 34dbbfbbe36d8bc325f6bf9011ecfa77 317 SUPERFAMILY SSF52540 5 248 2.19E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1880 34dbbfbbe36d8bc325f6bf9011ecfa77 317 Pfam PF00005 ABC transporter 26 177 1.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1880 34dbbfbbe36d8bc325f6bf9011ecfa77 317 Gene3D G3DSA:3.40.50.300 3 317 5.1E-98 T 12-10-2018 Amet_1880 34dbbfbbe36d8bc325f6bf9011ecfa77 317 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 227 312 4.7E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_1880 34dbbfbbe36d8bc325f6bf9011ecfa77 317 SMART SM00382 34 227 4.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3017 cdb41c416275bccfc90a2a4b2781211b 227 SUPERFAMILY SSF158560 12 87 2.09E-15 T 12-10-2018 Amet_1643 8c4208ac18f2156f2f038bb06dd47c34 176 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 85 144 4.1E-9 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 Amet_1643 8c4208ac18f2156f2f038bb06dd47c34 176 SUPERFAMILY SSF46785 24 84 7.8E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1643 8c4208ac18f2156f2f038bb06dd47c34 176 Gene3D G3DSA:1.10.10.10 14 84 5.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1643 8c4208ac18f2156f2f038bb06dd47c34 176 Gene3D G3DSA:1.10.60.10 96 166 5.5E-19 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Amet_1643 8c4208ac18f2156f2f038bb06dd47c34 176 SUPERFAMILY SSF47979 85 148 2.0E-11 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Amet_1643 8c4208ac18f2156f2f038bb06dd47c34 176 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 24 80 4.4E-21 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 Amet_1643 8c4208ac18f2156f2f038bb06dd47c34 176 SMART SM00529 46 143 1.4E-29 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 Amet_4522 cc2165fc01c8721efb70d84f4c192340 169 SUPERFAMILY SSF52833 38 116 3.74E-10 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_4522 cc2165fc01c8721efb70d84f4c192340 169 Gene3D G3DSA:3.40.30.10 1 169 9.6E-54 T 12-10-2018 Amet_4522 cc2165fc01c8721efb70d84f4c192340 169 Pfam PF14595 Thioredoxin 10 134 6.1E-41 T 12-10-2018 Amet_2241 e024b5f26020babd65108c441cc414a7 174 SUPERFAMILY SSF55729 2 169 1.14E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2241 e024b5f26020babd65108c441cc414a7 174 Gene3D G3DSA:3.40.630.30 33 153 2.4E-23 T 12-10-2018 Amet_2241 e024b5f26020babd65108c441cc414a7 174 Pfam PF13302 Acetyltransferase (GNAT) domain 24 153 2.1E-11 T 12-10-2018 IPR000182 GNAT domain Amet_2893 516b053568972d8e97bf41f00c2920d8 390 SUPERFAMILY SSF53800 128 265 3.79E-7 T 12-10-2018 Amet_4555 4b59aeb982d9428802a1e661941ba66e 379 Pfam PF01170 Putative RNA methylase family UPF0020 164 369 9.4E-54 T 12-10-2018 IPR000241 Putative RNA methylase domain Amet_4555 4b59aeb982d9428802a1e661941ba66e 379 SMART SM00981 59 156 1.2E-6 T 12-10-2018 IPR004114 THUMP domain GO:0003723 Amet_4555 4b59aeb982d9428802a1e661941ba66e 379 Gene3D G3DSA:3.30.2130.30 9 247 9.5E-122 T 12-10-2018 Amet_4555 4b59aeb982d9428802a1e661941ba66e 379 SUPERFAMILY SSF53335 142 374 1.31E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_4555 4b59aeb982d9428802a1e661941ba66e 379 Gene3D G3DSA:3.40.50.150 162 368 9.5E-122 T 12-10-2018 Amet_4555 4b59aeb982d9428802a1e661941ba66e 379 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 197 208 - T 12-10-2018 IPR000241 Putative RNA methylase domain Amet_4555 4b59aeb982d9428802a1e661941ba66e 379 Pfam PF02926 THUMP domain 16 155 2.8E-13 T 12-10-2018 IPR004114 THUMP domain GO:0003723 Amet_0330 92d9fa8da9afe7dc78be1266f87db1e2 293 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 288 42.893 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Amet_0330 92d9fa8da9afe7dc78be1266f87db1e2 293 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 284 8.0E-86 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Amet_0330 92d9fa8da9afe7dc78be1266f87db1e2 293 Gene3D G3DSA:1.10.8.10 3 86 1.1E-25 T 12-10-2018 Amet_0330 92d9fa8da9afe7dc78be1266f87db1e2 293 SUPERFAMILY SSF53335 4 286 8.36E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0330 92d9fa8da9afe7dc78be1266f87db1e2 293 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 192 198 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amet_0330 92d9fa8da9afe7dc78be1266f87db1e2 293 Gene3D G3DSA:3.40.50.150 87 291 7.1E-62 T 12-10-2018 Amet_0330 92d9fa8da9afe7dc78be1266f87db1e2 293 Pfam PF05175 Methyltransferase small domain 116 198 2.3E-11 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Amet_0330 92d9fa8da9afe7dc78be1266f87db1e2 293 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 288 6.4E-72 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Amet_4097 bcbba96fa31f221680bda593bc824d9d 165 Gene3D G3DSA:1.20.1260.10 2 154 2.7E-26 T 12-10-2018 IPR012347 Ferritin-like Amet_4097 bcbba96fa31f221680bda593bc824d9d 165 Pfam PF02915 Rubrerythrin 6 151 1.8E-16 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Amet_4097 bcbba96fa31f221680bda593bc824d9d 165 SUPERFAMILY SSF47240 3 157 3.36E-25 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_0914 3f4d93d3279505e2f63f2c0a9b4bad55 224 Gene3D G3DSA:1.10.150.320 147 218 4.2E-13 T 12-10-2018 Amet_0914 3f4d93d3279505e2f63f2c0a9b4bad55 224 Pfam PF07833 Copper amine oxidase N-terminal domain 27 70 1.3E-8 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_0914 3f4d93d3279505e2f63f2c0a9b4bad55 224 Pfam PF07833 Copper amine oxidase N-terminal domain 49 140 1.2E-33 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_0914 3f4d93d3279505e2f63f2c0a9b4bad55 224 SUPERFAMILY SSF55383 51 135 1.44E-28 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_0914 3f4d93d3279505e2f63f2c0a9b4bad55 224 Gene3D G3DSA:3.30.457.10 53 126 3.0E-30 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_0914 3f4d93d3279505e2f63f2c0a9b4bad55 224 SUPERFAMILY SSF47781 147 216 4.89E-12 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_0914 3f4d93d3279505e2f63f2c0a9b4bad55 224 Pfam PF12836 Helix-hairpin-helix motif 164 212 5.9E-11 T 12-10-2018 Amet_0351 00f74d56856dea45bab838c2313342ea 505 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 501 52.185 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0351 00f74d56856dea45bab838c2313342ea 505 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 496 3.5E-49 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0351 00f74d56856dea45bab838c2313342ea 505 SUPERFAMILY SSF47917 372 500 5.49E-47 T 12-10-2018 Amet_0351 00f74d56856dea45bab838c2313342ea 505 Gene3D G3DSA:1.20.150.20 372 502 1.3E-50 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0351 00f74d56856dea45bab838c2313342ea 505 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 1.6E-74 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_0351 00f74d56856dea45bab838c2313342ea 505 Gene3D G3DSA:2.40.30.20 1 93 2.1E-39 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_0351 00f74d56856dea45bab838c2313342ea 505 SUPERFAMILY SSF50615 10 94 3.73E-30 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_0351 00f74d56856dea45bab838c2313342ea 505 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 6.4E-19 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_0351 00f74d56856dea45bab838c2313342ea 505 SUPERFAMILY SSF52540 96 370 1.96E-102 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0351 00f74d56856dea45bab838c2313342ea 505 Gene3D G3DSA:3.40.50.300 94 371 9.8E-130 T 12-10-2018 Amet_0351 00f74d56856dea45bab838c2313342ea 505 PIRSF PIRSF039088 1 503 3.9E-271 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0351 00f74d56856dea45bab838c2313342ea 505 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 501 1.1E-257 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0351 00f74d56856dea45bab838c2313342ea 505 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_4588 ed75cc0949e961ff29cc5b137384d121 551 Pfam PF13556 PucR C-terminal helix-turn-helix domain 487 545 2.3E-20 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amet_4588 ed75cc0949e961ff29cc5b137384d121 551 Gene3D G3DSA:1.10.10.2840 417 550 1.3E-21 T 12-10-2018 Amet_4588 ed75cc0949e961ff29cc5b137384d121 551 Pfam PF07905 Purine catabolism regulatory protein-like family 11 131 4.5E-31 T 12-10-2018 IPR012914 Purine catabolism PurC-like domain Amet_3572 c198370e592141aa5485bb74f3c50652 706 Hamap MF_01895 Ribonuclease R [rnr]. 21 704 58.311 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Amet_3572 c198370e592141aa5485bb74f3c50652 706 Gene3D G3DSA:2.40.50.140 52 130 6.8E-16 T 12-10-2018 Amet_3572 c198370e592141aa5485bb74f3c50652 706 Gene3D G3DSA:2.40.50.140 131 200 6.6E-10 T 12-10-2018 Amet_3572 c198370e592141aa5485bb74f3c50652 706 Pfam PF00773 RNB domain 245 574 1.5E-117 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Amet_3572 c198370e592141aa5485bb74f3c50652 706 SUPERFAMILY SSF50249 206 621 9.71E-146 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_3572 c198370e592141aa5485bb74f3c50652 706 SUPERFAMILY SSF50249 123 222 8.29E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_3572 c198370e592141aa5485bb74f3c50652 706 SMART SM00316 622 704 1.7E-15 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_3572 c198370e592141aa5485bb74f3c50652 706 SMART SM00357 69 130 1.6E-6 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Amet_3572 c198370e592141aa5485bb74f3c50652 706 SMART SM00357 135 199 0.0018 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Amet_3572 c198370e592141aa5485bb74f3c50652 706 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 57 704 1.8E-219 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Amet_3572 c198370e592141aa5485bb74f3c50652 706 TIGRFAM TIGR02063 RNase_R: ribonuclease R 3 704 6.4E-269 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Amet_3572 c198370e592141aa5485bb74f3c50652 706 ProSitePatterns PS01175 Ribonuclease II family signature. 542 566 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site Amet_3572 c198370e592141aa5485bb74f3c50652 706 SMART SM00955 245 575 2.1E-176 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Amet_3572 c198370e592141aa5485bb74f3c50652 706 Pfam PF08206 Ribonuclease B OB domain 145 198 6.6E-9 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Amet_3572 c198370e592141aa5485bb74f3c50652 706 Pfam PF08206 Ribonuclease B OB domain 70 129 2.7E-17 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Amet_3572 c198370e592141aa5485bb74f3c50652 706 SUPERFAMILY SSF50249 51 130 7.03E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_3572 c198370e592141aa5485bb74f3c50652 706 Pfam PF00575 S1 RNA binding domain 623 702 1.5E-13 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_3572 c198370e592141aa5485bb74f3c50652 706 Gene3D G3DSA:2.40.50.140 625 706 7.9E-21 T 12-10-2018 Amet_3572 c198370e592141aa5485bb74f3c50652 706 SUPERFAMILY SSF50249 624 703 1.1E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 Pfam PF00890 FAD binding domain 147 200 2.7E-13 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 Pfam PF00890 FAD binding domain 251 634 1.9E-54 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 Gene3D G3DSA:3.50.50.60 135 227 1.6E-20 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 169 1.3E-7 T 12-10-2018 Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 493 500 1.3E-7 T 12-10-2018 Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 SUPERFAMILY SSF56425 461 595 3.44E-30 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 Gene3D G3DSA:3.50.50.60 251 649 3.0E-105 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 Pfam PF04205 FMN-binding domain 51 119 3.2E-13 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 SUPERFAMILY SSF51905 136 651 2.1E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 268 646 2.2E-88 T 12-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 Gene3D G3DSA:3.90.700.10 437 591 3.0E-105 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 Gene3D G3DSA:3.90.1010.20 74 134 7.9E-5 T 12-10-2018 Amet_1551 28d793f4f0643c0ac38b9d69a7c6a15a 653 SMART SM00900 48 122 1.9E-15 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 PIRSF PIRSF000106 16 390 3.2E-85 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 Gene3D G3DSA:3.40.50.720 158 390 1.0E-83 T 12-10-2018 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 SMART SM01274 15 148 3.0E-89 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 SUPERFAMILY SSF53223 8 158 1.58E-59 T 12-10-2018 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 PRINTS PR00072 Malic enzyme signature 156 172 1.1E-8 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 PRINTS PR00072 Malic enzyme signature 77 99 1.1E-8 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 PRINTS PR00072 Malic enzyme signature 187 203 1.1E-8 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 Gene3D G3DSA:3.40.50.10380 1 157 1.1E-77 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 Pfam PF00390 Malic enzyme, N-terminal domain 18 148 3.4E-33 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 SUPERFAMILY SSF51735 160 389 1.86E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 SMART SM00919 160 383 1.7E-124 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amet_1304 bbc242ceee2db1b92cb66345efecd983 390 Pfam PF03949 Malic enzyme, NAD binding domain 162 382 9.6E-24 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amet_2962 51f5458016f37de03a175f12aadfa2be 167 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 7 160 6.0E-58 T 12-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Amet_2962 51f5458016f37de03a175f12aadfa2be 167 Pfam PF00694 Aconitase C-terminal domain 44 102 1.6E-19 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Amet_2962 51f5458016f37de03a175f12aadfa2be 167 SUPERFAMILY SSF52016 3 163 1.96E-47 T 12-10-2018 Amet_2962 51f5458016f37de03a175f12aadfa2be 167 Gene3D G3DSA:3.20.19.10 1 167 1.6E-59 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Amet_2962 51f5458016f37de03a175f12aadfa2be 167 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 5 165 35.671 T 12-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Amet_2687 bcc100c59cd1a2d285a79bff5a048440 236 Gene3D G3DSA:3.40.1160.10 3 236 6.4E-81 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_2687 bcc100c59cd1a2d285a79bff5a048440 236 PIRSF PIRSF005650 2 236 2.2E-96 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Amet_2687 bcc100c59cd1a2d285a79bff5a048440 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 235 44.447 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Amet_2687 bcc100c59cd1a2d285a79bff5a048440 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 234 3.2E-99 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Amet_2687 bcc100c59cd1a2d285a79bff5a048440 236 Pfam PF00696 Amino acid kinase family 7 213 1.2E-30 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amet_2687 bcc100c59cd1a2d285a79bff5a048440 236 SUPERFAMILY SSF53633 4 235 6.81E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_4752 e9f0b4de51ff18c6f9a1673e7203c14b 264 SMART SM00849 13 191 5.1E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_4752 e9f0b4de51ff18c6f9a1673e7203c14b 264 Pfam PF12706 Beta-lactamase superfamily domain 26 208 6.0E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_4752 e9f0b4de51ff18c6f9a1673e7203c14b 264 Gene3D G3DSA:3.60.15.10 3 250 3.9E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_4752 e9f0b4de51ff18c6f9a1673e7203c14b 264 SUPERFAMILY SSF56281 1 227 1.26E-44 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_0443 e32283a53333a1bb56ca60b173774132 329 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 202 284 1.3E-32 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Amet_0443 e32283a53333a1bb56ca60b173774132 329 SMART SM00893 6 193 9.6E-44 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0443 e32283a53333a1bb56ca60b173774132 329 Pfam PF01012 Electron transfer flavoprotein domain 6 179 2.5E-39 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0443 e32283a53333a1bb56ca60b173774132 329 Gene3D G3DSA:3.40.50.620 1 195 1.3E-56 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_0443 e32283a53333a1bb56ca60b173774132 329 SUPERFAMILY SSF52467 201 321 9.0E-46 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amet_0443 e32283a53333a1bb56ca60b173774132 329 PIRSF PIRSF000089 2 326 4.9E-102 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Amet_0443 e32283a53333a1bb56ca60b173774132 329 SUPERFAMILY SSF52402 4 181 2.79E-43 T 12-10-2018 Amet_0443 e32283a53333a1bb56ca60b173774132 329 Gene3D G3DSA:3.40.50.1220 196 328 3.3E-53 T 12-10-2018 Amet_4293 2ee693237f8a6bd7e8d6f0c87dc3e9f0 154 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 15 152 3.3E-19 T 12-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Amet_4293 2ee693237f8a6bd7e8d6f0c87dc3e9f0 154 Gene3D G3DSA:2.30.110.10 2 153 4.8E-42 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amet_4293 2ee693237f8a6bd7e8d6f0c87dc3e9f0 154 SUPERFAMILY SSF50475 1 153 8.02E-49 T 12-10-2018 Amet_3637 04a373212b55baa15aed7d92ebe4146e 179 Gene3D G3DSA:2.10.109.10 36 168 7.7E-31 T 12-10-2018 Amet_3637 04a373212b55baa15aed7d92ebe4146e 179 Pfam PF00717 Peptidase S24-like 35 105 2.4E-13 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amet_3637 04a373212b55baa15aed7d92ebe4146e 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 130 149 8.0E-14 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3637 04a373212b55baa15aed7d92ebe4146e 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 82 94 8.0E-14 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3637 04a373212b55baa15aed7d92ebe4146e 179 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 8.0E-14 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3637 04a373212b55baa15aed7d92ebe4146e 179 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 11 171 1.4E-47 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3637 04a373212b55baa15aed7d92ebe4146e 179 SUPERFAMILY SSF51306 27 176 5.93E-43 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amet_3637 04a373212b55baa15aed7d92ebe4146e 179 ProSitePatterns PS00501 Signal peptidases I serine active site. 37 44 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Amet_3637 04a373212b55baa15aed7d92ebe4146e 179 ProSitePatterns PS00761 Signal peptidases I signature 3. 135 148 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Amet_4309 ee4035ae075509f81b95e3e142f8a61b 302 PIRSF PIRSF000428 1 301 6.6E-87 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Amet_4309 ee4035ae075509f81b95e3e142f8a61b 302 Gene3D G3DSA:3.40.718.10 3 300 1.2E-105 T 12-10-2018 Amet_4309 ee4035ae075509f81b95e3e142f8a61b 302 Pfam PF01515 Phosphate acetyl/butaryl transferase 77 293 7.1E-47 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Amet_4309 ee4035ae075509f81b95e3e142f8a61b 302 SUPERFAMILY SSF53659 5 299 1.52E-63 T 12-10-2018 Amet_4309 ee4035ae075509f81b95e3e142f8a61b 302 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 5 297 1.4E-126 T 12-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 Amet_0544 9932be06598ab035c7f787466d06c5a7 282 Pfam PF12833 Helix-turn-helix domain 201 278 1.5E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_0544 9932be06598ab035c7f787466d06c5a7 282 Pfam PF02311 AraC-like ligand binding domain 30 155 1.8E-12 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Amet_0544 9932be06598ab035c7f787466d06c5a7 282 Gene3D G3DSA:2.60.120.10 18 94 2.7E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_0544 9932be06598ab035c7f787466d06c5a7 282 Gene3D G3DSA:1.10.10.60 228 281 2.0E-18 T 12-10-2018 Amet_0544 9932be06598ab035c7f787466d06c5a7 282 SUPERFAMILY SSF46689 230 278 3.32E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0544 9932be06598ab035c7f787466d06c5a7 282 Gene3D G3DSA:1.10.10.60 176 227 1.2E-18 T 12-10-2018 Amet_0544 9932be06598ab035c7f787466d06c5a7 282 SMART SM00342 194 277 8.1E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_0544 9932be06598ab035c7f787466d06c5a7 282 SUPERFAMILY SSF51215 17 158 1.44E-14 T 12-10-2018 IPR037923 Transcription regulator HTH-like Amet_0544 9932be06598ab035c7f787466d06c5a7 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_0544 9932be06598ab035c7f787466d06c5a7 282 SUPERFAMILY SSF46689 177 228 3.94E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 SUPERFAMILY SSF55816 1754 1938 1.9E-17 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 Gene3D G3DSA:2.160.20.110 766 919 1.5E-18 T 12-10-2018 Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 Gene3D G3DSA:2.160.20.110 1344 1485 4.0E-14 T 12-10-2018 Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 Gene3D G3DSA:2.160.20.110 1099 1292 2.5E-27 T 12-10-2018 Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 Gene3D G3DSA:2.160.20.110 514 723 2.7E-25 T 12-10-2018 Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 Gene3D G3DSA:3.90.780.10 1756 1945 1.4E-12 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 Pfam PF02872 5'-nucleotidase, C-terminal domain 1755 1897 1.0E-12 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 Pfam PF00395 S-layer homology domain 34 74 2.8E-13 T 12-10-2018 IPR001119 S-layer homology domain Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 Pfam PF00395 S-layer homology domain 91 132 9.6E-13 T 12-10-2018 IPR001119 S-layer homology domain Amet_0963 02cdb947ae42f41fbd47d3103d99ac85 1948 Pfam PF00395 S-layer homology domain 150 193 1.6E-11 T 12-10-2018 IPR001119 S-layer homology domain Amet_1827 fe1cfd952a1f2136d6697e4316d52386 121 Gene3D G3DSA:1.10.10.10 1 92 2.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1827 fe1cfd952a1f2136d6697e4316d52386 121 Pfam PF01022 Bacterial regulatory protein, arsR family 10 56 3.5E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1827 fe1cfd952a1f2136d6697e4316d52386 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 4.4E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1827 fe1cfd952a1f2136d6697e4316d52386 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 4.4E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1827 fe1cfd952a1f2136d6697e4316d52386 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 4.4E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1827 fe1cfd952a1f2136d6697e4316d52386 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 35 4.4E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1827 fe1cfd952a1f2136d6697e4316d52386 121 SMART SM00418 3 77 2.5E-26 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1827 fe1cfd952a1f2136d6697e4316d52386 121 SUPERFAMILY SSF46785 1 88 2.81E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2696 672262227f9164f923f8657d7d0752e2 205 Gene3D G3DSA:3.40.1550.10 7 205 2.4E-60 T 12-10-2018 IPR028976 CheC-like superfamily Amet_2696 672262227f9164f923f8657d7d0752e2 205 Pfam PF04509 CheC-like family 11 47 8.7E-12 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 Amet_2696 672262227f9164f923f8657d7d0752e2 205 Pfam PF04509 CheC-like family 109 145 1.4E-7 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 Amet_2696 672262227f9164f923f8657d7d0752e2 205 SUPERFAMILY SSF103039 7 203 2.79E-53 T 12-10-2018 IPR028976 CheC-like superfamily Amet_4693 54765e972d3f092db166490666c0ff18 188 Gene3D G3DSA:1.10.10.10 104 182 1.0E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4693 54765e972d3f092db166490666c0ff18 188 Pfam PF04542 Sigma-70 region 2 24 91 2.1E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4693 54765e972d3f092db166490666c0ff18 188 Pfam PF08281 Sigma-70, region 4 122 174 1.3E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_4693 54765e972d3f092db166490666c0ff18 188 SUPERFAMILY SSF88659 113 178 1.27E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_4693 54765e972d3f092db166490666c0ff18 188 Gene3D G3DSA:1.10.1740.10 7 103 3.7E-15 T 12-10-2018 Amet_4693 54765e972d3f092db166490666c0ff18 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 176 1.1E-29 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_4693 54765e972d3f092db166490666c0ff18 188 SUPERFAMILY SSF88946 13 103 2.9E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 299 1.4E-127 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.3E-81 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.3E-81 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.3E-81 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.3E-81 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.3E-81 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.3E-81 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 1.3E-81 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.3E-81 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.3E-81 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 Gene3D G3DSA:3.40.50.450 4 278 1.8E-110 T 12-10-2018 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 Pfam PF00365 Phosphofructokinase 4 275 8.9E-107 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 PIRSF PIRSF000532 1 318 1.5E-118 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 Gene3D G3DSA:3.40.50.460 142 251 1.8E-110 T 12-10-2018 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 SUPERFAMILY SSF53784 1 315 1.15E-114 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Amet_4069 c207df7d1cac2923df7040e8d9d89038 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 45.826 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Amet_3124 dd4a70c45e312758eeae10d3b175cb3c 200 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 193 5.0E-61 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Amet_3124 dd4a70c45e312758eeae10d3b175cb3c 200 Pfam PF01121 Dephospho-CoA kinase 6 186 1.6E-56 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Amet_3124 dd4a70c45e312758eeae10d3b175cb3c 200 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 198 26.441 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Amet_3124 dd4a70c45e312758eeae10d3b175cb3c 200 SUPERFAMILY SSF52540 3 198 1.99E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3124 dd4a70c45e312758eeae10d3b175cb3c 200 Gene3D G3DSA:3.40.50.300 1 200 7.5E-74 T 12-10-2018 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 400 9.6E-22 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 Gene3D G3DSA:3.90.190.20 315 460 1.4E-57 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 11 460 39.01 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 Gene3D G3DSA:3.40.1190.10 100 314 1.3E-69 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 13 456 5.6E-146 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 Pfam PF01225 Mur ligase family, catalytic domain 13 111 5.6E-26 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 SUPERFAMILY SSF53244 316 457 4.21E-46 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 SUPERFAMILY SSF51984 12 97 3.53E-28 T 12-10-2018 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 Gene3D G3DSA:3.40.50.720 13 99 7.5E-33 T 12-10-2018 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 Pfam PF08245 Mur ligase middle domain 117 296 6.5E-33 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amet_0153 6807d09b3c692ecedfdb3c47de4b32c8 460 SUPERFAMILY SSF53623 98 315 3.4E-60 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 Gene3D G3DSA:2.40.50.180 34 150 1.9E-31 T 12-10-2018 Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 Pfam PF00072 Response regulator receiver domain 177 298 8.0E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 SMART SM00448 175 298 1.9E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 SMART SM00260 13 150 2.2E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 Pfam PF01584 CheW-like domain 18 150 4.1E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 Gene3D G3DSA:3.40.50.2300 171 310 2.4E-28 T 12-10-2018 Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 SUPERFAMILY SSF50341 7 152 1.23E-31 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 Gene3D G3DSA:2.30.30.40 19 144 1.9E-31 T 12-10-2018 Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 PIRSF PIRSF002867 1 306 2.7E-94 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV Amet_2732 eca6e9ef62d24fb207c1e868011a69b5 317 SUPERFAMILY SSF52172 172 300 1.22E-25 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0570 a218ef783b4af455ee80f6320f685967 396 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 13 325 2.0E-96 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Amet_0570 a218ef783b4af455ee80f6320f685967 396 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 18 380 29.361 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Amet_0570 a218ef783b4af455ee80f6320f685967 396 SUPERFAMILY SSF55681 8 324 7.37E-62 T 12-10-2018 Amet_0570 a218ef783b4af455ee80f6320f685967 396 PIRSF PIRSF001549 4 396 4.5E-79 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Amet_0570 a218ef783b4af455ee80f6320f685967 396 Pfam PF13393 Histidyl-tRNA synthetase 11 321 1.5E-73 T 12-10-2018 Amet_0570 a218ef783b4af455ee80f6320f685967 396 Gene3D G3DSA:3.30.930.10 4 326 2.6E-87 T 12-10-2018 Amet_3223 8a291e9ae70db02811801f7b3d1bb5f7 517 SUPERFAMILY SSF100950 250 516 2.46E-59 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_3223 8a291e9ae70db02811801f7b3d1bb5f7 517 PIRSF PIRSF009451 4 517 9.1E-235 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Amet_3223 8a291e9ae70db02811801f7b3d1bb5f7 517 Gene3D G3DSA:3.40.1080.10 4 251 3.2E-101 T 12-10-2018 Amet_3223 8a291e9ae70db02811801f7b3d1bb5f7 517 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 51 516 1.1E-201 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Amet_3223 8a291e9ae70db02811801f7b3d1bb5f7 517 SUPERFAMILY SSF100950 7 248 2.32E-71 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_3223 8a291e9ae70db02811801f7b3d1bb5f7 517 Gene3D G3DSA:3.40.1080.10 252 517 1.2E-124 T 12-10-2018 Amet_3223 8a291e9ae70db02811801f7b3d1bb5f7 517 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 28 517 7.2E-217 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Amet_1153 e851c379f8186cf1a8c40beaf261fd6f 198 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 4 191 4.6E-44 T 12-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Amet_1153 e851c379f8186cf1a8c40beaf261fd6f 198 Gene3D G3DSA:3.40.50.11310 2 194 2.1E-53 T 12-10-2018 IPR038058 PhnH-like superfamily Amet_1153 e851c379f8186cf1a8c40beaf261fd6f 198 SUPERFAMILY SSF159709 7 193 1.31E-40 T 12-10-2018 IPR038058 PhnH-like superfamily Amet_1153 e851c379f8186cf1a8c40beaf261fd6f 198 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 4 192 5.2E-48 T 12-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Amet_1153 e851c379f8186cf1a8c40beaf261fd6f 198 PIRSF PIRSF020680 1 198 1.4E-55 T 12-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 Amet_3253 f4b5ab36cc5609806880f255b2197c3a 376 Pfam PF07907 YibE/F-like protein 120 360 1.7E-81 T 12-10-2018 IPR012507 YibE/F-like Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 SUPERFAMILY SSF52540 256 493 2.38E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 Pfam PF00005 ABC transporter 21 170 4.9E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 Gene3D G3DSA:3.40.50.300 2 240 1.2E-56 T 12-10-2018 Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 Gene3D G3DSA:3.40.50.300 253 498 9.0E-37 T 12-10-2018 Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 SUPERFAMILY SSF52540 4 226 4.21E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 SMART SM00382 29 218 8.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 SMART SM00382 283 480 5.9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 Pfam PF00005 ABC transporter 275 431 5.7E-14 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3585 adeb11dc0640d52e8b343c6fa65afe08 511 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1292 869ab064a08fe2fc8cdb6b5fcfbc64ea 355 PIRSF PIRSF016049 1 355 2.9E-129 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Amet_1292 869ab064a08fe2fc8cdb6b5fcfbc64ea 355 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 355 153.005 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Amet_1292 869ab064a08fe2fc8cdb6b5fcfbc64ea 355 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 2 354 1.0E-106 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Amet_1292 869ab064a08fe2fc8cdb6b5fcfbc64ea 355 Gene3D G3DSA:3.20.20.150 1 355 1.2E-140 T 12-10-2018 Amet_1292 869ab064a08fe2fc8cdb6b5fcfbc64ea 355 SUPERFAMILY SSF51658 2 352 2.8E-80 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Amet_1292 869ab064a08fe2fc8cdb6b5fcfbc64ea 355 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 352 1.5E-142 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Amet_3336 03926595acd7a764a247278b596b0b8d 518 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3336 03926595acd7a764a247278b596b0b8d 518 SMART SM00382 28 236 6.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3336 03926595acd7a764a247278b596b0b8d 518 SMART SM00382 349 518 2.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3336 03926595acd7a764a247278b596b0b8d 518 Pfam PF00005 ABC transporter 341 469 3.0E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3336 03926595acd7a764a247278b596b0b8d 518 SUPERFAMILY SSF52540 4 243 3.38E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3336 03926595acd7a764a247278b596b0b8d 518 Pfam PF00005 ABC transporter 20 191 4.8E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3336 03926595acd7a764a247278b596b0b8d 518 Gene3D G3DSA:3.40.50.300 289 515 2.3E-45 T 12-10-2018 Amet_3336 03926595acd7a764a247278b596b0b8d 518 SUPERFAMILY SSF52540 309 508 4.67E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3336 03926595acd7a764a247278b596b0b8d 518 Gene3D G3DSA:3.40.50.300 3 285 4.6E-65 T 12-10-2018 Amet_3336 03926595acd7a764a247278b596b0b8d 518 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3336 03926595acd7a764a247278b596b0b8d 518 Pfam PF12848 ABC transporter 230 315 5.8E-19 T 12-10-2018 IPR032781 ABC-transporter extension domain Amet_1133 33f74108d83310ca72b37527ee51716d 273 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 3 44 5.2E-5 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amet_1133 33f74108d83310ca72b37527ee51716d 273 SUPERFAMILY SSF161098 67 254 6.02E-22 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1133 33f74108d83310ca72b37527ee51716d 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 271 3.8E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1133 33f74108d83310ca72b37527ee51716d 273 Gene3D G3DSA:1.10.3720.10 62 269 2.7E-18 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1914 32983016d9bb033c77aab4652011380e 868 SUPERFAMILY SSF56059 2 317 1.65E-92 T 12-10-2018 Amet_1914 32983016d9bb033c77aab4652011380e 868 Pfam PF00391 PEP-utilising enzyme, mobile domain 785 856 1.0E-21 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Amet_1914 32983016d9bb033c77aab4652011380e 868 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 311 2.0E-101 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Amet_1914 32983016d9bb033c77aab4652011380e 868 SUPERFAMILY SSF52009 759 861 5.23E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Amet_1914 32983016d9bb033c77aab4652011380e 868 Gene3D G3DSA:3.30.470.20 183 323 1.2E-42 T 12-10-2018 Amet_1914 32983016d9bb033c77aab4652011380e 868 Gene3D G3DSA:3.30.1490.20 1 181 5.6E-62 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_1914 32983016d9bb033c77aab4652011380e 868 Gene3D G3DSA:3.50.30.10 760 864 9.4E-30 T 12-10-2018 Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 Gene3D G3DSA:2.60.120.10 4 151 1.9E-36 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 SUPERFAMILY SSF51206 15 151 6.55E-35 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 SMART SM00100 19 137 3.2E-21 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 SUPERFAMILY SSF46785 154 233 4.82E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 SMART SM00419 176 225 1.5E-12 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 Pfam PF13545 Crp-like helix-turn-helix domain 157 232 2.7E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 Pfam PF00027 Cyclic nucleotide-binding domain 38 122 1.1E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 Gene3D G3DSA:1.10.10.10 153 233 2.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 213 2.1E-8 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_3722 d39a36a3bf1375ccedd4f0248d197e22 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 198 2.1E-8 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_1841 ff791835600d469665f478ceb4617628 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.5E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1841 ff791835600d469665f478ceb4617628 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.5E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1841 ff791835600d469665f478ceb4617628 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.5E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1841 ff791835600d469665f478ceb4617628 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.5E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1841 ff791835600d469665f478ceb4617628 114 SUPERFAMILY SSF46785 1 111 2.73E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1841 ff791835600d469665f478ceb4617628 114 Pfam PF01022 Bacterial regulatory protein, arsR family 13 57 3.9E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1841 ff791835600d469665f478ceb4617628 114 SMART SM00418 6 82 1.1E-25 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1841 ff791835600d469665f478ceb4617628 114 Gene3D G3DSA:1.10.10.10 1 95 1.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2528 659a028e71b8696642498407ae50a8ef 387 Gene3D G3DSA:2.60.410.10 280 370 2.7E-18 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2528 659a028e71b8696642498407ae50a8ef 387 Gene3D G3DSA:3.40.710.10 17 279 1.5E-86 T 12-10-2018 Amet_2528 659a028e71b8696642498407ae50a8ef 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 2.7E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_2528 659a028e71b8696642498407ae50a8ef 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 2.7E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_2528 659a028e71b8696642498407ae50a8ef 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 2.7E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_2528 659a028e71b8696642498407ae50a8ef 387 SUPERFAMILY SSF56601 4 280 6.84E-79 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_2528 659a028e71b8696642498407ae50a8ef 387 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 260 3.1E-71 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Amet_2528 659a028e71b8696642498407ae50a8ef 387 SUPERFAMILY SSF69189 280 372 9.61E-17 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2528 659a028e71b8696642498407ae50a8ef 387 SMART SM00936 280 370 7.0E-21 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2528 659a028e71b8696642498407ae50a8ef 387 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 1.6E-14 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 Pfam PF02954 Bacterial regulatory protein, Fis family 405 445 5.0E-16 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 SUPERFAMILY SSF46689 354 447 1.16E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 Gene3D G3DSA:3.40.50.2300 1 121 3.7E-43 T 12-10-2018 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 Gene3D G3DSA:3.40.50.300 126 311 2.1E-69 T 12-10-2018 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 SMART SM00382 161 304 6.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 Pfam PF00158 Sigma-54 interaction domain 141 308 1.1E-73 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 Gene3D G3DSA:1.10.8.60 312 378 2.8E-25 T 12-10-2018 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 Pfam PF00072 Response regulator receiver domain 4 111 1.1E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 SUPERFAMILY SSF52172 2 185 7.12E-51 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 SUPERFAMILY SSF52540 141 384 2.2E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 3.4E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 3.4E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 SMART SM00448 2 113 2.0E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3255 11526f2087b08b5f213c21d84ac2bcfb 449 Gene3D G3DSA:1.10.10.60 379 449 1.2E-17 T 12-10-2018 Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 SUPERFAMILY SSF52980 988 1191 6.97E-34 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 3 1195 0.0 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 1 1197 19.307 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 Gene3D G3DSA:3.40.50.300 1 178 4.9E-38 T 12-10-2018 Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1023 1188 1.4E-8 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 SUPERFAMILY SSF52540 2 862 1.54E-113 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 438 7.3E-78 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 Gene3D G3DSA:3.90.320.10 965 1196 3.2E-74 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 Gene3D G3DSA:3.40.50.300 212 442 1.0E-30 T 12-10-2018 Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 Gene3D G3DSA:3.40.50.300 736 931 3.2E-41 T 12-10-2018 Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 Gene3D G3DSA:3.40.50.300 452 735 3.9E-48 T 12-10-2018 Amet_4169 01f5eda00aedd78f89476828e6e7484b 1197 Pfam PF13361 UvrD-like helicase C-terminal domain 449 857 2.0E-26 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amet_1237 85741ad14e996d5a7e6602768394af3e 219 SUPERFAMILY SSF64005 2 213 3.14E-48 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Amet_1237 85741ad14e996d5a7e6602768394af3e 219 Pfam PF01255 Putative undecaprenyl diphosphate synthase 11 215 4.2E-43 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amet_1237 85741ad14e996d5a7e6602768394af3e 219 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 4 214 1.5E-36 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Amet_1237 85741ad14e996d5a7e6602768394af3e 219 Gene3D G3DSA:3.40.1180.10 1 219 5.3E-49 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Amet_4204 586f7533d35da482977eb666f84bf4eb 369 Pfam PF12698 ABC-2 family transporter protein 15 360 7.9E-35 T 12-10-2018 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 443 3.9E-15 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 367 2.5E-34 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 Gene3D G3DSA:3.40.120.10 256 339 8.7E-70 T 12-10-2018 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 SUPERFAMILY SSF53738 257 363 4.71E-32 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 2.4E-172 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 253 9.5E-19 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 Gene3D G3DSA:3.30.310.50 370 448 3.6E-24 T 12-10-2018 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 SUPERFAMILY SSF55957 357 447 6.67E-21 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 Gene3D G3DSA:3.40.120.10 173 362 8.7E-70 T 12-10-2018 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 4.2E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 4.2E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 4.2E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 SUPERFAMILY SSF53738 3 179 4.71E-48 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 Gene3D G3DSA:3.40.120.10 3 155 1.1E-53 T 12-10-2018 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 2.2E-45 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 SUPERFAMILY SSF53738 158 255 1.33E-25 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_4300 f25fa2681f5b1171c6d66b65e783238d 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 44.24 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Amet_2094 1f0ccf9732f8ade36780ed66c3a58e5a 454 Pfam PF13347 MFS/sugar transport protein 13 436 1.2E-117 T 12-10-2018 Amet_2094 1f0ccf9732f8ade36780ed66c3a58e5a 454 Gene3D G3DSA:1.20.1250.20 226 441 1.4E-8 T 12-10-2018 Amet_2094 1f0ccf9732f8ade36780ed66c3a58e5a 454 Gene3D G3DSA:1.20.1250.20 11 207 1.9E-6 T 12-10-2018 Amet_2094 1f0ccf9732f8ade36780ed66c3a58e5a 454 SUPERFAMILY SSF103473 7 433 2.44E-25 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_2094 1f0ccf9732f8ade36780ed66c3a58e5a 454 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 13 441 1.6E-74 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 Amet_1468 388df7530f81d9b47e20ab949b09d45a 156 Gene3D G3DSA:3.40.50.1000 9 151 9.6E-11 T 12-10-2018 IPR023214 HAD superfamily Amet_1468 388df7530f81d9b47e20ab949b09d45a 156 SUPERFAMILY SSF56784 14 137 6.04E-13 T 12-10-2018 IPR036412 HAD-like superfamily Amet_4110 65720a7d9a99b36325b538091fe6f068 160 Gene3D G3DSA:3.40.30.10 75 157 3.4E-25 T 12-10-2018 Amet_4110 65720a7d9a99b36325b538091fe6f068 160 PIRSF PIRSF000216 2 160 2.0E-50 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4110 65720a7d9a99b36325b538091fe6f068 160 Gene3D G3DSA:1.10.10.1590 4 74 6.7E-15 T 12-10-2018 Amet_4110 65720a7d9a99b36325b538091fe6f068 160 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 15 158 2.5E-46 T 12-10-2018 Amet_4110 65720a7d9a99b36325b538091fe6f068 160 SUPERFAMILY SSF52833 6 157 2.01E-48 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_4234 252bfc8ea0d29f176dfefca00d6bc830 367 SMART SM00876 256 359 1.3E-33 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_4234 252bfc8ea0d29f176dfefca00d6bc830 367 Gene3D G3DSA:3.20.20.70 14 364 4.3E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_4234 252bfc8ea0d29f176dfefca00d6bc830 367 SUPERFAMILY SSF102114 34 359 4.19E-52 T 12-10-2018 Amet_4234 252bfc8ea0d29f176dfefca00d6bc830 367 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 1.5E-25 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_4234 252bfc8ea0d29f176dfefca00d6bc830 367 Pfam PF04055 Radical SAM superfamily 81 231 7.7E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_4234 252bfc8ea0d29f176dfefca00d6bc830 367 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 365 5.2E-142 T 12-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 Amet_2888 b611541015b278d3bfa1c4e214b8a5e4 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 56.98 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Amet_2888 b611541015b278d3bfa1c4e214b8a5e4 143 SUPERFAMILY SSF89447 1 135 1.2E-52 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Amet_2888 b611541015b278d3bfa1c4e214b8a5e4 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 141 4.7E-53 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Amet_2888 b611541015b278d3bfa1c4e214b8a5e4 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 1.0E-77 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Amet_2888 b611541015b278d3bfa1c4e214b8a5e4 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 138 8.9E-22 T 12-10-2018 IPR020603 MraZ domain Amet_2888 b611541015b278d3bfa1c4e214b8a5e4 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 3.7E-21 T 12-10-2018 IPR020603 MraZ domain Amet_2888 b611541015b278d3bfa1c4e214b8a5e4 143 Gene3D G3DSA:2.40.330.20 1 142 1.0E-53 T 12-10-2018 IPR038619 MraZ superfamily Amet_0718 55a81e71eafab96d5057937b7c84f141 682 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 632 2.6E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0718 55a81e71eafab96d5057937b7c84f141 682 Pfam PF17203 Single cache domain 3 196 299 5.0E-10 T 12-10-2018 IPR033463 Single cache domain 3 Amet_0718 55a81e71eafab96d5057937b7c84f141 682 SUPERFAMILY SSF103190 193 297 9.81E-16 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_0718 55a81e71eafab96d5057937b7c84f141 682 SMART SM00304 322 377 2.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0718 55a81e71eafab96d5057937b7c84f141 682 SMART SM00283 406 681 5.7E-63 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0718 55a81e71eafab96d5057937b7c84f141 682 SUPERFAMILY SSF58104 352 680 9.68E-63 T 12-10-2018 Amet_0718 55a81e71eafab96d5057937b7c84f141 682 Gene3D G3DSA:1.20.1480.50 286 383 2.0E-7 T 12-10-2018 Amet_0718 55a81e71eafab96d5057937b7c84f141 682 Gene3D G3DSA:1.10.287.950 419 681 1.0E-57 T 12-10-2018 Amet_0718 55a81e71eafab96d5057937b7c84f141 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 3.4E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_0718 55a81e71eafab96d5057937b7c84f141 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 3.4E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_0718 55a81e71eafab96d5057937b7c84f141 682 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 3.4E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_1449 5bba93a004f13a34a235973398f42e90 662 Pfam PF02743 Cache domain 35 264 5.1E-25 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_1449 5bba93a004f13a34a235973398f42e90 662 Gene3D G3DSA:1.10.287.950 421 661 2.7E-55 T 12-10-2018 Amet_1449 5bba93a004f13a34a235973398f42e90 662 Gene3D G3DSA:3.30.450.20 138 284 6.7E-32 T 12-10-2018 Amet_1449 5bba93a004f13a34a235973398f42e90 662 Gene3D G3DSA:1.10.8.500 301 357 3.9E-7 T 12-10-2018 Amet_1449 5bba93a004f13a34a235973398f42e90 662 SMART SM00283 386 661 2.7E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_1449 5bba93a004f13a34a235973398f42e90 662 SMART SM00304 302 357 8.8E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1449 5bba93a004f13a34a235973398f42e90 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 612 1.0E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_1449 5bba93a004f13a34a235973398f42e90 662 SUPERFAMILY SSF58104 332 661 1.31E-59 T 12-10-2018 Amet_0065 55d10082cf8eac20359c4cdbc92681cb 467 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 192 1.7E-16 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_0065 55d10082cf8eac20359c4cdbc92681cb 467 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 7 458 4.8E-147 T 12-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Amet_0065 55d10082cf8eac20359c4cdbc92681cb 467 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 4 448 42.619 T 12-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Amet_0065 55d10082cf8eac20359c4cdbc92681cb 467 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 446 1.9E-38 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Amet_0065 55d10082cf8eac20359c4cdbc92681cb 467 SUPERFAMILY SSF52317 254 456 8.83E-29 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0065 55d10082cf8eac20359c4cdbc92681cb 467 SUPERFAMILY SSF52540 6 196 8.31E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0065 55d10082cf8eac20359c4cdbc92681cb 467 Gene3D G3DSA:3.40.50.300 6 195 8.0E-29 T 12-10-2018 Amet_0065 55d10082cf8eac20359c4cdbc92681cb 467 Gene3D G3DSA:3.40.50.880 262 466 3.1E-9 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0746 63b889957ad5a01508bed217f1897867 94 SUPERFAMILY SSF143120 4 76 2.49E-15 T 12-10-2018 IPR036165 YefM-like superfamily Amet_0746 63b889957ad5a01508bed217f1897867 94 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 69 3.5E-12 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Amet_0746 63b889957ad5a01508bed217f1897867 94 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 57 2.5E-8 T 12-10-2018 Amet_1367 fa656764d3bfb268f5e80422ef0fbf36 227 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 28 226 2.9E-81 T 12-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 Amet_1367 fa656764d3bfb268f5e80422ef0fbf36 227 Pfam PF01471 Putative peptidoglycan binding domain 37 92 2.9E-19 T 12-10-2018 IPR002477 Peptidoglycan binding-like Amet_1367 fa656764d3bfb268f5e80422ef0fbf36 227 Pfam PF07486 Cell Wall Hydrolase 128 225 1.0E-29 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 Amet_1367 fa656764d3bfb268f5e80422ef0fbf36 227 Gene3D G3DSA:1.10.101.10 25 100 1.4E-23 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amet_1367 fa656764d3bfb268f5e80422ef0fbf36 227 Gene3D G3DSA:1.10.10.2520 112 191 1.5E-31 T 12-10-2018 Amet_1367 fa656764d3bfb268f5e80422ef0fbf36 227 Gene3D G3DSA:2.40.10.420 192 226 2.2E-19 T 12-10-2018 Amet_1367 fa656764d3bfb268f5e80422ef0fbf36 227 SUPERFAMILY SSF47090 29 94 2.62E-21 T 12-10-2018 IPR036365 PGBD-like superfamily Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 SUPERFAMILY SSF54631 66 204 7.07E-29 T 12-10-2018 Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 Pfam PF00571 CBS domain 97 140 5.3E-10 T 12-10-2018 IPR000644 CBS domain Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 Pfam PF00571 CBS domain 149 204 5.8E-7 T 12-10-2018 IPR000644 CBS domain Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 9 451 1.3E-200 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 SMART SM00116 157 205 1.0E-7 T 12-10-2018 IPR000644 CBS domain Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 SMART SM00116 97 144 1.4E-9 T 12-10-2018 IPR000644 CBS domain Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 SUPERFAMILY SSF51412 5 474 1.44E-124 T 12-10-2018 Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 PIRSF PIRSF000130 1 485 2.3E-212 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 9 483 86.164 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 Gene3D G3DSA:3.20.20.70 1 483 5.6E-223 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 SMART SM01240 8 470 0.0 T 12-10-2018 Amet_0909 f660966eea95fffb6c9c60a444c7b7f2 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 470 4.4E-167 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Amet_0531 01434a6d46ade095247efa24781ff4f5 208 Gene3D G3DSA:3.40.50.1240 2 207 2.7E-71 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Amet_0531 01434a6d46ade095247efa24781ff4f5 208 SUPERFAMILY SSF53254 3 203 1.44E-59 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Amet_0531 01434a6d46ade095247efa24781ff4f5 208 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 198 2.2E-58 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amet_0531 01434a6d46ade095247efa24781ff4f5 208 SMART SM00855 3 157 5.5E-19 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amet_0531 01434a6d46ade095247efa24781ff4f5 208 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Amet_0531 01434a6d46ade095247efa24781ff4f5 208 PIRSF PIRSF000709 3 188 1.5E-20 T 12-10-2018 Amet_2225 d9559fb082e56f260e741cf8a0802576 429 Pfam PF16360 GTP-binding GTPase Middle Region 122 200 1.8E-30 T 12-10-2018 IPR032305 GTP-binding protein, middle domain Amet_2225 d9559fb082e56f260e741cf8a0802576 429 Gene3D G3DSA:3.40.50.11060 24 147 1.4E-41 T 12-10-2018 Amet_2225 d9559fb082e56f260e741cf8a0802576 429 SUPERFAMILY SSF52540 197 374 1.65E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2225 d9559fb082e56f260e741cf8a0802576 429 Gene3D G3DSA:3.40.50.300 205 375 4.0E-37 T 12-10-2018 Amet_2225 d9559fb082e56f260e741cf8a0802576 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 283 301 1.4E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2225 d9559fb082e56f260e741cf8a0802576 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 208 228 1.4E-6 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2225 d9559fb082e56f260e741cf8a0802576 429 Hamap MF_00900 GTPase HflX [hflX]. 35 401 47.512 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 Amet_2225 d9559fb082e56f260e741cf8a0802576 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 14 371 5.2E-137 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 Amet_2225 d9559fb082e56f260e741cf8a0802576 429 PIRSF PIRSF006809 4 428 6.4E-144 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 Amet_2225 d9559fb082e56f260e741cf8a0802576 429 Pfam PF01926 50S ribosome-binding GTPase 208 334 2.0E-18 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2225 d9559fb082e56f260e741cf8a0802576 429 Pfam PF13167 GTP-binding GTPase N-terminal 32 120 4.0E-32 T 12-10-2018 IPR025121 GTPase HflX, N-terminal Amet_4452 123bef8a69cc0eef81593810cb54a3b0 123 Gene3D G3DSA:1.10.8.50 1 72 2.4E-31 T 12-10-2018 Amet_4452 123bef8a69cc0eef81593810cb54a3b0 123 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.1E-54 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4452 123bef8a69cc0eef81593810cb54a3b0 123 Pfam PF00416 Ribosomal protein S13/S18 3 109 2.5E-34 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4452 123bef8a69cc0eef81593810cb54a3b0 123 SUPERFAMILY SSF46946 2 121 4.71E-46 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Amet_4452 123bef8a69cc0eef81593810cb54a3b0 123 PIRSF PIRSF002134 1 123 4.5E-45 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4452 123bef8a69cc0eef81593810cb54a3b0 123 Gene3D G3DSA:4.10.910.10 73 123 5.3E-25 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4452 123bef8a69cc0eef81593810cb54a3b0 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 28.333 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4452 123bef8a69cc0eef81593810cb54a3b0 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 Pfam PF00231 ATP synthase 5 288 8.6E-95 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 Gene3D G3DSA:1.10.287.80 7 284 3.5E-102 T 12-10-2018 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 Gene3D G3DSA:3.40.1380.10 62 207 3.5E-102 T 12-10-2018 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 PRINTS PR00126 ATP synthase gamma subunit signature 163 180 1.6E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 1.6E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.6E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.6E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 SUPERFAMILY SSF52943 5 288 3.27E-85 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 288 34.713 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0352 cd6ff98087595bf45410b031a1c86bab 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 5 288 2.0E-96 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0184 46f62eb73d5d0dca3cfcc01245bd93be 763 SUPERFAMILY SSF55383 673 757 4.84E-22 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_0184 46f62eb73d5d0dca3cfcc01245bd93be 763 Pfam PF07833 Copper amine oxidase N-terminal domain 671 762 3.8E-26 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_0184 46f62eb73d5d0dca3cfcc01245bd93be 763 Gene3D G3DSA:3.30.457.10 674 744 4.3E-15 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_3654 f48dc6a4e574c95a10d70dd0d8f60d3b 88 PIRSF PIRSF010606 1 86 1.1E-29 T 12-10-2018 IPR016571 Spore coat assembly protein CotJB Amet_3654 f48dc6a4e574c95a10d70dd0d8f60d3b 88 Pfam PF12652 CotJB protein 10 85 9.1E-29 T 12-10-2018 IPR024207 Spore coat assembly protein CotJB, domain Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 Gene3D G3DSA:1.10.150.20 70 168 2.0E-14 T 12-10-2018 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 Pfam PF04545 Sigma-70, region 4 303 345 2.3E-6 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 319 345 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 Gene3D G3DSA:1.10.10.10 298 356 1.8E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 Gene3D G3DSA:1.10.150.20 2 69 1.7E-17 T 12-10-2018 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 SUPERFAMILY SSF47789 92 146 6.15E-12 T 12-10-2018 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 SUPERFAMILY SSF47789 5 64 6.15E-15 T 12-10-2018 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 4 59 4.9E-16 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 88 151 1.4E-20 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 10 64 6.0E-7 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 98 147 2.0E-6 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_2144 3707e0cd73b8d844ecd7cfb431d2d15e 912 SUPERFAMILY SSF88659 293 351 6.98E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_3851 9bdfad73dc0d7e40ac491b8d1adc2abc 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3851 9bdfad73dc0d7e40ac491b8d1adc2abc 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3851 9bdfad73dc0d7e40ac491b8d1adc2abc 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.6E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3851 9bdfad73dc0d7e40ac491b8d1adc2abc 209 SUPERFAMILY SSF46689 7 78 2.82E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3851 9bdfad73dc0d7e40ac491b8d1adc2abc 209 Gene3D G3DSA:1.10.357.10 2 190 2.9E-21 T 12-10-2018 Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 Gene3D G3DSA:1.10.10.10 1 74 2.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 SUPERFAMILY SSF48008 78 212 8.63E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 SMART SM00345 15 73 2.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 Gene3D G3DSA:1.20.120.530 77 217 1.9E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 Pfam PF07729 FCD domain 83 206 6.7E-20 T 12-10-2018 IPR011711 GntR, C-terminal Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 3.2E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 SUPERFAMILY SSF46785 9 99 3.44E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0553 a798335141b015f66cc6ff04b6f374a2 218 SMART SM00895 83 208 2.1E-13 T 12-10-2018 IPR011711 GntR, C-terminal Amet_0325 713c73ec33bf12c18af46860128ed7e2 195 SUPERFAMILY SSF57716 146 193 4.13E-15 T 12-10-2018 Amet_0325 713c73ec33bf12c18af46860128ed7e2 195 PIRSF PIRSF035805 8 195 3.2E-68 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Amet_0325 713c73ec33bf12c18af46860128ed7e2 195 Hamap MF_00124 Thymidine kinase [tdk]. 10 194 35.994 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Amet_0325 713c73ec33bf12c18af46860128ed7e2 195 SUPERFAMILY SSF52540 11 146 3.99E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0325 713c73ec33bf12c18af46860128ed7e2 195 Gene3D G3DSA:3.40.50.300 3 145 5.8E-56 T 12-10-2018 Amet_0325 713c73ec33bf12c18af46860128ed7e2 195 Pfam PF00265 Thymidine kinase 11 191 1.2E-59 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Amet_0325 713c73ec33bf12c18af46860128ed7e2 195 Gene3D G3DSA:3.30.60.20 146 195 7.8E-24 T 12-10-2018 Amet_0325 713c73ec33bf12c18af46860128ed7e2 195 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 178 191 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Amet_4549 7954591a1928b3752dab3c19e51027ad 518 Pfam PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit 5 512 2.4E-279 T 12-10-2018 IPR015130 D-Lysine 5,6-aminomutase alpha subunit Amet_4549 7954591a1928b3752dab3c19e51027ad 518 SUPERFAMILY SSF51703 2 515 3.06E-239 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_4549 7954591a1928b3752dab3c19e51027ad 518 Gene3D G3DSA:3.20.20.440 1 516 1.4E-240 T 12-10-2018 IPR037086 D-Lysine 5,6-aminomutase alpha subunit superfamily Amet_1536 2bdf84ea738bf6f4f4063cdda6e6051d 154 Gene3D G3DSA:3.40.50.300 5 153 3.9E-20 T 12-10-2018 Amet_1536 2bdf84ea738bf6f4f4063cdda6e6051d 154 Pfam PF00005 ABC transporter 19 55 1.4E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1536 2bdf84ea738bf6f4f4063cdda6e6051d 154 SUPERFAMILY SSF52540 4 55 9.31E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1536 2bdf84ea738bf6f4f4063cdda6e6051d 154 SUPERFAMILY SSF52540 18 137 4.43E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0517 ceb5e1056afdfb7e22728c9801cd7eac 538 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 291 537 6.4E-70 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Amet_0517 ceb5e1056afdfb7e22728c9801cd7eac 538 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 272 3.8E-66 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Amet_0517 ceb5e1056afdfb7e22728c9801cd7eac 538 Gene3D G3DSA:1.10.3720.10 333 538 1.4E-24 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0517 ceb5e1056afdfb7e22728c9801cd7eac 538 SUPERFAMILY SSF161098 78 262 8.63E-28 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0517 ceb5e1056afdfb7e22728c9801cd7eac 538 Gene3D G3DSA:1.10.3720.10 73 274 3.1E-25 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0517 ceb5e1056afdfb7e22728c9801cd7eac 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 366 536 5.5E-10 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_0517 ceb5e1056afdfb7e22728c9801cd7eac 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 275 8.2E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_0517 ceb5e1056afdfb7e22728c9801cd7eac 538 SUPERFAMILY SSF161098 341 528 6.15E-27 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2448 dc601f16a7c49cc31efb156e0c61463d 536 SUPERFAMILY SSF89372 5 297 2.62E-29 T 12-10-2018 Amet_2739 fefbbd02cc94cf99c89d416410fa078b 114 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 112 4.9E-27 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 Amet_2739 fefbbd02cc94cf99c89d416410fa078b 114 SUPERFAMILY SSF52980 8 105 5.58E-27 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Amet_2739 fefbbd02cc94cf99c89d416410fa078b 114 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 112 22.378 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 Amet_2739 fefbbd02cc94cf99c89d416410fa078b 114 Pfam PF02021 Uncharacterised protein family UPF0102 9 99 9.1E-29 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 Amet_2739 fefbbd02cc94cf99c89d416410fa078b 114 Gene3D G3DSA:3.40.1350.10 9 114 2.3E-31 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.803 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 PRINTS PR00315 GTP-binding elongation factor signature 132 141 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 PRINTS PR00315 GTP-binding elongation factor signature 59 67 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 SUPERFAMILY SSF50465 305 397 4.6E-36 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 SUPERFAMILY SSF50447 207 304 2.29E-28 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 Gene3D G3DSA:2.40.30.10 208 337 9.3E-52 T 12-10-2018 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.8E-14 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 SUPERFAMILY SSF52540 6 221 5.27E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 2.8E-15 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 9.6E-34 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 Gene3D G3DSA:2.40.30.10 341 396 1.2E-28 T 12-10-2018 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 Gene3D G3DSA:3.40.50.300 2 205 7.5E-68 T 12-10-2018 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.3E-60 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_4480 83ae6695044fe4e84470bb7a9bd05204 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 2.1E-223 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_1733 c5fc316d6c7483f11bef6944fa7e7bf4 357 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1733 c5fc316d6c7483f11bef6944fa7e7bf4 357 Pfam PF00005 ABC transporter 18 160 9.4E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1733 c5fc316d6c7483f11bef6944fa7e7bf4 357 Pfam PF08402 TOBE domain 274 344 2.2E-7 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amet_1733 c5fc316d6c7483f11bef6944fa7e7bf4 357 SUPERFAMILY SSF52540 3 241 1.91E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1733 c5fc316d6c7483f11bef6944fa7e7bf4 357 Gene3D G3DSA:2.40.50.140 277 337 1.1E-17 T 12-10-2018 Amet_1733 c5fc316d6c7483f11bef6944fa7e7bf4 357 SUPERFAMILY SSF50331 236 349 1.17E-17 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amet_1733 c5fc316d6c7483f11bef6944fa7e7bf4 357 Gene3D G3DSA:2.40.50.100 239 349 1.1E-17 T 12-10-2018 Amet_1733 c5fc316d6c7483f11bef6944fa7e7bf4 357 SMART SM00382 27 210 4.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1733 c5fc316d6c7483f11bef6944fa7e7bf4 357 Gene3D G3DSA:3.40.50.300 1 237 3.9E-77 T 12-10-2018 Amet_3855 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_3855 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_3855 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3855 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_1471 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_1471 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1471 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1471 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_3561 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_3561 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_3561 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3561 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_4684 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_4684 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_4684 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4684 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_1046 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_1046 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1046 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1046 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_2114 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_2114 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2114 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2114 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_2846 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_2846 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2846 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2846 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_3970 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_3970 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_3970 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3970 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_4081 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_4081 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_4081 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4081 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_1765 098e06d088a098fe9ada1279fcdfec10 517 Gene3D G3DSA:3.30.420.10 135 329 6.9E-7 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_1765 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF53098 129 289 2.2E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1765 098e06d088a098fe9ada1279fcdfec10 517 SUPERFAMILY SSF46689 10 86 5.11E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1765 098e06d088a098fe9ada1279fcdfec10 517 Pfam PF00665 Integrase core domain 125 249 9.7E-18 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_4164 563683c5f913a3483a28de81c9866ae7 336 SMART SM00382 46 230 8.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4164 563683c5f913a3483a28de81c9866ae7 336 SUPERFAMILY SSF52540 16 241 4.9E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4164 563683c5f913a3483a28de81c9866ae7 336 Gene3D G3DSA:3.40.50.300 13 283 4.9E-61 T 12-10-2018 Amet_4164 563683c5f913a3483a28de81c9866ae7 336 Pfam PF00005 ABC transporter 37 181 9.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0921 c528c254626b04dff86fabf013338bbe 738 Gene3D G3DSA:3.30.1330.10 381 555 3.2E-67 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_0921 c528c254626b04dff86fabf013338bbe 738 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 10 732 2.0E-295 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_0921 c528c254626b04dff86fabf013338bbe 738 SUPERFAMILY SSF56042 194 420 8.07E-50 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_0921 c528c254626b04dff86fabf013338bbe 738 Pfam PF00586 AIR synthase related protein, N-terminal domain 435 552 2.0E-23 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Amet_0921 c528c254626b04dff86fabf013338bbe 738 Pfam PF00586 AIR synthase related protein, N-terminal domain 79 182 2.4E-25 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Amet_0921 c528c254626b04dff86fabf013338bbe 738 PIRSF PIRSF001587 1 735 0.0 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_0921 c528c254626b04dff86fabf013338bbe 738 SUPERFAMILY SSF55326 394 560 6.67E-60 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_0921 c528c254626b04dff86fabf013338bbe 738 Gene3D G3DSA:3.30.1330.10 37 185 1.1E-131 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_0921 c528c254626b04dff86fabf013338bbe 738 Pfam PF02769 AIR synthase related protein, C-terminal domain 195 347 2.4E-29 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Amet_0921 c528c254626b04dff86fabf013338bbe 738 Pfam PF02769 AIR synthase related protein, C-terminal domain 565 701 2.8E-20 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Amet_0921 c528c254626b04dff86fabf013338bbe 738 SUPERFAMILY SSF55326 28 189 4.78E-51 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_0921 c528c254626b04dff86fabf013338bbe 738 Gene3D G3DSA:3.90.650.10 21 350 1.1E-131 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_0921 c528c254626b04dff86fabf013338bbe 738 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 738 317.757 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_0921 c528c254626b04dff86fabf013338bbe 738 Gene3D G3DSA:3.90.650.10 560 734 3.8E-47 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_0921 c528c254626b04dff86fabf013338bbe 738 SUPERFAMILY SSF56042 562 732 1.45E-42 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_0564 07458e6bc9b97580bc1be4fad1d846d3 432 Pfam PF09861 Domain of unknown function (DUF2088) 8 205 1.6E-75 T 12-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 Amet_0564 07458e6bc9b97580bc1be4fad1d846d3 432 Gene3D G3DSA:3.90.226.30 6 419 6.7E-131 T 12-10-2018 Amet_0564 07458e6bc9b97580bc1be4fad1d846d3 432 Gene3D G3DSA:3.40.50.11440 35 275 6.7E-131 T 12-10-2018 Amet_4561 4d220da5b829826fdadb7b0f4cc06c86 171 Pfam PF17099 Tryptophan transporter TrpP 2 163 8.8E-47 T 12-10-2018 IPR031360 Tryptophan transporter TrpP Amet_4561 4d220da5b829826fdadb7b0f4cc06c86 171 Gene3D G3DSA:1.10.1760.20 1 166 1.1E-6 T 12-10-2018 Amet_4561 4d220da5b829826fdadb7b0f4cc06c86 171 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 163 5.0E-81 T 12-10-2018 Amet_1911 f679a24bfe16c9fb90a728a2e80cb12f 265 Gene3D G3DSA:1.10.10.60 57 112 1.5E-14 T 12-10-2018 Amet_1911 f679a24bfe16c9fb90a728a2e80cb12f 265 SMART SM00342 23 106 2.7E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_1911 f679a24bfe16c9fb90a728a2e80cb12f 265 SUPERFAMILY SSF46689 9 56 4.59E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1911 f679a24bfe16c9fb90a728a2e80cb12f 265 Pfam PF12833 Helix-turn-helix domain 29 107 2.8E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_1911 f679a24bfe16c9fb90a728a2e80cb12f 265 SUPERFAMILY SSF46689 59 108 3.27E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1911 f679a24bfe16c9fb90a728a2e80cb12f 265 Gene3D G3DSA:1.10.10.60 3 56 3.7E-16 T 12-10-2018 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 Pfam PF08447 PAS fold 139 221 4.6E-21 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 Gene3D G3DSA:3.30.450.20 109 177 4.7E-13 T 12-10-2018 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 324 1.1E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 Gene3D G3DSA:3.30.565.10 331 487 5.0E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 Gene3D G3DSA:1.10.287.130 236 327 6.3E-20 T 12-10-2018 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 3.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 3.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 437 3.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 481 3.5E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 SUPERFAMILY SSF55785 115 229 6.11E-20 T 12-10-2018 IPR035965 PAS domain superfamily Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 SMART SM00086 185 227 2.9E-6 T 12-10-2018 IPR001610 PAC motif Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 SMART SM00387 372 484 2.4E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 SUPERFAMILY SSF55874 315 482 1.44E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 SUPERFAMILY SSF47384 240 325 4.51E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 110 232 3.6E-10 T 12-10-2018 IPR000014 PAS domain Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 SMART SM00388 254 326 7.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 483 4.1E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1275 1ed5847676326b24c758c0127dd48d1b 516 Gene3D G3DSA:2.10.70.100 183 229 8.1E-13 T 12-10-2018 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 PIRSF PIRSF006487 1 369 1.7E-107 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 5 364 1.2E-135 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 365 47.346 T 12-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 SUPERFAMILY SSF103025 3 283 1.22E-102 T 12-10-2018 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 Gene3D G3DSA:2.40.30.110 283 365 5.2E-30 T 12-10-2018 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 260 1.2E-98 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 Gene3D G3DSA:3.30.70.1400 53 139 9.2E-97 T 12-10-2018 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 Gene3D G3DSA:3.30.1360.120 6 238 9.2E-97 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 Gene3D G3DSA:4.10.1250.10 239 282 1.8E-18 T 12-10-2018 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 269 357 6.7E-27 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Amet_1354 ec4356b30b8a6203eba6f3c84369d723 369 SUPERFAMILY SSF101790 276 368 7.36E-26 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Amet_2392 c3e290c5136ac4e586ccce91b2b305ce 89 SUPERFAMILY SSF47413 2 58 8.73E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2392 c3e290c5136ac4e586ccce91b2b305ce 89 Pfam PF12844 Helix-turn-helix domain 6 58 2.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2392 c3e290c5136ac4e586ccce91b2b305ce 89 Gene3D G3DSA:1.10.260.40 1 64 2.0E-8 T 12-10-2018 Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 Gene3D G3DSA:3.30.420.40 419 562 2.2E-82 T 12-10-2018 Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 SUPERFAMILY SSF53067 9 260 7.2E-53 T 12-10-2018 Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 Gene3D G3DSA:3.30.420.40 10 260 3.8E-67 T 12-10-2018 Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 325 578 1.8E-40 T 12-10-2018 IPR008275 CoA enzyme activase Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 Gene3D G3DSA:3.30.420.40 101 245 3.8E-67 T 12-10-2018 Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 SUPERFAMILY SSF53067 324 579 1.41E-51 T 12-10-2018 Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 10 260 1.9E-17 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 325 579 2.1E-38 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 908 1226 2.2E-56 T 12-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 Gene3D G3DSA:3.30.420.40 325 579 2.2E-82 T 12-10-2018 Amet_1358 36a23d02dd42f4dfc1060481be55fc0e 1434 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 674 893 2.9E-82 T 12-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Amet_2659 62eddcecdc2eaa156856fa1d5ea79ae9 178 Gene3D G3DSA:1.20.120.1760 3 176 8.8E-14 T 12-10-2018 Amet_2659 62eddcecdc2eaa156856fa1d5ea79ae9 178 PIRSF PIRSF000847 1 178 3.6E-51 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Amet_2659 62eddcecdc2eaa156856fa1d5ea79ae9 178 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amet_2659 62eddcecdc2eaa156856fa1d5ea79ae9 178 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 7.3E-18 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amet_2659 62eddcecdc2eaa156856fa1d5ea79ae9 178 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 177 5.4E-55 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 SUPERFAMILY SSF47384 279 362 6.08E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 361 4.3E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 SUPERFAMILY SSF55874 351 516 1.83E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 5.4E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 5.4E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 5.4E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 5.4E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 SMART SM00387 406 518 3.3E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 407 516 7.2E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 SMART SM00388 296 362 1.4E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 Gene3D G3DSA:1.10.287.130 239 357 5.2E-24 T 12-10-2018 Amet_1519 7b1bf64b950765199b729ecd02a8c504 518 Gene3D G3DSA:3.30.565.10 369 518 5.6E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1218 04f2e1fc7110f28d951e90ff0d9fe4fe 142 Pfam PF08973 Domain of unknown function (DUF1893) 7 136 9.3E-48 T 12-10-2018 IPR015067 Protein of unknown function DUF1893 Amet_1218 04f2e1fc7110f28d951e90ff0d9fe4fe 142 Gene3D G3DSA:3.40.140.30 2 138 7.9E-46 T 12-10-2018 IPR037081 Hypothetical protein TM1506 Amet_1218 04f2e1fc7110f28d951e90ff0d9fe4fe 142 SUPERFAMILY SSF53927 12 135 5.41E-32 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amet_4736 3cdda6e8ff0b76e441dd12b18732110a 119 SUPERFAMILY SSF46785 3 118 6.7E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4736 3cdda6e8ff0b76e441dd12b18732110a 119 Pfam PF03965 Penicillinase repressor 7 116 3.8E-22 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 Amet_4736 3cdda6e8ff0b76e441dd12b18732110a 119 Gene3D G3DSA:1.10.4040.10 68 119 1.5E-9 T 12-10-2018 Amet_4736 3cdda6e8ff0b76e441dd12b18732110a 119 Gene3D G3DSA:1.10.10.10 7 63 3.2E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4736 3cdda6e8ff0b76e441dd12b18732110a 119 PIRSF PIRSF019455 1 119 2.4E-28 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 SUPERFAMILY SSF50104 1 62 3.66E-21 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 SUPERFAMILY SSF50249 128 185 8.05E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 3.4E-26 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 6.7E-26 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 1.7E-76 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 Gene3D G3DSA:2.40.50.140 128 185 3.9E-27 T 12-10-2018 Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 SMART SM00841 129 184 3.1E-32 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 Gene3D G3DSA:2.30.30.30 1 62 4.3E-27 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 49.616 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 SUPERFAMILY SSF50249 65 129 8.14E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 PIRSF PIRSF005901 1 185 2.8E-66 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 SMART SM01185 67 121 2.6E-24 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 Gene3D G3DSA:2.40.50.140 64 126 1.6E-25 T 12-10-2018 Amet_2490 5defc6a1aa731c6bd33a82cd80431a35 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 4.6E-21 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Amet_1383 a3694369772fe7664d15e9a8a78440a4 517 PIRSF PIRSF038958 4 516 1.2E-137 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Amet_1383 a3694369772fe7664d15e9a8a78440a4 517 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 363 505 4.8E-27 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Amet_1383 a3694369772fe7664d15e9a8a78440a4 517 Pfam PF01943 Polysaccharide biosynthesis protein 9 311 1.3E-29 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Amet_0577 9f0ac712be6368f83727262a6180931f 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.9E-115 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Amet_0577 9f0ac712be6368f83727262a6180931f 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.307 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Amet_0577 9f0ac712be6368f83727262a6180931f 252 Gene3D G3DSA:3.20.20.70 1 252 3.1E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0577 9f0ac712be6368f83727262a6180931f 252 SUPERFAMILY SSF51366 1 251 3.92E-85 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amet_0577 9f0ac712be6368f83727262a6180931f 252 Pfam PF00977 Histidine biosynthesis protein 5 234 1.4E-89 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Amet_0577 9f0ac712be6368f83727262a6180931f 252 TIGRFAM TIGR03572 WbuZ: glycosyl amidation-associated protein WbuZ 1 231 8.5E-91 T 12-10-2018 IPR020021 Glycosyl amidation-associated protein, WbuZ GO:0016833 Amet_2564 796c89d6a62b5445b40801235c2eb8a8 793 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 94 415 8.4E-80 T 12-10-2018 IPR010090 Phage tail tape measure protein Amet_2564 796c89d6a62b5445b40801235c2eb8a8 793 Pfam PF10145 Phage-related minor tail protein 128 326 1.0E-58 T 12-10-2018 IPR010090 Phage tail tape measure protein Amet_3773 137e80e02535cf3cf5c33581246e4ec7 328 Gene3D G3DSA:1.10.3470.10 3 328 2.0E-84 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Amet_3773 137e80e02535cf3cf5c33581246e4ec7 328 Pfam PF01032 FecCD transport family 16 325 3.4E-90 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amet_3773 137e80e02535cf3cf5c33581246e4ec7 328 SUPERFAMILY SSF81345 5 325 9.68E-74 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Amet_4696 5d8cfd92253168bb63067d041285d252 127 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Amet_4696 5d8cfd92253168bb63067d041285d252 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 7.9E-18 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amet_4696 5d8cfd92253168bb63067d041285d252 127 SUPERFAMILY SSF54593 3 125 5.37E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4696 5d8cfd92253168bb63067d041285d252 127 Gene3D G3DSA:3.10.180.10 1 126 1.3E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Gene3D G3DSA:3.40.50.920 260 414 4.1E-62 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Gene3D G3DSA:3.40.920.10 415 624 6.2E-92 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 SUPERFAMILY SSF53323 415 668 3.14E-90 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 SMART SM00890 621 679 3.9E-32 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 248 8.8E-78 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 SUPERFAMILY SSF52518 789 1170 9.09E-136 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Gene3D G3DSA:3.40.50.970 788 1171 1.4E-174 T 12-10-2018 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 SUPERFAMILY SSF54862 665 833 1.26E-22 T 12-10-2018 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 4.3E-34 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Pfam PF10371 Domain of unknown function 624 678 3.1E-24 T 12-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 SUPERFAMILY SSF52518 3 258 5.0E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 958 1068 5.1E-11 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Gene3D G3DSA:3.40.50.970 2 258 2.2E-109 T 12-10-2018 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Gene3D G3DSA:3.30.70.20 669 786 1.1E-44 T 12-10-2018 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Gene3D G3DSA:4.10.780.10 631 668 1.3E-7 T 12-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 PIRSF PIRSF000159 1 1171 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Pfam PF13484 4Fe-4S double cluster binding domain 688 757 4.8E-11 T 12-10-2018 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1170 0.0 T 12-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 373 5.6E-15 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Amet_4657 dfb8ec235b1dc472c6c2d677554c341f 1171 SUPERFAMILY SSF52922 260 411 7.57E-50 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_0257 95172521ce791390a9834e1b4f7ab466 217 SMART SM00877 34 121 4.7E-10 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0257 95172521ce791390a9834e1b4f7ab466 217 SMART SM00877 145 214 9.2E-9 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0257 95172521ce791390a9834e1b4f7ab466 217 Gene3D G3DSA:3.30.70.1810 107 217 4.6E-53 T 12-10-2018 Amet_0257 95172521ce791390a9834e1b4f7ab466 217 PIRSF PIRSF012290 1 217 8.1E-86 T 12-10-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0031469 Amet_0257 95172521ce791390a9834e1b4f7ab466 217 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 4 217 2.1E-110 T 12-10-2018 IPR030983 Ethanolamine utilization protein EutL GO:0005198 Amet_0257 95172521ce791390a9834e1b4f7ab466 217 Gene3D G3DSA:3.30.70.1810 7 106 9.9E-44 T 12-10-2018 Amet_0257 95172521ce791390a9834e1b4f7ab466 217 SUPERFAMILY SSF143414 154 208 4.45E-6 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_0257 95172521ce791390a9834e1b4f7ab466 217 SUPERFAMILY SSF143414 34 109 3.53E-5 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_0257 95172521ce791390a9834e1b4f7ab466 217 Pfam PF00936 BMC domain 156 208 3.6E-6 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0257 95172521ce791390a9834e1b4f7ab466 217 Pfam PF00936 BMC domain 35 108 1.8E-12 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3060 73b7708cce85916569779d31421b84b3 245 SMART SM00849 18 212 5.1E-6 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3060 73b7708cce85916569779d31421b84b3 245 Pfam PF12706 Beta-lactamase superfamily domain 31 213 5.0E-25 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3060 73b7708cce85916569779d31421b84b3 245 Gene3D G3DSA:3.60.15.10 1 244 6.0E-76 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_3060 73b7708cce85916569779d31421b84b3 245 SUPERFAMILY SSF56281 1 241 1.02E-51 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_0675 5392549bca7c9dec8c07f17462c79838 283 Pfam PF05651 Putative sugar diacid recognition 6 134 1.5E-26 T 12-10-2018 IPR008599 Putative sugar diacid recognition Amet_0675 5392549bca7c9dec8c07f17462c79838 283 Gene3D G3DSA:1.10.287.950 104 283 3.6E-32 T 12-10-2018 Amet_0675 5392549bca7c9dec8c07f17462c79838 283 SMART SM00283 85 283 0.0011 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0675 5392549bca7c9dec8c07f17462c79838 283 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 164 276 3.3E-22 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0675 5392549bca7c9dec8c07f17462c79838 283 SUPERFAMILY SSF58104 120 275 3.53E-33 T 12-10-2018 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Gene3D G3DSA:2.40.30.10 191 290 4.1E-37 T 12-10-2018 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 TIGRFAM TIGR01393 lepA: elongation factor 4 8 601 0.0 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Gene3D G3DSA:3.30.70.2570 485 559 3.6E-34 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 PRINTS PR00315 GTP-binding elongation factor signature 95 106 5.9E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 PRINTS PR00315 GTP-binding elongation factor signature 79 89 5.9E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 PRINTS PR00315 GTP-binding elongation factor signature 11 24 5.9E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 PRINTS PR00315 GTP-binding elongation factor signature 131 140 5.9E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 PRINTS PR00315 GTP-binding elongation factor signature 54 62 5.9E-15 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Gene3D G3DSA:3.30.70.3380 373 484 1.4E-40 T 12-10-2018 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 SUPERFAMILY SSF50447 171 293 1.52E-31 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Pfam PF06421 GTP-binding protein LepA C-terminus 493 599 1.4E-50 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 181 3.0E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 SUPERFAMILY SSF54980 297 375 5.4E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Pfam PF03144 Elongation factor Tu domain 2 210 280 8.7E-12 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Gene3D G3DSA:3.40.50.300 5 190 1.2E-74 T 12-10-2018 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Pfam PF00679 Elongation factor G C-terminus 404 491 1.4E-25 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Hamap MF_00071 Elongation factor 4 [lepA]. 1 602 300.901 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Gene3D G3DSA:3.30.70.870 291 372 1.2E-34 T 12-10-2018 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 SMART SM00838 403 489 2.5E-4 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 SUPERFAMILY SSF54980 403 499 1.34E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 Pfam PF00009 Elongation factor Tu GTP binding domain 8 186 8.8E-56 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3052 d85a2f7cda93e0799472ab8ba25a5f08 602 SUPERFAMILY SSF52540 6 210 8.79E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0354 3f407743bf13b822914a1c32e4f46a27 134 Gene3D G3DSA:2.60.15.10 2 89 3.2E-25 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0354 3f407743bf13b822914a1c32e4f46a27 134 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 130 20.15 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0354 3f407743bf13b822914a1c32e4f46a27 134 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 4.5E-22 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0354 3f407743bf13b822914a1c32e4f46a27 134 SUPERFAMILY SSF51344 4 85 1.57E-19 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0354 3f407743bf13b822914a1c32e4f46a27 134 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 128 1.2E-15 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Amet_0354 3f407743bf13b822914a1c32e4f46a27 134 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 129 2.5E-30 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0354 3f407743bf13b822914a1c32e4f46a27 134 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 12 81 7.0E-14 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0354 3f407743bf13b822914a1c32e4f46a27 134 Gene3D G3DSA:1.20.5.440 90 134 5.0E-16 T 12-10-2018 Amet_0354 3f407743bf13b822914a1c32e4f46a27 134 SUPERFAMILY SSF46604 87 131 3.66E-9 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0835 d53812df64394df2ca3a13432e637983 382 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 64 120 5.0E-16 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amet_0835 d53812df64394df2ca3a13432e637983 382 SUPERFAMILY SSF56349 62 366 1.15E-65 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_0835 d53812df64394df2ca3a13432e637983 382 Pfam PF00589 Phage integrase family 173 357 1.0E-25 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_0835 d53812df64394df2ca3a13432e637983 382 Pfam PF14657 Arm DNA-binding domain 11 54 1.4E-10 T 12-10-2018 IPR028259 AP2-like integrase, N-terminal domain Amet_0835 d53812df64394df2ca3a13432e637983 382 Gene3D G3DSA:1.10.150.130 61 160 3.2E-24 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Amet_0835 d53812df64394df2ca3a13432e637983 382 Gene3D G3DSA:1.10.443.10 161 371 7.8E-52 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_0463 a9dbe02de4d2deb0ddd691bf6bdae68c 297 Pfam PF03690 Uncharacterised protein family (UPF0160) 8 291 8.2E-72 T 12-10-2018 IPR003226 Metal-dependent protein hydrolase Amet_3881 28f32cf97f1eddc8190e3059c226a921 665 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 351 659 3.0E-5 T 12-10-2018 Amet_3881 28f32cf97f1eddc8190e3059c226a921 665 SUPERFAMILY SSF58104 335 664 1.31E-69 T 12-10-2018 Amet_3881 28f32cf97f1eddc8190e3059c226a921 665 Gene3D G3DSA:1.10.287.950 311 664 1.2E-67 T 12-10-2018 Amet_3881 28f32cf97f1eddc8190e3059c226a921 665 Gene3D G3DSA:3.30.450.20 145 285 6.1E-28 T 12-10-2018 Amet_3881 28f32cf97f1eddc8190e3059c226a921 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 458 617 1.2E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3881 28f32cf97f1eddc8190e3059c226a921 665 SUPERFAMILY SSF103190 56 184 8.83E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_3881 28f32cf97f1eddc8190e3059c226a921 665 Pfam PF02743 Cache domain 42 267 5.5E-30 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_3881 28f32cf97f1eddc8190e3059c226a921 665 SMART SM00283 389 664 1.4E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_4787 4e0701a4b350aa7f6cc7c70f20427fee 298 SUPERFAMILY SSF111331 3 293 1.23E-88 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Amet_4787 4e0701a4b350aa7f6cc7c70f20427fee 298 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 287 3.9E-68 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase Amet_4787 4e0701a4b350aa7f6cc7c70f20427fee 298 SMART SM00046 2 127 4.4E-10 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amet_4787 4e0701a4b350aa7f6cc7c70f20427fee 298 Gene3D G3DSA:2.60.200.40 125 283 2.9E-49 T 12-10-2018 Amet_4787 4e0701a4b350aa7f6cc7c70f20427fee 298 Gene3D G3DSA:3.40.50.10330 2 124 8.4E-44 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Amet_4787 4e0701a4b350aa7f6cc7c70f20427fee 298 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 124 2.0E-39 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amet_3616 0e2e60bc3489c6fe5918e092811d34f3 503 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 1 495 2.0E-164 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Amet_3616 0e2e60bc3489c6fe5918e092811d34f3 503 SUPERFAMILY SSF52317 186 401 2.14E-36 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_3616 0e2e60bc3489c6fe5918e092811d34f3 503 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 248 444 2.6E-60 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Amet_3616 0e2e60bc3489c6fe5918e092811d34f3 503 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 222 6.7E-20 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_3616 0e2e60bc3489c6fe5918e092811d34f3 503 Gene3D G3DSA:3.40.50.880 245 439 1.7E-18 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_3616 0e2e60bc3489c6fe5918e092811d34f3 503 SUPERFAMILY SSF52540 1 223 1.04E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3616 0e2e60bc3489c6fe5918e092811d34f3 503 Gene3D G3DSA:3.40.50.300 1 240 1.4E-55 T 12-10-2018 Amet_3616 0e2e60bc3489c6fe5918e092811d34f3 503 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 502 175.201 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Amet_3107 ce003f188d7494f14101383d330171c0 680 Pfam PF00204 DNA gyrase B 227 402 1.2E-29 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR01159 DNA gyrase subunit B signature 226 248 3.2E-21 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR01159 DNA gyrase subunit B signature 631 643 3.2E-21 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR01159 DNA gyrase subunit B signature 647 663 3.2E-21 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR01159 DNA gyrase subunit B signature 387 407 3.2E-21 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR01159 DNA gyrase subunit B signature 202 215 3.2E-21 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR01159 DNA gyrase subunit B signature 485 494 3.2E-21 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR01159 DNA gyrase subunit B signature 373 387 3.2E-21 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR01159 DNA gyrase subunit B signature 256 274 3.2E-21 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_3107 ce003f188d7494f14101383d330171c0 680 Gene3D G3DSA:3.40.50.670 415 680 6.0E-73 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_3107 ce003f188d7494f14101383d330171c0 680 Pfam PF01751 Toprim domain 434 554 2.2E-17 T 12-10-2018 IPR006171 TOPRIM domain Amet_3107 ce003f188d7494f14101383d330171c0 680 SUPERFAMILY SSF55874 9 224 2.78E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3107 ce003f188d7494f14101383d330171c0 680 SMART SM00433 41 671 1.6E-86 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_3107 ce003f188d7494f14101383d330171c0 680 SUPERFAMILY SSF56719 416 669 1.8E-56 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amet_3107 ce003f188d7494f14101383d330171c0 680 SUPERFAMILY SSF54211 227 402 3.98E-21 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_3107 ce003f188d7494f14101383d330171c0 680 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 606 666 1.4E-22 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Amet_3107 ce003f188d7494f14101383d330171c0 680 Gene3D G3DSA:3.30.565.10 5 226 1.0E-54 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3107 ce003f188d7494f14101383d330171c0 680 ProSitePatterns PS00177 DNA topoisomerase II signature. 437 445 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_3107 ce003f188d7494f14101383d330171c0 680 Gene3D G3DSA:3.30.230.10 227 405 1.9E-30 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR00418 DNA topoisomerase II family signature 73 86 8.9E-35 T 12-10-2018 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR00418 DNA topoisomerase II family signature 610 626 8.9E-35 T 12-10-2018 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR00418 DNA topoisomerase II family signature 435 449 8.9E-35 T 12-10-2018 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR00418 DNA topoisomerase II family signature 119 133 8.9E-35 T 12-10-2018 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR00418 DNA topoisomerase II family signature 510 526 8.9E-35 T 12-10-2018 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR00418 DNA topoisomerase II family signature 528 545 8.9E-35 T 12-10-2018 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR00418 DNA topoisomerase II family signature 38 53 8.9E-35 T 12-10-2018 Amet_3107 ce003f188d7494f14101383d330171c0 680 PRINTS PR00418 DNA topoisomerase II family signature 548 560 8.9E-35 T 12-10-2018 Amet_1511 be258ba26ea06de774c8642361c7890a 276 SUPERFAMILY SSF53335 27 210 7.62E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_1511 be258ba26ea06de774c8642361c7890a 276 Gene3D G3DSA:3.40.50.150 9 268 3.4E-23 T 12-10-2018 Amet_1511 be258ba26ea06de774c8642361c7890a 276 Pfam PF13847 Methyltransferase domain 60 141 4.1E-14 T 12-10-2018 IPR025714 Methyltransferase domain Amet_2680 3197b6dc396a8b14a58a271296b7e67c 348 PIRSF PIRSF004640 1 348 6.8E-149 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Amet_2680 3197b6dc396a8b14a58a271296b7e67c 348 SUPERFAMILY SSF56014 259 342 8.78E-13 T 12-10-2018 Amet_2680 3197b6dc396a8b14a58a271296b7e67c 348 SUPERFAMILY SSF51717 12 202 8.63E-10 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2680 3197b6dc396a8b14a58a271296b7e67c 348 Gene3D G3DSA:3.20.20.20 1 254 3.2E-108 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2680 3197b6dc396a8b14a58a271296b7e67c 348 Pfam PF04551 GcpE protein 5 347 4.3E-141 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Amet_2680 3197b6dc396a8b14a58a271296b7e67c 348 Gene3D G3DSA:3.30.413.10 255 348 6.9E-37 T 12-10-2018 Amet_2680 3197b6dc396a8b14a58a271296b7e67c 348 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2 342 1.3E-129 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Amet_2680 3197b6dc396a8b14a58a271296b7e67c 348 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 347 33.334 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Amet_1977 3970e401183192a27ca2f70978209e8a 44 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 2 40 2.3E-15 T 12-10-2018 IPR010022 Protein of unknown function XkdX Amet_0440 3970e401183192a27ca2f70978209e8a 44 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 2 40 2.3E-15 T 12-10-2018 IPR010022 Protein of unknown function XkdX Amet_4341 3970e401183192a27ca2f70978209e8a 44 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 2 40 2.3E-15 T 12-10-2018 IPR010022 Protein of unknown function XkdX Amet_1440 0d126e89ddbd9152e9c92c855bd3eb4e 195 SUPERFAMILY SSF53335 37 181 2.68E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_1440 0d126e89ddbd9152e9c92c855bd3eb4e 195 Gene3D G3DSA:3.40.50.150 18 189 2.7E-36 T 12-10-2018 Amet_1440 0d126e89ddbd9152e9c92c855bd3eb4e 195 Pfam PF13649 Methyltransferase domain 52 147 2.6E-19 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 Gene3D G3DSA:3.30.70.1430 38 809 1.6E-260 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 SUPERFAMILY SSF82714 181 263 1.44E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 SUPERFAMILY SSF82866 798 1017 4.84E-53 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 Gene3D G3DSA:3.30.2090.10 176 268 1.6E-260 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 Gene3D G3DSA:3.30.2090.10 709 801 1.6E-260 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 Pfam PF00873 AcrB/AcrD/AcrF family 1 1016 1.8E-183 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 Gene3D G3DSA:1.20.1640.10 10 507 1.6E-260 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 Gene3D G3DSA:3.30.70.1440 658 859 1.6E-260 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 Gene3D G3DSA:3.30.70.1320 133 326 1.6E-260 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 SUPERFAMILY SSF82714 711 798 2.49E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 SUPERFAMILY SSF82866 289 489 1.44E-36 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 SUPERFAMILY SSF82693 136 322 1.49E-8 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 SUPERFAMILY SSF82693 39 128 1.52E-16 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 Gene3D G3DSA:1.20.1640.10 510 1013 1.6E-260 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 Gene3D G3DSA:3.30.70.1430 564 657 1.6E-260 T 12-10-2018 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 8.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 8.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 8.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0363 a3d901ec6cf3a685a1e3f1d8041be6fd 1023 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 8.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_4625 1bac057bdeb52f9d3ab6f2a239716352 223 Gene3D G3DSA:3.60.15.10 1 222 1.2E-69 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_4625 1bac057bdeb52f9d3ab6f2a239716352 223 SMART SM00849 7 189 8.4E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_4625 1bac057bdeb52f9d3ab6f2a239716352 223 SUPERFAMILY SSF56281 1 214 4.72E-32 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_4625 1bac057bdeb52f9d3ab6f2a239716352 223 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 223 35.676 T 12-10-2018 IPR022877 Protein of unknown funcion UPF0173 Amet_4625 1bac057bdeb52f9d3ab6f2a239716352 223 Pfam PF12706 Beta-lactamase superfamily domain 33 190 2.2E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 SUPERFAMILY SSF109604 270 427 1.66E-29 T 12-10-2018 Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 SMART SM00471 287 393 1.8E-13 T 12-10-2018 IPR003607 HD/PDEase domain Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 Gene3D G3DSA:1.10.3210.10 273 426 1.0E-18 T 12-10-2018 Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 Pfam PF01966 HD domain 292 383 8.6E-18 T 12-10-2018 IPR006674 HD domain Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 SUPERFAMILY SSF54791 163 259 2.28E-17 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 TIGRFAM TIGR00277 HDIG: HDIG domain 287 364 5.4E-23 T 12-10-2018 IPR006675 HDIG domain Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 Pfam PF12072 Domain of unknown function (DUF3552) 2 160 2.2E-53 T 12-10-2018 IPR022711 Ribonuclease Y, N-terminal Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 SMART SM00322 163 230 1.4E-7 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 Hamap MF_00335 Ribonuclease Y [rny]. 1 475 24.7 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 2 475 4.3E-231 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 Gene3D G3DSA:3.30.1370.10 161 264 9.6E-9 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_2657 0d375adc492185bc66d0b59f8fc2d108 475 Pfam PF00013 KH domain 167 225 1.2E-6 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Amet_4715 60d46955bd01bf46cc9b4108d446009a 136 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 3 135 1.4E-25 T 12-10-2018 IPR030949 ECF transporter S component, folate family Amet_4715 60d46955bd01bf46cc9b4108d446009a 136 Pfam PF07155 ECF-type riboflavin transporter, S component 4 122 9.3E-14 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 Amet_4715 60d46955bd01bf46cc9b4108d446009a 136 Gene3D G3DSA:1.10.1760.20 1 136 6.1E-24 T 12-10-2018 Amet_0663 516386436b1b1890bf9772522953a0bb 587 SUPERFAMILY SSF55785 133 232 2.74E-11 T 12-10-2018 IPR035965 PAS domain superfamily Amet_0663 516386436b1b1890bf9772522953a0bb 587 Pfam PF00158 Sigma-54 interaction domain 275 441 1.3E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_0663 516386436b1b1890bf9772522953a0bb 587 Gene3D G3DSA:3.30.450.20 129 238 1.4E-17 T 12-10-2018 Amet_0663 516386436b1b1890bf9772522953a0bb 587 SMART SM00091 137 203 2.1E-7 T 12-10-2018 IPR000014 PAS domain Amet_0663 516386436b1b1890bf9772522953a0bb 587 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 487 496 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_0663 516386436b1b1890bf9772522953a0bb 587 SUPERFAMILY SSF54631 6 146 1.89E-25 T 12-10-2018 Amet_0663 516386436b1b1890bf9772522953a0bb 587 SUPERFAMILY SSF52540 274 518 7.3E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0663 516386436b1b1890bf9772522953a0bb 587 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 242 4.0E-6 T 12-10-2018 IPR000014 PAS domain Amet_0663 516386436b1b1890bf9772522953a0bb 587 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 360 375 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_0663 516386436b1b1890bf9772522953a0bb 587 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 298 311 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_0663 516386436b1b1890bf9772522953a0bb 587 Gene3D G3DSA:1.10.10.60 518 585 4.8E-15 T 12-10-2018 Amet_0663 516386436b1b1890bf9772522953a0bb 587 Pfam PF02954 Bacterial regulatory protein, Fis family 544 579 7.0E-11 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_0663 516386436b1b1890bf9772522953a0bb 587 SMART SM00382 294 437 1.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0663 516386436b1b1890bf9772522953a0bb 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 564 584 4.5E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_0663 516386436b1b1890bf9772522953a0bb 587 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 547 564 4.5E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_0663 516386436b1b1890bf9772522953a0bb 587 SMART SM00116 18 66 0.84 T 12-10-2018 IPR000644 CBS domain Amet_0663 516386436b1b1890bf9772522953a0bb 587 SMART SM00116 82 129 4.6E-5 T 12-10-2018 IPR000644 CBS domain Amet_0663 516386436b1b1890bf9772522953a0bb 587 Pfam PF00571 CBS domain 11 63 2.2E-8 T 12-10-2018 IPR000644 CBS domain Amet_0663 516386436b1b1890bf9772522953a0bb 587 Pfam PF00571 CBS domain 82 128 8.0E-7 T 12-10-2018 IPR000644 CBS domain Amet_0663 516386436b1b1890bf9772522953a0bb 587 Gene3D G3DSA:3.40.50.300 260 445 8.5E-63 T 12-10-2018 Amet_0663 516386436b1b1890bf9772522953a0bb 587 Pfam PF00989 PAS fold 141 197 7.0E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_0663 516386436b1b1890bf9772522953a0bb 587 SUPERFAMILY SSF46689 487 583 7.53E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0663 516386436b1b1890bf9772522953a0bb 587 Gene3D G3DSA:3.10.580.10 3 128 1.4E-23 T 12-10-2018 Amet_0663 516386436b1b1890bf9772522953a0bb 587 Gene3D G3DSA:1.10.8.60 446 517 1.4E-19 T 12-10-2018 Amet_0899 50c3c72b1e7ff9ea18f4cd45d9099bf3 519 SUPERFAMILY SSF51126 77 465 1.1E-91 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor Amet_0899 50c3c72b1e7ff9ea18f4cd45d9099bf3 519 Gene3D G3DSA:2.160.20.10 62 471 5.3E-116 T 12-10-2018 IPR012334 Pectin lyase fold Amet_0899 50c3c72b1e7ff9ea18f4cd45d9099bf3 519 ProSitePatterns PS00502 Polygalacturonase active site. 323 337 - T 12-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 Amet_0899 50c3c72b1e7ff9ea18f4cd45d9099bf3 519 Pfam PF00295 Glycosyl hydrolases family 28 136 398 5.4E-43 T 12-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 Amet_0899 50c3c72b1e7ff9ea18f4cd45d9099bf3 519 SMART SM00710 491 513 3300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Amet_0899 50c3c72b1e7ff9ea18f4cd45d9099bf3 519 SMART SM00710 343 364 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Amet_0899 50c3c72b1e7ff9ea18f4cd45d9099bf3 519 SMART SM00710 282 303 150.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Amet_0899 50c3c72b1e7ff9ea18f4cd45d9099bf3 519 SMART SM00710 316 337 41.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Amet_0899 50c3c72b1e7ff9ea18f4cd45d9099bf3 519 SMART SM00710 255 281 1600.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat Amet_2654 c1ba72f31f8cdf749d2c463775bb0b54 125 Pfam PF03551 Transcriptional regulator PadR-like family 26 96 2.7E-17 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amet_2654 c1ba72f31f8cdf749d2c463775bb0b54 125 SUPERFAMILY SSF46785 16 103 1.42E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2654 c1ba72f31f8cdf749d2c463775bb0b54 125 Gene3D G3DSA:1.10.10.10 4 123 6.8E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2654 c1ba72f31f8cdf749d2c463775bb0b54 125 ProDom PD077583 REPLICATION TRANSCRIPTION DNA-BINDING TERMINATOR REGULATION TERMINATION 3D-STRUCTURE 16 121 6.0E-4 T 12-10-2018 IPR003432 Replication terminator protein GO:0003677|GO:0006274 Amet_4479 2b60e43fd0b2617496963727a357c8af 104 SUPERFAMILY SSF54999 7 104 9.42E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Amet_4479 2b60e43fd0b2617496963727a357c8af 104 PRINTS PR00971 Ribosomal protein S10 family signature 7 20 2.8E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4479 2b60e43fd0b2617496963727a357c8af 104 PRINTS PR00971 Ribosomal protein S10 family signature 42 57 2.8E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4479 2b60e43fd0b2617496963727a357c8af 104 PRINTS PR00971 Ribosomal protein S10 family signature 63 77 2.8E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4479 2b60e43fd0b2617496963727a357c8af 104 Pfam PF00338 Ribosomal protein S10p/S20e 9 103 1.8E-35 T 12-10-2018 IPR027486 Ribosomal protein S10 domain Amet_4479 2b60e43fd0b2617496963727a357c8af 104 SMART SM01403 9 103 6.3E-58 T 12-10-2018 IPR027486 Ribosomal protein S10 domain Amet_4479 2b60e43fd0b2617496963727a357c8af 104 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 6 103 2.1E-44 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4479 2b60e43fd0b2617496963727a357c8af 104 Gene3D G3DSA:3.30.70.600 3 104 9.1E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Amet_4479 2b60e43fd0b2617496963727a357c8af 104 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 5 104 26.858 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4479 2b60e43fd0b2617496963727a357c8af 104 ProSitePatterns PS00361 Ribosomal protein S10 signature. 31 46 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2206 315e5318eb93fde240812caf31afd331 392 SUPERFAMILY SSF52402 174 381 1.26E-51 T 12-10-2018 Amet_2206 315e5318eb93fde240812caf31afd331 392 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 5 371 3.8E-116 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 Amet_2206 315e5318eb93fde240812caf31afd331 392 Gene3D G3DSA:3.30.2130.30 1 174 1.0E-56 T 12-10-2018 Amet_2206 315e5318eb93fde240812caf31afd331 392 Gene3D G3DSA:3.40.50.620 175 392 3.3E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_2206 315e5318eb93fde240812caf31afd331 392 Pfam PF02926 THUMP domain 39 157 4.4E-17 T 12-10-2018 IPR004114 THUMP domain GO:0003723 Amet_2206 315e5318eb93fde240812caf31afd331 392 SUPERFAMILY SSF143437 3 173 6.15E-50 T 12-10-2018 Amet_2206 315e5318eb93fde240812caf31afd331 392 SMART SM00981 73 165 1.5E-23 T 12-10-2018 IPR004114 THUMP domain GO:0003723 Amet_2206 315e5318eb93fde240812caf31afd331 392 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 367 2.3E-68 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 Amet_2206 315e5318eb93fde240812caf31afd331 392 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 392 151.142 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 Amet_2792 be982dbd57d8ab19c539a03890937353 293 Pfam PF03755 YicC-like family, N-terminal region 2 156 1.3E-42 T 12-10-2018 IPR013527 YicC-like, N-terminal Amet_2792 be982dbd57d8ab19c539a03890937353 293 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 293 7.6E-80 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Amet_2792 be982dbd57d8ab19c539a03890937353 293 Pfam PF08340 Domain of unknown function (DUF1732) 209 293 1.1E-37 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 Amet_2704 48eb4db1d901153728e7652424d29621 361 Gene3D G3DSA:3.40.1690.10 225 361 6.2E-57 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Amet_2704 48eb4db1d901153728e7652424d29621 361 SUPERFAMILY SSF160544 251 358 9.81E-41 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Amet_2704 48eb4db1d901153728e7652424d29621 361 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 12 360 2.3E-125 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Amet_2704 48eb4db1d901153728e7652424d29621 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 309 330 3.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amet_2704 48eb4db1d901153728e7652424d29621 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 235 252 3.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amet_2704 48eb4db1d901153728e7652424d29621 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 215 233 3.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amet_2704 48eb4db1d901153728e7652424d29621 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 279 294 3.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amet_2704 48eb4db1d901153728e7652424d29621 361 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 15 37 3.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amet_2704 48eb4db1d901153728e7652424d29621 361 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 354 5.5E-129 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amet_0066 b411958eaea67196b9e63ba2b2ddcb02 173 Gene3D G3DSA:1.10.1760.20 2 167 1.7E-19 T 12-10-2018 Amet_0066 b411958eaea67196b9e63ba2b2ddcb02 173 Pfam PF12822 ECF transporter, substrate-specific component 13 164 1.3E-11 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Amet_1650 9d6366fd9758caa4cc7d36c84f80adf1 409 SUPERFAMILY SSF53383 1 407 3.81E-90 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_1650 9d6366fd9758caa4cc7d36c84f80adf1 409 Pfam PF00266 Aminotransferase class-V 20 398 7.4E-98 T 12-10-2018 IPR000192 Aminotransferase class V domain Amet_1650 9d6366fd9758caa4cc7d36c84f80adf1 409 Gene3D G3DSA:3.90.1150.10 6 400 6.7E-118 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_1650 9d6366fd9758caa4cc7d36c84f80adf1 409 Gene3D G3DSA:3.40.640.10 31 298 6.7E-118 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_4619 06db924f208195c52b3a75abd1479363 209 Gene3D G3DSA:3.90.1010.20 70 127 1.5E-5 T 12-10-2018 Amet_4619 06db924f208195c52b3a75abd1479363 209 SMART SM00900 47 121 8.0E-18 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_4619 06db924f208195c52b3a75abd1479363 209 SMART SM00900 137 209 1.3E-14 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_4619 06db924f208195c52b3a75abd1479363 209 Pfam PF04205 FMN-binding domain 137 209 4.3E-16 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_4619 06db924f208195c52b3a75abd1479363 209 Pfam PF04205 FMN-binding domain 47 118 1.8E-16 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_4701 0754e905bf1c9a12fb2e7339cbef6807 52 Pfam PF03746 LamB/YcsF family 1 35 1.1E-6 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Amet_4701 0754e905bf1c9a12fb2e7339cbef6807 52 SUPERFAMILY SSF88713 1 35 2.37E-5 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amet_4701 0754e905bf1c9a12fb2e7339cbef6807 52 Gene3D G3DSA:3.20.20.370 1 48 2.9E-6 T 12-10-2018 Amet_4722 8621356a1bd981761794480b3d52298f 533 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 36 529 7.0E-187 T 12-10-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 Amet_4722 8621356a1bd981761794480b3d52298f 533 SUPERFAMILY SSF53850 40 525 4.52E-112 T 12-10-2018 Amet_4722 8621356a1bd981761794480b3d52298f 533 Gene3D G3DSA:3.10.105.10 277 499 1.7E-139 T 12-10-2018 Amet_4722 8621356a1bd981761794480b3d52298f 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 444 1.4E-80 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_4722 8621356a1bd981761794480b3d52298f 533 Gene3D G3DSA:3.40.190.10 61 276 1.7E-139 T 12-10-2018 Amet_4722 8621356a1bd981761794480b3d52298f 533 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 105 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site Amet_4722 8621356a1bd981761794480b3d52298f 533 PIRSF PIRSF002741 1 533 1.5E-89 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_0551 e5ef19c35e288c50a67557dc16e31436 171 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 149 9.2E-33 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Amet_0190 976cbfc3ecec38ef94a1724b852c4f76 754 Pfam PF00932 Lamin Tail Domain 33 141 2.7E-16 T 12-10-2018 IPR001322 Lamin tail domain Amet_0190 976cbfc3ecec38ef94a1724b852c4f76 754 Pfam PF08757 CotH kinase protein 399 737 5.5E-80 T 12-10-2018 IPR014867 Spore coat protein CotH Amet_0190 976cbfc3ecec38ef94a1724b852c4f76 754 Pfam PF13287 Fn3 associated 203 311 1.2E-12 T 12-10-2018 IPR026876 Fn3 associated repeat Amet_0190 976cbfc3ecec38ef94a1724b852c4f76 754 SUPERFAMILY SSF74853 34 135 1.16E-11 T 12-10-2018 IPR036415 Lamin tail domain superfamily Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 Gene3D G3DSA:3.30.300.10 96 374 4.5E-149 T 12-10-2018 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 PIRSF PIRSF000497 1 384 4.6E-157 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 233 1.6E-38 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 SUPERFAMILY SSF55973 236 380 9.42E-62 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 381 1.0E-142 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 371 1.4E-61 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 80 2.8E-27 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 SUPERFAMILY SSF55973 114 234 6.62E-44 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 Gene3D G3DSA:3.30.300.10 11 273 4.5E-149 T 12-10-2018 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 383 47.286 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 Gene3D G3DSA:3.30.300.10 7 236 4.5E-149 T 12-10-2018 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 118 128 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_4040 45cee986d52f2d226e6238333f0b19d8 393 SUPERFAMILY SSF55973 4 102 1.92E-32 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 SMART SM00846 3 154 2.4E-84 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 SUPERFAMILY SSF55347 154 316 3.12E-71 T 12-10-2018 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 7.5E-135 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 2.6E-69 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 SUPERFAMILY SSF51735 4 170 1.74E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3679 eabd7f546852b1652c79f13383734f3b 337 Gene3D G3DSA:3.30.360.10 153 317 2.1E-150 T 12-10-2018 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 PIRSF PIRSF000149 1 336 2.1E-137 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 9.3E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 9.3E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 9.3E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 9.3E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 9.3E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 103 2.8E-34 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3679 eabd7f546852b1652c79f13383734f3b 337 Gene3D G3DSA:3.40.50.720 4 330 2.1E-150 T 12-10-2018 Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 Gene3D G3DSA:3.40.50.720 29 237 2.2E-73 T 12-10-2018 Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 SUPERFAMILY SSF51735 2 239 9.08E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 PIRSF PIRSF000161 1 240 1.4E-72 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 SUPERFAMILY SSF55347 103 209 1.11E-26 T 12-10-2018 Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 238 29.508 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 104 237 4.1E-40 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 101 1.1E-20 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 40 238 1.8E-61 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 126 143 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_3196 56b5d0f96618f7e062da82a8c5f1f7b0 240 Gene3D G3DSA:3.30.360.10 103 207 2.2E-73 T 12-10-2018 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 Gene3D G3DSA:3.30.420.40 5 354 6.8E-148 T 12-10-2018 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 PIRSF PIRSF036458 1 355 9.8E-155 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 Hamap MF_00542 Probable butyrate kinase [buk]. 1 362 158.253 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 Pfam PF00871 Acetokinase family 5 345 8.3E-65 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 5 352 3.7E-156 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 Gene3D G3DSA:3.30.420.40 137 331 6.8E-148 T 12-10-2018 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 SUPERFAMILY SSF53067 4 173 6.66E-66 T 12-10-2018 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 PRINTS PR00471 Acetate kinase family signature 273 286 6.2E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 PRINTS PR00471 Acetate kinase family signature 179 200 6.2E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 PRINTS PR00471 Acetate kinase family signature 296 312 6.2E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 PRINTS PR00471 Acetate kinase family signature 5 16 6.2E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4310 f8fe539ae296b05f1d5ce548ee6e1735 362 SUPERFAMILY SSF53067 121 346 2.44E-51 T 12-10-2018 Amet_4269 2811d575be6095a9ebd9eee880e7a100 623 Gene3D G3DSA:3.40.930.10 478 619 6.5E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Amet_4269 2811d575be6095a9ebd9eee880e7a100 623 Pfam PF02378 Phosphotransferase system, EIIC 29 287 1.1E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Amet_4269 2811d575be6095a9ebd9eee880e7a100 623 SUPERFAMILY SSF52794 378 463 1.18E-22 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Amet_4269 2811d575be6095a9ebd9eee880e7a100 623 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 378 459 1.8E-11 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Amet_4269 2811d575be6095a9ebd9eee880e7a100 623 SUPERFAMILY SSF55804 482 618 2.09E-36 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Amet_4269 2811d575be6095a9ebd9eee880e7a100 623 Gene3D G3DSA:3.40.50.2300 368 468 7.3E-31 T 12-10-2018 Amet_4269 2811d575be6095a9ebd9eee880e7a100 623 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 19 352 2.7E-162 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 Amet_4269 2811d575be6095a9ebd9eee880e7a100 623 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 527 543 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain Amet_4269 2811d575be6095a9ebd9eee880e7a100 623 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 483 616 2.3E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Amet_2867 09aeb4bcf192f9ef1ef0464a584aa194 265 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 37 264 2.7E-58 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Amet_2867 09aeb4bcf192f9ef1ef0464a584aa194 265 SUPERFAMILY SSF64438 9 264 1.45E-81 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Amet_2867 09aeb4bcf192f9ef1ef0464a584aa194 265 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 30 262 2.7E-75 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Amet_2867 09aeb4bcf192f9ef1ef0464a584aa194 265 Gene3D G3DSA:3.60.140.10 3 265 2.7E-89 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Amet_4120 d2d69d3a7182d532c08df64382ddcdad 168 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 23 163 6.6E-27 T 12-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 SMART SM00919 187 410 4.0E-125 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 PIRSF PIRSF000106 27 417 1.4E-86 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 PRINTS PR00072 Malic enzyme signature 214 230 1.0E-9 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 PRINTS PR00072 Malic enzyme signature 104 126 1.0E-9 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 PRINTS PR00072 Malic enzyme signature 183 199 1.0E-9 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 Pfam PF00390 Malic enzyme, N-terminal domain 44 175 1.8E-32 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 Gene3D G3DSA:3.40.50.720 185 417 3.6E-84 T 12-10-2018 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 SUPERFAMILY SSF51735 187 416 2.71E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 Pfam PF03949 Malic enzyme, NAD binding domain 189 410 7.4E-24 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 SMART SM01274 42 175 8.4E-89 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 SUPERFAMILY SSF53223 34 185 9.35E-59 T 12-10-2018 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 ProSitePatterns PS00331 Malic enzymes signature. 183 199 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Amet_2965 4cdf47d5c94bca221131b85be0ab387d 417 Gene3D G3DSA:3.40.50.10380 21 184 2.0E-78 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Amet_2386 070ae6c65c76dade5c78da3860d89768 184 Pfam PF06114 IrrE N-terminal-like domain 48 158 2.8E-10 T 12-10-2018 IPR010359 IrrE N-terminal-like domain Amet_0258 039105579dabee68d805a7de7f0f66c0 206 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 8.0E-31 T 12-10-2018 Amet_0258 039105579dabee68d805a7de7f0f66c0 206 Pfam PF00936 BMC domain 5 80 1.8E-24 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0258 039105579dabee68d805a7de7f0f66c0 206 Gene3D G3DSA:3.30.70.1710 1 106 2.7E-32 T 12-10-2018 Amet_0258 039105579dabee68d805a7de7f0f66c0 206 SMART SM00877 4 80 5.3E-33 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0258 039105579dabee68d805a7de7f0f66c0 206 SUPERFAMILY SSF143414 4 95 8.76E-27 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_3584 b42a211b43a0002ac3d39cc44c03d6dd 369 Pfam PF02653 Branched-chain amino acid transport system / permease component 74 349 1.4E-42 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 PRINTS PR00046 Major sigma-70 factor signature 49 62 4.0E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 PRINTS PR00046 Major sigma-70 factor signature 193 205 4.0E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 PRINTS PR00046 Major sigma-70 factor signature 210 225 4.0E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 PRINTS PR00046 Major sigma-70 factor signature 225 236 4.0E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 SUPERFAMILY SSF88659 160 240 5.61E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 Gene3D G3DSA:1.20.140.160 93 242 6.3E-46 T 12-10-2018 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 49 62 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 Pfam PF04542 Sigma-70 region 2 22 94 1.8E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 Pfam PF04545 Sigma-70, region 4 190 237 2.7E-18 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 SUPERFAMILY SSF88946 4 94 1.32E-27 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 22 240 1.1E-79 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 PIRSF PIRSF000770 2 241 3.5E-49 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 237 8.0E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 Gene3D G3DSA:1.10.1740.10 7 92 1.0E-31 T 12-10-2018 Amet_2694 54d1999a703bf35a203afe2f7da81f41 243 SUPERFAMILY SSF88659 95 161 1.13E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2813 1cb6e56cdbeb5bb8bad20a82de075c3f 515 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2813 1cb6e56cdbeb5bb8bad20a82de075c3f 515 SUPERFAMILY SSF52540 246 496 2.46E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2813 1cb6e56cdbeb5bb8bad20a82de075c3f 515 Pfam PF00005 ABC transporter 21 172 1.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2813 1cb6e56cdbeb5bb8bad20a82de075c3f 515 Pfam PF00005 ABC transporter 280 434 4.2E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2813 1cb6e56cdbeb5bb8bad20a82de075c3f 515 Gene3D G3DSA:3.40.50.300 250 510 1.1E-43 T 12-10-2018 Amet_2813 1cb6e56cdbeb5bb8bad20a82de075c3f 515 SMART SM00382 288 483 9.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2813 1cb6e56cdbeb5bb8bad20a82de075c3f 515 SMART SM00382 30 220 4.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2813 1cb6e56cdbeb5bb8bad20a82de075c3f 515 Gene3D G3DSA:3.40.50.300 2 242 3.0E-56 T 12-10-2018 Amet_2813 1cb6e56cdbeb5bb8bad20a82de075c3f 515 SUPERFAMILY SSF52540 4 235 1.09E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 SUPERFAMILY SSF52540 222 535 2.17E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 SMART SM00487 211 415 5.7E-5 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 Pfam PF01966 HD domain 19 115 8.1E-9 T 12-10-2018 IPR006674 HD domain Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 15 183 3.2E-25 T 12-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 231 551 3.1E-69 T 12-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 Gene3D G3DSA:3.40.50.300 194 400 6.0E-10 T 12-10-2018 Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 SUPERFAMILY SSF109604 19 115 2.08E-10 T 12-10-2018 Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 Pfam PF00271 Helicase conserved C-terminal domain 433 533 1.9E-5 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 Gene3D G3DSA:1.10.3210.30 2 183 1.3E-14 T 12-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Amet_2193 8e48636e851579ff7d939c0ce2520a80 743 Gene3D G3DSA:3.40.50.300 401 555 6.7E-12 T 12-10-2018 Amet_3934 c0951c8615bf0e8921da2153662bff48 416 Pfam PF00141 Peroxidase 93 390 5.4E-42 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_3934 c0951c8615bf0e8921da2153662bff48 416 Gene3D G3DSA:1.10.420.10 270 391 3.0E-150 T 12-10-2018 Amet_3934 c0951c8615bf0e8921da2153662bff48 416 SUPERFAMILY SSF48113 68 118 1.94E-12 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_3934 c0951c8615bf0e8921da2153662bff48 416 Gene3D G3DSA:1.10.420.20 68 86 1.5E-21 T 12-10-2018 Amet_3934 c0951c8615bf0e8921da2153662bff48 416 Gene3D G3DSA:1.10.520.10 87 119 1.5E-21 T 12-10-2018 Amet_3934 c0951c8615bf0e8921da2153662bff48 416 SUPERFAMILY SSF48113 124 415 8.97E-112 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_3934 c0951c8615bf0e8921da2153662bff48 416 Gene3D G3DSA:1.10.520.10 120 415 3.0E-150 T 12-10-2018 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 294 320 1.5E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 181 201 1.5E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 43 61 1.5E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 126 145 1.5E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 63 86 1.5E-60 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 Gene3D G3DSA:3.30.420.40 148 311 8.3E-132 T 12-10-2018 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 Gene3D G3DSA:3.30.420.40 8 321 8.3E-132 T 12-10-2018 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 SUPERFAMILY SSF53067 5 142 1.17E-42 T 12-10-2018 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 Pfam PF06723 MreB/Mbl protein 6 329 2.5E-148 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 Gene3D G3DSA:3.90.640.10 180 253 8.3E-132 T 12-10-2018 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 4 329 1.7E-149 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Amet_0365 4ed1e9ed8a7c8bcefa0fa91cbed68a94 341 SUPERFAMILY SSF53067 148 324 2.43E-48 T 12-10-2018 Amet_2958 a73b42383ae921e48a6967649954a3e7 345 Pfam PF00583 Acetyltransferase (GNAT) family 25 108 4.3E-7 T 12-10-2018 IPR000182 GNAT domain Amet_2958 a73b42383ae921e48a6967649954a3e7 345 SUPERFAMILY SSF52374 148 328 1.03E-20 T 12-10-2018 Amet_2958 a73b42383ae921e48a6967649954a3e7 345 PIRSF PIRSF005751 1 344 4.8E-117 T 12-10-2018 IPR005216 Citrate lyase ligase GO:0008771 Amet_2958 a73b42383ae921e48a6967649954a3e7 345 SUPERFAMILY SSF55729 18 112 1.77E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2958 a73b42383ae921e48a6967649954a3e7 345 Gene3D G3DSA:3.40.630.30 6 120 2.6E-11 T 12-10-2018 Amet_2958 a73b42383ae921e48a6967649954a3e7 345 Gene3D G3DSA:3.40.50.620 148 342 5.5E-18 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_2958 a73b42383ae921e48a6967649954a3e7 345 SMART SM00764 145 326 4.8E-97 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 Amet_2958 a73b42383ae921e48a6967649954a3e7 345 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 9 328 4.5E-92 T 12-10-2018 IPR005216 Citrate lyase ligase GO:0008771 Amet_2958 a73b42383ae921e48a6967649954a3e7 345 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 115 327 3.0E-112 T 12-10-2018 Amet_2958 a73b42383ae921e48a6967649954a3e7 345 Pfam PF08218 Citrate lyase ligase C-terminal domain 146 326 6.9E-71 T 12-10-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 Amet_2284 496912020a8b530153874f7db6318337 196 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 8 196 1.3E-86 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Amet_2284 496912020a8b530153874f7db6318337 196 Pfam PF02508 Rnf-Nqr subunit, membrane protein 10 195 2.5E-61 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Amet_2284 496912020a8b530153874f7db6318337 196 PIRSF PIRSF006102 5 196 8.5E-59 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Amet_2284 496912020a8b530153874f7db6318337 196 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 7 196 26.121 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 Pfam PF07498 Rho termination factor, N-terminal domain 5 39 2.6E-10 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 216 420 1.0E-20 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 SMART SM00959 5 47 4.5E-9 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 SMART SM00357 114 178 2.0E-15 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 Gene3D G3DSA:3.40.50.300 191 474 1.0E-125 T 12-10-2018 Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 SUPERFAMILY SSF68912 3 40 9.81E-6 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 SUPERFAMILY SSF52540 151 428 2.35E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 TIGRFAM TIGR00767 rho: transcription termination factor Rho 3 474 2.4E-189 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 Pfam PF07497 Rho termination factor, RNA-binding domain 114 185 5.1E-30 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 476 195.932 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 SUPERFAMILY SSF50249 113 185 3.73E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_0323 a5e00391a03ecf1a89581db7941161d2 477 SMART SM00382 227 412 5.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2944 f13515e7cb5bc74c174f6c4d78b399b4 631 Gene3D G3DSA:3.20.20.80 130 541 1.5E-131 T 12-10-2018 Amet_2944 f13515e7cb5bc74c174f6c4d78b399b4 631 SUPERFAMILY SSF81296 5 102 5.6E-8 T 12-10-2018 IPR014756 Immunoglobulin E-set Amet_2944 f13515e7cb5bc74c174f6c4d78b399b4 631 Gene3D G3DSA:2.60.40.10 1 109 2.1E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_2944 f13515e7cb5bc74c174f6c4d78b399b4 631 Gene3D G3DSA:2.60.40.1180 542 628 6.0E-5 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta Amet_2944 f13515e7cb5bc74c174f6c4d78b399b4 631 SMART SM00642 142 539 2.2E-77 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amet_2944 f13515e7cb5bc74c174f6c4d78b399b4 631 Pfam PF00128 Alpha amylase, catalytic domain 193 513 7.6E-66 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Amet_2944 f13515e7cb5bc74c174f6c4d78b399b4 631 SUPERFAMILY SSF51445 129 548 1.29E-94 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_2944 f13515e7cb5bc74c174f6c4d78b399b4 631 SUPERFAMILY SSF51011 548 630 8.16E-9 T 12-10-2018 Amet_1915 72b3ebca5a47f00c8a1c78b111be7600 224 SUPERFAMILY SSF52172 2 176 7.26E-45 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1915 72b3ebca5a47f00c8a1c78b111be7600 224 Gene3D G3DSA:1.10.10.10 129 224 2.3E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1915 72b3ebca5a47f00c8a1c78b111be7600 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 6.1E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1915 72b3ebca5a47f00c8a1c78b111be7600 224 SMART SM00448 2 112 9.8E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1915 72b3ebca5a47f00c8a1c78b111be7600 224 SMART SM00862 146 219 1.8E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1915 72b3ebca5a47f00c8a1c78b111be7600 224 Gene3D G3DSA:3.40.50.2300 1 128 1.8E-39 T 12-10-2018 Amet_1915 72b3ebca5a47f00c8a1c78b111be7600 224 Pfam PF00072 Response regulator receiver domain 4 112 1.6E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2504 79850ec7724d115ba73a847b1fad59e1 75 Gene3D G3DSA:1.10.287.1040 2 74 1.4E-20 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Amet_2504 79850ec7724d115ba73a847b1fad59e1 75 SUPERFAMILY SSF116842 3 66 3.79E-19 T 12-10-2018 Amet_2504 79850ec7724d115ba73a847b1fad59e1 75 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 5 61 1.1E-19 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amet_2504 79850ec7724d115ba73a847b1fad59e1 75 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 5 65 14.034 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amet_2504 79850ec7724d115ba73a847b1fad59e1 75 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 40 5.0E-14 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amet_2504 79850ec7724d115ba73a847b1fad59e1 75 Pfam PF02609 Exonuclease VII small subunit 6 56 4.2E-19 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amet_2504 79850ec7724d115ba73a847b1fad59e1 75 PIRSF PIRSF006488 1 75 1.5E-17 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Amet_1779 b8126c5a0048f11b13df18781aff7af0 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1779 b8126c5a0048f11b13df18781aff7af0 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1779 b8126c5a0048f11b13df18781aff7af0 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 1.2E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1779 b8126c5a0048f11b13df18781aff7af0 190 SUPERFAMILY SSF46689 2 80 5.49E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1779 b8126c5a0048f11b13df18781aff7af0 190 Gene3D G3DSA:1.10.357.10 1 190 3.6E-50 T 12-10-2018 Amet_1779 b8126c5a0048f11b13df18781aff7af0 190 SUPERFAMILY SSF48498 85 187 8.23E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_3643 8366b93d05eee5c6bb1ff36967a4a1c5 574 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 311 509 2.6E-11 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Amet_3643 8366b93d05eee5c6bb1ff36967a4a1c5 574 Gene3D G3DSA:3.30.980.10 91 227 5.2E-23 T 12-10-2018 Amet_3643 8366b93d05eee5c6bb1ff36967a4a1c5 574 Gene3D G3DSA:3.40.50.300 248 519 7.7E-60 T 12-10-2018 Amet_3643 8366b93d05eee5c6bb1ff36967a4a1c5 574 SUPERFAMILY SSF52540 298 507 1.87E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3643 8366b93d05eee5c6bb1ff36967a4a1c5 574 SUPERFAMILY SSF55186 92 257 4.01E-27 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Amet_3365 c0977a2d93f2dc92ed89442f495b640e 130 PIRSF PIRSF018297 3 130 8.7E-38 T 12-10-2018 IPR006440 Death on curing protein GO:0016301 Amet_3365 c0977a2d93f2dc92ed89442f495b640e 130 SUPERFAMILY SSF140931 37 126 3.66E-12 T 12-10-2018 IPR036597 Fido-like domain superfamily Amet_3365 c0977a2d93f2dc92ed89442f495b640e 130 Pfam PF02661 Fic/DOC family 9 88 2.0E-12 T 12-10-2018 IPR003812 Fido domain Amet_3365 c0977a2d93f2dc92ed89442f495b640e 130 Gene3D G3DSA:1.20.120.1870 5 130 3.6E-38 T 12-10-2018 Amet_3365 c0977a2d93f2dc92ed89442f495b640e 130 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 12 124 2.6E-20 T 12-10-2018 IPR006440 Death on curing protein GO:0016301 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 Gene3D G3DSA:3.40.1190.10 99 333 4.2E-81 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 Pfam PF08245 Mur ligase middle domain 108 308 5.5E-53 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 481 2.7E-161 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 482 34.049 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 Gene3D G3DSA:3.90.190.20 338 492 1.5E-57 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 SUPERFAMILY SSF63418 10 97 4.97E-24 T 12-10-2018 IPR035911 MurE/MurF, N-terminal Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 Pfam PF01225 Mur ligase family, catalytic domain 23 96 2.8E-12 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 SUPERFAMILY SSF53244 329 482 1.7E-45 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 Gene3D G3DSA:3.40.1390.10 1 97 4.3E-29 T 12-10-2018 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 411 4.2E-21 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amet_2884 84512c838d2c6f2d0af4bb83ed923547 494 SUPERFAMILY SSF53623 99 328 5.76E-71 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_3079 eb8e5311825c3a67fdd205f1112dbbdf 224 SMART SM00382 33 221 3.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3079 eb8e5311825c3a67fdd205f1112dbbdf 224 Pfam PF00005 ABC transporter 24 172 1.2E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3079 eb8e5311825c3a67fdd205f1112dbbdf 224 Gene3D G3DSA:3.40.50.300 3 224 3.1E-69 T 12-10-2018 Amet_3079 eb8e5311825c3a67fdd205f1112dbbdf 224 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3079 eb8e5311825c3a67fdd205f1112dbbdf 224 SUPERFAMILY SSF52540 4 224 8.78E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2751 c09b43cbf9b4a570b6acb30e864bbffa 347 Pfam PF04055 Radical SAM superfamily 13 181 4.4E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_2751 c09b43cbf9b4a570b6acb30e864bbffa 347 Gene3D G3DSA:3.80.30.20 3 244 1.7E-28 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_2751 c09b43cbf9b4a570b6acb30e864bbffa 347 SUPERFAMILY SSF102114 8 262 1.28E-55 T 12-10-2018 Amet_2751 c09b43cbf9b4a570b6acb30e864bbffa 347 SMART SM00729 7 225 7.1E-39 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_2751 c09b43cbf9b4a570b6acb30e864bbffa 347 Pfam PF16199 Radical_SAM C-terminal domain 186 271 3.8E-21 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Amet_2758 0be483dabe1265e6a3fe54b1ee5f0c8c 337 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 188 1.1E-30 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amet_2758 0be483dabe1265e6a3fe54b1ee5f0c8c 337 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 240 329 7.3E-37 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amet_2758 0be483dabe1265e6a3fe54b1ee5f0c8c 337 SUPERFAMILY SSF53901 7 330 2.71E-74 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_2758 0be483dabe1265e6a3fe54b1ee5f0c8c 337 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 329 72.922 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amet_2758 0be483dabe1265e6a3fe54b1ee5f0c8c 337 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 7 329 1.7E-131 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amet_2758 0be483dabe1265e6a3fe54b1ee5f0c8c 337 Gene3D G3DSA:3.40.47.10 4 336 1.7E-142 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_4550 35a7ad2f786451c4598b13e0ea56f4a4 549 Gene3D G3DSA:3.40.50.300 300 548 1.5E-54 T 12-10-2018 Amet_4550 35a7ad2f786451c4598b13e0ea56f4a4 549 SMART SM00533 11 323 1.9E-4 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Amet_4550 35a7ad2f786451c4598b13e0ea56f4a4 549 SMART SM00534 340 543 8.5E-23 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_4550 35a7ad2f786451c4598b13e0ea56f4a4 549 SUPERFAMILY SSF48334 47 298 7.06E-10 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Amet_4550 35a7ad2f786451c4598b13e0ea56f4a4 549 Pfam PF00488 MutS domain V 344 494 3.1E-30 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_4550 35a7ad2f786451c4598b13e0ea56f4a4 549 SUPERFAMILY SSF52540 300 467 1.34E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 Gene3D G3DSA:3.40.50.300 265 457 1.9E-48 T 12-10-2018 Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 SUPERFAMILY SSF52540 287 697 1.59E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 Pfam PF04851 Type III restriction enzyme, res subunit 284 437 1.9E-15 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 25 707 1.4E-152 T 12-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 SUPERFAMILY SSF52540 177 453 2.05E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 Pfam PF11867 Domain of unknown function (DUF3387) 732 1031 3.9E-10 T 12-10-2018 IPR021810 Protein of unknown function DUF3387 Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 Gene3D G3DSA:3.90.1570.50 70 264 1.0E-19 T 12-10-2018 Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 Gene3D G3DSA:3.40.50.300 461 710 1.3E-39 T 12-10-2018 Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 SMART SM00487 263 466 0.0026 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_4056 f39d18aaef139814e62350bba14fb51c 1041 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 42 197 2.3E-27 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 Gene3D G3DSA:1.10.3930.10 70 154 1.0E-159 T 12-10-2018 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 Hamap MF_00242 Arginine deiminase [arcA]. 3 406 42.925 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 Gene3D G3DSA:3.75.10.10 7 401 1.0E-159 T 12-10-2018 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 PRINTS PR01466 Bacterial arginine deiminase signature 154 172 6.0E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 PRINTS PR01466 Bacterial arginine deiminase signature 182 197 6.0E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 6.0E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 PRINTS PR01466 Bacterial arginine deiminase signature 4 24 6.0E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 6.0E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 6.0E-52 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 PIRSF PIRSF006356 1 406 2.5E-153 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 TIGRFAM TIGR01078 arcA: arginine deiminase 6 405 1.8E-149 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 Pfam PF02274 Amidinotransferase 20 403 3.3E-98 T 12-10-2018 Amet_4609 03fcb9638de9f7c4316506878f79c490 406 SUPERFAMILY SSF55909 6 405 2.16E-121 T 12-10-2018 Amet_0932 a6e67d1ab8ed43d460f861d7d1b4da95 265 Pfam PF00005 ABC transporter 21 169 2.0E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0932 a6e67d1ab8ed43d460f861d7d1b4da95 265 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0932 a6e67d1ab8ed43d460f861d7d1b4da95 265 Gene3D G3DSA:3.40.50.300 1 259 2.1E-84 T 12-10-2018 Amet_0932 a6e67d1ab8ed43d460f861d7d1b4da95 265 SUPERFAMILY SSF52540 1 239 1.22E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0932 a6e67d1ab8ed43d460f861d7d1b4da95 265 SMART SM00382 30 226 9.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 446 9.8E-36 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PIRSF PIRSF000350 1 452 1.3E-94 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 SUPERFAMILY SSF51905 1 328 5.18E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 2.4E-35 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.4E-35 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 2.4E-35 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 2.4E-35 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.4E-35 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 SUPERFAMILY SSF55424 334 456 3.61E-41 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 Gene3D G3DSA:3.50.50.60 3 323 1.9E-103 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 5.2E-69 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 37 47 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 1.9E-66 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 1.9E-66 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 1.9E-66 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.9E-66 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 1.9E-66 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 1.9E-66 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.9E-66 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 1.9E-66 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 1.9E-66 T 12-10-2018 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 Gene3D G3DSA:3.30.390.30 337 457 6.5E-45 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 457 4.6E-162 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Amet_1254 715cfbc3582673169ecf32f42bbd596e 457 Gene3D G3DSA:3.50.50.60 144 265 1.9E-103 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1082 3bcbab7142bca38df90b4c98a1070801 400 SUPERFAMILY SSF53686 8 391 1.44E-150 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_1082 3bcbab7142bca38df90b4c98a1070801 400 Gene3D G3DSA:3.40.50.1100 56 386 1.3E-191 T 12-10-2018 Amet_1082 3bcbab7142bca38df90b4c98a1070801 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 10 391 6.0E-200 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amet_1082 3bcbab7142bca38df90b4c98a1070801 400 PIRSF PIRSF001413 2 399 4.5E-174 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amet_1082 3bcbab7142bca38df90b4c98a1070801 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 55 380 6.0E-50 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_1082 3bcbab7142bca38df90b4c98a1070801 400 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amet_1082 3bcbab7142bca38df90b4c98a1070801 400 Gene3D G3DSA:3.40.50.1100 12 208 1.3E-191 T 12-10-2018 Amet_1082 3bcbab7142bca38df90b4c98a1070801 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 53.822 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amet_2093 e850d7b2699dbdad4993766bc6776f1c 216 Pfam PF02607 B12 binding domain 11 83 3.1E-12 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2093 e850d7b2699dbdad4993766bc6776f1c 216 Pfam PF02310 B12 binding domain 96 198 6.2E-20 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_2093 e850d7b2699dbdad4993766bc6776f1c 216 SUPERFAMILY SSF52242 77 215 3.14E-40 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_2093 e850d7b2699dbdad4993766bc6776f1c 216 Gene3D G3DSA:3.40.50.280 88 216 3.4E-43 T 12-10-2018 Amet_2093 e850d7b2699dbdad4993766bc6776f1c 216 SMART SM01018 6 90 2.9E-19 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2093 e850d7b2699dbdad4993766bc6776f1c 216 Gene3D G3DSA:1.10.1240.10 5 85 1.9E-25 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2093 e850d7b2699dbdad4993766bc6776f1c 216 SUPERFAMILY SSF47644 7 88 1.96E-17 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_4444 6a28882cf45d58b7aacf0ca708079735 255 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 36.237 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4444 6a28882cf45d58b7aacf0ca708079735 255 SUPERFAMILY SSF55120 1 245 1.58E-85 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4444 6a28882cf45d58b7aacf0ca708079735 255 Pfam PF01416 tRNA pseudouridine synthase 143 245 4.5E-27 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4444 6a28882cf45d58b7aacf0ca708079735 255 Pfam PF01416 tRNA pseudouridine synthase 9 104 4.0E-12 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4444 6a28882cf45d58b7aacf0ca708079735 255 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 239 1.8E-67 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4444 6a28882cf45d58b7aacf0ca708079735 255 Gene3D G3DSA:3.30.70.580 1 105 7.2E-38 T 12-10-2018 Amet_4444 6a28882cf45d58b7aacf0ca708079735 255 Gene3D G3DSA:3.30.70.660 106 242 1.0E-46 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Amet_4444 6a28882cf45d58b7aacf0ca708079735 255 PIRSF PIRSF001430 1 253 1.6E-82 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4563 337c8dce09834617e0360c26c6a05554 262 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 6 260 1.7E-108 T 12-10-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family Amet_2938 7f02b8468477338dfc4256ecffa4bfd1 325 Gene3D G3DSA:3.60.15.10 2 258 1.9E-53 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_2938 7f02b8468477338dfc4256ecffa4bfd1 325 SUPERFAMILY SSF56281 3 323 4.06E-51 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_2938 7f02b8468477338dfc4256ecffa4bfd1 325 Pfam PF00753 Metallo-beta-lactamase superfamily 25 230 1.3E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_2938 7f02b8468477338dfc4256ecffa4bfd1 325 SMART SM00849 23 230 5.7E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_2173 d08dc4867a1ab2442774072d518917d7 468 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 267 8.4E-54 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Amet_2173 d08dc4867a1ab2442774072d518917d7 468 Gene3D G3DSA:3.30.1490.150 400 461 2.0E-34 T 12-10-2018 Amet_2173 d08dc4867a1ab2442774072d518917d7 468 Gene3D G3DSA:3.30.700.20 301 466 2.0E-34 T 12-10-2018 IPR027485 AMMECR1, N-terminal Amet_2173 d08dc4867a1ab2442774072d518917d7 468 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 300 466 2.1E-27 T 12-10-2018 IPR023473 AMMECR1 Amet_2173 d08dc4867a1ab2442774072d518917d7 468 Pfam PF01871 AMMECR1 302 462 4.6E-38 T 12-10-2018 IPR002733 AMMECR1 domain Amet_2173 d08dc4867a1ab2442774072d518917d7 468 SUPERFAMILY SSF143447 294 467 6.02E-44 T 12-10-2018 IPR036071 AMMECR1 domain superfamily Amet_2173 d08dc4867a1ab2442774072d518917d7 468 Gene3D G3DSA:3.40.830.10 3 272 1.5E-68 T 12-10-2018 Amet_2173 d08dc4867a1ab2442774072d518917d7 468 SUPERFAMILY SSF53213 4 287 5.23E-51 T 12-10-2018 Amet_2173 d08dc4867a1ab2442774072d518917d7 468 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 124 258 3.1E-9 T 12-10-2018 Amet_2173 d08dc4867a1ab2442774072d518917d7 468 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 302 462 1.7E-33 T 12-10-2018 IPR027623 AmmeMemoRadiSam system protein A Amet_1224 ce29ed3c5b50d94576023643545ec570 112 SUPERFAMILY SSF57802 1 44 2.86E-10 T 12-10-2018 Amet_1224 ce29ed3c5b50d94576023643545ec570 112 Gene3D G3DSA:2.20.28.10 1 34 3.5E-15 T 12-10-2018 Amet_2242 19b7bf50f13c9f906f8d36b98706fe29 278 Pfam PF01636 Phosphotransferase enzyme family 35 218 9.3E-14 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Amet_2242 19b7bf50f13c9f906f8d36b98706fe29 278 SUPERFAMILY SSF56112 19 238 1.9E-22 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Amet_2242 19b7bf50f13c9f906f8d36b98706fe29 278 Gene3D G3DSA:3.90.1200.10 116 276 5.8E-16 T 12-10-2018 Amet_4536 680b655123aa33f70792b9ca9aae585b 128 SUPERFAMILY SSF51230 57 127 8.51E-25 T 12-10-2018 IPR011053 Single hybrid motif Amet_4536 680b655123aa33f70792b9ca9aae585b 128 Pfam PF00364 Biotin-requiring enzyme 61 126 5.9E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Amet_4536 680b655123aa33f70792b9ca9aae585b 128 Gene3D G3DSA:2.40.50.100 59 127 6.2E-29 T 12-10-2018 Amet_4536 680b655123aa33f70792b9ca9aae585b 128 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 84 101 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amet_3217 680b655123aa33f70792b9ca9aae585b 128 SUPERFAMILY SSF51230 57 127 8.51E-25 T 12-10-2018 IPR011053 Single hybrid motif Amet_3217 680b655123aa33f70792b9ca9aae585b 128 Pfam PF00364 Biotin-requiring enzyme 61 126 5.9E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Amet_3217 680b655123aa33f70792b9ca9aae585b 128 Gene3D G3DSA:2.40.50.100 59 127 6.2E-29 T 12-10-2018 Amet_3217 680b655123aa33f70792b9ca9aae585b 128 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 84 101 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amet_3902 fae3678c67d9e4a0be446f891d4b5258 121 Pfam PF03965 Penicillinase repressor 10 117 1.1E-18 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 Amet_3902 fae3678c67d9e4a0be446f891d4b5258 121 PIRSF PIRSF019455 1 121 1.6E-20 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 Amet_3902 fae3678c67d9e4a0be446f891d4b5258 121 Gene3D G3DSA:1.10.4040.10 73 120 1.6E-9 T 12-10-2018 Amet_3902 fae3678c67d9e4a0be446f891d4b5258 121 Gene3D G3DSA:1.10.10.10 6 72 5.9E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3902 fae3678c67d9e4a0be446f891d4b5258 121 SUPERFAMILY SSF46785 5 120 2.99E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0900 4a3a9e7d8fc219895f37e8152eb40560 277 Pfam PF04962 KduI/IolB family 35 271 1.4E-36 T 12-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Amet_0900 4a3a9e7d8fc219895f37e8152eb40560 277 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 2 277 55.103 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Amet_0900 4a3a9e7d8fc219895f37e8152eb40560 277 SUPERFAMILY SSF51182 2 261 1.71E-110 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Amet_0900 4a3a9e7d8fc219895f37e8152eb40560 277 Gene3D G3DSA:2.60.120.10 11 263 5.5E-123 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_0900 4a3a9e7d8fc219895f37e8152eb40560 277 PIRSF PIRSF006625 2 277 1.8E-135 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Amet_0900 4a3a9e7d8fc219895f37e8152eb40560 277 Gene3D G3DSA:2.60.120.520 31 143 5.5E-123 T 12-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 Amet_3641 c37c2707a003e4d68d559945e547e878 283 SUPERFAMILY SSF55469 4 177 2.49E-27 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_3641 c37c2707a003e4d68d559945e547e878 283 SUPERFAMILY SSF55469 180 259 1.05E-7 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_3641 c37c2707a003e4d68d559945e547e878 283 Gene3D G3DSA:3.40.109.10 4 185 1.4E-27 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_3641 c37c2707a003e4d68d559945e547e878 283 Pfam PF14512 Putative TM nitroreductase 5 248 2.0E-29 T 12-10-2018 IPR029478 Putative nitroreductase TM1586 Amet_3641 c37c2707a003e4d68d559945e547e878 283 Gene3D G3DSA:3.40.109.10 186 282 1.7E-6 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_4411 6c9df0e322b42978538bc3b482306937 627 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 3.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4411 6c9df0e322b42978538bc3b482306937 627 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 528 3.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4411 6c9df0e322b42978538bc3b482306937 627 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 542 3.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4411 6c9df0e322b42978538bc3b482306937 627 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 3.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4411 6c9df0e322b42978538bc3b482306937 627 SMART SM00387 477 589 1.3E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4411 6c9df0e322b42978538bc3b482306937 627 Gene3D G3DSA:3.30.450.20 63 214 3.9E-13 T 12-10-2018 Amet_4411 6c9df0e322b42978538bc3b482306937 627 Pfam PF00512 His Kinase A (phospho-acceptor) domain 361 430 2.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4411 6c9df0e322b42978538bc3b482306937 627 Gene3D G3DSA:3.30.450.20 77 173 3.9E-13 T 12-10-2018 Amet_4411 6c9df0e322b42978538bc3b482306937 627 SUPERFAMILY SSF47384 343 432 2.75E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_4411 6c9df0e322b42978538bc3b482306937 627 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 587 4.7E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4411 6c9df0e322b42978538bc3b482306937 627 Pfam PF02743 Cache domain 44 219 4.2E-14 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_4411 6c9df0e322b42978538bc3b482306937 627 SMART SM00388 360 431 2.7E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4411 6c9df0e322b42978538bc3b482306937 627 SUPERFAMILY SSF55874 420 590 1.7E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4411 6c9df0e322b42978538bc3b482306937 627 Gene3D G3DSA:1.10.287.130 333 429 2.6E-22 T 12-10-2018 Amet_4411 6c9df0e322b42978538bc3b482306937 627 Gene3D G3DSA:3.30.565.10 437 598 1.5E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 SMART SM00287 101 163 1.4E-15 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 SMART SM00287 31 94 1.6 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 SMART SM00287 167 228 10.0 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 Pfam PF00877 NlpC/P60 family 257 369 6.6E-26 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 SUPERFAMILY SSF54001 242 372 3.14E-35 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 Pfam PF08239 Bacterial SH3 domain 111 160 1.6E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 Pfam PF08239 Bacterial SH3 domain 43 88 3.3E-6 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 Gene3D G3DSA:2.30.30.40 94 163 1.8E-20 T 12-10-2018 Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 Gene3D G3DSA:2.30.30.40 29 93 1.9E-8 T 12-10-2018 Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 Gene3D G3DSA:3.90.1720.10 246 372 1.4E-38 T 12-10-2018 Amet_3662 9d3b23ed36599a5f88dde6c516db82f6 372 Gene3D G3DSA:2.30.30.40 165 224 2.7E-7 T 12-10-2018 Amet_3860 1aecd6ed29d8ed439b3a031b7ed69679 196 SUPERFAMILY SSF46689 10 73 1.37E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3860 1aecd6ed29d8ed439b3a031b7ed69679 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 62 4.7E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3860 1aecd6ed29d8ed439b3a031b7ed69679 196 Gene3D G3DSA:1.10.357.10 4 196 1.2E-26 T 12-10-2018 Amet_3860 1aecd6ed29d8ed439b3a031b7ed69679 196 SUPERFAMILY SSF48498 131 191 4.89E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_3860 1aecd6ed29d8ed439b3a031b7ed69679 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 2.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3860 1aecd6ed29d8ed439b3a031b7ed69679 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 2.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 SMART SM00091 196 262 1.1E-7 T 12-10-2018 IPR000014 PAS domain Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 SUPERFAMILY SSF52540 322 566 9.27E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 Gene3D G3DSA:1.10.10.60 570 630 5.7E-6 T 12-10-2018 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 193 253 3.0E-8 T 12-10-2018 IPR000014 PAS domain Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 Gene3D G3DSA:3.40.50.2300 5 183 8.0E-54 T 12-10-2018 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 Pfam PF00158 Sigma-54 interaction domain 323 490 7.4E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 Gene3D G3DSA:3.40.50.10660 78 168 8.0E-54 T 12-10-2018 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 SUPERFAMILY SSF159800 4 186 4.58E-48 T 12-10-2018 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 Pfam PF06506 Propionate catabolism activator 29 191 1.5E-47 T 12-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 Gene3D G3DSA:3.30.450.20 188 295 1.8E-16 T 12-10-2018 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 Gene3D G3DSA:1.10.8.60 495 569 4.3E-21 T 12-10-2018 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 410 425 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 Gene3D G3DSA:3.40.50.300 310 494 1.7E-65 T 12-10-2018 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 SUPERFAMILY SSF55785 192 296 1.13E-9 T 12-10-2018 IPR035965 PAS domain superfamily Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 SMART SM00382 343 488 5.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 SUPERFAMILY SSF46689 538 628 2.29E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0225 22450dc6aeb9203dd867df4dd0da262b 630 Pfam PF00989 PAS fold 198 295 4.5E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_3901 36355b4ead098db3b49111443f35c36a 456 Pfam PF05569 BlaR1 peptidase M56 8 270 1.5E-41 T 12-10-2018 IPR008756 Peptidase M56 Amet_2974 c694307697e84670dd8a7eb01107fa13 249 SUPERFAMILY SSF50891 93 222 2.31E-47 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Amet_2974 c694307697e84670dd8a7eb01107fa13 249 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 205 9.3E-75 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Amet_2974 c694307697e84670dd8a7eb01107fa13 249 SUPERFAMILY SSF160467 6 79 3.4E-19 T 12-10-2018 Amet_2974 c694307697e84670dd8a7eb01107fa13 249 SMART SM00796 5 206 1.9E-97 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D Amet_2974 c694307697e84670dd8a7eb01107fa13 249 Gene3D G3DSA:2.40.100.10 91 231 1.0E-56 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Amet_2974 c694307697e84670dd8a7eb01107fa13 249 Gene3D G3DSA:3.30.1360.40 9 85 3.5E-23 T 12-10-2018 Amet_2974 c694307697e84670dd8a7eb01107fa13 249 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 11 214 1.2E-65 T 12-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 407 1.2E-129 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 408 42.509 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 SUPERFAMILY SSF52374 1 319 2.18E-101 T 12-10-2018 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 SUPERFAMILY SSF55174 301 407 3.36E-15 T 12-10-2018 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 1.4E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 1.4E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 1.4E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 1.4E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 Gene3D G3DSA:3.10.290.10 322 408 6.4E-19 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 Gene3D G3DSA:1.10.240.10 222 321 3.9E-38 T 12-10-2018 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 Pfam PF00579 tRNA synthetases class I (W and Y) 29 319 1.3E-83 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3606 21d7b20fa8f7ceb84e7d058a261c47f6 409 Gene3D G3DSA:3.40.50.620 1 221 8.1E-86 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_4643 77c7002a304508df5cbdf63243d90985 603 SUPERFAMILY SSF48310 210 597 2.09E-140 T 12-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_4643 77c7002a304508df5cbdf63243d90985 603 Gene3D G3DSA:3.60.9.10 1 210 1.7E-87 T 12-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Amet_4643 77c7002a304508df5cbdf63243d90985 603 Gene3D G3DSA:1.10.569.10 241 424 3.9E-144 T 12-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Amet_4643 77c7002a304508df5cbdf63243d90985 603 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 205 1.1E-78 T 12-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_4643 77c7002a304508df5cbdf63243d90985 603 SUPERFAMILY SSF56228 1 209 1.12E-72 T 12-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Amet_4643 77c7002a304508df5cbdf63243d90985 603 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 219 596 4.4E-147 T 12-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_4643 77c7002a304508df5cbdf63243d90985 603 SMART SM00790 4 206 1.0E-113 T 12-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_4643 77c7002a304508df5cbdf63243d90985 603 Gene3D G3DSA:1.10.599.10 239 595 3.9E-144 T 12-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 SUPERFAMILY SSF52335 2 191 4.35E-72 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 SUPERFAMILY SSF53927 204 508 1.3E-118 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 Pfam PF02142 MGS-like domain 13 128 1.4E-28 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 SMART SM00851 13 128 2.6E-57 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 Gene3D G3DSA:3.40.140.20 376 508 1.8E-52 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 440 4.7E-113 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 508 42.675 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 PIRSF PIRSF000414 1 508 1.6E-208 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 SMART SM00798 133 443 2.3E-177 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 Gene3D G3DSA:3.40.50.1380 1 195 4.3E-87 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 508 5.0E-200 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0925 d7cec214e0bc4ffb3ec3ee215154530d 508 Gene3D G3DSA:3.40.140.20 201 356 5.3E-58 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_2414 a54a9f3a69dd78bd706860593d61e7ba 429 Gene3D G3DSA:3.30.2400.10 185 267 1.1E-5 T 12-10-2018 Amet_2414 a54a9f3a69dd78bd706860593d61e7ba 429 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 13 424 6.9E-28 T 12-10-2018 IPR024455 Phage capsid Amet_2414 a54a9f3a69dd78bd706860593d61e7ba 429 Pfam PF05065 Phage capsid family 140 424 9.3E-26 T 12-10-2018 IPR024455 Phage capsid Amet_2414 a54a9f3a69dd78bd706860593d61e7ba 429 SUPERFAMILY SSF56563 132 425 4.71E-46 T 12-10-2018 Amet_2414 a54a9f3a69dd78bd706860593d61e7ba 429 Gene3D G3DSA:3.30.2320.10 268 339 1.1E-5 T 12-10-2018 Amet_2781 5c218158204b9e6585dcb1ce9878e462 352 Gene3D G3DSA:1.10.150.530 3 63 1.8E-17 T 12-10-2018 Amet_2781 5c218158204b9e6585dcb1ce9878e462 352 PIRSF PIRSF006004 2 352 1.3E-131 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Amet_2781 5c218158204b9e6585dcb1ce9878e462 352 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 347 5.3E-128 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Amet_2781 5c218158204b9e6585dcb1ce9878e462 352 Gene3D G3DSA:3.20.20.70 65 327 7.4E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2781 5c218158204b9e6585dcb1ce9878e462 352 SUPERFAMILY SSF102114 100 310 5.76E-11 T 12-10-2018 Amet_2781 5c218158204b9e6585dcb1ce9878e462 352 Pfam PF04055 Radical SAM superfamily 106 269 4.5E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_2781 5c218158204b9e6585dcb1ce9878e462 352 Pfam PF13394 4Fe-4S single cluster domain 111 196 3.3E-6 T 12-10-2018 Amet_2781 5c218158204b9e6585dcb1ce9878e462 352 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 342 73.441 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 SUPERFAMILY SSF111369 64 170 3.14E-5 T 12-10-2018 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 34 57 2.7E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 2.7E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 477 491 2.7E-8 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 Gene3D G3DSA:1.10.287.470 98 182 2.8E-9 T 12-10-2018 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 Gene3D G3DSA:1.10.287.470 322 346 2.3E-14 T 12-10-2018 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 Gene3D G3DSA:2.40.50.100 347 384 2.3E-14 T 12-10-2018 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 Gene3D G3DSA:2.40.50.100 63 97 2.8E-9 T 12-10-2018 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 Pfam PF13533 Biotin-lipoyl like 67 112 4.7E-11 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 Gene3D G3DSA:2.40.30.170 52 62 2.8E-9 T 12-10-2018 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 Gene3D G3DSA:2.40.30.170 385 475 2.3E-14 T 12-10-2018 Amet_1033 76fb47dae1267de300e627c28cc1afaa 491 Pfam PF13437 HlyD family secretion protein 348 462 6.6E-18 T 12-10-2018 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 SUPERFAMILY SSF46934 1 55 2.61E-19 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 Gene3D G3DSA:1.10.8.10 1 55 1.9E-25 T 12-10-2018 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 Gene3D G3DSA:1.10.286.20 110 154 1.7E-58 T 12-10-2018 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 91 214 5.6E-46 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 95 2.3E-38 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 Pfam PF00889 Elongation factor TS 27 196 1.5E-44 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 Hamap MF_00050 Elongation factor Ts [tsf]. 1 214 56.608 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 SUPERFAMILY SSF54713 59 214 7.59E-56 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Amet_2688 f4044cf1a01fd297c21ccbf532b45727 215 Gene3D G3DSA:3.30.479.20 59 195 1.7E-58 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Amet_0063 7d8372ccd35ee9e2709c9475a2cfcf42 440 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 11 434 101.723 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Amet_0063 7d8372ccd35ee9e2709c9475a2cfcf42 440 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 12 433 1.6E-191 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Amet_0063 7d8372ccd35ee9e2709c9475a2cfcf42 440 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 278 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_0063 7d8372ccd35ee9e2709c9475a2cfcf42 440 Pfam PF00202 Aminotransferase class-III 42 405 3.1E-78 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_0063 7d8372ccd35ee9e2709c9475a2cfcf42 440 Gene3D G3DSA:3.40.640.10 77 324 4.4E-172 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0063 7d8372ccd35ee9e2709c9475a2cfcf42 440 SUPERFAMILY SSF53383 7 433 1.75E-128 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_0063 7d8372ccd35ee9e2709c9475a2cfcf42 440 Gene3D G3DSA:3.90.1150.10 15 427 4.4E-172 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0744 42e5fa10ef11131df59c22d90484ab70 65 Pfam PF14070 Putative motility protein 3 64 2.1E-19 T 12-10-2018 IPR025906 Putative motility protein Amet_1484 836ebf9ad84163f31ea0e80ceff90bc6 272 SUPERFAMILY SSF55909 4 269 1.96E-45 T 12-10-2018 Amet_1484 836ebf9ad84163f31ea0e80ceff90bc6 272 Pfam PF02274 Amidinotransferase 64 268 1.3E-26 T 12-10-2018 Amet_1484 836ebf9ad84163f31ea0e80ceff90bc6 272 Gene3D G3DSA:3.75.10.10 18 268 8.5E-53 T 12-10-2018 Amet_0478 4237fbd4ddcb80df0ea05ba9bddd1347 272 Gene3D G3DSA:1.10.1660.10 1 141 5.4E-20 T 12-10-2018 Amet_0478 4237fbd4ddcb80df0ea05ba9bddd1347 272 SUPERFAMILY SSF46955 3 107 8.24E-17 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_0478 4237fbd4ddcb80df0ea05ba9bddd1347 272 Pfam PF00376 MerR family regulatory protein 4 41 2.5E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_0478 4237fbd4ddcb80df0ea05ba9bddd1347 272 SMART SM00422 3 72 1.4E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_0478 4237fbd4ddcb80df0ea05ba9bddd1347 272 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_3684 f6677d0e34368cbbc7a5c48ad39d697b 134 Gene3D G3DSA:3.40.50.620 1 126 1.6E-5 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3684 f6677d0e34368cbbc7a5c48ad39d697b 134 SUPERFAMILY SSF52402 4 100 7.62E-5 T 12-10-2018 Amet_0990 f57344b4f2ec654309cbde6bcbf42ece 853 Gene3D G3DSA:2.20.25.90 44 107 2.2E-13 T 12-10-2018 Amet_0990 f57344b4f2ec654309cbde6bcbf42ece 853 SUPERFAMILY SSF50692 708 852 6.56E-24 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amet_0990 f57344b4f2ec654309cbde6bcbf42ece 853 Pfam PF01568 Molydopterin dinucleotide binding domain 751 842 1.0E-15 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Amet_0990 f57344b4f2ec654309cbde6bcbf42ece 853 SMART SM00926 49 103 3.3E-5 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0990 f57344b4f2ec654309cbde6bcbf42ece 853 Gene3D G3DSA:2.40.40.20 696 853 7.9E-24 T 12-10-2018 Amet_0990 f57344b4f2ec654309cbde6bcbf42ece 853 SUPERFAMILY SSF53706 50 717 9.82E-126 T 12-10-2018 Amet_0990 f57344b4f2ec654309cbde6bcbf42ece 853 Pfam PF00384 Molybdopterin oxidoreductase 106 555 5.9E-37 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0990 f57344b4f2ec654309cbde6bcbf42ece 853 Gene3D G3DSA:3.40.228.10 195 408 6.1E-80 T 12-10-2018 Amet_0990 f57344b4f2ec654309cbde6bcbf42ece 853 Gene3D G3DSA:3.40.50.740 108 570 6.1E-80 T 12-10-2018 Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 SUPERFAMILY SSF52518 360 550 8.21E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 168 2.9E-57 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 552 1.2E-228 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 530 2.8E-50 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 Gene3D G3DSA:3.40.50.970 353 554 6.7E-68 T 12-10-2018 Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 327 2.8E-44 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 SUPERFAMILY SSF52518 2 181 2.18E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 Gene3D G3DSA:3.40.50.970 1 177 1.7E-71 T 12-10-2018 Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 Gene3D G3DSA:3.40.50.1220 187 350 1.6E-57 T 12-10-2018 Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Amet_3400 bc7ebb8d6d5e1ec0946953d904b2e509 554 SUPERFAMILY SSF52467 189 352 6.73E-57 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amet_3700 b09a0fd49262baea47cb1ddd7550d4bb 427 Pfam PF01966 HD domain 255 375 1.3E-23 T 12-10-2018 IPR006674 HD domain Amet_3700 b09a0fd49262baea47cb1ddd7550d4bb 427 SMART SM00471 249 384 1.1E-14 T 12-10-2018 IPR003607 HD/PDEase domain Amet_3700 b09a0fd49262baea47cb1ddd7550d4bb 427 Gene3D G3DSA:1.10.3210.10 229 421 3.3E-73 T 12-10-2018 Amet_3700 b09a0fd49262baea47cb1ddd7550d4bb 427 TIGRFAM TIGR00277 HDIG: HDIG domain 254 343 9.5E-10 T 12-10-2018 IPR006675 HDIG domain Amet_3700 b09a0fd49262baea47cb1ddd7550d4bb 427 SUPERFAMILY SSF109604 235 414 7.46E-42 T 12-10-2018 Amet_3112 1589fea97ab1263ce0fd1d7264584f9f 163 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 12 92 5.2E-5 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amet_3112 1589fea97ab1263ce0fd1d7264584f9f 163 Gene3D G3DSA:2.30.110.10 8 146 5.7E-20 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amet_3112 1589fea97ab1263ce0fd1d7264584f9f 163 SUPERFAMILY SSF50475 11 132 1.05E-18 T 12-10-2018 Amet_0786 3cfc27c2ce2ad8dcd01e092a18dc2178 127 Gene3D G3DSA:1.20.120.340 1 123 3.4E-41 T 12-10-2018 Amet_0786 3cfc27c2ce2ad8dcd01e092a18dc2178 127 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 120 2.6E-37 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Amet_0786 3cfc27c2ce2ad8dcd01e092a18dc2178 127 SUPERFAMILY SSF101116 4 122 6.54E-40 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Amet_0786 3cfc27c2ce2ad8dcd01e092a18dc2178 127 PIRSF PIRSF039090 1 127 6.5E-42 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Amet_0786 3cfc27c2ce2ad8dcd01e092a18dc2178 127 Pfam PF02561 Flagellar protein FliS 7 119 1.5E-40 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Amet_4426 a6f9d650a6245314ed88ebd4e6b59090 242 SUPERFAMILY SSF55681 25 236 1.33E-59 T 12-10-2018 Amet_4426 a6f9d650a6245314ed88ebd4e6b59090 242 PIRSF PIRSF016262 23 241 3.7E-59 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amet_4426 a6f9d650a6245314ed88ebd4e6b59090 242 Gene3D G3DSA:3.30.930.10 25 234 1.0E-72 T 12-10-2018 Amet_4426 a6f9d650a6245314ed88ebd4e6b59090 242 Hamap MF_00013 Octanoyltransferase [lipB]. 26 236 32.642 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amet_4426 a6f9d650a6245314ed88ebd4e6b59090 242 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 99 114 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Amet_4426 a6f9d650a6245314ed88ebd4e6b59090 242 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 53 233 1.7E-47 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amet_4426 a6f9d650a6245314ed88ebd4e6b59090 242 Pfam PF03099 Biotin/lipoate A/B protein ligase family 86 188 1.6E-5 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Amet_4426 a6f9d650a6245314ed88ebd4e6b59090 242 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 103 157 8.0E-25 T 12-10-2018 Amet_1347 d48d18345e576c94a9291872fc684ec8 293 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 277 2.8E-60 T 12-10-2018 IPR000150 Cof family GO:0016787 Amet_1347 d48d18345e576c94a9291872fc684ec8 293 Gene3D G3DSA:3.40.50.1000 4 276 5.6E-74 T 12-10-2018 IPR023214 HAD superfamily Amet_1347 d48d18345e576c94a9291872fc684ec8 293 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 277 5.8E-63 T 12-10-2018 Amet_1347 d48d18345e576c94a9291872fc684ec8 293 SUPERFAMILY SSF56784 1 283 1.49E-67 T 12-10-2018 IPR036412 HAD-like superfamily Amet_1347 d48d18345e576c94a9291872fc684ec8 293 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 12-10-2018 Amet_1347 d48d18345e576c94a9291872fc684ec8 293 ProSitePatterns PS01229 Hypothetical cof family signature 2. 233 255 - T 12-10-2018 Amet_1347 d48d18345e576c94a9291872fc684ec8 293 Gene3D G3DSA:3.30.1240.10 83 208 5.6E-74 T 12-10-2018 Amet_1347 d48d18345e576c94a9291872fc684ec8 293 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 252 1.0E-31 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Amet_3021 dac5232c27c345456ff3e015c09f2165 212 Gene3D G3DSA:3.10.580.10 64 212 1.1E-46 T 12-10-2018 Amet_3021 dac5232c27c345456ff3e015c09f2165 212 Gene3D G3DSA:1.10.10.10 2 63 4.8E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3021 dac5232c27c345456ff3e015c09f2165 212 PIRSF PIRSF026546 4 212 3.3E-89 T 12-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS Amet_3021 dac5232c27c345456ff3e015c09f2165 212 SMART SM00116 86 133 1.7 T 12-10-2018 IPR000644 CBS domain Amet_3021 dac5232c27c345456ff3e015c09f2165 212 SMART SM00116 152 207 7.1 T 12-10-2018 IPR000644 CBS domain Amet_3021 dac5232c27c345456ff3e015c09f2165 212 SUPERFAMILY SSF46785 6 76 6.61E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3021 dac5232c27c345456ff3e015c09f2165 212 Pfam PF08279 HTH domain 9 61 1.5E-11 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Amet_3021 dac5232c27c345456ff3e015c09f2165 212 SUPERFAMILY SSF54631 73 208 2.2E-19 T 12-10-2018 Amet_3021 dac5232c27c345456ff3e015c09f2165 212 Pfam PF00571 CBS domain 146 205 3.9E-4 T 12-10-2018 IPR000644 CBS domain Amet_3021 dac5232c27c345456ff3e015c09f2165 212 Pfam PF00571 CBS domain 84 130 0.0049 T 12-10-2018 IPR000644 CBS domain Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Gene3D G3DSA:3.40.50.20 1 116 2.1E-46 T 12-10-2018 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 7.2E-41 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 SUPERFAMILY SSF52440 1 127 3.17E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 SUPERFAMILY SSF52335 929 1052 4.58E-27 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.2E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 SMART SM01096 420 540 7.8E-63 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1054 12.689 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1044 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.9E-78 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 866 1.3E-30 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Gene3D G3DSA:3.40.50.1380 931 1063 2.6E-29 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 SMART SM00851 949 1033 1.1E-17 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 SUPERFAMILY SSF52440 550 668 1.09E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 SUPERFAMILY SSF56059 128 399 4.42E-108 T 12-10-2018 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Gene3D G3DSA:3.30.470.20 658 928 2.4E-96 T 12-10-2018 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 SUPERFAMILY SSF48108 395 546 4.71E-47 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Gene3D G3DSA:1.10.1030.10 406 546 4.1E-44 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Gene3D G3DSA:3.40.50.20 547 655 7.7E-46 T 12-10-2018 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Gene3D G3DSA:3.30.470.20 119 401 3.7E-122 T 12-10-2018 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 Pfam PF02142 MGS-like domain 950 1033 2.4E-14 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_3378 2a884e93ababaa176c11a4c3822e8389 1075 SUPERFAMILY SSF56059 666 926 2.47E-92 T 12-10-2018 Amet_4022 e15f852c6f98dddb318c6aa88aca31a0 293 Gene3D G3DSA:2.60.40.10 197 292 4.7E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_4022 e15f852c6f98dddb318c6aa88aca31a0 293 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 1 190 5.0E-24 T 12-10-2018 IPR006490 Phage major tail protein, phi13 family Amet_4467 e3d5461c024d522e3a971f42ea07451f 103 Gene3D G3DSA:2.30.30.30 1 101 1.9E-38 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amet_4467 e3d5461c024d522e3a971f42ea07451f 103 SUPERFAMILY SSF50104 1 101 3.05E-36 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amet_4467 e3d5461c024d522e3a971f42ea07451f 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 3.7E-37 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4467 e3d5461c024d522e3a971f42ea07451f 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4467 e3d5461c024d522e3a971f42ea07451f 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 96 20.563 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4467 e3d5461c024d522e3a971f42ea07451f 103 Pfam PF00467 KOW motif 5 36 2.3E-8 T 12-10-2018 IPR005824 KOW Amet_4467 e3d5461c024d522e3a971f42ea07451f 103 SMART SM00739 2 29 4.9E-5 T 12-10-2018 IPR005824 KOW Amet_4467 e3d5461c024d522e3a971f42ea07451f 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 1.6E-27 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1675 b39bab3fc6ba0d9c6327acc5fab8d2ee 245 SMART SM00382 28 215 1.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1675 b39bab3fc6ba0d9c6327acc5fab8d2ee 245 PIRSF PIRSF039085 1 243 2.1E-118 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Amet_1675 b39bab3fc6ba0d9c6327acc5fab8d2ee 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1675 b39bab3fc6ba0d9c6327acc5fab8d2ee 245 Gene3D G3DSA:3.40.50.300 3 242 7.1E-82 T 12-10-2018 Amet_1675 b39bab3fc6ba0d9c6327acc5fab8d2ee 245 Pfam PF00005 ABC transporter 19 167 1.5E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1675 b39bab3fc6ba0d9c6327acc5fab8d2ee 245 SUPERFAMILY SSF52540 3 237 3.38E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3403 5e5971bd6b9c3cda2d25f6563647c41a 159 Gene3D G3DSA:3.30.70.260 1 80 4.8E-31 T 12-10-2018 Amet_3403 5e5971bd6b9c3cda2d25f6563647c41a 159 SUPERFAMILY SSF55021 80 156 1.83E-21 T 12-10-2018 Amet_3403 5e5971bd6b9c3cda2d25f6563647c41a 159 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 77 4.0E-22 T 12-10-2018 Amet_3403 5e5971bd6b9c3cda2d25f6563647c41a 159 Pfam PF13710 ACT domain 14 74 1.1E-13 T 12-10-2018 Amet_3403 5e5971bd6b9c3cda2d25f6563647c41a 159 Pfam PF10369 Small subunit of acetolactate synthase 85 156 1.9E-24 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Amet_3403 5e5971bd6b9c3cda2d25f6563647c41a 159 Gene3D G3DSA:3.30.70.1150 84 159 3.8E-25 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Amet_3403 5e5971bd6b9c3cda2d25f6563647c41a 159 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 156 1.8E-52 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Amet_3403 5e5971bd6b9c3cda2d25f6563647c41a 159 SUPERFAMILY SSF55021 3 75 1.57E-18 T 12-10-2018 Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 Gene3D G3DSA:2.160.10.10 227 452 1.5E-65 T 12-10-2018 Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 450 40.536 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 SUPERFAMILY SSF51161 253 444 1.66E-47 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 Pfam PF12804 MobA-like NTP transferase domain 5 135 1.9E-22 T 12-10-2018 IPR025877 MobA-like NTP transferase Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 298 3.4E-6 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 349 8.0E-6 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 2.6E-178 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 393 427 0.072 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 SUPERFAMILY SSF53448 1 252 4.08E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_0156 9e0bcf9ec8e3f652578446ba4f08bc58 456 Gene3D G3DSA:3.90.550.10 1 226 1.6E-68 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_1837 1f69ac2838b2cb0c69024d2f9c80b87b 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 3.9E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1837 1f69ac2838b2cb0c69024d2f9c80b87b 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 3.9E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1837 1f69ac2838b2cb0c69024d2f9c80b87b 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 3.9E-10 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1837 1f69ac2838b2cb0c69024d2f9c80b87b 112 Gene3D G3DSA:1.10.10.10 1 99 1.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1837 1f69ac2838b2cb0c69024d2f9c80b87b 112 SUPERFAMILY SSF46785 4 88 1.43E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1837 1f69ac2838b2cb0c69024d2f9c80b87b 112 Pfam PF01022 Bacterial regulatory protein, arsR family 17 61 3.8E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1837 1f69ac2838b2cb0c69024d2f9c80b87b 112 SMART SM00418 9 87 1.7E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1846 10a7d7662eae41d46dcd9f8d13cd84ec 311 SUPERFAMILY SSF52540 3 219 4.49E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1846 10a7d7662eae41d46dcd9f8d13cd84ec 311 Pfam PF00005 ABC transporter 21 156 4.1E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1846 10a7d7662eae41d46dcd9f8d13cd84ec 311 SMART SM00382 28 215 4.8E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1846 10a7d7662eae41d46dcd9f8d13cd84ec 311 Gene3D G3DSA:3.40.50.300 1 226 4.9E-37 T 12-10-2018 Amet_1436 25701e277d7a5e525239859b7d79262b 170 Gene3D G3DSA:3.40.630.30 3 169 5.0E-38 T 12-10-2018 Amet_1436 25701e277d7a5e525239859b7d79262b 170 SUPERFAMILY SSF55729 5 167 1.12E-33 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1436 25701e277d7a5e525239859b7d79262b 170 Pfam PF00583 Acetyltransferase (GNAT) family 52 142 8.3E-18 T 12-10-2018 IPR000182 GNAT domain Amet_4059 2af7f23de1d28de47dc4c3022dbaed02 70 SUPERFAMILY SSF143120 12 62 3.4E-8 T 12-10-2018 IPR036165 YefM-like superfamily Amet_4059 2af7f23de1d28de47dc4c3022dbaed02 70 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 21 63 6.0E-6 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Amet_1785 d56b6353eab98c29b2c3d2ad729cece6 969 SUPERFAMILY SSF52540 346 620 8.81E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1785 d56b6353eab98c29b2c3d2ad729cece6 969 SUPERFAMILY SSF56024 834 945 2.55E-8 T 12-10-2018 Amet_1785 d56b6353eab98c29b2c3d2ad729cece6 969 SMART SM00487 441 636 4.6E-22 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_1785 d56b6353eab98c29b2c3d2ad729cece6 969 Gene3D G3DSA:3.30.870.10 838 966 5.4E-9 T 12-10-2018 Amet_1785 d56b6353eab98c29b2c3d2ad729cece6 969 SUPERFAMILY SSF52540 565 832 2.72E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1785 d56b6353eab98c29b2c3d2ad729cece6 969 Pfam PF04851 Type III restriction enzyme, res subunit 445 602 3.0E-18 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amet_1785 d56b6353eab98c29b2c3d2ad729cece6 969 Pfam PF00271 Helicase conserved C-terminal domain 679 783 1.3E-6 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_1785 d56b6353eab98c29b2c3d2ad729cece6 969 Gene3D G3DSA:3.40.50.300 645 837 1.7E-34 T 12-10-2018 Amet_1785 d56b6353eab98c29b2c3d2ad729cece6 969 Gene3D G3DSA:3.40.50.300 435 628 8.1E-34 T 12-10-2018 Amet_4449 333c5dcd48e34810babea932000d2b20 315 SUPERFAMILY SSF55257 5 224 4.32E-31 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 SUPERFAMILY SSF47789 247 311 1.7E-23 T 12-10-2018 Amet_4449 333c5dcd48e34810babea932000d2b20 315 Gene3D G3DSA:1.10.150.20 237 314 4.1E-32 T 12-10-2018 Amet_4449 333c5dcd48e34810babea932000d2b20 315 Gene3D G3DSA:3.30.1360.10 16 221 2.7E-89 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 1.0E-24 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 311 1.5E-122 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 2.4E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 Gene3D G3DSA:2.170.120.12 50 170 2.7E-89 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 1.8E-27 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 SMART SM00662 20 227 8.9E-98 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 SUPERFAMILY SSF56553 50 171 1.96E-45 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 58 152 9.4E-27 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4449 333c5dcd48e34810babea932000d2b20 315 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.706 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_0456 0afa136c1c9edea1c32abbda27114db6 340 SUPERFAMILY SSF53822 32 322 2.75E-43 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_0456 0afa136c1c9edea1c32abbda27114db6 340 Pfam PF13407 Periplasmic binding protein domain 36 305 2.2E-36 T 12-10-2018 IPR025997 Periplasmic binding protein Amet_0456 0afa136c1c9edea1c32abbda27114db6 340 Gene3D G3DSA:3.40.50.2300 35 314 9.3E-74 T 12-10-2018 Amet_0456 0afa136c1c9edea1c32abbda27114db6 340 Gene3D G3DSA:3.40.50.2300 138 323 9.3E-74 T 12-10-2018 Amet_3658 ac8b8febcdef63d7997fc4476b28ddbc 369 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 359 3.1E-139 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Amet_3658 ac8b8febcdef63d7997fc4476b28ddbc 369 SUPERFAMILY SSF52402 6 245 3.75E-59 T 12-10-2018 Amet_3658 ac8b8febcdef63d7997fc4476b28ddbc 369 Gene3D G3DSA:2.30.30.280 214 280 2.9E-26 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Amet_3658 ac8b8febcdef63d7997fc4476b28ddbc 369 Gene3D G3DSA:3.40.50.620 1 213 1.1E-97 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3658 ac8b8febcdef63d7997fc4476b28ddbc 369 Pfam PF03054 tRNA methyl transferase 9 359 1.3E-144 T 12-10-2018 Amet_3658 ac8b8febcdef63d7997fc4476b28ddbc 369 Gene3D G3DSA:2.40.30.10 282 369 2.9E-29 T 12-10-2018 Amet_3658 ac8b8febcdef63d7997fc4476b28ddbc 369 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 360 40.751 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Amet_4529 c14bd3c1f43e7aced86075ae25617b9d 174 Gene3D G3DSA:1.10.1760.20 5 172 6.9E-43 T 12-10-2018 Amet_4529 c14bd3c1f43e7aced86075ae25617b9d 174 Pfam PF12822 ECF transporter, substrate-specific component 10 161 5.0E-25 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Amet_0575 fa42e78351a7b8cfa595b43fc3dcff4f 202 PIRSF PIRSF000495 1 202 2.1E-73 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Amet_0575 fa42e78351a7b8cfa595b43fc3dcff4f 202 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 199 36.372 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Amet_0575 fa42e78351a7b8cfa595b43fc3dcff4f 202 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 198 5.9E-76 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Amet_0575 fa42e78351a7b8cfa595b43fc3dcff4f 202 SUPERFAMILY SSF52317 2 200 1.2E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0575 fa42e78351a7b8cfa595b43fc3dcff4f 202 Gene3D G3DSA:3.40.50.880 1 201 1.7E-75 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0575 fa42e78351a7b8cfa595b43fc3dcff4f 202 Pfam PF00117 Glutamine amidotransferase class-I 4 193 2.2E-22 T 12-10-2018 IPR017926 Glutamine amidotransferase Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 Gene3D G3DSA:3.40.50.300 127 313 9.8E-64 T 12-10-2018 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 Pfam PF00158 Sigma-54 interaction domain 141 308 6.7E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 SUPERFAMILY SSF46689 355 459 4.93E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 Gene3D G3DSA:1.10.8.60 314 393 8.9E-26 T 12-10-2018 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 8.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 462 8.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 SUPERFAMILY SSF52540 141 384 8.34E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 SMART SM00448 3 114 1.0E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 Pfam PF00072 Response regulator receiver domain 5 111 4.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 SMART SM00382 162 305 2.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 Pfam PF02954 Bacterial regulatory protein, Fis family 419 459 3.8E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 SUPERFAMILY SSF52172 3 187 4.41E-39 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 Gene3D G3DSA:1.10.10.60 394 460 7.7E-12 T 12-10-2018 Amet_2978 f0c4b3f47cc75a88b66cf20026db9cb5 462 Gene3D G3DSA:3.40.50.2300 3 122 4.9E-33 T 12-10-2018 Amet_1074 3896030be5a09db054277431b29a2d39 145 PIRSF PIRSF001399 1 145 6.8E-55 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amet_1074 3896030be5a09db054277431b29a2d39 145 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 144 4.0E-79 T 12-10-2018 Amet_1074 3896030be5a09db054277431b29a2d39 145 Pfam PF01220 Dehydroquinase class II 4 140 1.1E-53 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amet_1074 3896030be5a09db054277431b29a2d39 145 Gene3D G3DSA:3.40.50.9100 1 145 3.0E-59 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amet_1074 3896030be5a09db054277431b29a2d39 145 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 145 61.935 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amet_1074 3896030be5a09db054277431b29a2d39 145 SUPERFAMILY SSF52304 3 143 1.7E-54 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amet_1074 3896030be5a09db054277431b29a2d39 145 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 141 2.7E-54 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 Pfam PF00270 DEAD/DEAH box helicase 271 423 6.7E-10 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 Gene3D G3DSA:1.10.3210.30 2 186 1.1E-15 T 12-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 Gene3D G3DSA:3.40.50.300 439 622 2.9E-12 T 12-10-2018 Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 Gene3D G3DSA:3.40.50.300 256 438 1.6E-12 T 12-10-2018 Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 SUPERFAMILY SSF52540 267 594 1.44E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 SUPERFAMILY SSF109604 14 118 9.42E-7 T 12-10-2018 Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 Pfam PF00271 Helicase conserved C-terminal domain 476 584 5.6E-5 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 17 208 4.4E-30 T 12-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 SMART SM00490 495 584 5.1E-4 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 273 601 4.6E-43 T 12-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core Amet_1662 4a120402ed01a61fe077a6bfdb3446ae 798 SMART SM00487 246 451 4.7E-4 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_3771 1a72dbc6be8ecf9baf674b5b90107a1c 262 SUPERFAMILY SSF52540 4 231 4.86E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3771 1a72dbc6be8ecf9baf674b5b90107a1c 262 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3771 1a72dbc6be8ecf9baf674b5b90107a1c 262 Pfam PF00005 ABC transporter 20 167 3.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3771 1a72dbc6be8ecf9baf674b5b90107a1c 262 Gene3D G3DSA:3.40.50.300 1 257 4.9E-66 T 12-10-2018 Amet_3771 1a72dbc6be8ecf9baf674b5b90107a1c 262 SMART SM00382 28 217 6.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2343 f0c110f4c686535d768379ae97afce30 87 SMART SM01323 2 85 5.9E-37 T 12-10-2018 IPR003849 Preprotein translocase YajC Amet_2343 f0c110f4c686535d768379ae97afce30 87 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 8 85 1.5E-25 T 12-10-2018 IPR003849 Preprotein translocase YajC Amet_2343 f0c110f4c686535d768379ae97afce30 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 1.3E-12 T 12-10-2018 IPR003849 Preprotein translocase YajC Amet_2343 f0c110f4c686535d768379ae97afce30 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 42 60 1.3E-12 T 12-10-2018 IPR003849 Preprotein translocase YajC Amet_2343 f0c110f4c686535d768379ae97afce30 87 Pfam PF02699 Preprotein translocase subunit 8 82 7.0E-29 T 12-10-2018 IPR003849 Preprotein translocase YajC Amet_3056 58f6a1bb1ca4278646c456079a9c9197 87 Gene3D G3DSA:1.20.58.110 1 86 5.2E-23 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_3056 58f6a1bb1ca4278646c456079a9c9197 87 SUPERFAMILY SSF46992 3 86 1.44E-24 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_3056 58f6a1bb1ca4278646c456079a9c9197 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.186 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_3056 58f6a1bb1ca4278646c456079a9c9197 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.5E-23 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_3056 58f6a1bb1ca4278646c456079a9c9197 87 Pfam PF01649 Ribosomal protein S20 2 84 3.9E-22 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_3056 58f6a1bb1ca4278646c456079a9c9197 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 16 80 5.0E-29 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_0388 602e7fee668e63697235779ba729edbc 685 Gene3D G3DSA:3.30.420.10 258 496 7.2E-45 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_0388 602e7fee668e63697235779ba729edbc 685 Gene3D G3DSA:2.30.30.130 497 572 1.1E-8 T 12-10-2018 IPR009004 Transposase, Mu, C-terminal Amet_0388 602e7fee668e63697235779ba729edbc 685 Pfam PF02914 Bacteriophage Mu transposase 265 441 7.9E-10 T 12-10-2018 IPR004189 Bacteriophage Mu, transposase GO:0003677|GO:0004803|GO:0006313|GO:0015074 Amet_0388 602e7fee668e63697235779ba729edbc 685 Pfam PF09299 Mu transposase, C-terminal 507 569 1.7E-16 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal Amet_0388 602e7fee668e63697235779ba729edbc 685 SUPERFAMILY SSF53098 267 497 3.22E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_0388 602e7fee668e63697235779ba729edbc 685 SUPERFAMILY SSF50610 505 571 2.62E-9 T 12-10-2018 IPR009004 Transposase, Mu, C-terminal Amet_0388 602e7fee668e63697235779ba729edbc 685 ProDom PD223702 DNA TRANSPOSASE DNA-BINDING TRANSPOSABLE INTEGRATION ELEMENT RECOMBINATION TRANSPOSASE EXCISION TRANSPOSITION 285 470 0.005 T 12-10-2018 Amet_3000 734d1306d2a6ae4e2e70bd3d2c6502b4 687 SUPERFAMILY SSF56425 476 600 1.64E-15 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3000 734d1306d2a6ae4e2e70bd3d2c6502b4 687 Pfam PF04205 FMN-binding domain 40 111 2.9E-13 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_3000 734d1306d2a6ae4e2e70bd3d2c6502b4 687 SUPERFAMILY SSF51905 127 684 7.27E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3000 734d1306d2a6ae4e2e70bd3d2c6502b4 687 Pfam PF00890 FAD binding domain 139 668 2.0E-53 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3000 734d1306d2a6ae4e2e70bd3d2c6502b4 687 Gene3D G3DSA:3.50.50.60 280 683 3.2E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3000 734d1306d2a6ae4e2e70bd3d2c6502b4 687 Gene3D G3DSA:3.50.50.60 94 211 7.3E-19 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3000 734d1306d2a6ae4e2e70bd3d2c6502b4 687 Gene3D G3DSA:3.90.700.10 452 625 3.2E-79 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3000 734d1306d2a6ae4e2e70bd3d2c6502b4 687 SMART SM00900 40 114 1.0E-18 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 Pfam PF00141 Peroxidase 397 704 6.8E-40 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 Pfam PF00141 Peroxidase 77 389 2.0E-47 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 Hamap MF_01961 Catalase-peroxidase [katG]. 2 730 42.572 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 Gene3D G3DSA:1.10.420.10 582 705 1.4E-153 T 12-10-2018 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00458 Haem peroxidase superfamily signature 251 266 6.6E-20 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00458 Haem peroxidase superfamily signature 87 101 6.6E-20 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00458 Haem peroxidase superfamily signature 310 325 6.6E-20 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00458 Haem peroxidase superfamily signature 165 177 6.6E-20 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00458 Haem peroxidase superfamily signature 147 164 6.6E-20 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 Gene3D G3DSA:1.10.520.10 427 729 1.4E-153 T 12-10-2018 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 14 729 0.0 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 ProSitePatterns PS00436 Peroxidases active site signature. 87 98 - T 12-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 259 282 5.1E-56 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 23 45 5.1E-56 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 474 500 5.1E-56 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 49 62 5.1E-56 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 64 89 5.1E-56 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 SUPERFAMILY SSF48113 424 729 7.37E-115 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 SUPERFAMILY SSF48113 15 423 7.66E-158 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 Gene3D G3DSA:1.10.420.20 188 391 5.1E-219 T 12-10-2018 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 251 261 - T 12-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 Amet_1570 d689a0e8bb7dcd95562b02fb8b542c42 730 Gene3D G3DSA:1.10.520.10 17 424 5.1E-219 T 12-10-2018 Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 PIRSF PIRSF001467 3 164 3.4E-38 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 158 8.3E-47 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 41 58 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 Gene3D G3DSA:2.40.100.10 2 168 1.4E-54 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 SUPERFAMILY SSF50891 6 160 1.61E-51 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 58 2.9E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 91 106 2.9E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 2.9E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 20 35 2.9E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_3656 7af3dd88650a5a198e9897694d1ec723 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 118 2.9E-19 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 SUPERFAMILY SSF58104 332 661 7.59E-65 T 12-10-2018 Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 609 3.4E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 SUPERFAMILY SSF103190 64 167 1.15E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 Pfam PF02743 Cache domain 34 264 1.9E-27 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 SMART SM00304 302 357 2.4E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 Gene3D G3DSA:3.30.450.20 137 283 8.4E-29 T 12-10-2018 Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 Gene3D G3DSA:1.10.287.950 336 661 2.3E-62 T 12-10-2018 Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 SMART SM00283 386 661 1.2E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 513 542 2.7E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_2934 c5666603c6b81aeaaa34d16749efd011 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 443 2.7E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_0075 c2756d8a61a35391fc7b7f366b2bba7b 354 SUPERFAMILY SSF159672 1 229 4.45E-60 T 12-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Amet_0075 c2756d8a61a35391fc7b7f366b2bba7b 354 Pfam PF11761 Cobalamin biosynthesis central region 137 219 1.1E-8 T 12-10-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Amet_0075 c2756d8a61a35391fc7b7f366b2bba7b 354 SUPERFAMILY SSF159664 215 346 6.67E-30 T 12-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Amet_0075 c2756d8a61a35391fc7b7f366b2bba7b 354 Pfam PF11760 Cobalamin synthesis G N-terminal 51 131 1.1E-35 T 12-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Amet_0075 c2756d8a61a35391fc7b7f366b2bba7b 354 Pfam PF01890 Cobalamin synthesis G C-terminus 222 343 1.8E-23 T 12-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 Amet_0075 c2756d8a61a35391fc7b7f366b2bba7b 354 Gene3D G3DSA:3.30.420.180 212 350 2.3E-26 T 12-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Amet_0075 c2756d8a61a35391fc7b7f366b2bba7b 354 Gene3D G3DSA:3.40.50.11220 1 126 1.0E-33 T 12-10-2018 Amet_3031 0b121ea3398add5c776d92bb11d8b330 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 154 22.925 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Amet_3031 0b121ea3398add5c776d92bb11d8b330 155 Gene3D G3DSA:3.40.390.30 3 154 5.8E-45 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Amet_3031 0b121ea3398add5c776d92bb11d8b330 155 Pfam PF02130 Uncharacterized protein family UPF0054 16 149 8.2E-44 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Amet_3031 0b121ea3398add5c776d92bb11d8b330 155 SUPERFAMILY SSF55486 6 153 1.39E-43 T 12-10-2018 Amet_3031 0b121ea3398add5c776d92bb11d8b330 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 42 150 2.5E-39 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 SUPERFAMILY SSF56712 3 598 2.09E-174 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Amet_3348 d095995e06f2afefb0835fafffb77db5 726 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 511 525 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 305 314 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 SMART SM00437 262 548 1.6E-83 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 724 4.8E-264 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 Gene3D G3DSA:1.10.290.10 271 401 6.7E-146 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 SMART SM00493 3 126 9.4E-16 T 12-10-2018 IPR006171 TOPRIM domain Amet_3348 d095995e06f2afefb0835fafffb77db5 726 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 314 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 Pfam PF01751 Toprim domain 5 134 2.6E-15 T 12-10-2018 IPR006171 TOPRIM domain Amet_3348 d095995e06f2afefb0835fafffb77db5 726 Gene3D G3DSA:3.40.50.140 3 154 9.0E-53 T 12-10-2018 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 SMART SM00436 126 216 7.7E-40 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 Gene3D G3DSA:2.70.20.10 210 476 6.7E-146 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 637 65.437 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 Gene3D G3DSA:1.10.460.10 160 592 6.7E-146 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Amet_3348 d095995e06f2afefb0835fafffb77db5 726 Pfam PF01131 DNA topoisomerase 152 582 1.0E-120 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 Pfam PF00072 Response regulator receiver domain 5 113 3.4E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 Pfam PF03704 Bacterial transcriptional activator domain 233 363 4.6E-12 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 SMART SM01043 228 367 1.8E-16 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 205 2.0E-5 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 Gene3D G3DSA:1.10.10.10 125 223 1.2E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 SUPERFAMILY SSF46894 132 221 6.24E-10 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 Gene3D G3DSA:3.40.50.2300 1 124 2.3E-23 T 12-10-2018 Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 Gene3D G3DSA:1.25.40.10 227 367 5.9E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 SUPERFAMILY SSF48452 32 362 1.25E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 SMART SM00448 2 113 1.3E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3804 1ea2ee949746ed92329f8de50f8384b3 368 SUPERFAMILY SSF52172 1 124 1.42E-24 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0212 19abcc6b10324a01b039385c2e32e2f4 389 Pfam PF12838 4Fe-4S dicluster domain 11 57 7.3E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_0212 19abcc6b10324a01b039385c2e32e2f4 389 Pfam PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus 156 328 1.8E-30 T 12-10-2018 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal Amet_0212 19abcc6b10324a01b039385c2e32e2f4 389 SUPERFAMILY SSF54862 8 58 1.44E-14 T 12-10-2018 Amet_0212 19abcc6b10324a01b039385c2e32e2f4 389 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 11 22 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0212 19abcc6b10324a01b039385c2e32e2f4 389 Gene3D G3DSA:3.30.70.20 4 77 4.4E-11 T 12-10-2018 Amet_0212 19abcc6b10324a01b039385c2e32e2f4 389 Pfam PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term 72 142 6.3E-9 T 12-10-2018 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal Amet_4250 109f1b55d3ee8c61c1f344de7a61f39c 172 Gene3D G3DSA:1.10.1740.10 1 102 8.9E-16 T 12-10-2018 Amet_4250 109f1b55d3ee8c61c1f344de7a61f39c 172 Pfam PF04542 Sigma-70 region 2 27 88 5.6E-8 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4250 109f1b55d3ee8c61c1f344de7a61f39c 172 Pfam PF04545 Sigma-70, region 4 116 164 4.5E-11 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amet_4250 109f1b55d3ee8c61c1f344de7a61f39c 172 SUPERFAMILY SSF88946 3 102 8.24E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4250 109f1b55d3ee8c61c1f344de7a61f39c 172 SUPERFAMILY SSF88659 105 167 3.18E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_4250 109f1b55d3ee8c61c1f344de7a61f39c 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 165 2.1E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_4250 109f1b55d3ee8c61c1f344de7a61f39c 172 Gene3D G3DSA:1.10.10.10 103 171 2.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3747 d2e86d2dd78753f659d86d2082e46da8 471 SUPERFAMILY SSF56176 8 223 5.14E-63 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_3747 d2e86d2dd78753f659d86d2082e46da8 471 Gene3D G3DSA:1.10.45.10 428 467 5.8E-12 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Amet_3747 d2e86d2dd78753f659d86d2082e46da8 471 Pfam PF02913 FAD linked oxidases, C-terminal domain 223 466 4.2E-57 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Amet_3747 d2e86d2dd78753f659d86d2082e46da8 471 Gene3D G3DSA:3.30.70.2740 345 427 5.8E-15 T 12-10-2018 Amet_3747 d2e86d2dd78753f659d86d2082e46da8 471 Gene3D G3DSA:3.30.43.10 1 99 9.3E-27 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Amet_3747 d2e86d2dd78753f659d86d2082e46da8 471 Pfam PF01565 FAD binding domain 47 185 2.7E-36 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amet_3747 d2e86d2dd78753f659d86d2082e46da8 471 Gene3D G3DSA:3.30.465.10 101 221 8.9E-39 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_3747 d2e86d2dd78753f659d86d2082e46da8 471 Gene3D G3DSA:3.30.70.2190 223 340 1.8E-7 T 12-10-2018 Amet_3747 d2e86d2dd78753f659d86d2082e46da8 471 SUPERFAMILY SSF55103 226 469 2.29E-60 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Amet_0838 a058a64f0c1f4c7af68037b7efe3e6c2 134 SUPERFAMILY SSF47413 24 90 2.13E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0838 a058a64f0c1f4c7af68037b7efe3e6c2 134 SMART SM00530 31 87 2.5E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0838 a058a64f0c1f4c7af68037b7efe3e6c2 134 Gene3D G3DSA:1.10.260.40 28 93 1.2E-9 T 12-10-2018 Amet_0838 a058a64f0c1f4c7af68037b7efe3e6c2 134 Pfam PF01381 Helix-turn-helix 32 87 4.5E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1634 71f688c6b2eb373a58991f62c09ff8bd 63 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.7E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amet_1634 71f688c6b2eb373a58991f62c09ff8bd 63 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.7E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amet_1634 71f688c6b2eb373a58991f62c09ff8bd 63 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.7E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amet_1634 71f688c6b2eb373a58991f62c09ff8bd 63 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 19.344 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amet_1634 71f688c6b2eb373a58991f62c09ff8bd 63 Pfam PF01632 Ribosomal protein L35 2 62 2.4E-27 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1634 71f688c6b2eb373a58991f62c09ff8bd 63 Gene3D G3DSA:2.40.50.530 1 63 5.6E-24 T 12-10-2018 Amet_1634 71f688c6b2eb373a58991f62c09ff8bd 63 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 7.6E-28 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Amet_1634 71f688c6b2eb373a58991f62c09ff8bd 63 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_1634 71f688c6b2eb373a58991f62c09ff8bd 63 SUPERFAMILY SSF143034 2 63 1.31E-23 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1642 2cd2a2a4df1a192689fab8dd36118e83 807 Pfam PF12392 Collagenase 385 504 1.4E-25 T 12-10-2018 IPR020988 Peptidase U32, collagenase Amet_1642 2cd2a2a4df1a192689fab8dd36118e83 807 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Amet_1642 2cd2a2a4df1a192689fab8dd36118e83 807 Pfam PF01136 Peptidase family U32 594 782 1.9E-16 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Amet_1642 2cd2a2a4df1a192689fab8dd36118e83 807 Pfam PF01136 Peptidase family U32 78 303 2.7E-89 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Amet_0371 8b5f55c9dc8b1e897c868b88fafbc89e 123 PRINTS PR01002 Flagellar protein FlgJ signature 70 92 2.7E-6 T 12-10-2018 Amet_0371 8b5f55c9dc8b1e897c868b88fafbc89e 123 PRINTS PR01002 Flagellar protein FlgJ signature 23 46 2.7E-6 T 12-10-2018 Amet_0371 8b5f55c9dc8b1e897c868b88fafbc89e 123 Pfam PF10135 Rod binding protein 45 93 2.1E-15 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Amet_2762 1122cec6265edaf81ce35e42c72d4a07 176 Pfam PF02620 Uncharacterized ACR, COG1399 59 172 6.6E-27 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 SUPERFAMILY SSF53732 18 540 4.32E-113 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 Gene3D G3DSA:3.40.1060.10 193 305 1.8E-17 T 12-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 SUPERFAMILY SSF52016 523 766 4.12E-35 T 12-10-2018 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 Gene3D G3DSA:3.30.499.10 344 495 3.7E-25 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 Pfam PF00694 Aconitase C-terminal domain 650 698 3.2E-5 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 Gene3D G3DSA:3.30.499.10 20 192 1.5E-22 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 Pfam PF00330 Aconitase family (aconitate hydratase) 50 481 2.9E-76 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 Gene3D G3DSA:3.20.19.10 552 766 7.1E-23 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 PRINTS PR00415 Aconitase family signature 426 439 8.5E-5 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 PRINTS PR00415 Aconitase family signature 148 161 8.5E-5 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 PRINTS PR00415 Aconitase family signature 224 237 8.5E-5 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3214 c1dbbabb387e4b3956328bb9cc55d2a2 766 PRINTS PR00415 Aconitase family signature 305 319 8.5E-5 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_4189 c3594205093f1d51cfb6a97198b8eaf6 307 Pfam PF13580 SIS domain 42 167 6.2E-8 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amet_4189 c3594205093f1d51cfb6a97198b8eaf6 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.793 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Amet_4189 c3594205093f1d51cfb6a97198b8eaf6 307 Gene3D G3DSA:3.40.50.10490 3 220 3.6E-78 T 12-10-2018 Amet_4189 c3594205093f1d51cfb6a97198b8eaf6 307 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 Amet_4189 c3594205093f1d51cfb6a97198b8eaf6 307 SUPERFAMILY SSF53697 7 250 8.23E-70 T 12-10-2018 Amet_4189 c3594205093f1d51cfb6a97198b8eaf6 307 Gene3D G3DSA:1.10.8.1080 221 298 1.1E-26 T 12-10-2018 Amet_4189 c3594205093f1d51cfb6a97198b8eaf6 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 298 4.3E-123 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 55 9.3E-14 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 Gene3D G3DSA:2.20.25.90 1 61 2.3E-10 T 12-10-2018 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 SUPERFAMILY SSF53706 2 546 7.72E-131 T 12-10-2018 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 Pfam PF00384 Molybdopterin oxidoreductase 59 459 8.7E-56 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 Pfam PF01568 Molydopterin dinucleotide binding domain 543 645 2.2E-14 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 Gene3D G3DSA:3.30.2070.10 418 507 5.8E-122 T 12-10-2018 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 Gene3D G3DSA:3.40.228.10 132 525 5.8E-122 T 12-10-2018 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 Gene3D G3DSA:3.40.50.740 67 464 5.8E-122 T 12-10-2018 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 Gene3D G3DSA:2.40.40.20 530 653 1.4E-19 T 12-10-2018 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 SMART SM00926 1 56 4.6E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4646 6794956e4cbef7f0b554809217f60e56 654 SUPERFAMILY SSF50692 534 651 3.11E-23 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amet_0101 bbdfd2d9d019ebf53fc3c2a30aa3151f 210 SMART SM00382 28 209 3.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0101 bbdfd2d9d019ebf53fc3c2a30aa3151f 210 SUPERFAMILY SSF52540 7 209 5.05E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0101 bbdfd2d9d019ebf53fc3c2a30aa3151f 210 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0101 bbdfd2d9d019ebf53fc3c2a30aa3151f 210 TIGRFAM TIGR03608 L_ocin_972_ABC: putative bacteriocin export ABC transporter, lactococcin 972 group 6 210 5.4E-82 T 12-10-2018 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group Amet_0101 bbdfd2d9d019ebf53fc3c2a30aa3151f 210 Pfam PF00005 ABC transporter 19 166 7.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0101 bbdfd2d9d019ebf53fc3c2a30aa3151f 210 Gene3D G3DSA:3.40.50.300 1 210 2.3E-60 T 12-10-2018 Amet_2421 54a3b25c47bcde30f7dcf6799166e1ba 147 SUPERFAMILY SSF69279 9 144 2.04E-41 T 12-10-2018 Amet_2421 54a3b25c47bcde30f7dcf6799166e1ba 147 Gene3D G3DSA:2.30.110.40 6 142 8.2E-44 T 12-10-2018 IPR038628 XkdM-like superfamily Amet_2421 54a3b25c47bcde30f7dcf6799166e1ba 147 Pfam PF09393 Phage tail tube protein 7 142 3.6E-49 T 12-10-2018 IPR018989 Phage tail tube protein Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 2.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 2.4E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 Gene3D G3DSA:1.10.260.40 1 60 4.7E-21 T 12-10-2018 Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 SUPERFAMILY SSF53822 73 331 9.9E-71 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 Gene3D G3DSA:3.40.50.2300 78 321 6.5E-65 T 12-10-2018 Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 SMART SM00354 2 72 1.0E-22 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 SUPERFAMILY SSF47413 2 60 1.23E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 Gene3D G3DSA:3.40.50.2300 159 327 6.5E-65 T 12-10-2018 Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 Pfam PF13377 Periplasmic binding protein-like domain 168 329 3.4E-36 T 12-10-2018 Amet_0902 191a57662e8585a1cb3a54e0f776ae43 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 4.9E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Amet_2959 5d43762d0d61552fa670329cb6a2ae43 295 SUPERFAMILY SSF51735 2 163 8.82E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2959 5d43762d0d61552fa670329cb6a2ae43 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 285 2.1E-39 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Amet_2959 5d43762d0d61552fa670329cb6a2ae43 295 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Amet_2959 5d43762d0d61552fa670329cb6a2ae43 295 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 3 293 1.6E-120 T 12-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 Amet_2959 5d43762d0d61552fa670329cb6a2ae43 295 SUPERFAMILY SSF48179 164 293 1.56E-36 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_2959 5d43762d0d61552fa670329cb6a2ae43 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 1.1E-51 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Amet_2959 5d43762d0d61552fa670329cb6a2ae43 295 PIRSF PIRSF000103 1 294 8.0E-86 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Amet_2959 5d43762d0d61552fa670329cb6a2ae43 295 Gene3D G3DSA:1.10.1040.10 163 292 7.4E-39 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amet_2959 5d43762d0d61552fa670329cb6a2ae43 295 Gene3D G3DSA:3.40.50.720 1 162 4.2E-57 T 12-10-2018 Amet_3816 331185a58a7495e0ad63fe9402d44700 373 Pfam PF07282 Putative transposase DNA-binding domain 296 364 3.2E-20 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Amet_3816 331185a58a7495e0ad63fe9402d44700 373 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 251 323 1.4E-12 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Amet_3816 331185a58a7495e0ad63fe9402d44700 373 Pfam PF01385 Probable transposase 174 282 7.0E-22 T 12-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Amet_3816 331185a58a7495e0ad63fe9402d44700 373 Pfam PF12323 Helix-turn-helix domain 1 45 1.5E-21 T 12-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain Amet_4278 f610f6c5993653efaaaf8d2324526103 181 Pfam PF00293 NUDIX domain 32 70 1.7E-6 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amet_4278 f610f6c5993653efaaaf8d2324526103 181 Gene3D G3DSA:3.90.79.10 2 138 4.9E-27 T 12-10-2018 Amet_4278 f610f6c5993653efaaaf8d2324526103 181 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amet_4278 f610f6c5993653efaaaf8d2324526103 181 SUPERFAMILY SSF55811 20 130 5.69E-17 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amet_0969 2dec1f764df7fe561b639668d7d6c960 350 Gene3D G3DSA:3.40.190.170 43 350 1.4E-79 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Amet_0969 2dec1f764df7fe561b639668d7d6c960 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 60 327 5.1E-57 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 SMART SM01086 311 397 1.8E-29 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 Gene3D G3DSA:3.30.50.30 2 49 2.4E-22 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 SUPERFAMILY SSF52540 60 397 1.66E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 SUPERFAMILY SSF57716 10 45 6.99E-12 T 12-10-2018 Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 7.6E-16 T 12-10-2018 IPR019489 Clp ATPase, C-terminal Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 Gene3D G3DSA:3.40.50.300 53 309 5.1E-108 T 12-10-2018 Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 Pfam PF06689 ClpX C4-type zinc finger 11 47 1.1E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 Gene3D G3DSA:1.10.8.60 310 418 8.5E-37 T 12-10-2018 Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 SMART SM00382 107 327 1.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 406 3.7E-207 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.908 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 SMART SM00994 9 48 1.8E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Amet_1068 214feffba6af6001c021aa7cbbc0b758 420 Pfam PF07724 AAA domain (Cdc48 subfamily) 107 305 9.8E-51 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_3329 615262ece39d0ee62dd06b7748a3c9bc 308 Gene3D G3DSA:1.10.3720.10 94 307 5.4E-19 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3329 615262ece39d0ee62dd06b7748a3c9bc 308 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 81 7.4E-7 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amet_3329 615262ece39d0ee62dd06b7748a3c9bc 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 307 2.0E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_3329 615262ece39d0ee62dd06b7748a3c9bc 308 SUPERFAMILY SSF161098 101 306 7.33E-24 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 91 264 3.0E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 SUPERFAMILY SSF52540 52 326 2.99E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 470 489 1.1E-31 T 12-10-2018 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 95 114 1.1E-31 T 12-10-2018 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 350 366 1.1E-31 T 12-10-2018 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 493 511 1.1E-31 T 12-10-2018 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 440 459 1.1E-31 T 12-10-2018 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 3 530 3.8E-263 T 12-10-2018 IPR014251 Sporulation protease LonB Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 SMART SM00382 87 265 8.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 Gene3D G3DSA:3.40.50.300 51 124 1.5E-9 T 12-10-2018 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 Gene3D G3DSA:3.40.50.300 125 262 5.2E-22 T 12-10-2018 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 171 186 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 443 451 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 SUPERFAMILY SSF54211 349 532 1.14E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 343 532 2.2E-30 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Amet_1071 7d5891904663c6345829cdfaa5f303c2 564 Gene3D G3DSA:3.30.230.10 344 548 2.2E-56 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_3798 04f87ba1c044e19e0fdb74ab5d579a7d 520 Gene3D G3DSA:3.40.50.300 271 519 2.1E-40 T 12-10-2018 Amet_3798 04f87ba1c044e19e0fdb74ab5d579a7d 520 Pfam PF00005 ABC transporter 21 172 7.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3798 04f87ba1c044e19e0fdb74ab5d579a7d 520 SUPERFAMILY SSF52540 4 225 8.15E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3798 04f87ba1c044e19e0fdb74ab5d579a7d 520 SUPERFAMILY SSF52540 247 498 1.51E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3798 04f87ba1c044e19e0fdb74ab5d579a7d 520 Gene3D G3DSA:3.40.50.300 1 239 1.4E-57 T 12-10-2018 Amet_3798 04f87ba1c044e19e0fdb74ab5d579a7d 520 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3798 04f87ba1c044e19e0fdb74ab5d579a7d 520 SMART SM00382 290 486 2.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3798 04f87ba1c044e19e0fdb74ab5d579a7d 520 SMART SM00382 30 221 1.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3798 04f87ba1c044e19e0fdb74ab5d579a7d 520 Pfam PF00005 ABC transporter 281 437 1.8E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2016 880e8bce5c4390464aeec4f4e5ed5f83 655 Pfam PF03063 Prismane/CO dehydrogenase family 46 611 2.7E-168 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Amet_2016 880e8bce5c4390464aeec4f4e5ed5f83 655 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 13 629 2.4E-203 T 12-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Amet_2016 880e8bce5c4390464aeec4f4e5ed5f83 655 Gene3D G3DSA:3.40.50.2030 405 628 6.4E-86 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_2016 880e8bce5c4390464aeec4f4e5ed5f83 655 PIRSF PIRSF005023 1 631 6.6E-226 T 12-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Amet_2016 880e8bce5c4390464aeec4f4e5ed5f83 655 SUPERFAMILY SSF56821 14 631 1.05E-186 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Amet_2016 880e8bce5c4390464aeec4f4e5ed5f83 655 Gene3D G3DSA:3.40.50.2030 235 402 1.4E-68 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_2016 880e8bce5c4390464aeec4f4e5ed5f83 655 Gene3D G3DSA:1.20.1270.30 64 234 2.4E-64 T 12-10-2018 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Amet_2061 ee0a7582002148cd0c1d04c714f05f5b 520 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 95 116 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site Amet_2061 ee0a7582002148cd0c1d04c714f05f5b 520 Gene3D G3DSA:3.10.105.10 284 490 2.4E-121 T 12-10-2018 Amet_2061 ee0a7582002148cd0c1d04c714f05f5b 520 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 442 3.6E-84 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_2061 ee0a7582002148cd0c1d04c714f05f5b 520 Gene3D G3DSA:3.90.76.10 78 192 2.4E-121 T 12-10-2018 Amet_2061 ee0a7582002148cd0c1d04c714f05f5b 520 SUPERFAMILY SSF53850 48 519 6.83E-121 T 12-10-2018 Amet_2061 ee0a7582002148cd0c1d04c714f05f5b 520 Gene3D G3DSA:3.40.190.10 52 497 2.4E-121 T 12-10-2018 Amet_2061 ee0a7582002148cd0c1d04c714f05f5b 520 PIRSF PIRSF002741 3 520 6.2E-105 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_0288 dbf7b4ea09db2fb5a992dc2bd68717b7 216 Gene3D G3DSA:3.40.50.2300 2 123 1.5E-33 T 12-10-2018 Amet_0288 dbf7b4ea09db2fb5a992dc2bd68717b7 216 Gene3D G3DSA:1.10.10.10 124 216 3.8E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0288 dbf7b4ea09db2fb5a992dc2bd68717b7 216 SUPERFAMILY SSF46894 116 215 8.5E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_0288 dbf7b4ea09db2fb5a992dc2bd68717b7 216 SUPERFAMILY SSF52172 4 121 1.07E-36 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0288 dbf7b4ea09db2fb5a992dc2bd68717b7 216 SMART SM00862 143 214 5.6E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_0288 dbf7b4ea09db2fb5a992dc2bd68717b7 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 214 1.4E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_0288 dbf7b4ea09db2fb5a992dc2bd68717b7 216 SMART SM00448 2 111 2.1E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0288 dbf7b4ea09db2fb5a992dc2bd68717b7 216 Pfam PF00072 Response regulator receiver domain 4 111 3.3E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4502 3c7539a6178c4af946ef300442740910 224 PIRSF PIRSF000441 1 223 1.4E-82 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Amet_4502 3c7539a6178c4af946ef300442740910 224 SUPERFAMILY SSF51161 4 170 1.04E-55 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_4502 3c7539a6178c4af946ef300442740910 224 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 110 1.6E-6 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_4502 3c7539a6178c4af946ef300442740910 224 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 153 6.7E-9 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_4502 3c7539a6178c4af946ef300442740910 224 Pfam PF06426 Serine acetyltransferase, N-terminal 5 37 1.3E-4 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Amet_4502 3c7539a6178c4af946ef300442740910 224 Gene3D G3DSA:2.160.10.10 69 186 1.9E-37 T 12-10-2018 Amet_4502 3c7539a6178c4af946ef300442740910 224 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 168 1.2E-75 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Amet_4502 3c7539a6178c4af946ef300442740910 224 Gene3D G3DSA:1.10.3130.10 2 68 5.6E-27 T 12-10-2018 Amet_0748 e83dc0de4c111b9f6d2d5c6b048ab049 254 Pfam PF01797 Transposase IS200 like 13 123 9.5E-18 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_0748 e83dc0de4c111b9f6d2d5c6b048ab049 254 Gene3D G3DSA:3.30.70.1290 1 157 2.0E-42 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0748 e83dc0de4c111b9f6d2d5c6b048ab049 254 SMART SM01321 9 123 5.5E-42 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_0748 e83dc0de4c111b9f6d2d5c6b048ab049 254 SUPERFAMILY SSF143422 11 126 1.02E-26 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Pfam PF04998 RNA polymerase Rpb1, domain 5 742 950 6.7E-49 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Pfam PF05000 RNA polymerase Rpb1, domain 4 664 739 1.9E-13 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Gene3D G3DSA:2.40.50.100 938 1000 2.7E-67 T 12-10-2018 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Pfam PF04998 RNA polymerase Rpb1, domain 5 960 1100 1.9E-17 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 9 1152 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1162 18.46 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Gene3D G3DSA:1.10.274.100 547 631 2.3E-21 T 12-10-2018 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 SMART SM00663 224 503 1.2E-182 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Gene3D G3DSA:1.10.40.90 363 405 3.9E-23 T 12-10-2018 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 635 1.6E-23 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Gene3D G3DSA:1.10.1790.20 922 1099 2.7E-67 T 12-10-2018 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 474 4.8E-36 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Gene3D G3DSA:1.10.150.390 1101 1163 1.2E-29 T 12-10-2018 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 SUPERFAMILY SSF64484 5 1152 0.0 T 12-10-2018 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 331 5.4E-90 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Gene3D G3DSA:1.10.132.30 632 766 6.3E-59 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Amet_4485 7e742d5ff66907dd222b07e5c96b8fc0 1171 Gene3D G3DSA:1.10.274.100 479 546 3.4E-26 T 12-10-2018 Amet_4590 e129fcdc2f3d98d39a2f30aba85a751f 141 Gene3D G3DSA:2.40.128.20 1 141 1.6E-29 T 12-10-2018 IPR012674 Calycin Amet_4590 e129fcdc2f3d98d39a2f30aba85a751f 141 SUPERFAMILY SSF50814 1 140 2.8E-25 T 12-10-2018 IPR012674 Calycin Amet_4590 e129fcdc2f3d98d39a2f30aba85a751f 141 Pfam PF09148 Domain of unknown function (DUF1934) 7 138 2.3E-33 T 12-10-2018 IPR015231 Protein of unknown function DUF1934 Amet_1302 8cf229f6aa776c6897133b75f4d96d82 443 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 100 5.8E-31 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amet_1302 8cf229f6aa776c6897133b75f4d96d82 443 SUPERFAMILY SSF55931 106 442 3.63E-120 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amet_1302 8cf229f6aa776c6897133b75f4d96d82 443 SMART SM01230 106 354 3.0E-127 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_1302 8cf229f6aa776c6897133b75f4d96d82 443 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 441 1.8E-162 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_1302 8cf229f6aa776c6897133b75f4d96d82 443 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amet_1302 8cf229f6aa776c6897133b75f4d96d82 443 Gene3D G3DSA:3.10.20.70 3 107 9.7E-40 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_1302 8cf229f6aa776c6897133b75f4d96d82 443 SUPERFAMILY SSF54368 6 105 7.32E-33 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_1302 8cf229f6aa776c6897133b75f4d96d82 443 Gene3D G3DSA:3.30.590.10 109 443 1.8E-129 T 12-10-2018 Amet_1302 8cf229f6aa776c6897133b75f4d96d82 443 Pfam PF00120 Glutamine synthetase, catalytic domain 107 440 7.4E-131 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 Gene3D G3DSA:3.50.50.60 3 325 1.9E-118 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 445 4.2E-30 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 34 49 4.7E-69 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 4.7E-69 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 4.7E-69 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 4.7E-69 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 4.7E-69 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 4.7E-69 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 4.7E-69 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 398 413 4.7E-69 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 440 4.7E-69 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 Gene3D G3DSA:3.50.50.60 152 270 1.9E-118 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 SUPERFAMILY SSF51905 3 313 3.16E-63 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 319 2.3E-71 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PIRSF PIRSF000350 1 453 5.8E-99 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 Gene3D G3DSA:3.30.390.30 331 450 7.8E-40 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 2 455 1.8E-167 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 SUPERFAMILY SSF55424 335 455 1.48E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 4.0E-37 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 4.0E-37 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 4.0E-37 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 4.0E-37 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 4.0E-37 T 12-10-2018 Amet_2023 1e9d0c9f6a589895b01b9700d7ea8214 457 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 35 45 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Amet_3436 e6ff4d93864cb6d58d0a2eb115ef55e5 320 Pfam PF00535 Glycosyl transferase family 2 5 141 1.8E-20 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amet_3436 e6ff4d93864cb6d58d0a2eb115ef55e5 320 SUPERFAMILY SSF53448 3 145 7.31E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_3436 e6ff4d93864cb6d58d0a2eb115ef55e5 320 Gene3D G3DSA:1.25.40.10 170 296 4.6E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3436 e6ff4d93864cb6d58d0a2eb115ef55e5 320 Gene3D G3DSA:3.90.550.10 2 169 2.8E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_3436 e6ff4d93864cb6d58d0a2eb115ef55e5 320 SUPERFAMILY SSF48452 189 287 2.5E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0987 a6339f01bd6def40ba2bb020e0c30439 296 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 19 294 1.7E-68 T 12-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Amet_0987 a6339f01bd6def40ba2bb020e0c30439 296 Pfam PF02374 Anion-transporting ATPase 16 295 1.0E-75 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Amet_0987 a6339f01bd6def40ba2bb020e0c30439 296 SUPERFAMILY SSF52540 18 290 5.78E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0987 a6339f01bd6def40ba2bb020e0c30439 296 Gene3D G3DSA:3.40.50.300 7 296 1.3E-78 T 12-10-2018 Amet_1590 7438050e4b69ca3cd27ed1c231e047a5 316 SUPERFAMILY SSF50974 47 312 7.06E-54 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Amet_1590 7438050e4b69ca3cd27ed1c231e047a5 316 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 103 137 1.2E-8 T 12-10-2018 IPR011964 YVTN beta-propeller repeat Amet_1590 7438050e4b69ca3cd27ed1c231e047a5 316 Gene3D G3DSA:2.130.10.10 196 313 2.0E-16 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amet_1590 7438050e4b69ca3cd27ed1c231e047a5 316 Gene3D G3DSA:2.130.10.10 4 195 8.1E-35 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amet_1590 7438050e4b69ca3cd27ed1c231e047a5 316 Pfam PF10282 Lactonase, 7-bladed beta-propeller 8 158 6.1E-8 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller Amet_2514 e693083fa29b2484b40d85d37449e096 192 Pfam PF00929 Exonuclease 33 183 2.2E-15 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amet_2514 e693083fa29b2484b40d85d37449e096 192 Gene3D G3DSA:3.30.420.10 1 191 4.8E-39 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_2514 e693083fa29b2484b40d85d37449e096 192 SUPERFAMILY SSF53098 1 187 2.11E-26 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2514 e693083fa29b2484b40d85d37449e096 192 SMART SM00479 2 192 1.5E-13 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 Gene3D G3DSA:3.30.930.10 106 462 2.7E-115 T 12-10-2018 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 418 432 2.1E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 205 217 2.1E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 221 234 2.1E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 378 394 2.1E-13 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 463 46.105 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 4 463 4.4E-192 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 Gene3D G3DSA:2.40.50.140 1 105 3.8E-17 T 12-10-2018 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 Pfam PF00152 tRNA synthetases class II (D, K and N) 116 457 3.4E-86 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 SUPERFAMILY SSF50249 11 102 2.2E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 SUPERFAMILY SSF55681 101 461 4.11E-98 T 12-10-2018 Amet_4217 6e9d0e730ea25d7ba447e861f0649563 463 Pfam PF01336 OB-fold nucleic acid binding domain 22 98 1.7E-8 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Amet_2725 1612c36fb9ec5d76fcf5481bd8fc7321 517 Pfam PF01514 Secretory protein of YscJ/FliF family 32 222 1.3E-47 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF Amet_2725 1612c36fb9ec5d76fcf5481bd8fc7321 517 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 516 2.0E-54 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_2725 1612c36fb9ec5d76fcf5481bd8fc7321 517 PIRSF PIRSF004862 1 517 5.9E-87 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_2725 1612c36fb9ec5d76fcf5481bd8fc7321 517 Gene3D G3DSA:3.30.300.30 123 218 6.3E-9 T 12-10-2018 Amet_2725 1612c36fb9ec5d76fcf5481bd8fc7321 517 Pfam PF08345 Flagellar M-ring protein C-terminal 256 403 2.2E-20 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal Amet_2725 1612c36fb9ec5d76fcf5481bd8fc7321 517 PRINTS PR01009 Flagellar M-ring protein signature 346 370 1.1E-8 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_2725 1612c36fb9ec5d76fcf5481bd8fc7321 517 PRINTS PR01009 Flagellar M-ring protein signature 153 167 1.1E-8 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_2725 1612c36fb9ec5d76fcf5481bd8fc7321 517 PRINTS PR01009 Flagellar M-ring protein signature 198 216 1.1E-8 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 Gene3D G3DSA:1.10.460.10 162 639 1.2E-131 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 Gene3D G3DSA:2.70.20.10 223 522 1.2E-131 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 SMART SM00436 128 229 2.1E-25 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 Gene3D G3DSA:3.40.50.140 3 156 3.1E-49 T 12-10-2018 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 SMART SM00493 3 127 3.4E-15 T 12-10-2018 IPR006171 TOPRIM domain Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 Pfam PF01131 DNA topoisomerase 154 630 5.2E-102 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 SUPERFAMILY SSF56712 3 688 9.03E-149 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 Pfam PF01751 Toprim domain 5 134 3.2E-12 T 12-10-2018 IPR006171 TOPRIM domain Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 SMART SM00437 294 593 1.4E-66 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 554 568 1.9E-21 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 336 345 1.9E-21 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 433 449 1.9E-21 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 199 217 1.9E-21 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 101 114 1.9E-21 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 Gene3D G3DSA:1.10.290.10 303 447 1.2E-131 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Amet_1141 8d9bede8f6b2eaaf1cd4406fe2e77efe 775 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 331 345 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 Pfam PF02151 UvrB/uvrC motif 622 656 6.5E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 Gene3D G3DSA:3.40.50.300 413 594 4.2E-50 T 12-10-2018 Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 SMART SM00490 458 544 3.1E-19 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 SUPERFAMILY SSF46600 611 659 4.58E-12 T 12-10-2018 IPR036876 UVR domain superfamily Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 SMART SM00487 8 423 4.1E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 Pfam PF12344 Ultra-violet resistance protein B 550 592 1.1E-21 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 Gene3D G3DSA:3.40.50.300 257 412 6.8E-52 T 12-10-2018 Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 Gene3D G3DSA:4.10.860.10 603 660 6.6E-10 T 12-10-2018 Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 Pfam PF04851 Type III restriction enzyme, res subunit 12 137 2.8E-11 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 657 43.697 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 Pfam PF00271 Helicase conserved C-terminal domain 436 542 2.0E-16 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 SUPERFAMILY SSF52540 2 413 2.52E-134 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 SUPERFAMILY SSF52540 32 576 7.01E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 Gene3D G3DSA:3.40.50.300 1 235 1.2E-81 T 12-10-2018 Amet_4127 0ee062eaa3afd9598e8e16980718cd1b 664 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 655 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Amet_2496 c1ed9be59566a7fcc30c12d7a5d63cde 377 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 50 370 4.8E-114 T 12-10-2018 IPR014194 Sporulation stage III, protein AE Amet_2496 c1ed9be59566a7fcc30c12d7a5d63cde 377 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 17 370 1.3E-119 T 12-10-2018 IPR014194 Sporulation stage III, protein AE Amet_0271 9dcd5cc06f0f61d266d4421dc8e568df 554 Gene3D G3DSA:3.50.50.60 458 540 3.3E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0271 9dcd5cc06f0f61d266d4421dc8e568df 554 Gene3D G3DSA:3.50.50.60 18 150 1.0E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0271 9dcd5cc06f0f61d266d4421dc8e568df 554 Gene3D G3DSA:3.50.50.60 166 378 1.4E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0271 9dcd5cc06f0f61d266d4421dc8e568df 554 SUPERFAMILY SSF51905 36 289 6.26E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0271 9dcd5cc06f0f61d266d4421dc8e568df 554 Pfam PF06100 MCRA family 33 523 4.3E-218 T 12-10-2018 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 Amet_3205 e91f6624997bd8dc9abc05c2f39bcffd 330 Gene3D G3DSA:3.30.390.50 243 329 1.0E-26 T 12-10-2018 Amet_3205 e91f6624997bd8dc9abc05c2f39bcffd 330 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 328 9.6E-25 T 12-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 Amet_3205 e91f6624997bd8dc9abc05c2f39bcffd 330 Pfam PF03099 Biotin/lipoate A/B protein ligase family 47 150 3.7E-8 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Amet_3205 e91f6624997bd8dc9abc05c2f39bcffd 330 SUPERFAMILY SSF55681 2 242 3.2E-82 T 12-10-2018 Amet_3205 e91f6624997bd8dc9abc05c2f39bcffd 330 SUPERFAMILY SSF82649 243 329 1.1E-23 T 12-10-2018 Amet_3205 e91f6624997bd8dc9abc05c2f39bcffd 330 Gene3D G3DSA:3.30.930.10 2 242 5.4E-83 T 12-10-2018 Amet_3205 e91f6624997bd8dc9abc05c2f39bcffd 330 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 319 8.3E-110 T 12-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 Amet_3322 4c7e0aed1ee7dd398d623a0e4032a150 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 577 4.2E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3322 4c7e0aed1ee7dd398d623a0e4032a150 578 Gene3D G3DSA:3.30.565.10 434 578 9.9E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3322 4c7e0aed1ee7dd398d623a0e4032a150 578 Pfam PF06580 Histidine kinase 369 450 4.2E-26 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Amet_3322 4c7e0aed1ee7dd398d623a0e4032a150 578 SUPERFAMILY SSF55874 428 577 5.24E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0317 e56b1b9dad02cef5ddc2a1d28a3bf8b6 129 Gene3D G3DSA:3.10.129.10 1 129 1.0E-38 T 12-10-2018 Amet_0317 e56b1b9dad02cef5ddc2a1d28a3bf8b6 129 SUPERFAMILY SSF54637 3 124 1.14E-18 T 12-10-2018 IPR029069 HotDog domain superfamily Amet_0317 e56b1b9dad02cef5ddc2a1d28a3bf8b6 129 Pfam PF03061 Thioesterase superfamily 23 87 9.4E-6 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 Pfam PF02934 GatB/GatE catalytic domain 5 289 6.1E-116 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 SUPERFAMILY SSF89095 297 401 2.01E-29 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 473 2.3E-185 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 Pfam PF02637 GatB domain 328 473 2.1E-50 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 Gene3D G3DSA:1.10.150.380 297 412 2.9E-36 T 12-10-2018 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 SUPERFAMILY SSF55931 3 296 2.62E-120 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 1 474 38.592 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 SMART SM00845 328 473 8.2E-72 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Amet_3387 99bcb30c080aa16964237937402f7bd3 476 Gene3D G3DSA:1.10.10.410 413 475 3.5E-24 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Amet_4029 716ea4291e08b4a27acf33f7ad334cd1 232 PRINTS PR00127 Clp protease catalytic subunit P signature 80 97 1.3E-7 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_4029 716ea4291e08b4a27acf33f7ad334cd1 232 PRINTS PR00127 Clp protease catalytic subunit P signature 156 175 1.3E-7 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_4029 716ea4291e08b4a27acf33f7ad334cd1 232 PRINTS PR00127 Clp protease catalytic subunit P signature 49 69 1.3E-7 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Amet_4029 716ea4291e08b4a27acf33f7ad334cd1 232 Gene3D G3DSA:3.90.226.10 3 196 2.7E-45 T 12-10-2018 Amet_4029 716ea4291e08b4a27acf33f7ad334cd1 232 SUPERFAMILY SSF52096 3 182 4.52E-47 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_4029 716ea4291e08b4a27acf33f7ad334cd1 232 Pfam PF00574 Clp protease 34 180 4.3E-30 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 4 147 3.0E-45 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 Pfam PF01316 Arginine repressor, DNA binding domain 2 66 1.2E-23 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 61.478 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 Gene3D G3DSA:1.10.10.10 3 65 2.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 SUPERFAMILY SSF46785 2 67 1.61E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 SUPERFAMILY SSF55252 79 145 2.62E-18 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 Gene3D G3DSA:3.30.1360.40 71 148 3.1E-27 T 12-10-2018 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 PRINTS PR01467 Bacterial arginine repressor signature 87 100 2.8E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 PRINTS PR01467 Bacterial arginine repressor signature 36 51 2.8E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 PRINTS PR01467 Bacterial arginine repressor signature 20 33 2.8E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 PRINTS PR01467 Bacterial arginine repressor signature 117 132 2.8E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 86 142 4.0E-8 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Amet_2510 1de708f3e545b15e8f335c92be4e7c9b 149 Pfam PF02863 Arginine repressor, C-terminal domain 79 145 3.2E-27 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 Gene3D G3DSA:1.20.1270.10 479 608 4.2E-24 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 575 2.8E-284 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 SUPERFAMILY SSF100920 356 512 6.67E-63 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 Gene3D G3DSA:2.60.34.10 349 477 8.0E-58 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 Gene3D G3DSA:3.90.640.10 200 281 2.6E-144 T 12-10-2018 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 SUPERFAMILY SSF53067 1 159 1.5E-59 T 12-10-2018 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 SUPERFAMILY SSF53067 163 354 3.52E-65 T 12-10-2018 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 603 36.942 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 SUPERFAMILY SSF100934 479 578 5.23E-13 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 PRINTS PR00301 70kDa heat shock protein signature 306 322 6.9E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 PRINTS PR00301 70kDa heat shock protein signature 441 457 6.9E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 PRINTS PR00301 70kDa heat shock protein signature 174 184 6.9E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 PRINTS PR00301 70kDa heat shock protein signature 337 357 6.9E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.9E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 PRINTS PR00301 70kDa heat shock protein signature 114 134 6.9E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.9E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.9E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 PRINTS PR00301 70kDa heat shock protein signature 360 379 6.9E-81 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 Pfam PF00012 Hsp70 protein 4 576 4.1E-246 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 Gene3D G3DSA:3.30.420.40 5 348 2.6E-144 T 12-10-2018 Amet_3048 4abfbd6c7456858353f13f426c094ede 614 Gene3D G3DSA:3.30.420.40 161 339 2.6E-144 T 12-10-2018 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 Gene3D G3DSA:1.25.40.10 106 419 1.2E-39 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 Pfam PF13181 Tetratricopeptide repeat 195 221 0.19 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 SUPERFAMILY SSF48452 121 406 3.8E-29 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 Pfam PF13424 Tetratricopeptide repeat 265 331 1.5E-9 T 12-10-2018 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 SMART SM00028 228 261 380.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 SMART SM00028 262 295 0.46 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 SMART SM00028 369 402 79.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 SMART SM00028 194 227 0.44 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 SMART SM00028 301 334 3.5E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3061 bea4529b335d55582ddf1ce6f36de6bc 421 SMART SM00028 160 193 180.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 113 2.3E-41 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Gene3D G3DSA:3.20.20.70 510 814 8.8E-273 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Gene3D G3DSA:1.10.472.90 815 939 8.8E-273 T 12-10-2018 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 SUPERFAMILY SSF51246 342 460 1.2E-34 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Pfam PF00682 HMGL-like 531 802 1.6E-32 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 SUPERFAMILY SSF52440 4 117 6.12E-42 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Pfam PF02436 Conserved carboxylase domain 825 1024 2.2E-72 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Gene3D G3DSA:1.10.10.2790 940 975 8.8E-273 T 12-10-2018 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Gene3D G3DSA:2.40.50.100 1068 1145 1.7E-24 T 12-10-2018 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 PIRSF PIRSF001594 1 1145 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 158 172 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 SUPERFAMILY SSF89000 830 1007 3.77E-56 T 12-10-2018 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Pfam PF00364 Biotin-requiring enzyme 1078 1142 2.3E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 327 1.4E-79 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Pfam PF02785 Biotin carboxylase C-terminal domain 347 454 7.0E-30 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 8 1143 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 SUPERFAMILY SSF51230 1068 1143 7.72E-21 T 12-10-2018 IPR011053 Single hybrid motif Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Gene3D G3DSA:3.30.470.130 1 462 4.2E-195 T 12-10-2018 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 Gene3D G3DSA:3.10.600.10 507 1056 8.8E-273 T 12-10-2018 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 SMART SM00878 347 454 2.3E-45 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 SUPERFAMILY SSF51569 522 833 1.08E-82 T 12-10-2018 Amet_0579 2f6fac2ab28396a6e6b630064bc59a76 1146 SUPERFAMILY SSF56059 88 331 4.95E-67 T 12-10-2018 Amet_1556 2c5f5764d499ce352a391812e3dcbbf5 442 Gene3D G3DSA:2.40.50.100 63 283 1.2E-42 T 12-10-2018 Amet_1556 2c5f5764d499ce352a391812e3dcbbf5 442 Pfam PF13437 HlyD family secretion protein 247 347 3.0E-11 T 12-10-2018 Amet_1556 2c5f5764d499ce352a391812e3dcbbf5 442 Pfam PF13533 Biotin-lipoyl like 75 111 1.4E-5 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Amet_1556 2c5f5764d499ce352a391812e3dcbbf5 442 Gene3D G3DSA:1.10.287.470 97 246 1.2E-42 T 12-10-2018 Amet_1556 2c5f5764d499ce352a391812e3dcbbf5 442 Gene3D G3DSA:2.40.420.20 48 425 1.2E-42 T 12-10-2018 Amet_1556 2c5f5764d499ce352a391812e3dcbbf5 442 Gene3D G3DSA:2.40.30.170 52 364 1.2E-42 T 12-10-2018 Amet_3620 465f5f87cdfd0b179b7a54f576b4a2a6 201 SUPERFAMILY SSF53254 1 200 5.89E-61 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Amet_3620 465f5f87cdfd0b179b7a54f576b4a2a6 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 196 2.9E-59 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amet_3620 465f5f87cdfd0b179b7a54f576b4a2a6 201 SMART SM00855 3 157 3.0E-20 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amet_3620 465f5f87cdfd0b179b7a54f576b4a2a6 201 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Amet_3620 465f5f87cdfd0b179b7a54f576b4a2a6 201 Gene3D G3DSA:3.40.50.1240 1 201 1.0E-63 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Amet_3620 465f5f87cdfd0b179b7a54f576b4a2a6 201 PIRSF PIRSF000709 2 184 8.1E-22 T 12-10-2018 Amet_2606 08fab835c69349aac95074f8a99c2096 650 Pfam PF13476 AAA domain 7 233 1.0E-19 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain Amet_2606 08fab835c69349aac95074f8a99c2096 650 SUPERFAMILY SSF52540 5 136 3.87E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2606 08fab835c69349aac95074f8a99c2096 650 Gene3D G3DSA:3.40.50.300 3 294 2.2E-22 T 12-10-2018 Amet_2677 587f84718856835f361470649c1d1130 152 Pfam PF02576 RimP N-terminal domain 11 83 1.4E-29 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Amet_2677 587f84718856835f361470649c1d1130 152 Gene3D G3DSA:3.30.300.70 1 80 3.4E-31 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily Amet_2677 587f84718856835f361470649c1d1130 152 Pfam PF17384 RimP C-terminal SH3 domain 86 152 3.7E-10 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Amet_2677 587f84718856835f361470649c1d1130 152 SUPERFAMILY SSF75420 2 83 2.09E-25 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily Amet_2677 587f84718856835f361470649c1d1130 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 152 24.064 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Amet_2677 587f84718856835f361470649c1d1130 152 Gene3D G3DSA:2.30.30.180 89 150 6.0E-10 T 12-10-2018 Amet_2677 587f84718856835f361470649c1d1130 152 SUPERFAMILY SSF74942 84 152 5.23E-15 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Amet_2511 0f08c6dcd7ee9b6db6899ff7df193b74 569 Gene3D G3DSA:3.40.50.300 267 562 2.5E-56 T 12-10-2018 Amet_2511 0f08c6dcd7ee9b6db6899ff7df193b74 569 Gene3D G3DSA:3.40.50.300 1 263 1.2E-49 T 12-10-2018 Amet_2511 0f08c6dcd7ee9b6db6899ff7df193b74 569 PIRSF PIRSF003128 1 566 7.4E-176 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Amet_2511 0f08c6dcd7ee9b6db6899ff7df193b74 569 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 521 1.2E-20 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Amet_2511 0f08c6dcd7ee9b6db6899ff7df193b74 569 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 561 1.7E-169 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Amet_2511 0f08c6dcd7ee9b6db6899ff7df193b74 569 SUPERFAMILY SSF52540 1 519 2.09E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2999 c5d2df9da712c1c8c56806b6a40061d1 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 87 2.1E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_2999 c5d2df9da712c1c8c56806b6a40061d1 462 SUPERFAMILY SSF46785 22 89 1.68E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2999 c5d2df9da712c1c8c56806b6a40061d1 462 Gene3D G3DSA:3.40.640.10 140 356 2.3E-54 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_2999 c5d2df9da712c1c8c56806b6a40061d1 462 Gene3D G3DSA:3.90.1150.10 104 458 2.3E-54 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_2999 c5d2df9da712c1c8c56806b6a40061d1 462 Pfam PF00155 Aminotransferase class I and II 155 452 3.8E-24 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_2999 c5d2df9da712c1c8c56806b6a40061d1 462 SMART SM00345 28 87 2.6E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_2999 c5d2df9da712c1c8c56806b6a40061d1 462 Gene3D G3DSA:1.10.10.10 16 88 3.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2999 c5d2df9da712c1c8c56806b6a40061d1 462 SUPERFAMILY SSF53383 96 460 1.29E-64 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2997 0595945d7b2e8f31f243b9416d35d83e 110 PIRSF PIRSF003203 1 110 7.2E-30 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Amet_2997 0595945d7b2e8f31f243b9416d35d83e 110 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 105 1.2E-16 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Amet_4802 53bc5dfbbb6d1a62631cdc371eb53f22 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 22 8.0E-5 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4802 53bc5dfbbb6d1a62631cdc371eb53f22 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.253 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4802 53bc5dfbbb6d1a62631cdc371eb53f22 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 1.9E-18 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4802 53bc5dfbbb6d1a62631cdc371eb53f22 44 Pfam PF00468 Ribosomal protein L34 2 44 4.5E-21 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4802 53bc5dfbbb6d1a62631cdc371eb53f22 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_0357 e8506e4e748ee03c2846fddc8fdba6ca 279 SUPERFAMILY SSF143842 50 277 7.72E-48 T 12-10-2018 IPR036209 YwmB-like superfamily Amet_0357 e8506e4e748ee03c2846fddc8fdba6ca 279 Pfam PF08680 TATA-box binding 116 279 2.3E-31 T 12-10-2018 IPR014794 TATA-box binding Amet_0357 e8506e4e748ee03c2846fddc8fdba6ca 279 Gene3D G3DSA:3.30.360.40 207 279 5.4E-17 T 12-10-2018 Amet_1290 b0bf06bd79f3a128f43cde3061900f1e 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 1.1E-106 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_1290 b0bf06bd79f3a128f43cde3061900f1e 425 PIRSF PIRSF006066 1 425 4.7E-128 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_1290 b0bf06bd79f3a128f43cde3061900f1e 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 421 4.2E-126 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_3206 8bdd79ba336c07679e44f3054f2ef513 337 SUPERFAMILY SSF51395 37 335 1.22E-56 T 12-10-2018 Amet_3206 8bdd79ba336c07679e44f3054f2ef513 337 PIRSF PIRSF000138 187 337 4.0E-60 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Amet_3206 8bdd79ba336c07679e44f3054f2ef513 337 PIRSF PIRSF000138 2 190 2.2E-12 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Amet_3206 8bdd79ba336c07679e44f3054f2ef513 337 Gene3D G3DSA:3.20.20.70 35 336 4.3E-73 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3206 8bdd79ba336c07679e44f3054f2ef513 337 Pfam PF01070 FMN-dependent dehydrogenase 36 179 1.8E-11 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Amet_3206 8bdd79ba336c07679e44f3054f2ef513 337 Pfam PF01070 FMN-dependent dehydrogenase 192 336 3.2E-60 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Amet_3062 63f25f35a673008babc3d1bab8b5e583 293 SUPERFAMILY SSF56281 33 283 4.98E-53 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_3062 63f25f35a673008babc3d1bab8b5e583 293 SMART SM00849 45 242 1.8E-4 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3062 63f25f35a673008babc3d1bab8b5e583 293 Gene3D G3DSA:3.60.15.10 34 286 9.1E-74 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_3062 63f25f35a673008babc3d1bab8b5e583 293 Pfam PF00753 Metallo-beta-lactamase superfamily 43 241 1.1E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_4498 025ef029d12eab19653c448b69b8f3a9 257 Gene3D G3DSA:3.30.1360.170 7 229 2.8E-66 T 12-10-2018 Amet_4498 025ef029d12eab19653c448b69b8f3a9 257 Pfam PF02511 Thymidylate synthase complementing protein 8 222 7.0E-69 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Amet_4498 025ef029d12eab19653c448b69b8f3a9 257 SUPERFAMILY SSF69796 4 237 7.59E-63 T 12-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Amet_4498 025ef029d12eab19653c448b69b8f3a9 257 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 6 227 2.1E-56 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Amet_4498 025ef029d12eab19653c448b69b8f3a9 257 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 5 236 30.397 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Amet_2018 2ba7cdf55610c1554390031958a8e817 558 Gene3D G3DSA:3.30.1510.10 131 249 2.5E-209 T 12-10-2018 Amet_2018 2ba7cdf55610c1554390031958a8e817 558 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 330 341 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_2018 2ba7cdf55610c1554390031958a8e817 558 Gene3D G3DSA:3.40.50.300 8 436 2.5E-209 T 12-10-2018 Amet_2018 2ba7cdf55610c1554390031958a8e817 558 Pfam PF01268 Formate--tetrahydrofolate ligase 4 558 3.7E-271 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_2018 2ba7cdf55610c1554390031958a8e817 558 Gene3D G3DSA:3.10.410.10 445 534 7.1E-38 T 12-10-2018 Amet_2018 2ba7cdf55610c1554390031958a8e817 558 SUPERFAMILY SSF52540 6 556 4.32E-245 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2018 2ba7cdf55610c1554390031958a8e817 558 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 3 558 49.064 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_2018 2ba7cdf55610c1554390031958a8e817 558 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 105 115 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_1452 89c487263b85b3615d396ddba3dfd459 192 SUPERFAMILY SSF55729 1 172 1.0E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1452 89c487263b85b3615d396ddba3dfd459 192 Gene3D G3DSA:3.40.630.30 1 153 6.9E-14 T 12-10-2018 Amet_1452 89c487263b85b3615d396ddba3dfd459 192 Pfam PF00583 Acetyltransferase (GNAT) family 52 123 2.0E-8 T 12-10-2018 IPR000182 GNAT domain Amet_2656 95597d30aefdd6e5b4a0385bdc160964 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 1.0E-37 T 12-10-2018 IPR007347 Sporulation stage V, protein S Amet_2656 95597d30aefdd6e5b4a0385bdc160964 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 2.8E-40 T 12-10-2018 IPR007347 Sporulation stage V, protein S Amet_2656 95597d30aefdd6e5b4a0385bdc160964 86 Gene3D G3DSA:3.30.110.20 1 86 1.3E-36 T 12-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 Amet_0980 f071926fb95872d38b612dfb2c80a3bd 67 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 4 61 1.7E-25 T 12-10-2018 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide Amet_0980 f071926fb95872d38b612dfb2c80a3bd 67 Gene3D G3DSA:1.10.3910.10 2 67 6.6E-26 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Amet_0980 f071926fb95872d38b612dfb2c80a3bd 67 Pfam PF08984 Domain of unknown function (DUF1858) 5 57 1.0E-18 T 12-10-2018 IPR015077 Domain of unknown function DUF1858 Amet_0980 f071926fb95872d38b612dfb2c80a3bd 67 SUPERFAMILY SSF140683 1 65 7.45E-17 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Amet_0889 f807a3d1261a256c2eb801bcd13a5415 301 Pfam PF00892 EamA-like transporter family 8 139 8.1E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_0889 f807a3d1261a256c2eb801bcd13a5415 301 Pfam PF00892 EamA-like transporter family 151 283 2.6E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_0889 f807a3d1261a256c2eb801bcd13a5415 301 SUPERFAMILY SSF103481 41 141 1.23E-9 T 12-10-2018 Amet_0889 f807a3d1261a256c2eb801bcd13a5415 301 SUPERFAMILY SSF103481 186 286 2.09E-11 T 12-10-2018 Amet_0891 7ab6f472b3f081571b79e2a61af83f43 259 Gene3D G3DSA:3.40.50.1000 6 249 2.7E-77 T 12-10-2018 IPR023214 HAD superfamily Amet_0891 7ab6f472b3f081571b79e2a61af83f43 259 SUPERFAMILY SSF56784 3 256 9.34E-63 T 12-10-2018 IPR036412 HAD-like superfamily Amet_0891 7ab6f472b3f081571b79e2a61af83f43 259 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 250 6.7E-59 T 12-10-2018 Amet_0891 7ab6f472b3f081571b79e2a61af83f43 259 Gene3D G3DSA:3.30.1240.10 83 182 2.7E-77 T 12-10-2018 Amet_0891 7ab6f472b3f081571b79e2a61af83f43 259 ProSitePatterns PS01229 Hypothetical cof family signature 2. 207 229 - T 12-10-2018 Amet_0891 7ab6f472b3f081571b79e2a61af83f43 259 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 226 4.8E-25 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Amet_0891 7ab6f472b3f081571b79e2a61af83f43 259 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 251 7.0E-58 T 12-10-2018 IPR000150 Cof family GO:0016787 Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 Gene3D G3DSA:3.40.50.720 1 182 5.3E-78 T 12-10-2018 Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 44.343 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 Gene3D G3DSA:1.10.3730.40 183 333 8.6E-69 T 12-10-2018 Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 SUPERFAMILY SSF48179 184 329 9.01E-68 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 5.3E-76 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 329 3.5E-140 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 SUPERFAMILY SSF51735 3 183 3.2E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 9.1E-65 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 PIRSF PIRSF000116 1 205 2.2E-45 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amet_3402 11deb406b39711a3bf6a7bf404d4937a 333 PIRSF PIRSF000116 202 332 1.2E-16 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Amet_3477 fb0a450ce8cdb2c7057c3aa3c0f0cf63 206 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 6.8E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_3477 fb0a450ce8cdb2c7057c3aa3c0f0cf63 206 SUPERFAMILY SSF54523 18 132 1.33E-5 T 12-10-2018 Amet_3477 fb0a450ce8cdb2c7057c3aa3c0f0cf63 206 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_3477 fb0a450ce8cdb2c7057c3aa3c0f0cf63 206 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 38 1.2E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_2946 e92e44c6de8de209a23cedc827366abd 475 Pfam PF08323 Starch synthase catalytic domain 2 236 1.2E-83 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Amet_2946 e92e44c6de8de209a23cedc827366abd 475 Gene3D G3DSA:3.40.50.2000 250 458 6.4E-180 T 12-10-2018 Amet_2946 e92e44c6de8de209a23cedc827366abd 475 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 474 1.4E-175 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Amet_2946 e92e44c6de8de209a23cedc827366abd 475 Hamap MF_00484 Glycogen synthase [glgA]. 1 474 45.451 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Amet_2946 e92e44c6de8de209a23cedc827366abd 475 Pfam PF00534 Glycosyl transferases group 1 291 448 7.9E-14 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Amet_2946 e92e44c6de8de209a23cedc827366abd 475 Gene3D G3DSA:3.40.50.2000 3 472 6.4E-180 T 12-10-2018 Amet_2946 e92e44c6de8de209a23cedc827366abd 475 SUPERFAMILY SSF53756 3 474 2.76E-123 T 12-10-2018 Amet_4540 fb4cdc477bb355f2892c005744ef3675 313 Gene3D G3DSA:3.40.50.300 38 245 4.4E-85 T 12-10-2018 Amet_4540 fb4cdc477bb355f2892c005744ef3675 313 Gene3D G3DSA:1.10.287.130 246 308 3.4E-5 T 12-10-2018 Amet_4540 fb4cdc477bb355f2892c005744ef3675 313 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 10 305 9.8E-112 T 12-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_4540 fb4cdc477bb355f2892c005744ef3675 313 Pfam PF03308 ArgK protein 16 276 1.3E-98 T 12-10-2018 Amet_4540 fb4cdc477bb355f2892c005744ef3675 313 SMART SM00382 42 186 2.5E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4540 fb4cdc477bb355f2892c005744ef3675 313 SUPERFAMILY SSF52540 3 306 2.54E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0923 e982840a25b084da68b66fa8849f4bad 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 164 1.5E-17 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Amet_0923 e982840a25b084da68b66fa8849f4bad 347 Gene3D G3DSA:3.90.650.10 171 346 1.9E-71 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_0923 e982840a25b084da68b66fa8849f4bad 347 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 336 6.1E-140 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0923 e982840a25b084da68b66fa8849f4bad 347 Gene3D G3DSA:3.30.1330.10 5 170 4.0E-68 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_0923 e982840a25b084da68b66fa8849f4bad 347 SUPERFAMILY SSF55326 6 169 1.03E-49 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_0923 e982840a25b084da68b66fa8849f4bad 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 342 1.8E-34 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Amet_0923 e982840a25b084da68b66fa8849f4bad 347 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 6 342 47.379 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0923 e982840a25b084da68b66fa8849f4bad 347 SUPERFAMILY SSF56042 172 343 1.08E-56 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 595 704 2.5E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 SMART SM00387 594 706 7.8E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 Gene3D G3DSA:2.60.120.260 43 199 6.6E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 Gene3D G3DSA:1.10.287.130 433 537 2.6E-18 T 12-10-2018 Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 661 5.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 647 5.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 PRINTS PR00344 Bacterial sensor protein C-terminal signature 666 684 5.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 703 5.8E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 Gene3D G3DSA:3.30.565.10 540 706 3.2E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 SUPERFAMILY SSF47384 458 540 1.06E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 SUPERFAMILY SSF55874 529 704 1.02E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 Pfam PF00512 His Kinase A (phospho-acceptor) domain 476 538 1.1E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 SUPERFAMILY SSF49785 49 191 5.1E-9 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 Pfam PF07695 7TM diverse intracellular signalling 209 418 1.7E-30 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Amet_1771 9809747fad75a290a170ba7a97ac1c06 706 SMART SM00388 472 539 3.4E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4374 704d75dcba05bec360de07310c060b30 225 SMART SM00646 30 146 1.4E-19 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_4374 704d75dcba05bec360de07310c060b30 225 SUPERFAMILY SSF53187 4 151 1.19E-27 T 12-10-2018 Amet_4374 704d75dcba05bec360de07310c060b30 225 Gene3D G3DSA:3.40.630.40 1 150 6.4E-29 T 12-10-2018 Amet_4374 704d75dcba05bec360de07310c060b30 225 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 140 4.6E-25 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_0408 704d75dcba05bec360de07310c060b30 225 SMART SM00646 30 146 1.4E-19 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_0408 704d75dcba05bec360de07310c060b30 225 SUPERFAMILY SSF53187 4 151 1.19E-27 T 12-10-2018 Amet_0408 704d75dcba05bec360de07310c060b30 225 Gene3D G3DSA:3.40.630.40 1 150 6.4E-29 T 12-10-2018 Amet_0408 704d75dcba05bec360de07310c060b30 225 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 140 4.6E-25 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_1945 704d75dcba05bec360de07310c060b30 225 SMART SM00646 30 146 1.4E-19 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_1945 704d75dcba05bec360de07310c060b30 225 SUPERFAMILY SSF53187 4 151 1.19E-27 T 12-10-2018 Amet_1945 704d75dcba05bec360de07310c060b30 225 Gene3D G3DSA:3.40.630.40 1 150 6.4E-29 T 12-10-2018 Amet_1945 704d75dcba05bec360de07310c060b30 225 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 140 4.6E-25 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_2183 57296fe305f557da5cc93048840f3218 551 Pfam PF00912 Transglycosylase 61 232 3.4E-66 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2183 57296fe305f557da5cc93048840f3218 551 Gene3D G3DSA:3.40.710.10 261 547 3.1E-98 T 12-10-2018 Amet_2183 57296fe305f557da5cc93048840f3218 551 Gene3D G3DSA:1.10.3810.10 52 250 2.4E-78 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2183 57296fe305f557da5cc93048840f3218 551 SUPERFAMILY SSF53955 49 262 3.66E-75 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Amet_2183 57296fe305f557da5cc93048840f3218 551 Pfam PF00905 Penicillin binding protein transpeptidase domain 329 543 7.4E-23 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amet_2183 57296fe305f557da5cc93048840f3218 551 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 72 539 1.4E-161 T 12-10-2018 Amet_2183 57296fe305f557da5cc93048840f3218 551 SUPERFAMILY SSF56601 215 538 1.48E-85 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_0710 2045f82a7844b0888491fe287c2cd392 186 Pfam PF10646 Sporulation and spore germination 52 166 4.3E-18 T 12-10-2018 IPR019606 GerMN domain Amet_0710 2045f82a7844b0888491fe287c2cd392 186 SMART SM00909 86 170 8.0E-18 T 12-10-2018 IPR019606 GerMN domain Amet_4420 f2ec3cf438f4765f7f1214dc98e8dacc 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 471 638 5.0E-50 T 12-10-2018 IPR000160 GGDEF domain Amet_4420 f2ec3cf438f4765f7f1214dc98e8dacc 650 SMART SM00267 464 640 8.4E-63 T 12-10-2018 IPR000160 GGDEF domain Amet_4420 f2ec3cf438f4765f7f1214dc98e8dacc 650 SUPERFAMILY SSF49785 44 139 9.92E-6 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Amet_4420 f2ec3cf438f4765f7f1214dc98e8dacc 650 Gene3D G3DSA:3.30.70.270 460 642 4.0E-56 T 12-10-2018 Amet_4420 f2ec3cf438f4765f7f1214dc98e8dacc 650 SUPERFAMILY SSF55073 480 640 9.03E-48 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_4420 f2ec3cf438f4765f7f1214dc98e8dacc 650 Pfam PF07695 7TM diverse intracellular signalling 207 417 3.8E-36 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Amet_4420 f2ec3cf438f4765f7f1214dc98e8dacc 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 636 1.4E-48 T 12-10-2018 IPR000160 GGDEF domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 SUPERFAMILY SSF55785 16 128 1.74E-11 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4433 4631b418fc368bb8a1d989352490569e 784 Pfam PF00512 His Kinase A (phospho-acceptor) domain 522 595 2.0E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4433 4631b418fc368bb8a1d989352490569e 784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 642 750 8.1E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00091 12 77 0.011 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00091 264 335 1.5 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00091 141 208 5.1E-4 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00091 392 458 1.3E-4 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 SUPERFAMILY SSF55874 584 751 3.93E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4433 4631b418fc368bb8a1d989352490569e 784 SUPERFAMILY SSF55785 249 378 5.41E-17 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4433 4631b418fc368bb8a1d989352490569e 784 Pfam PF00989 PAS fold 393 502 8.3E-9 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_4433 4631b418fc368bb8a1d989352490569e 784 Gene3D G3DSA:3.30.450.20 9 127 1.2E-18 T 12-10-2018 Amet_4433 4631b418fc368bb8a1d989352490569e 784 Gene3D G3DSA:3.30.450.20 132 249 8.6E-14 T 12-10-2018 Amet_4433 4631b418fc368bb8a1d989352490569e 784 Gene3D G3DSA:3.30.450.20 254 377 5.0E-23 T 12-10-2018 Amet_4433 4631b418fc368bb8a1d989352490569e 784 SUPERFAMILY SSF55785 126 250 1.93E-13 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00388 521 595 5.7E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4433 4631b418fc368bb8a1d989352490569e 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 731 1.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4433 4631b418fc368bb8a1d989352490569e 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 706 1.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4433 4631b418fc368bb8a1d989352490569e 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 737 750 1.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4433 4631b418fc368bb8a1d989352490569e 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 692 1.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4433 4631b418fc368bb8a1d989352490569e 784 SUPERFAMILY SSF47384 509 595 4.32E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00086 340 380 24.0 T 12-10-2018 IPR001610 PAC motif Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00086 212 252 370.0 T 12-10-2018 IPR001610 PAC motif Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00086 89 129 98.0 T 12-10-2018 IPR001610 PAC motif Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00086 465 505 0.073 T 12-10-2018 IPR001610 PAC motif Amet_4433 4631b418fc368bb8a1d989352490569e 784 Gene3D G3DSA:1.10.287.130 502 595 7.3E-21 T 12-10-2018 Amet_4433 4631b418fc368bb8a1d989352490569e 784 SUPERFAMILY SSF55785 377 503 1.92E-17 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4433 4631b418fc368bb8a1d989352490569e 784 Pfam PF13426 PAS domain 287 379 2.7E-8 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 Pfam PF13426 PAS domain 22 128 1.3E-9 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 Pfam PF13426 PAS domain 155 251 5.8E-6 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 Gene3D G3DSA:3.30.565.10 596 756 1.1E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4433 4631b418fc368bb8a1d989352490569e 784 Gene3D G3DSA:3.30.450.20 378 501 1.2E-17 T 12-10-2018 Amet_4433 4631b418fc368bb8a1d989352490569e 784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 133 2.2E-9 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 260 384 6.9E-18 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 259 2.5E-15 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 390 510 2.2E-11 T 12-10-2018 IPR000014 PAS domain Amet_4433 4631b418fc368bb8a1d989352490569e 784 SMART SM00387 641 753 6.6E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2599 1b9882f9cee468fbc872fec36912da58 263 Pfam PF13392 HNH endonuclease 183 225 7.7E-17 T 12-10-2018 IPR003615 HNH nuclease Amet_2599 1b9882f9cee468fbc872fec36912da58 263 SUPERFAMILY SSF54060 161 224 6.0E-9 T 12-10-2018 Amet_3027 dc786c76ffc5d07ac4c47efc402df296 133 SUPERFAMILY SSF53927 2 131 3.68E-47 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amet_3027 dc786c76ffc5d07ac4c47efc402df296 133 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 129 8.1E-45 T 12-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 Amet_3027 dc786c76ffc5d07ac4c47efc402df296 133 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Amet_3027 dc786c76ffc5d07ac4c47efc402df296 133 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 4.0E-17 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Amet_3027 dc786c76ffc5d07ac4c47efc402df296 133 Gene3D G3DSA:3.40.140.10 1 133 8.0E-53 T 12-10-2018 Amet_2951 5eac06d803d0ce81742904dd7058e506 464 SUPERFAMILY SSF141523 321 454 4.84E-6 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amet_2951 5eac06d803d0ce81742904dd7058e506 464 Gene3D G3DSA:2.40.440.10 320 464 5.1E-8 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amet_2951 5eac06d803d0ce81742904dd7058e506 464 Pfam PF03734 L,D-transpeptidase catalytic domain 322 456 5.5E-11 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Amet_2151 038d744f5fa9f45cfc29127be8ef4b4c 208 Pfam PF13835 Domain of unknown function (DUF4194) 23 181 3.2E-35 T 12-10-2018 IPR025449 Protein of unknown function DUF4194 Amet_2156 59e48410c4f5ec8fde6087e2995e3066 166 SMART SM00471 36 152 5.9E-7 T 12-10-2018 IPR003607 HD/PDEase domain Amet_2156 59e48410c4f5ec8fde6087e2995e3066 166 Pfam PF01966 HD domain 41 128 2.2E-10 T 12-10-2018 IPR006674 HD domain Amet_2156 59e48410c4f5ec8fde6087e2995e3066 166 SUPERFAMILY SSF109604 8 153 6.81E-27 T 12-10-2018 Amet_2156 59e48410c4f5ec8fde6087e2995e3066 166 Gene3D G3DSA:1.10.3210.10 16 159 1.2E-24 T 12-10-2018 Amet_2156 59e48410c4f5ec8fde6087e2995e3066 166 TIGRFAM TIGR00277 HDIG: HDIG domain 41 103 2.1E-9 T 12-10-2018 IPR006675 HDIG domain Amet_3139 7726d57bf6a3db2de3b7b01f48cd7859 277 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 273 1.2E-85 T 12-10-2018 IPR003797 DegV Amet_3139 7726d57bf6a3db2de3b7b01f48cd7859 277 SUPERFAMILY SSF82549 2 277 1.96E-86 T 12-10-2018 Amet_3139 7726d57bf6a3db2de3b7b01f48cd7859 277 Gene3D G3DSA:3.40.50.10170 1 152 4.6E-55 T 12-10-2018 Amet_3139 7726d57bf6a3db2de3b7b01f48cd7859 277 Gene3D G3DSA:3.30.1180.10 154 277 2.5E-35 T 12-10-2018 Amet_3139 7726d57bf6a3db2de3b7b01f48cd7859 277 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 1 276 5.5E-98 T 12-10-2018 IPR003797 DegV Amet_3039 a75e3daf9a65633d809b7d9835744c9e 379 SUPERFAMILY SSF56219 143 378 1.18E-43 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amet_3039 a75e3daf9a65633d809b7d9835744c9e 379 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 168 369 1.0E-14 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Amet_3039 a75e3daf9a65633d809b7d9835744c9e 379 Gene3D G3DSA:3.60.10.10 150 379 1.2E-56 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amet_0086 24143edcc1777d741909a1f424503be9 202 Pfam PF00578 AhpC/TSA family 65 177 1.1E-14 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amet_0086 24143edcc1777d741909a1f424503be9 202 SUPERFAMILY SSF52833 65 201 4.8E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_0086 24143edcc1777d741909a1f424503be9 202 Gene3D G3DSA:3.40.30.10 29 201 3.3E-30 T 12-10-2018 Amet_4206 70427ab8457b4c9379dd01dcf1bd878b 310 Gene3D G3DSA:3.40.50.300 1 241 3.1E-70 T 12-10-2018 Amet_4206 70427ab8457b4c9379dd01dcf1bd878b 310 SMART SM00382 27 210 1.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4206 70427ab8457b4c9379dd01dcf1bd878b 310 SUPERFAMILY SSF52540 2 222 1.3E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4206 70427ab8457b4c9379dd01dcf1bd878b 310 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4206 70427ab8457b4c9379dd01dcf1bd878b 310 Pfam PF00005 ABC transporter 19 161 3.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4206 70427ab8457b4c9379dd01dcf1bd878b 310 Pfam PF13732 Domain of unknown function (DUF4162) 215 303 5.0E-9 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 Amet_3500 785ef499fdf23c8f870934cb9ef2254f 137 SUPERFAMILY SSF102712 2 129 4.84E-29 T 12-10-2018 Amet_3500 785ef499fdf23c8f870934cb9ef2254f 137 Gene3D G3DSA:3.40.140.10 2 137 3.3E-37 T 12-10-2018 Amet_3500 785ef499fdf23c8f870934cb9ef2254f 137 SMART SM00232 2 131 1.5E-13 T 12-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 Amet_3500 785ef499fdf23c8f870934cb9ef2254f 137 Pfam PF14464 Prokaryotic homologs of the JAB domain 8 113 8.4E-24 T 12-10-2018 IPR028090 JAB domain, prokaryotic Amet_0024 f1e8c317f8616024969875687d82db4c 426 Gene3D G3DSA:1.10.287.40 1 105 6.1E-28 T 12-10-2018 Amet_0024 f1e8c317f8616024969875687d82db4c 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 42.656 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amet_0024 f1e8c317f8616024969875687d82db4c 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 1.4E-173 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amet_0024 f1e8c317f8616024969875687d82db4c 426 SUPERFAMILY SSF46589 1 113 2.46E-29 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Amet_0024 f1e8c317f8616024969875687d82db4c 426 SUPERFAMILY SSF55681 117 418 4.11E-102 T 12-10-2018 Amet_0024 f1e8c317f8616024969875687d82db4c 426 PIRSF PIRSF001529 1 426 8.2E-185 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amet_0024 f1e8c317f8616024969875687d82db4c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 1.2E-31 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amet_0024 f1e8c317f8616024969875687d82db4c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 1.2E-31 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amet_0024 f1e8c317f8616024969875687d82db4c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 1.2E-31 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amet_0024 f1e8c317f8616024969875687d82db4c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 1.2E-31 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amet_0024 f1e8c317f8616024969875687d82db4c 426 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.2E-31 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Amet_0024 f1e8c317f8616024969875687d82db4c 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.1E-29 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Amet_0024 f1e8c317f8616024969875687d82db4c 426 Gene3D G3DSA:3.30.930.10 106 426 5.5E-126 T 12-10-2018 Amet_0024 f1e8c317f8616024969875687d82db4c 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 399 9.7E-37 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2029 345fe00587fa0180158612434e0c09bf 123 Gene3D G3DSA:2.40.50.100 2 123 2.4E-46 T 12-10-2018 Amet_2029 345fe00587fa0180158612434e0c09bf 123 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 46 75 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Amet_2029 345fe00587fa0180158612434e0c09bf 123 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 3 123 34.548 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Amet_2029 345fe00587fa0180158612434e0c09bf 123 SUPERFAMILY SSF51230 2 121 1.21E-40 T 12-10-2018 IPR011053 Single hybrid motif Amet_2029 345fe00587fa0180158612434e0c09bf 123 Pfam PF01597 Glycine cleavage H-protein 6 121 2.5E-43 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Amet_2029 345fe00587fa0180158612434e0c09bf 123 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 122 2.5E-45 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Amet_3216 5671154d412a05651a43a1a99b9e6db1 412 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 411 6.5E-163 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Amet_3216 5671154d412a05651a43a1a99b9e6db1 412 PIRSF PIRSF015658 1 412 8.4E-173 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Amet_3216 5671154d412a05651a43a1a99b9e6db1 412 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 22 406 1.3E-152 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Amet_4535 5671154d412a05651a43a1a99b9e6db1 412 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 411 6.5E-163 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Amet_4535 5671154d412a05651a43a1a99b9e6db1 412 PIRSF PIRSF015658 1 412 8.4E-173 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Amet_4535 5671154d412a05651a43a1a99b9e6db1 412 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 22 406 1.3E-152 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Amet_1404 6b8b330fc83a8e3cd9c3ccfff7c165e7 294 Gene3D G3DSA:3.30.70.1350 201 288 2.5E-25 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Amet_1404 6b8b330fc83a8e3cd9c3ccfff7c165e7 294 SUPERFAMILY SSF160240 205 283 9.55E-20 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Amet_1404 6b8b330fc83a8e3cd9c3ccfff7c165e7 294 SUPERFAMILY SSF161111 5 202 7.06E-56 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Amet_1404 6b8b330fc83a8e3cd9c3ccfff7c165e7 294 Pfam PF01545 Cation efflux family 8 201 8.1E-45 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Amet_1404 6b8b330fc83a8e3cd9c3ccfff7c165e7 294 Pfam PF16916 Dimerisation domain of Zinc Transporter 206 283 3.5E-20 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Amet_1404 6b8b330fc83a8e3cd9c3ccfff7c165e7 294 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 284 5.2E-73 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Amet_1404 6b8b330fc83a8e3cd9c3ccfff7c165e7 294 Gene3D G3DSA:1.20.1510.10 4 200 1.4E-57 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Amet_4443 2f6b28d9da06d621663bc4e4d2ee39f9 142 SUPERFAMILY SSF52161 1 139 3.27E-58 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Amet_4443 2f6b28d9da06d621663bc4e4d2ee39f9 142 Gene3D G3DSA:3.90.1180.10 1 142 8.9E-61 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Amet_4443 2f6b28d9da06d621663bc4e4d2ee39f9 142 PIRSF PIRSF002181 1 142 6.9E-52 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Amet_4443 2f6b28d9da06d621663bc4e4d2ee39f9 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Amet_4443 2f6b28d9da06d621663bc4e4d2ee39f9 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 7.3E-62 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4443 2f6b28d9da06d621663bc4e4d2ee39f9 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.555 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Amet_4443 2f6b28d9da06d621663bc4e4d2ee39f9 142 Pfam PF00572 Ribosomal protein L13 14 138 7.0E-56 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Amet_2024 fbc5ad956e62b258836ec886d144cf87 257 Gene3D G3DSA:3.40.50.300 3 255 1.9E-47 T 12-10-2018 Amet_2024 fbc5ad956e62b258836ec886d144cf87 257 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 233 5.3E-16 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_2024 fbc5ad956e62b258836ec886d144cf87 257 SUPERFAMILY SSF52540 1 253 4.03E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2024 fbc5ad956e62b258836ec886d144cf87 257 PIRSF PIRSF005647 3 257 3.8E-66 T 12-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type Amet_1775 3cd40c41574b607e26acca53d03e0925 256 Pfam PF00892 EamA-like transporter family 116 251 2.1E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_1775 3cd40c41574b607e26acca53d03e0925 256 Pfam PF00892 EamA-like transporter family 3 102 2.1E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_1775 3cd40c41574b607e26acca53d03e0925 256 SUPERFAMILY SSF103481 153 254 3.79E-10 T 12-10-2018 Amet_1775 3cd40c41574b607e26acca53d03e0925 256 SUPERFAMILY SSF103481 4 105 5.1E-14 T 12-10-2018 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Pfam PF06165 Glycosyltransferase family 36 2072 2311 1.7E-83 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Pfam PF06165 Glycosyltransferase family 36 1569 1817 2.3E-72 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 SUPERFAMILY SSF74650 1560 1818 1.54E-69 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Pfam PF10091 Putative glucoamylase 1308 1519 6.6E-20 T 12-10-2018 IPR019282 Domain of unknown function DUF2329 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2342 2769 4.0E-135 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 SUPERFAMILY SSF74650 2049 2313 2.35E-82 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Gene3D G3DSA:1.50.10.140 973 1122 1.0E-16 T 12-10-2018 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Gene3D G3DSA:1.50.10.140 1211 1529 2.2E-19 T 12-10-2018 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Gene3D G3DSA:2.60.420.10 2351 2828 5.0E-204 T 12-10-2018 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 SUPERFAMILY SSF48208 2318 2842 3.74E-96 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Gene3D G3DSA:2.70.98.40 1553 1850 1.2E-79 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Gene3D G3DSA:2.70.98.40 2050 2347 1.0E-100 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 SMART SM01068 1547 1608 4.7E-21 T 12-10-2018 IPR009342 Putative carbohydrate binding domain Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 SMART SM01068 2049 2114 5.9E-33 T 12-10-2018 IPR009342 Putative carbohydrate binding domain Amet_3537 dde19d86667eadc02861418ff5d48a97 2843 Gene3D G3DSA:1.50.10.10 2356 2769 5.0E-204 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amet_0833 47996dca932491a10148ea66a6a69447 94 Hamap MF_00580 10 kDa chaperonin [groS]. 2 94 26.133 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amet_0833 47996dca932491a10148ea66a6a69447 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 1.4E-33 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amet_0833 47996dca932491a10148ea66a6a69447 94 PRINTS PR00297 10kDa chaperonin signature 3 18 2.0E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amet_0833 47996dca932491a10148ea66a6a69447 94 PRINTS PR00297 10kDa chaperonin signature 25 46 2.0E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amet_0833 47996dca932491a10148ea66a6a69447 94 PRINTS PR00297 10kDa chaperonin signature 80 93 2.0E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amet_0833 47996dca932491a10148ea66a6a69447 94 PRINTS PR00297 10kDa chaperonin signature 59 71 2.0E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amet_0833 47996dca932491a10148ea66a6a69447 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Amet_0833 47996dca932491a10148ea66a6a69447 94 SUPERFAMILY SSF50129 1 94 9.14E-33 T 12-10-2018 IPR011032 GroES-like superfamily Amet_0833 47996dca932491a10148ea66a6a69447 94 SMART SM00883 2 93 4.5E-50 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Amet_0833 47996dca932491a10148ea66a6a69447 94 Gene3D G3DSA:2.30.33.40 1 94 2.3E-36 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Amet_0890 c477e4c09fee0c11c43f159e112cf9fd 109 Gene3D G3DSA:2.40.50.140 1 109 9.2E-29 T 12-10-2018 Amet_0890 c477e4c09fee0c11c43f159e112cf9fd 109 SUPERFAMILY SSF50249 2 108 1.23E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_0890 c477e4c09fee0c11c43f159e112cf9fd 109 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 4 108 5.8E-46 T 12-10-2018 IPR008231 Probable chaperone CsaA Amet_0890 c477e4c09fee0c11c43f159e112cf9fd 109 Pfam PF01588 Putative tRNA binding domain 12 107 9.9E-14 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Amet_4448 03b08bd91e31237b2b3d2730e97c2f82 113 Gene3D G3DSA:3.90.1030.10 2 113 2.0E-49 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4448 03b08bd91e31237b2b3d2730e97c2f82 113 TIGRFAM TIGR00059 L17: ribosomal protein bL17 5 113 1.6E-47 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4448 03b08bd91e31237b2b3d2730e97c2f82 113 Pfam PF01196 Ribosomal protein L17 17 113 8.3E-41 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4448 03b08bd91e31237b2b3d2730e97c2f82 113 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 2 113 27.904 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4448 03b08bd91e31237b2b3d2730e97c2f82 113 SUPERFAMILY SSF64263 3 113 3.14E-47 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4448 03b08bd91e31237b2b3d2730e97c2f82 113 ProSitePatterns PS01167 Ribosomal protein L17 signature. 31 53 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4717 584b305bb8a8200b37fe0dbbb55622d1 666 Gene3D G3DSA:1.10.287.950 308 619 1.8E-56 T 12-10-2018 Amet_4717 584b305bb8a8200b37fe0dbbb55622d1 666 SMART SM00283 390 665 1.2E-48 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_4717 584b305bb8a8200b37fe0dbbb55622d1 666 Gene3D G3DSA:3.30.450.20 121 170 3.2E-17 T 12-10-2018 Amet_4717 584b305bb8a8200b37fe0dbbb55622d1 666 SUPERFAMILY SSF58104 333 664 4.05E-62 T 12-10-2018 Amet_4717 584b305bb8a8200b37fe0dbbb55622d1 666 SUPERFAMILY SSF103190 118 179 4.45E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_4717 584b305bb8a8200b37fe0dbbb55622d1 666 Gene3D G3DSA:3.30.450.20 171 281 3.2E-17 T 12-10-2018 Amet_4717 584b305bb8a8200b37fe0dbbb55622d1 666 Pfam PF02743 Cache domain 66 269 1.1E-25 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_4717 584b305bb8a8200b37fe0dbbb55622d1 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 608 4.7E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3521 798d6ff399f6d37f76e2ae6819d533b8 534 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 22 510 8.8E-181 T 12-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Amet_3521 798d6ff399f6d37f76e2ae6819d533b8 534 Gene3D G3DSA:3.40.50.1980 198 300 2.3E-32 T 12-10-2018 Amet_3521 798d6ff399f6d37f76e2ae6819d533b8 534 Gene3D G3DSA:3.40.50.1980 301 517 2.5E-79 T 12-10-2018 Amet_3521 798d6ff399f6d37f76e2ae6819d533b8 534 Gene3D G3DSA:3.40.50.1980 54 194 4.9E-46 T 12-10-2018 Amet_3521 798d6ff399f6d37f76e2ae6819d533b8 534 SUPERFAMILY SSF53807 5 521 8.18E-163 T 12-10-2018 Amet_3521 798d6ff399f6d37f76e2ae6819d533b8 534 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 7 517 3.4E-203 T 12-10-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Amet_3521 798d6ff399f6d37f76e2ae6819d533b8 534 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 53 502 1.1E-128 T 12-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Amet_3521 798d6ff399f6d37f76e2ae6819d533b8 534 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 142 156 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Amet_3521 798d6ff399f6d37f76e2ae6819d533b8 534 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 72 79 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Amet_4703 e96198b6b6cabfd2b2b23be5137fd3e3 328 Gene3D G3DSA:3.40.190.10 43 326 1.1E-110 T 12-10-2018 Amet_4703 e96198b6b6cabfd2b2b23be5137fd3e3 328 Pfam PF16868 NMT1-like family 43 327 1.3E-99 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amet_4703 e96198b6b6cabfd2b2b23be5137fd3e3 328 Gene3D G3DSA:3.40.190.10 128 265 1.1E-110 T 12-10-2018 Amet_4703 e96198b6b6cabfd2b2b23be5137fd3e3 328 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 328 9.6E-121 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amet_4703 e96198b6b6cabfd2b2b23be5137fd3e3 328 SUPERFAMILY SSF53850 38 326 9.97E-84 T 12-10-2018 Amet_4799 ed58b601a88535f2c9f9bb279ba30c7f 220 Pfam PF02096 60Kd inner membrane protein 22 210 1.0E-65 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amet_4799 ed58b601a88535f2c9f9bb279ba30c7f 220 PRINTS PR01900 YidC translocation/secretion protein signature 144 159 1.3E-8 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amet_4799 ed58b601a88535f2c9f9bb279ba30c7f 220 PRINTS PR01900 YidC translocation/secretion protein signature 7 23 1.3E-8 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amet_4799 ed58b601a88535f2c9f9bb279ba30c7f 220 PRINTS PR01900 YidC translocation/secretion protein signature 165 189 1.3E-8 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amet_4799 ed58b601a88535f2c9f9bb279ba30c7f 220 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 21 210 1.3E-66 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0678 4b1ada6d6e1123d402b981b168497402 743 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amet_0678 4b1ada6d6e1123d402b981b168497402 743 Gene3D G3DSA:3.40.50.10180 362 572 2.0E-139 T 12-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 Amet_0678 4b1ada6d6e1123d402b981b168497402 743 SUPERFAMILY SSF52283 3 132 1.66E-34 T 12-10-2018 Amet_0678 4b1ada6d6e1123d402b981b168497402 743 SUPERFAMILY SSF51735 104 286 1.37E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0678 4b1ada6d6e1123d402b981b168497402 743 SUPERFAMILY SSF82544 328 741 3.01E-132 T 12-10-2018 Amet_0678 4b1ada6d6e1123d402b981b168497402 743 Gene3D G3DSA:3.40.1480.10 573 737 2.0E-139 T 12-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily Amet_0678 4b1ada6d6e1123d402b981b168497402 743 Pfam PF05161 MOFRL family 631 736 4.3E-36 T 12-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 Amet_0678 4b1ada6d6e1123d402b981b168497402 743 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 286 7.8E-60 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amet_0678 4b1ada6d6e1123d402b981b168497402 743 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amet_0678 4b1ada6d6e1123d402b981b168497402 743 Gene3D G3DSA:3.40.50.720 99 286 3.3E-115 T 12-10-2018 Amet_0678 4b1ada6d6e1123d402b981b168497402 743 Pfam PF13660 Domain of unknown function (DUF4147) 335 555 1.0E-71 T 12-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 Amet_0678 4b1ada6d6e1123d402b981b168497402 743 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 317 1.8E-31 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Amet_0678 4b1ada6d6e1123d402b981b168497402 743 Gene3D G3DSA:3.40.50.720 5 313 3.3E-115 T 12-10-2018 Amet_2603 cd71db06d6e25a8716f02068f030dee9 246 Gene3D G3DSA:3.60.15.10 4 245 2.2E-29 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_2603 cd71db06d6e25a8716f02068f030dee9 246 SUPERFAMILY SSF56281 1 241 3.41E-29 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_2603 cd71db06d6e25a8716f02068f030dee9 246 SMART SM00849 11 182 0.007 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_2603 cd71db06d6e25a8716f02068f030dee9 246 Pfam PF12706 Beta-lactamase superfamily domain 45 207 5.7E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_0072 cf55dfd7d39b7acb9b3da22b153bef6f 202 Pfam PF13847 Methyltransferase domain 45 145 9.0E-10 T 12-10-2018 IPR025714 Methyltransferase domain Amet_0072 cf55dfd7d39b7acb9b3da22b153bef6f 202 Gene3D G3DSA:3.40.50.150 3 202 7.1E-68 T 12-10-2018 Amet_0072 cf55dfd7d39b7acb9b3da22b153bef6f 202 SUPERFAMILY SSF53335 17 166 3.99E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0072 cf55dfd7d39b7acb9b3da22b153bef6f 202 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 23 145 5.0E-38 T 12-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 Amet_0503 7b06e56cdb944f6173aa3df3bd8caaab 300 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 89 299 4.0E-64 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Amet_0503 7b06e56cdb944f6173aa3df3bd8caaab 300 SUPERFAMILY SSF56529 85 299 5.1E-70 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amet_0503 7b06e56cdb944f6173aa3df3bd8caaab 300 Gene3D G3DSA:3.90.850.10 84 300 3.8E-77 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 SUPERFAMILY SSF63520 792 900 9.68E-12 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 Pfam PF00874 PRD domain 451 537 2.2E-20 T 12-10-2018 IPR011608 PRD domain GO:0006355 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 Pfam PF00874 PRD domain 810 895 3.7E-10 T 12-10-2018 IPR011608 PRD domain GO:0006355 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 Gene3D G3DSA:3.40.50.510 548 683 3.6E-39 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 Pfam PF03610 PTS system fructose IIA component 552 663 5.3E-11 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 SUPERFAMILY SSF53062 551 669 1.24E-19 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 SUPERFAMILY SSF52540 75 347 2.47E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4197 c120e4be5dee9e824e226573d30ff139 909 Gene3D G3DSA:3.40.50.300 71 259 2.9E-41 T 12-10-2018 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 Gene3D G3DSA:1.10.1790.10 441 541 3.7E-24 T 12-10-2018 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 SUPERFAMILY SSF63520 441 538 1.27E-23 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 SUPERFAMILY SSF46785 8 62 2.22E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4197 c120e4be5dee9e824e226573d30ff139 909 SMART SM00382 106 256 1.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4197 c120e4be5dee9e824e226573d30ff139 909 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 179 194 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 Pfam PF00158 Sigma-54 interaction domain 84 248 7.5E-46 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_4197 c120e4be5dee9e824e226573d30ff139 909 Gene3D G3DSA:1.10.1790.10 801 898 5.1E-8 T 12-10-2018 Amet_0638 31d5df5da97a311ef2906e06370959dc 169 SUPERFAMILY SSF52833 18 168 3.69E-49 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_0638 31d5df5da97a311ef2906e06370959dc 169 Gene3D G3DSA:3.40.30.10 86 168 5.9E-31 T 12-10-2018 Amet_0638 31d5df5da97a311ef2906e06370959dc 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 168 7.9E-48 T 12-10-2018 Amet_0638 31d5df5da97a311ef2906e06370959dc 169 Gene3D G3DSA:1.10.10.1590 17 85 1.4E-12 T 12-10-2018 Amet_0638 31d5df5da97a311ef2906e06370959dc 169 PIRSF PIRSF000216 2 169 2.1E-52 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_0692 1d7b89ffc0240b0681214a8b59b0aac8 395 SUPERFAMILY SSF89796 3 394 2.22E-142 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily Amet_0692 1d7b89ffc0240b0681214a8b59b0aac8 395 Gene3D G3DSA:3.40.50.10540 5 389 2.1E-147 T 12-10-2018 IPR023606 CoA-transferase family III domain superfamily Amet_0692 1d7b89ffc0240b0681214a8b59b0aac8 395 Pfam PF02515 CoA-transferase family III 5 371 7.5E-138 T 12-10-2018 IPR003673 CoA-transferase family III GO:0003824 Amet_0692 1d7b89ffc0240b0681214a8b59b0aac8 395 Gene3D G3DSA:3.30.1540.10 231 322 2.1E-147 T 12-10-2018 Amet_4168 047b33b7550f1b6797ae06ddf07c9af8 406 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 293 377 1.1E-5 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain Amet_4168 047b33b7550f1b6797ae06ddf07c9af8 406 Pfam PF00149 Calcineurin-like phosphoesterase 1 159 1.1E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amet_4168 047b33b7550f1b6797ae06ddf07c9af8 406 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 268 4.4E-60 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 Amet_4168 047b33b7550f1b6797ae06ddf07c9af8 406 Gene3D G3DSA:3.60.21.10 1 288 2.1E-73 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_4168 047b33b7550f1b6797ae06ddf07c9af8 406 SUPERFAMILY SSF56300 1 347 3.11E-57 T 12-10-2018 Amet_1736 5234b6214d7757acbb4a9c88afd58b87 442 SUPERFAMILY SSF53850 19 437 1.68E-67 T 12-10-2018 Amet_1736 5234b6214d7757acbb4a9c88afd58b87 442 Gene3D G3DSA:3.40.190.10 49 392 2.3E-82 T 12-10-2018 Amet_1736 5234b6214d7757acbb4a9c88afd58b87 442 Gene3D G3DSA:3.40.190.10 166 427 2.3E-82 T 12-10-2018 Amet_1736 5234b6214d7757acbb4a9c88afd58b87 442 Pfam PF13416 Bacterial extracellular solute-binding protein 64 371 3.7E-39 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Pfam PF04060 Putative Fe-S cluster 46 78 1.6E-15 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 173 184 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Gene3D G3DSA:3.30.70.20 200 268 1.7E-13 T 12-10-2018 Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Gene3D G3DSA:3.30.70.20 136 197 1.5E-13 T 12-10-2018 Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 SUPERFAMILY SSF54862 148 326 1.34E-29 T 12-10-2018 Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 6 195 28.866 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Pfam PF14697 4Fe-4S dicluster domain 272 326 1.8E-12 T 12-10-2018 Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 309 320 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Gene3D G3DSA:3.30.70.20 301 328 1.0E-6 T 12-10-2018 Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Pfam PF12838 4Fe-4S dicluster domain 143 187 2.4E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Pfam PF12838 4Fe-4S dicluster domain 217 261 4.3E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Gene3D G3DSA:3.20.20.20 37 130 3.6E-13 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 Gene3D G3DSA:3.30.70.20 269 300 8.8E-7 T 12-10-2018 Amet_2285 b0bfddaa224b8c2af21291ab38529112 328 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 204 3.4E-30 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Amet_1754 26153dc3af43d61b9cc1b8daf20086db 744 SUPERFAMILY SSF52540 108 450 5.41E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1754 26153dc3af43d61b9cc1b8daf20086db 744 SUPERFAMILY SSF52540 113 300 7.23E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1754 26153dc3af43d61b9cc1b8daf20086db 744 Gene3D G3DSA:3.40.50.300 79 275 2.7E-5 T 12-10-2018 Amet_0119 74567fb0fa62afb3ca424a0da3dd8e06 145 Gene3D G3DSA:3.30.70.1290 16 115 1.3E-19 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0119 74567fb0fa62afb3ca424a0da3dd8e06 145 SUPERFAMILY SSF143422 23 81 1.92E-7 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_2250 8022fbb79a643c46edc35bef141f4650 444 SUPERFAMILY SSF53098 90 402 1.37E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2250 8022fbb79a643c46edc35bef141f4650 444 Pfam PF13546 DDE superfamily endonuclease 46 251 4.8E-13 T 12-10-2018 IPR038721 Transposase IS701-like, DDE domain Amet_1284 bcbd07c2fac3afd009c46e66d8970193 385 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 211 376 1.6E-38 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_1284 bcbd07c2fac3afd009c46e66d8970193 385 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 378 3.0E-88 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_1284 bcbd07c2fac3afd009c46e66d8970193 385 Gene3D G3DSA:3.30.300.210 226 380 1.5E-42 T 12-10-2018 IPR038501 Spore germination GerAC superfamily Amet_3126 8f513573f53d54a5c30c2b1d1c4687a2 414 Pfam PF13490 Putative zinc-finger 3 36 2.5E-6 T 12-10-2018 IPR027383 Putative zinc-finger Amet_3126 8f513573f53d54a5c30c2b1d1c4687a2 414 Pfam PF14257 Domain of unknown function (DUF4349) 147 400 2.4E-51 T 12-10-2018 IPR025645 Domain of unknown function DUF4349 Amet_0605 4ebd35061f2d3697f7c8b622fff391a0 267 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 167 262 3.3E-14 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Amet_0605 4ebd35061f2d3697f7c8b622fff391a0 267 SUPERFAMILY SSF55447 164 262 7.2E-14 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Amet_0605 4ebd35061f2d3697f7c8b622fff391a0 267 Gene3D G3DSA:3.30.390.50 166 263 1.7E-10 T 12-10-2018 Amet_0605 4ebd35061f2d3697f7c8b622fff391a0 267 SMART SM01092 166 262 2.2E-8 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Amet_0605 4ebd35061f2d3697f7c8b622fff391a0 267 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 158 8.2E-21 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Amet_0605 4ebd35061f2d3697f7c8b622fff391a0 267 SUPERFAMILY SSF56176 6 159 2.73E-25 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_0605 4ebd35061f2d3697f7c8b622fff391a0 267 Gene3D G3DSA:3.30.465.10 4 163 4.4E-24 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_2548 e4ec66a74f869be989f748c4ef4afb7f 322 Pfam PF05036 Sporulation related domain 215 272 2.4E-8 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Amet_2548 e4ec66a74f869be989f748c4ef4afb7f 322 Pfam PF05036 Sporulation related domain 180 247 1.7E-17 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Amet_2548 e4ec66a74f869be989f748c4ef4afb7f 322 SUPERFAMILY SSF55846 12 155 4.06E-23 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amet_2548 e4ec66a74f869be989f748c4ef4afb7f 322 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 22 150 2.1E-17 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amet_2548 e4ec66a74f869be989f748c4ef4afb7f 322 Gene3D G3DSA:3.40.80.10 6 170 4.1E-24 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amet_2548 e4ec66a74f869be989f748c4ef4afb7f 322 Gene3D G3DSA:3.30.70.1070 180 250 3.2E-28 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Amet_2548 e4ec66a74f869be989f748c4ef4afb7f 322 SMART SM00644 13 149 0.0031 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amet_2548 e4ec66a74f869be989f748c4ef4afb7f 322 SUPERFAMILY SSF110997 177 247 1.09E-18 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Amet_3331 9c4e50068d7f615c120a5dfa524632f9 552 SUPERFAMILY SSF53850 214 550 2.17E-77 T 12-10-2018 Amet_3331 9c4e50068d7f615c120a5dfa524632f9 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 257 547 1.4E-59 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_3331 9c4e50068d7f615c120a5dfa524632f9 552 Gene3D G3DSA:3.40.190.10 207 456 2.3E-58 T 12-10-2018 Amet_3331 9c4e50068d7f615c120a5dfa524632f9 552 SUPERFAMILY SSF53850 51 205 1.38E-24 T 12-10-2018 Amet_3331 9c4e50068d7f615c120a5dfa524632f9 552 PIRSF PIRSF002741 209 549 2.8E-59 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_3331 9c4e50068d7f615c120a5dfa524632f9 552 PIRSF PIRSF002741 42 205 1.1E-21 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_3331 9c4e50068d7f615c120a5dfa524632f9 552 Gene3D G3DSA:3.10.105.10 457 551 1.9E-13 T 12-10-2018 Amet_3331 9c4e50068d7f615c120a5dfa524632f9 552 Gene3D G3DSA:3.10.105.10 26 177 3.9E-26 T 12-10-2018 Amet_3563 f027027e97acf8b2a27ba3c57ab7d155 247 SMART SM00448 2 116 1.2E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3563 f027027e97acf8b2a27ba3c57ab7d155 247 Pfam PF00072 Response regulator receiver domain 4 115 4.1E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3563 f027027e97acf8b2a27ba3c57ab7d155 247 Pfam PF04397 LytTr DNA-binding domain 143 232 2.5E-18 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_3563 f027027e97acf8b2a27ba3c57ab7d155 247 SUPERFAMILY SSF52172 2 133 1.05E-24 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3563 f027027e97acf8b2a27ba3c57ab7d155 247 Gene3D G3DSA:3.40.50.2300 2 133 6.5E-24 T 12-10-2018 Amet_3563 f027027e97acf8b2a27ba3c57ab7d155 247 Gene3D G3DSA:2.40.50.40 134 202 5.6E-15 T 12-10-2018 Amet_3563 f027027e97acf8b2a27ba3c57ab7d155 247 SMART SM00850 141 239 1.5E-25 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_0602 217894f07b7c7336cf580efd58980902 627 Gene3D G3DSA:1.10.287.130 384 466 1.8E-12 T 12-10-2018 Amet_0602 217894f07b7c7336cf580efd58980902 627 SUPERFAMILY SSF55874 469 618 2.62E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0602 217894f07b7c7336cf580efd58980902 627 Gene3D G3DSA:3.40.190.10 114 216 2.8E-56 T 12-10-2018 Amet_0602 217894f07b7c7336cf580efd58980902 627 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 617 5.3E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0602 217894f07b7c7336cf580efd58980902 627 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 617 1.7E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0602 217894f07b7c7336cf580efd58980902 627 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 563 1.7E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0602 217894f07b7c7336cf580efd58980902 627 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 577 1.7E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0602 217894f07b7c7336cf580efd58980902 627 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 598 1.7E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0602 217894f07b7c7336cf580efd58980902 627 Gene3D G3DSA:3.40.190.10 32 307 2.8E-56 T 12-10-2018 Amet_0602 217894f07b7c7336cf580efd58980902 627 Gene3D G3DSA:3.30.565.10 468 620 3.4E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0602 217894f07b7c7336cf580efd58980902 627 SUPERFAMILY SSF53850 36 259 1.45E-18 T 12-10-2018 Amet_0602 217894f07b7c7336cf580efd58980902 627 SUPERFAMILY SSF47384 393 466 1.1E-8 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_0602 217894f07b7c7336cf580efd58980902 627 Pfam PF09084 NMT1/THI5 like 40 254 1.4E-41 T 12-10-2018 IPR015168 SsuA/THI5-like Amet_0602 217894f07b7c7336cf580efd58980902 627 SMART SM00387 508 620 2.1E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0602 217894f07b7c7336cf580efd58980902 627 SMART SM00388 398 468 4.8E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 159 330 5.2E-48 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 SUPERFAMILY SSF142984 352 435 1.06E-25 T 12-10-2018 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 SUPERFAMILY SSF54862 542 594 1.16E-15 T 12-10-2018 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Gene3D G3DSA:3.40.50.11540 164 342 5.2E-81 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Pfam PF10531 SLBB domain 356 402 5.5E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 SUPERFAMILY SSF142019 111 351 1.44E-95 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 578 589 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 453 464 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Gene3D G3DSA:3.40.30.10 4 101 1.9E-27 T 12-10-2018 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Gene3D G3DSA:3.10.20.600 343 437 5.5E-34 T 12-10-2018 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 SUPERFAMILY SSF52833 4 95 3.35E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Pfam PF00037 4Fe-4S binding domain 573 593 1.1E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Pfam PF00037 4Fe-4S binding domain 542 563 1.5E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 SUPERFAMILY SSF140490 436 538 5.36E-40 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 441 525 3.1E-34 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Gene3D G3DSA:3.30.70.20 541 596 1.8E-15 T 12-10-2018 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 3 80 2.5E-7 T 12-10-2018 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 Gene3D G3DSA:1.20.1440.230 438 540 9.7E-36 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4108 3255727038acb6f001d1aa584d0d76b5 596 SMART SM00928 440 485 8.1E-25 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_2322 893c31590c28f7feebeff6c8b63057a5 460 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 453 3.2E-159 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Amet_2322 893c31590c28f7feebeff6c8b63057a5 460 PRINTS PR00175 Sodium/alanine symporter signature 363 385 4.2E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Amet_2322 893c31590c28f7feebeff6c8b63057a5 460 PRINTS PR00175 Sodium/alanine symporter signature 313 331 4.2E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Amet_2322 893c31590c28f7feebeff6c8b63057a5 460 PRINTS PR00175 Sodium/alanine symporter signature 218 237 4.2E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Amet_2322 893c31590c28f7feebeff6c8b63057a5 460 PRINTS PR00175 Sodium/alanine symporter signature 422 442 4.2E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Amet_2322 893c31590c28f7feebeff6c8b63057a5 460 PRINTS PR00175 Sodium/alanine symporter signature 190 208 4.2E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Amet_2322 893c31590c28f7feebeff6c8b63057a5 460 PRINTS PR00175 Sodium/alanine symporter signature 99 121 4.2E-53 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Amet_2322 893c31590c28f7feebeff6c8b63057a5 460 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 99 114 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Amet_2322 893c31590c28f7feebeff6c8b63057a5 460 Pfam PF01235 Sodium:alanine symporter family 63 458 3.4E-148 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Amet_0154 6ddbb9bca75544f9bf6f4c78cb79e5dc 273 Gene3D G3DSA:1.10.10.10 2 74 4.8E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0154 6ddbb9bca75544f9bf6f4c78cb79e5dc 273 Pfam PF00156 Phosphoribosyl transferase domain 113 242 1.5E-16 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amet_0154 6ddbb9bca75544f9bf6f4c78cb79e5dc 273 Gene3D G3DSA:3.40.50.2020 77 272 2.1E-56 T 12-10-2018 Amet_0154 6ddbb9bca75544f9bf6f4c78cb79e5dc 273 Pfam PF09182 Bacterial purine repressor, N-terminal 5 74 2.1E-31 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 Amet_0154 6ddbb9bca75544f9bf6f4c78cb79e5dc 273 SUPERFAMILY SSF46785 3 75 7.62E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0154 6ddbb9bca75544f9bf6f4c78cb79e5dc 273 SUPERFAMILY SSF53271 85 258 1.56E-37 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_0154 6ddbb9bca75544f9bf6f4c78cb79e5dc 273 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 4 265 1.5E-111 T 12-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 Amet_0154 6ddbb9bca75544f9bf6f4c78cb79e5dc 273 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 13 74 3.0E-29 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 Amet_4150 a63662113f2217f7103fab72c080f95a 620 Pfam PF00361 Proton-conducting membrane transporter 133 427 2.9E-53 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4150 a63662113f2217f7103fab72c080f95a 620 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 1.6E-7 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4150 a63662113f2217f7103fab72c080f95a 620 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 1.6E-7 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3045 05685225b4e609a99a7fcdf91a403ea7 254 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 9 251 2.7E-57 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Amet_3045 05685225b4e609a99a7fcdf91a403ea7 254 Pfam PF04452 RNA methyltransferase 19 246 5.4E-67 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Amet_3045 05685225b4e609a99a7fcdf91a403ea7 254 Gene3D G3DSA:3.40.1280.10 1 252 2.9E-82 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amet_3045 05685225b4e609a99a7fcdf91a403ea7 254 PIRSF PIRSF015601 1 251 1.7E-63 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Amet_3045 05685225b4e609a99a7fcdf91a403ea7 254 SUPERFAMILY SSF88697 3 71 7.46E-12 T 12-10-2018 IPR015947 PUA-like superfamily Amet_3045 05685225b4e609a99a7fcdf91a403ea7 254 SUPERFAMILY SSF75217 75 251 1.53E-48 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Amet_2918 08d82858aae662b6b1823828c75d91f3 277 Pfam PF01578 Cytochrome C assembly protein 64 267 5.3E-57 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Amet_2918 08d82858aae662b6b1823828c75d91f3 277 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 41 270 4.2E-83 T 12-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Amet_0221 370e7bb21c9e42e2a2f63ef11401cfea 378 Gene3D G3DSA:3.40.50.450 1 283 8.7E-88 T 12-10-2018 Amet_0221 370e7bb21c9e42e2a2f63ef11401cfea 378 SUPERFAMILY SSF102405 77 279 3.79E-32 T 12-10-2018 Amet_0221 370e7bb21c9e42e2a2f63ef11401cfea 378 Pfam PF14520 Helix-hairpin-helix domain 7 53 3.9E-6 T 12-10-2018 Amet_0221 370e7bb21c9e42e2a2f63ef11401cfea 378 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 71 280 2.0E-63 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Amet_0221 370e7bb21c9e42e2a2f63ef11401cfea 378 SUPERFAMILY SSF47781 2 54 4.45E-11 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_0221 370e7bb21c9e42e2a2f63ef11401cfea 378 Pfam PF02481 DNA recombination-mediator protein A 68 271 1.7E-72 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Amet_2642 8839a28d1479cd055b526f93d2ef0782 309 SUPERFAMILY SSF54292 261 307 1.28E-5 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_2642 8839a28d1479cd055b526f93d2ef0782 309 Gene3D G3DSA:2.40.30.10 61 152 3.2E-7 T 12-10-2018 Amet_2642 8839a28d1479cd055b526f93d2ef0782 309 SUPERFAMILY SSF63380 63 156 1.96E-10 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amet_2642 8839a28d1479cd055b526f93d2ef0782 309 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 281 289 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Amet_0823 03f66f51700939886c653b63de9502a9 240 Pfam PF00005 ABC transporter 20 162 3.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0823 03f66f51700939886c653b63de9502a9 240 Gene3D G3DSA:3.40.50.300 1 240 2.8E-64 T 12-10-2018 Amet_0823 03f66f51700939886c653b63de9502a9 240 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0823 03f66f51700939886c653b63de9502a9 240 SUPERFAMILY SSF52540 2 224 2.66E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0823 03f66f51700939886c653b63de9502a9 240 SMART SM00382 28 219 5.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1335 8c70b1af64cd6d6127e2f1b17891c04f 531 PIRSF PIRSF038984 1 530 4.9E-239 T 12-10-2018 IPR028348 FAD dependent protein Amet_1335 8c70b1af64cd6d6127e2f1b17891c04f 531 Gene3D G3DSA:3.30.70.2700 1 79 3.3E-20 T 12-10-2018 Amet_1335 8c70b1af64cd6d6127e2f1b17891c04f 531 Gene3D G3DSA:3.50.50.60 84 301 6.9E-79 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1335 8c70b1af64cd6d6127e2f1b17891c04f 531 Gene3D G3DSA:3.50.50.60 466 529 1.2E-14 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1335 8c70b1af64cd6d6127e2f1b17891c04f 531 SUPERFAMILY SSF51905 99 525 2.05E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1884 5119da5b38639ae2960fd2519d3844a8 356 SUPERFAMILY SSF56266 3 345 7.59E-102 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amet_1884 5119da5b38639ae2960fd2519d3844a8 356 Pfam PF03576 Peptidase family S58 20 339 2.6E-112 T 12-10-2018 IPR005321 Peptidase S58, DmpA Amet_1884 5119da5b38639ae2960fd2519d3844a8 356 Gene3D G3DSA:3.60.70.12 2 355 9.1E-138 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amet_0821 f607507916d7f01639e7572f93e1288c 464 Gene3D G3DSA:3.30.465.10 99 218 6.4E-46 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_0821 f607507916d7f01639e7572f93e1288c 464 Pfam PF01565 FAD binding domain 45 182 1.4E-43 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amet_0821 f607507916d7f01639e7572f93e1288c 464 SUPERFAMILY SSF56176 6 220 2.9E-71 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_0821 f607507916d7f01639e7572f93e1288c 464 Gene3D G3DSA:3.30.43.10 1 97 2.9E-27 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Amet_0821 f607507916d7f01639e7572f93e1288c 464 Gene3D G3DSA:3.30.70.2740 342 423 1.8E-14 T 12-10-2018 Amet_0821 f607507916d7f01639e7572f93e1288c 464 Gene3D G3DSA:1.10.45.10 424 464 1.2E-12 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Amet_0821 f607507916d7f01639e7572f93e1288c 464 SUPERFAMILY SSF55103 193 464 2.45E-56 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Amet_0821 f607507916d7f01639e7572f93e1288c 464 Pfam PF02913 FAD linked oxidases, C-terminal domain 220 463 1.3E-63 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Amet_3731 98a531acde8b4f1d21dc2282d879f195 239 Pfam PF02811 PHP domain 6 183 1.3E-7 T 12-10-2018 IPR004013 PHP domain GO:0003824 Amet_3731 98a531acde8b4f1d21dc2282d879f195 239 SMART SM00481 5 79 1.4E-11 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Amet_3731 98a531acde8b4f1d21dc2282d879f195 239 Gene3D G3DSA:3.20.20.140 4 238 7.8E-67 T 12-10-2018 Amet_3731 98a531acde8b4f1d21dc2282d879f195 239 SUPERFAMILY SSF89550 4 230 3.53E-59 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amet_1434 6cbc62dc24ed727cfe0490406db0ed40 186 SUPERFAMILY SSF160379 1 176 9.81E-46 T 12-10-2018 Amet_1434 6cbc62dc24ed727cfe0490406db0ed40 186 Gene3D G3DSA:3.30.70.1260 89 178 9.5E-10 T 12-10-2018 Amet_1434 6cbc62dc24ed727cfe0490406db0ed40 186 Pfam PF08002 Protein of unknown function (DUF1697) 2 137 1.8E-35 T 12-10-2018 IPR012545 Protein of unknown function DUF1697 Amet_1434 6cbc62dc24ed727cfe0490406db0ed40 186 PIRSF PIRSF008502 1 179 2.2E-48 T 12-10-2018 IPR012545 Protein of unknown function DUF1697 Amet_1434 6cbc62dc24ed727cfe0490406db0ed40 186 Gene3D G3DSA:3.30.70.1280 1 87 8.8E-27 T 12-10-2018 Amet_3811 3b5c5bee173ca8ad8eeede2ebf242968 130 Gene3D G3DSA:1.10.10.1320 24 88 8.5E-6 T 12-10-2018 Amet_3811 3b5c5bee173ca8ad8eeede2ebf242968 130 Pfam PF13490 Putative zinc-finger 28 61 4.6E-9 T 12-10-2018 IPR027383 Putative zinc-finger Amet_4226 394df755f4974e9f62becff71798e576 286 Gene3D G3DSA:3.30.240.20 81 153 9.9E-22 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Amet_4226 394df755f4974e9f62becff71798e576 286 Pfam PF04239 Protein of unknown function (DUF421) 89 204 1.0E-30 T 12-10-2018 IPR007353 Protein of unknown function DUF421 Amet_4226 394df755f4974e9f62becff71798e576 286 Gene3D G3DSA:3.30.240.20 170 229 1.2E-13 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Amet_4226 394df755f4974e9f62becff71798e576 286 Pfam PF07870 Protein of unknown function (DUF1657) 237 284 4.7E-16 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 Amet_0460 78bb33d5d180b882d9017e80ff687229 349 SUPERFAMILY SSF55347 131 321 4.19E-29 T 12-10-2018 Amet_0460 78bb33d5d180b882d9017e80ff687229 349 SUPERFAMILY SSF51735 4 156 1.49E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0460 78bb33d5d180b882d9017e80ff687229 349 Gene3D G3DSA:3.30.360.10 129 342 3.8E-81 T 12-10-2018 Amet_0460 78bb33d5d180b882d9017e80ff687229 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 123 2.3E-26 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amet_0460 78bb33d5d180b882d9017e80ff687229 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 248 7.5E-7 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amet_0460 78bb33d5d180b882d9017e80ff687229 349 Gene3D G3DSA:3.40.50.720 8 320 3.8E-81 T 12-10-2018 Amet_1165 4ad46dbedb59191e5d2bc2581f7529a8 348 Pfam PF13487 HD domain 232 293 1.8E-20 T 12-10-2018 Amet_1165 4ad46dbedb59191e5d2bc2581f7529a8 348 SUPERFAMILY SSF55781 3 153 9.16E-11 T 12-10-2018 Amet_1165 4ad46dbedb59191e5d2bc2581f7529a8 348 Gene3D G3DSA:1.10.3210.10 159 347 1.1E-69 T 12-10-2018 Amet_1165 4ad46dbedb59191e5d2bc2581f7529a8 348 TIGRFAM TIGR00277 HDIG: HDIG domain 182 271 7.6E-10 T 12-10-2018 IPR006675 HDIG domain Amet_1165 4ad46dbedb59191e5d2bc2581f7529a8 348 SMART SM00065 10 158 0.0018 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_1165 4ad46dbedb59191e5d2bc2581f7529a8 348 SUPERFAMILY SSF109604 163 343 4.35E-40 T 12-10-2018 Amet_1165 4ad46dbedb59191e5d2bc2581f7529a8 348 Gene3D G3DSA:3.30.450.40 1 154 1.7E-11 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_1165 4ad46dbedb59191e5d2bc2581f7529a8 348 SMART SM00471 177 312 1.7E-7 T 12-10-2018 IPR003607 HD/PDEase domain Amet_3892 d7baf37e3057d0be65845053356335bb 268 Pfam PF03180 NLPA lipoprotein 33 268 2.4E-86 T 12-10-2018 IPR004872 Lipoprotein NlpA family Amet_3892 d7baf37e3057d0be65845053356335bb 268 Gene3D G3DSA:3.40.190.10 32 265 1.3E-90 T 12-10-2018 Amet_3892 d7baf37e3057d0be65845053356335bb 268 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 266 8.1E-72 T 12-10-2018 IPR004872 Lipoprotein NlpA family Amet_3892 d7baf37e3057d0be65845053356335bb 268 SUPERFAMILY SSF53850 32 268 1.76E-77 T 12-10-2018 Amet_3892 d7baf37e3057d0be65845053356335bb 268 PIRSF PIRSF002854 1 268 2.2E-92 T 12-10-2018 IPR004872 Lipoprotein NlpA family Amet_3892 d7baf37e3057d0be65845053356335bb 268 Gene3D G3DSA:3.40.190.10 114 218 1.3E-90 T 12-10-2018 Amet_0560 7829db8968a671fac70d9c351d064674 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 6.6E-126 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_0560 7829db8968a671fac70d9c351d064674 426 PIRSF PIRSF006066 1 426 1.4E-134 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_0560 7829db8968a671fac70d9c351d064674 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 5.6E-110 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_1649 b191544390d88beae16e598ccd69efdc 442 Pfam PF00581 Rhodanese-like domain 339 428 3.1E-11 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_1649 b191544390d88beae16e598ccd69efdc 442 Gene3D G3DSA:3.40.250.10 313 441 2.7E-20 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_1649 b191544390d88beae16e598ccd69efdc 442 SMART SM00450 335 432 1.4E-8 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_1649 b191544390d88beae16e598ccd69efdc 442 Gene3D G3DSA:3.40.50.1100 6 300 4.1E-71 T 12-10-2018 Amet_1649 b191544390d88beae16e598ccd69efdc 442 SUPERFAMILY SSF53686 2 305 1.17E-54 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_1649 b191544390d88beae16e598ccd69efdc 442 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 295 1.8E-40 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_1649 b191544390d88beae16e598ccd69efdc 442 SUPERFAMILY SSF52821 328 436 3.4E-22 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_1649 b191544390d88beae16e598ccd69efdc 442 Gene3D G3DSA:3.40.50.1100 38 163 4.1E-71 T 12-10-2018 Amet_1587 4606ba57521747d22a0a99670de02a4c 211 SUPERFAMILY SSF52540 13 208 2.42E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1587 4606ba57521747d22a0a99670de02a4c 211 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1587 4606ba57521747d22a0a99670de02a4c 211 Pfam PF00005 ABC transporter 17 155 7.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1587 4606ba57521747d22a0a99670de02a4c 211 Gene3D G3DSA:3.40.50.300 5 211 1.4E-59 T 12-10-2018 Amet_1587 4606ba57521747d22a0a99670de02a4c 211 SMART SM00382 22 206 3.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0699 0e23e3aa4b07a420ba21a9c9993b7e44 563 Gene3D G3DSA:1.10.569.10 240 418 1.4E-61 T 12-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Amet_0699 0e23e3aa4b07a420ba21a9c9993b7e44 563 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 222 545 4.0E-66 T 12-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_0699 0e23e3aa4b07a420ba21a9c9993b7e44 563 SMART SM00790 1 207 4.0E-73 T 12-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_0699 0e23e3aa4b07a420ba21a9c9993b7e44 563 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 2 203 5.1E-56 T 12-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_0699 0e23e3aa4b07a420ba21a9c9993b7e44 563 Gene3D G3DSA:1.10.599.10 238 549 1.4E-61 T 12-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Amet_0699 0e23e3aa4b07a420ba21a9c9993b7e44 563 Gene3D G3DSA:3.60.9.10 1 209 3.7E-59 T 12-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Amet_0699 0e23e3aa4b07a420ba21a9c9993b7e44 563 SUPERFAMILY SSF48310 215 553 1.57E-76 T 12-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_0699 0e23e3aa4b07a420ba21a9c9993b7e44 563 SUPERFAMILY SSF56228 2 207 5.1E-51 T 12-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Amet_1721 6ec8f519283f67238a97105ef5c7874c 251 SUPERFAMILY SSF55729 65 245 7.83E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1721 6ec8f519283f67238a97105ef5c7874c 251 Pfam PF08445 FR47-like protein 168 236 2.5E-9 T 12-10-2018 IPR013653 FR47-like GO:0016747 Amet_1721 6ec8f519283f67238a97105ef5c7874c 251 Gene3D G3DSA:3.40.630.30 117 235 1.0E-28 T 12-10-2018 Amet_1181 e4df77fb580624c3936e9ad2495c6580 86 Pfam PF02583 Metal-sensitive transcriptional repressor 7 81 8.2E-26 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Amet_1181 e4df77fb580624c3936e9ad2495c6580 86 Gene3D G3DSA:1.20.58.1000 2 86 3.8E-26 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Amet_3505 ff3e6b85eebfaa1c35a6c8e99f4f8fa4 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 1.1E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3505 ff3e6b85eebfaa1c35a6c8e99f4f8fa4 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 1.1E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3505 ff3e6b85eebfaa1c35a6c8e99f4f8fa4 195 Pfam PF08359 YsiA-like protein, C-terminal region 130 192 9.6E-5 T 12-10-2018 IPR013570 Transcription regulator YsiA, C-terminal Amet_3505 ff3e6b85eebfaa1c35a6c8e99f4f8fa4 195 Gene3D G3DSA:1.10.357.10 8 195 4.4E-32 T 12-10-2018 Amet_3505 ff3e6b85eebfaa1c35a6c8e99f4f8fa4 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 5.3E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3505 ff3e6b85eebfaa1c35a6c8e99f4f8fa4 195 SUPERFAMILY SSF46689 12 76 7.09E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3505 ff3e6b85eebfaa1c35a6c8e99f4f8fa4 195 SUPERFAMILY SSF48498 86 193 4.18E-15 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_2436 cd518dba14cc52d2771f1d49a3eff579 43 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 9 40 2.3E-5 T 12-10-2018 IPR010022 Protein of unknown function XkdX Amet_4387 4c0245c12c8f640e176e969543d523f6 142 Pfam PF06252 Protein of unknown function (DUF1018) 24 131 5.9E-20 T 12-10-2018 IPR009363 Bacteriophage Mu, Gp16 Amet_1933 4c0245c12c8f640e176e969543d523f6 142 Pfam PF06252 Protein of unknown function (DUF1018) 24 131 5.9E-20 T 12-10-2018 IPR009363 Bacteriophage Mu, Gp16 Amet_0395 4c0245c12c8f640e176e969543d523f6 142 Pfam PF06252 Protein of unknown function (DUF1018) 24 131 5.9E-20 T 12-10-2018 IPR009363 Bacteriophage Mu, Gp16 Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 373 522 9.2E-17 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 Gene3D G3DSA:3.30.70.20 525 604 4.8E-10 T 12-10-2018 Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 PIRSF PIRSF006439 1 600 6.9E-217 T 12-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 SUPERFAMILY SSF52518 344 532 7.44E-22 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 Gene3D G3DSA:3.40.50.970 1 186 7.0E-43 T 12-10-2018 Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 SUPERFAMILY SSF54862 530 597 1.76E-12 T 12-10-2018 Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 Pfam PF00037 4Fe-4S binding domain 573 594 7.5E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 578 589 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 SUPERFAMILY SSF52518 6 220 1.41E-44 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 Gene3D G3DSA:3.40.50.970 359 523 6.3E-13 T 12-10-2018 Amet_3333 eb081305d0e6735c56dbe2ccb2bc7cc4 604 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 20 199 1.0E-6 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 4.8E-35 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 24.74 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 77 2.0E-36 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 SUPERFAMILY SSF50249 6 83 1.03E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 2.9E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 2.9E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 2.9E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 Pfam PF00366 Ribosomal protein S17 11 77 1.7E-31 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4469 8ea6a770823da176eb5b2030ae7ac415 84 Gene3D G3DSA:2.40.50.140 3 84 1.1E-34 T 12-10-2018 Amet_0126 5241d383b19bafcba3315951feb96ee2 69 SUPERFAMILY SSF143422 3 59 1.22E-6 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0126 5241d383b19bafcba3315951feb96ee2 69 Gene3D G3DSA:3.30.70.1290 1 61 1.2E-10 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3607 b9d3e2e2c60fdf5dc4521141e4a60039 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 279 4.0E-89 T 12-10-2018 IPR003797 DegV Amet_3607 b9d3e2e2c60fdf5dc4521141e4a60039 282 Gene3D G3DSA:3.40.50.10170 3 151 4.2E-51 T 12-10-2018 Amet_3607 b9d3e2e2c60fdf5dc4521141e4a60039 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 280 5.4E-84 T 12-10-2018 IPR003797 DegV Amet_3607 b9d3e2e2c60fdf5dc4521141e4a60039 282 SUPERFAMILY SSF82549 4 282 9.42E-79 T 12-10-2018 Amet_3607 b9d3e2e2c60fdf5dc4521141e4a60039 282 Gene3D G3DSA:3.30.1180.10 154 282 5.5E-36 T 12-10-2018 Amet_0175 e52f134bff91f3e6440211bd8f0efd20 75 SMART SM00530 5 70 0.0031 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0175 e52f134bff91f3e6440211bd8f0efd20 75 Pfam PF01381 Helix-turn-helix 20 50 7.5E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0175 e52f134bff91f3e6440211bd8f0efd20 75 Gene3D G3DSA:1.10.260.40 10 73 8.2E-7 T 12-10-2018 Amet_0175 e52f134bff91f3e6440211bd8f0efd20 75 SUPERFAMILY SSF47413 9 69 3.75E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0472 90190f42895cda364bf4f531b9656bfb 769 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 129 6.9E-29 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_0472 90190f42895cda364bf4f531b9656bfb 769 SMART SM01008 18 130 4.8E-39 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_0472 90190f42895cda364bf4f531b9656bfb 769 Gene3D G3DSA:3.30.365.10 379 760 1.0E-115 T 12-10-2018 Amet_0472 90190f42895cda364bf4f531b9656bfb 769 Gene3D G3DSA:3.30.365.10 467 620 1.0E-115 T 12-10-2018 Amet_0472 90190f42895cda364bf4f531b9656bfb 769 SUPERFAMILY SSF54665 2 148 6.15E-39 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Amet_0472 90190f42895cda364bf4f531b9656bfb 769 Gene3D G3DSA:3.90.1170.50 33 130 1.6E-106 T 12-10-2018 Amet_0472 90190f42895cda364bf4f531b9656bfb 769 Gene3D G3DSA:3.30.365.10 17 291 1.6E-106 T 12-10-2018 Amet_0472 90190f42895cda364bf4f531b9656bfb 769 SUPERFAMILY SSF56003 134 764 6.41E-181 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amet_0472 90190f42895cda364bf4f531b9656bfb 769 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 704 1.6E-162 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amet_0472 90190f42895cda364bf4f531b9656bfb 769 Gene3D G3DSA:3.30.365.10 131 368 1.6E-106 T 12-10-2018 Amet_4639 1cc65cec388c4ed88f9124d989486269 277 SUPERFAMILY SSF55469 183 277 4.19E-6 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_4639 1cc65cec388c4ed88f9124d989486269 277 Gene3D G3DSA:3.40.109.10 1 131 8.8E-25 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_4639 1cc65cec388c4ed88f9124d989486269 277 SUPERFAMILY SSF55469 2 178 5.23E-20 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_4639 1cc65cec388c4ed88f9124d989486269 277 Pfam PF14512 Putative TM nitroreductase 3 237 6.5E-29 T 12-10-2018 IPR029478 Putative nitroreductase TM1586 Amet_0208 1569bb55eddfc3ec0fe948aa67978d7c 85 Gene3D G3DSA:3.40.50.720 1 78 3.3E-13 T 12-10-2018 Amet_0208 1569bb55eddfc3ec0fe948aa67978d7c 85 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 57 1.9E-8 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amet_0208 1569bb55eddfc3ec0fe948aa67978d7c 85 SUPERFAMILY SSF51735 1 74 4.91E-12 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 Pfam PF00271 Helicase conserved C-terminal domain 658 765 3.6E-8 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 SMART SM00487 373 584 2.9E-16 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 Pfam PF04851 Type III restriction enzyme, res subunit 375 557 1.8E-32 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 Gene3D G3DSA:3.40.50.300 571 797 2.5E-56 T 12-10-2018 Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 SUPERFAMILY SSF52540 391 775 1.29E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 Pfam PF08463 EcoEI R protein C-terminal 918 1079 3.2E-34 T 12-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 SMART SM00490 675 767 1.7E-5 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 190 312 1.2E-8 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 Gene3D G3DSA:3.40.50.300 358 570 1.0E-52 T 12-10-2018 Amet_0847 c473b10787e06f2b437ceb42abd3a1e9 1086 Gene3D G3DSA:3.90.1570.30 172 330 3.5E-7 T 12-10-2018 Amet_2068 168c3fa35fabbd8079d1f7ef23e94053 273 PIRSF PIRSF015853 1 273 1.7E-88 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Amet_2068 168c3fa35fabbd8079d1f7ef23e94053 273 Pfam PF04951 D-aminopeptidase 1 263 7.3E-96 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Amet_2068 168c3fa35fabbd8079d1f7ef23e94053 273 SUPERFAMILY SSF63992 1 270 1.31E-83 T 12-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily Amet_2068 168c3fa35fabbd8079d1f7ef23e94053 273 Gene3D G3DSA:3.40.50.10780 1 215 6.1E-92 T 12-10-2018 IPR027476 D-aminopeptidase, N-terminal Amet_2068 168c3fa35fabbd8079d1f7ef23e94053 273 Gene3D G3DSA:3.30.1360.130 119 261 6.1E-92 T 12-10-2018 Amet_2333 fff4c2b57146c55e4c22e76c20b3b4fa 155 SUPERFAMILY SSF46785 3 136 1.28E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2333 fff4c2b57146c55e4c22e76c20b3b4fa 155 Pfam PF01475 Ferric uptake regulator family 11 132 1.7E-29 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Amet_2333 fff4c2b57146c55e4c22e76c20b3b4fa 155 Gene3D G3DSA:1.10.10.10 1 84 1.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2333 fff4c2b57146c55e4c22e76c20b3b4fa 155 Gene3D G3DSA:3.30.1490.190 85 139 7.5E-16 T 12-10-2018 Amet_1883 c148f46bc8ede40daee10dfc861f9d94 471 Gene3D G3DSA:3.20.20.140 365 391 1.6E-10 T 12-10-2018 Amet_1883 c148f46bc8ede40daee10dfc861f9d94 471 Gene3D G3DSA:2.30.40.10 392 414 1.6E-10 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_1883 c148f46bc8ede40daee10dfc861f9d94 471 SUPERFAMILY SSF51556 56 395 1.67E-16 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_1883 c148f46bc8ede40daee10dfc861f9d94 471 Gene3D G3DSA:3.20.20.140 1 236 3.2E-16 T 12-10-2018 Amet_1883 c148f46bc8ede40daee10dfc861f9d94 471 SUPERFAMILY SSF51338 3 434 5.36E-16 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_1883 c148f46bc8ede40daee10dfc861f9d94 471 Pfam PF01979 Amidohydrolase family 55 185 1.2E-5 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_1883 c148f46bc8ede40daee10dfc861f9d94 471 Pfam PF01979 Amidohydrolase family 339 412 5.1E-9 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 Pfam PF00990 Diguanylate cyclase, GGDEF domain 580 739 4.8E-52 T 12-10-2018 IPR000160 GGDEF domain Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SMART SM00267 568 744 6.0E-65 T 12-10-2018 IPR000160 GGDEF domain Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 Gene3D G3DSA:1.25.40.10 20 177 1.6E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SUPERFAMILY SSF48452 141 352 2.15E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SUPERFAMILY SSF48452 59 173 9.11E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 577 742 2.5E-52 T 12-10-2018 IPR000160 GGDEF domain Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SUPERFAMILY SSF55781 391 563 6.32E-27 T 12-10-2018 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SMART SM00065 405 555 1.5E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 Gene3D G3DSA:3.30.70.270 569 742 1.8E-57 T 12-10-2018 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 Pfam PF13181 Tetratricopeptide repeat 102 132 0.13 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SMART SM00028 101 134 0.021 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SMART SM00028 221 254 2.2 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SMART SM00028 181 214 0.067 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SMART SM00028 141 174 8.0E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SMART SM00028 261 294 27.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SMART SM00028 61 94 3.4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 Pfam PF13185 GAF domain 404 545 9.2E-16 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 Gene3D G3DSA:3.30.450.40 372 568 3.6E-27 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 Pfam PF13424 Tetratricopeptide repeat 223 293 1.5E-9 T 12-10-2018 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 Pfam PF13424 Tetratricopeptide repeat 141 208 5.4E-13 T 12-10-2018 Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 SUPERFAMILY SSF55073 584 741 1.02E-47 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_3698 81d778ce3044f35e9f6e48044d79a814 746 Gene3D G3DSA:1.25.40.10 178 365 1.1E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1757 0aff764c021042dc0ab3648bbac80255 248 PIRSF PIRSF003073 1 248 2.2E-59 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_1757 0aff764c021042dc0ab3648bbac80255 248 Pfam PF01695 IstB-like ATP binding protein 54 229 8.6E-54 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_1757 0aff764c021042dc0ab3648bbac80255 248 Gene3D G3DSA:3.40.50.300 66 246 3.6E-39 T 12-10-2018 Amet_1757 0aff764c021042dc0ab3648bbac80255 248 Pfam PF08483 IstB-like ATP binding N-terminal 25 51 9.9E-11 T 12-10-2018 IPR013690 IstB-like ATP binding N-terminal Amet_1757 0aff764c021042dc0ab3648bbac80255 248 SUPERFAMILY SSF52540 69 234 1.15E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2165 09c1dbf82ec8813a718dd5d2e759e56b 408 Pfam PF00079 Serpin (serine protease inhibitor) 45 404 2.1E-112 T 12-10-2018 IPR023796 Serpin domain Amet_2165 09c1dbf82ec8813a718dd5d2e759e56b 408 ProSitePatterns PS00284 Serpins signature. 380 390 - T 12-10-2018 IPR023795 Serpin, conserved site Amet_2165 09c1dbf82ec8813a718dd5d2e759e56b 408 SMART SM00093 51 407 1.7E-88 T 12-10-2018 IPR023796 Serpin domain Amet_2165 09c1dbf82ec8813a718dd5d2e759e56b 408 Gene3D G3DSA:2.30.39.10 209 403 4.9E-113 T 12-10-2018 Amet_2165 09c1dbf82ec8813a718dd5d2e759e56b 408 SUPERFAMILY SSF56574 9 404 6.81E-110 T 12-10-2018 IPR036186 Serpin superfamily Amet_2165 09c1dbf82ec8813a718dd5d2e759e56b 408 Gene3D G3DSA:3.30.497.10 51 371 4.9E-113 T 12-10-2018 Amet_0827 a244d19e2d9912938f3477729145cf80 151 SUPERFAMILY SSF55804 5 150 2.35E-42 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Amet_0827 a244d19e2d9912938f3477729145cf80 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 150 5.4E-40 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Amet_0827 a244d19e2d9912938f3477729145cf80 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 55 71 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain Amet_0827 a244d19e2d9912938f3477729145cf80 151 Gene3D G3DSA:3.40.930.10 4 151 1.3E-50 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Amet_0827 a244d19e2d9912938f3477729145cf80 151 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 9 136 6.0E-40 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 Amet_0991 e043bfcbeca3cfef63b2d180dd0994d1 226 Pfam PF12800 4Fe-4S binding domain 12 24 0.45 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_0991 e043bfcbeca3cfef63b2d180dd0994d1 226 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0991 e043bfcbeca3cfef63b2d180dd0994d1 226 Pfam PF13247 4Fe-4S dicluster domain 152 186 6.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_0991 e043bfcbeca3cfef63b2d180dd0994d1 226 Pfam PF13247 4Fe-4S dicluster domain 52 113 1.5E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_0991 e043bfcbeca3cfef63b2d180dd0994d1 226 SUPERFAMILY SSF54862 3 219 1.47E-66 T 12-10-2018 Amet_2382 7564ce0b0aa2540416ac56f484211162 362 Gene3D G3DSA:3.40.50.300 90 246 7.6E-47 T 12-10-2018 Amet_2382 7564ce0b0aa2540416ac56f484211162 362 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 120 245 4.6E-32 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_2382 7564ce0b0aa2540416ac56f484211162 362 Gene3D G3DSA:1.10.8.60 247 313 7.6E-47 T 12-10-2018 Amet_2382 7564ce0b0aa2540416ac56f484211162 362 SUPERFAMILY SSF52540 77 314 5.13E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2382 7564ce0b0aa2540416ac56f484211162 362 SMART SM00382 116 248 6.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0756 42075e958c2e771195eb402cf91078dc 129 SMART SM00748 11 119 4.9E-20 T 12-10-2018 IPR007842 HEPN domain Amet_0756 42075e958c2e771195eb402cf91078dc 129 Gene3D G3DSA:1.20.120.330 3 128 2.8E-30 T 12-10-2018 Amet_0756 42075e958c2e771195eb402cf91078dc 129 SUPERFAMILY SSF81593 9 125 3.92E-27 T 12-10-2018 Amet_0756 42075e958c2e771195eb402cf91078dc 129 Pfam PF05168 HEPN domain 9 125 2.9E-30 T 12-10-2018 IPR007842 HEPN domain Amet_0510 330539757369cc1daf15f5d651f40869 449 Gene3D G3DSA:3.90.1150.10 10 426 9.4E-155 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0510 330539757369cc1daf15f5d651f40869 449 Pfam PF00202 Aminotransferase class-III 28 430 1.6E-115 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_0510 330539757369cc1daf15f5d651f40869 449 Gene3D G3DSA:3.40.640.10 63 330 9.4E-155 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0510 330539757369cc1daf15f5d651f40869 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 247 284 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_0510 330539757369cc1daf15f5d651f40869 449 PIRSF PIRSF000521 127 433 2.7E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_0510 330539757369cc1daf15f5d651f40869 449 PIRSF PIRSF000521 20 134 2.0E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_0510 330539757369cc1daf15f5d651f40869 449 SUPERFAMILY SSF53383 25 430 9.04E-130 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3737 94478dea2ce667fe82e117c2e0434159 400 Gene3D G3DSA:3.40.630.10 27 384 1.5E-126 T 12-10-2018 Amet_3737 94478dea2ce667fe82e117c2e0434159 400 Pfam PF01546 Peptidase family M20/M25/M40 84 395 2.2E-31 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_3737 94478dea2ce667fe82e117c2e0434159 400 PIRSF PIRSF005962 13 400 9.2E-123 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_3737 94478dea2ce667fe82e117c2e0434159 400 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 27 387 1.7E-101 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_3737 94478dea2ce667fe82e117c2e0434159 400 Gene3D G3DSA:3.30.70.360 193 307 1.5E-126 T 12-10-2018 Amet_3737 94478dea2ce667fe82e117c2e0434159 400 SUPERFAMILY SSF53187 14 399 2.21E-84 T 12-10-2018 Amet_3737 94478dea2ce667fe82e117c2e0434159 400 Pfam PF07687 Peptidase dimerisation domain 198 289 5.4E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Amet_3737 94478dea2ce667fe82e117c2e0434159 400 SUPERFAMILY SSF55031 193 305 1.64E-21 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_1526 bd355ed5443a808b5dcc0514dd73ff9b 203 SUPERFAMILY SSF103473 2 154 1.7E-23 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_1526 bd355ed5443a808b5dcc0514dd73ff9b 203 Gene3D G3DSA:1.20.1250.20 1 200 1.6E-20 T 12-10-2018 Amet_1526 bd355ed5443a808b5dcc0514dd73ff9b 203 Pfam PF07690 Major Facilitator Superfamily 1 191 5.6E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 Gene3D G3DSA:1.10.1670.10 9 210 6.9E-89 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 ProSitePatterns PS01155 Endonuclease III family signature. 101 130 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 SMART SM00478 38 189 5.3E-51 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 162 5.1E-21 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 Gene3D G3DSA:1.10.340.30 20 131 6.9E-89 T 12-10-2018 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 SUPERFAMILY SSF48150 6 220 1.04E-70 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 SUPERFAMILY SSF55811 219 348 2.44E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 191 207 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 Pfam PF14815 NUDIX domain 235 346 5.7E-19 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.7E-7 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 Gene3D G3DSA:3.90.79.10 233 351 6.5E-22 T 12-10-2018 Amet_4327 4bacdba2da9498302a21fcb247e5dca1 352 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 6 268 1.1E-101 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Amet_0723 c3c6225a3a7cc8de916e85b48615e977 242 Pfam PF00156 Phosphoribosyl transferase domain 147 238 1.0E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amet_0723 c3c6225a3a7cc8de916e85b48615e977 242 Gene3D G3DSA:3.40.50.2020 104 242 5.3E-19 T 12-10-2018 Amet_0723 c3c6225a3a7cc8de916e85b48615e977 242 SUPERFAMILY SSF53271 65 236 1.06E-32 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 355 39.9 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 SMART SM00864 13 205 3.9E-121 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 SUPERFAMILY SSF55307 204 319 2.75E-47 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 SMART SM00865 207 324 1.5E-59 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 Pfam PF12327 FtsZ family, C-terminal domain 222 316 1.3E-38 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 Gene3D G3DSA:3.30.1330.20 221 333 7.8E-45 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 PRINTS PR00423 Cell division protein FtsZ signature 212 233 4.4E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 PRINTS PR00423 Cell division protein FtsZ signature 126 147 4.4E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 PRINTS PR00423 Cell division protein FtsZ signature 189 211 4.4E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 PRINTS PR00423 Cell division protein FtsZ signature 98 118 4.4E-51 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 329 4.1E-138 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 1.1E-44 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 SUPERFAMILY SSF52490 12 208 3.66E-73 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Amet_2873 dfa3a2cb07d548d8ef015b90e5cff746 364 Gene3D G3DSA:3.40.50.1440 4 219 6.9E-85 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Amet_2509 a20b47d9ebfe4d43c7e0da1aea82b000 267 SUPERFAMILY SSF53335 60 242 4.57E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2509 a20b47d9ebfe4d43c7e0da1aea82b000 267 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 6 237 2.7E-92 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Amet_2509 a20b47d9ebfe4d43c7e0da1aea82b000 267 Pfam PF01479 S4 domain 5 49 5.9E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2509 a20b47d9ebfe4d43c7e0da1aea82b000 267 Pfam PF01728 FtsJ-like methyltransferase 61 242 2.0E-20 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Amet_2509 a20b47d9ebfe4d43c7e0da1aea82b000 267 Gene3D G3DSA:3.40.50.150 64 267 1.1E-87 T 12-10-2018 Amet_2509 a20b47d9ebfe4d43c7e0da1aea82b000 267 PIRSF PIRSF005578 1 264 3.1E-106 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Amet_2509 a20b47d9ebfe4d43c7e0da1aea82b000 267 SMART SM00363 5 70 1.7E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2509 a20b47d9ebfe4d43c7e0da1aea82b000 267 SUPERFAMILY SSF55174 4 69 1.62E-10 T 12-10-2018 Amet_2509 a20b47d9ebfe4d43c7e0da1aea82b000 267 Gene3D G3DSA:3.10.290.10 2 63 4.2E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_1252 0c69cb48b8f8436526416012a02bf225 327 SMART SM00861 4 179 2.0E-73 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amet_1252 0c69cb48b8f8436526416012a02bf225 327 Pfam PF02779 Transketolase, pyrimidine binding domain 5 178 3.5E-52 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Amet_1252 0c69cb48b8f8436526416012a02bf225 327 Gene3D G3DSA:3.40.50.970 1 192 2.1E-86 T 12-10-2018 Amet_1252 0c69cb48b8f8436526416012a02bf225 327 Gene3D G3DSA:3.40.50.920 193 324 3.3E-51 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_1252 0c69cb48b8f8436526416012a02bf225 327 Pfam PF02780 Transketolase, C-terminal domain 194 315 3.4E-41 T 12-10-2018 IPR033248 Transketolase, C-terminal domain Amet_1252 0c69cb48b8f8436526416012a02bf225 327 SUPERFAMILY SSF52922 188 322 5.76E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_1252 0c69cb48b8f8436526416012a02bf225 327 SUPERFAMILY SSF52518 2 204 7.85E-72 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_2741 e08f5e00c489e7b35759b5f0fbdc5daf 285 PIRSF PIRSF006230 1 285 3.2E-99 T 12-10-2018 IPR016478 GTPase, MTG1 Amet_2741 e08f5e00c489e7b35759b5f0fbdc5daf 285 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 171 186 2.2E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2741 e08f5e00c489e7b35759b5f0fbdc5daf 285 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 125 145 2.2E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2741 e08f5e00c489e7b35759b5f0fbdc5daf 285 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 5 280 2.1E-107 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis Amet_2741 e08f5e00c489e7b35759b5f0fbdc5daf 285 Pfam PF01926 50S ribosome-binding GTPase 124 207 1.8E-16 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2741 e08f5e00c489e7b35759b5f0fbdc5daf 285 Gene3D G3DSA:1.10.1580.10 182 273 2.6E-26 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Amet_2741 e08f5e00c489e7b35759b5f0fbdc5daf 285 Gene3D G3DSA:3.40.50.300 14 181 1.7E-49 T 12-10-2018 Amet_2741 e08f5e00c489e7b35759b5f0fbdc5daf 285 SUPERFAMILY SSF52540 11 259 1.24E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3522 ee2286f54ab14774bb2646eadaaa88f8 127 Gene3D G3DSA:3.30.70.120 1 127 1.8E-41 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amet_3522 ee2286f54ab14774bb2646eadaaa88f8 127 PRINTS PR00340 P-II protein signature 66 89 1.4E-22 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3522 ee2286f54ab14774bb2646eadaaa88f8 127 PRINTS PR00340 P-II protein signature 2 17 1.4E-22 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3522 ee2286f54ab14774bb2646eadaaa88f8 127 PRINTS PR00340 P-II protein signature 97 117 1.4E-22 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3522 ee2286f54ab14774bb2646eadaaa88f8 127 PRINTS PR00340 P-II protein signature 23 41 1.4E-22 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3522 ee2286f54ab14774bb2646eadaaa88f8 127 Pfam PF00543 Nitrogen regulatory protein P-II 4 119 5.0E-28 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3522 ee2286f54ab14774bb2646eadaaa88f8 127 SMART SM00938 4 119 4.8E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3522 ee2286f54ab14774bb2646eadaaa88f8 127 SUPERFAMILY SSF54913 1 126 4.13E-30 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amet_3522 ee2286f54ab14774bb2646eadaaa88f8 127 ProSitePatterns PS00638 P-II protein C-terminal region signature. 97 110 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Amet_0732 12d7f974e43060a7099d9604cbb431cc 399 Pfam PF00700 Bacterial flagellin C-terminal helical region 314 398 7.6E-29 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amet_0732 12d7f974e43060a7099d9604cbb431cc 399 PRINTS PR00207 Flagellin signature 74 93 1.0E-23 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Amet_0732 12d7f974e43060a7099d9604cbb431cc 399 PRINTS PR00207 Flagellin signature 109 132 1.0E-23 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Amet_0732 12d7f974e43060a7099d9604cbb431cc 399 PRINTS PR00207 Flagellin signature 35 52 1.0E-23 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Amet_0732 12d7f974e43060a7099d9604cbb431cc 399 SUPERFAMILY SSF64518 1 398 2.48E-102 T 12-10-2018 Amet_0732 12d7f974e43060a7099d9604cbb431cc 399 Gene3D G3DSA:1.20.1330.10 42 349 5.9E-83 T 12-10-2018 Amet_0732 12d7f974e43060a7099d9604cbb431cc 399 Gene3D G3DSA:3.30.70.2120 171 297 5.9E-83 T 12-10-2018 Amet_0732 12d7f974e43060a7099d9604cbb431cc 399 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 3.6E-45 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Amet_0732 12d7f974e43060a7099d9604cbb431cc 399 Gene3D G3DSA:1.10.8.410 350 398 6.6E-27 T 12-10-2018 Amet_1696 188580e03d221b821adf9985f28a7a5b 112 Pfam PF08960 Domain of unknown function (DUF1874) 9 104 1.9E-37 T 12-10-2018 IPR015055 Protein of unknown function DUF1874 Amet_1696 188580e03d221b821adf9985f28a7a5b 112 SUPERFAMILY SSF143602 7 111 7.85E-37 T 12-10-2018 IPR037236 STIV B116-like Amet_1696 188580e03d221b821adf9985f28a7a5b 112 Gene3D G3DSA:3.40.50.11170 9 110 7.3E-33 T 12-10-2018 IPR037236 STIV B116-like Amet_3189 a7c16d854e50cfdb0f5d04a29cdc1356 196 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 4 193 23.532 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Amet_3189 a7c16d854e50cfdb0f5d04a29cdc1356 196 PIRSF PIRSF006102 2 196 3.9E-60 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Amet_3189 a7c16d854e50cfdb0f5d04a29cdc1356 196 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 192 1.3E-57 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Amet_4592 9be932039c038742ac5fabab146a8d8e 223 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 39 164 1.6E-49 T 12-10-2018 IPR014202 Sporulation stage II, protein R Amet_4592 9be932039c038742ac5fabab146a8d8e 223 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 8 169 1.3E-55 T 12-10-2018 IPR014202 Sporulation stage II, protein R Amet_2702 94bd8b846782c6b07b3ce2a8eca371b5 391 Pfam PF00448 SRP54-type protein, GTPase domain 197 387 7.9E-43 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2702 94bd8b846782c6b07b3ce2a8eca371b5 391 SUPERFAMILY SSF52540 194 387 3.53E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2702 94bd8b846782c6b07b3ce2a8eca371b5 391 SMART SM00962 197 388 1.8E-68 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Amet_2702 94bd8b846782c6b07b3ce2a8eca371b5 391 SMART SM00382 196 342 2.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2702 94bd8b846782c6b07b3ce2a8eca371b5 391 Gene3D G3DSA:1.20.120.1380 145 378 6.6E-71 T 12-10-2018 Amet_2702 94bd8b846782c6b07b3ce2a8eca371b5 391 Gene3D G3DSA:3.40.50.300 193 376 6.6E-71 T 12-10-2018 Amet_2702 94bd8b846782c6b07b3ce2a8eca371b5 391 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 284 7.0E-69 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 Amet_4575 663c2878736967f046d1c046680c79d3 90 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 2.3E-31 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Amet_4575 663c2878736967f046d1c046680c79d3 90 SUPERFAMILY SSF159133 1 89 9.68E-31 T 12-10-2018 IPR036677 EutN/Ccml superfamily Amet_4575 663c2878736967f046d1c046680c79d3 90 Gene3D G3DSA:2.40.50.220 1 90 1.6E-32 T 12-10-2018 IPR036677 EutN/Ccml superfamily Amet_4575 663c2878736967f046d1c046680c79d3 90 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 83 2.0E-13 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Amet_0722 bc55623b663f63627e74e9e405584f47 754 Pfam PF13604 AAA domain 326 509 8.9E-45 T 12-10-2018 Amet_0722 bc55623b663f63627e74e9e405584f47 754 Gene3D G3DSA:1.10.150.20 79 147 3.2E-10 T 12-10-2018 Amet_0722 bc55623b663f63627e74e9e405584f47 754 SMART SM00278 124 143 1.8 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_0722 bc55623b663f63627e74e9e405584f47 754 SMART SM00278 89 110 810.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_0722 bc55623b663f63627e74e9e405584f47 754 SMART SM00278 188 207 230.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_0722 bc55623b663f63627e74e9e405584f47 754 SMART SM00382 340 483 0.0015 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0722 bc55623b663f63627e74e9e405584f47 754 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 13 739 1.5E-208 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Amet_0722 bc55623b663f63627e74e9e405584f47 754 Gene3D G3DSA:1.10.10.2220 189 284 2.1E-16 T 12-10-2018 Amet_0722 bc55623b663f63627e74e9e405584f47 754 Pfam PF13538 UvrD-like helicase C-terminal domain 667 714 3.0E-18 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain Amet_0722 bc55623b663f63627e74e9e405584f47 754 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 9 743 28.343 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Amet_0722 bc55623b663f63627e74e9e405584f47 754 Pfam PF14520 Helix-hairpin-helix domain 96 146 3.6E-6 T 12-10-2018 Amet_0722 bc55623b663f63627e74e9e405584f47 754 SUPERFAMILY SSF47781 92 164 1.39E-10 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_0722 bc55623b663f63627e74e9e405584f47 754 SUPERFAMILY SSF52540 325 719 3.9E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0722 bc55623b663f63627e74e9e405584f47 754 Pfam PF14490 Helix-hairpin-helix containing domain 147 236 6.0E-33 T 12-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain Amet_0722 bc55623b663f63627e74e9e405584f47 754 Gene3D G3DSA:2.30.30.940 578 667 7.7E-151 T 12-10-2018 Amet_0722 bc55623b663f63627e74e9e405584f47 754 Gene3D G3DSA:3.40.50.300 489 730 7.7E-151 T 12-10-2018 Amet_0722 bc55623b663f63627e74e9e405584f47 754 Gene3D G3DSA:3.40.50.300 310 735 7.7E-151 T 12-10-2018 Amet_3160 938b911c0bb5276aaa18412c23a764e2 691 Gene3D G3DSA:3.40.50.300 444 688 4.8E-90 T 12-10-2018 Amet_3160 938b911c0bb5276aaa18412c23a764e2 691 SMART SM00382 473 674 2.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3160 938b911c0bb5276aaa18412c23a764e2 691 Gene3D G3DSA:1.20.1560.10 156 434 3.3E-85 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_3160 938b911c0bb5276aaa18412c23a764e2 691 Gene3D G3DSA:1.20.1560.10 12 73 5.9E-7 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_3160 938b911c0bb5276aaa18412c23a764e2 691 SUPERFAMILY SSF52540 439 684 4.55E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3160 938b911c0bb5276aaa18412c23a764e2 691 SUPERFAMILY SSF90123 21 431 1.7E-86 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_3160 938b911c0bb5276aaa18412c23a764e2 691 Pfam PF00005 ABC transporter 464 613 1.8E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3160 938b911c0bb5276aaa18412c23a764e2 691 ProSitePatterns PS00211 ABC transporters family signature. 585 599 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3160 938b911c0bb5276aaa18412c23a764e2 691 Pfam PF00664 ABC transporter transmembrane region 160 401 5.0E-54 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amet_4451 199408ed2629b09ed7cfd5e550683d5e 132 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 132 33.373 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Amet_4451 199408ed2629b09ed7cfd5e550683d5e 132 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 13 129 6.5E-58 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4451 199408ed2629b09ed7cfd5e550683d5e 132 PIRSF PIRSF002131 1 132 2.0E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Amet_4451 199408ed2629b09ed7cfd5e550683d5e 132 Pfam PF00411 Ribosomal protein S11 22 131 1.7E-49 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Amet_4451 199408ed2629b09ed7cfd5e550683d5e 132 SUPERFAMILY SSF53137 17 132 1.63E-48 T 12-10-2018 Amet_4451 199408ed2629b09ed7cfd5e550683d5e 132 Gene3D G3DSA:3.30.420.80 4 132 7.4E-54 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Amet_4451 199408ed2629b09ed7cfd5e550683d5e 132 ProSitePatterns PS00054 Ribosomal protein S11 signature. 100 122 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site Amet_1018 8311699fd34c4a0364677ca29754fde3 366 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 6 357 9.5E-121 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Amet_1018 8311699fd34c4a0364677ca29754fde3 366 SUPERFAMILY SSF53597 143 362 2.13E-64 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amet_1018 8311699fd34c4a0364677ca29754fde3 366 PIRSF PIRSF006769 1 364 4.2E-144 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Amet_1018 8311699fd34c4a0364677ca29754fde3 366 SUPERFAMILY SSF53927 2 142 1.01E-47 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amet_1018 8311699fd34c4a0364677ca29754fde3 366 Pfam PF01872 RibD C-terminal domain 146 357 3.4E-55 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Amet_1018 8311699fd34c4a0364677ca29754fde3 366 Gene3D G3DSA:3.40.430.10 140 362 4.4E-76 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Amet_1018 8311699fd34c4a0364677ca29754fde3 366 Gene3D G3DSA:3.40.140.10 1 139 6.6E-49 T 12-10-2018 Amet_1018 8311699fd34c4a0364677ca29754fde3 366 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 145 360 1.3E-71 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Amet_1018 8311699fd34c4a0364677ca29754fde3 366 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 2.4E-21 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Amet_2229 e4571a36ac89c9183b58edb8b31ca588 216 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 202 8.8E-63 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal Amet_2229 e4571a36ac89c9183b58edb8b31ca588 216 SUPERFAMILY SSF54980 135 200 8.63E-13 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_2229 e4571a36ac89c9183b58edb8b31ca588 216 Gene3D G3DSA:3.30.230.30 1 132 5.1E-49 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily Amet_2229 e4571a36ac89c9183b58edb8b31ca588 216 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 12-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Amet_2229 e4571a36ac89c9183b58edb8b31ca588 216 SUPERFAMILY SSF54211 2 129 1.74E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_2229 e4571a36ac89c9183b58edb8b31ca588 216 Pfam PF01205 Uncharacterized protein family UPF0029 20 124 7.7E-33 T 12-10-2018 IPR001498 Impact, N-terminal Amet_2229 e4571a36ac89c9183b58edb8b31ca588 216 Pfam PF09186 Domain of unknown function (DUF1949) 140 194 4.6E-18 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal Amet_3023 3755285701aac80f7f90743c4936b8b5 177 Gene3D G3DSA:1.10.8.10 2 40 1.9E-8 T 12-10-2018 Amet_3023 3755285701aac80f7f90743c4936b8b5 177 Pfam PF14242 Domain of unknown function (DUF4342) 52 125 1.6E-27 T 12-10-2018 IPR025642 Domain of unknown function DUF4342 Amet_3023 3755285701aac80f7f90743c4936b8b5 177 SUPERFAMILY SSF46934 1 53 4.51E-12 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 Amet_1718 f646a13bfb0f08297fd46977aacfde3e 481 Pfam PF01554 MatE 55 216 6.7E-30 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1718 f646a13bfb0f08297fd46977aacfde3e 481 Pfam PF01554 MatE 281 439 2.1E-28 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1718 f646a13bfb0f08297fd46977aacfde3e 481 TIGRFAM TIGR00797 matE: MATE efflux family protein 55 453 4.8E-80 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1718 f646a13bfb0f08297fd46977aacfde3e 481 PIRSF PIRSF006603 35 481 2.2E-103 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4565 2bb363b865fc379dc3f1bee2c7872c4e 192 SUPERFAMILY SSF53448 2 185 4.77E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_4565 2bb363b865fc379dc3f1bee2c7872c4e 192 Gene3D G3DSA:3.90.550.10 1 191 3.7E-46 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_4565 2bb363b865fc379dc3f1bee2c7872c4e 192 Pfam PF12804 MobA-like NTP transferase domain 3 160 6.2E-35 T 12-10-2018 IPR025877 MobA-like NTP transferase Amet_3301 5137c7c1d9b0a91b4fbcf031608d3eaa 335 PIRSF PIRSF015268 1 335 3.6E-141 T 12-10-2018 IPR011204 Virulence protein RhuM-like Amet_3301 5137c7c1d9b0a91b4fbcf031608d3eaa 335 Pfam PF13310 Virulence protein RhuM family 64 308 5.1E-110 T 12-10-2018 IPR011204 Virulence protein RhuM-like Amet_2526 fa7f834fba94ce2e7b915c6c60c33a97 276 Gene3D G3DSA:3.40.50.1580 1 272 6.2E-110 T 12-10-2018 Amet_2526 fa7f834fba94ce2e7b915c6c60c33a97 276 Pfam PF01048 Phosphorylase superfamily 25 267 5.1E-50 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Amet_2526 fa7f834fba94ce2e7b915c6c60c33a97 276 SUPERFAMILY SSF53167 4 272 1.57E-94 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Amet_2526 fa7f834fba94ce2e7b915c6c60c33a97 276 PIRSF PIRSF000477 1 273 9.2E-110 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Amet_2526 fa7f834fba94ce2e7b915c6c60c33a97 276 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 25 270 7.0E-106 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Amet_2526 fa7f834fba94ce2e7b915c6c60c33a97 276 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 25 270 5.2E-107 T 12-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Amet_2526 fa7f834fba94ce2e7b915c6c60c33a97 276 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 12-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 Amet_2801 9ce9b704491113fabf1b1873709c08ee 262 Pfam PF01479 S4 domain 187 232 1.5E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2801 9ce9b704491113fabf1b1873709c08ee 262 Gene3D G3DSA:3.10.290.10 184 242 7.7E-9 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_2801 9ce9b704491113fabf1b1873709c08ee 262 SUPERFAMILY SSF55174 63 255 1.44E-30 T 12-10-2018 Amet_2801 9ce9b704491113fabf1b1873709c08ee 262 Gene3D G3DSA:3.30.70.330 85 170 6.7E-23 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Amet_2801 9ce9b704491113fabf1b1873709c08ee 262 SMART SM00363 186 246 4.4E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2325 110a844e6acf13cdf8bc94e41d15027d 229 Gene3D G3DSA:1.10.10.10 130 229 1.2E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2325 110a844e6acf13cdf8bc94e41d15027d 229 SUPERFAMILY SSF52172 3 125 1.22E-42 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2325 110a844e6acf13cdf8bc94e41d15027d 229 SMART SM00448 3 113 6.1E-48 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2325 110a844e6acf13cdf8bc94e41d15027d 229 SUPERFAMILY SSF46894 125 227 7.58E-33 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_2325 110a844e6acf13cdf8bc94e41d15027d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 4.2E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_2325 110a844e6acf13cdf8bc94e41d15027d 229 SMART SM00862 150 226 2.1E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_2325 110a844e6acf13cdf8bc94e41d15027d 229 Pfam PF00072 Response regulator receiver domain 6 114 3.7E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2325 110a844e6acf13cdf8bc94e41d15027d 229 Gene3D G3DSA:3.40.50.2300 2 129 5.3E-40 T 12-10-2018 Amet_2037 743ac2f7d1e633db503fcaca4b5fea99 287 Gene3D G3DSA:1.10.3720.10 73 277 1.6E-19 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2037 743ac2f7d1e633db503fcaca4b5fea99 287 SUPERFAMILY SSF161098 80 270 4.19E-23 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2037 743ac2f7d1e633db503fcaca4b5fea99 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 276 5.1E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1982 d8e84acf077977dd1cdbefe571495c84 222 SMART SM00646 108 216 9.7E-36 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_1982 d8e84acf077977dd1cdbefe571495c84 222 Gene3D G3DSA:3.40.630.40 44 222 2.8E-60 T 12-10-2018 Amet_1982 d8e84acf077977dd1cdbefe571495c84 222 SUPERFAMILY SSF53187 44 219 5.02E-52 T 12-10-2018 Amet_1982 d8e84acf077977dd1cdbefe571495c84 222 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 46 216 1.3E-47 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 Gene3D G3DSA:1.10.287.990 36 110 3.3E-22 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 PIRSF PIRSF000349 1 225 1.3E-78 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 SUPERFAMILY SSF46609 15 111 1.31E-29 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 120 220 2.1E-41 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 19 110 6.6E-25 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 Gene3D G3DSA:2.40.500.20 115 225 4.3E-48 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 SUPERFAMILY SSF54719 117 224 3.93E-45 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 PRINTS PR01703 Manganese superoxide dismutase signature 43 56 7.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 PRINTS PR01703 Manganese superoxide dismutase signature 149 157 7.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 PRINTS PR01703 Manganese superoxide dismutase signature 93 106 7.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 PRINTS PR01703 Manganese superoxide dismutase signature 22 33 7.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 PRINTS PR01703 Manganese superoxide dismutase signature 185 197 7.7E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_1897 9f82f2e58b0121dc049f9a364f0177a5 225 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 187 194 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Amet_4130 8fdc085eabca8fd03df6eb23404b77f2 298 PIRSF PIRSF003097 1 298 5.6E-83 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Amet_4130 8fdc085eabca8fd03df6eb23404b77f2 298 Pfam PF02687 FtsX-like permease family 200 293 1.6E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_4130 8fdc085eabca8fd03df6eb23404b77f2 298 Gene3D G3DSA:3.30.70.3040 56 157 2.4E-7 T 12-10-2018 Amet_3376 8fa1b1e0f7129480627cca6eb43cf7b8 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 421 5.1E-147 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_3376 8fa1b1e0f7129480627cca6eb43cf7b8 425 Gene3D G3DSA:3.40.640.10 5 287 3.5E-108 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3376 8fa1b1e0f7129480627cca6eb43cf7b8 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 421 2.2E-203 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 Amet_3376 8fa1b1e0f7129480627cca6eb43cf7b8 425 Gene3D G3DSA:3.90.1150.10 291 425 1.4E-46 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3376 8fa1b1e0f7129480627cca6eb43cf7b8 425 SUPERFAMILY SSF53383 6 422 2.24E-130 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3376 8fa1b1e0f7129480627cca6eb43cf7b8 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_3376 8fa1b1e0f7129480627cca6eb43cf7b8 425 PIRSF PIRSF001434 1 425 3.0E-130 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_4516 5159ea2df7894dfcfe380a85fa3592d5 358 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 358 57.34 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Amet_4516 5159ea2df7894dfcfe380a85fa3592d5 358 Gene3D G3DSA:3.90.1150.10 10 351 3.2E-114 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_4516 5159ea2df7894dfcfe380a85fa3592d5 358 SUPERFAMILY SSF53383 4 358 5.11E-84 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_4516 5159ea2df7894dfcfe380a85fa3592d5 358 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 357 4.6E-103 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Amet_4516 5159ea2df7894dfcfe380a85fa3592d5 358 Gene3D G3DSA:3.40.640.10 45 270 3.2E-114 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_4516 5159ea2df7894dfcfe380a85fa3592d5 358 Pfam PF00155 Aminotransferase class I and II 31 354 1.3E-57 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_4516 5159ea2df7894dfcfe380a85fa3592d5 358 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 222 231 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Amet_4282 4c8deb567b522e7c4e2ca2ebb739518d 120 Gene3D G3DSA:3.40.630.30 2 120 2.5E-30 T 12-10-2018 Amet_4282 4c8deb567b522e7c4e2ca2ebb739518d 120 SUPERFAMILY SSF55729 3 116 3.71E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_4282 4c8deb567b522e7c4e2ca2ebb739518d 120 Pfam PF00583 Acetyltransferase (GNAT) family 7 97 1.8E-13 T 12-10-2018 IPR000182 GNAT domain Amet_3905 d245ded722f238d30f0e2ac7cab271c2 323 SMART SM00382 34 217 1.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3905 d245ded722f238d30f0e2ac7cab271c2 323 Pfam PF00005 ABC transporter 26 168 6.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3905 d245ded722f238d30f0e2ac7cab271c2 323 SUPERFAMILY SSF52540 7 228 1.17E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3905 d245ded722f238d30f0e2ac7cab271c2 323 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3905 d245ded722f238d30f0e2ac7cab271c2 323 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 17 311 2.4E-107 T 12-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 Amet_3905 d245ded722f238d30f0e2ac7cab271c2 323 Gene3D G3DSA:3.40.50.300 1 246 2.6E-67 T 12-10-2018 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 PRINTS PR01607 Apyrase family signature 447 466 1.0E-34 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 PRINTS PR01607 Apyrase family signature 228 251 1.0E-34 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 PRINTS PR01607 Apyrase family signature 374 397 1.0E-34 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 PRINTS PR01607 Apyrase family signature 256 276 1.0E-34 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 PRINTS PR01607 Apyrase family signature 34 52 1.0E-34 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 PRINTS PR01607 Apyrase family signature 202 219 1.0E-34 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 Pfam PF02872 5'-nucleotidase, C-terminal domain 320 473 1.4E-50 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 Gene3D G3DSA:3.10.350.10 540 596 2.3E-13 T 12-10-2018 IPR036779 LysM domain superfamily Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 SMART SM00257 550 594 6.4E-11 T 12-10-2018 IPR018392 LysM domain Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 Pfam PF00149 Calcineurin-like phosphoesterase 38 245 5.9E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 Gene3D G3DSA:3.90.780.10 320 510 2.4E-66 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 Gene3D G3DSA:3.60.21.10 29 317 3.1E-92 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 SUPERFAMILY SSF56300 33 314 1.5E-84 T 12-10-2018 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 SUPERFAMILY SSF55816 317 507 2.09E-62 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 SUPERFAMILY SSF54106 549 595 4.84E-10 T 12-10-2018 Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 Pfam PF01476 LysM domain 551 594 3.9E-12 T 12-10-2018 IPR018392 LysM domain Amet_3610 419ecc0f0d84c5d92b33216637e1819b 596 ProSitePatterns PS00785 5'-nucleotidase signature 1. 36 48 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_1913 0309cb3fe60c3a0d96cd30b51fa43ea2 197 Gene3D G3DSA:1.10.357.10 3 197 2.0E-33 T 12-10-2018 Amet_1913 0309cb3fe60c3a0d96cd30b51fa43ea2 197 SUPERFAMILY SSF46689 1 75 8.48E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1913 0309cb3fe60c3a0d96cd30b51fa43ea2 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 3.9E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1913 0309cb3fe60c3a0d96cd30b51fa43ea2 197 SUPERFAMILY SSF48498 131 194 8.45E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_1913 0309cb3fe60c3a0d96cd30b51fa43ea2 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1913 0309cb3fe60c3a0d96cd30b51fa43ea2 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_2465 199b50e5f27660067df34693364c81e1 232 Gene3D G3DSA:3.40.1350.60 81 232 1.0E-47 T 12-10-2018 Amet_2465 199b50e5f27660067df34693364c81e1 232 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 3 231 50.214 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein Amet_2465 199b50e5f27660067df34693364c81e1 232 Pfam PF03749 Sugar fermentation stimulation protein 16 224 3.8E-72 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein Amet_2465 199b50e5f27660067df34693364c81e1 232 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 231 6.7E-63 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein Amet_2465 199b50e5f27660067df34693364c81e1 232 Gene3D G3DSA:2.40.50.580 4 80 1.2E-23 T 12-10-2018 Amet_0097 e3fa7308086023bede3222ea0586590f 319 Gene3D G3DSA:3.60.70.12 1 304 2.1E-109 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amet_0097 e3fa7308086023bede3222ea0586590f 319 SUPERFAMILY SSF56266 4 307 4.97E-66 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amet_0097 e3fa7308086023bede3222ea0586590f 319 Pfam PF03576 Peptidase family S58 5 307 1.4E-53 T 12-10-2018 IPR005321 Peptidase S58, DmpA Amet_2064 e261c238da8dad4978f8ff99b17584f4 329 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2064 e261c238da8dad4978f8ff99b17584f4 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 7.1E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2064 e261c238da8dad4978f8ff99b17584f4 329 Pfam PF00005 ABC transporter 26 182 2.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2064 e261c238da8dad4978f8ff99b17584f4 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.3E-32 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2064 e261c238da8dad4978f8ff99b17584f4 329 SUPERFAMILY SSF52540 5 253 5.32E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2064 e261c238da8dad4978f8ff99b17584f4 329 SMART SM00382 34 232 2.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2064 e261c238da8dad4978f8ff99b17584f4 329 Gene3D G3DSA:3.40.50.300 3 327 6.1E-105 T 12-10-2018 Amet_3230 f8f75f2984b42723251e336a2435e008 326 SUPERFAMILY SSF100950 64 321 6.11E-67 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_3230 f8f75f2984b42723251e336a2435e008 326 Gene3D G3DSA:1.10.10.60 7 59 1.4E-16 T 12-10-2018 Amet_3230 f8f75f2984b42723251e336a2435e008 326 Gene3D G3DSA:3.40.50.1360 61 323 2.2E-76 T 12-10-2018 Amet_3230 f8f75f2984b42723251e336a2435e008 326 Pfam PF04198 Putative sugar-binding domain 66 319 3.3E-67 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Amet_1481 a4bda14880192f47c3ca910d6c7eb692 284 SUPERFAMILY SSF52540 2 221 2.92E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1481 a4bda14880192f47c3ca910d6c7eb692 284 SMART SM00382 28 214 4.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1481 a4bda14880192f47c3ca910d6c7eb692 284 Gene3D G3DSA:3.40.50.300 1 237 3.3E-57 T 12-10-2018 Amet_1481 a4bda14880192f47c3ca910d6c7eb692 284 Pfam PF00005 ABC transporter 20 159 4.8E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1481 a4bda14880192f47c3ca910d6c7eb692 284 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 SUPERFAMILY SSF142984 352 435 1.44E-25 T 12-10-2018 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Gene3D G3DSA:3.40.50.11540 164 342 3.8E-81 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 SUPERFAMILY SSF52833 5 96 2.24E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 SUPERFAMILY SSF140490 436 538 7.98E-40 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 SUPERFAMILY SSF54862 525 596 2.59E-16 T 12-10-2018 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 453 464 - T 12-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 580 591 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 SMART SM00928 440 485 1.3E-23 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 159 331 1.2E-47 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Gene3D G3DSA:3.30.70.20 543 598 3.6E-15 T 12-10-2018 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 441 525 2.6E-34 T 12-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Gene3D G3DSA:1.20.1440.230 438 540 9.2E-36 T 12-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 SUPERFAMILY SSF142019 111 351 3.79E-95 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Gene3D G3DSA:3.40.30.10 4 99 1.4E-26 T 12-10-2018 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Pfam PF00037 4Fe-4S binding domain 574 595 8.2E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Pfam PF00037 4Fe-4S binding domain 544 565 6.3E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Pfam PF10531 SLBB domain 356 402 2.9E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4100 b4b2f08d85aee5f9febdee3dc5c9140d 598 Gene3D G3DSA:3.10.20.600 343 437 5.8E-34 T 12-10-2018 Amet_3520 7977e1ebc54648ebabf2cca2bdd9c381 454 Gene3D G3DSA:3.40.50.1980 12 420 2.7E-172 T 12-10-2018 Amet_3520 7977e1ebc54648ebabf2cca2bdd9c381 454 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 41 48 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Amet_3520 7977e1ebc54648ebabf2cca2bdd9c381 454 Gene3D G3DSA:3.40.50.1980 23 159 2.7E-172 T 12-10-2018 Amet_3520 7977e1ebc54648ebabf2cca2bdd9c381 454 Gene3D G3DSA:3.40.50.1980 160 427 2.7E-172 T 12-10-2018 Amet_3520 7977e1ebc54648ebabf2cca2bdd9c381 454 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 23 437 2.7E-127 T 12-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Amet_3520 7977e1ebc54648ebabf2cca2bdd9c381 454 SUPERFAMILY SSF53807 3 453 3.6E-151 T 12-10-2018 Amet_3520 7977e1ebc54648ebabf2cca2bdd9c381 454 Gene3D G3DSA:1.20.89.10 266 444 2.7E-172 T 12-10-2018 Amet_3520 7977e1ebc54648ebabf2cca2bdd9c381 454 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 104 118 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Amet_3520 7977e1ebc54648ebabf2cca2bdd9c381 454 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 11 445 3.9E-141 T 12-10-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Amet_1833 7d41e968e8ff41edf8b48f15209156b4 238 Pfam PF07722 Peptidase C26 15 210 6.7E-59 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 Amet_1833 7d41e968e8ff41edf8b48f15209156b4 238 SUPERFAMILY SSF52317 2 235 3.63E-42 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_1833 7d41e968e8ff41edf8b48f15209156b4 238 Gene3D G3DSA:3.40.50.880 1 238 8.2E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_2799 b51e517cc727b6ee4e183444dc1ad284 231 Gene3D G3DSA:3.40.50.1580 1 231 6.6E-67 T 12-10-2018 Amet_2799 b51e517cc727b6ee4e183444dc1ad284 231 SUPERFAMILY SSF53167 2 231 9.27E-64 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Amet_2799 b51e517cc727b6ee4e183444dc1ad284 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 230 5.9E-63 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Amet_2799 b51e517cc727b6ee4e183444dc1ad284 231 Pfam PF01048 Phosphorylase superfamily 2 228 7.1E-48 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Amet_3082 4f3da8814e726927bf81c488cfe46545 502 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 17 436 3.0E-148 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Amet_1834 8ae494570d137ee5cefa669ed7311596 308 Pfam PF03773 Predicted permease 7 302 3.0E-60 T 12-10-2018 IPR005524 Predicted permease DUF318 Amet_0059 204be6658e27b7aa0110e9d77889459a 242 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 5 198 6.9E-47 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amet_0059 204be6658e27b7aa0110e9d77889459a 242 Pfam PF13241 Putative NAD(P)-binding 7 116 1.2E-28 T 12-10-2018 Amet_0059 204be6658e27b7aa0110e9d77889459a 242 SUPERFAMILY SSF75615 109 206 3.66E-20 T 12-10-2018 Amet_0059 204be6658e27b7aa0110e9d77889459a 242 Gene3D G3DSA:3.40.50.720 4 131 4.4E-41 T 12-10-2018 Amet_0059 204be6658e27b7aa0110e9d77889459a 242 Gene3D G3DSA:1.10.8.610 132 202 1.7E-6 T 12-10-2018 Amet_0059 204be6658e27b7aa0110e9d77889459a 242 SUPERFAMILY SSF51735 3 113 6.18E-22 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0059 204be6658e27b7aa0110e9d77889459a 242 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 3.3E-9 T 12-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Amet_2773 22fefc2c8458d83a083ece1c53bc384b 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 2.2E-23 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2773 22fefc2c8458d83a083ece1c53bc384b 63 Gene3D G3DSA:2.30.170.40 19 63 1.2E-20 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2773 22fefc2c8458d83a083ece1c53bc384b 63 Pfam PF00830 Ribosomal L28 family 3 58 3.1E-23 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2773 22fefc2c8458d83a083ece1c53bc384b 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 18.483 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2773 22fefc2c8458d83a083ece1c53bc384b 63 SUPERFAMILY SSF143800 1 62 3.53E-25 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0111 ec62c414ebf3a609b0ba6eeeb843472f 255 PIRSF PIRSF005902 1 255 5.3E-91 T 12-10-2018 IPR001130 TatD family GO:0016788 Amet_0111 ec62c414ebf3a609b0ba6eeeb843472f 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.5E-92 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Amet_0111 ec62c414ebf3a609b0ba6eeeb843472f 255 Gene3D G3DSA:3.20.20.140 1 254 8.0E-107 T 12-10-2018 Amet_0111 ec62c414ebf3a609b0ba6eeeb843472f 255 Pfam PF01026 TatD related DNase 3 253 8.4E-86 T 12-10-2018 IPR001130 TatD family GO:0016788 Amet_0111 ec62c414ebf3a609b0ba6eeeb843472f 255 SUPERFAMILY SSF51556 2 254 2.2E-96 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_0111 ec62c414ebf3a609b0ba6eeeb843472f 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Amet_0111 ec62c414ebf3a609b0ba6eeeb843472f 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Amet_0016 b57c2441b390070a7ee14e98e4ed55b1 481 SUPERFAMILY SSF53383 29 478 1.77E-109 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_0016 b57c2441b390070a7ee14e98e4ed55b1 481 Gene3D G3DSA:3.40.640.10 79 313 2.2E-59 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0016 b57c2441b390070a7ee14e98e4ed55b1 481 Pfam PF02347 Glycine cleavage system P-protein 26 297 2.5E-13 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Amet_0016 b57c2441b390070a7ee14e98e4ed55b1 481 Gene3D G3DSA:3.90.1150.10 331 464 2.8E-48 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0016 b57c2441b390070a7ee14e98e4ed55b1 481 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 4 479 59.108 T 12-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 Amet_1674 b13708aaeb2d312b7c0c27203b942dae 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 1.9E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1674 b13708aaeb2d312b7c0c27203b942dae 217 SUPERFAMILY SSF161098 11 199 1.83E-50 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1674 b13708aaeb2d312b7c0c27203b942dae 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 108 1.0E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Amet_1674 b13708aaeb2d312b7c0c27203b942dae 217 Gene3D G3DSA:1.10.3720.10 1 216 9.1E-65 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1340 658024cba4eb1ced7cbbfb5c63d03d17 396 Gene3D G3DSA:2.40.50.100 55 252 3.4E-43 T 12-10-2018 Amet_1340 658024cba4eb1ced7cbbfb5c63d03d17 396 SUPERFAMILY SSF111369 60 139 3.27E-6 T 12-10-2018 Amet_1340 658024cba4eb1ced7cbbfb5c63d03d17 396 Gene3D G3DSA:2.40.420.20 324 380 3.4E-43 T 12-10-2018 Amet_1340 658024cba4eb1ced7cbbfb5c63d03d17 396 Pfam PF13533 Biotin-lipoyl like 62 102 1.6E-8 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Amet_1340 658024cba4eb1ced7cbbfb5c63d03d17 396 Pfam PF13437 HlyD family secretion protein 219 310 1.9E-10 T 12-10-2018 Amet_1340 658024cba4eb1ced7cbbfb5c63d03d17 396 Gene3D G3DSA:1.10.287.470 89 218 3.4E-43 T 12-10-2018 Amet_1340 658024cba4eb1ced7cbbfb5c63d03d17 396 Gene3D G3DSA:2.40.30.170 44 323 3.4E-43 T 12-10-2018 Amet_0132 7653d6f3ad24b1ef01b7567725e02642 124 Gene3D G3DSA:1.10.10.10 6 124 2.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0132 7653d6f3ad24b1ef01b7567725e02642 124 SUPERFAMILY SSF46785 2 76 5.12E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0132 7653d6f3ad24b1ef01b7567725e02642 124 SMART SM00345 13 72 5.3E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0132 7653d6f3ad24b1ef01b7567725e02642 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 4.7E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4330 13029b1377c47dde5c4cb23ff9f96626 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 80 7.3E-29 T 12-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 Amet_4330 13029b1377c47dde5c4cb23ff9f96626 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Amet_4330 13029b1377c47dde5c4cb23ff9f96626 84 PRINTS PR00160 Glutaredoxin signature 46 59 7.1E-16 T 12-10-2018 IPR014025 Glutaredoxin subgroup Amet_4330 13029b1377c47dde5c4cb23ff9f96626 84 PRINTS PR00160 Glutaredoxin signature 60 73 7.1E-16 T 12-10-2018 IPR014025 Glutaredoxin subgroup Amet_4330 13029b1377c47dde5c4cb23ff9f96626 84 PRINTS PR00160 Glutaredoxin signature 4 22 7.1E-16 T 12-10-2018 IPR014025 Glutaredoxin subgroup Amet_4330 13029b1377c47dde5c4cb23ff9f96626 84 SUPERFAMILY SSF52833 1 83 1.52E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_4330 13029b1377c47dde5c4cb23ff9f96626 84 Gene3D G3DSA:3.40.30.10 1 83 4.2E-27 T 12-10-2018 Amet_4330 13029b1377c47dde5c4cb23ff9f96626 84 Pfam PF00462 Glutaredoxin 4 63 3.2E-19 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Amet_0561 4ce9e40650dafa694994c14b45abcec6 235 Gene3D G3DSA:3.20.20.190 1 235 2.3E-84 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amet_0561 4ce9e40650dafa694994c14b45abcec6 235 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 232 5.3E-50 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Amet_0561 4ce9e40650dafa694994c14b45abcec6 235 SUPERFAMILY SSF51695 1 234 5.23E-79 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Amet_4318 8cb7e2722a7d2115963c5dd0707b6a82 272 Pfam PF07885 Ion channel 18 102 9.3E-12 T 12-10-2018 IPR013099 Potassium channel domain Amet_4318 8cb7e2722a7d2115963c5dd0707b6a82 272 Gene3D G3DSA:2.60.40.1400 108 259 4.4E-14 T 12-10-2018 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic Amet_4318 8cb7e2722a7d2115963c5dd0707b6a82 272 Gene3D G3DSA:1.10.287.70 10 107 4.4E-14 T 12-10-2018 Amet_4318 8cb7e2722a7d2115963c5dd0707b6a82 272 SUPERFAMILY SSF81324 6 114 4.06E-17 T 12-10-2018 Amet_4207 04dcbcc1fb891758bb55736daab3086f 193 Pfam PF00156 Phosphoribosyl transferase domain 37 151 9.2E-20 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amet_4207 04dcbcc1fb891758bb55736daab3086f 193 Gene3D G3DSA:3.40.50.2020 6 192 7.5E-60 T 12-10-2018 Amet_4207 04dcbcc1fb891758bb55736daab3086f 193 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 193 25.953 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4207 04dcbcc1fb891758bb55736daab3086f 193 SUPERFAMILY SSF53271 6 150 9.57E-40 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_4207 04dcbcc1fb891758bb55736daab3086f 193 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 7 190 3.5E-62 T 12-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4098 10e710e0c821071feb072143d41633dc 528 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 451 478 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Amet_4098 10e710e0c821071feb072143d41633dc 528 Pfam PF00384 Molybdopterin oxidoreductase 2 328 1.6E-70 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4098 10e710e0c821071feb072143d41633dc 528 Gene3D G3DSA:2.40.40.20 409 525 7.8E-40 T 12-10-2018 Amet_4098 10e710e0c821071feb072143d41633dc 528 Pfam PF01568 Molydopterin dinucleotide binding domain 412 518 2.3E-29 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Amet_4098 10e710e0c821071feb072143d41633dc 528 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 275 292 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Amet_4098 10e710e0c821071feb072143d41633dc 528 Gene3D G3DSA:3.40.228.10 1 184 5.2E-151 T 12-10-2018 Amet_4098 10e710e0c821071feb072143d41633dc 528 SUPERFAMILY SSF53706 1 363 7.72E-139 T 12-10-2018 Amet_4098 10e710e0c821071feb072143d41633dc 528 SUPERFAMILY SSF50692 367 525 4.07E-43 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amet_4098 10e710e0c821071feb072143d41633dc 528 Gene3D G3DSA:3.40.50.740 185 371 5.2E-151 T 12-10-2018 Amet_2492 1685524e12486c0cc6e561f7ad4cc0a8 346 SMART SM00382 168 312 9.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2492 1685524e12486c0cc6e561f7ad4cc0a8 346 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 47 327 6.4E-107 T 12-10-2018 IPR014217 Sporulation stage III, protein AA Amet_2492 1685524e12486c0cc6e561f7ad4cc0a8 346 SUPERFAMILY SSF52540 109 297 8.8E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2492 1685524e12486c0cc6e561f7ad4cc0a8 346 Gene3D G3DSA:3.40.50.300 145 314 6.8E-22 T 12-10-2018 Amet_2737 e9dfed5d757087d4b969b74f6711b39b 511 SUPERFAMILY SSF54211 12 169 8.34E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_2737 e9dfed5d757087d4b969b74f6711b39b 511 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.1E-48 T 12-10-2018 Amet_2737 e9dfed5d757087d4b969b74f6711b39b 511 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 11 503 3.2E-187 T 12-10-2018 IPR004482 Mg chelatase-related protein Amet_2737 e9dfed5d757087d4b969b74f6711b39b 511 Gene3D G3DSA:3.30.230.10 5 170 1.6E-21 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_2737 e9dfed5d757087d4b969b74f6711b39b 511 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 408 503 4.1E-29 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Amet_2737 e9dfed5d757087d4b969b74f6711b39b 511 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 398 2.4E-91 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain Amet_2737 e9dfed5d757087d4b969b74f6711b39b 511 SMART SM00382 212 396 2.6E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2737 e9dfed5d757087d4b969b74f6711b39b 511 Gene3D G3DSA:3.40.50.300 193 507 1.6E-60 T 12-10-2018 Amet_2737 e9dfed5d757087d4b969b74f6711b39b 511 SUPERFAMILY SSF52540 192 504 8.32E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 413 1.3E-168 T 12-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 1 415 47.155 T 12-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 Gene3D G3DSA:3.30.499.20 3 266 4.0E-104 T 12-10-2018 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 Gene3D G3DSA:3.30.499.10 269 422 8.4E-57 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 413 2.8E-169 T 12-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 PRINTS PR00415 Aconitase family signature 186 199 5.2E-21 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 PRINTS PR00415 Aconitase family signature 200 213 5.2E-21 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 PRINTS PR00415 Aconitase family signature 124 139 5.2E-21 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 PRINTS PR00415 Aconitase family signature 348 361 5.2E-21 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 PRINTS PR00415 Aconitase family signature 110 123 5.2E-21 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 SUPERFAMILY SSF53732 5 415 1.96E-138 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Amet_2963 350b3eb81a7129ae2e0d8ce422852fdd 425 Pfam PF00330 Aconitase family (aconitate hydratase) 74 407 5.5E-98 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_1286 ce8214ad4a483e9574669613023f8dd0 541 Gene3D G3DSA:3.40.50.1390 2 134 2.6E-39 T 12-10-2018 Amet_1286 ce8214ad4a483e9574669613023f8dd0 541 Pfam PF07508 Recombinase 184 313 1.3E-18 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_1286 ce8214ad4a483e9574669613023f8dd0 541 SUPERFAMILY SSF53041 4 151 2.35E-33 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_1286 ce8214ad4a483e9574669613023f8dd0 541 Pfam PF13408 Recombinase zinc beta ribbon domain 329 390 1.3E-11 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_1286 ce8214ad4a483e9574669613023f8dd0 541 SMART SM00857 4 151 4.2E-53 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_1286 ce8214ad4a483e9574669613023f8dd0 541 Pfam PF00239 Resolvase, N terminal domain 4 151 4.4E-36 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_2653 a3250a5547e133de2104bf430a5f077b 397 Gene3D G3DSA:3.90.1150.10 27 391 1.9E-136 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_2653 a3250a5547e133de2104bf430a5f077b 397 SUPERFAMILY SSF53383 6 397 6.72E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2653 a3250a5547e133de2104bf430a5f077b 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 230 254 8.7E-16 T 12-10-2018 Amet_2653 a3250a5547e133de2104bf430a5f077b 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 8.7E-16 T 12-10-2018 Amet_2653 a3250a5547e133de2104bf430a5f077b 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 8.7E-16 T 12-10-2018 Amet_2653 a3250a5547e133de2104bf430a5f077b 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 8.7E-16 T 12-10-2018 Amet_2653 a3250a5547e133de2104bf430a5f077b 397 Gene3D G3DSA:3.40.640.10 64 286 1.9E-136 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_2653 a3250a5547e133de2104bf430a5f077b 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amet_2653 a3250a5547e133de2104bf430a5f077b 397 Pfam PF00155 Aminotransferase class I and II 33 391 6.0E-75 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_3542 e0d03bb6e85d27f75831cf605514fe93 307 SUPERFAMILY SSF52540 55 258 3.81E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3542 e0d03bb6e85d27f75831cf605514fe93 307 Gene3D G3DSA:3.40.50.300 47 212 7.8E-29 T 12-10-2018 Amet_3542 e0d03bb6e85d27f75831cf605514fe93 307 Pfam PF07728 AAA domain (dynein-related subfamily) 62 194 2.3E-18 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Amet_4335 0bd00501e50a4e188c1d7230dd384c54 340 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 321 4.5E-84 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Amet_4335 0bd00501e50a4e188c1d7230dd384c54 340 SUPERFAMILY SSF51395 2 337 4.79E-112 T 12-10-2018 Amet_4335 0bd00501e50a4e188c1d7230dd384c54 340 Gene3D G3DSA:3.20.20.70 1 338 4.4E-123 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0750 5791865d13f825da9e840ebfee2e536f 143 Pfam PF02915 Rubrerythrin 25 136 4.0E-13 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Amet_0750 5791865d13f825da9e840ebfee2e536f 143 SUPERFAMILY SSF47240 16 141 6.91E-31 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_0750 5791865d13f825da9e840ebfee2e536f 143 Gene3D G3DSA:1.20.1260.10 13 142 6.1E-24 T 12-10-2018 IPR012347 Ferritin-like Amet_4749 f8066f189c7eeedc7a01924f5ecab005 159 PIRSF PIRSF004505 1 159 8.6E-54 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Amet_4749 f8066f189c7eeedc7a01924f5ecab005 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 2.3E-57 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Amet_4749 f8066f189c7eeedc7a01924f5ecab005 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.288 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Amet_4749 f8066f189c7eeedc7a01924f5ecab005 159 Gene3D G3DSA:3.40.1280.10 1 159 6.3E-65 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amet_4749 f8066f189c7eeedc7a01924f5ecab005 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 3.7E-59 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Amet_4749 f8066f189c7eeedc7a01924f5ecab005 159 SUPERFAMILY SSF75217 1 157 1.96E-59 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 Gene3D G3DSA:2.40.50.100 29 94 2.7E-28 T 12-10-2018 Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 SUPERFAMILY SSF110324 11 92 5.93E-33 T 12-10-2018 Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 Pfam PF01016 Ribosomal L27 protein 11 90 1.2E-35 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 PRINTS PR00063 Ribosomal protein L27 signature 63 87 1.5E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 PRINTS PR00063 Ribosomal protein L27 signature 13 37 1.5E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 PRINTS PR00063 Ribosomal protein L27 signature 38 62 1.5E-38 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 37 78 5.0E-14 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 10 93 27.728 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 TIGRFAM TIGR00062 L27: ribosomal protein bL27 10 90 3.0E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2305 dd6fb473527f82ea57f14df24e377cb4 98 ProSitePatterns PS00831 Ribosomal protein L27 signature. 43 57 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2360 894bfc34600cedad6e58b926e0ec7aac 102 PIRSF PIRSF020408 1 102 6.6E-33 T 12-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 Amet_2360 894bfc34600cedad6e58b926e0ec7aac 102 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 3 90 4.4E-18 T 12-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Gene3D G3DSA:3.30.70.20 143 206 1.1E-162 T 12-10-2018 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 SUPERFAMILY SSF53920 191 549 6.28E-124 T 12-10-2018 IPR009016 Iron hydrogenase Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 225 508 1.7E-100 T 12-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 SUPERFAMILY SSF54862 77 216 6.7E-35 T 12-10-2018 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 78 4.1E-18 T 12-10-2018 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Pfam PF02256 Iron hydrogenase small subunit 522 548 3.4E-6 T 12-10-2018 IPR003149 Iron hydrogenase, small subunit Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 SMART SM00929 85 125 5.2E-17 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 140 512 5.8E-174 T 12-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Gene3D G3DSA:3.40.50.1780 207 511 1.1E-162 T 12-10-2018 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 SUPERFAMILY SSF54292 4 76 1.41E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 123 2.5E-16 T 12-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Pfam PF00037 4Fe-4S binding domain 142 158 1.0E-4 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Pfam PF00037 4Fe-4S binding domain 188 206 1.5E-4 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Gene3D G3DSA:3.40.950.10 273 502 1.1E-162 T 12-10-2018 Amet_4107 5ff962b3a24607693b591e7b3b72c83e 551 Gene3D G3DSA:3.10.20.740 3 124 1.6E-40 T 12-10-2018 Amet_2048 05e88dd726184b3f4bbbfadaa989c881 267 SMART SM00382 31 238 2.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2048 05e88dd726184b3f4bbbfadaa989c881 267 Gene3D G3DSA:3.40.50.300 4 264 5.0E-66 T 12-10-2018 Amet_2048 05e88dd726184b3f4bbbfadaa989c881 267 Pfam PF00005 ABC transporter 24 180 6.4E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2048 05e88dd726184b3f4bbbfadaa989c881 267 SUPERFAMILY SSF52540 4 259 3.7E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 SMART SM00911 278 367 0.0039 T 12-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 SUPERFAMILY SSF55874 335 465 2.49E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 Pfam PF12282 Signal transduction histidine kinase 2 146 8.8E-32 T 12-10-2018 IPR022066 Signal transduction histidine kinase, N-terminal Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 467 9.2E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 Gene3D G3DSA:3.30.450.20 157 227 5.0E-5 T 12-10-2018 Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 Gene3D G3DSA:3.30.450.20 234 329 1.6E-11 T 12-10-2018 Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 SMART SM00387 373 469 2.6E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 SUPERFAMILY SSF55785 169 269 3.43E-6 T 12-10-2018 IPR035965 PAS domain superfamily Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 Gene3D G3DSA:3.30.565.10 334 469 5.1E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0253 fc7bb6ae4ff423fdc4cef5c6eb161a9d 469 Pfam PF07568 Histidine kinase 278 349 1.6E-22 T 12-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain Amet_3808 c3f3c75487488d48ddcce78832d84bca 609 SUPERFAMILY SSF90123 17 336 1.44E-41 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_3808 c3f3c75487488d48ddcce78832d84bca 609 Pfam PF00005 ABC transporter 372 521 1.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3808 c3f3c75487488d48ddcce78832d84bca 609 Pfam PF00664 ABC transporter transmembrane region 34 292 9.8E-14 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amet_3808 c3f3c75487488d48ddcce78832d84bca 609 Gene3D G3DSA:1.20.1560.10 2 339 1.7E-35 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_3808 c3f3c75487488d48ddcce78832d84bca 609 SMART SM00382 381 567 6.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3808 c3f3c75487488d48ddcce78832d84bca 609 SUPERFAMILY SSF52540 349 590 3.4E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3808 c3f3c75487488d48ddcce78832d84bca 609 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3808 c3f3c75487488d48ddcce78832d84bca 609 Gene3D G3DSA:3.40.50.300 345 597 1.1E-86 T 12-10-2018 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 Gene3D G3DSA:3.40.50.620 9 329 9.3E-137 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 Gene3D G3DSA:1.10.240.10 189 298 9.3E-137 T 12-10-2018 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 2.7E-27 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 19 35 2.7E-27 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 2.7E-27 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 2.7E-27 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 6 330 8.7E-109 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 Pfam PF00579 tRNA synthetases class I (W and Y) 7 283 2.7E-76 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 6 331 40.291 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Amet_1200 29209d3eb07f9909b4c8da6584e3ec70 333 SUPERFAMILY SSF52374 8 330 3.34E-97 T 12-10-2018 Amet_3145 ab3a2ed9ae3d4ed92dc8f4fccb3e83bf 58 Pfam PF05979 Bacterial protein of unknown function (DUF896) 7 58 8.5E-20 T 12-10-2018 IPR009242 Protein of unknown function DUF896 Amet_3145 ab3a2ed9ae3d4ed92dc8f4fccb3e83bf 58 Gene3D G3DSA:1.10.287.540 3 57 3.1E-19 T 12-10-2018 Amet_3145 ab3a2ed9ae3d4ed92dc8f4fccb3e83bf 58 SUPERFAMILY SSF158221 3 44 9.81E-13 T 12-10-2018 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 SUPERFAMILY SSF56024 268 465 4.04E-48 T 12-10-2018 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 55 1.8E-10 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal Amet_4655 1f395fea53266c77efade8bb8231f00f 479 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 7 479 9.0E-166 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 Gene3D G3DSA:3.30.870.10 309 455 1.4E-25 T 12-10-2018 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 SUPERFAMILY SSF56024 69 309 2.01E-54 T 12-10-2018 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 Gene3D G3DSA:3.30.870.10 110 304 2.6E-47 T 12-10-2018 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 Hamap MF_01916 Cardiolipin synthase. 7 479 44.156 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 Pfam PF13091 PLD-like domain 322 446 1.7E-25 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 Pfam PF13091 PLD-like domain 134 252 7.4E-12 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 SMART SM00155 216 243 1.1E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Amet_4655 1f395fea53266c77efade8bb8231f00f 479 SMART SM00155 392 419 0.014 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Amet_0346 a816e6e076e607a2b7798df712abc065 232 Pfam PF00119 ATP synthase A chain 22 227 9.1E-57 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0346 a816e6e076e607a2b7798df712abc065 232 ProSitePatterns PS00449 ATP synthase a subunit signature. 157 166 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0346 a816e6e076e607a2b7798df712abc065 232 PRINTS PR00123 ATP synthase A subunit signature 138 153 8.5E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0346 a816e6e076e607a2b7798df712abc065 232 PRINTS PR00123 ATP synthase A subunit signature 79 95 8.5E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0346 a816e6e076e607a2b7798df712abc065 232 PRINTS PR00123 ATP synthase A subunit signature 214 229 8.5E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0346 a816e6e076e607a2b7798df712abc065 232 PRINTS PR00123 ATP synthase A subunit signature 154 176 8.5E-16 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0346 a816e6e076e607a2b7798df712abc065 232 SUPERFAMILY SSF81336 73 227 1.12E-33 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0346 a816e6e076e607a2b7798df712abc065 232 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 232 13.989 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0346 a816e6e076e607a2b7798df712abc065 232 Gene3D G3DSA:1.20.120.220 71 232 1.2E-37 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0346 a816e6e076e607a2b7798df712abc065 232 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 19 228 2.8E-35 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 12 84 8.4E-17 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 566 26.081 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 Gene3D G3DSA:3.30.1360.70 1 106 1.1E-31 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 123 134 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 SMART SM00836 451 566 7.9E-44 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 Pfam PF05746 DALR anticodon binding domain 451 566 1.8E-32 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 SMART SM01016 6 85 2.4E-23 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 566 2.1E-163 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 PRINTS PR01038 Arginyl-tRNA synthetase signature 154 167 1.3E-22 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 PRINTS PR01038 Arginyl-tRNA synthetase signature 115 130 1.3E-22 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 PRINTS PR01038 Arginyl-tRNA synthetase signature 298 319 1.3E-22 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 PRINTS PR01038 Arginyl-tRNA synthetase signature 130 146 1.3E-22 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 Gene3D G3DSA:1.10.730.10 445 566 3.6E-37 T 12-10-2018 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 Gene3D G3DSA:3.40.50.620 108 444 1.1E-127 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 SUPERFAMILY SSF52374 109 445 2.18E-96 T 12-10-2018 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 SUPERFAMILY SSF55190 6 106 1.57E-24 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 Pfam PF00750 tRNA synthetases class I (R) 95 437 2.6E-102 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Amet_1714 ed4122d906d7b7afdb69dbee391e4547 566 SUPERFAMILY SSF47323 447 566 1.05E-33 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2051 06cf2255151727254d2a7d0422605597 265 Pfam PF05971 Protein of unknown function (DUF890) 100 168 1.2E-5 T 12-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 Amet_2051 06cf2255151727254d2a7d0422605597 265 SUPERFAMILY SSF53335 121 172 4.43E-7 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2051 06cf2255151727254d2a7d0422605597 265 SUPERFAMILY SSF53335 107 256 4.98E-6 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2051 06cf2255151727254d2a7d0422605597 265 Gene3D G3DSA:3.40.50.150 8 265 3.3E-29 T 12-10-2018 Amet_4735 b4603860f401b3cb682bd19fff0e2bf7 430 Pfam PF05569 BlaR1 peptidase M56 3 286 9.1E-51 T 12-10-2018 IPR008756 Peptidase M56 Amet_0935 30b4133a23c348e12a888b6be26db19c 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_0935 30b4133a23c348e12a888b6be26db19c 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 68 403 1.5E-91 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_0935 30b4133a23c348e12a888b6be26db19c 406 SUPERFAMILY SSF55021 263 348 7.45E-8 T 12-10-2018 Amet_0935 30b4133a23c348e12a888b6be26db19c 406 SUPERFAMILY SSF55021 336 405 1.06E-15 T 12-10-2018 Amet_0935 30b4133a23c348e12a888b6be26db19c 406 PIRSF PIRSF000726 54 406 5.5E-85 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_0935 30b4133a23c348e12a888b6be26db19c 406 PIRSF PIRSF000726 1 65 2.6E-11 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_0935 30b4133a23c348e12a888b6be26db19c 406 SUPERFAMILY SSF53633 3 246 3.27E-70 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_0935 30b4133a23c348e12a888b6be26db19c 406 Pfam PF13840 ACT domain 337 400 2.5E-19 T 12-10-2018 IPR027795 CASTOR, ACT domain Amet_0935 30b4133a23c348e12a888b6be26db19c 406 Gene3D G3DSA:3.30.2130.10 258 406 1.2E-25 T 12-10-2018 Amet_0935 30b4133a23c348e12a888b6be26db19c 406 Gene3D G3DSA:3.40.1160.10 1 256 1.4E-84 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_0935 30b4133a23c348e12a888b6be26db19c 406 Pfam PF00696 Amino acid kinase family 2 235 1.7E-51 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amet_3345 e57837918260e30eac5277a5a21232d6 280 SMART SM01092 180 274 0.0013 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Amet_3345 e57837918260e30eac5277a5a21232d6 280 SUPERFAMILY SSF56176 3 168 1.71E-31 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_3345 e57837918260e30eac5277a5a21232d6 280 Gene3D G3DSA:3.30.465.10 4 173 3.1E-32 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_3345 e57837918260e30eac5277a5a21232d6 280 SUPERFAMILY SSF55447 179 276 1.07E-12 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Amet_3345 e57837918260e30eac5277a5a21232d6 280 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 168 8.0E-29 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Amet_2445 6df766030db9879de07cf519f4b4a0fa 348 PIRSF PIRSF017617 1 348 6.9E-133 T 12-10-2018 IPR023603 Threonine aldolase Amet_2445 6df766030db9879de07cf519f4b4a0fa 348 SUPERFAMILY SSF53383 3 344 2.15E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2445 6df766030db9879de07cf519f4b4a0fa 348 Pfam PF01212 Beta-eliminating lyase 5 288 4.1E-99 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Amet_2445 6df766030db9879de07cf519f4b4a0fa 348 Gene3D G3DSA:3.40.640.10 1 248 1.1E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_2445 6df766030db9879de07cf519f4b4a0fa 348 Gene3D G3DSA:3.90.1150.10 249 345 3.7E-28 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0986 330776a27f29a550c50dffc5bde4fff0 295 Gene3D G3DSA:3.40.50.300 1 285 9.6E-84 T 12-10-2018 Amet_0986 330776a27f29a550c50dffc5bde4fff0 295 Pfam PF02374 Anion-transporting ATPase 3 287 6.4E-88 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Amet_0986 330776a27f29a550c50dffc5bde4fff0 295 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 7 283 4.4E-78 T 12-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Amet_0986 330776a27f29a550c50dffc5bde4fff0 295 SUPERFAMILY SSF52540 4 275 6.17E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4215 82c12a8297ae5f0052dc9a7612c48951 273 PIRSF PIRSF015853 1 273 2.8E-92 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Amet_4215 82c12a8297ae5f0052dc9a7612c48951 273 Gene3D G3DSA:3.40.50.10780 1 215 1.8E-99 T 12-10-2018 IPR027476 D-aminopeptidase, N-terminal Amet_4215 82c12a8297ae5f0052dc9a7612c48951 273 SUPERFAMILY SSF63992 1 269 1.7E-88 T 12-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily Amet_4215 82c12a8297ae5f0052dc9a7612c48951 273 Pfam PF04951 D-aminopeptidase 1 263 5.5E-102 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Amet_4215 82c12a8297ae5f0052dc9a7612c48951 273 Gene3D G3DSA:3.30.1360.130 119 262 1.8E-99 T 12-10-2018 Amet_0565 ebf663e29970eaa38ad93a64b675c605 167 PIRSF PIRSF025624 18 167 1.5E-51 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein Amet_0565 ebf663e29970eaa38ad93a64b675c605 167 Hamap MF_00707 UPF0735 ACT domain-containing protein . 23 167 32.674 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein Amet_0565 ebf663e29970eaa38ad93a64b675c605 167 SUPERFAMILY SSF55021 91 163 1.32E-6 T 12-10-2018 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 SMART SM00363 1 60 2.5E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 SUPERFAMILY SSF55174 2 89 1.13E-15 T 12-10-2018 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 SUPERFAMILY SSF55120 63 228 1.03E-42 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 Pfam PF00849 RNA pseudouridylate synthase 63 193 3.1E-18 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 Gene3D G3DSA:3.30.70.580 64 221 3.4E-54 T 12-10-2018 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 Gene3D G3DSA:3.30.70.1560 123 213 3.4E-54 T 12-10-2018 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 225 1.7E-47 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 Pfam PF01479 S4 domain 2 46 2.1E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2640 438c83f95809c13e68a83b3838e4c2c8 234 Gene3D G3DSA:3.10.290.10 1 58 3.1E-20 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 Gene3D G3DSA:3.40.50.300 442 577 3.3E-11 T 12-10-2018 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 PRINTS PR00315 GTP-binding elongation factor signature 100 110 1.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 PRINTS PR00315 GTP-binding elongation factor signature 153 162 1.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 PRINTS PR00315 GTP-binding elongation factor signature 80 88 1.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 PRINTS PR00315 GTP-binding elongation factor signature 22 35 1.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 PRINTS PR00315 GTP-binding elongation factor signature 116 127 1.1E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 SUPERFAMILY SSF52540 17 247 3.23E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 23 418 3.1E-107 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 Pfam PF01583 Adenylylsulphate kinase 466 547 6.0E-5 T 12-10-2018 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 Pfam PF00009 Elongation factor Tu GTP binding domain 20 203 1.8E-46 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 Gene3D G3DSA:2.40.30.10 231 319 1.3E-19 T 12-10-2018 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 Gene3D G3DSA:2.40.30.10 325 428 1.9E-23 T 12-10-2018 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 Gene3D G3DSA:3.40.50.300 4 230 2.8E-68 T 12-10-2018 Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 73 88 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 SUPERFAMILY SSF50447 232 318 2.87E-14 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 SUPERFAMILY SSF50465 326 427 7.55E-18 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Amet_3492 2329b5e4a4f45606a2b1a5aeb2b79c7e 615 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 204 1.5E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_1400 5cb6da52164a01e1b41a414b463daa6d 180 Gene3D G3DSA:1.20.120.1760 2 171 2.3E-11 T 12-10-2018 Amet_1400 5cb6da52164a01e1b41a414b463daa6d 180 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 171 4.5E-32 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Amet_1400 5cb6da52164a01e1b41a414b463daa6d 180 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amet_1400 5cb6da52164a01e1b41a414b463daa6d 180 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 2.9E-14 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amet_1400 5cb6da52164a01e1b41a414b463daa6d 180 PIRSF PIRSF000847 1 178 5.8E-44 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Amet_0631 bf9afaf44df2b2cec70f1c1935d9d3ac 163 Gene3D G3DSA:3.30.565.10 8 158 9.8E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0631 bf9afaf44df2b2cec70f1c1935d9d3ac 163 Pfam PF14501 GHKL domain 52 159 1.2E-20 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Amet_0631 bf9afaf44df2b2cec70f1c1935d9d3ac 163 SUPERFAMILY SSF55874 26 156 7.99E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 SUPERFAMILY SSF50104 1 107 6.42E-44 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 Gene3D G3DSA:2.30.30.790 3 114 3.8E-14 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 PRINTS PR00061 Ribosomal protein L19 signature 33 62 1.4E-38 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 PRINTS PR00061 Ribosomal protein L19 signature 63 86 1.4E-38 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 PRINTS PR00061 Ribosomal protein L19 signature 3 32 1.4E-38 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 PIRSF PIRSF002191 1 117 6.3E-47 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 114 31.241 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 113 4.9E-48 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2742 96f140988d414bb273b7f77fab7dc83a 117 Pfam PF01245 Ribosomal protein L19 3 113 2.0E-48 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3631 077eaaf6db326382073750d9d8964c5f 347 SUPERFAMILY SSF111369 50 266 1.83E-12 T 12-10-2018 Amet_3631 077eaaf6db326382073750d9d8964c5f 347 Gene3D G3DSA:2.40.50.100 60 190 1.3E-44 T 12-10-2018 Amet_3631 077eaaf6db326382073750d9d8964c5f 347 Gene3D G3DSA:2.40.30.170 48 267 1.3E-44 T 12-10-2018 Amet_3631 077eaaf6db326382073750d9d8964c5f 347 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 258 4.8E-12 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Amet_3631 077eaaf6db326382073750d9d8964c5f 347 Gene3D G3DSA:1.10.287.470 95 155 1.3E-44 T 12-10-2018 Amet_3631 077eaaf6db326382073750d9d8964c5f 347 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 341 4.1E-43 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Amet_3631 077eaaf6db326382073750d9d8964c5f 347 Gene3D G3DSA:2.40.420.20 36 326 1.3E-44 T 12-10-2018 Amet_1583 b99f798a6c5689a6166d2256af0e5244 194 SUPERFAMILY SSF141571 16 193 2.75E-39 T 12-10-2018 Amet_1583 b99f798a6c5689a6166d2256af0e5244 194 Pfam PF13599 Pentapeptide repeats (9 copies) 94 157 2.7E-8 T 12-10-2018 IPR001646 Pentapeptide repeat Amet_1583 b99f798a6c5689a6166d2256af0e5244 194 Pfam PF13599 Pentapeptide repeats (9 copies) 29 88 4.2E-13 T 12-10-2018 IPR001646 Pentapeptide repeat Amet_1583 b99f798a6c5689a6166d2256af0e5244 194 Gene3D G3DSA:2.160.20.80 3 194 1.2E-39 T 12-10-2018 Amet_0534 0ff2c74420b4dabf3732123f479c9809 88 Pfam PF03795 YCII-related domain 14 75 1.7E-9 T 12-10-2018 IPR005545 YCII-related Amet_0534 0ff2c74420b4dabf3732123f479c9809 88 Gene3D G3DSA:3.30.70.1060 9 86 7.8E-6 T 12-10-2018 Amet_0534 0ff2c74420b4dabf3732123f479c9809 88 SUPERFAMILY SSF54909 1 84 2.15E-15 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 9.6E-65 T 12-10-2018 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00145 Argininosuccinate lyase family signature 310 329 9.6E-65 T 12-10-2018 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 9.6E-65 T 12-10-2018 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00145 Argininosuccinate lyase family signature 193 209 9.6E-65 T 12-10-2018 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 9.6E-65 T 12-10-2018 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00145 Argininosuccinate lyase family signature 275 291 9.6E-65 T 12-10-2018 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 Pfam PF00206 Lyase 6 300 1.6E-83 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 Gene3D G3DSA:1.20.200.10 119 445 1.4E-197 T 12-10-2018 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 Gene3D G3DSA:1.10.40.30 360 432 1.4E-197 T 12-10-2018 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 Pfam PF14698 Argininosuccinate lyase C-terminal 363 431 4.2E-26 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 ProSitePatterns PS00163 Fumarate lyases signature. 275 284 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 SUPERFAMILY SSF48557 3 452 1.01E-149 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00149 Fumarate lyase superfamily signature 275 291 6.3E-28 T 12-10-2018 IPR000362 Fumarate lyase family Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 6.3E-28 T 12-10-2018 IPR000362 Fumarate lyase family Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 6.3E-28 T 12-10-2018 IPR000362 Fumarate lyase family Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 6.3E-28 T 12-10-2018 IPR000362 Fumarate lyase family Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 453 2.0E-196 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 453 43.29 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_0652 b9d03d38b867fb45e2e868c878b16fd7 460 Gene3D G3DSA:1.10.275.10 25 229 1.4E-197 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal Amet_0687 e0e8750c927df60ab4519548319c9c43 525 SUPERFAMILY SSF52210 181 317 3.79E-20 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0687 e0e8750c927df60ab4519548319c9c43 525 Pfam PF02629 CoA binding domain 188 282 4.9E-15 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Amet_0687 e0e8750c927df60ab4519548319c9c43 525 Gene3D G3DSA:3.40.50.261 347 517 1.4E-135 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0687 e0e8750c927df60ab4519548319c9c43 525 Pfam PF00549 CoA-ligase 351 511 2.4E-52 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0687 e0e8750c927df60ab4519548319c9c43 525 SUPERFAMILY SSF52210 354 516 1.09E-9 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0687 e0e8750c927df60ab4519548319c9c43 525 Gene3D G3DSA:3.40.50.720 104 186 1.4E-135 T 12-10-2018 Amet_0687 e0e8750c927df60ab4519548319c9c43 525 Gene3D G3DSA:3.40.50.261 188 346 1.4E-135 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_4219 1bc6c917409e49d97609ef2c9ebca675 409 SMART SM00422 1 68 0.0019 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_4219 1bc6c917409e49d97609ef2c9ebca675 409 Pfam PF13649 Methyltransferase domain 232 331 2.7E-7 T 12-10-2018 Amet_4219 1bc6c917409e49d97609ef2c9ebca675 409 Pfam PF13411 MerR HTH family regulatory protein 1 66 2.0E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_4219 1bc6c917409e49d97609ef2c9ebca675 409 Gene3D G3DSA:1.10.1660.10 1 127 2.3E-16 T 12-10-2018 Amet_4219 1bc6c917409e49d97609ef2c9ebca675 409 SUPERFAMILY SSF53335 214 381 9.97E-19 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_4219 1bc6c917409e49d97609ef2c9ebca675 409 SUPERFAMILY SSF46955 1 107 1.65E-13 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_4219 1bc6c917409e49d97609ef2c9ebca675 409 Gene3D G3DSA:3.40.50.150 204 386 5.6E-17 T 12-10-2018 Amet_0247 aa5780f01c7474c5a9ac9d6b6a3eb6f5 152 Pfam PF13690 Chemotaxis phosphatase CheX 43 138 1.4E-14 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Amet_0247 aa5780f01c7474c5a9ac9d6b6a3eb6f5 152 Gene3D G3DSA:3.40.1550.10 1 152 4.4E-40 T 12-10-2018 IPR028976 CheC-like superfamily Amet_0247 aa5780f01c7474c5a9ac9d6b6a3eb6f5 152 SUPERFAMILY SSF103039 1 135 9.16E-26 T 12-10-2018 IPR028976 CheC-like superfamily Amet_0117 cc4fc7c6027ee55484f26941e29c6906 533 Pfam PF13005 zinc-finger binding domain of transposase IS66 120 164 3.0E-13 T 12-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 Amet_0117 cc4fc7c6027ee55484f26941e29c6906 533 Pfam PF13817 IS66 C-terminal element 477 517 2.9E-13 T 12-10-2018 IPR039552 Transposase IS66, C-terminal Amet_0117 cc4fc7c6027ee55484f26941e29c6906 533 Pfam PF03050 Transposase IS66 family 187 470 6.4E-98 T 12-10-2018 IPR004291 Transposase, IS66 Amet_0117 cc4fc7c6027ee55484f26941e29c6906 533 Pfam PF13007 Transposase C of IS166 homeodomain 44 112 1.4E-7 T 12-10-2018 IPR024463 Transposase TnpC, homeodomain Amet_2212 a136cc4bc3a79771b6cb5244472a28dd 111 Pfam PF01740 STAS domain 6 100 7.7E-21 T 12-10-2018 IPR002645 STAS domain Amet_2212 a136cc4bc3a79771b6cb5244472a28dd 111 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 103 3.4E-29 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amet_2212 a136cc4bc3a79771b6cb5244472a28dd 111 Gene3D G3DSA:3.30.750.24 4 111 1.9E-30 T 12-10-2018 IPR036513 STAS domain superfamily Amet_2212 a136cc4bc3a79771b6cb5244472a28dd 111 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 4 108 4.9E-40 T 12-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 Amet_2212 a136cc4bc3a79771b6cb5244472a28dd 111 SUPERFAMILY SSF52091 3 109 3.79E-28 T 12-10-2018 IPR036513 STAS domain superfamily Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 Gene3D G3DSA:1.20.1640.10 515 1021 0.0 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 SUPERFAMILY SSF82693 40 134 2.88E-26 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 Gene3D G3DSA:3.30.70.1440 671 864 0.0 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 Gene3D G3DSA:3.30.70.1320 132 323 0.0 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 Gene3D G3DSA:3.30.2090.10 177 267 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 Gene3D G3DSA:1.20.1640.10 10 514 0.0 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 Pfam PF00873 AcrB/AcrD/AcrF family 4 1024 3.1E-270 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 SUPERFAMILY SSF82714 720 805 9.29E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 Gene3D G3DSA:3.30.70.1430 40 815 0.0 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 Gene3D G3DSA:3.30.70.1430 569 670 0.0 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 SUPERFAMILY SSF82866 803 1026 4.84E-52 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 SUPERFAMILY SSF82866 288 487 5.36E-46 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 SUPERFAMILY SSF82714 182 262 8.11E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 SUPERFAMILY SSF82693 136 311 5.49E-17 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 SUPERFAMILY SSF82693 568 666 1.36E-13 T 12-10-2018 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.4E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 1.4E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.4E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 1.4E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 1.4E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 1.4E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 1.4E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 1.4E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 PRINTS PR00702 Acriflavin resistance protein family signature 627 641 1.4E-58 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_0188 728ba604855088bf07f8ad6bb1a1d0c1 1049 Gene3D G3DSA:3.30.2090.10 719 807 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 SMART SM00881 4 100 5.3E-29 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 Gene3D G3DSA:3.40.50.720 1 123 3.3E-49 T 12-10-2018 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.429 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 7.8E-39 T 12-10-2018 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 7.8E-39 T 12-10-2018 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 7.8E-39 T 12-10-2018 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 7.8E-39 T 12-10-2018 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 PIRSF PIRSF001553 1 291 8.2E-128 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 SUPERFAMILY SSF52210 123 288 2.62E-52 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 Pfam PF02629 CoA binding domain 6 99 3.6E-28 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 Gene3D G3DSA:3.40.50.261 124 289 5.9E-69 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 Pfam PF00549 CoA-ligase 151 268 4.7E-18 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 2.8E-141 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 SUPERFAMILY SSF51735 1 122 1.88E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Amet_0485 28511bfefb9c0b52e0acd57f7e59754a 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 SUPERFAMILY SSF55174 2 207 1.96E-68 T 12-10-2018 Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 2.8E-74 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.128 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 Pfam PF01479 S4 domain 99 145 2.5E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 Gene3D G3DSA:1.10.1050.10 6 207 3.1E-87 T 12-10-2018 Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 SMART SM00363 98 163 4.7E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 SMART SM01390 3 97 4.8E-54 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 Gene3D G3DSA:3.10.290.10 97 192 3.1E-87 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 1.3E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Amet_4450 253c4d46d6e4b6d3d98c9f8411b8bac5 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4260 e203171447590dc67d171a2047fc73d3 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 217 1.6E-63 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Amet_4260 e203171447590dc67d171a2047fc73d3 219 Pfam PF03006 Haemolysin-III related 12 211 9.2E-41 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Amet_0045 00cdf19b84252be92ae35c067fc49ee8 71 Gene3D G3DSA:3.30.70.100 1 71 1.1E-20 T 12-10-2018 Amet_0045 00cdf19b84252be92ae35c067fc49ee8 71 Pfam PF00403 Heavy-metal-associated domain 5 64 1.2E-17 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amet_0045 00cdf19b84252be92ae35c067fc49ee8 71 SUPERFAMILY SSF55008 1 68 2.23E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_0045 00cdf19b84252be92ae35c067fc49ee8 71 PRINTS PR00944 Copper ion binding protein signature 27 40 1.5E-7 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amet_0045 00cdf19b84252be92ae35c067fc49ee8 71 PRINTS PR00944 Copper ion binding protein signature 14 27 1.5E-7 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amet_0045 00cdf19b84252be92ae35c067fc49ee8 71 PRINTS PR00944 Copper ion binding protein signature 52 65 1.5E-7 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amet_0045 00cdf19b84252be92ae35c067fc49ee8 71 PRINTS PR00944 Copper ion binding protein signature 2 14 1.5E-7 T 12-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Amet_0045 00cdf19b84252be92ae35c067fc49ee8 71 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Amet_3442 8565ff437d32071c2ff8aa9e2bf5010b 315 Gene3D G3DSA:3.40.50.720 6 296 1.2E-83 T 12-10-2018 Amet_3442 8565ff437d32071c2ff8aa9e2bf5010b 315 SUPERFAMILY SSF51735 4 312 1.85E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3442 8565ff437d32071c2ff8aa9e2bf5010b 315 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 240 1.3E-47 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amet_3442 8565ff437d32071c2ff8aa9e2bf5010b 315 Gene3D G3DSA:3.90.25.10 171 308 1.2E-83 T 12-10-2018 Amet_1489 5302091f01286af82eb82d076f283075 375 Pfam PF07833 Copper amine oxidase N-terminal domain 149 248 3.9E-24 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_1489 5302091f01286af82eb82d076f283075 375 SUPERFAMILY SSF55383 152 243 1.7E-17 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_1489 5302091f01286af82eb82d076f283075 375 SUPERFAMILY SSF55383 102 172 1.24E-9 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_1489 5302091f01286af82eb82d076f283075 375 Pfam PF14343 PrcB C-terminal 302 358 2.0E-14 T 12-10-2018 IPR025748 PrcB C-terminal domain Amet_1489 5302091f01286af82eb82d076f283075 375 Gene3D G3DSA:3.30.457.10 154 239 1.6E-14 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_0230 af3c993b0a13a73255b5643e2b8f538f 361 Pfam PF16868 NMT1-like family 158 358 4.7E-25 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amet_0230 af3c993b0a13a73255b5643e2b8f538f 361 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 358 1.7E-29 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amet_0230 af3c993b0a13a73255b5643e2b8f538f 361 Gene3D G3DSA:3.40.190.10 59 358 6.9E-43 T 12-10-2018 Amet_0230 af3c993b0a13a73255b5643e2b8f538f 361 Gene3D G3DSA:3.40.190.10 143 293 6.9E-43 T 12-10-2018 Amet_0230 af3c993b0a13a73255b5643e2b8f538f 361 SUPERFAMILY SSF53850 55 360 1.41E-27 T 12-10-2018 Amet_4065 85e2de3505d2f4429164a8efdac76678 78 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 3 71 6.3E-8 T 12-10-2018 Amet_4065 85e2de3505d2f4429164a8efdac76678 78 Gene3D G3DSA:3.40.30.10 1 76 3.6E-13 T 12-10-2018 Amet_4065 85e2de3505d2f4429164a8efdac76678 78 SUPERFAMILY SSF52833 3 73 1.79E-10 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_3073 0833f94ff4900b2289928bafe9f9c0d7 529 Gene3D G3DSA:3.30.70.330 453 527 8.8E-24 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Amet_3073 0833f94ff4900b2289928bafe9f9c0d7 529 SMART SM00490 257 338 4.5E-34 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_3073 0833f94ff4900b2289928bafe9f9c0d7 529 Pfam PF00271 Helicase conserved C-terminal domain 229 338 7.9E-31 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_3073 0833f94ff4900b2289928bafe9f9c0d7 529 Pfam PF03880 DbpA RNA binding domain 453 524 1.1E-26 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Amet_3073 0833f94ff4900b2289928bafe9f9c0d7 529 Gene3D G3DSA:3.40.50.300 1 208 2.9E-75 T 12-10-2018 Amet_3073 0833f94ff4900b2289928bafe9f9c0d7 529 SUPERFAMILY SSF52540 73 358 4.66E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3073 0833f94ff4900b2289928bafe9f9c0d7 529 Gene3D G3DSA:3.40.50.300 209 452 2.9E-53 T 12-10-2018 Amet_3073 0833f94ff4900b2289928bafe9f9c0d7 529 SMART SM00487 23 221 1.3E-59 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_3073 0833f94ff4900b2289928bafe9f9c0d7 529 Pfam PF00270 DEAD/DEAH box helicase 28 194 2.0E-49 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amet_1423 20d577784a6115b10ea9456f28790f63 182 Pfam PF13302 Acetyltransferase (GNAT) domain 33 150 1.1E-22 T 12-10-2018 IPR000182 GNAT domain Amet_1423 20d577784a6115b10ea9456f28790f63 182 Gene3D G3DSA:3.40.630.30 3 176 2.3E-44 T 12-10-2018 Amet_1423 20d577784a6115b10ea9456f28790f63 182 SUPERFAMILY SSF55729 4 174 1.15E-39 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_0243 3a32b5038e98a20fdb075f7339229b10 162 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 3 151 1.7E-28 T 12-10-2018 IPR012912 Plasmid pRiA4b, Orf3 Amet_0243 3a32b5038e98a20fdb075f7339229b10 162 Gene3D G3DSA:3.10.290.30 1 160 7.2E-28 T 12-10-2018 IPR024047 MM3350-like superfamily Amet_0243 3a32b5038e98a20fdb075f7339229b10 162 SUPERFAMILY SSF159941 1 152 3.27E-28 T 12-10-2018 IPR024047 MM3350-like superfamily Amet_4102 125421e95979758f1109254a79a9eea4 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 17 158 4.2E-43 T 12-10-2018 Amet_4102 125421e95979758f1109254a79a9eea4 159 SUPERFAMILY SSF52833 6 158 2.01E-46 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_4102 125421e95979758f1109254a79a9eea4 159 PIRSF PIRSF000216 1 159 1.3E-46 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4102 125421e95979758f1109254a79a9eea4 159 Gene3D G3DSA:3.40.30.10 75 157 1.6E-23 T 12-10-2018 Amet_4102 125421e95979758f1109254a79a9eea4 159 Gene3D G3DSA:1.10.10.1590 2 74 8.6E-13 T 12-10-2018 Amet_4203 1281f0d317ea611fd3248919824ebc84 368 SUPERFAMILY SSF55874 246 351 6.98E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4203 1281f0d317ea611fd3248919824ebc84 368 Gene3D G3DSA:3.30.565.10 232 352 4.7E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4203 1281f0d317ea611fd3248919824ebc84 368 Pfam PF07730 Histidine kinase 167 233 5.0E-16 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amet_4138 4ca6a265c3b144e26fd3f3204b1fa48e 288 Gene3D G3DSA:3.30.70.120 196 273 1.1E-28 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amet_4138 4ca6a265c3b144e26fd3f3204b1fa48e 288 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 226 280 3.7E-23 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 Amet_4138 4ca6a265c3b144e26fd3f3204b1fa48e 288 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 221 5.4E-66 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT Amet_4138 4ca6a265c3b144e26fd3f3204b1fa48e 288 PIRSF PIRSF006483 1 288 3.9E-93 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT Amet_3409 8006fd92b39ea43b23ac4c9633652ce9 513 PIRSF PIRSF009451 1 513 9.7E-231 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Amet_3409 8006fd92b39ea43b23ac4c9633652ce9 513 SUPERFAMILY SSF100950 246 511 2.19E-60 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_3409 8006fd92b39ea43b23ac4c9633652ce9 513 SUPERFAMILY SSF100950 3 243 7.54E-74 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_3409 8006fd92b39ea43b23ac4c9633652ce9 513 Gene3D G3DSA:3.40.1080.10 1 247 2.3E-101 T 12-10-2018 Amet_3409 8006fd92b39ea43b23ac4c9633652ce9 513 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 32 513 8.9E-203 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Amet_3409 8006fd92b39ea43b23ac4c9633652ce9 513 Gene3D G3DSA:3.40.1080.10 248 513 3.3E-123 T 12-10-2018 Amet_3409 8006fd92b39ea43b23ac4c9633652ce9 513 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 47 510 1.8E-192 T 12-10-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 Amet_0349 40564840e7dea12dfb7b95fad5d16d10 168 Hamap MF_01398 ATP synthase subunit b [atpF]. 3 143 13.104 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Amet_0349 40564840e7dea12dfb7b95fad5d16d10 168 Pfam PF00430 ATP synthase B/B' CF(0) 12 142 1.4E-29 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Amet_0349 40564840e7dea12dfb7b95fad5d16d10 168 SUPERFAMILY SSF81573 70 126 4.71E-7 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Amet_0349 40564840e7dea12dfb7b95fad5d16d10 168 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 16 161 2.6E-34 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Amet_4571 e2bd25c2d90863898fa007e803204092 288 SUPERFAMILY SSF56176 4 170 3.21E-48 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_4571 e2bd25c2d90863898fa007e803204092 288 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 181 281 3.3E-11 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Amet_4571 e2bd25c2d90863898fa007e803204092 288 SUPERFAMILY SSF55447 183 284 1.31E-11 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Amet_4571 e2bd25c2d90863898fa007e803204092 288 Gene3D G3DSA:3.30.390.50 177 288 1.5E-31 T 12-10-2018 Amet_4571 e2bd25c2d90863898fa007e803204092 288 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 169 1.5E-47 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Amet_4571 e2bd25c2d90863898fa007e803204092 288 Gene3D G3DSA:3.30.465.10 1 174 1.6E-56 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_4571 e2bd25c2d90863898fa007e803204092 288 SMART SM01092 179 282 2.8E-11 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Amet_0954 4724d5d2a2552df6dd4a4688d754df70 173 Hamap MF_01515 UPF0316 protein . 4 172 28.478 T 12-10-2018 IPR022930 Protein of unknown function UPF0316 Amet_0954 4724d5d2a2552df6dd4a4688d754df70 173 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 112 164 2.6E-10 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 Gene3D G3DSA:3.40.50.1980 31 232 9.6E-133 T 12-10-2018 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 PIRSF PIRSF000099 2 431 8.2E-181 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 Gene3D G3DSA:3.40.50.1980 234 350 9.6E-133 T 12-10-2018 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 Pfam PF00815 Histidinol dehydrogenase 21 428 5.8E-180 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 SUPERFAMILY SSF53720 27 428 1.31E-82 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 428 43.404 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 3.2E-94 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 3.2E-94 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 PRINTS PR00083 Histidinol dehydrogenase signature 136 162 3.2E-94 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 3.2E-94 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 3.2E-94 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.2E-94 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 3.2E-94 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 3.2E-94 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Amet_0572 e1408c5a1eda1b9e6e8441979e65afc1 433 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 5.6E-172 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Amet_1515 648657c111995bee513d52de1905447d 569 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1515 648657c111995bee513d52de1905447d 569 Gene3D G3DSA:3.40.50.300 318 568 9.4E-69 T 12-10-2018 Amet_1515 648657c111995bee513d52de1905447d 569 Gene3D G3DSA:3.40.50.300 5 317 3.1E-87 T 12-10-2018 Amet_1515 648657c111995bee513d52de1905447d 569 SUPERFAMILY SSF52540 7 253 1.12E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1515 648657c111995bee513d52de1905447d 569 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 313 1.2E-13 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_1515 648657c111995bee513d52de1905447d 569 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1515 648657c111995bee513d52de1905447d 569 Pfam PF00005 ABC transporter 342 490 1.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1515 648657c111995bee513d52de1905447d 569 Pfam PF00005 ABC transporter 27 182 1.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1515 648657c111995bee513d52de1905447d 569 SMART SM00382 350 541 7.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1515 648657c111995bee513d52de1905447d 569 SMART SM00382 36 234 5.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1515 648657c111995bee513d52de1905447d 569 SUPERFAMILY SSF52540 321 562 4.26E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1515 648657c111995bee513d52de1905447d 569 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 295 7.1E-11 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_0227 adc6ec6f4a9306a1c7fccca7cf3c5117 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 378 4.9E-108 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Amet_0227 adc6ec6f4a9306a1c7fccca7cf3c5117 386 Gene3D G3DSA:3.40.50.1970 1 186 1.4E-43 T 12-10-2018 Amet_0227 adc6ec6f4a9306a1c7fccca7cf3c5117 386 Gene3D G3DSA:1.20.1090.10 187 384 2.8E-67 T 12-10-2018 Amet_0227 adc6ec6f4a9306a1c7fccca7cf3c5117 386 SUPERFAMILY SSF56796 4 384 5.1E-110 T 12-10-2018 Amet_0227 adc6ec6f4a9306a1c7fccca7cf3c5117 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 175 203 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Amet_0415 1350ebb23c2581d5d1c73450d01e8aaa 485 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 343 467 9.5E-21 T 12-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit Amet_0415 1350ebb23c2581d5d1c73450d01e8aaa 485 Gene3D G3DSA:3.40.50.300 2 214 1.6E-5 T 12-10-2018 Amet_4366 1350ebb23c2581d5d1c73450d01e8aaa 485 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 343 467 9.5E-21 T 12-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit Amet_4366 1350ebb23c2581d5d1c73450d01e8aaa 485 Gene3D G3DSA:3.40.50.300 2 214 1.6E-5 T 12-10-2018 Amet_1952 1350ebb23c2581d5d1c73450d01e8aaa 485 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 343 467 9.5E-21 T 12-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit Amet_1952 1350ebb23c2581d5d1c73450d01e8aaa 485 Gene3D G3DSA:3.40.50.300 2 214 1.6E-5 T 12-10-2018 Amet_1502 c1653549c4288509389fdc518aedf786 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 1.1E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1502 c1653549c4288509389fdc518aedf786 211 Gene3D G3DSA:1.10.10.60 9 56 2.4E-20 T 12-10-2018 Amet_1502 c1653549c4288509389fdc518aedf786 211 SUPERFAMILY SSF46689 13 79 8.72E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1502 c1653549c4288509389fdc518aedf786 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 4.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1502 c1653549c4288509389fdc518aedf786 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 4.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1502 c1653549c4288509389fdc518aedf786 211 SUPERFAMILY SSF48498 86 209 8.89E-31 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_1502 c1653549c4288509389fdc518aedf786 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amet_1502 c1653549c4288509389fdc518aedf786 211 Gene3D G3DSA:1.10.357.10 58 209 1.5E-28 T 12-10-2018 Amet_1000 99e0552f25a837d3e502f7056af2fbb7 261 PIRSF PIRSF015626 2 261 6.2E-85 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Amet_1000 99e0552f25a837d3e502f7056af2fbb7 261 Pfam PF02634 FdhD/NarQ family 25 258 6.9E-80 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Amet_1000 99e0552f25a837d3e502f7056af2fbb7 261 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 1 259 32.479 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Amet_1000 99e0552f25a837d3e502f7056af2fbb7 261 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 20 258 8.5E-69 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Amet_1000 99e0552f25a837d3e502f7056af2fbb7 261 SUPERFAMILY SSF53927 3 258 3.31E-78 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amet_1000 99e0552f25a837d3e502f7056af2fbb7 261 Gene3D G3DSA:3.10.20.10 27 109 4.7E-17 T 12-10-2018 Amet_1000 99e0552f25a837d3e502f7056af2fbb7 261 Gene3D G3DSA:3.40.140.10 115 260 1.4E-51 T 12-10-2018 Amet_4047 cfe84379d2405f4b421ceaf0c3f7a5c0 169 Gene3D G3DSA:3.90.75.20 37 148 4.7E-7 T 12-10-2018 Amet_4047 cfe84379d2405f4b421ceaf0c3f7a5c0 169 Pfam PF13392 HNH endonuclease 97 139 2.4E-15 T 12-10-2018 IPR003615 HNH nuclease Amet_4047 cfe84379d2405f4b421ceaf0c3f7a5c0 169 SUPERFAMILY SSF54060 93 144 2.18E-9 T 12-10-2018 Amet_2892 b882053dcf4364f7d6da8cf0f25a0aef 420 SUPERFAMILY SSF63411 8 226 3.49E-19 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_2892 b882053dcf4364f7d6da8cf0f25a0aef 420 Gene3D G3DSA:3.30.830.10 239 420 4.2E-39 T 12-10-2018 Amet_2892 b882053dcf4364f7d6da8cf0f25a0aef 420 SUPERFAMILY SSF63411 250 411 2.0E-25 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_2892 b882053dcf4364f7d6da8cf0f25a0aef 420 Gene3D G3DSA:3.30.830.10 4 230 1.1E-60 T 12-10-2018 Amet_2892 b882053dcf4364f7d6da8cf0f25a0aef 420 Pfam PF05193 Peptidase M16 inactive domain 183 355 1.5E-20 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Amet_3014 fbcd16dfc1d8e63663bfac903e3245f0 142 PIRSF PIRSF038996 1 138 9.2E-41 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Amet_3014 fbcd16dfc1d8e63663bfac903e3245f0 142 SUPERFAMILY SSF52218 1 140 2.23E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_3014 fbcd16dfc1d8e63663bfac903e3245f0 142 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Amet_3014 fbcd16dfc1d8e63663bfac903e3245f0 142 Gene3D G3DSA:3.40.50.360 2 141 8.0E-33 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_3014 fbcd16dfc1d8e63663bfac903e3245f0 142 PRINTS PR00369 Flavodoxin signature 51 62 3.4E-6 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Amet_3014 fbcd16dfc1d8e63663bfac903e3245f0 142 PRINTS PR00369 Flavodoxin signature 80 90 3.4E-6 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Amet_3014 fbcd16dfc1d8e63663bfac903e3245f0 142 PRINTS PR00369 Flavodoxin signature 5 18 3.4E-6 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Amet_3014 fbcd16dfc1d8e63663bfac903e3245f0 142 Pfam PF00258 Flavodoxin 6 127 4.3E-24 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Amet_3014 fbcd16dfc1d8e63663bfac903e3245f0 142 TIGRFAM TIGR01753 flav_short: flavodoxin 4 142 1.7E-37 T 12-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 Amet_3372 1a43775c5bc186c6235048384eea67fb 644 SMART SM00382 337 512 7.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3372 1a43775c5bc186c6235048384eea67fb 644 SMART SM00382 28 226 1.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3372 1a43775c5bc186c6235048384eea67fb 644 Gene3D G3DSA:3.40.50.300 2 275 7.8E-69 T 12-10-2018 Amet_3372 1a43775c5bc186c6235048384eea67fb 644 Pfam PF12848 ABC transporter 220 291 2.2E-11 T 12-10-2018 IPR032781 ABC-transporter extension domain Amet_3372 1a43775c5bc186c6235048384eea67fb 644 SUPERFAMILY SSF52540 4 234 2.13E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3372 1a43775c5bc186c6235048384eea67fb 644 SUPERFAMILY SSF52540 307 522 2.78E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3372 1a43775c5bc186c6235048384eea67fb 644 Gene3D G3DSA:1.10.287.380 557 635 3.9E-8 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Amet_3372 1a43775c5bc186c6235048384eea67fb 644 Pfam PF00005 ABC transporter 19 181 2.5E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3372 1a43775c5bc186c6235048384eea67fb 644 Pfam PF16326 ABC transporter C-terminal domain 566 631 5.9E-14 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Amet_3372 1a43775c5bc186c6235048384eea67fb 644 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3372 1a43775c5bc186c6235048384eea67fb 644 Pfam PF00005 ABC transporter 332 463 7.0E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3372 1a43775c5bc186c6235048384eea67fb 644 Gene3D G3DSA:3.40.50.300 278 537 2.1E-60 T 12-10-2018 Amet_1732 0e63adcd03ce920dc3256dcbdad698a2 480 Gene3D G3DSA:3.90.780.10 310 480 1.1E-22 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_1732 0e63adcd03ce920dc3256dcbdad698a2 480 PRINTS PR01607 Apyrase family signature 189 206 1.3E-8 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_1732 0e63adcd03ce920dc3256dcbdad698a2 480 PRINTS PR01607 Apyrase family signature 246 266 1.3E-8 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_1732 0e63adcd03ce920dc3256dcbdad698a2 480 PRINTS PR01607 Apyrase family signature 358 381 1.3E-8 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_1732 0e63adcd03ce920dc3256dcbdad698a2 480 PRINTS PR01607 Apyrase family signature 7 25 1.3E-8 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_1732 0e63adcd03ce920dc3256dcbdad698a2 480 SUPERFAMILY SSF56300 9 304 6.08E-51 T 12-10-2018 Amet_1732 0e63adcd03ce920dc3256dcbdad698a2 480 Gene3D G3DSA:3.60.21.10 2 309 9.9E-51 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_1732 0e63adcd03ce920dc3256dcbdad698a2 480 Pfam PF02872 5'-nucleotidase, C-terminal domain 321 445 4.7E-16 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_1732 0e63adcd03ce920dc3256dcbdad698a2 480 SUPERFAMILY SSF55816 321 479 4.19E-28 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 Pfam PF01165 Ribosomal protein S21 4 57 1.1E-23 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 4.3E-22 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 7.0E-8 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.692 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.7E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.7E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.7E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.7E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3042 bfbfae8af1fd12b550070e51758f60af 57 Gene3D G3DSA:1.20.5.1150 16 54 5.3E-20 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0171 70ff82843269753feffb847fca0a17a2 100 Pfam PF04977 Septum formation initiator 16 94 1.3E-10 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Amet_4011 7ef3e95387cdb0a553b340224e1c435e 183 Gene3D G3DSA:2.40.50.140 1 180 2.8E-75 T 12-10-2018 Amet_4011 7ef3e95387cdb0a553b340224e1c435e 183 SUPERFAMILY SSF50249 6 179 2.57E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_4011 7ef3e95387cdb0a553b340224e1c435e 183 Pfam PF10991 Protein of unknown function (DUF2815) 9 177 5.8E-72 T 12-10-2018 IPR022595 Protein of unknown function DUF2815 Amet_4271 03e190d15a6535889b64d24f28952f50 464 SUPERFAMILY SSF52794 377 462 1.44E-24 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Amet_4271 03e190d15a6535889b64d24f28952f50 464 Gene3D G3DSA:3.40.50.2300 368 464 1.3E-35 T 12-10-2018 Amet_4271 03e190d15a6535889b64d24f28952f50 464 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 378 461 1.9E-12 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Amet_4271 03e190d15a6535889b64d24f28952f50 464 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 20 352 6.4E-165 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 Amet_4271 03e190d15a6535889b64d24f28952f50 464 Pfam PF02378 Phosphotransferase system, EIIC 29 287 2.0E-20 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Amet_2292 06ee5b0e800e8d95dc8ad80173370851 165 PIRSF PIRSF037497 1 165 5.4E-60 T 12-10-2018 IPR017225 Cell shape-determining protein MreD, predicted Amet_2292 06ee5b0e800e8d95dc8ad80173370851 165 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 2 151 5.7E-22 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Amet_2292 06ee5b0e800e8d95dc8ad80173370851 165 Pfam PF04093 rod shape-determining protein MreD 5 157 4.3E-15 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Amet_2160 fe325443c66585f5db2d67660083057c 188 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 112 122 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Amet_2160 fe325443c66585f5db2d67660083057c 188 Pfam PF01227 GTP cyclohydrolase I 6 184 1.0E-79 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Amet_2160 fe325443c66585f5db2d67660083057c 188 SUPERFAMILY SSF55620 2 185 2.74E-80 T 12-10-2018 Amet_2160 fe325443c66585f5db2d67660083057c 188 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 2 185 42.775 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Amet_2160 fe325443c66585f5db2d67660083057c 188 Gene3D G3DSA:1.10.286.10 1 51 1.7E-22 T 12-10-2018 Amet_2160 fe325443c66585f5db2d67660083057c 188 Gene3D G3DSA:3.30.1130.10 53 186 7.5E-61 T 12-10-2018 Amet_2160 fe325443c66585f5db2d67660083057c 188 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 185 1.6E-78 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Amet_2160 fe325443c66585f5db2d67660083057c 188 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 63 79 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Amet_4580 db7e46b2e193d08bcc40f5305c95566b 92 SMART SM00877 3 79 3.4E-30 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_4580 db7e46b2e193d08bcc40f5305c95566b 92 Gene3D G3DSA:3.30.70.1710 1 91 1.4E-32 T 12-10-2018 Amet_4580 db7e46b2e193d08bcc40f5305c95566b 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 49 4.0E-13 T 12-10-2018 Amet_4580 db7e46b2e193d08bcc40f5305c95566b 92 Pfam PF00936 BMC domain 4 79 1.2E-23 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_4580 db7e46b2e193d08bcc40f5305c95566b 92 SUPERFAMILY SSF143414 3 87 3.4E-28 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_0528 e9c58f9aeb23d3752a3862239021d8cf 275 Gene3D G3DSA:3.40.1390.30 130 246 8.7E-7 T 12-10-2018 Amet_0528 e9c58f9aeb23d3752a3862239021d8cf 275 SUPERFAMILY SSF102705 21 268 5.69E-13 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Amet_0528 e9c58f9aeb23d3752a3862239021d8cf 275 Gene3D G3DSA:3.40.1390.30 123 261 8.7E-7 T 12-10-2018 Amet_0528 e9c58f9aeb23d3752a3862239021d8cf 275 Gene3D G3DSA:3.40.1390.30 2 102 1.1E-7 T 12-10-2018 Amet_0528 e9c58f9aeb23d3752a3862239021d8cf 275 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 22 261 8.5E-10 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 328 35.68 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 SMART SM00859 4 120 2.8E-40 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 Gene3D G3DSA:3.30.360.10 127 311 1.8E-134 T 12-10-2018 Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 118 1.1E-27 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 Gene3D G3DSA:3.40.50.720 5 325 1.8E-134 T 12-10-2018 Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 327 6.5E-132 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 SUPERFAMILY SSF55347 128 315 1.94E-74 T 12-10-2018 Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 314 1.5E-55 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 SUPERFAMILY SSF51735 3 156 6.11E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3198 258a8d521e4d4c5e4808a533b16f9abe 331 PIRSF PIRSF000148 2 331 7.5E-126 T 12-10-2018 Amet_0118 fdd665b114df11811ab7fb91dd782ce5 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_0118 fdd665b114df11811ab7fb91dd782ce5 624 Pfam PF01609 Transposase DDE domain 262 549 9.5E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_2775 fdd665b114df11811ab7fb91dd782ce5 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2775 fdd665b114df11811ab7fb91dd782ce5 624 Pfam PF01609 Transposase DDE domain 262 549 9.5E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_3087 09e30ffb7da72c3eeeacb9365567b8b5 236 SUPERFAMILY SSF46894 136 235 1.19E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_3087 09e30ffb7da72c3eeeacb9365567b8b5 236 Gene3D G3DSA:3.40.50.2300 1 136 8.3E-39 T 12-10-2018 Amet_3087 09e30ffb7da72c3eeeacb9365567b8b5 236 Pfam PF00072 Response regulator receiver domain 7 117 8.8E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3087 09e30ffb7da72c3eeeacb9365567b8b5 236 SMART SM00862 159 235 2.7E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3087 09e30ffb7da72c3eeeacb9365567b8b5 236 SMART SM00448 4 117 1.3E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3087 09e30ffb7da72c3eeeacb9365567b8b5 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 235 4.6E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3087 09e30ffb7da72c3eeeacb9365567b8b5 236 Gene3D G3DSA:1.10.10.10 137 236 3.7E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3087 09e30ffb7da72c3eeeacb9365567b8b5 236 SUPERFAMILY SSF52172 2 129 7.12E-43 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4546 3ba0615de2d3d3152b74f0d4013e9b84 245 SUPERFAMILY SSF53300 135 234 2.08E-11 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amet_4546 3ba0615de2d3d3152b74f0d4013e9b84 245 Pfam PF00092 von Willebrand factor type A domain 7 85 2.4E-6 T 12-10-2018 IPR002035 von Willebrand factor, type A Amet_4546 3ba0615de2d3d3152b74f0d4013e9b84 245 Gene3D G3DSA:3.40.50.410 1 240 5.0E-57 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amet_4546 3ba0615de2d3d3152b74f0d4013e9b84 245 SUPERFAMILY SSF53300 5 73 2.97E-9 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amet_4546 3ba0615de2d3d3152b74f0d4013e9b84 245 Pfam PF13519 von Willebrand factor type A domain 137 232 2.2E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A Amet_1501 8f645b732a94dad565802f17c0f3138f 306 Gene3D G3DSA:3.40.50.300 1 234 2.1E-57 T 12-10-2018 Amet_1501 8f645b732a94dad565802f17c0f3138f 306 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1501 8f645b732a94dad565802f17c0f3138f 306 SMART SM00382 28 205 1.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1501 8f645b732a94dad565802f17c0f3138f 306 Pfam PF00005 ABC transporter 19 158 3.1E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1501 8f645b732a94dad565802f17c0f3138f 306 SUPERFAMILY SSF52540 3 218 1.09E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2663 b74c67a71f5a1f2e2c6a79aca2f3a6ef 254 SUPERFAMILY SSF52096 44 238 1.34E-38 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_2663 b74c67a71f5a1f2e2c6a79aca2f3a6ef 254 Pfam PF00574 Clp protease 56 230 4.9E-25 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Amet_2663 b74c67a71f5a1f2e2c6a79aca2f3a6ef 254 Gene3D G3DSA:3.90.226.10 41 232 9.7E-31 T 12-10-2018 Amet_0067 7ac164278cdb81b355e942210308fbb4 248 Pfam PF00586 AIR synthase related protein, N-terminal domain 42 122 8.6E-5 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Amet_0067 7ac164278cdb81b355e942210308fbb4 248 Gene3D G3DSA:3.30.1330.10 3 128 4.1E-6 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_0506 b590352850e6bf5af710bfa8197b4395 806 ProSitePatterns PS00850 Glycine radical domain signature. 776 784 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Amet_0506 b590352850e6bf5af710bfa8197b4395 806 SUPERFAMILY SSF51998 15 804 8.55E-219 T 12-10-2018 Amet_0506 b590352850e6bf5af710bfa8197b4395 806 Pfam PF02901 Pyruvate formate lyase-like 16 666 1.5E-213 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Amet_0506 b590352850e6bf5af710bfa8197b4395 806 Pfam PF01228 Glycine radical 683 787 6.1E-28 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 Amet_0506 b590352850e6bf5af710bfa8197b4395 806 Gene3D G3DSA:3.20.70.20 16 804 7.0E-280 T 12-10-2018 Amet_0506 b590352850e6bf5af710bfa8197b4395 806 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 16 803 2.1E-218 T 12-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Amet_3404 68903db81403850d31b322ee578dcd7f 414 SUPERFAMILY SSF53686 19 321 6.02E-99 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_3404 68903db81403850d31b322ee578dcd7f 414 Gene3D G3DSA:3.40.50.1100 22 320 8.7E-121 T 12-10-2018 Amet_3404 68903db81403850d31b322ee578dcd7f 414 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 35 410 7.4E-142 T 12-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Amet_3404 68903db81403850d31b322ee578dcd7f 414 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 315 3.6E-83 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_3404 68903db81403850d31b322ee578dcd7f 414 SUPERFAMILY SSF55021 335 408 3.17E-6 T 12-10-2018 Amet_3404 68903db81403850d31b322ee578dcd7f 414 Gene3D G3DSA:3.40.50.1100 64 160 8.7E-121 T 12-10-2018 Amet_3404 68903db81403850d31b322ee578dcd7f 414 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 56 69 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Amet_1728 67f77075fed6888ab8e6d296d6e8aa36 201 Gene3D G3DSA:3.40.50.150 16 190 1.3E-30 T 12-10-2018 Amet_1728 67f77075fed6888ab8e6d296d6e8aa36 201 Pfam PF13489 Methyltransferase domain 32 143 4.5E-17 T 12-10-2018 Amet_1728 67f77075fed6888ab8e6d296d6e8aa36 201 SUPERFAMILY SSF53335 32 168 3.35E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_4604 912f4a3dcb99419591221052e85eca30 291 SUPERFAMILY SSF54211 4 159 4.17E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_4604 912f4a3dcb99419591221052e85eca30 291 Gene3D G3DSA:3.30.70.890 163 286 4.3E-30 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amet_4604 912f4a3dcb99419591221052e85eca30 291 Gene3D G3DSA:3.30.230.10 1 160 6.7E-61 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_4604 912f4a3dcb99419591221052e85eca30 291 Pfam PF00288 GHMP kinases N terminal domain 88 145 2.3E-10 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Amet_4604 912f4a3dcb99419591221052e85eca30 291 PIRSF PIRSF010376 2 289 1.6E-95 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Amet_4604 912f4a3dcb99419591221052e85eca30 291 Pfam PF08544 GHMP kinases C terminal 200 276 1.0E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain Amet_4604 912f4a3dcb99419591221052e85eca30 291 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 269 2.7E-86 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Amet_4604 912f4a3dcb99419591221052e85eca30 291 SUPERFAMILY SSF55060 162 274 1.69E-27 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amet_4604 912f4a3dcb99419591221052e85eca30 291 PRINTS PR00958 Homoserine kinase signature 169 186 2.1E-7 T 12-10-2018 Amet_4604 912f4a3dcb99419591221052e85eca30 291 PRINTS PR00958 Homoserine kinase signature 8 23 2.1E-7 T 12-10-2018 Amet_4604 912f4a3dcb99419591221052e85eca30 291 PRINTS PR00958 Homoserine kinase signature 104 119 2.1E-7 T 12-10-2018 Amet_4604 912f4a3dcb99419591221052e85eca30 291 PRINTS PR00958 Homoserine kinase signature 242 257 2.1E-7 T 12-10-2018 Amet_4604 912f4a3dcb99419591221052e85eca30 291 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 286 35.663 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 1.9E-138 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 SMART SM00846 3 153 8.5E-96 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 SUPERFAMILY SSF55347 153 315 2.84E-71 T 12-10-2018 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 7.8E-40 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 2.1E-68 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 Gene3D G3DSA:3.30.360.10 152 316 6.0E-156 T 12-10-2018 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 Gene3D G3DSA:3.40.50.720 4 330 6.0E-156 T 12-10-2018 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 2.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 2.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 2.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 2.9E-42 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 SUPERFAMILY SSF51735 1 179 2.08E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3580 d43298f8f39653c7f4ac78dcbd83eb2b 336 PIRSF PIRSF000149 1 335 5.6E-140 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1769 d9a17174f0af3dbc0c1bb95fd7a74167 367 Gene3D G3DSA:3.30.1490.100 202 305 2.4E-15 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amet_1769 d9a17174f0af3dbc0c1bb95fd7a74167 367 Pfam PF00817 impB/mucB/samB family 1 114 5.0E-32 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amet_1769 d9a17174f0af3dbc0c1bb95fd7a74167 367 Gene3D G3DSA:3.30.70.270 34 192 3.5E-54 T 12-10-2018 Amet_1769 d9a17174f0af3dbc0c1bb95fd7a74167 367 Gene3D G3DSA:1.10.150.20 135 187 3.5E-54 T 12-10-2018 Amet_1769 d9a17174f0af3dbc0c1bb95fd7a74167 367 SUPERFAMILY SSF100879 202 310 3.34E-16 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amet_1769 d9a17174f0af3dbc0c1bb95fd7a74167 367 Gene3D G3DSA:2.30.40.20 1 33 3.5E-54 T 12-10-2018 Amet_1769 d9a17174f0af3dbc0c1bb95fd7a74167 367 SUPERFAMILY SSF56672 1 194 7.56E-57 T 12-10-2018 Amet_1769 d9a17174f0af3dbc0c1bb95fd7a74167 367 Pfam PF11799 impB/mucB/samB family C-terminal domain 201 303 1.9E-11 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amet_4610 f6a1d4622ed8a3d818f396392eefddba 88 Pfam PF06257 Biofilm formation stimulator VEG 5 76 7.0E-31 T 12-10-2018 IPR009366 Protein Veg GO:0006355 Amet_4610 f6a1d4622ed8a3d818f396392eefddba 88 Gene3D G3DSA:2.30.30.100 1 80 6.9E-26 T 12-10-2018 Amet_4610 f6a1d4622ed8a3d818f396392eefddba 88 PIRSF PIRSF037257 1 87 1.3E-32 T 12-10-2018 IPR009366 Protein Veg GO:0006355 Amet_3494 10e32b4884e552768e3429ab40272145 104 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 41 52 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3494 10e32b4884e552768e3429ab40272145 104 SUPERFAMILY SSF54862 3 93 2.02E-17 T 12-10-2018 Amet_3494 10e32b4884e552768e3429ab40272145 104 Pfam PF14697 4Fe-4S dicluster domain 4 57 4.7E-10 T 12-10-2018 Amet_3494 10e32b4884e552768e3429ab40272145 104 Gene3D G3DSA:3.30.70.20 3 59 2.4E-15 T 12-10-2018 Amet_3843 f10098d47bf9174b46637729dedb389b 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 293 382 1.6E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3843 f10098d47bf9174b46637729dedb389b 397 Pfam PF10114 Sensory domain found in PocR 26 164 2.4E-10 T 12-10-2018 IPR018771 PocR domain Amet_3843 f10098d47bf9174b46637729dedb389b 397 SUPERFAMILY SSF55874 252 390 1.7E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3843 f10098d47bf9174b46637729dedb389b 397 Pfam PF06580 Histidine kinase 196 274 1.0E-19 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Amet_3843 f10098d47bf9174b46637729dedb389b 397 Gene3D G3DSA:3.30.565.10 248 394 4.9E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0535 566411686fc14601103ecb0f6dd0eff7 278 Pfam PF14343 PrcB C-terminal 98 155 5.2E-14 T 12-10-2018 IPR025748 PrcB C-terminal domain Amet_0535 566411686fc14601103ecb0f6dd0eff7 278 Pfam PF10648 Immunoglobulin-like domain of bacterial spore germination 183 265 1.7E-23 T 12-10-2018 IPR018911 Bacterial spore germination, immunoglobulin-like domain Amet_2601 e11fdca6c96b4679a053a4aec99700e8 250 Gene3D G3DSA:3.40.50.300 47 239 3.4E-50 T 12-10-2018 Amet_2601 e11fdca6c96b4679a053a4aec99700e8 250 SUPERFAMILY SSF52540 64 239 2.24E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2601 e11fdca6c96b4679a053a4aec99700e8 250 PIRSF PIRSF003073 12 250 6.9E-31 T 12-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Amet_2601 e11fdca6c96b4679a053a4aec99700e8 250 Pfam PF01695 IstB-like ATP binding protein 66 231 6.3E-22 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_2134 c9919a262fec483ac31cf7378840fbbf 127 Gene3D G3DSA:2.40.70.10 5 127 9.0E-14 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Amet_2134 c9919a262fec483ac31cf7378840fbbf 127 SUPERFAMILY SSF50630 25 116 4.97E-8 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily Amet_2134 c9919a262fec483ac31cf7378840fbbf 127 Pfam PF13650 Aspartyl protease 25 106 1.9E-12 T 12-10-2018 Amet_3474 014e8511aaa9eea528ad2b214cebdab9 390 SUPERFAMILY SSF53067 15 175 2.35E-8 T 12-10-2018 Amet_3474 014e8511aaa9eea528ad2b214cebdab9 390 SMART SM00842 15 178 0.0039 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Amet_3474 014e8511aaa9eea528ad2b214cebdab9 390 Pfam PF11104 Type IV pilus assembly protein PilM; 18 265 1.2E-24 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Amet_3474 014e8511aaa9eea528ad2b214cebdab9 390 PIRSF PIRSF019169 1 390 5.5E-102 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM Amet_3474 014e8511aaa9eea528ad2b214cebdab9 390 SUPERFAMILY SSF53067 196 387 1.25E-17 T 12-10-2018 Amet_0149 798ededed70ec687eb4b6354fc811fa4 491 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 377 471 8.8E-11 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Amet_0149 798ededed70ec687eb4b6354fc811fa4 491 Gene3D G3DSA:3.90.105.10 421 476 2.5E-18 T 12-10-2018 Amet_0149 798ededed70ec687eb4b6354fc811fa4 491 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 10 373 1.3E-79 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Amet_0149 798ededed70ec687eb4b6354fc811fa4 491 Gene3D G3DSA:3.40.640.10 10 286 4.3E-94 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0149 798ededed70ec687eb4b6354fc811fa4 491 SUPERFAMILY SSF53383 10 390 1.25E-90 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3439 3dafcbba519254739f87fab1d444366c 435 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 212 302 2.5E-27 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amet_3439 3dafcbba519254739f87fab1d444366c 435 SUPERFAMILY SSF52413 318 423 6.02E-24 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Amet_3439 3dafcbba519254739f87fab1d444366c 435 Gene3D G3DSA:3.40.50.720 210 433 2.4E-61 T 12-10-2018 Amet_3439 3dafcbba519254739f87fab1d444366c 435 SMART SM00984 329 424 9.4E-31 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amet_3439 3dafcbba519254739f87fab1d444366c 435 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 329 423 1.6E-21 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amet_3439 3dafcbba519254739f87fab1d444366c 435 SUPERFAMILY SSF51735 15 205 9.02E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3439 3dafcbba519254739f87fab1d444366c 435 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 15 189 8.1E-44 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Amet_3439 3dafcbba519254739f87fab1d444366c 435 PIRSF PIRSF000124 14 434 4.0E-64 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Amet_3439 3dafcbba519254739f87fab1d444366c 435 PIRSF PIRSF500136 4 434 4.0E-155 T 12-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Amet_3439 3dafcbba519254739f87fab1d444366c 435 Gene3D G3DSA:3.40.50.720 2 208 4.4E-63 T 12-10-2018 Amet_3439 3dafcbba519254739f87fab1d444366c 435 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 15 420 8.5E-127 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Amet_3439 3dafcbba519254739f87fab1d444366c 435 SUPERFAMILY SSF48179 211 304 2.55E-29 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 Gene3D G3DSA:1.10.1060.10 1 106 5.2E-32 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 SUPERFAMILY SSF46548 6 119 1.57E-21 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 3 95 2.9E-30 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 111 391 1.1E-29 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 369 387 2.3E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 132 2.3E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 258 2.3E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 333 354 2.3E-10 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 256 1.3E-17 T 12-10-2018 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 359 381 1.3E-17 T 12-10-2018 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 331 347 1.3E-17 T 12-10-2018 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 130 1.3E-17 T 12-10-2018 Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 Gene3D G3DSA:3.50.50.60 234 411 2.0E-31 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 Gene3D G3DSA:3.50.50.60 107 227 4.4E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0679 a5d77ba6ee901c9f00d10b6084007e46 411 SUPERFAMILY SSF51971 110 338 2.59E-52 T 12-10-2018 Amet_0888 bd8d0e3f8fa55f41d039b2433919fd77 244 Gene3D G3DSA:1.10.10.60 138 182 3.6E-11 T 12-10-2018 Amet_0888 bd8d0e3f8fa55f41d039b2433919fd77 244 SUPERFAMILY SSF46689 139 183 9.86E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0888 bd8d0e3f8fa55f41d039b2433919fd77 244 Pfam PF12833 Helix-turn-helix domain 156 233 1.5E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_0888 bd8d0e3f8fa55f41d039b2433919fd77 244 SUPERFAMILY SSF51215 17 66 1.96E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like Amet_0888 bd8d0e3f8fa55f41d039b2433919fd77 244 SMART SM00342 149 232 2.1E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_0888 bd8d0e3f8fa55f41d039b2433919fd77 244 SUPERFAMILY SSF46689 185 236 1.43E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0888 bd8d0e3f8fa55f41d039b2433919fd77 244 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 186 228 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_0888 bd8d0e3f8fa55f41d039b2433919fd77 244 Gene3D G3DSA:1.10.10.60 183 240 2.4E-14 T 12-10-2018 Amet_0037 524aea0c3fa959b9d32ef8bea5b3362c 200 SUPERFAMILY SSF50715 10 183 8.55E-39 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_0037 524aea0c3fa959b9d32ef8bea5b3362c 200 Pfam PF01386 Ribosomal L25p family 6 92 3.8E-18 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amet_0037 524aea0c3fa959b9d32ef8bea5b3362c 200 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 181 5.3E-36 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amet_0037 524aea0c3fa959b9d32ef8bea5b3362c 200 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 2.0E-45 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amet_0037 524aea0c3fa959b9d32ef8bea5b3362c 200 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 183 21.145 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amet_0037 524aea0c3fa959b9d32ef8bea5b3362c 200 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 182 1.1E-14 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain Amet_0037 524aea0c3fa959b9d32ef8bea5b3362c 200 Gene3D G3DSA:2.170.120.20 97 194 2.4E-14 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal Amet_0037 524aea0c3fa959b9d32ef8bea5b3362c 200 Gene3D G3DSA:2.40.240.10 5 95 5.4E-19 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_1030 bcc91d8a2beb07dec8f95974c6ef4599 574 SMART SM00331 343 569 3.8E-22 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_1030 bcc91d8a2beb07dec8f95974c6ef4599 574 Pfam PF17159 Membrane-associated sensor domain 57 285 3.0E-63 T 12-10-2018 IPR033425 Membrane-associated sensor domain MASE3 Amet_1030 bcc91d8a2beb07dec8f95974c6ef4599 574 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 369 568 3.3E-28 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_1030 bcc91d8a2beb07dec8f95974c6ef4599 574 Gene3D G3DSA:3.60.40.10 310 568 1.2E-47 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_2534 86d581e369cf56a194ca2df6bc1814cf 372 Gene3D G3DSA:1.10.150.130 34 166 4.9E-9 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Amet_2534 86d581e369cf56a194ca2df6bc1814cf 372 Pfam PF00589 Phage integrase family 186 358 5.1E-31 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_2534 86d581e369cf56a194ca2df6bc1814cf 372 Gene3D G3DSA:1.10.443.10 173 365 1.3E-38 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_2534 86d581e369cf56a194ca2df6bc1814cf 372 SUPERFAMILY SSF56349 171 365 1.56E-32 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_0720 e4ce7e4ab750bf5e1d29dd3f232d86ed 72 Pfam PF11148 Protein of unknown function (DUF2922) 4 69 6.9E-22 T 12-10-2018 IPR021321 Protein of unknown function DUF2922 Amet_1678 5be9389e432d0e6f8c53ea478e54c93c 786 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 4 786 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amet_1678 5be9389e432d0e6f8c53ea478e54c93c 786 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 626 638 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amet_1678 5be9389e432d0e6f8c53ea478e54c93c 786 Gene3D G3DSA:3.40.50.2000 439 776 0.0 T 12-10-2018 Amet_1678 5be9389e432d0e6f8c53ea478e54c93c 786 PIRSF PIRSF000460 1 786 6.6E-216 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amet_1678 5be9389e432d0e6f8c53ea478e54c93c 786 Gene3D G3DSA:3.40.50.2000 34 786 0.0 T 12-10-2018 Amet_1678 5be9389e432d0e6f8c53ea478e54c93c 786 SUPERFAMILY SSF53756 3 786 1.7E-292 T 12-10-2018 Amet_1678 5be9389e432d0e6f8c53ea478e54c93c 786 Pfam PF00343 Carbohydrate phosphorylase 90 786 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Amet_4473 7c9ffc04746b40961f550329531c386b 110 SUPERFAMILY SSF54843 2 110 2.09E-42 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Amet_4473 7c9ffc04746b40961f550329531c386b 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4473 7c9ffc04746b40961f550329531c386b 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.764 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4473 7c9ffc04746b40961f550329531c386b 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 108 6.7E-36 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Amet_4473 7c9ffc04746b40961f550329531c386b 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.5E-45 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4473 7c9ffc04746b40961f550329531c386b 110 Gene3D G3DSA:3.90.470.10 1 110 1.8E-47 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Amet_2795 9285480db927b1b4f384b9f39d181304 182 Pfam PF00156 Phosphoribosyl transferase domain 8 162 5.4E-24 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amet_2795 9285480db927b1b4f384b9f39d181304 182 Gene3D G3DSA:3.40.50.2020 2 181 4.0E-61 T 12-10-2018 Amet_2795 9285480db927b1b4f384b9f39d181304 182 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 177 38.076 T 12-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Amet_2795 9285480db927b1b4f384b9f39d181304 182 SUPERFAMILY SSF53271 7 171 6.49E-45 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_2389 5787917529178aac288fcbe7edc9bd52 88 Pfam PF01381 Helix-turn-helix 25 76 4.5E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2389 5787917529178aac288fcbe7edc9bd52 88 SMART SM00530 21 76 1.0E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2389 5787917529178aac288fcbe7edc9bd52 88 SUPERFAMILY SSF47413 19 79 1.38E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2389 5787917529178aac288fcbe7edc9bd52 88 Gene3D G3DSA:1.10.260.40 12 82 7.8E-10 T 12-10-2018 Amet_1694 4ce0cac41ab4af41c6c6428501e180aa 370 Pfam PF04015 Domain of unknown function (DUF362) 43 314 2.2E-44 T 12-10-2018 IPR007160 Domain of unknown function DUF362 Amet_1694 4ce0cac41ab4af41c6c6428501e180aa 370 SUPERFAMILY SSF54862 145 294 2.14E-31 T 12-10-2018 Amet_1694 4ce0cac41ab4af41c6c6428501e180aa 370 Gene3D G3DSA:3.30.70.20 190 275 2.2E-19 T 12-10-2018 Amet_1694 4ce0cac41ab4af41c6c6428501e180aa 370 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 225 236 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_1694 4ce0cac41ab4af41c6c6428501e180aa 370 Pfam PF12838 4Fe-4S dicluster domain 196 239 4.5E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_3004 98cb7bdf45ebd554a2cdec8fcba852d3 439 Gene3D G3DSA:1.10.10.10 364 436 9.5E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3004 98cb7bdf45ebd554a2cdec8fcba852d3 439 SUPERFAMILY SSF46785 372 436 1.62E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 SUPERFAMILY SSF74731 3 116 4.06E-49 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.3E-49 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 68 3.0E-21 T 12-10-2018 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 Gene3D G3DSA:1.10.1900.20 56 119 3.2E-29 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 Gene3D G3DSA:1.10.720.90 2 55 3.8E-23 T 12-10-2018 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.481 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 Pfam PF00453 Ribosomal protein L20 3 109 3.5E-47 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.1E-39 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.1E-39 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1635 7a4b7f2b308e8f6b8139ab50d2489b91 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.1E-39 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3581 d64c97dc4bc5b1e698738dcd94bf8802 342 Gene3D G3DSA:3.40.50.1360 90 339 1.5E-74 T 12-10-2018 Amet_3581 d64c97dc4bc5b1e698738dcd94bf8802 342 SUPERFAMILY SSF46785 21 84 9.98E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3581 d64c97dc4bc5b1e698738dcd94bf8802 342 SUPERFAMILY SSF100950 93 337 2.79E-61 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_3581 d64c97dc4bc5b1e698738dcd94bf8802 342 Pfam PF04198 Putative sugar-binding domain 93 338 7.1E-61 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Amet_3581 d64c97dc4bc5b1e698738dcd94bf8802 342 Gene3D G3DSA:1.10.10.10 18 89 7.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0931 dcff33e835d34248a989102e1f34ca83 216 SUPERFAMILY SSF161098 8 201 5.63E-44 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0931 dcff33e835d34248a989102e1f34ca83 216 Gene3D G3DSA:1.10.3720.10 2 216 1.8E-48 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0931 dcff33e835d34248a989102e1f34ca83 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 201 2.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1575 f033ac3b7486752e307e3908c035d408 662 SUPERFAMILY SSF58104 332 661 9.68E-62 T 12-10-2018 Amet_1575 f033ac3b7486752e307e3908c035d408 662 SUPERFAMILY SSF103190 73 164 2.75E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_1575 f033ac3b7486752e307e3908c035d408 662 Gene3D G3DSA:3.30.450.20 137 266 3.6E-26 T 12-10-2018 Amet_1575 f033ac3b7486752e307e3908c035d408 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 601 2.3E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_1575 f033ac3b7486752e307e3908c035d408 662 Gene3D G3DSA:1.10.287.950 418 661 4.3E-55 T 12-10-2018 Amet_1575 f033ac3b7486752e307e3908c035d408 662 Gene3D G3DSA:1.20.1480.50 267 363 2.4E-12 T 12-10-2018 Amet_1575 f033ac3b7486752e307e3908c035d408 662 SMART SM00304 302 357 6.5E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1575 f033ac3b7486752e307e3908c035d408 662 Pfam PF02743 Cache domain 35 264 2.0E-26 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_1575 f033ac3b7486752e307e3908c035d408 662 SMART SM00283 386 661 1.9E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_1291 b56e7433d71779d8e16ec3d525207edc 475 Gene3D G3DSA:3.20.20.140 13 472 1.5E-187 T 12-10-2018 Amet_1291 b56e7433d71779d8e16ec3d525207edc 475 Hamap MF_00675 Uronate isomerase [uxaC]. 7 474 46.834 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 Amet_1291 b56e7433d71779d8e16ec3d525207edc 475 Gene3D G3DSA:1.10.2020.10 51 141 1.5E-187 T 12-10-2018 Amet_1291 b56e7433d71779d8e16ec3d525207edc 475 Pfam PF02614 Glucuronate isomerase 8 472 3.9E-205 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 Amet_1291 b56e7433d71779d8e16ec3d525207edc 475 SUPERFAMILY SSF51556 8 472 2.89E-172 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_0850 b7dae8424915f659e99d95537fc9a873 438 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 344 3.4E-35 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_0850 b7dae8424915f659e99d95537fc9a873 438 SUPERFAMILY SSF52540 1 359 5.58E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0850 b7dae8424915f659e99d95537fc9a873 438 Gene3D G3DSA:3.40.50.300 1 375 2.1E-27 T 12-10-2018 Amet_3484 240e58549642f66c744e10b4aa157be7 438 Gene3D G3DSA:3.80.30.20 159 363 6.2E-22 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_3484 240e58549642f66c744e10b4aa157be7 438 Pfam PF04055 Radical SAM superfamily 165 325 5.9E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3484 240e58549642f66c744e10b4aa157be7 438 SUPERFAMILY SSF102114 140 350 4.05E-32 T 12-10-2018 Amet_3484 240e58549642f66c744e10b4aa157be7 438 SMART SM00729 159 359 3.9E-19 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_1015 1252b1aad50f6f81371ab6790bf6401b 58 SUPERFAMILY SSF140500 6 51 1.83E-5 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 Amet_1015 1252b1aad50f6f81371ab6790bf6401b 58 Pfam PF09388 Spo0E like sporulation regulatory protein 7 48 4.5E-7 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 Amet_2223 21fe79603f9a345db6a8d7e67da05f5c 875 Gene3D G3DSA:3.40.710.10 316 713 5.2E-112 T 12-10-2018 Amet_2223 21fe79603f9a345db6a8d7e67da05f5c 875 SUPERFAMILY SSF56601 272 763 2.25E-108 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_2223 21fe79603f9a345db6a8d7e67da05f5c 875 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 93 690 1.6E-162 T 12-10-2018 Amet_2223 21fe79603f9a345db6a8d7e67da05f5c 875 SUPERFAMILY SSF53955 70 309 1.69E-63 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Amet_2223 21fe79603f9a345db6a8d7e67da05f5c 875 Gene3D G3DSA:1.10.3810.10 74 300 7.5E-65 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2223 21fe79603f9a345db6a8d7e67da05f5c 875 Pfam PF00905 Penicillin binding protein transpeptidase domain 391 685 1.1E-41 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amet_2223 21fe79603f9a345db6a8d7e67da05f5c 875 Pfam PF00912 Transglycosylase 81 256 8.4E-58 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_0004 72bb77c6d311ca64fa8ece17b5719456 368 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 359 3.3E-109 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Amet_0004 72bb77c6d311ca64fa8ece17b5719456 368 Gene3D G3DSA:1.20.1050.90 120 308 5.7E-111 T 12-10-2018 Amet_0004 72bb77c6d311ca64fa8ece17b5719456 368 ProSitePatterns PS00618 RecF protein signature 2. 309 327 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Amet_0004 72bb77c6d311ca64fa8ece17b5719456 368 Gene3D G3DSA:3.40.50.300 6 341 5.7E-111 T 12-10-2018 Amet_0004 72bb77c6d311ca64fa8ece17b5719456 368 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Amet_0004 72bb77c6d311ca64fa8ece17b5719456 368 SUPERFAMILY SSF52540 1 344 3.29E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0004 72bb77c6d311ca64fa8ece17b5719456 368 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 341 1.2E-15 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Amet_0004 72bb77c6d311ca64fa8ece17b5719456 368 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 368 94.094 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Amet_0009 dc493ce92d9371ea4eb9c369a3e6fab3 141 Pfam PF13581 Histidine kinase-like ATPase domain 13 135 4.9E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0009 dc493ce92d9371ea4eb9c369a3e6fab3 141 Gene3D G3DSA:3.30.565.10 5 140 7.7E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0009 dc493ce92d9371ea4eb9c369a3e6fab3 141 SUPERFAMILY SSF55874 33 134 3.8E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4651 04cc5117619d0e1d9cb5bc948fdd6f17 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 424 2.2E-94 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4651 04cc5117619d0e1d9cb5bc948fdd6f17 463 Pfam PF01554 MatE 250 411 1.2E-32 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4651 04cc5117619d0e1d9cb5bc948fdd6f17 463 Pfam PF01554 MatE 23 183 2.0E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4651 04cc5117619d0e1d9cb5bc948fdd6f17 463 PIRSF PIRSF006603 3 461 1.6E-103 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1274 af2395cbc0f9324a2a782dd8c3d33c80 655 Gene3D G3DSA:1.10.3210.10 433 645 1.2E-72 T 12-10-2018 Amet_1274 af2395cbc0f9324a2a782dd8c3d33c80 655 Pfam PF01966 HD domain 455 592 1.9E-16 T 12-10-2018 IPR006674 HD domain Amet_1274 af2395cbc0f9324a2a782dd8c3d33c80 655 SUPERFAMILY SSF55781 255 427 6.76E-14 T 12-10-2018 Amet_1274 af2395cbc0f9324a2a782dd8c3d33c80 655 SUPERFAMILY SSF109604 433 633 1.32E-35 T 12-10-2018 Amet_1274 af2395cbc0f9324a2a782dd8c3d33c80 655 SMART SM00471 450 602 6.6E-7 T 12-10-2018 IPR003607 HD/PDEase domain Amet_1274 af2395cbc0f9324a2a782dd8c3d33c80 655 Gene3D G3DSA:3.30.450.40 258 432 2.9E-16 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_1274 af2395cbc0f9324a2a782dd8c3d33c80 655 Pfam PF13185 GAF domain 284 427 1.5E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_3392 5355e7098bfdc9b78aaa38d83719b701 418 TIGRFAM TIGR00836 amt: ammonium transporter 8 403 1.2E-135 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Amet_3392 5355e7098bfdc9b78aaa38d83719b701 418 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Amet_3392 5355e7098bfdc9b78aaa38d83719b701 418 Pfam PF00909 Ammonium Transporter Family 10 403 4.1E-132 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Amet_3392 5355e7098bfdc9b78aaa38d83719b701 418 Gene3D G3DSA:1.10.3430.10 2 413 2.4E-151 T 12-10-2018 IPR029020 Ammonium/urea transporter Amet_3392 5355e7098bfdc9b78aaa38d83719b701 418 SUPERFAMILY SSF111352 7 384 3.27E-119 T 12-10-2018 Amet_1198 11c76dbf93dc05af0483b610ffaf9acf 288 SUPERFAMILY SSF52518 12 263 8.85E-75 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_1198 11c76dbf93dc05af0483b610ffaf9acf 288 Gene3D G3DSA:3.40.50.970 71 215 1.9E-26 T 12-10-2018 Amet_1198 11c76dbf93dc05af0483b610ffaf9acf 288 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 200 262 4.6E-24 T 12-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal Amet_1198 11c76dbf93dc05af0483b610ffaf9acf 288 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 49 196 1.0E-28 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_1198 11c76dbf93dc05af0483b610ffaf9acf 288 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 15 263 2.2E-89 T 12-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate Amet_4376 605f73f3f42bd0971554266766c3c6f7 158 Pfam PF06725 3D domain 96 151 5.8E-6 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Amet_0406 605f73f3f42bd0971554266766c3c6f7 158 Pfam PF06725 3D domain 96 151 5.8E-6 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Amet_1943 605f73f3f42bd0971554266766c3c6f7 158 Pfam PF06725 3D domain 96 151 5.8E-6 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Amet_2352 c8b385af424642032e8713812ea068d4 170 Gene3D G3DSA:3.40.50.2020 1 170 1.8E-61 T 12-10-2018 Amet_2352 c8b385af424642032e8713812ea068d4 170 Pfam PF00156 Phosphoribosyl transferase domain 28 147 2.4E-11 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amet_2352 c8b385af424642032e8713812ea068d4 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 4.3E-70 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Amet_2352 c8b385af424642032e8713812ea068d4 170 SUPERFAMILY SSF53271 6 165 8.66E-51 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_2352 c8b385af424642032e8713812ea068d4 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 39.149 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Amet_3650 000d35c02f409641eb252869bf91b2d4 221 Gene3D G3DSA:3.40.50.1000 8 196 2.1E-50 T 12-10-2018 IPR023214 HAD superfamily Amet_3650 000d35c02f409641eb252869bf91b2d4 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 187 1.5E-32 T 12-10-2018 Amet_3650 000d35c02f409641eb252869bf91b2d4 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 2.0E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_3650 000d35c02f409641eb252869bf91b2d4 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 2.0E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_3650 000d35c02f409641eb252869bf91b2d4 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.0E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_3650 000d35c02f409641eb252869bf91b2d4 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 2.0E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_3650 000d35c02f409641eb252869bf91b2d4 221 SUPERFAMILY SSF56784 3 213 5.69E-51 T 12-10-2018 IPR036412 HAD-like superfamily Amet_3650 000d35c02f409641eb252869bf91b2d4 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 187 4.3E-15 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_3650 000d35c02f409641eb252869bf91b2d4 221 Gene3D G3DSA:1.10.150.240 19 87 2.1E-50 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Amet_3650 000d35c02f409641eb252869bf91b2d4 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 74 181 6.8E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 SUPERFAMILY SSF53150 114 287 8.89E-38 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Pfam PF01624 MutS domain I 5 116 3.8E-46 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 SMART SM00533 291 599 2.6E-99 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 SUPERFAMILY SSF52540 575 808 1.63E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 869 25.758 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Gene3D G3DSA:1.10.1420.10 273 568 5.5E-106 T 12-10-2018 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Gene3D G3DSA:1.10.1420.10 408 543 5.5E-106 T 12-10-2018 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 SMART SM00534 617 804 1.0E-119 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 4 875 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Gene3D G3DSA:3.40.50.300 576 878 1.7E-104 T 12-10-2018 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 698 714 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Gene3D G3DSA:3.40.1170.10 1 118 1.5E-49 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Pfam PF05188 MutS domain II 125 259 7.1E-18 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Pfam PF05190 MutS family domain IV 436 526 1.2E-29 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Pfam PF00488 MutS domain V 621 807 5.2E-86 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Gene3D G3DSA:3.30.420.110 124 268 8.8E-32 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 SUPERFAMILY SSF48334 274 574 1.29E-91 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 Pfam PF05192 MutS domain III 276 567 1.2E-46 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 PIRSF PIRSF037677 1 857 7.9E-186 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Amet_2544 b98cfc570d5eabffb438ec67da3326c1 880 SUPERFAMILY SSF55271 2 112 7.06E-44 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Amet_1597 4592a2a450b7c33633f4241c7e7e8060 81 Gene3D G3DSA:1.10.260.40 5 79 6.1E-17 T 12-10-2018 Amet_1597 4592a2a450b7c33633f4241c7e7e8060 81 Pfam PF12844 Helix-turn-helix domain 11 78 2.3E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1597 4592a2a450b7c33633f4241c7e7e8060 81 SMART SM00530 13 73 4.1E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1597 4592a2a450b7c33633f4241c7e7e8060 81 SUPERFAMILY SSF47413 2 78 7.6E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_3651 96a16eb32448788354277e98cbc3a99c 235 Pfam PF13367 Protease prsW family 29 206 4.1E-42 T 12-10-2018 IPR026898 Protease PrsW GO:0008233 Amet_3651 96a16eb32448788354277e98cbc3a99c 235 PIRSF PIRSF016933 2 230 8.4E-71 T 12-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 Amet_3280 52824c2fdbc28fa69f221b3c665fc146 440 Pfam PF04055 Radical SAM superfamily 167 322 9.6E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3280 52824c2fdbc28fa69f221b3c665fc146 440 Gene3D G3DSA:3.80.30.20 161 361 2.1E-24 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_3280 52824c2fdbc28fa69f221b3c665fc146 440 SUPERFAMILY SSF102114 139 390 2.35E-37 T 12-10-2018 Amet_3280 52824c2fdbc28fa69f221b3c665fc146 440 Pfam PF02310 B12 binding domain 61 123 6.2E-11 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_3280 52824c2fdbc28fa69f221b3c665fc146 440 Pfam PF13282 Domain of unknown function (DUF4070) 343 407 1.2E-5 T 12-10-2018 IPR025274 Domain of unknown function DUF4070 Amet_3280 52824c2fdbc28fa69f221b3c665fc146 440 Gene3D G3DSA:3.40.50.280 17 135 8.4E-13 T 12-10-2018 Amet_3280 52824c2fdbc28fa69f221b3c665fc146 440 SMART SM00729 161 367 1.7E-26 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 Gene3D G3DSA:3.30.230.80 235 402 2.6E-54 T 12-10-2018 Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 SUPERFAMILY SSF54211 236 488 1.52E-78 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 Gene3D G3DSA:1.20.120.790 493 626 9.1E-36 T 12-10-2018 IPR037196 HSP90, C-terminal domain Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 PRINTS PR00775 90kDa heat shock protein signature 90 107 2.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 PRINTS PR00775 90kDa heat shock protein signature 115 137 2.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 PRINTS PR00775 90kDa heat shock protein signature 165 182 2.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 PRINTS PR00775 90kDa heat shock protein signature 23 45 2.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 PRINTS PR00775 90kDa heat shock protein signature 188 206 2.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 PRINTS PR00775 90kDa heat shock protein signature 2 22 2.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 PRINTS PR00775 90kDa heat shock protein signature 72 89 2.5E-51 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 Pfam PF00183 Hsp90 protein 219 625 6.1E-109 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 Pfam PF00183 Hsp90 protein 184 224 7.8E-6 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 Gene3D G3DSA:3.40.50.11260 403 488 8.4E-26 T 12-10-2018 Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 626 26.602 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 PIRSF PIRSF002583 1 626 2.0E-198 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 149 4.0E-12 T 12-10-2018 Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 Gene3D G3DSA:3.30.565.10 2 227 2.5E-72 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 SUPERFAMILY SSF55874 3 211 6.34E-60 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0521 b7306dd90feace0cc6d6d5bf34c33579 626 SUPERFAMILY SSF110942 512 625 1.96E-29 T 12-10-2018 IPR037196 HSP90, C-terminal domain Amet_3612 ab6ea6fc6321ee259c60868001c0cf28 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 241 4.3E-27 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Amet_3612 ab6ea6fc6321ee259c60868001c0cf28 274 SUPERFAMILY SSF56784 1 273 1.31E-70 T 12-10-2018 IPR036412 HAD-like superfamily Amet_3612 ab6ea6fc6321ee259c60868001c0cf28 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 268 1.5E-67 T 12-10-2018 Amet_3612 ab6ea6fc6321ee259c60868001c0cf28 274 Gene3D G3DSA:3.30.1240.10 84 197 2.2E-73 T 12-10-2018 Amet_3612 ab6ea6fc6321ee259c60868001c0cf28 274 Gene3D G3DSA:3.40.50.1000 5 268 2.2E-73 T 12-10-2018 IPR023214 HAD superfamily Amet_3612 ab6ea6fc6321ee259c60868001c0cf28 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 268 1.7E-60 T 12-10-2018 IPR000150 Cof family GO:0016787 Amet_3612 ab6ea6fc6321ee259c60868001c0cf28 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 12-10-2018 Amet_0022 4286f7969fe96d2a9ce9ef02ab8e044c 932 Pfam PF03699 Uncharacterised protein family (UPF0182) 20 783 7.2E-273 T 12-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 Amet_0022 4286f7969fe96d2a9ce9ef02ab8e044c 932 Hamap MF_01600 UPF0182 protein . 6 859 18.246 T 12-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 Amet_4605 f4c3ec72114238dcc7478bd5cba0ed88 523 Pfam PF12673 Domain of unknown function (DUF3794) 37 118 2.3E-18 T 12-10-2018 IPR024300 Domain of unknown function DUF3794 Amet_4605 f4c3ec72114238dcc7478bd5cba0ed88 523 Pfam PF12673 Domain of unknown function (DUF3794) 189 268 1.3E-15 T 12-10-2018 IPR024300 Domain of unknown function DUF3794 Amet_4605 f4c3ec72114238dcc7478bd5cba0ed88 523 Pfam PF12673 Domain of unknown function (DUF3794) 345 426 1.9E-15 T 12-10-2018 IPR024300 Domain of unknown function DUF3794 Amet_4605 f4c3ec72114238dcc7478bd5cba0ed88 523 Pfam PF01476 LysM domain 476 515 8.3E-10 T 12-10-2018 IPR018392 LysM domain Amet_4605 f4c3ec72114238dcc7478bd5cba0ed88 523 SMART SM00257 472 516 2.0E-7 T 12-10-2018 IPR018392 LysM domain Amet_4605 f4c3ec72114238dcc7478bd5cba0ed88 523 SUPERFAMILY SSF54106 471 515 7.19E-8 T 12-10-2018 Amet_4605 f4c3ec72114238dcc7478bd5cba0ed88 523 Gene3D G3DSA:3.10.350.10 468 520 5.2E-11 T 12-10-2018 IPR036779 LysM domain superfamily Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 PRINTS PR01469 Bacterial carbamate kinase signature 47 66 2.4E-63 T 12-10-2018 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 PRINTS PR01469 Bacterial carbamate kinase signature 116 135 2.4E-63 T 12-10-2018 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 PRINTS PR01469 Bacterial carbamate kinase signature 274 289 2.4E-63 T 12-10-2018 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 PRINTS PR01469 Bacterial carbamate kinase signature 81 99 2.4E-63 T 12-10-2018 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 PRINTS PR01469 Bacterial carbamate kinase signature 219 234 2.4E-63 T 12-10-2018 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 PRINTS PR01469 Bacterial carbamate kinase signature 165 184 2.4E-63 T 12-10-2018 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 PRINTS PR01469 Bacterial carbamate kinase signature 188 206 2.4E-63 T 12-10-2018 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 SUPERFAMILY SSF53633 7 317 1.1E-79 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 TIGRFAM TIGR00746 arcC: carbamate kinase 7 318 5.5E-116 T 12-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 Pfam PF00696 Amino acid kinase family 6 301 1.5E-29 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 PIRSF PIRSF000723 4 320 7.1E-124 T 12-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 Amet_4607 f9c301e0ce72b10947b0e748e3b711b3 320 Gene3D G3DSA:3.40.1160.10 2 319 5.7E-119 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_2734 937818398acab74e598cd7ce592b6d30 259 SUPERFAMILY SSF46785 168 257 1.25E-40 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2734 937818398acab74e598cd7ce592b6d30 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 134.939 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Amet_2734 937818398acab74e598cd7ce592b6d30 259 Pfam PF06018 CodY GAF-like domain 4 179 8.0E-63 T 12-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 Amet_2734 937818398acab74e598cd7ce592b6d30 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 5 254 1.1E-109 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Amet_2734 937818398acab74e598cd7ce592b6d30 259 Gene3D G3DSA:1.10.10.10 165 259 1.8E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2734 937818398acab74e598cd7ce592b6d30 259 Gene3D G3DSA:3.30.450.40 3 164 3.2E-58 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_2734 937818398acab74e598cd7ce592b6d30 259 Pfam PF08222 CodY helix-turn-helix domain 199 258 7.4E-34 T 12-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal Amet_2734 937818398acab74e598cd7ce592b6d30 259 PIRSF PIRSF011572 1 258 6.8E-113 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 Gene3D G3DSA:1.10.10.60 541 588 5.0E-11 T 12-10-2018 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 SUPERFAMILY SSF52540 278 523 1.25E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4666 6143f1662b17926b6e7adeff333ff990 593 SUPERFAMILY SSF55781 10 112 8.63E-8 T 12-10-2018 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 Pfam PF00158 Sigma-54 interaction domain 279 446 3.3E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 SMART SM00091 154 220 1.3E-7 T 12-10-2018 IPR000014 PAS domain Amet_4666 6143f1662b17926b6e7adeff333ff990 593 Gene3D G3DSA:3.30.450.20 144 257 3.3E-13 T 12-10-2018 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 SUPERFAMILY SSF55785 155 252 1.93E-11 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4666 6143f1662b17926b6e7adeff333ff990 593 Gene3D G3DSA:3.30.450.40 3 143 2.8E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_4666 6143f1662b17926b6e7adeff333ff990 593 Gene3D G3DSA:3.40.50.300 266 450 1.4E-65 T 12-10-2018 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 493 502 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_4666 6143f1662b17926b6e7adeff333ff990 593 SUPERFAMILY SSF46689 493 588 7.47E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 SMART SM00382 299 443 2.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4666 6143f1662b17926b6e7adeff333ff990 593 Pfam PF00989 PAS fold 155 207 8.0E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 Pfam PF02954 Bacterial regulatory protein, Fis family 543 584 1.7E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 303 316 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 366 381 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_4666 6143f1662b17926b6e7adeff333ff990 593 Gene3D G3DSA:1.10.8.60 451 530 3.4E-23 T 12-10-2018 Amet_2234 e2f665906dce96892122f7c4200fb3ba 247 SUPERFAMILY SSF52402 6 244 3.96E-74 T 12-10-2018 Amet_2234 e2f665906dce96892122f7c4200fb3ba 247 Pfam PF02540 NAD synthase 7 240 4.7E-69 T 12-10-2018 IPR022310 NAD/GMP synthase Amet_2234 e2f665906dce96892122f7c4200fb3ba 247 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 2 245 47.387 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 Amet_2234 e2f665906dce96892122f7c4200fb3ba 247 TIGRFAM TIGR00552 nadE: NAD+ synthetase 6 242 8.7E-75 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Amet_2234 e2f665906dce96892122f7c4200fb3ba 247 Gene3D G3DSA:3.40.50.620 1 245 7.8E-76 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_1463 6087b2cf947bf29d764263b6948fa69d 116 SUPERFAMILY SSF88659 33 81 2.43E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_1463 6087b2cf947bf29d764263b6948fa69d 116 Gene3D G3DSA:1.10.10.10 22 83 4.0E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1463 6087b2cf947bf29d764263b6948fa69d 116 Pfam PF02001 Protein of unknown function DUF134 3 95 9.1E-23 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 Amet_1463 6087b2cf947bf29d764263b6948fa69d 116 Hamap MF_00674 UPF0251 protein . 2 98 22.508 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 Amet_1639 0d89e7cf2b867b2e6c8287ad366fa630 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 339 9.9E-108 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Amet_1639 0d89e7cf2b867b2e6c8287ad366fa630 339 Pfam PF01409 tRNA synthetases class II core domain (F) 93 339 3.5E-105 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Amet_1639 0d89e7cf2b867b2e6c8287ad366fa630 339 SUPERFAMILY SSF46589 15 99 3.5E-19 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Amet_1639 0d89e7cf2b867b2e6c8287ad366fa630 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 339 47.445 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Amet_1639 0d89e7cf2b867b2e6c8287ad366fa630 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 2.9E-23 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Amet_1639 0d89e7cf2b867b2e6c8287ad366fa630 339 Gene3D G3DSA:3.30.930.10 8 339 1.5E-125 T 12-10-2018 Amet_1639 0d89e7cf2b867b2e6c8287ad366fa630 339 SUPERFAMILY SSF55681 93 339 4.15E-81 T 12-10-2018 Amet_0783 ec59fa9dd0bec0630afc86969206d169 288 ProSitePatterns PS00770 Aminotransferases class-IV signature. 176 204 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Amet_0783 ec59fa9dd0bec0630afc86969206d169 288 SUPERFAMILY SSF56752 28 274 1.57E-47 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Amet_0783 ec59fa9dd0bec0630afc86969206d169 288 Gene3D G3DSA:3.30.470.10 2 113 1.7E-17 T 12-10-2018 Amet_0783 ec59fa9dd0bec0630afc86969206d169 288 Gene3D G3DSA:3.20.10.10 121 281 1.9E-30 T 12-10-2018 Amet_0783 ec59fa9dd0bec0630afc86969206d169 288 Pfam PF01063 Amino-transferase class IV 38 249 2.5E-49 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Amet_3259 d04377722fbb2454638ebd6d8710c81d 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 1.8E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3259 d04377722fbb2454638ebd6d8710c81d 232 SMART SM00448 6 116 9.2E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3259 d04377722fbb2454638ebd6d8710c81d 232 Gene3D G3DSA:3.40.50.2300 1 126 2.4E-38 T 12-10-2018 Amet_3259 d04377722fbb2454638ebd6d8710c81d 232 Gene3D G3DSA:1.10.10.10 129 232 5.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3259 d04377722fbb2454638ebd6d8710c81d 232 SUPERFAMILY SSF52172 3 124 6.12E-40 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3259 d04377722fbb2454638ebd6d8710c81d 232 SUPERFAMILY SSF46894 137 228 5.95E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_3259 d04377722fbb2454638ebd6d8710c81d 232 Pfam PF00072 Response regulator receiver domain 8 117 1.7E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3259 d04377722fbb2454638ebd6d8710c81d 232 SMART SM00862 153 227 4.7E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_0957 a243b5b6810cf895b45da3e1fe2dc161 203 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 6 196 1.4E-57 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Amet_0957 a243b5b6810cf895b45da3e1fe2dc161 203 Pfam PF01725 Ham1 family 6 193 2.0E-58 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Amet_0957 a243b5b6810cf895b45da3e1fe2dc161 203 Hamap MF_01405 dITP/XTP pyrophosphatase. 4 198 48.663 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Amet_0957 a243b5b6810cf895b45da3e1fe2dc161 203 Gene3D G3DSA:3.90.950.10 2 201 9.2E-78 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Amet_0957 a243b5b6810cf895b45da3e1fe2dc161 203 SUPERFAMILY SSF52972 6 196 5.23E-69 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Amet_3777 4de9f74182e351f8af960c871fdf764b 568 SMART SM00283 292 567 3.1E-51 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3777 4de9f74182e351f8af960c871fdf764b 568 SUPERFAMILY SSF58104 231 567 1.31E-61 T 12-10-2018 Amet_3777 4de9f74182e351f8af960c871fdf764b 568 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 368 518 7.3E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3777 4de9f74182e351f8af960c871fdf764b 568 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 184 2.9E-14 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Amet_3777 4de9f74182e351f8af960c871fdf764b 568 Gene3D G3DSA:1.10.287.950 259 567 1.1E-60 T 12-10-2018 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 SUPERFAMILY SSF53623 106 314 1.44E-49 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 456 4.9E-117 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 Gene3D G3DSA:3.90.190.20 318 457 5.4E-33 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 395 6.6E-8 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 Pfam PF01225 Mur ligase family, catalytic domain 27 101 7.7E-8 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 Gene3D G3DSA:3.40.1390.10 2 81 4.6E-19 T 12-10-2018 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 Pfam PF08245 Mur ligase middle domain 111 298 9.0E-45 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 SUPERFAMILY SSF63418 14 102 1.96E-22 T 12-10-2018 IPR035911 MurE/MurF, N-terminal Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 SUPERFAMILY SSF53244 319 456 1.24E-26 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 Gene3D G3DSA:3.40.1190.10 87 315 3.6E-64 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_3709 55f5ab976dbebaa6bdd4dd3db78b4db9 457 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 457 31.025 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_1593 bdb3324bd21b70f4f4bb08395c345494 366 Gene3D G3DSA:1.10.150.130 34 138 2.2E-11 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Amet_1593 bdb3324bd21b70f4f4bb08395c345494 366 Gene3D G3DSA:1.10.443.10 170 364 6.6E-40 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_1593 bdb3324bd21b70f4f4bb08395c345494 366 Pfam PF00589 Phage integrase family 179 349 8.8E-31 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_1593 bdb3324bd21b70f4f4bb08395c345494 366 SUPERFAMILY SSF56349 39 355 7.36E-35 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_1665 dd6a5c43adea5cea920042e846c59923 286 Pfam PF05107 CRISPR-associated protein Cas7 6 271 1.2E-82 T 12-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C Amet_1665 dd6a5c43adea5cea920042e846c59923 286 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 7 271 1.5E-100 T 12-10-2018 IPR013418 CRISPR-associated protein Csd2 Amet_1665 dd6a5c43adea5cea920042e846c59923 286 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 5 265 4.7E-74 T 12-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C Amet_0158 fa60473e61a370bb4fc4897dc7cb219a 185 Gene3D G3DSA:3.40.50.1470 1 185 8.0E-71 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Amet_0158 fa60473e61a370bb4fc4897dc7cb219a 185 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 184 1.8E-63 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Amet_0158 fa60473e61a370bb4fc4897dc7cb219a 185 SUPERFAMILY SSF53178 1 184 1.7E-65 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Amet_0158 fa60473e61a370bb4fc4897dc7cb219a 185 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Amet_0158 fa60473e61a370bb4fc4897dc7cb219a 185 Pfam PF01195 Peptidyl-tRNA hydrolase 3 184 1.5E-59 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Amet_0158 fa60473e61a370bb4fc4897dc7cb219a 185 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 35.331 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Amet_0158 fa60473e61a370bb4fc4897dc7cb219a 185 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Amet_1460 533db9fa17f4df41ddefd052c69e460a 660 Pfam PF02687 FtsX-like permease family 85 178 3.5E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_1460 533db9fa17f4df41ddefd052c69e460a 660 PIRSF PIRSF018968 1 660 4.7E-88 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 Amet_4675 6c3716e100a0fb38494592821cfb3cdc 226 SUPERFAMILY SSF46689 173 221 1.21E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4675 6c3716e100a0fb38494592821cfb3cdc 226 Pfam PF12833 Helix-turn-helix domain 143 221 1.0E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_4675 6c3716e100a0fb38494592821cfb3cdc 226 SMART SM00342 137 220 3.9E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_4675 6c3716e100a0fb38494592821cfb3cdc 226 Gene3D G3DSA:1.10.10.60 121 169 5.3E-19 T 12-10-2018 Amet_4675 6c3716e100a0fb38494592821cfb3cdc 226 SUPERFAMILY SSF46689 123 171 3.72E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4675 6c3716e100a0fb38494592821cfb3cdc 226 Gene3D G3DSA:1.10.10.60 170 223 6.6E-18 T 12-10-2018 Amet_4675 6c3716e100a0fb38494592821cfb3cdc 226 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 174 216 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_3822 f4b8aebc9f87c7f9e60420cd80fc9205 99 Gene3D G3DSA:3.30.70.1710 1 99 8.6E-41 T 12-10-2018 Amet_3822 f4b8aebc9f87c7f9e60420cd80fc9205 99 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 49 3.0E-20 T 12-10-2018 Amet_3822 f4b8aebc9f87c7f9e60420cd80fc9205 99 SMART SM00877 4 80 3.4E-36 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3822 f4b8aebc9f87c7f9e60420cd80fc9205 99 SUPERFAMILY SSF143414 3 95 2.62E-32 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_3822 f4b8aebc9f87c7f9e60420cd80fc9205 99 Pfam PF00936 BMC domain 5 80 7.6E-28 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_1346 b0290826fdc926c63b2ca73c260763cb 169 SUPERFAMILY SSF47240 1 161 9.66E-55 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_1346 b0290826fdc926c63b2ca73c260763cb 169 Pfam PF00210 Ferritin-like domain 9 144 2.7E-41 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Amet_1346 b0290826fdc926c63b2ca73c260763cb 169 Gene3D G3DSA:1.20.1260.10 1 169 5.4E-49 T 12-10-2018 IPR012347 Ferritin-like Amet_3391 0dbacb97336cbec2d36f2c1eea69689f 120 Gene3D G3DSA:3.30.70.120 1 116 7.4E-41 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amet_3391 0dbacb97336cbec2d36f2c1eea69689f 120 Pfam PF00543 Nitrogen regulatory protein P-II 8 109 2.0E-32 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3391 0dbacb97336cbec2d36f2c1eea69689f 120 PRINTS PR00340 P-II protein signature 87 107 8.9E-29 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3391 0dbacb97336cbec2d36f2c1eea69689f 120 PRINTS PR00340 P-II protein signature 27 45 8.9E-29 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3391 0dbacb97336cbec2d36f2c1eea69689f 120 PRINTS PR00340 P-II protein signature 6 21 8.9E-29 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3391 0dbacb97336cbec2d36f2c1eea69689f 120 PRINTS PR00340 P-II protein signature 56 79 8.9E-29 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3391 0dbacb97336cbec2d36f2c1eea69689f 120 ProSitePatterns PS00638 P-II protein C-terminal region signature. 87 100 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Amet_3391 0dbacb97336cbec2d36f2c1eea69689f 120 SUPERFAMILY SSF54913 6 118 1.27E-34 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amet_3391 0dbacb97336cbec2d36f2c1eea69689f 120 SMART SM00938 8 109 2.3E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3704 980832d47ed4030e7af52008cbc53e6a 460 Pfam PF03553 Na+/H+ antiporter family 174 443 3.9E-28 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Amet_0098 f9986fd1d77489b087f0206453dfa74c 188 Pfam PF04647 Accessory gene regulator B 8 180 2.4E-33 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_0098 f9986fd1d77489b087f0206453dfa74c 188 SMART SM00793 3 187 2.5E-8 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_2947 e21d4b8d193bf3bd3261df054163ddc7 371 Gene3D G3DSA:3.90.550.10 14 265 6.7E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_2947 e21d4b8d193bf3bd3261df054163ddc7 371 Gene3D G3DSA:2.160.10.10 267 371 5.4E-25 T 12-10-2018 Amet_2947 e21d4b8d193bf3bd3261df054163ddc7 371 SUPERFAMILY SSF51161 289 356 4.71E-12 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_2947 e21d4b8d193bf3bd3261df054163ddc7 371 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 3 370 3.3E-116 T 12-10-2018 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 Amet_2947 e21d4b8d193bf3bd3261df054163ddc7 371 Pfam PF00483 Nucleotidyl transferase 17 176 6.4E-12 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amet_2947 e21d4b8d193bf3bd3261df054163ddc7 371 SUPERFAMILY SSF53448 17 319 5.16E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_1710 567b6431742f75a04e543f866c5cfb93 603 SUPERFAMILY SSF54980 304 387 1.97E-11 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_1710 567b6431742f75a04e543f866c5cfb93 603 Pfam PF03144 Elongation factor Tu domain 2 220 290 1.2E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Amet_1710 567b6431742f75a04e543f866c5cfb93 603 SUPERFAMILY SSF50447 181 301 1.74E-28 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_1710 567b6431742f75a04e543f866c5cfb93 603 Pfam PF00679 Elongation factor G C-terminus 396 481 5.1E-22 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Amet_1710 567b6431742f75a04e543f866c5cfb93 603 Gene3D G3DSA:2.40.30.10 201 299 1.1E-29 T 12-10-2018 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 Gene3D G3DSA:2.40.50.250 482 597 1.3E-121 T 12-10-2018 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 140 6.3E-25 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 598 2.0E-278 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 SMART SM00838 395 483 5.4E-4 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like Amet_1710 567b6431742f75a04e543f866c5cfb93 603 Gene3D G3DSA:3.30.70.870 307 589 1.3E-121 T 12-10-2018 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 Gene3D G3DSA:3.30.70.240 389 481 1.3E-121 T 12-10-2018 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 PRINTS PR00315 GTP-binding elongation factor signature 72 82 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 PRINTS PR00315 GTP-binding elongation factor signature 124 133 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 PRINTS PR00315 GTP-binding elongation factor signature 8 21 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 PRINTS PR00315 GTP-binding elongation factor signature 88 99 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 Gene3D G3DSA:3.40.50.300 3 199 7.9E-70 T 12-10-2018 Amet_1710 567b6431742f75a04e543f866c5cfb93 603 SUPERFAMILY SSF52540 2 206 1.67E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1710 567b6431742f75a04e543f866c5cfb93 603 SUPERFAMILY SSF54980 398 511 1.44E-27 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_1710 567b6431742f75a04e543f866c5cfb93 603 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 4.6E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_1168 60dc4e2d743fafb2b2a3d6c845cf9e11 500 Gene3D G3DSA:3.30.870.10 135 327 6.5E-47 T 12-10-2018 Amet_1168 60dc4e2d743fafb2b2a3d6c845cf9e11 500 Pfam PF13091 PLD-like domain 346 460 1.2E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Amet_1168 60dc4e2d743fafb2b2a3d6c845cf9e11 500 Pfam PF13091 PLD-like domain 154 297 1.5E-15 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Amet_1168 60dc4e2d743fafb2b2a3d6c845cf9e11 500 SMART SM00155 413 440 0.0072 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Amet_1168 60dc4e2d743fafb2b2a3d6c845cf9e11 500 SMART SM00155 237 264 1.1E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Amet_1168 60dc4e2d743fafb2b2a3d6c845cf9e11 500 Gene3D G3DSA:3.30.870.10 328 474 5.3E-26 T 12-10-2018 Amet_1168 60dc4e2d743fafb2b2a3d6c845cf9e11 500 SUPERFAMILY SSF56024 289 485 7.85E-43 T 12-10-2018 Amet_1168 60dc4e2d743fafb2b2a3d6c845cf9e11 500 SUPERFAMILY SSF56024 117 328 1.1E-51 T 12-10-2018 Amet_1168 60dc4e2d743fafb2b2a3d6c845cf9e11 500 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 72 499 9.7E-125 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Amet_3783 e1fe6b8ce7265bad6d7416c63d33c122 534 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 38 199 4.4E-15 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Amet_3783 e1fe6b8ce7265bad6d7416c63d33c122 534 Gene3D G3DSA:1.10.1040.10 316 534 5.5E-54 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amet_3783 e1fe6b8ce7265bad6d7416c63d33c122 534 SUPERFAMILY SSF51735 14 312 9.45E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3783 e1fe6b8ce7265bad6d7416c63d33c122 534 SUPERFAMILY SSF48179 316 532 2.21E-37 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_3783 e1fe6b8ce7265bad6d7416c63d33c122 534 Gene3D G3DSA:3.40.50.720 17 311 8.7E-71 T 12-10-2018 Amet_3783 e1fe6b8ce7265bad6d7416c63d33c122 534 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 236 460 2.3E-27 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Amet_3445 2a15242518a519431783f9e01e20b455 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 49 8.6E-11 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_3445 2a15242518a519431783f9e01e20b455 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 0.0016 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_3445 2a15242518a519431783f9e01e20b455 193 Gene3D G3DSA:2.160.10.10 3 152 2.4E-42 T 12-10-2018 Amet_3445 2a15242518a519431783f9e01e20b455 193 SUPERFAMILY SSF51161 4 163 4.58E-42 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 Gene3D G3DSA:1.10.1670.40 163 351 1.2E-65 T 12-10-2018 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 SMART SM00478 203 354 3.1E-5 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 71 150 1.9E-32 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 SUPERFAMILY SSF46767 70 151 1.26E-29 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 SUPERFAMILY SSF53155 3 76 1.45E-12 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 199 338 1.3E-15 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 Gene3D G3DSA:1.10.10.10 70 155 4.6E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 150 9.4E-29 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 121 127 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 Gene3D G3DSA:3.30.160.70 3 66 2.0E-10 T 12-10-2018 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 SUPERFAMILY SSF48150 192 352 7.85E-36 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 Gene3D G3DSA:1.10.340.30 191 302 1.2E-65 T 12-10-2018 Amet_3514 47fc208b6b14cc592c273dfac4d7acfe 355 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 4 151 41.419 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 Amet_3501 afa7c41b944b29995a353fbf2c53e223 269 SUPERFAMILY SSF69572 3 258 1.06E-91 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Amet_3501 afa7c41b944b29995a353fbf2c53e223 269 Pfam PF00899 ThiF family 11 247 1.3E-62 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Amet_3501 afa7c41b944b29995a353fbf2c53e223 269 Gene3D G3DSA:3.40.50.720 3 256 2.5E-91 T 12-10-2018 Amet_0324 c330e4691785dcfdca28f5589387080f 65 Pfam PF01197 Ribosomal protein L31 1 64 9.5E-33 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_0324 c330e4691785dcfdca28f5589387080f 65 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.8E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_0324 c330e4691785dcfdca28f5589387080f 65 Gene3D G3DSA:2.30.170.50 1 65 2.0E-32 T 12-10-2018 Amet_0324 c330e4691785dcfdca28f5589387080f 65 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 64 26.557 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_0324 c330e4691785dcfdca28f5589387080f 65 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.3E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_0324 c330e4691785dcfdca28f5589387080f 65 PRINTS PR01249 Ribosomal protein L31 signature 30 45 2.3E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_0324 c330e4691785dcfdca28f5589387080f 65 PRINTS PR01249 Ribosomal protein L31 signature 45 63 2.3E-21 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_0324 c330e4691785dcfdca28f5589387080f 65 SUPERFAMILY SSF143800 1 65 3.3E-27 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_0324 c330e4691785dcfdca28f5589387080f 65 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4478 28dfe534daec7372aab4c9b52cff61a6 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 206 40.009 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4478 28dfe534daec7372aab4c9b52cff61a6 210 Gene3D G3DSA:2.40.30.10 130 209 1.3E-15 T 12-10-2018 Amet_4478 28dfe534daec7372aab4c9b52cff61a6 210 Gene3D G3DSA:2.40.50.620 32 96 3.8E-20 T 12-10-2018 Amet_4478 28dfe534daec7372aab4c9b52cff61a6 210 Pfam PF00297 Ribosomal protein L3 85 181 2.4E-17 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4478 28dfe534daec7372aab4c9b52cff61a6 210 SUPERFAMILY SSF50447 1 208 1.85E-80 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_4478 28dfe534daec7372aab4c9b52cff61a6 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 202 1.2E-87 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4478 28dfe534daec7372aab4c9b52cff61a6 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site Amet_1919 07d91c2330f4aaaf4aae10686ff3f4d3 315 SUPERFAMILY SSF52540 9 228 1.25E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1919 07d91c2330f4aaaf4aae10686ff3f4d3 315 SMART SM00382 38 229 4.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1919 07d91c2330f4aaaf4aae10686ff3f4d3 315 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1919 07d91c2330f4aaaf4aae10686ff3f4d3 315 Gene3D G3DSA:3.40.50.300 2 244 3.9E-59 T 12-10-2018 Amet_1919 07d91c2330f4aaaf4aae10686ff3f4d3 315 Pfam PF00005 ABC transporter 29 169 4.6E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0161 03046c2e652b348139de2c6cd8988221 319 Gene3D G3DSA:1.10.4030.10 30 161 1.3E-10 T 12-10-2018 Amet_0161 03046c2e652b348139de2c6cd8988221 319 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 215 236 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Amet_0161 03046c2e652b348139de2c6cd8988221 319 Pfam PF13624 SurA N-terminal domain 10 157 9.3E-14 T 12-10-2018 Amet_0161 03046c2e652b348139de2c6cd8988221 319 Pfam PF13616 PPIC-type PPIASE domain 188 277 1.1E-24 T 12-10-2018 Amet_0161 03046c2e652b348139de2c6cd8988221 319 Gene3D G3DSA:3.10.50.40 186 278 5.9E-32 T 12-10-2018 Amet_0161 03046c2e652b348139de2c6cd8988221 319 SUPERFAMILY SSF54534 187 276 7.2E-30 T 12-10-2018 Amet_0161 03046c2e652b348139de2c6cd8988221 319 SUPERFAMILY SSF109998 34 216 6.18E-27 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Amet_3382 1ec7150b266df1ea687624bb7d8c0b7b 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 141.605 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amet_3382 1ec7150b266df1ea687624bb7d8c0b7b 406 Pfam PF01960 ArgJ family 19 406 1.4E-145 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amet_3382 1ec7150b266df1ea687624bb7d8c0b7b 406 Gene3D G3DSA:3.10.20.340 274 406 6.0E-44 T 12-10-2018 Amet_3382 1ec7150b266df1ea687624bb7d8c0b7b 406 SUPERFAMILY SSF56266 14 402 4.32E-133 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amet_3382 1ec7150b266df1ea687624bb7d8c0b7b 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 30 406 0.0 T 12-10-2018 Amet_3382 1ec7150b266df1ea687624bb7d8c0b7b 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 8 406 9.6E-148 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amet_3382 1ec7150b266df1ea687624bb7d8c0b7b 406 Gene3D G3DSA:3.30.2330.10 189 273 2.6E-31 T 12-10-2018 Amet_3382 1ec7150b266df1ea687624bb7d8c0b7b 406 Gene3D G3DSA:3.60.70.12 2 188 4.8E-69 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 Gene3D G3DSA:1.10.10.10 4 69 2.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 SMART SM00345 9 68 1.2E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 SUPERFAMILY SSF64288 79 236 1.37E-28 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 Gene3D G3DSA:3.40.1410.10 73 236 5.2E-30 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 66 1.4E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 SMART SM00866 91 232 8.4E-16 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 SUPERFAMILY SSF46785 7 76 2.25E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1150 00d9dedc5cbf20a9d28f47d213dcee48 236 Pfam PF07702 UTRA domain 92 232 1.4E-22 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Amet_0695 d36503830a9b3856faeed1685395c860 207 Pfam PF06338 ComK protein 16 94 6.7E-5 T 12-10-2018 IPR010461 Competence protein ComK GO:0030420 Amet_3518 bf438c171b2de857f2fded89cb59a755 455 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 17 435 5.6E-122 T 12-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Amet_3518 bf438c171b2de857f2fded89cb59a755 455 Gene3D G3DSA:3.40.50.1980 17 157 1.1E-153 T 12-10-2018 Amet_3518 bf438c171b2de857f2fded89cb59a755 455 Gene3D G3DSA:3.40.50.1980 9 418 1.1E-153 T 12-10-2018 Amet_3518 bf438c171b2de857f2fded89cb59a755 455 Gene3D G3DSA:1.20.89.10 264 439 1.1E-153 T 12-10-2018 Amet_3518 bf438c171b2de857f2fded89cb59a755 455 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 35 42 - T 12-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Amet_3518 bf438c171b2de857f2fded89cb59a755 455 Gene3D G3DSA:3.40.50.1980 158 425 1.1E-153 T 12-10-2018 Amet_3518 bf438c171b2de857f2fded89cb59a755 455 SUPERFAMILY SSF53807 9 450 9.48E-132 T 12-10-2018 Amet_3284 35498ce609e1a112cf595a38c0b258d5 80 Pfam PF11535 Calcium binding 1 77 9.7E-13 T 12-10-2018 IPR020994 Uncharacterised protein family, calcium binding protein, CcbP Amet_4661 adaf4bd31c7f7c8c42955931619abc2d 137 Pfam PF01814 Hemerythrin HHE cation binding domain 15 127 1.8E-7 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Amet_4661 adaf4bd31c7f7c8c42955931619abc2d 137 SUPERFAMILY SSF47188 2 130 1.31E-28 T 12-10-2018 IPR035938 Hemerythrin-like superfamily Amet_4661 adaf4bd31c7f7c8c42955931619abc2d 137 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 3 131 3.9E-33 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 Amet_4661 adaf4bd31c7f7c8c42955931619abc2d 137 ProSitePatterns PS00550 Hemerythrin family signature. 59 82 - T 12-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 Amet_4661 adaf4bd31c7f7c8c42955931619abc2d 137 Gene3D G3DSA:1.20.120.50 1 136 3.4E-36 T 12-10-2018 IPR035938 Hemerythrin-like superfamily Amet_1891 3dbe53f5803ecdd70318e1ba8c84e322 174 Gene3D G3DSA:1.10.1740.10 4 86 1.7E-18 T 12-10-2018 Amet_1891 3dbe53f5803ecdd70318e1ba8c84e322 174 Gene3D G3DSA:1.10.10.10 110 174 1.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1891 3dbe53f5803ecdd70318e1ba8c84e322 174 SUPERFAMILY SSF88659 108 172 1.68E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_1891 3dbe53f5803ecdd70318e1ba8c84e322 174 Pfam PF04542 Sigma-70 region 2 17 84 3.8E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1891 3dbe53f5803ecdd70318e1ba8c84e322 174 Pfam PF08281 Sigma-70, region 4 118 169 7.1E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_1891 3dbe53f5803ecdd70318e1ba8c84e322 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 173 1.3E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_1891 3dbe53f5803ecdd70318e1ba8c84e322 174 SUPERFAMILY SSF88946 10 88 9.42E-18 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1521 5fcbad82a0f4db48ee786c39fc10de96 406 Gene3D G3DSA:2.40.30.170 54 327 6.6E-71 T 12-10-2018 Amet_1521 5fcbad82a0f4db48ee786c39fc10de96 406 SUPERFAMILY SSF111369 133 324 3.4E-19 T 12-10-2018 Amet_1521 5fcbad82a0f4db48ee786c39fc10de96 406 SUPERFAMILY SSF111369 55 137 7.45E-10 T 12-10-2018 Amet_1521 5fcbad82a0f4db48ee786c39fc10de96 406 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 318 8.6E-30 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Amet_1521 5fcbad82a0f4db48ee786c39fc10de96 406 Gene3D G3DSA:1.10.287.470 99 216 6.6E-71 T 12-10-2018 Amet_1521 5fcbad82a0f4db48ee786c39fc10de96 406 Gene3D G3DSA:2.40.50.100 65 251 6.6E-71 T 12-10-2018 Amet_1521 5fcbad82a0f4db48ee786c39fc10de96 406 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 179 400 2.1E-46 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Amet_1521 5fcbad82a0f4db48ee786c39fc10de96 406 Gene3D G3DSA:2.40.420.20 51 386 6.6E-71 T 12-10-2018 Amet_3083 52efd559c5e3e5d7ebe49be6f1a38150 142 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 9 137 6.0E-16 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 Amet_2041 0dfad037577d2693cb572d6cc8e1b63f 284 SUPERFAMILY SSF51735 2 272 2.48E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2041 0dfad037577d2693cb572d6cc8e1b63f 284 Gene3D G3DSA:3.40.50.720 4 265 2.2E-64 T 12-10-2018 Amet_2041 0dfad037577d2693cb572d6cc8e1b63f 284 Gene3D G3DSA:3.90.25.10 132 266 2.2E-64 T 12-10-2018 Amet_2041 0dfad037577d2693cb572d6cc8e1b63f 284 Pfam PF05368 NmrA-like family 3 217 7.4E-22 T 12-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 SMART SM00342 27 111 2.5E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 Pfam PF12833 Helix-turn-helix domain 33 112 8.1E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 9.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 9.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 SUPERFAMILY SSF46689 11 61 1.7E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 SUPERFAMILY SSF55136 138 290 5.1E-31 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 SUPERFAMILY SSF46689 64 114 2.87E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 Gene3D G3DSA:1.10.10.60 61 117 3.9E-14 T 12-10-2018 Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 Gene3D G3DSA:3.20.80.10 137 291 5.1E-37 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 SMART SM00871 137 291 1.3E-30 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 Pfam PF06445 GyrI-like small molecule binding domain 138 290 2.2E-27 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain Amet_3846 c89f646d1d973dc102b5a2b6ee66a26f 291 Gene3D G3DSA:1.10.10.60 1 60 3.4E-16 T 12-10-2018 Amet_4520 ea966c8578f715102e26eff442320e9a 784 Gene3D G3DSA:3.30.1620.10 244 351 5.8E-182 T 12-10-2018 Amet_4520 ea966c8578f715102e26eff442320e9a 784 Pfam PF02867 Ribonucleotide reductase, barrel domain 313 563 6.7E-10 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Amet_4520 ea966c8578f715102e26eff442320e9a 784 Pfam PF03477 ATP cone domain 3 90 3.0E-20 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Amet_4520 ea966c8578f715102e26eff442320e9a 784 TIGRFAM TIGR02505 RTPR: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 119 784 1.0E-113 T 12-10-2018 IPR013345 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0006260|GO:0008998|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 Amet_4520 ea966c8578f715102e26eff442320e9a 784 SUPERFAMILY SSF51998 115 751 1.1E-129 T 12-10-2018 Amet_4520 ea966c8578f715102e26eff442320e9a 784 Gene3D G3DSA:3.20.70.20 108 733 5.8E-182 T 12-10-2018 Amet_4520 ea966c8578f715102e26eff442320e9a 784 Gene3D G3DSA:3.90.1390.10 615 752 5.8E-182 T 12-10-2018 Amet_2984 9f692bc65127d65a00b3f7204d66c581 606 SUPERFAMILY SSF52540 230 322 6.21E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2984 9f692bc65127d65a00b3f7204d66c581 606 Gene3D G3DSA:3.40.50.300 227 335 3.8E-6 T 12-10-2018 Amet_2984 9f692bc65127d65a00b3f7204d66c581 606 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 229 587 1.1E-76 T 12-10-2018 IPR018647 Domain of unknown function DUF2075 Amet_2377 6d86b9029ca819a3a6b8074a0c142b49 529 SUPERFAMILY SSF53041 1 150 4.97E-38 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_2377 6d86b9029ca819a3a6b8074a0c142b49 529 Gene3D G3DSA:3.40.50.1390 1 157 3.8E-47 T 12-10-2018 Amet_2377 6d86b9029ca819a3a6b8074a0c142b49 529 Pfam PF07508 Recombinase 184 315 2.3E-21 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_2377 6d86b9029ca819a3a6b8074a0c142b49 529 Pfam PF00239 Resolvase, N terminal domain 3 150 1.9E-39 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_2377 6d86b9029ca819a3a6b8074a0c142b49 529 SMART SM00857 3 150 1.2E-57 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_2377 6d86b9029ca819a3a6b8074a0c142b49 529 Pfam PF13408 Recombinase zinc beta ribbon domain 329 393 3.4E-12 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 Pfam PF01807 CHC2 zinc finger 6 100 2.2E-38 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 Gene3D G3DSA:3.90.980.10 113 240 7.6E-46 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 Gene3D G3DSA:3.40.1360.10 241 363 7.1E-41 T 12-10-2018 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 SUPERFAMILY SSF56731 117 421 6.41E-103 T 12-10-2018 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 Pfam PF13155 Toprim-like 261 346 1.8E-19 T 12-10-2018 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 Pfam PF10410 DnaB-helicase binding domain of primase 365 420 5.3E-13 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 251 4.4E-41 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 TIGRFAM TIGR01391 dnaG: DNA primase 6 414 2.3E-148 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 SMART SM00400 36 90 1.7E-36 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 Gene3D G3DSA:3.90.580.10 1 103 4.5E-40 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 PIRSF PIRSF002811 3 605 2.5E-170 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 SUPERFAMILY SSF57783 5 100 3.74E-37 T 12-10-2018 Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 SMART SM00493 258 329 5.9E-19 T 12-10-2018 IPR006171 TOPRIM domain Amet_2994 eb214c3b621f3717199fbbbbaf0aa4c8 611 Hamap MF_00974 DNA primase [dnaG]. 4 597 28.637 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Amet_4290 1db67fec5be8a010088f8f30976dd592 357 Pfam PF08388 Group II intron, maturase-specific domain 227 305 6.0E-24 T 12-10-2018 IPR013597 Group II intron, maturase-specific Amet_4290 1db67fec5be8a010088f8f30976dd592 357 SUPERFAMILY SSF56672 2 296 3.91E-40 T 12-10-2018 Amet_4290 1db67fec5be8a010088f8f30976dd592 357 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 3 210 1.6E-39 T 12-10-2018 IPR000477 Reverse transcriptase domain Amet_4545 64a6cae47a7ec92dca9be64aa003305e 299 Pfam PF00069 Protein kinase domain 19 225 1.0E-17 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amet_4545 64a6cae47a7ec92dca9be64aa003305e 299 SUPERFAMILY SSF56112 16 226 9.17E-26 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Amet_4545 64a6cae47a7ec92dca9be64aa003305e 299 Gene3D G3DSA:1.10.510.10 4 278 4.1E-22 T 12-10-2018 Amet_4545 64a6cae47a7ec92dca9be64aa003305e 299 SMART SM00220 19 247 3.8E-7 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amet_3603 249dd4fa6623656a871a0bebecc5801f 415 PIRSF PIRSF033563 1 415 2.0E-148 T 12-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 Amet_3603 249dd4fa6623656a871a0bebecc5801f 415 Pfam PF06245 Protein of unknown function (DUF1015) 4 412 5.1E-138 T 12-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 Amet_4564 4747d09b4d1123fed8509e361aad2988 267 SUPERFAMILY SSF51905 94 180 5.61E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_4564 4747d09b4d1123fed8509e361aad2988 267 Pfam PF13478 XdhC Rossmann domain 106 249 2.9E-39 T 12-10-2018 IPR027051 XdhC Rossmann domain Amet_4564 4747d09b4d1123fed8509e361aad2988 267 Gene3D G3DSA:3.40.50.720 105 265 2.8E-45 T 12-10-2018 Amet_4564 4747d09b4d1123fed8509e361aad2988 267 Pfam PF02625 XdhC and CoxI family 14 76 2.9E-15 T 12-10-2018 IPR003777 XdhC- CoxI Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 Gene3D G3DSA:1.10.268.10 364 453 1.8E-148 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 SUPERFAMILY SSF101904 495 687 2.88E-39 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 466 1.7E-129 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 SMART SM00434 11 459 7.3E-125 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 544 565 8.1 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 859 896 1.3 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 503 523 0.67 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 Gene3D G3DSA:2.120.10.90 495 705 3.8E-31 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 Gene3D G3DSA:2.120.10.90 708 913 1.6E-23 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 SUPERFAMILY SSF56719 6 483 6.8E-121 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 Gene3D G3DSA:3.90.199.10 32 479 1.8E-148 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 SUPERFAMILY SSF101904 711 910 5.89E-30 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Amet_3106 4eca59d09b33320b6b1ae54981d8426c 930 Gene3D G3DSA:3.30.1360.40 234 327 1.8E-148 T 12-10-2018 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 321 417 1.4E-16 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 Gene3D G3DSA:3.40.50.720 161 311 2.4E-39 T 12-10-2018 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 Gene3D G3DSA:3.30.460.30 1 158 3.4E-44 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 156 7.7E-39 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 175 305 2.0E-35 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 SUPERFAMILY SSF69742 1 158 3.92E-39 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 PIRSF PIRSF000445 1 424 6.1E-131 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 415 1.5E-114 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 SUPERFAMILY SSF69075 324 413 1.83E-12 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 415 26.194 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Amet_0058 691e40ce18de1b3b61e4e194c2ac7432 424 SUPERFAMILY SSF51735 163 312 1.48E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0897 9acf65b4f04b63c43b459cfcd5e053ae 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 279 3.5E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_0897 9acf65b4f04b63c43b459cfcd5e053ae 294 Gene3D G3DSA:1.10.3720.10 47 285 2.7E-72 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0897 9acf65b4f04b63c43b459cfcd5e053ae 294 SUPERFAMILY SSF161098 51 277 2.62E-62 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0897 9acf65b4f04b63c43b459cfcd5e053ae 294 SUPERFAMILY SSF160964 6 41 6.54E-5 T 12-10-2018 Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 152 710 9.4E-136 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 Gene3D G3DSA:3.30.365.10 452 625 2.0E-96 T 12-10-2018 Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 Gene3D G3DSA:3.30.365.10 191 286 6.3E-64 T 12-10-2018 Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 Gene3D G3DSA:3.30.365.10 127 355 6.3E-64 T 12-10-2018 Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 Gene3D G3DSA:3.90.1170.50 2 122 2.0E-37 T 12-10-2018 Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 SUPERFAMILY SSF56003 115 767 5.23E-160 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 19 122 8.2E-28 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 SUPERFAMILY SSF54665 4 142 1.01E-40 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 SMART SM01008 19 122 2.0E-44 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_3344 d1be941388de4e1c258e81968fb7d3ff 775 Gene3D G3DSA:3.30.365.10 373 765 2.0E-96 T 12-10-2018 Amet_1226 cd03bb9c4d7ded9888024f579b0b8db8 272 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 9 256 9.9E-100 T 12-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 Amet_1226 cd03bb9c4d7ded9888024f579b0b8db8 272 Pfam PF03575 Peptidase family S51 9 210 2.5E-27 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Amet_1226 cd03bb9c4d7ded9888024f579b0b8db8 272 PIRSF PIRSF032067 2 268 6.1E-72 T 12-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 Amet_1226 cd03bb9c4d7ded9888024f579b0b8db8 272 SUPERFAMILY SSF52317 9 223 1.18E-29 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_1226 cd03bb9c4d7ded9888024f579b0b8db8 272 Gene3D G3DSA:3.40.50.880 6 269 3.1E-79 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 Pfam PF01336 OB-fold nucleic acid binding domain 997 1074 1.2E-6 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 Gene3D G3DSA:3.20.20.140 1 274 1.2E-118 T 12-10-2018 Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 Gene3D G3DSA:1.10.150.870 774 879 7.3E-8 T 12-10-2018 Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 Gene3D G3DSA:1.10.10.1600 428 505 2.6E-28 T 12-10-2018 Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 SUPERFAMILY SSF89550 3 267 1.04E-43 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 296 713 4.5E-178 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 Pfam PF02811 PHP domain 5 177 7.2E-55 T 12-10-2018 IPR004013 PHP domain GO:0003824 Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 SMART SM00481 4 71 1.8E-33 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 Pfam PF14579 Helix-hairpin-helix motif 802 891 3.0E-26 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_4071 9038766d044cfcc6af25305cf7a2f4e5 1155 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 1034 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_1328 243a9d88c9387d3e7629fba5319c8b2b 302 SUPERFAMILY SSF53850 59 258 1.25E-41 T 12-10-2018 Amet_1328 243a9d88c9387d3e7629fba5319c8b2b 302 Gene3D G3DSA:3.40.190.10 45 269 9.8E-69 T 12-10-2018 Amet_1328 243a9d88c9387d3e7629fba5319c8b2b 302 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 266 2.4E-64 T 12-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 Amet_1328 243a9d88c9387d3e7629fba5319c8b2b 302 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 45 289 8.2E-69 T 12-10-2018 Amet_1328 243a9d88c9387d3e7629fba5319c8b2b 302 Gene3D G3DSA:3.40.190.10 127 242 9.8E-69 T 12-10-2018 Amet_4436 f5bc391332e3a35ca28ae67862eabe64 185 Pfam PF06177 QueT transporter 38 181 1.7E-26 T 12-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 Amet_4243 8c8faf4325c2e4c8ce86826b72a64395 451 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 6 362 4.8E-133 T 12-10-2018 IPR010839 Acyclic terpene utilisation Amet_1878 364841be448d71c71d6c2dcc068a2792 320 Gene3D G3DSA:1.10.3720.10 107 319 7.6E-27 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1878 364841be448d71c71d6c2dcc068a2792 320 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 75 1.9E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amet_1878 364841be448d71c71d6c2dcc068a2792 320 SUPERFAMILY SSF161098 113 303 3.92E-34 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1878 364841be448d71c71d6c2dcc068a2792 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 137 319 3.2E-37 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_4026 67106cba24c96bbae09fc6d7dee762c5 102 Pfam PF05135 Phage gp6-like head-tail connector protein 1 72 2.4E-12 T 12-10-2018 IPR021146 Phage gp6-like head-tail connector protein Amet_4026 67106cba24c96bbae09fc6d7dee762c5 102 Gene3D G3DSA:1.10.3230.30 1 101 1.0E-12 T 12-10-2018 Amet_4026 67106cba24c96bbae09fc6d7dee762c5 102 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 4 75 3.1E-7 T 12-10-2018 IPR006450 Phage protein of unkonwn function Amet_0913 eab099c487b42482307357d8dcc86e1c 261 Gene3D G3DSA:1.20.120.350 11 133 2.1E-24 T 12-10-2018 IPR027359 Voltage-dependent channel domain superfamily Amet_0913 eab099c487b42482307357d8dcc86e1c 261 SUPERFAMILY SSF81324 12 213 6.93E-42 T 12-10-2018 Amet_0913 eab099c487b42482307357d8dcc86e1c 261 Gene3D G3DSA:1.10.287.70 134 228 2.1E-20 T 12-10-2018 Amet_0913 eab099c487b42482307357d8dcc86e1c 261 Pfam PF07885 Ion channel 143 213 3.9E-16 T 12-10-2018 IPR013099 Potassium channel domain Amet_0913 eab099c487b42482307357d8dcc86e1c 261 PRINTS PR00169 Potassium channel signature 158 180 1.0E-9 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Amet_0913 eab099c487b42482307357d8dcc86e1c 261 PRINTS PR00169 Potassium channel signature 48 71 1.0E-9 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Amet_0913 eab099c487b42482307357d8dcc86e1c 261 PRINTS PR00169 Potassium channel signature 187 213 1.0E-9 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Amet_3236 a247b0a4691d4c5cc43eaa975adc4e33 178 Pfam PF03773 Predicted permease 36 171 9.9E-16 T 12-10-2018 IPR005524 Predicted permease DUF318 Amet_2804 eb246442577fa94afccc1a26452ffef3 231 Pfam PF01168 Alanine racemase, N-terminal domain 12 227 2.3E-24 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_2804 eb246442577fa94afccc1a26452ffef3 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 227 2.9E-59 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Amet_2804 eb246442577fa94afccc1a26452ffef3 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 226 29.178 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Amet_2804 eb246442577fa94afccc1a26452ffef3 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 74 88 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Amet_2804 eb246442577fa94afccc1a26452ffef3 231 SUPERFAMILY SSF51419 2 225 1.7E-73 T 12-10-2018 IPR029066 PLP-binding barrel Amet_2804 eb246442577fa94afccc1a26452ffef3 231 Gene3D G3DSA:3.20.20.10 1 231 1.8E-81 T 12-10-2018 IPR029066 PLP-binding barrel Amet_2804 eb246442577fa94afccc1a26452ffef3 231 PIRSF PIRSF004848 1 231 8.3E-79 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 SUPERFAMILY SSF53850 348 828 3.44E-105 T 12-10-2018 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 Gene3D G3DSA:3.40.190.10 509 817 8.3E-108 T 12-10-2018 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 Gene3D G3DSA:1.10.287.950 30 338 5.1E-60 T 12-10-2018 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 389 748 9.0E-64 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 SUPERFAMILY SSF58104 50 334 1.83E-62 T 12-10-2018 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 109 290 1.3E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 Gene3D G3DSA:3.90.76.10 361 508 8.3E-108 T 12-10-2018 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 Gene3D G3DSA:3.10.105.10 588 804 8.3E-108 T 12-10-2018 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 219 1.1E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 77 106 1.1E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_1715 54bfd483dfc6e5403ec4dd637e14f3e1 830 SMART SM00283 49 324 1.5E-63 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 Gene3D G3DSA:1.20.120.1810 5 109 1.5E-27 T 12-10-2018 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 Pfam PF04545 Sigma-70, region 4 206 255 7.5E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 Pfam PF04539 Sigma-70 region 3 122 176 4.1E-8 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 PRINTS PR00046 Major sigma-70 factor signature 242 253 2.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 PRINTS PR00046 Major sigma-70 factor signature 210 222 2.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 PRINTS PR00046 Major sigma-70 factor signature 227 242 2.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 PRINTS PR00046 Major sigma-70 factor signature 90 98 2.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 PRINTS PR00046 Major sigma-70 factor signature 66 79 2.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 256 5.6E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 SUPERFAMILY SSF88946 5 110 5.63E-34 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 SUPERFAMILY SSF88659 114 190 9.16E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2870 b18562e295c58e64554dfafe2778eafb 257 PIRSF PIRSF000770 124 157 7.3 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 PIRSF PIRSF000770 158 257 1.3E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 PIRSF PIRSF000770 16 137 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 Pfam PF04542 Sigma-70 region 2 42 111 1.7E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 Gene3D G3DSA:1.10.10.10 110 164 1.1E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2870 b18562e295c58e64554dfafe2778eafb 257 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 257 4.8E-147 T 12-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 Gene3D G3DSA:1.10.10.10 185 257 1.8E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2870 b18562e295c58e64554dfafe2778eafb 257 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 36 256 1.0E-82 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 227 253 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2870 b18562e295c58e64554dfafe2778eafb 257 SUPERFAMILY SSF88659 175 256 4.49E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_4134 aad1d798727d55067b2707acc53c5599 341 SUPERFAMILY SSF54106 150 195 6.93E-10 T 12-10-2018 Amet_4134 aad1d798727d55067b2707acc53c5599 341 Gene3D G3DSA:3.10.350.10 83 135 1.9E-16 T 12-10-2018 IPR036779 LysM domain superfamily Amet_4134 aad1d798727d55067b2707acc53c5599 341 Gene3D G3DSA:3.10.350.10 20 82 6.0E-14 T 12-10-2018 IPR036779 LysM domain superfamily Amet_4134 aad1d798727d55067b2707acc53c5599 341 SMART SM00257 32 77 9.8E-8 T 12-10-2018 IPR018392 LysM domain Amet_4134 aad1d798727d55067b2707acc53c5599 341 SMART SM00257 84 128 8.4E-15 T 12-10-2018 IPR018392 LysM domain Amet_4134 aad1d798727d55067b2707acc53c5599 341 SMART SM00257 151 195 2.2E-11 T 12-10-2018 IPR018392 LysM domain Amet_4134 aad1d798727d55067b2707acc53c5599 341 SUPERFAMILY SSF54106 84 128 3.79E-11 T 12-10-2018 Amet_4134 aad1d798727d55067b2707acc53c5599 341 SUPERFAMILY SSF54106 31 77 3.4E-8 T 12-10-2018 Amet_4134 aad1d798727d55067b2707acc53c5599 341 Pfam PF01476 LysM domain 152 195 1.0E-9 T 12-10-2018 IPR018392 LysM domain Amet_4134 aad1d798727d55067b2707acc53c5599 341 Pfam PF01476 LysM domain 33 77 4.6E-10 T 12-10-2018 IPR018392 LysM domain Amet_4134 aad1d798727d55067b2707acc53c5599 341 Pfam PF01476 LysM domain 85 128 1.1E-15 T 12-10-2018 IPR018392 LysM domain Amet_4134 aad1d798727d55067b2707acc53c5599 341 Gene3D G3DSA:3.10.350.10 140 204 9.9E-15 T 12-10-2018 IPR036779 LysM domain superfamily Amet_4113 8e00925ef8a284b1c553b69813cca82c 212 SMART SM01120 34 208 9.7E-62 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amet_4113 8e00925ef8a284b1c553b69813cca82c 212 Gene3D G3DSA:1.25.40.340 3 210 4.2E-58 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amet_4113 8e00925ef8a284b1c553b69813cca82c 212 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 12 207 2.2E-57 T 12-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 Amet_4113 8e00925ef8a284b1c553b69813cca82c 212 SUPERFAMILY SSF101473 5 210 1.18E-50 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amet_4113 8e00925ef8a284b1c553b69813cca82c 212 Pfam PF02734 DAK2 domain 35 207 2.1E-50 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amet_1331 3c0910375cb9de073d0beb32aa89a55f 177 Gene3D G3DSA:3.30.70.20 1 159 3.7E-43 T 12-10-2018 Amet_1331 3c0910375cb9de073d0beb32aa89a55f 177 Pfam PF12800 4Fe-4S binding domain 2 16 0.0043 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_1331 3c0910375cb9de073d0beb32aa89a55f 177 Pfam PF13247 4Fe-4S dicluster domain 43 138 1.4E-20 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_1331 3c0910375cb9de073d0beb32aa89a55f 177 SUPERFAMILY SSF54862 2 167 3.35E-54 T 12-10-2018 Amet_1331 3c0910375cb9de073d0beb32aa89a55f 177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0270 8d785bf7556b6edeaf947d849258317f 184 SUPERFAMILY SSF46689 3 59 5.99E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0270 8d785bf7556b6edeaf947d849258317f 184 Gene3D G3DSA:1.10.357.10 1 183 2.8E-47 T 12-10-2018 Amet_0270 8d785bf7556b6edeaf947d849258317f 184 Pfam PF14278 Transcriptional regulator C-terminal region 77 152 2.8E-8 T 12-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type Amet_4015 f087bce0f128f21692d1ead55b8b2984 229 SUPERFAMILY SSF110997 186 227 3.14E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Amet_4015 f087bce0f128f21692d1ead55b8b2984 229 SMART SM00644 11 164 1.1E-4 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amet_4015 f087bce0f128f21692d1ead55b8b2984 229 Gene3D G3DSA:3.40.80.10 1 194 2.0E-49 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amet_4015 f087bce0f128f21692d1ead55b8b2984 229 SUPERFAMILY SSF55846 3 183 5.5E-36 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amet_4015 f087bce0f128f21692d1ead55b8b2984 229 Pfam PF05036 Sporulation related domain 187 226 7.9E-7 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 Amet_4015 f087bce0f128f21692d1ead55b8b2984 229 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 21 163 4.7E-18 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Amet_0099 b8798073c76f2adbe660139cd97557f5 123 Pfam PF09683 Bacteriocin (Lactococcin_972) 60 120 7.0E-20 T 12-10-2018 IPR006540 Bacteriocin, lactococcin 972 Amet_0099 b8798073c76f2adbe660139cd97557f5 123 TIGRFAM TIGR01653 lactococcin_972: bacteriocin, lactococcin 972 family 10 118 5.4E-11 T 12-10-2018 IPR006540 Bacteriocin, lactococcin 972 Amet_0099 b8798073c76f2adbe660139cd97557f5 123 Gene3D G3DSA:2.60.40.2850 61 123 2.1E-13 T 12-10-2018 Amet_1014 1709aa2167f9aa637b36aec5ff38ea39 231 Pfam PF00072 Response regulator receiver domain 6 119 7.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1014 1709aa2167f9aa637b36aec5ff38ea39 231 SUPERFAMILY SSF52172 2 130 4.55E-40 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1014 1709aa2167f9aa637b36aec5ff38ea39 231 SMART SM00862 154 228 2.0E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1014 1709aa2167f9aa637b36aec5ff38ea39 231 SUPERFAMILY SSF46894 132 228 1.53E-28 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_1014 1709aa2167f9aa637b36aec5ff38ea39 231 SMART SM00448 4 118 1.1E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1014 1709aa2167f9aa637b36aec5ff38ea39 231 Gene3D G3DSA:3.40.50.2300 1 134 4.5E-37 T 12-10-2018 Amet_1014 1709aa2167f9aa637b36aec5ff38ea39 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 228 2.2E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1014 1709aa2167f9aa637b36aec5ff38ea39 231 Gene3D G3DSA:1.10.10.10 135 231 9.2E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2935 2d7e3c6f978be6547a991f8187fd4612 340 Pfam PF03572 Peptidase family S41 161 286 3.9E-21 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Amet_2935 2d7e3c6f978be6547a991f8187fd4612 340 SMART SM00245 137 313 2.6E-6 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Amet_2935 2d7e3c6f978be6547a991f8187fd4612 340 Gene3D G3DSA:3.90.226.10 143 314 2.9E-27 T 12-10-2018 Amet_2935 2d7e3c6f978be6547a991f8187fd4612 340 SUPERFAMILY SSF52096 84 309 3.48E-32 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_4132 2853f37a83b1a97c210273d05fdf60bf 192 Gene3D G3DSA:3.40.50.10420 1 190 1.2E-60 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Amet_4132 2853f37a83b1a97c210273d05fdf60bf 192 SUPERFAMILY SSF100950 1 188 1.53E-50 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_4132 2853f37a83b1a97c210273d05fdf60bf 192 PIRSF PIRSF006806 1 185 6.7E-51 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Amet_4132 2853f37a83b1a97c210273d05fdf60bf 192 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 182 3.0E-46 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Amet_4132 2853f37a83b1a97c210273d05fdf60bf 192 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 182 8.1E-55 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 SUPERFAMILY SSF52283 1 132 1.13E-34 T 12-10-2018 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 142 169 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 Gene3D G3DSA:3.40.50.720 92 282 5.3E-113 T 12-10-2018 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 Gene3D G3DSA:3.30.1330.90 319 451 4.6E-41 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 2 526 2.1E-204 T 12-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 SUPERFAMILY SSF55021 442 524 4.58E-17 T 12-10-2018 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 Pfam PF01842 ACT domain 455 516 5.6E-10 T 12-10-2018 IPR002912 ACT domain Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 SUPERFAMILY SSF143548 319 448 4.45E-36 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 Gene3D G3DSA:3.30.70.260 453 526 6.3E-23 T 12-10-2018 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 Gene3D G3DSA:3.40.50.720 3 291 5.3E-113 T 12-10-2018 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 312 1.8E-36 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 280 1.3E-57 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amet_4275 b38e913adb72a4d7c722dc736ed16a97 526 SUPERFAMILY SSF51735 99 281 1.02E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0169 1c7d7801960f2c96e2b404b80f81f830 96 Gene3D G3DSA:2.60.40.2000 20 77 7.7E-20 T 12-10-2018 IPR038705 YabP superfamily Amet_0169 1c7d7801960f2c96e2b404b80f81f830 96 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 12 80 2.0E-13 T 12-10-2018 IPR012504 Sporulation protein YabP Amet_0169 1c7d7801960f2c96e2b404b80f81f830 96 Pfam PF07873 YabP family 12 77 4.6E-19 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC Amet_0169 1c7d7801960f2c96e2b404b80f81f830 96 PIRSF PIRSF011576 1 96 2.5E-21 T 12-10-2018 IPR012504 Sporulation protein YabP Amet_0169 1c7d7801960f2c96e2b404b80f81f830 96 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 12 96 1.2E-25 T 12-10-2018 IPR012504 Sporulation protein YabP Amet_3634 c6fa14a1105821167714d1b38a2317ec 395 Pfam PF00155 Aminotransferase class I and II 42 384 1.1E-67 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_3634 c6fa14a1105821167714d1b38a2317ec 395 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 9.0E-135 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Amet_3634 c6fa14a1105821167714d1b38a2317ec 395 SUPERFAMILY SSF53383 7 393 1.1E-120 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3634 c6fa14a1105821167714d1b38a2317ec 395 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 10 395 1.8E-183 T 12-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type Amet_3634 c6fa14a1105821167714d1b38a2317ec 395 Gene3D G3DSA:3.90.1150.10 38 386 1.3E-146 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3634 c6fa14a1105821167714d1b38a2317ec 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Amet_3634 c6fa14a1105821167714d1b38a2317ec 395 Gene3D G3DSA:3.40.640.10 58 293 1.3E-146 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 Pfam PF07833 Copper amine oxidase N-terminal domain 60 158 1.4E-28 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 SUPERFAMILY SSF53187 534 715 1.26E-57 T 12-10-2018 Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 536 712 1.6E-57 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 Gene3D G3DSA:3.30.457.10 65 145 2.5E-16 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 SUPERFAMILY SSF55383 63 153 1.44E-20 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 Pfam PF11741 AMIN domain 315 418 3.2E-9 T 12-10-2018 IPR021731 AMIN domain Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 Pfam PF11741 AMIN domain 206 301 1.4E-16 T 12-10-2018 IPR021731 AMIN domain Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 SMART SM00646 596 712 1.7E-42 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 Gene3D G3DSA:2.60.40.3500 183 308 2.6E-17 T 12-10-2018 Amet_0953 f9c61572e1cd4870fe567ddbb18e8b1d 719 Gene3D G3DSA:3.40.630.40 524 719 8.5E-65 T 12-10-2018 Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 Pfam PF07729 FCD domain 98 225 4.8E-26 T 12-10-2018 IPR011711 GntR, C-terminal Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 SUPERFAMILY SSF48008 96 232 2.88E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 SMART SM00895 98 226 2.3E-20 T 12-10-2018 IPR011711 GntR, C-terminal Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 Gene3D G3DSA:1.10.10.10 6 76 1.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 4.3E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 Gene3D G3DSA:1.20.120.530 79 232 1.9E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 SMART SM00345 14 73 9.7E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_0818 c562c41f9fe0210bbf890c6803cc0725 237 SUPERFAMILY SSF46785 1 76 9.09E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4334 0c65f513cbc799a592f5c547fbc8155f 224 Pfam PF04239 Protein of unknown function (DUF421) 86 201 2.9E-34 T 12-10-2018 IPR007353 Protein of unknown function DUF421 Amet_4334 0c65f513cbc799a592f5c547fbc8155f 224 Gene3D G3DSA:3.30.240.20 165 224 6.5E-17 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Amet_4334 0c65f513cbc799a592f5c547fbc8155f 224 Gene3D G3DSA:3.30.240.20 78 150 2.0E-25 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Amet_3705 f3b43168db83f5f2dadec0b8f9978b5f 259 Pfam PF01184 GPR1/FUN34/yaaH family 43 221 1.4E-4 T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 Gene3D G3DSA:3.90.1170.30 329 418 4.5E-146 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 108 123 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 64 1.1E-20 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 343 416 1.2E-23 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 PIRSF PIRSF000478 1 432 4.9E-159 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 SMART SM00941 343 417 1.6E-31 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 Gene3D G3DSA:1.20.970.10 1 65 1.7E-27 T 12-10-2018 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 Gene3D G3DSA:3.40.1030.10 75 328 4.5E-146 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 SUPERFAMILY SSF47648 1 67 6.93E-21 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 SUPERFAMILY SSF54680 333 431 1.31E-26 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 1 417 1.2E-172 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 Pfam PF00591 Glycosyl transferase family, a/b domain 76 304 9.2E-42 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_2527 0e16e26d3b72a1e009ec82050f804baf 439 SUPERFAMILY SSF52418 67 326 1.44E-91 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_0462 e161bb7a909d7e25bb64f18205e3a47b 327 SUPERFAMILY SSF53474 7 316 1.3E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_0462 e161bb7a909d7e25bb64f18205e3a47b 327 Pfam PF12146 Serine aminopeptidase, S33 36 296 5.4E-57 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 Amet_0462 e161bb7a909d7e25bb64f18205e3a47b 327 Gene3D G3DSA:3.40.50.1820 7 319 1.2E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_4568 f6b8cb2e58452e55e718739d631d43ef 325 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 2 264 3.1E-73 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amet_4568 f6b8cb2e58452e55e718739d631d43ef 325 Gene3D G3DSA:3.30.365.20 1 325 4.3E-104 T 12-10-2018 Amet_4568 f6b8cb2e58452e55e718739d631d43ef 325 SUPERFAMILY SSF56003 3 324 3.27E-95 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Gene3D G3DSA:3.30.450.20 387 500 1.0E-18 T 12-10-2018 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Pfam PF00512 His Kinase A (phospho-acceptor) domain 528 599 7.2E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Gene3D G3DSA:3.30.565.10 603 767 8.4E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SUPERFAMILY SSF55785 142 252 1.22E-23 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Gene3D G3DSA:3.30.450.20 122 261 1.5E-26 T 12-10-2018 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SUPERFAMILY SSF55785 246 373 5.48E-23 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SUPERFAMILY SSF55785 372 499 1.39E-18 T 12-10-2018 IPR035965 PAS domain superfamily Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Gene3D G3DSA:3.30.450.20 262 386 1.9E-24 T 12-10-2018 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Gene3D G3DSA:1.10.287.130 509 600 1.1E-22 T 12-10-2018 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 646 754 4.5E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SUPERFAMILY SSF47384 515 599 1.08E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SUPERFAMILY SSF55874 588 759 1.44E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SMART SM00086 461 501 160.0 T 12-10-2018 IPR001610 PAC motif Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SMART SM00086 207 249 3.4E-8 T 12-10-2018 IPR001610 PAC motif Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SMART SM00086 333 375 0.03 T 12-10-2018 IPR001610 PAC motif Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 710 1.1E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 PRINTS PR00344 Bacterial sensor protein C-terminal signature 717 735 1.1E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 696 1.1E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 754 1.1E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Pfam PF13188 PAS domain 387 431 6.8E-9 T 12-10-2018 IPR000014 PAS domain Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 256 2.0E-26 T 12-10-2018 IPR000014 PAS domain Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 380 2.7E-21 T 12-10-2018 IPR000014 PAS domain Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 384 505 5.3E-21 T 12-10-2018 IPR000014 PAS domain Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SMART SM00387 645 757 3.4E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SMART SM00388 527 599 3.1E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Pfam PF08447 PAS fold 159 241 9.2E-13 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 Pfam PF08447 PAS fold 285 361 1.4E-9 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SMART SM00091 387 453 1.5E-7 T 12-10-2018 IPR000014 PAS domain Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SMART SM00091 134 200 3.4E-6 T 12-10-2018 IPR000014 PAS domain Amet_4407 286f56efafae3bd3b69df9d46cf295cd 790 SMART SM00091 261 327 2.2E-7 T 12-10-2018 IPR000014 PAS domain Amet_3456 367db3a2c2c7ceaffa4f9d7a9c1d6ec2 171 TIGRFAM TIGR02084 leud: 3-isopropylmalate dehydratase, small subunit 6 161 1.9E-79 T 12-10-2018 IPR011824 Hydrolyase LeuD/DmdB, bacterial GO:0016836 KEGG: 00290+4.2.1.33 Amet_3456 367db3a2c2c7ceaffa4f9d7a9c1d6ec2 171 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 4 164 38.04 T 12-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Amet_3456 367db3a2c2c7ceaffa4f9d7a9c1d6ec2 171 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 6 161 1.1E-62 T 12-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Amet_3456 367db3a2c2c7ceaffa4f9d7a9c1d6ec2 171 Gene3D G3DSA:3.20.19.10 2 169 1.6E-58 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Amet_3456 367db3a2c2c7ceaffa4f9d7a9c1d6ec2 171 SUPERFAMILY SSF52016 4 164 1.63E-51 T 12-10-2018 Amet_3456 367db3a2c2c7ceaffa4f9d7a9c1d6ec2 171 Pfam PF00694 Aconitase C-terminal domain 48 106 5.2E-20 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Amet_2237 08b49c1ef470a4f6cd4342961e0dfaa4 354 SUPERFAMILY SSF56349 89 339 1.59E-53 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_2237 08b49c1ef470a4f6cd4342961e0dfaa4 354 Gene3D G3DSA:1.10.443.10 170 350 8.4E-53 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_2237 08b49c1ef470a4f6cd4342961e0dfaa4 354 Gene3D G3DSA:1.10.150.130 78 163 2.7E-21 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Amet_2237 08b49c1ef470a4f6cd4342961e0dfaa4 354 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 81 160 3.5E-16 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amet_2237 08b49c1ef470a4f6cd4342961e0dfaa4 354 Pfam PF00589 Phage integrase family 179 338 9.6E-42 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_1124 9ff5f61abdc5e556a4520c7dec63527f 117 SMART SM01078 2 96 1.1E-43 T 12-10-2018 IPR014925 Uncharacterised domain CGGC-dom Amet_1124 9ff5f61abdc5e556a4520c7dec63527f 117 Pfam PF08821 CGGC domain 2 96 3.7E-18 T 12-10-2018 IPR014925 Uncharacterised domain CGGC-dom Amet_0558 d0db804b5c1f0081e18c6ca130dcf3a0 355 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 56 333 2.8E-56 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Amet_0558 d0db804b5c1f0081e18c6ca130dcf3a0 355 Gene3D G3DSA:3.40.190.170 50 354 7.2E-80 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Amet_0308 bc0e6eec51412b192a8244688c7b959d 248 Pfam PF09359 VTC domain 7 234 1.1E-43 T 12-10-2018 IPR018966 VTC domain Amet_0308 bc0e6eec51412b192a8244688c7b959d 248 Gene3D G3DSA:2.40.320.20 2 244 6.1E-15 T 12-10-2018 Amet_4488 0c8ef7181b630d5a8f12d7244f4eb880 166 SUPERFAMILY SSF160369 5 160 5.23E-54 T 12-10-2018 Amet_4488 0c8ef7181b630d5a8f12d7244f4eb880 166 Gene3D G3DSA:3.30.70.1730 5 133 7.4E-43 T 12-10-2018 Amet_4488 0c8ef7181b630d5a8f12d7244f4eb880 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 27.186 T 12-10-2018 IPR022973 Ribosomal protein L10 Amet_4488 0c8ef7181b630d5a8f12d7244f4eb880 166 Pfam PF00466 Ribosomal protein L10 6 101 6.9E-30 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Amet_3623 988e5fa69614092eb0f138f9512a170f 187 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 7 185 6.0E-62 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Amet_3623 988e5fa69614092eb0f138f9512a170f 187 Gene3D G3DSA:3.40.50.300 6 187 1.3E-61 T 12-10-2018 Amet_3623 988e5fa69614092eb0f138f9512a170f 187 PIRSF PIRSF006135 5 187 1.5E-58 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Amet_3623 988e5fa69614092eb0f138f9512a170f 187 SUPERFAMILY SSF52540 6 187 3.4E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2964 28316a414f79b837c6ae880c61cb320f 438 PIRSF PIRSF005348 1 438 2.8E-176 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 Amet_2964 28316a414f79b837c6ae880c61cb320f 438 Pfam PF03390 2-hydroxycarboxylate transporter family 20 432 3.1E-162 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 Amet_1698 b7316450837e61bbb67271b94e91ae74 168 Gene3D G3DSA:3.40.630.30 1 166 3.6E-46 T 12-10-2018 Amet_1698 b7316450837e61bbb67271b94e91ae74 168 SUPERFAMILY SSF55729 4 164 1.66E-34 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1698 b7316450837e61bbb67271b94e91ae74 168 Pfam PF13420 Acetyltransferase (GNAT) domain 5 156 6.5E-21 T 12-10-2018 Amet_2351 aa39f457d76ecbbe326759a5bf8c317d 841 Gene3D G3DSA:3.10.310.30 322 445 1.4E-38 T 12-10-2018 Amet_2351 aa39f457d76ecbbe326759a5bf8c317d 841 Pfam PF02272 DHHA1 domain 321 440 5.4E-23 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Amet_2351 aa39f457d76ecbbe326759a5bf8c317d 841 Pfam PF01368 DHH family 80 215 7.0E-12 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_2351 aa39f457d76ecbbe326759a5bf8c317d 841 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 669 824 5.8E-7 T 12-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal Amet_2351 aa39f457d76ecbbe326759a5bf8c317d 841 Gene3D G3DSA:3.90.1640.30 55 321 2.1E-98 T 12-10-2018 Amet_2351 aa39f457d76ecbbe326759a5bf8c317d 841 SUPERFAMILY SSF64182 55 454 1.57E-124 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily Amet_2351 aa39f457d76ecbbe326759a5bf8c317d 841 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 27 563 6.5E-183 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Amet_4714 60b47ce74cf8a8c8c2f27fd334d43b46 307 SUPERFAMILY SSF103481 41 132 3.92E-12 T 12-10-2018 Amet_4714 60b47ce74cf8a8c8c2f27fd334d43b46 307 Pfam PF00892 EamA-like transporter family 142 284 1.7E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_4714 60b47ce74cf8a8c8c2f27fd334d43b46 307 Pfam PF00892 EamA-like transporter family 9 130 4.4E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_4714 60b47ce74cf8a8c8c2f27fd334d43b46 307 SUPERFAMILY SSF103481 194 288 2.88E-10 T 12-10-2018 Amet_2309 13dc155c5a72b07b9b639dd53e5175c1 230 SUPERFAMILY SSF52374 21 219 1.16E-51 T 12-10-2018 Amet_2309 13dc155c5a72b07b9b639dd53e5175c1 230 Gene3D G3DSA:3.40.50.620 21 226 2.5E-64 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_2309 13dc155c5a72b07b9b639dd53e5175c1 230 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 21 220 31.184 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Amet_2309 13dc155c5a72b07b9b639dd53e5175c1 230 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 25 219 9.3E-61 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Amet_2309 13dc155c5a72b07b9b639dd53e5175c1 230 Pfam PF01467 Cytidylyltransferase-like 25 194 8.3E-31 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amet_2309 13dc155c5a72b07b9b639dd53e5175c1 230 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 86 1.2E-11 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amet_2897 83601f430fb213856a1733ab8b3b8a0d 224 SMART SM01133 4 216 1.8E-98 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amet_2897 83601f430fb213856a1733ab8b3b8a0d 224 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 4 214 1.3E-86 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amet_2897 83601f430fb213856a1733ab8b3b8a0d 224 Pfam PF01791 DeoC/LacD family aldolase 7 208 8.1E-16 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amet_2897 83601f430fb213856a1733ab8b3b8a0d 224 Gene3D G3DSA:3.20.20.70 1 223 2.5E-92 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2897 83601f430fb213856a1733ab8b3b8a0d 224 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 218 35.636 T 12-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Amet_2897 83601f430fb213856a1733ab8b3b8a0d 224 PIRSF PIRSF001357 1 223 6.1E-74 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Amet_2897 83601f430fb213856a1733ab8b3b8a0d 224 SUPERFAMILY SSF51569 3 216 1.67E-80 T 12-10-2018 Amet_2670 2519fb7820e1298e03ce88424e23b471 296 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 208 1.4E-77 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2670 2519fb7820e1298e03ce88424e23b471 296 SUPERFAMILY SSF55120 2 223 3.45E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2670 2519fb7820e1298e03ce88424e23b471 296 Gene3D G3DSA:2.30.130.10 222 292 2.0E-6 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 Amet_2670 2519fb7820e1298e03ce88424e23b471 296 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 171 216 5.4E-13 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Amet_2670 2519fb7820e1298e03ce88424e23b471 296 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 170 3.7E-59 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Amet_2670 2519fb7820e1298e03ce88424e23b471 296 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 230 282 7.5E-6 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2670 2519fb7820e1298e03ce88424e23b471 296 Gene3D G3DSA:3.30.2350.10 1 220 1.2E-86 T 12-10-2018 Amet_2670 2519fb7820e1298e03ce88424e23b471 296 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 295 18.895 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_1055 589d9ac0834f2a70b9c1e39ac42090fe 147 Pfam PF13655 N-terminal domain of reverse transcriptase 5 86 1.3E-29 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain Amet_3361 589d9ac0834f2a70b9c1e39ac42090fe 147 Pfam PF13655 N-terminal domain of reverse transcriptase 5 86 1.3E-29 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 SUPERFAMILY SSF55874 302 467 4.45E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 Gene3D G3DSA:3.30.565.10 314 467 2.0E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 1.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 1.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 1.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 1.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 Gene3D G3DSA:1.10.287.130 254 313 1.5E-11 T 12-10-2018 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 310 7.0E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 SMART SM00304 194 247 0.0025 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 466 2.2E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 SUPERFAMILY SSF47384 231 312 7.06E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 SMART SM00388 248 312 2.5E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 Gene3D G3DSA:1.20.1480.50 161 253 6.9E-8 T 12-10-2018 Amet_1100 8639bc1c66af1e5a3f33715b81327572 467 SMART SM00387 357 467 2.6E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0671 59b71e31eb806822d8ae3a2b7e3ac8af 334 Pfam PF05544 Proline racemase 10 332 2.1E-130 T 12-10-2018 IPR008794 Proline racemase family Amet_0671 59b71e31eb806822d8ae3a2b7e3ac8af 334 PIRSF PIRSF029792 1 334 4.0E-148 T 12-10-2018 IPR008794 Proline racemase family Amet_0671 59b71e31eb806822d8ae3a2b7e3ac8af 334 SUPERFAMILY SSF54506 1 332 2.13E-111 T 12-10-2018 Amet_0671 59b71e31eb806822d8ae3a2b7e3ac8af 334 Gene3D G3DSA:3.10.310.10 146 311 5.8E-135 T 12-10-2018 Amet_0671 59b71e31eb806822d8ae3a2b7e3ac8af 334 Gene3D G3DSA:3.10.310.10 7 333 5.8E-135 T 12-10-2018 Amet_2320 9716e804387527cf76af97c094dc0775 209 SMART SM00278 186 205 4.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_2320 9716e804387527cf76af97c094dc0775 209 SMART SM00278 156 175 0.061 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_2320 9716e804387527cf76af97c094dc0775 209 Pfam PF12836 Helix-hairpin-helix motif 145 207 1.9E-20 T 12-10-2018 Amet_2320 9716e804387527cf76af97c094dc0775 209 Gene3D G3DSA:3.10.560.10 57 151 3.1E-11 T 12-10-2018 Amet_2320 9716e804387527cf76af97c094dc0775 209 Pfam PF10531 SLBB domain 65 110 6.6E-12 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_2320 9716e804387527cf76af97c094dc0775 209 SUPERFAMILY SSF47781 140 207 8.23E-26 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_2320 9716e804387527cf76af97c094dc0775 209 Gene3D G3DSA:1.10.150.310 152 208 1.4E-12 T 12-10-2018 Amet_2320 9716e804387527cf76af97c094dc0775 209 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 144 207 8.6E-19 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Amet_2035 2eca0d2c14a0587294e2071a5c7c4389 545 PIRSF PIRSF002741 1 533 9.0E-83 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_2035 2eca0d2c14a0587294e2071a5c7c4389 545 ProSitePatterns PS00018 EF-hand calcium-binding domain. 363 375 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site Amet_2035 2eca0d2c14a0587294e2071a5c7c4389 545 SUPERFAMILY SSF53850 47 543 2.95E-105 T 12-10-2018 Amet_2035 2eca0d2c14a0587294e2071a5c7c4389 545 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 95 117 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site Amet_2035 2eca0d2c14a0587294e2071a5c7c4389 545 Gene3D G3DSA:3.40.190.10 62 528 4.0E-188 T 12-10-2018 Amet_2035 2eca0d2c14a0587294e2071a5c7c4389 545 Gene3D G3DSA:3.10.105.10 269 516 4.0E-188 T 12-10-2018 Amet_2035 2eca0d2c14a0587294e2071a5c7c4389 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 447 2.0E-77 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_3767 17d76da11f74b582e8f5e919926a999d 592 Gene3D G3DSA:1.10.287.830 176 221 2.6E-14 T 12-10-2018 Amet_3767 17d76da11f74b582e8f5e919926a999d 592 SUPERFAMILY SSF55486 9 575 2.47E-118 T 12-10-2018 Amet_3767 17d76da11f74b582e8f5e919926a999d 592 Pfam PF01432 Peptidase family M3 199 579 3.1E-72 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Amet_3767 17d76da11f74b582e8f5e919926a999d 592 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 4 590 6.0E-194 T 12-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 Amet_3767 17d76da11f74b582e8f5e919926a999d 592 Gene3D G3DSA:1.20.140.70 20 174 9.2E-48 T 12-10-2018 Amet_3767 17d76da11f74b582e8f5e919926a999d 592 Pfam PF08439 Oligopeptidase F 110 178 2.7E-20 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Amet_3767 17d76da11f74b582e8f5e919926a999d 592 Gene3D G3DSA:1.10.1370.20 223 592 1.2E-136 T 12-10-2018 Amet_3346 1a9028db57f8008a1e119940a6b94626 154 Gene3D G3DSA:3.10.20.30 1 78 6.4E-28 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_3346 1a9028db57f8008a1e119940a6b94626 154 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Amet_3346 1a9028db57f8008a1e119940a6b94626 154 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 58 3.0E-5 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amet_3346 1a9028db57f8008a1e119940a6b94626 154 Gene3D G3DSA:1.10.150.120 79 153 7.9E-25 T 12-10-2018 Amet_3346 1a9028db57f8008a1e119940a6b94626 154 SUPERFAMILY SSF54292 3 81 7.47E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_3346 1a9028db57f8008a1e119940a6b94626 154 SUPERFAMILY SSF47741 76 149 4.32E-26 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Amet_3346 1a9028db57f8008a1e119940a6b94626 154 Pfam PF01799 [2Fe-2S] binding domain 76 145 1.3E-24 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Amet_4532 6b6a7eb3aaa89acf42610199b02c2e0c 517 Gene3D G3DSA:3.40.1080.10 274 517 3.3E-115 T 12-10-2018 Amet_4532 6b6a7eb3aaa89acf42610199b02c2e0c 517 SUPERFAMILY SSF100950 275 515 1.03E-80 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_4532 6b6a7eb3aaa89acf42610199b02c2e0c 517 PIRSF PIRSF000858 1 517 6.1E-240 T 12-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 Amet_4532 6b6a7eb3aaa89acf42610199b02c2e0c 517 Gene3D G3DSA:3.40.1080.10 1 267 3.3E-110 T 12-10-2018 Amet_4532 6b6a7eb3aaa89acf42610199b02c2e0c 517 Pfam PF01144 Coenzyme A transferase 6 241 2.3E-31 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amet_4532 6b6a7eb3aaa89acf42610199b02c2e0c 517 SUPERFAMILY SSF100950 4 252 3.19E-93 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_4532 6b6a7eb3aaa89acf42610199b02c2e0c 517 SMART SM00882 5 242 8.6E-80 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amet_4532 6b6a7eb3aaa89acf42610199b02c2e0c 517 SMART SM00882 280 488 0.0018 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amet_2139 a91a9febbde52caaa536439732985e28 119 SUPERFAMILY SSF55166 9 114 6.28E-32 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_2139 a91a9febbde52caaa536439732985e28 119 Pfam PF08291 Peptidase M15 9 107 2.6E-27 T 12-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 Amet_2139 a91a9febbde52caaa536439732985e28 119 Gene3D G3DSA:3.30.1380.10 12 119 2.1E-29 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_0929 23cde411cb3f10fff8326692da02b42f 265 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 156 260 1.5E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0929 23cde411cb3f10fff8326692da02b42f 265 SUPERFAMILY SSF51735 1 107 4.99E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0929 23cde411cb3f10fff8326692da02b42f 265 SMART SM00283 74 265 9.4E-4 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0929 23cde411cb3f10fff8326692da02b42f 265 SUPERFAMILY SSF58104 77 263 7.59E-38 T 12-10-2018 Amet_0929 23cde411cb3f10fff8326692da02b42f 265 Gene3D G3DSA:3.40.50.720 1 80 6.4E-6 T 12-10-2018 Amet_0929 23cde411cb3f10fff8326692da02b42f 265 Gene3D G3DSA:1.10.287.950 85 265 1.8E-36 T 12-10-2018 Amet_1981 012451b3bb3fa881ebd4c669d08feb0b 92 Pfam PF14286 DHHW protein 43 85 5.2E-7 T 12-10-2018 IPR025945 DHHW protein Amet_1482 6d643525896873a69f05f669ba531388 230 Pfam PF12698 ABC-2 family transporter protein 40 216 3.7E-8 T 12-10-2018 Amet_3210 de615b309af1df60567debcbcfc6869b 254 Gene3D G3DSA:3.30.420.40 4 251 6.1E-79 T 12-10-2018 Amet_3210 de615b309af1df60567debcbcfc6869b 254 SUPERFAMILY SSF53067 3 251 2.36E-36 T 12-10-2018 Amet_3210 de615b309af1df60567debcbcfc6869b 254 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 251 5.9E-59 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Amet_3210 de615b309af1df60567debcbcfc6869b 254 Gene3D G3DSA:3.30.420.40 95 236 6.1E-79 T 12-10-2018 Amet_3210 de615b309af1df60567debcbcfc6869b 254 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 2 250 4.0E-82 T 12-10-2018 IPR008275 CoA enzyme activase Amet_0130 9004075da394fac2c027737ad3690b30 788 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 234 783 1.1E-159 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 Pfam PF00403 Heavy-metal-associated domain 13 59 6.8E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amet_0130 9004075da394fac2c027737ad3690b30 788 Pfam PF00403 Heavy-metal-associated domain 94 135 3.7E-9 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Amet_0130 9004075da394fac2c027737ad3690b30 788 Gene3D G3DSA:3.40.1110.10 496 607 1.0E-81 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 SUPERFAMILY SSF81653 286 383 3.01E-23 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 Gene3D G3DSA:3.30.70.100 89 171 5.5E-9 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 Gene3D G3DSA:3.30.70.100 9 88 2.9E-11 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 SUPERFAMILY SSF55008 88 158 8.12E-10 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_0130 9004075da394fac2c027737ad3690b30 788 Pfam PF00702 haloacid dehalogenase-like hydrolase 481 693 6.6E-37 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 265 759 1.1E-75 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 SUPERFAMILY SSF55008 4 67 2.62E-12 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_0130 9004075da394fac2c027737ad3690b30 788 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 487 493 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 234 782 3.2E-175 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 Gene3D G3DSA:2.70.150.20 272 387 2.7E-30 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 633 1.1E-22 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 485 499 1.1E-22 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 679 698 1.1E-22 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 1.1E-22 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 703 715 1.1E-22 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 SUPERFAMILY SSF56784 483 780 9.28E-60 T 12-10-2018 IPR036412 HAD-like superfamily Amet_0130 9004075da394fac2c027737ad3690b30 788 Pfam PF00122 E1-E2 ATPase 285 464 1.3E-48 T 12-10-2018 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00941 Cadmium-transporting ATPase signature 102 123 2.5E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00941 Cadmium-transporting ATPase signature 197 214 2.5E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00941 Cadmium-transporting ATPase signature 368 382 2.5E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00941 Cadmium-transporting ATPase signature 349 365 2.5E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 PRINTS PR00941 Cadmium-transporting ATPase signature 268 288 2.5E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Amet_0130 9004075da394fac2c027737ad3690b30 788 Gene3D G3DSA:3.40.50.1000 466 732 1.0E-81 T 12-10-2018 IPR023214 HAD superfamily Amet_0130 9004075da394fac2c027737ad3690b30 788 SUPERFAMILY SSF81665 234 478 2.48E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Amet_2853 ebf2a8847be6532842bdd471a6b382d8 321 Pfam PF00589 Phage integrase family 134 285 5.2E-27 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_2853 ebf2a8847be6532842bdd471a6b382d8 321 SUPERFAMILY SSF56349 14 295 1.18E-39 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_2853 ebf2a8847be6532842bdd471a6b382d8 321 Gene3D G3DSA:1.10.443.10 115 313 6.5E-39 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_2853 ebf2a8847be6532842bdd471a6b382d8 321 Gene3D G3DSA:1.10.150.130 8 114 5.5E-8 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Amet_2913 d27d7e0b9f7d0bbb20542a78d1dc4276 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 302 2.5E-33 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2913 d27d7e0b9f7d0bbb20542a78d1dc4276 303 Gene3D G3DSA:1.10.3720.10 89 302 9.3E-25 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2913 d27d7e0b9f7d0bbb20542a78d1dc4276 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 2.0E-17 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amet_2913 d27d7e0b9f7d0bbb20542a78d1dc4276 303 SUPERFAMILY SSF161098 94 287 4.19E-30 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4791 5acc0934f76f13de2a543deea06e17c2 289 Pfam PF02195 ParB-like nuclease domain 38 124 2.2E-26 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_4791 5acc0934f76f13de2a543deea06e17c2 289 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 33 208 3.1E-58 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Amet_4791 5acc0934f76f13de2a543deea06e17c2 289 Gene3D G3DSA:3.90.1530.30 49 111 1.9E-28 T 12-10-2018 Amet_4791 5acc0934f76f13de2a543deea06e17c2 289 Gene3D G3DSA:1.10.10.2830 113 226 5.5E-33 T 12-10-2018 Amet_4791 5acc0934f76f13de2a543deea06e17c2 289 SMART SM00470 36 125 1.1E-33 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_4791 5acc0934f76f13de2a543deea06e17c2 289 SUPERFAMILY SSF110849 35 170 8.89E-34 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Amet_2545 b952371800dedeb3798f543edf017287 476 Pfam PF01938 TRAM domain 414 475 1.3E-13 T 12-10-2018 IPR002792 TRAM domain Amet_2545 b952371800dedeb3798f543edf017287 476 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 44 472 7.4E-154 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Amet_2545 b952371800dedeb3798f543edf017287 476 Gene3D G3DSA:3.80.30.20 183 416 5.4E-93 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_2545 b952371800dedeb3798f543edf017287 476 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 44 474 6.3E-169 T 12-10-2018 Amet_2545 b952371800dedeb3798f543edf017287 476 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 39 476 73.07 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Amet_2545 b952371800dedeb3798f543edf017287 476 Pfam PF04055 Radical SAM superfamily 188 358 2.2E-33 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_2545 b952371800dedeb3798f543edf017287 476 Gene3D G3DSA:3.40.50.12160 40 170 1.4E-33 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Amet_2545 b952371800dedeb3798f543edf017287 476 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 188 208 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Amet_2545 b952371800dedeb3798f543edf017287 476 SMART SM00729 184 402 1.1E-56 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_2545 b952371800dedeb3798f543edf017287 476 SUPERFAMILY SSF102114 182 406 1.31E-56 T 12-10-2018 Amet_2545 b952371800dedeb3798f543edf017287 476 Pfam PF00919 Uncharacterized protein family UPF0004 42 141 4.8E-27 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Amet_2293 1efbd87653615e8e1ce1937d887d1def 950 Gene3D G3DSA:3.90.1310.30 212 380 4.9E-27 T 12-10-2018 Amet_2293 1efbd87653615e8e1ce1937d887d1def 950 Gene3D G3DSA:3.90.1310.30 46 184 1.2E-7 T 12-10-2018 Amet_2293 1efbd87653615e8e1ce1937d887d1def 950 SUPERFAMILY SSF56601 885 934 3.26E-6 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_2293 1efbd87653615e8e1ce1937d887d1def 950 SUPERFAMILY SSF56601 336 814 1.55E-65 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_2293 1efbd87653615e8e1ce1937d887d1def 950 SUPERFAMILY SSF56519 46 384 7.46E-42 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Amet_2293 1efbd87653615e8e1ce1937d887d1def 950 Pfam PF03717 Penicillin-binding Protein dimerisation domain 54 370 2.2E-56 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Amet_2293 1efbd87653615e8e1ce1937d887d1def 950 Pfam PF00905 Penicillin binding protein transpeptidase domain 432 816 1.8E-45 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amet_2293 1efbd87653615e8e1ce1937d887d1def 950 Gene3D G3DSA:3.40.710.10 874 939 2.1E-10 T 12-10-2018 Amet_2909 5477fe141177bd788260d4b0e3cd7e51 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 439 8.4E-102 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_2909 5477fe141177bd788260d4b0e3cd7e51 521 Gene3D G3DSA:3.90.76.10 58 204 1.9E-150 T 12-10-2018 Amet_2909 5477fe141177bd788260d4b0e3cd7e51 521 SUPERFAMILY SSF53850 44 520 1.79E-144 T 12-10-2018 Amet_2909 5477fe141177bd788260d4b0e3cd7e51 521 Gene3D G3DSA:3.10.105.10 284 497 1.9E-150 T 12-10-2018 Amet_2909 5477fe141177bd788260d4b0e3cd7e51 521 Gene3D G3DSA:3.40.190.10 205 509 1.9E-150 T 12-10-2018 Amet_2909 5477fe141177bd788260d4b0e3cd7e51 521 PIRSF PIRSF002741 1 521 5.2E-134 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_0574 4abcee17ad5d41381c01a98a64b26b38 195 SUPERFAMILY SSF54211 88 180 1.19E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_0574 4abcee17ad5d41381c01a98a64b26b38 195 Gene3D G3DSA:3.30.230.40 1 90 7.8E-34 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Amet_0574 4abcee17ad5d41381c01a98a64b26b38 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Amet_0574 4abcee17ad5d41381c01a98a64b26b38 195 SUPERFAMILY SSF54211 3 87 3.29E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_0574 4abcee17ad5d41381c01a98a64b26b38 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Amet_0574 4abcee17ad5d41381c01a98a64b26b38 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 195 41.048 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Amet_0574 4abcee17ad5d41381c01a98a64b26b38 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 1.2E-63 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Amet_0574 4abcee17ad5d41381c01a98a64b26b38 195 Gene3D G3DSA:3.30.230.40 91 195 5.8E-37 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Amet_1122 ca1f62c21c3819ad13f217563d8b5d96 472 PIRSF PIRSF006603 35 472 1.9E-72 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1122 ca1f62c21c3819ad13f217563d8b5d96 472 TIGRFAM TIGR00797 matE: MATE efflux family protein 54 444 7.5E-62 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1122 ca1f62c21c3819ad13f217563d8b5d96 472 Pfam PF01554 MatE 44 203 1.7E-21 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1122 ca1f62c21c3819ad13f217563d8b5d96 472 Pfam PF01554 MatE 272 427 6.2E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3202 8b96c9fd35dbe8a6d27e10297401c313 538 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 52 519 4.8E-173 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_3202 8b96c9fd35dbe8a6d27e10297401c313 538 PIRSF PIRSF005690 37 535 4.5E-167 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_1616 55800bce7307edf8efd1a5ea2758c2f4 410 SUPERFAMILY SSF53383 28 399 2.2E-85 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_1616 55800bce7307edf8efd1a5ea2758c2f4 410 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 248 261 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amet_1616 55800bce7307edf8efd1a5ea2758c2f4 410 Gene3D G3DSA:3.90.1150.10 28 390 1.5E-85 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_1616 55800bce7307edf8efd1a5ea2758c2f4 410 Gene3D G3DSA:3.40.640.10 55 296 1.5E-85 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_1616 55800bce7307edf8efd1a5ea2758c2f4 410 Pfam PF00155 Aminotransferase class I and II 45 387 1.8E-46 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_0479 5e714aba04ec1181b9b96420ddf033d5 642 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 595 610 1.1E-7 T 12-10-2018 Amet_0479 5e714aba04ec1181b9b96420ddf033d5 642 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 173 1.1E-7 T 12-10-2018 Amet_0479 5e714aba04ec1181b9b96420ddf033d5 642 Pfam PF04205 FMN-binding domain 51 122 3.0E-17 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_0479 5e714aba04ec1181b9b96420ddf033d5 642 SMART SM00900 51 125 9.6E-18 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_0479 5e714aba04ec1181b9b96420ddf033d5 642 Pfam PF00890 FAD binding domain 151 620 7.3E-48 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0479 5e714aba04ec1181b9b96420ddf033d5 642 SUPERFAMILY SSF51905 141 640 9.38E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0479 5e714aba04ec1181b9b96420ddf033d5 642 SUPERFAMILY SSF56425 410 579 1.64E-17 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_2187 69d251a5f15692ea4748259bb12459ca 315 Pfam PF13280 WYL domain 139 310 1.4E-39 T 12-10-2018 IPR026881 WYL domain Amet_2187 69d251a5f15692ea4748259bb12459ca 315 Pfam PF08279 HTH domain 11 60 3.5E-6 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Amet_2187 69d251a5f15692ea4748259bb12459ca 315 SUPERFAMILY SSF46785 4 64 3.96E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0137 b12f14e602a99557170d5b204800c89f 184 Hamap MF_01469 Ribonuclease M5 [rnmV]. 2 175 31.579 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 Amet_0137 b12f14e602a99557170d5b204800c89f 184 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 174 6.0E-45 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 Amet_0137 b12f14e602a99557170d5b204800c89f 184 Pfam PF13662 Toprim domain 3 71 4.1E-7 T 12-10-2018 IPR006171 TOPRIM domain Amet_0137 b12f14e602a99557170d5b204800c89f 184 SUPERFAMILY SSF110455 1 114 3.14E-33 T 12-10-2018 Amet_0137 b12f14e602a99557170d5b204800c89f 184 Gene3D G3DSA:3.40.1360.20 1 119 2.8E-23 T 12-10-2018 Amet_0137 b12f14e602a99557170d5b204800c89f 184 Pfam PF13331 Domain of unknown function (DUF4093) 89 173 7.6E-26 T 12-10-2018 IPR025156 Ribonuclease M5, C-terminal domain Amet_0137 b12f14e602a99557170d5b204800c89f 184 SMART SM00493 3 76 3.6E-13 T 12-10-2018 IPR006171 TOPRIM domain Amet_3745 57ba96c8066d75a7536334d67b127d60 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 270 6.0E-52 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 38 63 6.0E-52 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 349 367 6.0E-52 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 446 6.0E-52 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 420 6.0E-52 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 123 142 6.0E-52 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 373 391 6.0E-52 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 105 123 6.0E-52 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 16 526 4.9E-109 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 Pfam PF01019 Gamma-glutamyltranspeptidase 31 529 7.7E-120 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 SUPERFAMILY SSF56235 13 533 1.36E-134 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_3745 57ba96c8066d75a7536334d67b127d60 545 Gene3D G3DSA:1.10.246.130 239 337 4.3E-16 T 12-10-2018 Amet_3745 57ba96c8066d75a7536334d67b127d60 545 Gene3D G3DSA:3.60.20.40 349 533 2.6E-48 T 12-10-2018 Amet_0207 36f3ca6e0196933f1dc20f1fe5c4da04 363 Gene3D G3DSA:3.40.50.2000 4 359 1.0E-146 T 12-10-2018 Amet_0207 36f3ca6e0196933f1dc20f1fe5c4da04 363 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 361 3.7E-156 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Amet_0207 36f3ca6e0196933f1dc20f1fe5c4da04 363 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 361 2.0E-118 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amet_0207 36f3ca6e0196933f1dc20f1fe5c4da04 363 Gene3D G3DSA:3.40.50.2000 188 348 1.0E-146 T 12-10-2018 Amet_0207 36f3ca6e0196933f1dc20f1fe5c4da04 363 SUPERFAMILY SSF53756 1 361 1.53E-134 T 12-10-2018 Amet_0895 963cca6e3e48f842aa7281f0f9a12527 356 Pfam PF07470 Glycosyl Hydrolase Family 88 16 355 8.0E-95 T 12-10-2018 IPR010905 Glycosyl hydrolase, family 88 Amet_0895 963cca6e3e48f842aa7281f0f9a12527 356 Gene3D G3DSA:1.50.10.10 3 355 3.2E-131 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Amet_0895 963cca6e3e48f842aa7281f0f9a12527 356 SUPERFAMILY SSF48208 6 355 7.66E-70 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Amet_3597 9794e56b093337370d7a55e9721c1f47 283 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 280 2.0E-83 T 12-10-2018 IPR003797 DegV Amet_3597 9794e56b093337370d7a55e9721c1f47 283 Gene3D G3DSA:3.30.1180.10 154 283 1.9E-40 T 12-10-2018 Amet_3597 9794e56b093337370d7a55e9721c1f47 283 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 279 1.1E-90 T 12-10-2018 IPR003797 DegV Amet_3597 9794e56b093337370d7a55e9721c1f47 283 Gene3D G3DSA:3.40.50.10170 1 152 9.3E-49 T 12-10-2018 Amet_3597 9794e56b093337370d7a55e9721c1f47 283 SUPERFAMILY SSF82549 3 281 2.12E-79 T 12-10-2018 Amet_2030 77c5801dfd632f095277441358fc3057 650 SUPERFAMILY SSF54292 2 88 1.47E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_2030 77c5801dfd632f095277441358fc3057 650 Pfam PF14574 Domain of unknown function (DUF4445) 213 624 2.8E-147 T 12-10-2018 IPR027980 Protein of unknown function DUF4445 Amet_2030 77c5801dfd632f095277441358fc3057 650 Gene3D G3DSA:2.40.50.570 123 210 6.1E-10 T 12-10-2018 Amet_2030 77c5801dfd632f095277441358fc3057 650 SUPERFAMILY SSF53067 215 562 4.8E-8 T 12-10-2018 Amet_2030 77c5801dfd632f095277441358fc3057 650 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 79 1.4E-11 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amet_2030 77c5801dfd632f095277441358fc3057 650 Gene3D G3DSA:3.30.420.480 211 387 2.8E-58 T 12-10-2018 Amet_2030 77c5801dfd632f095277441358fc3057 650 Gene3D G3DSA:3.10.20.30 1 92 2.1E-24 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_0589 93cc8f400c21f7db82a03e0fb7c84d88 328 Gene3D G3DSA:3.40.50.2300 142 315 8.8E-58 T 12-10-2018 Amet_0589 93cc8f400c21f7db82a03e0fb7c84d88 328 Gene3D G3DSA:3.40.50.2300 40 307 8.8E-58 T 12-10-2018 Amet_0589 93cc8f400c21f7db82a03e0fb7c84d88 328 Pfam PF13407 Periplasmic binding protein domain 41 296 3.7E-47 T 12-10-2018 IPR025997 Periplasmic binding protein Amet_0589 93cc8f400c21f7db82a03e0fb7c84d88 328 SUPERFAMILY SSF53822 39 318 3.2E-56 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_2761 febcfb32bc06b4aea1d626673400eb86 59 SUPERFAMILY SSF57829 1 56 2.81E-23 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Amet_2761 febcfb32bc06b4aea1d626673400eb86 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 56 21.221 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2761 febcfb32bc06b4aea1d626673400eb86 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 5.8E-28 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2761 febcfb32bc06b4aea1d626673400eb86 59 Pfam PF01783 Ribosomal L32p protein family 2 57 5.8E-28 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3238 f79759ab99948ce50b81a1ded41139ae 258 Gene3D G3DSA:3.30.70.20 151 207 1.2E-8 T 12-10-2018 Amet_3238 f79759ab99948ce50b81a1ded41139ae 258 Pfam PF12801 4Fe-4S binding domain 37 79 3.2E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_3238 f79759ab99948ce50b81a1ded41139ae 258 Pfam PF12801 4Fe-4S binding domain 132 172 1.3E-4 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_3238 f79759ab99948ce50b81a1ded41139ae 258 Gene3D G3DSA:3.30.70.20 208 256 6.7E-6 T 12-10-2018 Amet_3238 f79759ab99948ce50b81a1ded41139ae 258 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 219 230 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3238 f79759ab99948ce50b81a1ded41139ae 258 SUPERFAMILY SSF54862 51 244 1.06E-17 T 12-10-2018 Amet_3238 f79759ab99948ce50b81a1ded41139ae 258 Pfam PF13187 4Fe-4S dicluster domain 187 232 5.0E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_3238 f79759ab99948ce50b81a1ded41139ae 258 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 Pfam PF01479 S4 domain 89 135 9.3E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 ProSitePatterns PS00632 Ribosomal protein S4 signature. 86 110 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 SMART SM00363 88 152 1.7E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 197 28.265 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 197 1.4E-62 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 Gene3D G3DSA:3.10.290.10 87 182 4.3E-62 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 Gene3D G3DSA:1.10.1050.10 6 197 4.3E-62 T 12-10-2018 Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 SUPERFAMILY SSF55174 5 197 8.24E-53 T 12-10-2018 Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 SMART SM01390 3 87 8.8E-25 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Amet_3013 34ec03d8aea0521fd9e3d2b2d34e263d 199 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 87 5.7E-17 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Amet_4576 18d678f1892df38966d1dfdf22be912b 262 Gene3D G3DSA:3.40.50.1950 27 204 7.1E-9 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amet_4576 18d678f1892df38966d1dfdf22be912b 262 SUPERFAMILY SSF52507 29 145 2.49E-6 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Amet_4497 b940e1a0d8863bf4878dc611cc46fa27 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 2.5E-81 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Amet_4497 b940e1a0d8863bf4878dc611cc46fa27 248 SUPERFAMILY SSF75217 68 244 8.5E-51 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Amet_4497 b940e1a0d8863bf4878dc611cc46fa27 248 SUPERFAMILY SSF55315 3 77 3.71E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Amet_4497 b940e1a0d8863bf4878dc611cc46fa27 248 Pfam PF00588 SpoU rRNA Methylase family 97 237 9.6E-41 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Amet_4497 b940e1a0d8863bf4878dc611cc46fa27 248 Gene3D G3DSA:3.40.1280.10 75 244 3.3E-59 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amet_4497 b940e1a0d8863bf4878dc611cc46fa27 248 Gene3D G3DSA:3.30.1330.30 1 74 2.7E-14 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Amet_4497 b940e1a0d8863bf4878dc611cc46fa27 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 79 1.8E-23 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amet_4497 b940e1a0d8863bf4878dc611cc46fa27 248 SMART SM00967 5 80 6.2E-24 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amet_1258 7d20e57bbe289e868787e65ac4c4a34f 87 SUPERFAMILY SSF55594 3 87 1.22E-26 T 12-10-2018 IPR035895 HPr-like superfamily Amet_1258 7d20e57bbe289e868787e65ac4c4a34f 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 5.4E-31 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_1258 7d20e57bbe289e868787e65ac4c4a34f 87 Pfam PF00381 PTS HPr component phosphorylation site 3 82 9.4E-28 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_1258 7d20e57bbe289e868787e65ac4c4a34f 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.3E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_1258 7d20e57bbe289e868787e65ac4c4a34f 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.3E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_1258 7d20e57bbe289e868787e65ac4c4a34f 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.3E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like Amet_1258 7d20e57bbe289e868787e65ac4c4a34f 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Amet_1258 7d20e57bbe289e868787e65ac4c4a34f 87 Gene3D G3DSA:3.30.1340.10 1 84 1.3E-31 T 12-10-2018 IPR035895 HPr-like superfamily Amet_0360 e7c7273c40fa1444692f23d2be6f3318 294 Gene3D G3DSA:2.70.70.10 165 294 2.6E-31 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_0360 e7c7273c40fa1444692f23d2be6f3318 294 SUPERFAMILY SSF51261 112 290 2.35E-30 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_0360 e7c7273c40fa1444692f23d2be6f3318 294 Pfam PF01551 Peptidase family M23 188 286 6.6E-22 T 12-10-2018 IPR016047 Peptidase M23 Amet_3171 02854bac69c89b01d3d7095cb4e12e77 345 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 340 1.6E-64 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 Pfam PF03023 MviN-like protein 46 490 2.6E-97 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 21 480 17.383 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 22 520 8.4E-113 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 PRINTS PR01806 Virulence factor MviN signature 148 172 2.8E-29 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 PRINTS PR01806 Virulence factor MviN signature 272 298 2.8E-29 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 PRINTS PR01806 Virulence factor MviN signature 172 193 2.8E-29 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 PRINTS PR01806 Virulence factor MviN signature 51 70 2.8E-29 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 PRINTS PR01806 Virulence factor MviN signature 370 389 2.8E-29 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 PRINTS PR01806 Virulence factor MviN signature 422 439 2.8E-29 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1317 6396e2ae2f811afa896fbda29ba7436d 533 PIRSF PIRSF002869 16 525 6.2E-138 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_2136 eb1fbbc5af423ffad86750dfb7ee5f29 76 Pfam PF11148 Protein of unknown function (DUF2922) 6 72 2.9E-23 T 12-10-2018 IPR021321 Protein of unknown function DUF2922 Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 422 6.0E-177 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 SMART SM00788 3 422 4.7E-274 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 Gene3D G3DSA:3.40.440.10 5 254 9.3E-101 T 12-10-2018 Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 427 197.835 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 SUPERFAMILY SSF52540 1 426 2.66E-172 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 Pfam PF00709 Adenylosuccinate synthetase 4 421 2.4E-185 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 Gene3D G3DSA:3.90.170.10 265 427 3.4E-73 T 12-10-2018 Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Amet_4765 c09a7f21ee281adff386def5ce2a8843 427 Gene3D G3DSA:1.10.300.10 100 199 9.3E-101 T 12-10-2018 Amet_4061 457e5ddf742221a26aa2da4f59b338b2 428 SMART SM00909 328 419 2.4E-12 T 12-10-2018 IPR019606 GerMN domain Amet_4061 457e5ddf742221a26aa2da4f59b338b2 428 SMART SM00909 200 287 7.1E-9 T 12-10-2018 IPR019606 GerMN domain Amet_4061 457e5ddf742221a26aa2da4f59b338b2 428 Pfam PF10646 Sporulation and spore germination 342 413 7.3E-9 T 12-10-2018 IPR019606 GerMN domain Amet_4061 457e5ddf742221a26aa2da4f59b338b2 428 Pfam PF10646 Sporulation and spore germination 175 280 5.9E-8 T 12-10-2018 IPR019606 GerMN domain Amet_1533 92487ceae9ab98aa71e09fd1a064faf3 444 Pfam PF13546 DDE superfamily endonuclease 46 251 4.8E-13 T 12-10-2018 IPR038721 Transposase IS701-like, DDE domain Amet_1533 92487ceae9ab98aa71e09fd1a064faf3 444 SUPERFAMILY SSF53098 89 402 9.86E-12 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 SUPERFAMILY SSF55874 402 524 8.38E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 SUPERFAMILY SSF51182 4 200 9.19E-27 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 Pfam PF07883 Cupin domain 42 111 2.6E-14 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 Pfam PF10114 Sensory domain found in PocR 138 293 8.8E-30 T 12-10-2018 IPR018771 PocR domain Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 526 1.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 SMART SM00387 419 527 1.2E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 Gene3D G3DSA:3.30.565.10 382 532 4.5E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 Gene3D G3DSA:2.60.120.10 3 111 4.0E-19 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 Pfam PF06580 Histidine kinase 326 403 3.6E-22 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 502 3.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 3.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3536 54d754a49886a8633d9c26738c4dc36c 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 470 3.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4572 c89000b424d14cd2915922c8a09699f6 445 Pfam PF01979 Amidohydrolase family 53 412 1.5E-80 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_4572 c89000b424d14cd2915922c8a09699f6 445 SUPERFAMILY SSF51338 4 435 1.19E-31 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4572 c89000b424d14cd2915922c8a09699f6 445 SUPERFAMILY SSF51556 56 362 1.84E-102 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_4572 c89000b424d14cd2915922c8a09699f6 445 Gene3D G3DSA:3.20.20.140 57 354 3.1E-151 T 12-10-2018 Amet_4572 c89000b424d14cd2915922c8a09699f6 445 Gene3D G3DSA:2.30.40.10 11 429 3.1E-151 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4572 c89000b424d14cd2915922c8a09699f6 445 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 3 438 41.327 T 12-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 SUPERFAMILY SSF158472 69 117 7.19E-8 T 12-10-2018 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 340 9.8E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 SUPERFAMILY SSF55874 178 339 3.8E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 Pfam PF00672 HAMP domain 69 117 6.7E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 SUPERFAMILY SSF47384 105 187 3.53E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 283 4.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 297 4.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 4.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 339 4.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 SMART SM00388 122 188 2.7E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 123 187 2.4E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 SMART SM00304 69 121 9.4E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 Gene3D G3DSA:1.10.287.130 123 185 1.7E-18 T 12-10-2018 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 Gene3D G3DSA:1.20.1480.50 44 122 1.2E-7 T 12-10-2018 Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 SMART SM00387 232 342 4.1E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1918 eab6c5332730190d3e25ad057a904e7d 349 Gene3D G3DSA:3.30.565.10 186 340 2.1E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1206 4a9d2747c2e967985f9e2215eeeb0ff4 214 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 214 25.506 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Amet_1206 4a9d2747c2e967985f9e2215eeeb0ff4 214 Gene3D G3DSA:3.40.50.150 1 213 1.4E-59 T 12-10-2018 Amet_1206 4a9d2747c2e967985f9e2215eeeb0ff4 214 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 23 212 2.9E-50 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Amet_1206 4a9d2747c2e967985f9e2215eeeb0ff4 214 SUPERFAMILY SSF53335 28 212 7.15E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_1206 4a9d2747c2e967985f9e2215eeeb0ff4 214 Pfam PF02390 Putative methyltransferase 37 210 5.4E-41 T 12-10-2018 Amet_1869 7e97c4dd968de6e17d41d95b209de908 94 SUPERFAMILY SSF82771 2 88 6.54E-19 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amet_1869 7e97c4dd968de6e17d41d95b209de908 94 Gene3D G3DSA:3.40.1440.10 1 93 4.9E-21 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amet_1869 7e97c4dd968de6e17d41d95b209de908 94 Pfam PF01541 GIY-YIG catalytic domain 2 75 7.5E-16 T 12-10-2018 IPR000305 GIY-YIG endonuclease Amet_1869 7e97c4dd968de6e17d41d95b209de908 94 SMART SM00465 1 80 4.3E-4 T 12-10-2018 IPR000305 GIY-YIG endonuclease Amet_1637 4b2c5901299bb46a03e1b19a3528d94c 214 Gene3D G3DSA:3.40.50.720 1 136 2.6E-40 T 12-10-2018 Amet_1637 4b2c5901299bb46a03e1b19a3528d94c 214 SUPERFAMILY SSF51735 2 133 1.05E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1637 4b2c5901299bb46a03e1b19a3528d94c 214 Gene3D G3DSA:3.30.70.1450 137 214 3.2E-24 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_1637 4b2c5901299bb46a03e1b19a3528d94c 214 Pfam PF02080 TrkA-C domain 151 213 1.8E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Amet_1637 4b2c5901299bb46a03e1b19a3528d94c 214 Pfam PF02254 TrkA-N domain 4 119 1.2E-32 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Amet_1637 4b2c5901299bb46a03e1b19a3528d94c 214 SUPERFAMILY SSF116726 130 213 2.62E-18 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_4430 ce3667d85da42fd5211446877f113928 67 Pfam PF12838 4Fe-4S dicluster domain 11 59 2.2E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4430 ce3667d85da42fd5211446877f113928 67 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 11 22 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_4430 ce3667d85da42fd5211446877f113928 67 SUPERFAMILY SSF54862 4 64 1.89E-13 T 12-10-2018 Amet_4430 ce3667d85da42fd5211446877f113928 67 Gene3D G3DSA:3.30.70.20 3 67 3.9E-13 T 12-10-2018 Amet_4430 ce3667d85da42fd5211446877f113928 67 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 48 59 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_2488 f0a0017197f6ce9883b56a3f91ef2bee 61 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 28 61 3.0E-5 T 12-10-2018 Amet_2488 f0a0017197f6ce9883b56a3f91ef2bee 61 SUPERFAMILY SSF52304 10 60 1.1E-5 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Amet_1080 9549166c7abcce594b4823f5bb4cc5f1 261 Gene3D G3DSA:3.20.20.70 1 259 3.2E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1080 9549166c7abcce594b4823f5bb4cc5f1 261 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 255 9.2E-85 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Amet_1080 9549166c7abcce594b4823f5bb4cc5f1 261 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 257 34.411 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Amet_1080 9549166c7abcce594b4823f5bb4cc5f1 261 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Amet_1080 9549166c7abcce594b4823f5bb4cc5f1 261 SUPERFAMILY SSF51366 10 257 1.12E-83 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amet_0338 21cdf05c021851bf1fc882497d907f6d 149 Pfam PF02502 Ribose/Galactose Isomerase 3 140 5.5E-58 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amet_0338 21cdf05c021851bf1fc882497d907f6d 149 PIRSF PIRSF005384 1 147 6.8E-62 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amet_0338 21cdf05c021851bf1fc882497d907f6d 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 144 8.6E-56 T 12-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 Amet_0338 21cdf05c021851bf1fc882497d907f6d 149 Gene3D G3DSA:3.40.1400.10 1 147 5.9E-63 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amet_0338 21cdf05c021851bf1fc882497d907f6d 149 SUPERFAMILY SSF89623 1 144 1.44E-59 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amet_0338 21cdf05c021851bf1fc882497d907f6d 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 1.8E-59 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Amet_0339 2082f0038cc9768fb955c9cc2f12117c 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 1.6E-90 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Amet_0339 2082f0038cc9768fb955c9cc2f12117c 209 SUPERFAMILY SSF53271 4 207 6.42E-72 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_0339 2082f0038cc9768fb955c9cc2f12117c 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 47.4 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Amet_0339 2082f0038cc9768fb955c9cc2f12117c 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 2.3E-75 T 12-10-2018 Amet_0339 2082f0038cc9768fb955c9cc2f12117c 209 Gene3D G3DSA:3.40.50.2020 1 209 7.9E-84 T 12-10-2018 Amet_3806 6f207c3f3975da8ea793e0515617bc91 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 422 1.5E-45 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3806 6f207c3f3975da8ea793e0515617bc91 457 Pfam PF01554 MatE 256 410 6.1E-9 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3806 6f207c3f3975da8ea793e0515617bc91 457 Pfam PF01554 MatE 30 191 5.6E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3806 6f207c3f3975da8ea793e0515617bc91 457 PIRSF PIRSF006603 4 455 4.7E-64 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4124 818177f920b5e25039d57431f1f41526 622 Pfam PF01541 GIY-YIG catalytic domain 15 91 9.2E-13 T 12-10-2018 IPR000305 GIY-YIG endonuclease Amet_4124 818177f920b5e25039d57431f1f41526 622 SMART SM00465 14 96 9.6E-27 T 12-10-2018 IPR000305 GIY-YIG endonuclease Amet_4124 818177f920b5e25039d57431f1f41526 622 Pfam PF12826 Helix-hairpin-helix motif 572 621 9.0E-12 T 12-10-2018 Amet_4124 818177f920b5e25039d57431f1f41526 622 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 5 600 3.0E-184 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Amet_4124 818177f920b5e25039d57431f1f41526 622 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 553 2.2E-49 T 12-10-2018 IPR001162 UvrC family homology region Amet_4124 818177f920b5e25039d57431f1f41526 622 Pfam PF02151 UvrB/uvrC motif 205 233 5.9E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 Amet_4124 818177f920b5e25039d57431f1f41526 622 Gene3D G3DSA:1.10.150.20 561 619 1.4E-21 T 12-10-2018 Amet_4124 818177f920b5e25039d57431f1f41526 622 Gene3D G3DSA:3.30.420.340 381 560 1.0E-50 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily Amet_4124 818177f920b5e25039d57431f1f41526 622 SUPERFAMILY SSF82771 13 98 2.88E-27 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amet_4124 818177f920b5e25039d57431f1f41526 622 Gene3D G3DSA:3.40.1440.10 2 100 6.0E-36 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amet_4124 818177f920b5e25039d57431f1f41526 622 SUPERFAMILY SSF47781 533 621 1.59E-23 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_4124 818177f920b5e25039d57431f1f41526 622 SUPERFAMILY SSF46600 191 244 6.93E-12 T 12-10-2018 IPR036876 UVR domain superfamily Amet_4124 818177f920b5e25039d57431f1f41526 622 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 618 29.027 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Amet_4124 818177f920b5e25039d57431f1f41526 622 SMART SM00278 599 618 30.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_4124 818177f920b5e25039d57431f1f41526 622 SMART SM00278 567 586 4.4 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_2627 a17141b96c1b199c1ef3875c71c7c546 220 SUPERFAMILY SSF52540 1 215 4.7E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2627 a17141b96c1b199c1ef3875c71c7c546 220 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 212 3.5E-76 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Amet_2627 a17141b96c1b199c1ef3875c71c7c546 220 Hamap MF_00238 Cytidylate kinase [cmk]. 4 218 32.469 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Amet_2627 a17141b96c1b199c1ef3875c71c7c546 220 Gene3D G3DSA:3.40.50.300 2 218 1.6E-81 T 12-10-2018 Amet_2627 a17141b96c1b199c1ef3875c71c7c546 220 Pfam PF02224 Cytidylate kinase 6 214 3.5E-77 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Amet_0647 26458a938b47b8ce8a8b0be6c50b66a9 425 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amet_0647 26458a938b47b8ce8a8b0be6c50b66a9 425 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 424 1.1E-128 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amet_0647 26458a938b47b8ce8a8b0be6c50b66a9 425 Gene3D G3DSA:3.65.10.10 12 416 7.6E-147 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amet_0647 26458a938b47b8ce8a8b0be6c50b66a9 425 SUPERFAMILY SSF55205 2 422 6.38E-127 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Amet_0647 26458a938b47b8ce8a8b0be6c50b66a9 425 PIRSF PIRSF000505 1 425 7.6E-115 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amet_0647 26458a938b47b8ce8a8b0be6c50b66a9 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 420 1.8E-121 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Amet_0647 26458a938b47b8ce8a8b0be6c50b66a9 425 Gene3D G3DSA:3.65.10.10 20 227 7.6E-147 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amet_0647 26458a938b47b8ce8a8b0be6c50b66a9 425 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 425 32.756 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amet_0647 26458a938b47b8ce8a8b0be6c50b66a9 425 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Amet_1143 39d9387c62c9792a30f287d52f3a9129 85 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 29 79 7.9E-16 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Amet_3830 62b7519f60de1285da93c89255cc4363 106 Gene3D G3DSA:3.30.70.1710 1 106 2.8E-35 T 12-10-2018 Amet_3830 62b7519f60de1285da93c89255cc4363 106 SUPERFAMILY SSF143414 33 97 5.89E-9 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_3830 62b7519f60de1285da93c89255cc4363 106 Pfam PF00936 BMC domain 34 97 3.7E-7 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3830 62b7519f60de1285da93c89255cc4363 106 SMART SM00877 33 103 8.7E-8 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3677 636f3b1391d2dd985aa4cae9045f999f 229 SUPERFAMILY SSF56300 1 216 3.8E-25 T 12-10-2018 Amet_3677 636f3b1391d2dd985aa4cae9045f999f 229 PIRSF PIRSF033094 1 229 2.9E-100 T 12-10-2018 IPR014578 Predicted phosphoesterase, CT488 type Amet_3677 636f3b1391d2dd985aa4cae9045f999f 229 Pfam PF00149 Calcineurin-like phosphoesterase 4 195 1.8E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amet_2222 de3b2e20593b24538663dfcfa480054c 189 Pfam PF14097 Stage V sporulation protein AE1 8 186 2.7E-78 T 12-10-2018 IPR025914 Stage V sporulation protein AE Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 Gene3D G3DSA:2.40.40.20 688 846 2.7E-36 T 12-10-2018 Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 SMART SM00926 54 113 5.8E-5 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 SUPERFAMILY SSF50692 710 848 3.84E-34 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 Gene3D G3DSA:3.40.50.740 447 649 6.0E-25 T 12-10-2018 Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 756 783 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 Pfam PF01568 Molydopterin dinucleotide binding domain 720 819 2.3E-19 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 Gene3D G3DSA:3.40.228.10 340 414 6.8E-11 T 12-10-2018 Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 Pfam PF00384 Molybdopterin oxidoreductase 116 567 8.8E-58 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 SUPERFAMILY SSF53706 55 722 3.8E-147 T 12-10-2018 Amet_1330 acd52d023dfb6f20d330f0a7afe1d045 854 Gene3D G3DSA:3.40.50.740 47 320 1.1E-67 T 12-10-2018 Amet_1681 eaabfcafaaf6d2920cdddbb64fa13ce6 179 SUPERFAMILY SSF88946 3 98 1.46E-26 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1681 eaabfcafaaf6d2920cdddbb64fa13ce6 179 Pfam PF04542 Sigma-70 region 2 19 85 2.5E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1681 eaabfcafaaf6d2920cdddbb64fa13ce6 179 SUPERFAMILY SSF88659 102 168 1.46E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_1681 eaabfcafaaf6d2920cdddbb64fa13ce6 179 Gene3D G3DSA:1.10.1740.10 1 110 5.6E-28 T 12-10-2018 Amet_1681 eaabfcafaaf6d2920cdddbb64fa13ce6 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 168 7.5E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_1681 eaabfcafaaf6d2920cdddbb64fa13ce6 179 Pfam PF08281 Sigma-70, region 4 112 164 7.0E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_1681 eaabfcafaaf6d2920cdddbb64fa13ce6 179 Gene3D G3DSA:1.10.10.10 111 170 8.0E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 Gene3D G3DSA:2.10.109.10 91 206 4.6E-44 T 12-10-2018 Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 173 1.3E-7 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 133 144 1.3E-7 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 132 1.3E-7 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 Pfam PF01726 LexA DNA binding domain 3 66 1.9E-23 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 Pfam PF00717 Peptidase S24-like 125 191 1.5E-17 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 Gene3D G3DSA:1.10.10.10 4 69 2.2E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 SUPERFAMILY SSF51306 85 204 2.44E-38 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 SUPERFAMILY SSF46785 4 71 4.79E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 TIGRFAM TIGR00498 lexA: repressor LexA 3 206 8.0E-75 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Amet_2535 309df4049e72070a4950bf8fa3d6f80f 206 Hamap MF_00015 LexA repressor [lexA]. 4 206 32.683 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Amet_1269 147fab1ad9d9370d4f6ac490d52b549c 649 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 304 319 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Amet_1269 147fab1ad9d9370d4f6ac490d52b549c 649 Gene3D G3DSA:3.30.590.10 139 538 3.6E-54 T 12-10-2018 Amet_1269 147fab1ad9d9370d4f6ac490d52b549c 649 SMART SM01230 157 440 3.1E-41 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_1269 147fab1ad9d9370d4f6ac490d52b549c 649 Pfam PF00120 Glutamine synthetase, catalytic domain 177 451 4.0E-36 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Amet_1269 147fab1ad9d9370d4f6ac490d52b549c 649 SUPERFAMILY SSF55931 137 544 1.57E-58 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00690 Adhesin family signature 53 71 1.1E-39 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00690 Adhesin family signature 97 114 1.1E-39 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00690 Adhesin family signature 84 97 1.1E-39 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00690 Adhesin family signature 285 304 1.1E-39 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00690 Adhesin family signature 259 277 1.1E-39 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00690 Adhesin family signature 206 227 1.1E-39 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 Gene3D G3DSA:3.40.50.1980 208 322 1.5E-40 T 12-10-2018 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 Gene3D G3DSA:3.40.50.1980 52 207 2.8E-40 T 12-10-2018 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 SUPERFAMILY SSF53807 51 320 1.37E-74 T 12-10-2018 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 Pfam PF01297 Zinc-uptake complex component A periplasmic 56 317 7.3E-71 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00691 Adhesin B signature 53 74 3.5E-49 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00691 Adhesin B signature 277 295 3.5E-49 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00691 Adhesin B signature 97 116 3.5E-49 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00691 Adhesin B signature 298 316 3.5E-49 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00691 Adhesin B signature 78 96 3.5E-49 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00691 Adhesin B signature 206 223 3.5E-49 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00691 Adhesin B signature 232 250 3.5E-49 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_1646 f6c84c1f8dfc5f1f42799d056f911566 322 PRINTS PR00691 Adhesin B signature 255 272 3.5E-49 T 12-10-2018 IPR006129 Adhesin B GO:0007155 Amet_3604 96c777661947caeac0b73b2f8f1af62c 304 Gene3D G3DSA:3.40.50.720 4 291 9.1E-100 T 12-10-2018 Amet_3604 96c777661947caeac0b73b2f8f1af62c 304 SUPERFAMILY SSF52283 1 135 3.83E-30 T 12-10-2018 Amet_3604 96c777661947caeac0b73b2f8f1af62c 304 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 280 2.0E-52 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Amet_3604 96c777661947caeac0b73b2f8f1af62c 304 SUPERFAMILY SSF51735 101 280 1.08E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3604 96c777661947caeac0b73b2f8f1af62c 304 Gene3D G3DSA:3.40.50.720 95 282 9.1E-100 T 12-10-2018 Amet_3604 96c777661947caeac0b73b2f8f1af62c 304 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 303 9.4E-29 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Amet_2383 e9af7cc5f26afc33ae4272027497de11 782 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 491 501 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Amet_2383 e9af7cc5f26afc33ae4272027497de11 782 Gene3D G3DSA:3.40.50.200 256 553 1.8E-29 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amet_2383 e9af7cc5f26afc33ae4272027497de11 782 SUPERFAMILY SSF52743 197 530 1.02E-34 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amet_2383 e9af7cc5f26afc33ae4272027497de11 782 Pfam PF00082 Subtilase family 289 545 5.9E-26 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amet_1510 bc16ef06f5a3b6c100cf440037a7de97 216 SUPERFAMILY SSF51735 84 208 1.4E-24 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1510 bc16ef06f5a3b6c100cf440037a7de97 216 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 211 33.504 T 12-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 Amet_1510 bc16ef06f5a3b6c100cf440037a7de97 216 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 7.9E-20 T 12-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 Amet_1510 bc16ef06f5a3b6c100cf440037a7de97 216 SUPERFAMILY SSF46785 11 81 8.84E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1510 bc16ef06f5a3b6c100cf440037a7de97 216 Pfam PF02629 CoA binding domain 84 180 9.7E-21 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Amet_1510 bc16ef06f5a3b6c100cf440037a7de97 216 SMART SM00881 81 182 3.4E-14 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Amet_1510 bc16ef06f5a3b6c100cf440037a7de97 216 Gene3D G3DSA:1.10.10.10 3 78 2.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1510 bc16ef06f5a3b6c100cf440037a7de97 216 Gene3D G3DSA:3.40.50.720 79 216 1.1E-40 T 12-10-2018 Amet_2713 0eba58879ecae8dec396b4eb728d9e01 243 SUPERFAMILY SSF103088 113 233 8.63E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily Amet_2713 0eba58879ecae8dec396b4eb728d9e01 243 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 51 5.8E-21 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain Amet_2713 0eba58879ecae8dec396b4eb728d9e01 243 Pfam PF00691 OmpA family 124 227 7.8E-21 T 12-10-2018 IPR006665 OmpA-like domain Amet_2713 0eba58879ecae8dec396b4eb728d9e01 243 Gene3D G3DSA:3.30.1330.60 72 239 7.1E-47 T 12-10-2018 IPR036737 OmpA-like domain superfamily Amet_0781 73b209a98fc2896eb43200edd4e52829 648 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 130 565 2.1E-95 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_0781 73b209a98fc2896eb43200edd4e52829 648 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 640 4.2E-227 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Gene3D G3DSA:1.10.730.10 602 760 1.3E-54 T 12-10-2018 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 SUPERFAMILY SSF52374 4 628 8.23E-154 T 12-10-2018 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Gene3D G3DSA:2.30.210.10 577 591 2.2E-272 T 12-10-2018 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Gene3D G3DSA:3.10.20.590 762 824 2.6E-18 T 12-10-2018 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Pfam PF09334 tRNA synthetases class I (M) 35 180 3.5E-26 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 2.2E-55 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 PRINTS PR00985 Leucyl-tRNA synthetase signature 529 551 2.2E-55 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 PRINTS PR00985 Leucyl-tRNA synthetase signature 490 508 2.2E-55 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 2.2E-55 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 2.2E-55 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 PRINTS PR00985 Leucyl-tRNA synthetase signature 562 572 2.2E-55 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 2.2E-55 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 824 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 419 620 4.1E-26 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Pfam PF08264 Anticodon-binding domain of tRNA 661 785 8.5E-24 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 SUPERFAMILY SSF50677 224 417 1.67E-53 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 SUPERFAMILY SSF47323 623 823 4.42E-38 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 405 5.4E-74 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Gene3D G3DSA:3.90.740.10 226 417 2.2E-272 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Gene3D G3DSA:3.40.50.620 32 576 2.2E-272 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_2314 3df9f7bc328cebe5826a79b7bacd1d0e 824 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 823 23.587 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Amet_4076 612d0f488eaae188aac35f6554ea29d3 229 Gene3D G3DSA:3.40.50.300 21 224 1.3E-58 T 12-10-2018 Amet_4076 612d0f488eaae188aac35f6554ea29d3 229 Pfam PF01712 Deoxynucleoside kinase 24 222 1.0E-59 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain Amet_4076 612d0f488eaae188aac35f6554ea29d3 229 PIRSF PIRSF000705 11 228 9.1E-65 T 12-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 Amet_4076 612d0f488eaae188aac35f6554ea29d3 229 SUPERFAMILY SSF52540 21 223 9.71E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4706 6322ec81add661a23127c8e3ed03d4af 228 SMART SM00450 78 205 3.8E-7 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_4706 6322ec81add661a23127c8e3ed03d4af 228 Gene3D G3DSA:3.40.250.10 79 211 2.0E-14 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_4706 6322ec81add661a23127c8e3ed03d4af 228 SUPERFAMILY SSF52821 76 202 1.51E-14 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_4087 4c65574e17ebeabea581ef5233f2d200 239 Gene3D G3DSA:3.40.50.2300 1 129 1.3E-24 T 12-10-2018 Amet_4087 4c65574e17ebeabea581ef5233f2d200 239 Gene3D G3DSA:2.40.50.1020 130 231 1.4E-14 T 12-10-2018 Amet_4087 4c65574e17ebeabea581ef5233f2d200 239 Pfam PF04397 LytTr DNA-binding domain 141 233 2.0E-17 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_4087 4c65574e17ebeabea581ef5233f2d200 239 SMART SM00850 139 238 3.7E-25 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_4087 4c65574e17ebeabea581ef5233f2d200 239 SUPERFAMILY SSF52172 1 132 1.27E-23 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4087 4c65574e17ebeabea581ef5233f2d200 239 Pfam PF00072 Response regulator receiver domain 4 114 2.6E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4087 4c65574e17ebeabea581ef5233f2d200 239 SMART SM00448 2 116 6.6E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2933 ef41ee0a6f04472cc22b647e88b175ca 127 Pfam PF00293 NUDIX domain 1 122 3.3E-20 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amet_2933 ef41ee0a6f04472cc22b647e88b175ca 127 SUPERFAMILY SSF55811 2 125 1.76E-29 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amet_2933 ef41ee0a6f04472cc22b647e88b175ca 127 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amet_2933 ef41ee0a6f04472cc22b647e88b175ca 127 PRINTS PR00502 NUDIX hydrolase family signature 30 44 2.2E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amet_2933 ef41ee0a6f04472cc22b647e88b175ca 127 PRINTS PR00502 NUDIX hydrolase family signature 44 59 2.2E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amet_2933 ef41ee0a6f04472cc22b647e88b175ca 127 Gene3D G3DSA:3.90.79.10 2 126 3.7E-34 T 12-10-2018 Amet_1418 e0a42199ade5ff2d0e189988b7fec738 275 Gene3D G3DSA:3.60.15.10 1 275 1.0E-77 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_1418 e0a42199ade5ff2d0e189988b7fec738 275 Pfam PF00753 Metallo-beta-lactamase superfamily 22 89 9.2E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_1418 e0a42199ade5ff2d0e189988b7fec738 275 SUPERFAMILY SSF56281 7 250 7.6E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_1418 e0a42199ade5ff2d0e189988b7fec738 275 SMART SM00849 20 247 7.6E-4 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 SUPERFAMILY SSF52540 374 625 9.4E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 Pfam PF12419 SNF2 Helicase protein 238 368 1.5E-26 T 12-10-2018 IPR022138 Helicase SWF/SNF-related Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 Gene3D G3DSA:3.40.50.10810 419 626 3.1E-63 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 Pfam PF00176 SNF2 family N-terminal domain 436 694 1.0E-47 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 Gene3D G3DSA:1.20.120.850 649 873 6.8E-86 T 12-10-2018 Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 SMART SM00487 414 600 3.3E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 SMART SM00490 742 822 8.9E-18 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 SUPERFAMILY SSF52540 628 879 9.04E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 Pfam PF00271 Helicase conserved C-terminal domain 713 822 4.6E-17 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_3791 7cd59ed59ef2602eecace187fd9971b7 883 Gene3D G3DSA:3.40.50.300 635 836 6.8E-86 T 12-10-2018 Amet_2362 9e7cd2c926f314131ae63dcfc05554eb 141 PIRSF PIRSF004923 1 141 1.7E-38 T 12-10-2018 IPR026268 Protein RseC Amet_2362 9e7cd2c926f314131ae63dcfc05554eb 141 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 7 137 1.8E-32 T 12-10-2018 Amet_4060 168f9e2acbb992e239eb7a66db700545 452 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 16 442 3.9E-165 T 12-10-2018 Amet_4060 168f9e2acbb992e239eb7a66db700545 452 SUPERFAMILY SSF50249 2 59 2.34E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_4060 168f9e2acbb992e239eb7a66db700545 452 SUPERFAMILY SSF53335 67 449 9.7E-92 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_4060 168f9e2acbb992e239eb7a66db700545 452 Gene3D G3DSA:3.40.1350.30 126 281 1.3E-125 T 12-10-2018 Amet_4060 168f9e2acbb992e239eb7a66db700545 452 Gene3D G3DSA:2.40.50.140 2 78 6.3E-23 T 12-10-2018 Amet_4060 168f9e2acbb992e239eb7a66db700545 452 Pfam PF01938 TRAM domain 4 57 3.3E-12 T 12-10-2018 IPR002792 TRAM domain Amet_4060 168f9e2acbb992e239eb7a66db700545 452 Gene3D G3DSA:3.40.50.150 80 444 1.3E-125 T 12-10-2018 Amet_4060 168f9e2acbb992e239eb7a66db700545 452 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Amet_4060 168f9e2acbb992e239eb7a66db700545 452 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 88 449 3.3E-27 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Amet_4060 168f9e2acbb992e239eb7a66db700545 452 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 380 411 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site Amet_3352 635c4ef2aa11f178e5b03c1503da3ad3 232 SUPERFAMILY SSF48371 29 229 2.51E-10 T 12-10-2018 IPR016024 Armadillo-type fold Amet_3352 635c4ef2aa11f178e5b03c1503da3ad3 232 Gene3D G3DSA:1.25.10.10 24 232 4.6E-9 T 12-10-2018 IPR011989 Armadillo-like helical Amet_3702 e1ea2ac04736b0a2c65d6fea850bcd9c 461 SUPERFAMILY SSF53686 4 322 6.86E-38 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_3702 e1ea2ac04736b0a2c65d6fea850bcd9c 461 Gene3D G3DSA:3.40.50.1100 9 315 2.0E-35 T 12-10-2018 Amet_3702 e1ea2ac04736b0a2c65d6fea850bcd9c 461 Gene3D G3DSA:3.40.630.30 321 461 8.7E-18 T 12-10-2018 Amet_3702 e1ea2ac04736b0a2c65d6fea850bcd9c 461 SUPERFAMILY SSF55729 347 452 5.6E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_3702 e1ea2ac04736b0a2c65d6fea850bcd9c 461 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 314 9.6E-29 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_3702 e1ea2ac04736b0a2c65d6fea850bcd9c 461 Pfam PF00583 Acetyltransferase (GNAT) family 344 448 7.1E-13 T 12-10-2018 IPR000182 GNAT domain Amet_3702 e1ea2ac04736b0a2c65d6fea850bcd9c 461 Gene3D G3DSA:3.40.50.1100 43 141 2.0E-35 T 12-10-2018 Amet_2208 3a074924941e5a2d48518b2f9f5f0e64 168 SUPERFAMILY SSF53218 2 154 1.22E-48 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_2208 3a074924941e5a2d48518b2f9f5f0e64 168 SMART SM00852 5 149 3.5E-31 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_2208 3a074924941e5a2d48518b2f9f5f0e64 168 Pfam PF00994 Probable molybdopterin binding domain 5 148 1.6E-38 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_2208 3a074924941e5a2d48518b2f9f5f0e64 168 Gene3D G3DSA:3.40.980.10 1 168 2.3E-59 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_2208 3a074924941e5a2d48518b2f9f5f0e64 168 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 143 6.6E-39 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_0870 0a3cf8ebfc27c5fb636cbe92d439a08f 512 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 38 502 4.1E-187 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_0870 0a3cf8ebfc27c5fb636cbe92d439a08f 512 PIRSF PIRSF005690 23 512 2.2E-180 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_2179 c4e1a4f126c24715a6a4c6a83d949cbf 217 Pfam PF02096 60Kd inner membrane protein 22 207 2.4E-61 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amet_2179 c4e1a4f126c24715a6a4c6a83d949cbf 217 PRINTS PR01900 YidC translocation/secretion protein signature 7 23 1.2E-7 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amet_2179 c4e1a4f126c24715a6a4c6a83d949cbf 217 PRINTS PR01900 YidC translocation/secretion protein signature 162 186 1.2E-7 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amet_2179 c4e1a4f126c24715a6a4c6a83d949cbf 217 PRINTS PR01900 YidC translocation/secretion protein signature 140 155 1.2E-7 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Amet_2179 c4e1a4f126c24715a6a4c6a83d949cbf 217 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 21 207 9.2E-63 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 Gene3D G3DSA:3.30.1490.100 238 340 2.7E-25 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 Gene3D G3DSA:1.10.150.20 164 225 4.2E-15 T 12-10-2018 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 Gene3D G3DSA:3.30.70.270 72 162 8.5E-32 T 12-10-2018 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 SUPERFAMILY SSF100879 238 346 4.71E-24 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 Pfam PF00817 impB/mucB/samB family 8 151 1.3E-50 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 Gene3D G3DSA:2.30.40.20 13 71 9.0E-29 T 12-10-2018 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 Pfam PF11799 impB/mucB/samB family C-terminal domain 234 337 4.1E-16 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 SUPERFAMILY SSF56672 3 231 1.07E-85 T 12-10-2018 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 Pfam PF11798 IMS family HHH motif 164 194 1.2E-6 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Amet_4216 aefc8f908414347f7ff9c94573b18de9 367 Hamap MF_01113 DNA polymerase IV [dinB]. 2 346 37.095 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Amet_1613 69ef594d6c32aa9270310d27302c2920 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 163 174 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_1613 69ef594d6c32aa9270310d27302c2920 231 Gene3D G3DSA:3.30.70.3270 135 231 2.0E-6 T 12-10-2018 Amet_1613 69ef594d6c32aa9270310d27302c2920 231 SUPERFAMILY SSF54862 160 227 4.33E-7 T 12-10-2018 Amet_1673 93c053d8f41241db3123fc663e7da109 275 Gene3D G3DSA:3.40.190.10 44 257 5.9E-68 T 12-10-2018 Amet_1673 93c053d8f41241db3123fc663e7da109 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 259 5.7E-52 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amet_1673 93c053d8f41241db3123fc663e7da109 275 SUPERFAMILY SSF53850 14 260 2.93E-57 T 12-10-2018 Amet_1673 93c053d8f41241db3123fc663e7da109 275 Gene3D G3DSA:3.40.190.10 137 228 5.9E-68 T 12-10-2018 Amet_1673 93c053d8f41241db3123fc663e7da109 275 SMART SM00062 46 266 3.4E-40 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amet_1673 93c053d8f41241db3123fc663e7da109 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 72 85 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 SUPERFAMILY SSF46785 4 66 2.51E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Gene3D G3DSA:3.40.930.10 554 694 1.1E-17 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 SUPERFAMILY SSF52794 432 514 5.75E-9 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Gene3D G3DSA:1.10.10.10 79 154 8.5E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Gene3D G3DSA:1.10.10.10 1 68 5.6E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 561 690 4.1E-21 T 12-10-2018 IPR002178 PTS EIIA type-2 domain Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Gene3D G3DSA:3.40.50.2300 432 520 2.9E-15 T 12-10-2018 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Pfam PF00874 PRD domain 331 419 1.5E-23 T 12-10-2018 IPR011608 PRD domain GO:0006355 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Pfam PF00874 PRD domain 220 305 3.5E-18 T 12-10-2018 IPR011608 PRD domain GO:0006355 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 SUPERFAMILY SSF63520 203 309 5.75E-22 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 SUPERFAMILY SSF63520 322 424 4.71E-24 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Pfam PF08279 HTH domain 97 150 1.6E-5 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Pfam PF08279 HTH domain 9 66 5.3E-6 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 SUPERFAMILY SSF55804 556 692 2.09E-17 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Gene3D G3DSA:1.10.1790.10 322 422 2.0E-26 T 12-10-2018 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 Gene3D G3DSA:1.10.1790.10 208 309 5.2E-21 T 12-10-2018 Amet_4270 6f0c6ec5a32b074197830e9c8cfcd2d3 705 SUPERFAMILY SSF46785 92 156 4.16E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2317 dfff7f2535d1487ba13042cef896befa 222 Pfam PF01842 ACT domain 149 211 2.2E-10 T 12-10-2018 IPR002912 ACT domain Amet_2317 dfff7f2535d1487ba13042cef896befa 222 Gene3D G3DSA:3.30.1330.90 14 138 8.4E-20 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Amet_2317 dfff7f2535d1487ba13042cef896befa 222 Gene3D G3DSA:3.30.70.260 148 221 1.8E-14 T 12-10-2018 Amet_2317 dfff7f2535d1487ba13042cef896befa 222 Pfam PF03315 Serine dehydratase beta chain 15 87 1.2E-12 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Amet_2317 dfff7f2535d1487ba13042cef896befa 222 SUPERFAMILY SSF143548 19 138 1.28E-31 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Amet_2317 dfff7f2535d1487ba13042cef896befa 222 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 203 3.7E-73 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Amet_2317 dfff7f2535d1487ba13042cef896befa 222 SUPERFAMILY SSF55021 138 218 9.99E-17 T 12-10-2018 Amet_2317 dfff7f2535d1487ba13042cef896befa 222 PIRSF PIRSF036692 1 221 1.9E-93 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Amet_3817 bd6ffbc436249d539fd13d8462712964 161 Pfam PF01797 Transposase IS200 like 39 157 1.2E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_3817 bd6ffbc436249d539fd13d8462712964 161 SUPERFAMILY SSF143422 29 158 5.76E-44 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3817 bd6ffbc436249d539fd13d8462712964 161 Gene3D G3DSA:3.30.70.1290 26 161 8.2E-39 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3817 bd6ffbc436249d539fd13d8462712964 161 SMART SM01321 38 157 1.8E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_3395 bd6ffbc436249d539fd13d8462712964 161 Pfam PF01797 Transposase IS200 like 39 157 1.2E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_3395 bd6ffbc436249d539fd13d8462712964 161 SUPERFAMILY SSF143422 29 158 5.76E-44 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3395 bd6ffbc436249d539fd13d8462712964 161 Gene3D G3DSA:3.30.70.1290 26 161 8.2E-39 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3395 bd6ffbc436249d539fd13d8462712964 161 SMART SM01321 38 157 1.8E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_3613 02f32f5994d9033977b66e32cb116992 135 Gene3D G3DSA:3.30.1490.190 84 135 1.7E-11 T 12-10-2018 Amet_3613 02f32f5994d9033977b66e32cb116992 135 Pfam PF01475 Ferric uptake regulator family 11 126 4.8E-29 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Amet_3613 02f32f5994d9033977b66e32cb116992 135 SUPERFAMILY SSF46785 4 132 1.14E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3613 02f32f5994d9033977b66e32cb116992 135 Gene3D G3DSA:1.10.10.10 1 81 3.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2078 f902a9a9cb2464eecc8fb8e64496ac2d 240 Gene3D G3DSA:3.40.50.300 1 234 2.3E-62 T 12-10-2018 Amet_2078 f902a9a9cb2464eecc8fb8e64496ac2d 240 PIRSF PIRSF039137 1 234 2.0E-108 T 12-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Amet_2078 f902a9a9cb2464eecc8fb8e64496ac2d 240 Pfam PF00005 ABC transporter 17 161 8.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2078 f902a9a9cb2464eecc8fb8e64496ac2d 240 SUPERFAMILY SSF52540 2 232 4.99E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2078 f902a9a9cb2464eecc8fb8e64496ac2d 240 SMART SM00382 26 212 1.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1135 eced98a66dfb19d499261bea3150f505 267 Pfam PF00005 ABC transporter 28 175 3.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1135 eced98a66dfb19d499261bea3150f505 267 Gene3D G3DSA:3.40.50.300 1 266 5.2E-73 T 12-10-2018 Amet_1135 eced98a66dfb19d499261bea3150f505 267 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1135 eced98a66dfb19d499261bea3150f505 267 SUPERFAMILY SSF52540 2 245 2.15E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1135 eced98a66dfb19d499261bea3150f505 267 SMART SM00382 36 225 2.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2755 e17e36a65021355617b198e9679bbefc 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 2.6E-5 T 12-10-2018 Amet_2755 e17e36a65021355617b198e9679bbefc 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 4.4E-69 T 12-10-2018 Amet_2755 e17e36a65021355617b198e9679bbefc 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 246 1.7E-107 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Amet_2755 e17e36a65021355617b198e9679bbefc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.0E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_2755 e17e36a65021355617b198e9679bbefc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.0E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_2755 e17e36a65021355617b198e9679bbefc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.0E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_2755 e17e36a65021355617b198e9679bbefc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.0E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_2755 e17e36a65021355617b198e9679bbefc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.0E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_2755 e17e36a65021355617b198e9679bbefc 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_2755 e17e36a65021355617b198e9679bbefc 248 Gene3D G3DSA:3.40.50.720 2 248 3.4E-93 T 12-10-2018 Amet_2755 e17e36a65021355617b198e9679bbefc 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amet_2755 e17e36a65021355617b198e9679bbefc 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_2755 e17e36a65021355617b198e9679bbefc 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_2755 e17e36a65021355617b198e9679bbefc 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_2755 e17e36a65021355617b198e9679bbefc 248 SUPERFAMILY SSF51735 5 248 1.51E-93 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 Gene3D G3DSA:3.40.50.300 112 277 3.5E-104 T 12-10-2018 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 6 531 49.459 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 Pfam PF00009 Elongation factor Tu GTP binding domain 14 277 4.7E-52 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 150 3.0E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 SUPERFAMILY SSF50447 263 391 1.19E-25 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 SUPERFAMILY SSF54980 395 468 2.12E-15 T 12-10-2018 IPR035647 EF-G domain III/V-like Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 8 530 3.8E-211 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 Gene3D G3DSA:3.30.70.3280 393 532 2.1E-45 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 Gene3D G3DSA:3.40.50.300 74 381 3.5E-104 T 12-10-2018 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 PRINTS PR00315 GTP-binding elongation factor signature 17 30 2.8E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 PRINTS PR00315 GTP-binding elongation factor signature 67 75 2.8E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 PRINTS PR00315 GTP-binding elongation factor signature 139 148 2.8E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 PRINTS PR00315 GTP-binding elongation factor signature 87 97 2.8E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 PRINTS PR00315 GTP-binding elongation factor signature 103 114 2.8E-12 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 60 75 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 Pfam PF16658 Class II release factor RF3, C-terminal domain 390 518 2.0E-47 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Amet_3692 9408f95f2f7c358fc74f2b1996130981 536 SUPERFAMILY SSF52540 12 277 2.62E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3707 1b51887b29615ed46aa79c2e060cff3e 385 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 384 1.6E-151 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_3707 1b51887b29615ed46aa79c2e060cff3e 385 SUPERFAMILY SSF53383 13 385 1.38E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3707 1b51887b29615ed46aa79c2e060cff3e 385 Gene3D G3DSA:3.40.640.10 9 253 2.5E-92 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3707 1b51887b29615ed46aa79c2e060cff3e 385 Gene3D G3DSA:3.90.1150.10 254 385 3.1E-47 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3707 1b51887b29615ed46aa79c2e060cff3e 385 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 195 209 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_3707 1b51887b29615ed46aa79c2e060cff3e 385 PIRSF PIRSF001434 3 385 4.0E-142 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_0464 4ce6b14e84aa0f94994cd5d801cb4b1b 349 Gene3D G3DSA:3.40.50.10210 57 330 5.8E-130 T 12-10-2018 Amet_0464 4ce6b14e84aa0f94994cd5d801cb4b1b 349 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 347 1.8E-127 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amet_0464 4ce6b14e84aa0f94994cd5d801cb4b1b 349 Pfam PF02277 Phosphoribosyltransferase 11 347 4.9E-128 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amet_0464 4ce6b14e84aa0f94994cd5d801cb4b1b 349 SUPERFAMILY SSF52733 5 348 1.12E-113 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amet_0464 4ce6b14e84aa0f94994cd5d801cb4b1b 349 Gene3D G3DSA:1.10.1610.10 11 339 5.8E-130 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amet_0464 4ce6b14e84aa0f94994cd5d801cb4b1b 349 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 349 33.934 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Amet_0682 a727db039de18377ef5ab8c598315df5 159 Gene3D G3DSA:3.10.20.30 4 79 2.4E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_0682 a727db039de18377ef5ab8c598315df5 159 Gene3D G3DSA:1.10.150.120 80 159 1.5E-30 T 12-10-2018 Amet_0682 a727db039de18377ef5ab8c598315df5 159 Pfam PF01799 [2Fe-2S] binding domain 78 150 1.6E-28 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Amet_0682 a727db039de18377ef5ab8c598315df5 159 SUPERFAMILY SSF47741 89 155 3.27E-29 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Amet_0682 a727db039de18377ef5ab8c598315df5 159 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 61 9.7E-6 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amet_0682 a727db039de18377ef5ab8c598315df5 159 SUPERFAMILY SSF54292 6 83 3.28E-23 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_0682 a727db039de18377ef5ab8c598315df5 159 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 44 52 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Amet_2008 bba095921b16f2753e281ed33c5b3813 262 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 258 2.2E-6 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2008 bba095921b16f2753e281ed33c5b3813 262 Gene3D G3DSA:3.40.50.300 1 261 7.5E-78 T 12-10-2018 Amet_2008 bba095921b16f2753e281ed33c5b3813 262 SMART SM00382 28 227 5.4E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2008 bba095921b16f2753e281ed33c5b3813 262 SUPERFAMILY SSF52540 4 253 3.55E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2008 bba095921b16f2753e281ed33c5b3813 262 Pfam PF00005 ABC transporter 19 178 3.7E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4468 e03778348e3affdb9ffe8ce9e5f3d425 122 SMART SM01374 1 122 2.6E-86 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Amet_4468 e03778348e3affdb9ffe8ce9e5f3d425 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.189 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Amet_4468 e03778348e3affdb9ffe8ce9e5f3d425 122 Gene3D G3DSA:2.40.150.20 1 122 3.8E-53 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Amet_4468 e03778348e3affdb9ffe8ce9e5f3d425 122 SUPERFAMILY SSF50193 1 122 5.89E-51 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Amet_4468 e03778348e3affdb9ffe8ce9e5f3d425 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4468 e03778348e3affdb9ffe8ce9e5f3d425 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.3E-55 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Amet_4468 e03778348e3affdb9ffe8ce9e5f3d425 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.4E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Amet_1459 f0bfd281e74bc433ca645092db7f039f 252 Pfam PF00005 ABC transporter 25 173 8.6E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1459 f0bfd281e74bc433ca645092db7f039f 252 Gene3D G3DSA:3.40.50.300 1 247 1.2E-62 T 12-10-2018 Amet_1459 f0bfd281e74bc433ca645092db7f039f 252 SMART SM00382 34 222 2.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1459 f0bfd281e74bc433ca645092db7f039f 252 SUPERFAMILY SSF52540 3 226 1.3E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0420 956c38ca573948b6f77bcc6e69917f26 304 Gene3D G3DSA:3.30.2400.30 8 143 1.1E-12 T 12-10-2018 Amet_0420 956c38ca573948b6f77bcc6e69917f26 304 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 60 304 9.3E-72 T 12-10-2018 IPR020049 Protein of unknown function DUF2184 Amet_0420 956c38ca573948b6f77bcc6e69917f26 304 Gene3D G3DSA:3.30.2320.10 144 208 1.1E-12 T 12-10-2018 Amet_0420 956c38ca573948b6f77bcc6e69917f26 304 PIRSF PIRSF029202 1 304 1.8E-63 T 12-10-2018 IPR020049 Protein of unknown function DUF2184 Amet_4361 956c38ca573948b6f77bcc6e69917f26 304 Gene3D G3DSA:3.30.2400.30 8 143 1.1E-12 T 12-10-2018 Amet_4361 956c38ca573948b6f77bcc6e69917f26 304 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 60 304 9.3E-72 T 12-10-2018 IPR020049 Protein of unknown function DUF2184 Amet_4361 956c38ca573948b6f77bcc6e69917f26 304 Gene3D G3DSA:3.30.2320.10 144 208 1.1E-12 T 12-10-2018 Amet_4361 956c38ca573948b6f77bcc6e69917f26 304 PIRSF PIRSF029202 1 304 1.8E-63 T 12-10-2018 IPR020049 Protein of unknown function DUF2184 Amet_1957 956c38ca573948b6f77bcc6e69917f26 304 Gene3D G3DSA:3.30.2400.30 8 143 1.1E-12 T 12-10-2018 Amet_1957 956c38ca573948b6f77bcc6e69917f26 304 Pfam PF09950 Uncharacterized protein conserved in bacteria (DUF2184) 60 304 9.3E-72 T 12-10-2018 IPR020049 Protein of unknown function DUF2184 Amet_1957 956c38ca573948b6f77bcc6e69917f26 304 Gene3D G3DSA:3.30.2320.10 144 208 1.1E-12 T 12-10-2018 Amet_1957 956c38ca573948b6f77bcc6e69917f26 304 PIRSF PIRSF029202 1 304 1.8E-63 T 12-10-2018 IPR020049 Protein of unknown function DUF2184 Amet_4295 a5a85788a78865043d24b473e66591e3 206 Pfam PF13649 Methyltransferase domain 58 148 7.3E-11 T 12-10-2018 Amet_4295 a5a85788a78865043d24b473e66591e3 206 SUPERFAMILY SSF53335 27 191 1.86E-24 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_4295 a5a85788a78865043d24b473e66591e3 206 Gene3D G3DSA:3.40.50.150 23 204 6.3E-27 T 12-10-2018 Amet_2288 c54feeb6fd92ddf8faae14d58863f24f 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 183 2.0E-58 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Amet_2288 c54feeb6fd92ddf8faae14d58863f24f 192 PIRSF PIRSF006305 1 190 1.2E-59 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Amet_2288 c54feeb6fd92ddf8faae14d58863f24f 192 Hamap MF_00528 Septum formation protein Maf [maf]. 3 190 29.748 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Amet_2288 c54feeb6fd92ddf8faae14d58863f24f 192 SUPERFAMILY SSF52972 2 184 8.5E-62 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Amet_2288 c54feeb6fd92ddf8faae14d58863f24f 192 Gene3D G3DSA:3.90.950.10 2 191 8.5E-69 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Amet_2288 c54feeb6fd92ddf8faae14d58863f24f 192 Pfam PF02545 Maf-like protein 3 185 1.6E-59 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 Pfam PF00347 Ribosomal protein L6 91 165 4.7E-22 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 Pfam PF00347 Ribosomal protein L6 11 83 6.7E-21 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 2.2E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 2.2E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 2.2E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 9.6E-77 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 PIRSF PIRSF002162 1 178 7.1E-51 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 SUPERFAMILY SSF56053 84 178 2.68E-38 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 SUPERFAMILY SSF56053 1 83 8.46E-24 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 Gene3D G3DSA:3.90.930.12 1 83 6.5E-29 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 39.417 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 Gene3D G3DSA:3.90.930.12 84 179 9.8E-43 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4463 6cdfb30672dd569ec5ede1060c12048c 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 SUPERFAMILY SSF158472 184 234 5.1E-9 T 12-10-2018 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.6E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 3.6E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 3.6E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 SMART SM00304 183 235 1.8E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 317 5.3E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 Gene3D G3DSA:3.30.565.10 322 470 2.6E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 467 2.4E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 SUPERFAMILY SSF47384 235 318 1.67E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 Gene3D G3DSA:1.10.287.130 242 321 2.7E-24 T 12-10-2018 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 SMART SM00387 363 470 3.9E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 SUPERFAMILY SSF55874 307 468 1.96E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 Gene3D G3DSA:1.20.1480.50 149 241 7.0E-15 T 12-10-2018 Amet_3208 3b4e3a631f5df0de7cf2f318b6d07294 474 SMART SM00388 250 317 5.6E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1931 b5a738de160f1247375a1a5ee7127cc3 79 SUPERFAMILY SSF89447 1 48 2.27E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Amet_1931 b5a738de160f1247375a1a5ee7127cc3 79 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 4 44 1.4E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_1931 b5a738de160f1247375a1a5ee7127cc3 79 Gene3D G3DSA:2.10.260.10 2 51 1.0E-8 T 12-10-2018 Amet_1931 b5a738de160f1247375a1a5ee7127cc3 79 SMART SM00966 4 47 3.5E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_0127 a1555b1d1e16a7d0d42c4e062f59f33b 257 SUPERFAMILY SSF143422 1 129 7.72E-24 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0127 a1555b1d1e16a7d0d42c4e062f59f33b 257 Pfam PF01797 Transposase IS200 like 13 123 6.0E-15 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_0127 a1555b1d1e16a7d0d42c4e062f59f33b 257 Gene3D G3DSA:3.30.70.1290 1 162 5.2E-45 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0127 a1555b1d1e16a7d0d42c4e062f59f33b 257 SMART SM01321 9 123 6.5E-37 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_1994 7174ae81290c92891021048550d64748 581 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 86 332 5.2E-68 T 12-10-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 Amet_1994 7174ae81290c92891021048550d64748 581 Pfam PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 297 364 5.6E-12 T 12-10-2018 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 SMART SM00387 469 578 5.2E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1916 c73a431c404c002979bc56c220d8bcec 578 SUPERFAMILY SSF47384 345 425 3.92E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 SMART SM00388 360 425 5.6E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 SUPERFAMILY SSF55874 415 576 1.57E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1916 c73a431c404c002979bc56c220d8bcec 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 575 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 Gene3D G3DSA:3.30.565.10 425 576 1.4E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1916 c73a431c404c002979bc56c220d8bcec 578 SMART SM00304 293 345 9.9E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 SUPERFAMILY SSF158472 294 344 1.44E-7 T 12-10-2018 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 Gene3D G3DSA:1.10.287.130 352 424 5.3E-18 T 12-10-2018 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 Pfam PF00512 His Kinase A (phospho-acceptor) domain 361 425 2.2E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1916 c73a431c404c002979bc56c220d8bcec 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 575 2.8E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1916 c73a431c404c002979bc56c220d8bcec 578 Gene3D G3DSA:1.20.1480.50 254 351 5.8E-10 T 12-10-2018 Amet_0248 85e4d926c5136886bf55d77b7938ccaf 288 SUPERFAMILY SSF103039 168 279 8.37E-19 T 12-10-2018 IPR028976 CheC-like superfamily Amet_0248 85e4d926c5136886bf55d77b7938ccaf 288 SUPERFAMILY SSF52172 1 122 4.55E-33 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0248 85e4d926c5136886bf55d77b7938ccaf 288 Pfam PF13690 Chemotaxis phosphatase CheX 170 257 2.2E-13 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Amet_0248 85e4d926c5136886bf55d77b7938ccaf 288 Gene3D G3DSA:3.40.1550.10 137 280 3.8E-20 T 12-10-2018 IPR028976 CheC-like superfamily Amet_0248 85e4d926c5136886bf55d77b7938ccaf 288 SMART SM00448 4 116 4.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0248 85e4d926c5136886bf55d77b7938ccaf 288 Pfam PF00072 Response regulator receiver domain 6 116 5.3E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0248 85e4d926c5136886bf55d77b7938ccaf 288 Gene3D G3DSA:3.40.50.2300 1 136 2.2E-33 T 12-10-2018 Amet_2899 9d9d652f1fc2816d76e59612bfc7452d 602 Gene3D G3DSA:3.30.450.40 182 342 5.1E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_2899 9d9d652f1fc2816d76e59612bfc7452d 602 Gene3D G3DSA:3.30.450.40 3 180 1.2E-16 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_2899 9d9d652f1fc2816d76e59612bfc7452d 602 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 398 591 1.2E-34 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_2899 9d9d652f1fc2816d76e59612bfc7452d 602 SUPERFAMILY SSF55781 42 172 4.8E-15 T 12-10-2018 Amet_2899 9d9d652f1fc2816d76e59612bfc7452d 602 SMART SM00331 371 592 7.2E-26 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_2899 9d9d652f1fc2816d76e59612bfc7452d 602 SUPERFAMILY SSF55781 191 341 8.07E-9 T 12-10-2018 Amet_2899 9d9d652f1fc2816d76e59612bfc7452d 602 Pfam PF13185 GAF domain 70 172 2.5E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_2899 9d9d652f1fc2816d76e59612bfc7452d 602 Gene3D G3DSA:3.60.40.10 343 593 9.4E-50 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_3836 4333897e2e260cd4622fa6d5b7ebac35 845 Pfam PF02901 Pyruvate formate lyase-like 58 706 3.8E-234 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Amet_3836 4333897e2e260cd4622fa6d5b7ebac35 845 Hamap MF_02058 Choline trimethylamine-lyase [cutC]. 53 845 57.409 T 12-10-2018 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 Amet_3836 4333897e2e260cd4622fa6d5b7ebac35 845 ProSitePatterns PS00850 Glycine radical domain signature. 815 823 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Amet_3836 4333897e2e260cd4622fa6d5b7ebac35 845 Gene3D G3DSA:3.20.70.40 45 844 0.0 T 12-10-2018 Amet_3836 4333897e2e260cd4622fa6d5b7ebac35 845 TIGRFAM TIGR04394 choline_CutC: choline trimethylamine-lyase 57 845 0.0 T 12-10-2018 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 Amet_3836 4333897e2e260cd4622fa6d5b7ebac35 845 SUPERFAMILY SSF51998 56 841 2.69E-236 T 12-10-2018 Amet_3836 4333897e2e260cd4622fa6d5b7ebac35 845 Pfam PF01228 Glycine radical 723 826 2.6E-26 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 Amet_3487 f1de3d5729d79d8395cf439943e2a4c8 441 SUPERFAMILY SSF102114 182 385 5.36E-23 T 12-10-2018 Amet_3487 f1de3d5729d79d8395cf439943e2a4c8 441 Pfam PF02310 B12 binding domain 22 126 1.1E-7 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_3487 f1de3d5729d79d8395cf439943e2a4c8 441 SMART SM00729 186 395 2.6E-20 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_3487 f1de3d5729d79d8395cf439943e2a4c8 441 Gene3D G3DSA:3.80.30.20 184 391 1.8E-14 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_3487 f1de3d5729d79d8395cf439943e2a4c8 441 Pfam PF04055 Radical SAM superfamily 194 346 9.9E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 418 2.0E-161 T 12-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 Gene3D G3DSA:3.30.499.10 273 419 1.3E-59 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 419 50.087 T 12-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 417 3.0E-177 T 12-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 ProSitePatterns PS01244 Aconitase family signature 2. 352 365 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 SUPERFAMILY SSF53732 1 417 3.27E-145 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 PRINTS PR00415 Aconitase family signature 190 203 1.8E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 PRINTS PR00415 Aconitase family signature 204 217 1.8E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 PRINTS PR00415 Aconitase family signature 352 365 1.8E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 PRINTS PR00415 Aconitase family signature 114 127 1.8E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 PRINTS PR00415 Aconitase family signature 128 143 1.8E-16 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 Pfam PF00330 Aconitase family (aconitate hydratase) 8 411 1.7E-94 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 3 419 1.9E-222 T 12-10-2018 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 Gene3D G3DSA:3.30.499.20 4 270 2.0E-95 T 12-10-2018 Amet_3457 b28076e5aa52354e87da4f8f0b2a1956 420 ProSitePatterns PS00450 Aconitase family signature 1. 292 308 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Amet_3037 be5c5cff31bcf2308116e456a96314b7 329 Pfam PF12127 SigmaW regulon antibacterial 8 318 5.4E-165 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity Amet_3037 be5c5cff31bcf2308116e456a96314b7 329 Hamap MF_01562 UPF0365 protein . 2 322 47.073 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 SMART SM00283 350 660 3.9E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 Pfam PF02743 Cache domain 35 266 2.9E-37 T 12-10-2018 IPR033479 Double Cache domain 1 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 Gene3D G3DSA:1.10.287.950 386 660 6.9E-65 T 12-10-2018 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 Gene3D G3DSA:1.10.287.130 302 383 1.0E-8 T 12-10-2018 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 450 613 2.1E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 Gene3D G3DSA:3.30.450.20 183 270 2.4E-41 T 12-10-2018 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 SUPERFAMILY SSF103190 91 191 6.67E-14 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 Pfam PF00672 HAMP domain 306 351 2.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 SMART SM00304 304 356 6.7E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 SMART SM00304 580 657 17.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 Gene3D G3DSA:3.30.450.20 92 182 2.4E-41 T 12-10-2018 Amet_4638 c203794ce8d8726617f3f9d5e3c580d2 661 SUPERFAMILY SSF58104 324 660 3.66E-68 T 12-10-2018 Amet_2376 658c317b55ac05a5314d1004938ff44d 351 SUPERFAMILY SSF89372 13 277 5.75E-6 T 12-10-2018 Amet_2989 49fb2190e7cbc6734d7873e228bdab20 135 Gene3D G3DSA:3.30.420.10 5 135 1.4E-42 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_2989 49fb2190e7cbc6734d7873e228bdab20 135 SUPERFAMILY SSF53098 5 129 6.32E-33 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2989 49fb2190e7cbc6734d7873e228bdab20 135 Pfam PF13456 Reverse transcriptase-like 10 130 2.7E-28 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Amet_2877 ae4924e7821db15e92ea46a9f086223e 262 Pfam PF03799 Cell division protein FtsQ 122 245 8.9E-7 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB Amet_2877 ae4924e7821db15e92ea46a9f086223e 262 Pfam PF08478 POTRA domain, FtsQ-type 45 112 4.3E-17 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type Amet_2877 ae4924e7821db15e92ea46a9f086223e 262 Gene3D G3DSA:3.10.20.310 44 111 2.0E-8 T 12-10-2018 Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 Pfam PF02195 ParB-like nuclease domain 5 93 2.3E-9 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 PIRSF PIRSF036758 1 394 2.8E-154 T 12-10-2018 IPR015840 DNA methyase, ParB domain-containing Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 193 199 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 341 359 2.0E-13 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 322 339 2.0E-13 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 189 203 2.0E-13 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 364 384 2.0E-13 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 Gene3D G3DSA:3.40.50.150 160 394 6.5E-45 T 12-10-2018 Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 SMART SM00470 4 94 3.2E-4 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 Gene3D G3DSA:3.90.1530.10 1 95 5.6E-6 T 12-10-2018 Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 SUPERFAMILY SSF110849 1 114 7.5E-16 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 Pfam PF01555 DNA methylase 191 380 3.0E-25 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Amet_4039 7e5c869cb5234cea45c22cba0b3ff511 411 SUPERFAMILY SSF53335 158 391 9.49E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 SMART SM00871 128 288 7.3E-36 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 SUPERFAMILY SSF55136 128 289 1.44E-30 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 SMART SM00342 21 104 3.4E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 Gene3D G3DSA:1.10.10.60 58 117 2.1E-13 T 12-10-2018 Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 Gene3D G3DSA:3.20.80.10 128 292 3.1E-41 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 SUPERFAMILY SSF46689 57 109 1.16E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 Pfam PF06445 GyrI-like small molecule binding domain 128 287 3.1E-29 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 Gene3D G3DSA:1.10.10.60 2 57 3.5E-13 T 12-10-2018 Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 Pfam PF12833 Helix-turn-helix domain 28 102 7.0E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_1504 a35bcaa69101d10e10fb2f915fa35bc7 293 SUPERFAMILY SSF46689 5 55 5.38E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4723 c84dc12bcd033170c0178ab3a0af8063 391 Pfam PF07690 Major Facilitator Superfamily 12 238 2.0E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_4723 c84dc12bcd033170c0178ab3a0af8063 391 SUPERFAMILY SSF103473 8 379 2.75E-55 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_4723 c84dc12bcd033170c0178ab3a0af8063 391 Gene3D G3DSA:1.20.1250.20 3 383 7.8E-50 T 12-10-2018 Amet_2009 5b9bfa0468f1c46f072516ace0838d27 339 SMART SM00382 37 238 5.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2009 5b9bfa0468f1c46f072516ace0838d27 339 Gene3D G3DSA:3.40.50.300 5 328 2.8E-86 T 12-10-2018 Amet_2009 5b9bfa0468f1c46f072516ace0838d27 339 SUPERFAMILY SSF52540 7 251 6.18E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2009 5b9bfa0468f1c46f072516ace0838d27 339 Pfam PF00005 ABC transporter 28 179 5.8E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2009 5b9bfa0468f1c46f072516ace0838d27 339 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 315 2.4E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2009 5b9bfa0468f1c46f072516ace0838d27 339 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2009 5b9bfa0468f1c46f072516ace0838d27 339 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 296 5.1E-13 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_3401 2dd1daa7306f59c615c5cdd8444317bc 552 SUPERFAMILY SSF52016 372 551 3.61E-65 T 12-10-2018 Amet_3401 2dd1daa7306f59c615c5cdd8444317bc 552 Pfam PF00920 Dehydratase family 32 549 8.7E-229 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3401 2dd1daa7306f59c615c5cdd8444317bc 552 SUPERFAMILY SSF143975 7 371 1.16E-140 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3401 2dd1daa7306f59c615c5cdd8444317bc 552 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 460 471 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3401 2dd1daa7306f59c615c5cdd8444317bc 552 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 552 1.4E-243 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3401 2dd1daa7306f59c615c5cdd8444317bc 552 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 552 47.884 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3401 2dd1daa7306f59c615c5cdd8444317bc 552 Gene3D G3DSA:3.50.30.80 372 523 6.6E-58 T 12-10-2018 Amet_3401 2dd1daa7306f59c615c5cdd8444317bc 552 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_2453 367c29c020a23c7f54cc687d11e235d8 395 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 5 384 2.5E-180 T 12-10-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Amet_2453 367c29c020a23c7f54cc687d11e235d8 395 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 393 53.842 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Amet_2453 367c29c020a23c7f54cc687d11e235d8 395 Gene3D G3DSA:3.90.1150.10 5 374 6.9E-155 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_2453 367c29c020a23c7f54cc687d11e235d8 395 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Amet_2453 367c29c020a23c7f54cc687d11e235d8 395 Pfam PF00266 Aminotransferase class-V 5 367 1.8E-85 T 12-10-2018 IPR000192 Aminotransferase class V domain Amet_2453 367c29c020a23c7f54cc687d11e235d8 395 Gene3D G3DSA:3.40.640.10 16 257 6.9E-155 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_2453 367c29c020a23c7f54cc687d11e235d8 395 SUPERFAMILY SSF53383 4 375 1.71E-110 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2453 367c29c020a23c7f54cc687d11e235d8 395 PIRSF PIRSF005572 2 382 4.6E-133 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 SMART SM00849 20 214 1.3E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 Hamap MF_01491 Ribonuclease J [rnj]. 3 554 47.485 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 Gene3D G3DSA:3.60.15.10 9 435 1.2E-188 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 354 413 4.1E-11 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 SUPERFAMILY SSF56281 8 423 8.37E-97 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 PIRSF PIRSF004803 2 554 1.8E-244 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 Gene3D G3DSA:3.10.20.580 448 554 3.6E-39 T 12-10-2018 Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 Pfam PF00753 Metallo-beta-lactamase superfamily 20 108 1.3E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 552 1.6E-201 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 363 391 - T 12-10-2018 IPR001587 Ribonuclease J, conserved site Amet_2467 b0faacf3d2749ddc3826eb92b32bf343 554 Gene3D G3DSA:3.40.50.10710 206 364 1.2E-188 T 12-10-2018 Amet_2828 ad1d5bb17b13522db65b07e16432a88b 420 Pfam PF07690 Major Facilitator Superfamily 31 315 1.5E-28 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_2828 ad1d5bb17b13522db65b07e16432a88b 420 SUPERFAMILY SSF103473 15 413 2.88E-54 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_2828 ad1d5bb17b13522db65b07e16432a88b 420 Gene3D G3DSA:1.20.1250.20 6 409 3.3E-46 T 12-10-2018 Amet_2342 0d01c26af2500782f43d531bd47b534b 381 Gene3D G3DSA:3.20.20.105 4 379 1.2E-179 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Amet_2342 0d01c26af2500782f43d531bd47b534b 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 139 372 1.2E-95 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Amet_2342 0d01c26af2500782f43d531bd47b534b 381 SUPERFAMILY SSF51713 9 376 1.7E-168 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Amet_2342 0d01c26af2500782f43d531bd47b534b 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 11 375 59.352 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Amet_2342 0d01c26af2500782f43d531bd47b534b 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 13 378 6.6E-174 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Amet_2342 0d01c26af2500782f43d531bd47b534b 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 13 378 1.8E-182 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Amet_2361 88a0ee2368e77e437f6ba605ec265824 267 Pfam PF00899 ThiF family 25 174 5.2E-35 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Amet_2361 88a0ee2368e77e437f6ba605ec265824 267 SUPERFAMILY SSF69572 22 265 2.75E-57 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Amet_2361 88a0ee2368e77e437f6ba605ec265824 267 Gene3D G3DSA:3.40.50.720 13 267 4.5E-79 T 12-10-2018 Amet_0523 a9acaf611276c377987b609555bd70ce 223 Gene3D G3DSA:1.10.1760.20 21 218 6.3E-35 T 12-10-2018 Amet_0523 a9acaf611276c377987b609555bd70ce 223 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 22 217 2.1E-47 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Amet_4088 c19f7e86786475ef478c7b92ae2fb595 317 Pfam PF14527 WhiA LAGLIDADG-like domain 132 223 4.6E-35 T 12-10-2018 IPR039518 WhiA, LAGLIDADG-like domain Amet_4088 c19f7e86786475ef478c7b92ae2fb595 317 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 107 3.2E-32 T 12-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain Amet_4088 c19f7e86786475ef478c7b92ae2fb595 317 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 310 3.9E-113 T 12-10-2018 IPR033981 Sporulation regulator WhiA-like Amet_4088 c19f7e86786475ef478c7b92ae2fb595 317 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 312 37.201 T 12-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 Amet_4088 c19f7e86786475ef478c7b92ae2fb595 317 Gene3D G3DSA:1.10.10.10 221 313 4.6E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4088 c19f7e86786475ef478c7b92ae2fb595 317 Gene3D G3DSA:3.10.28.10 1 220 7.1E-65 T 12-10-2018 IPR027434 Homing endonuclease Amet_4088 c19f7e86786475ef478c7b92ae2fb595 317 SUPERFAMILY SSF55608 120 227 3.06E-19 T 12-10-2018 IPR027434 Homing endonuclease Amet_4088 c19f7e86786475ef478c7b92ae2fb595 317 Pfam PF02650 WhiA C-terminal HTH domain 226 309 5.1E-37 T 12-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal Amet_0201 500642c735ec7e42f7e1d3ae365a3279 207 Pfam PF02397 Bacterial sugar transferase 7 185 1.1E-59 T 12-10-2018 IPR003362 Bacterial sugar transferase Amet_0739 d4b1ddbe3ba607da5db71dc6d9931096 130 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 9 129 6.1E-36 T 12-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Amet_0739 d4b1ddbe3ba607da5db71dc6d9931096 130 Gene3D G3DSA:1.20.120.330 11 130 2.3E-35 T 12-10-2018 Amet_0739 d4b1ddbe3ba607da5db71dc6d9931096 130 SUPERFAMILY SSF81593 4 127 2.75E-39 T 12-10-2018 Amet_0739 d4b1ddbe3ba607da5db71dc6d9931096 130 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 10 127 1.2E-28 T 12-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Amet_2652 641c04a9ff97beed078859691f2d7207 477 Gene3D G3DSA:1.20.200.10 13 451 3.0E-160 T 12-10-2018 Amet_2652 641c04a9ff97beed078859691f2d7207 477 Gene3D G3DSA:1.10.40.30 368 442 3.0E-160 T 12-10-2018 Amet_2652 641c04a9ff97beed078859691f2d7207 477 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 9.9E-12 T 12-10-2018 IPR000362 Fumarate lyase family Amet_2652 641c04a9ff97beed078859691f2d7207 477 PRINTS PR00149 Fumarate lyase superfamily signature 144 162 9.9E-12 T 12-10-2018 IPR000362 Fumarate lyase family Amet_2652 641c04a9ff97beed078859691f2d7207 477 PRINTS PR00149 Fumarate lyase superfamily signature 238 265 9.9E-12 T 12-10-2018 IPR000362 Fumarate lyase family Amet_2652 641c04a9ff97beed078859691f2d7207 477 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 453 6.5E-123 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_2652 641c04a9ff97beed078859691f2d7207 477 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Amet_2652 641c04a9ff97beed078859691f2d7207 477 Pfam PF00206 Lyase 82 304 2.2E-22 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal Amet_2652 641c04a9ff97beed078859691f2d7207 477 Pfam PF10397 Adenylosuccinate lyase C-terminus 371 452 4.1E-18 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_2652 641c04a9ff97beed078859691f2d7207 477 Gene3D G3DSA:1.10.275.60 24 235 3.0E-160 T 12-10-2018 Amet_2652 641c04a9ff97beed078859691f2d7207 477 SUPERFAMILY SSF48557 8 455 2.98E-100 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amet_2652 641c04a9ff97beed078859691f2d7207 477 SMART SM00998 370 454 1.1E-27 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_3444 4c8a673c3d5f3afbb7e4c48d1e4661d0 336 Gene3D G3DSA:3.40.50.720 1 310 2.6E-114 T 12-10-2018 Amet_3444 4c8a673c3d5f3afbb7e4c48d1e4661d0 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 244 3.5E-11 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Amet_3444 4c8a673c3d5f3afbb7e4c48d1e4661d0 336 SUPERFAMILY SSF51735 2 155 1.67E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3444 4c8a673c3d5f3afbb7e4c48d1e4661d0 336 Gene3D G3DSA:3.30.360.10 128 329 2.6E-114 T 12-10-2018 Amet_3444 4c8a673c3d5f3afbb7e4c48d1e4661d0 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.5E-28 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Amet_3444 4c8a673c3d5f3afbb7e4c48d1e4661d0 336 SUPERFAMILY SSF55347 125 279 2.13E-41 T 12-10-2018 Amet_0168 24bd4d40a46d734e4a388e35a1353b8f 331 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 70 327 1.9E-59 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Amet_0168 24bd4d40a46d734e4a388e35a1353b8f 331 Pfam PF08486 Stage II sporulation protein 66 157 9.3E-21 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Amet_2937 e946957ff65be00739e81b0442986978 346 PIRSF PIRSF038991 3 346 4.4E-75 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Amet_2937 e946957ff65be00739e81b0442986978 346 Pfam PF05145 Transition state regulatory protein AbrB 82 343 3.8E-52 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Amet_2937 e946957ff65be00739e81b0442986978 346 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 4 157 1.0E-32 T 12-10-2018 IPR017516 AbrB duplication Amet_2937 e946957ff65be00739e81b0442986978 346 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 191 343 1.1E-36 T 12-10-2018 IPR017516 AbrB duplication Amet_4224 1fdb98f6cc93809941037cce9c5c9d5b 334 PIRSF PIRSF011570 1 334 4.9E-164 T 12-10-2018 IPR010894 Stage V sporulation AD Amet_4224 1fdb98f6cc93809941037cce9c5c9d5b 334 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 333 2.1E-156 T 12-10-2018 IPR010894 Stage V sporulation AD Amet_4224 1fdb98f6cc93809941037cce9c5c9d5b 334 Gene3D G3DSA:3.40.47.40 1 334 2.6E-151 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily Amet_4224 1fdb98f6cc93809941037cce9c5c9d5b 334 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 333 9.1E-164 T 12-10-2018 IPR010894 Stage V sporulation AD Amet_4224 1fdb98f6cc93809941037cce9c5c9d5b 334 SUPERFAMILY SSF53901 55 310 3.99E-20 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_2695 65bae7938173b7cb54f5b2dabd5fb51f 162 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 2 158 28.716 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Amet_2695 65bae7938173b7cb54f5b2dabd5fb51f 162 Gene3D G3DSA:3.30.1330.200 3 162 1.5E-52 T 12-10-2018 IPR038592 CheD-like superfamily Amet_2695 65bae7938173b7cb54f5b2dabd5fb51f 162 SUPERFAMILY SSF64438 5 160 4.67E-51 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Amet_2695 65bae7938173b7cb54f5b2dabd5fb51f 162 Pfam PF03975 CheD chemotactic sensory transduction 49 154 5.8E-38 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Amet_1755 bd03abd9fd7617a33f3cdcadb1b83936 551 SUPERFAMILY SSF53300 173 342 5.49E-32 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amet_1755 bd03abd9fd7617a33f3cdcadb1b83936 551 Gene3D G3DSA:3.40.50.410 176 342 9.4E-35 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amet_1755 bd03abd9fd7617a33f3cdcadb1b83936 551 Pfam PF00092 von Willebrand factor type A domain 178 338 4.4E-23 T 12-10-2018 IPR002035 von Willebrand factor, type A Amet_1755 bd03abd9fd7617a33f3cdcadb1b83936 551 Pfam PF00754 F5/8 type C domain 401 532 1.0E-6 T 12-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Amet_1755 bd03abd9fd7617a33f3cdcadb1b83936 551 Gene3D G3DSA:2.60.120.260 392 547 1.4E-10 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Amet_1755 bd03abd9fd7617a33f3cdcadb1b83936 551 TIGRFAM TIGR03436 acidobact_VWFA: VWFA-related Acidobacterial domain 121 365 2.6E-24 T 12-10-2018 IPR017802 VWFA-related, acidobacterial-type Amet_1755 bd03abd9fd7617a33f3cdcadb1b83936 551 SUPERFAMILY SSF49785 398 533 1.49E-10 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Amet_1755 bd03abd9fd7617a33f3cdcadb1b83936 551 SMART SM00327 173 345 1.2E-23 T 12-10-2018 IPR002035 von Willebrand factor, type A Amet_1755 bd03abd9fd7617a33f3cdcadb1b83936 551 Pfam PF13240 zinc-ribbon domain 2 25 6.1E-6 T 12-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 Amet_2560 b65611b10a89870475ad0a8dc8baccf4 154 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 54 139 2.0E-46 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 Amet_2560 b65611b10a89870475ad0a8dc8baccf4 154 Pfam PF10934 Protein of unknown function (DUF2634) 31 137 3.7E-37 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 Amet_0706 d05412936e0b3fd7ae93cc6a18cb3297 362 Gene3D G3DSA:1.10.3210.10 3 300 1.7E-69 T 12-10-2018 Amet_0706 d05412936e0b3fd7ae93cc6a18cb3297 362 Pfam PF13487 HD domain 187 249 2.2E-13 T 12-10-2018 Amet_0706 d05412936e0b3fd7ae93cc6a18cb3297 362 SUPERFAMILY SSF109604 131 297 1.68E-34 T 12-10-2018 Amet_0706 d05412936e0b3fd7ae93cc6a18cb3297 362 SMART SM00471 132 268 5.2E-8 T 12-10-2018 IPR003607 HD/PDEase domain Amet_3862 d1fa19b21bd3c576801be3b8e737da03 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3862 d1fa19b21bd3c576801be3b8e737da03 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.9E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3862 d1fa19b21bd3c576801be3b8e737da03 200 Gene3D G3DSA:1.10.357.10 6 197 8.3E-23 T 12-10-2018 Amet_3862 d1fa19b21bd3c576801be3b8e737da03 200 SUPERFAMILY SSF48498 110 194 4.08E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_3862 d1fa19b21bd3c576801be3b8e737da03 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3862 d1fa19b21bd3c576801be3b8e737da03 200 SUPERFAMILY SSF46689 2 75 8.21E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1238 5b7bc15acee0ca0a9fa5df82b50539b5 82 Pfam PF02411 MerT mercuric transport protein 1 45 2.9E-9 T 12-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 Amet_0465 1e0138e179b5ae6ae8a2c934c7119b97 437 TIGRFAM TIGR03173 pbuX: xanthine permease 22 424 1.7E-131 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 Amet_0465 1e0138e179b5ae6ae8a2c934c7119b97 437 Pfam PF00860 Permease family 18 391 3.2E-88 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Amet_0465 1e0138e179b5ae6ae8a2c934c7119b97 437 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 339 359 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Amet_0465 1e0138e179b5ae6ae8a2c934c7119b97 437 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 422 1.1E-107 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Amet_1863 934c59105e16a3ef8c6b004753c9986f 181 SUPERFAMILY SSF55469 6 180 1.31E-53 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_1863 934c59105e16a3ef8c6b004753c9986f 181 Pfam PF00881 Nitroreductase family 7 159 9.5E-32 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amet_1863 934c59105e16a3ef8c6b004753c9986f 181 Gene3D G3DSA:3.40.109.10 3 181 5.3E-59 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_4489 52f007f27011d210759a7d6eb3114925 232 PIRSF PIRSF002155 1 228 5.7E-83 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4489 52f007f27011d210759a7d6eb3114925 232 SUPERFAMILY SSF56808 6 227 1.83E-84 T 12-10-2018 IPR023674 Ribosomal protein L1-like Amet_4489 52f007f27011d210759a7d6eb3114925 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 140 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4489 52f007f27011d210759a7d6eb3114925 232 Gene3D G3DSA:3.40.50.790 68 160 3.8E-85 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Amet_4489 52f007f27011d210759a7d6eb3114925 232 Gene3D G3DSA:3.30.190.20 21 225 3.8E-85 T 12-10-2018 Amet_4489 52f007f27011d210759a7d6eb3114925 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 230 44.276 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Amet_4489 52f007f27011d210759a7d6eb3114925 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.1E-104 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Amet_4489 52f007f27011d210759a7d6eb3114925 232 Pfam PF00687 Ribosomal protein L1p/L10e family 30 221 1.1E-58 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Amet_0087 47e52f4d5c81a213f5c989b8f81f4388 247 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 19 236 1.9E-55 T 12-10-2018 IPR014244 RNA polymerase sigma-I type Amet_0087 47e52f4d5c81a213f5c989b8f81f4388 247 Gene3D G3DSA:1.10.1740.10 17 99 6.1E-11 T 12-10-2018 Amet_0087 47e52f4d5c81a213f5c989b8f81f4388 247 SUPERFAMILY SSF88946 19 101 2.49E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0087 47e52f4d5c81a213f5c989b8f81f4388 247 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 13 238 26.039 T 12-10-2018 IPR014244 RNA polymerase sigma-I type Amet_0087 47e52f4d5c81a213f5c989b8f81f4388 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 219 6.1E-13 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_0087 47e52f4d5c81a213f5c989b8f81f4388 247 Pfam PF04542 Sigma-70 region 2 33 103 2.9E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0087 47e52f4d5c81a213f5c989b8f81f4388 247 PIRSF PIRSF038953 4 247 1.6E-52 T 12-10-2018 IPR014244 RNA polymerase sigma-I type Amet_2131 abb76e0d5798ea1021548b0e01f6e34d 152 Gene3D G3DSA:3.40.630.30 2 144 9.8E-21 T 12-10-2018 Amet_2131 abb76e0d5798ea1021548b0e01f6e34d 152 SUPERFAMILY SSF55729 7 145 6.26E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2131 abb76e0d5798ea1021548b0e01f6e34d 152 Pfam PF00583 Acetyltransferase (GNAT) family 21 129 1.8E-13 T 12-10-2018 IPR000182 GNAT domain Amet_0770 1d2906f2e6ea41bfc9dad3e994f5fa9a 402 Pfam PF13487 HD domain 242 302 8.9E-13 T 12-10-2018 Amet_0770 1d2906f2e6ea41bfc9dad3e994f5fa9a 402 SUPERFAMILY SSF109604 178 320 3.14E-13 T 12-10-2018 Amet_0770 1d2906f2e6ea41bfc9dad3e994f5fa9a 402 Gene3D G3DSA:1.10.3210.10 16 347 3.3E-37 T 12-10-2018 Amet_0803 4d33f06da39c7eb30c3b10de51d16286 152 Gene3D G3DSA:3.40.50.300 1 151 1.1E-42 T 12-10-2018 Amet_0803 4d33f06da39c7eb30c3b10de51d16286 152 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 126 3.8E-39 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Amet_0803 4d33f06da39c7eb30c3b10de51d16286 152 SUPERFAMILY SSF52540 23 150 4.59E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0803 4d33f06da39c7eb30c3b10de51d16286 152 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 6 136 5.0E-40 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Amet_2904 dc6afdd5ce1061a2e07417525dc94772 176 Pfam PF01923 Cobalamin adenosyltransferase 3 164 1.2E-57 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amet_2904 dc6afdd5ce1061a2e07417525dc94772 176 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 146 7.0E-77 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amet_2904 dc6afdd5ce1061a2e07417525dc94772 176 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 167 4.5E-57 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amet_2904 dc6afdd5ce1061a2e07417525dc94772 176 Gene3D G3DSA:1.20.1200.10 13 176 4.0E-55 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amet_2904 dc6afdd5ce1061a2e07417525dc94772 176 SUPERFAMILY SSF89028 1 169 1.1E-55 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Amet_0046 1ebab3c890ff31ba2b7cbd6c2b46ec97 338 Gene3D G3DSA:1.10.8.1150 31 105 1.1E-15 T 12-10-2018 Amet_0046 1ebab3c890ff31ba2b7cbd6c2b46ec97 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 8 333 31.623 T 12-10-2018 IPR003770 Endolytic murein transglycosylase Amet_0046 1ebab3c890ff31ba2b7cbd6c2b46ec97 338 Gene3D G3DSA:3.30.160.60 304 338 3.1E-7 T 12-10-2018 Amet_0046 1ebab3c890ff31ba2b7cbd6c2b46ec97 338 Pfam PF02618 YceG-like family 37 329 2.3E-76 T 12-10-2018 IPR003770 Endolytic murein transglycosylase Amet_0046 1ebab3c890ff31ba2b7cbd6c2b46ec97 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 9 337 5.1E-72 T 12-10-2018 IPR003770 Endolytic murein transglycosylase Amet_0975 36f1f38ae6b870d1559e19defd68e688 137 Gene3D G3DSA:3.10.530.10 51 118 4.7E-21 T 12-10-2018 IPR036593 CPE0013-like superfamily Amet_0975 36f1f38ae6b870d1559e19defd68e688 137 SUPERFAMILY SSF160148 49 122 1.83E-23 T 12-10-2018 IPR036593 CPE0013-like superfamily Amet_0975 36f1f38ae6b870d1559e19defd68e688 137 Pfam PF07892 Protein of unknown function (DUF1667) 38 118 6.6E-31 T 12-10-2018 IPR012460 Protein of unknown function DUF1667 Amet_4437 25c3638f66ae6b7f757eb5dbf9eb672a 186 Gene3D G3DSA:1.20.1260.10 2 146 8.4E-41 T 12-10-2018 IPR012347 Ferritin-like Amet_4437 25c3638f66ae6b7f757eb5dbf9eb672a 186 Pfam PF02915 Rubrerythrin 10 137 1.8E-22 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Amet_4437 25c3638f66ae6b7f757eb5dbf9eb672a 186 Gene3D G3DSA:2.20.28.10 147 185 2.8E-11 T 12-10-2018 Amet_4437 25c3638f66ae6b7f757eb5dbf9eb672a 186 SUPERFAMILY SSF57802 153 183 6.16E-9 T 12-10-2018 Amet_4437 25c3638f66ae6b7f757eb5dbf9eb672a 186 SUPERFAMILY SSF47240 5 147 1.17E-33 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_0193 049379d03a76475b5f27e488e8b299a5 988 Gene3D G3DSA:1.25.40.10 641 822 7.1E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0193 049379d03a76475b5f27e488e8b299a5 988 SMART SM00028 649 682 360.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0193 049379d03a76475b5f27e488e8b299a5 988 SMART SM00028 765 798 2.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0193 049379d03a76475b5f27e488e8b299a5 988 SMART SM00028 724 757 17.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0193 049379d03a76475b5f27e488e8b299a5 988 Pfam PF04932 O-Antigen ligase 281 546 2.3E-18 T 12-10-2018 IPR007016 O-antigen ligase-related Amet_0193 049379d03a76475b5f27e488e8b299a5 988 SUPERFAMILY SSF48452 650 797 1.63E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0193 049379d03a76475b5f27e488e8b299a5 988 Gene3D G3DSA:2.60.120.260 852 988 6.1E-6 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Amet_4721 f4205cc808687b6ab29c7ab632794676 309 Gene3D G3DSA:1.10.3720.10 82 308 1.6E-19 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4721 f4205cc808687b6ab29c7ab632794676 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 3.1E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_4721 f4205cc808687b6ab29c7ab632794676 309 SUPERFAMILY SSF161098 92 307 1.83E-15 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1512 7f775c206eba09a9fef5279c308724bb 523 PIRSF PIRSF002741 4 514 3.5E-79 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_1512 7f775c206eba09a9fef5279c308724bb 523 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 434 8.7E-67 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_1512 7f775c206eba09a9fef5279c308724bb 523 Gene3D G3DSA:3.90.76.10 83 200 6.1E-98 T 12-10-2018 Amet_1512 7f775c206eba09a9fef5279c308724bb 523 Gene3D G3DSA:3.10.105.10 290 488 6.1E-98 T 12-10-2018 Amet_1512 7f775c206eba09a9fef5279c308724bb 523 Gene3D G3DSA:3.40.190.10 73 493 6.1E-98 T 12-10-2018 Amet_1512 7f775c206eba09a9fef5279c308724bb 523 SUPERFAMILY SSF53850 54 508 7.42E-100 T 12-10-2018 Amet_2626 36bda606aef35de3bd1d239b8f70efee 193 SMART SM00563 35 147 1.1E-37 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amet_2626 36bda606aef35de3bd1d239b8f70efee 193 Pfam PF01553 Acyltransferase 22 144 8.5E-26 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amet_2626 36bda606aef35de3bd1d239b8f70efee 193 SUPERFAMILY SSF69593 2 193 1.7E-51 T 12-10-2018 Amet_2626 36bda606aef35de3bd1d239b8f70efee 193 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 20 144 2.2E-30 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 Amet_0597 876caee4a12f333cb7ef5bcbf20343ee 194 SUPERFAMILY SSF46689 3 82 1.28E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0597 876caee4a12f333cb7ef5bcbf20343ee 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.0E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0597 876caee4a12f333cb7ef5bcbf20343ee 194 Gene3D G3DSA:1.10.357.10 1 191 8.3E-32 T 12-10-2018 Amet_0597 876caee4a12f333cb7ef5bcbf20343ee 194 SUPERFAMILY SSF48498 81 190 2.67E-12 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_0597 876caee4a12f333cb7ef5bcbf20343ee 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0597 876caee4a12f333cb7ef5bcbf20343ee 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1192 c55df4390a34a505b928ce1b3b63013d 395 Gene3D G3DSA:3.30.70.360 180 297 6.7E-132 T 12-10-2018 Amet_1192 c55df4390a34a505b928ce1b3b63013d 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 378 2.1E-109 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_1192 c55df4390a34a505b928ce1b3b63013d 395 SUPERFAMILY SSF53187 8 392 1.53E-78 T 12-10-2018 Amet_1192 c55df4390a34a505b928ce1b3b63013d 395 SUPERFAMILY SSF55031 183 292 1.15E-24 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_1192 c55df4390a34a505b928ce1b3b63013d 395 Pfam PF07687 Peptidase dimerisation domain 184 280 7.7E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Amet_1192 c55df4390a34a505b928ce1b3b63013d 395 Gene3D G3DSA:3.40.630.10 14 375 6.7E-132 T 12-10-2018 Amet_1192 c55df4390a34a505b928ce1b3b63013d 395 PIRSF PIRSF005962 1 394 2.5E-124 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_1192 c55df4390a34a505b928ce1b3b63013d 395 Pfam PF01546 Peptidase family M20/M25/M40 71 380 4.9E-34 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 1.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 1.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 392 1.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.1E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 SUPERFAMILY SSF47384 209 281 1.28E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 437 3.2E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 Gene3D G3DSA:1.10.287.130 207 283 2.0E-20 T 12-10-2018 Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 SMART SM00388 214 281 2.3E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 Gene3D G3DSA:3.30.565.10 284 444 7.0E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 281 1.8E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 SMART SM00387 327 439 1.6E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1278 0f850cd8aeec85c82f501529e3da58e1 471 SUPERFAMILY SSF55874 270 441 1.83E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2253 760d999a0dd9cadc1b884f1a6a4b522d 486 Pfam PF05598 Transposase domain (DUF772) 56 126 3.7E-9 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_2536 760d999a0dd9cadc1b884f1a6a4b522d 486 Pfam PF05598 Transposase domain (DUF772) 56 126 3.7E-9 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_0135 1ca7cb547d133a0b93c892b6206f5a84 342 SUPERFAMILY SSF55797 217 339 1.99E-20 T 12-10-2018 IPR035940 CAP superfamily Amet_0135 1ca7cb547d133a0b93c892b6206f5a84 342 Pfam PF00188 Cysteine-rich secretory protein family 224 339 4.3E-14 T 12-10-2018 IPR014044 CAP domain Amet_0135 1ca7cb547d133a0b93c892b6206f5a84 342 Gene3D G3DSA:3.40.33.10 55 341 2.1E-69 T 12-10-2018 IPR035940 CAP superfamily Amet_0135 1ca7cb547d133a0b93c892b6206f5a84 342 Pfam PF14504 CAP-associated N-terminal 72 205 3.5E-35 T 12-10-2018 IPR029410 CAP-associated domain Amet_2665 76efdc7e06bc8d69c67974f47cb26ab3 406 SUPERFAMILY SSF63411 2 205 2.17E-64 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_2665 76efdc7e06bc8d69c67974f47cb26ab3 406 SUPERFAMILY SSF63411 229 402 6.54E-42 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Amet_2665 76efdc7e06bc8d69c67974f47cb26ab3 406 Pfam PF05193 Peptidase M16 inactive domain 165 340 5.7E-43 T 12-10-2018 IPR007863 Peptidase M16, C-terminal Amet_2665 76efdc7e06bc8d69c67974f47cb26ab3 406 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 1.5E-45 T 12-10-2018 IPR011765 Peptidase M16, N-terminal Amet_2665 76efdc7e06bc8d69c67974f47cb26ab3 406 Gene3D G3DSA:3.30.830.10 218 405 5.3E-50 T 12-10-2018 Amet_2665 76efdc7e06bc8d69c67974f47cb26ab3 406 Gene3D G3DSA:3.30.830.10 1 216 2.4E-78 T 12-10-2018 Amet_2665 76efdc7e06bc8d69c67974f47cb26ab3 406 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Amet_4090 7cc89ff4c1cc9ce3d0453ddb91ea4c74 140 PRINTS PR00502 NUDIX hydrolase family signature 27 41 1.1E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amet_4090 7cc89ff4c1cc9ce3d0453ddb91ea4c74 140 PRINTS PR00502 NUDIX hydrolase family signature 41 56 1.1E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Amet_4090 7cc89ff4c1cc9ce3d0453ddb91ea4c74 140 Gene3D G3DSA:3.90.79.10 5 135 1.3E-29 T 12-10-2018 Amet_4090 7cc89ff4c1cc9ce3d0453ddb91ea4c74 140 Pfam PF00293 NUDIX domain 9 125 1.2E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amet_4090 7cc89ff4c1cc9ce3d0453ddb91ea4c74 140 SUPERFAMILY SSF55811 5 131 1.49E-25 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amet_4090 7cc89ff4c1cc9ce3d0453ddb91ea4c74 140 ProSitePatterns PS00893 Nudix box signature. 32 53 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amet_1620 db08bebbb48bf024c5c8c66ef1906769 155 Pfam PF13185 GAF domain 24 152 1.1E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_1620 db08bebbb48bf024c5c8c66ef1906769 155 SUPERFAMILY SSF55781 3 153 2.18E-35 T 12-10-2018 Amet_1620 db08bebbb48bf024c5c8c66ef1906769 155 Gene3D G3DSA:3.30.450.40 22 155 3.9E-47 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_2129 dd37541512a8aa40728f766a7fdc15c1 176 Pfam PF12724 Flavodoxin domain 5 131 2.6E-18 T 12-10-2018 IPR026816 Flavodoxin domain Amet_2129 dd37541512a8aa40728f766a7fdc15c1 176 SUPERFAMILY SSF52218 1 130 2.51E-16 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_2129 dd37541512a8aa40728f766a7fdc15c1 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Amet_2129 dd37541512a8aa40728f766a7fdc15c1 176 Gene3D G3DSA:3.40.50.360 4 127 1.6E-11 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_4427 39ee48b033671a05510ead6c466f5521 179 SUPERFAMILY SSF53323 2 177 1.7E-41 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_4427 39ee48b033671a05510ead6c466f5521 179 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 174 1.8E-34 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amet_4427 39ee48b033671a05510ead6c466f5521 179 Gene3D G3DSA:3.40.920.10 2 179 5.6E-51 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_4074 5135649eaced889416a8192a974d2eff 675 ProSitePatterns PS01233 Urocanase signature. 538 553 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4074 5135649eaced889416a8192a974d2eff 675 Gene3D G3DSA:3.40.1770.10 446 649 1.0E-87 T 12-10-2018 Amet_4074 5135649eaced889416a8192a974d2eff 675 Gene3D G3DSA:3.40.1770.10 85 222 8.2E-45 T 12-10-2018 Amet_4074 5135649eaced889416a8192a974d2eff 675 TIGRFAM TIGR01228 hutU: urocanate hydratase 91 640 3.8E-129 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4074 5135649eaced889416a8192a974d2eff 675 Pfam PF17392 Urocanase C-terminal domain 444 640 7.4E-82 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4074 5135649eaced889416a8192a974d2eff 675 SUPERFAMILY SSF111326 88 646 5.1E-224 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4074 5135649eaced889416a8192a974d2eff 675 PIRSF PIRSF001423 78 661 4.6E-178 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4074 5135649eaced889416a8192a974d2eff 675 Pfam PF17391 Urocanase N-terminal domain 88 214 1.8E-51 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4074 5135649eaced889416a8192a974d2eff 675 Hamap MF_00577 Urocanate hydratase [hutU]. 59 660 42.426 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4074 5135649eaced889416a8192a974d2eff 675 Gene3D G3DSA:3.40.50.10730 223 440 1.6E-78 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_4074 5135649eaced889416a8192a974d2eff 675 Pfam PF01175 Urocanase Rossmann-like domain 217 440 1.7E-82 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_0458 060f9015fe178dc3023e9ffaa6d66423 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 316 3.3E-43 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_1087 a9c3e9eab7529a2709636fdb1b269004 73 Gene3D G3DSA:1.10.10.1100 3 73 2.3E-15 T 12-10-2018 Amet_1087 a9c3e9eab7529a2709636fdb1b269004 73 Pfam PF04324 BFD-like [2Fe-2S] binding domain 18 67 7.8E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Amet_0992 0c355949bbf8cf9b555c2e4f117b4900 225 Pfam PF02613 Nitrate reductase delta subunit 52 179 3.8E-33 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Amet_0992 0c355949bbf8cf9b555c2e4f117b4900 225 Gene3D G3DSA:1.10.3480.10 3 215 6.7E-48 T 12-10-2018 Amet_0992 0c355949bbf8cf9b555c2e4f117b4900 225 SUPERFAMILY SSF89155 9 206 3.79E-41 T 12-10-2018 IPR036411 TorD-like superfamily Amet_1229 768557a904d4274128ddf1c1bc2d2176 105 SMART SM00418 11 89 4.2E-26 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1229 768557a904d4274128ddf1c1bc2d2176 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 45 5.7E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1229 768557a904d4274128ddf1c1bc2d2176 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 5.7E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1229 768557a904d4274128ddf1c1bc2d2176 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 5.7E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1229 768557a904d4274128ddf1c1bc2d2176 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 5.7E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1229 768557a904d4274128ddf1c1bc2d2176 105 Gene3D G3DSA:1.10.10.10 1 98 3.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1229 768557a904d4274128ddf1c1bc2d2176 105 Pfam PF01022 Bacterial regulatory protein, arsR family 18 65 5.5E-18 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_1229 768557a904d4274128ddf1c1bc2d2176 105 SUPERFAMILY SSF46785 9 92 1.28E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4683 64d7d2d435bf77dd284a63039eb56e25 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 176 6.6E-29 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_4683 64d7d2d435bf77dd284a63039eb56e25 188 Pfam PF08281 Sigma-70, region 4 122 174 1.3E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_4683 64d7d2d435bf77dd284a63039eb56e25 188 Gene3D G3DSA:1.10.10.10 99 182 8.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4683 64d7d2d435bf77dd284a63039eb56e25 188 SUPERFAMILY SSF88946 14 103 2.83E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4683 64d7d2d435bf77dd284a63039eb56e25 188 Gene3D G3DSA:1.10.1740.10 10 92 8.6E-15 T 12-10-2018 Amet_4683 64d7d2d435bf77dd284a63039eb56e25 188 SUPERFAMILY SSF88659 113 178 1.27E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_4683 64d7d2d435bf77dd284a63039eb56e25 188 Pfam PF04542 Sigma-70 region 2 24 91 1.8E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_4739 d0d57e83dc62e631a59956d24c06e226 786 SUPERFAMILY SSF101898 23 288 9.94E-19 T 12-10-2018 Amet_4739 d0d57e83dc62e631a59956d24c06e226 786 Gene3D G3DSA:2.120.10.30 13 188 4.8E-15 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amet_4739 d0d57e83dc62e631a59956d24c06e226 786 Pfam PF13416 Bacterial extracellular solute-binding protein 376 675 9.2E-20 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amet_4739 d0d57e83dc62e631a59956d24c06e226 786 SUPERFAMILY SSF53850 358 785 8.69E-40 T 12-10-2018 Amet_3423 55462f238030a5d187510df3798092bd 442 Pfam PF14398 YheC/D like ATP-grasp 184 434 9.1E-48 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D Amet_3423 55462f238030a5d187510df3798092bd 442 SUPERFAMILY SSF56059 206 410 6.0E-5 T 12-10-2018 Amet_1688 cfc737f96ffadb3eba706862b75c778e 255 Pfam PF00005 ABC transporter 24 172 1.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1688 cfc737f96ffadb3eba706862b75c778e 255 Gene3D G3DSA:3.40.50.300 2 244 3.3E-65 T 12-10-2018 Amet_1688 cfc737f96ffadb3eba706862b75c778e 255 SUPERFAMILY SSF52540 4 227 9.28E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1688 cfc737f96ffadb3eba706862b75c778e 255 SMART SM00382 33 220 5.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 SMART SM00028 917 950 130.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 SMART SM00028 877 910 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 SMART SM00028 792 825 19.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 SMART SM00028 837 870 3.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 Pfam PF13374 Tetratricopeptide repeat 837 869 0.002 T 12-10-2018 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 SUPERFAMILY SSF48452 125 231 2.85E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 Gene3D G3DSA:1.25.40.10 880 962 9.0E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 SUPERFAMILY SSF52540 245 502 3.89E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 Gene3D G3DSA:1.25.40.10 110 248 3.7E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 SUPERFAMILY SSF48452 776 953 9.68E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 Pfam PF03704 Bacterial transcriptional activator domain 128 227 1.3E-9 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 SMART SM01043 97 229 5.2E-17 T 12-10-2018 IPR005158 Bacterial transcriptional activator domain Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 Gene3D G3DSA:1.25.40.10 668 879 6.4E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 Pfam PF13191 AAA ATPase domain 248 415 3.7E-18 T 12-10-2018 Amet_4072 0a5b517bf1a7f49515bf813f00473274 977 Gene3D G3DSA:1.10.10.10 2 89 5.9E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2726 9989d42351f9d2e04cf30e05f1ca48c2 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 86 99 6.8E-11 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amet_2726 9989d42351f9d2e04cf30e05f1ca48c2 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 65 81 6.8E-11 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amet_2726 9989d42351f9d2e04cf30e05f1ca48c2 101 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 31 47 6.8E-11 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amet_2726 9989d42351f9d2e04cf30e05f1ca48c2 101 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 101 17.706 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amet_2726 9989d42351f9d2e04cf30e05f1ca48c2 101 Pfam PF02049 Flagellar hook-basal body complex protein FliE 22 101 2.8E-27 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amet_2726 9989d42351f9d2e04cf30e05f1ca48c2 101 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 7 101 4.2E-19 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Amet_0618 07f55e522152ff120f21d476cd607592 242 SUPERFAMILY SSF52172 3 130 1.1E-24 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0618 07f55e522152ff120f21d476cd607592 242 SMART SM00850 142 235 7.0E-21 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_0618 07f55e522152ff120f21d476cd607592 242 SMART SM00448 3 116 1.4E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0618 07f55e522152ff120f21d476cd607592 242 Pfam PF00072 Response regulator receiver domain 5 115 1.3E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0618 07f55e522152ff120f21d476cd607592 242 Pfam PF04397 LytTr DNA-binding domain 144 234 4.5E-17 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Amet_0618 07f55e522152ff120f21d476cd607592 242 Gene3D G3DSA:3.40.50.2300 1 133 3.0E-30 T 12-10-2018 Amet_0618 07f55e522152ff120f21d476cd607592 242 Gene3D G3DSA:2.40.50.1020 134 228 1.7E-15 T 12-10-2018 Amet_2235 4e3501d5b428b2d1d0d735d9f18a7449 251 Gene3D G3DSA:1.10.10.200 29 92 3.0E-26 T 12-10-2018 IPR017856 Integrase-like, N-terminal Amet_2235 4e3501d5b428b2d1d0d735d9f18a7449 251 Gene3D G3DSA:3.30.70.980 145 215 9.7E-54 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amet_2235 4e3501d5b428b2d1d0d735d9f18a7449 251 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 14 251 33.806 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amet_2235 4e3501d5b428b2d1d0d735d9f18a7449 251 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 19 249 6.0E-89 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amet_2235 4e3501d5b428b2d1d0d735d9f18a7449 251 Gene3D G3DSA:3.30.70.980 96 248 9.7E-54 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amet_2235 4e3501d5b428b2d1d0d735d9f18a7449 251 SUPERFAMILY SSF75625 19 250 1.44E-86 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amet_2235 4e3501d5b428b2d1d0d735d9f18a7449 251 Pfam PF01709 Transcriptional regulator 20 249 8.2E-92 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 364 372 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 Gene3D G3DSA:1.20.1370.20 445 537 1.8E-30 T 12-10-2018 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 SUPERFAMILY SSF56634 13 535 4.32E-222 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 Pfam PF00199 Catalase 34 419 1.6E-181 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 Pfam PF06628 Catalase-related immune-responsive 449 512 1.6E-20 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 Gene3D G3DSA:3.40.50.880 538 711 1.6E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 PRINTS PR00067 Catalase signature 150 168 2.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 PRINTS PR00067 Catalase signature 47 70 2.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 PRINTS PR00067 Catalase signature 110 128 2.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 PRINTS PR00067 Catalase signature 319 346 2.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 PRINTS PR00067 Catalase signature 131 148 2.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 PRINTS PR00067 Catalase signature 351 377 2.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 PIRSF PIRSF038927 3 711 0.0 T 12-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 Pfam PF01965 DJ-1/PfpI family 545 670 3.0E-14 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 SUPERFAMILY SSF52317 544 700 4.04E-21 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 SMART SM01060 34 422 3.9E-271 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 Gene3D G3DSA:2.40.180.10 1 444 3.4E-210 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Amet_0511 ead4da43a8866895b0cedb0d83f7cfe6 713 ProSitePatterns PS00438 Catalase proximal active site signature. 70 86 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Amet_1356 460b2e1036e8c320518353f9d7030a30 447 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 2 446 49.124 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Amet_1356 460b2e1036e8c320518353f9d7030a30 447 Pfam PF02347 Glycine cleavage system P-protein 4 443 5.6E-142 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Amet_1356 460b2e1036e8c320518353f9d7030a30 447 Gene3D G3DSA:3.40.640.10 83 348 1.8E-166 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_1356 460b2e1036e8c320518353f9d7030a30 447 SUPERFAMILY SSF53383 3 444 7.9E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_1356 460b2e1036e8c320518353f9d7030a30 447 PIRSF PIRSF006815 2 447 2.3E-196 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Amet_1356 460b2e1036e8c320518353f9d7030a30 447 Gene3D G3DSA:3.90.1150.10 72 443 1.8E-166 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_4445 0db31a6d881107087a32d3b05ed883b9 265 Pfam PF02361 Cobalt transport protein 15 235 5.4E-51 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Amet_4445 0db31a6d881107087a32d3b05ed883b9 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 264 34.529 T 12-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 Amet_1528 f62fcdef65c1604d80724b4d05582477 401 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 83 2.6E-12 T 12-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger Amet_1528 f62fcdef65c1604d80724b4d05582477 401 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 141 7.9E-11 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain Amet_1528 f62fcdef65c1604d80724b4d05582477 401 Pfam PF01610 Transposase 156 394 2.2E-76 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Amet_3758 7e5ed00de33c28304d3e9e4e3eef3e8c 218 Gene3D G3DSA:3.40.225.10 1 215 3.6E-78 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amet_3758 7e5ed00de33c28304d3e9e4e3eef3e8c 218 SUPERFAMILY SSF53639 4 213 9.03E-68 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Amet_3758 7e5ed00de33c28304d3e9e4e3eef3e8c 218 SMART SM01007 8 185 3.3E-66 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amet_3758 7e5ed00de33c28304d3e9e4e3eef3e8c 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 184 1.8E-50 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal Amet_0362 82e8168c5502fdbae3053ccc9686f8bb 386 SUPERFAMILY SSF111369 117 305 1.18E-21 T 12-10-2018 Amet_0362 82e8168c5502fdbae3053ccc9686f8bb 386 SUPERFAMILY SSF111369 47 113 7.98E-8 T 12-10-2018 Amet_0362 82e8168c5502fdbae3053ccc9686f8bb 386 Gene3D G3DSA:1.10.287.470 91 197 2.1E-66 T 12-10-2018 Amet_0362 82e8168c5502fdbae3053ccc9686f8bb 386 Gene3D G3DSA:2.40.420.20 45 367 2.1E-66 T 12-10-2018 Amet_0362 82e8168c5502fdbae3053ccc9686f8bb 386 Gene3D G3DSA:2.40.50.100 57 231 2.1E-66 T 12-10-2018 Amet_0362 82e8168c5502fdbae3053ccc9686f8bb 386 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 381 1.1E-62 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Amet_0362 82e8168c5502fdbae3053ccc9686f8bb 386 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 299 1.1E-24 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Amet_0362 82e8168c5502fdbae3053ccc9686f8bb 386 Gene3D G3DSA:2.40.30.170 46 307 2.1E-66 T 12-10-2018 Amet_0941 7becda438aabdf85c489cbf4a74f9688 724 Gene3D G3DSA:1.10.486.10 382 545 4.6E-122 T 12-10-2018 Amet_0941 7becda438aabdf85c489cbf4a74f9688 724 SUPERFAMILY SSF52540 3 637 3.7E-183 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0941 7becda438aabdf85c489cbf4a74f9688 724 Gene3D G3DSA:3.40.50.300 279 629 4.6E-122 T 12-10-2018 Amet_0941 7becda438aabdf85c489cbf4a74f9688 724 Pfam PF12073 Protein of unknown function (DUF3553) 681 722 1.6E-5 T 12-10-2018 IPR021938 Protein of unknown function DUF3553 Amet_0941 7becda438aabdf85c489cbf4a74f9688 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 271 1.1E-84 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Amet_0941 7becda438aabdf85c489cbf4a74f9688 724 Gene3D G3DSA:1.10.10.160 110 186 1.7E-106 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Amet_0941 7becda438aabdf85c489cbf4a74f9688 724 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 3 720 1.6E-293 T 12-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 Amet_0941 7becda438aabdf85c489cbf4a74f9688 724 Pfam PF13361 UvrD-like helicase C-terminal domain 276 610 1.9E-71 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amet_0941 7becda438aabdf85c489cbf4a74f9688 724 Gene3D G3DSA:3.40.50.300 6 272 1.7E-106 T 12-10-2018 Amet_2349 b62152d86a5768170d8b262e2d66784c 297 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 108 270 1.6E-54 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amet_2349 b62152d86a5768170d8b262e2d66784c 297 PRINTS PR01755 Bacterial translocase SecF protein signature 28 43 4.9E-30 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amet_2349 b62152d86a5768170d8b262e2d66784c 297 PRINTS PR01755 Bacterial translocase SecF protein signature 221 236 4.9E-30 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amet_2349 b62152d86a5768170d8b262e2d66784c 297 PRINTS PR01755 Bacterial translocase SecF protein signature 141 155 4.9E-30 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amet_2349 b62152d86a5768170d8b262e2d66784c 297 PRINTS PR01755 Bacterial translocase SecF protein signature 189 207 4.9E-30 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amet_2349 b62152d86a5768170d8b262e2d66784c 297 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 3 284 26.711 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Amet_2349 b62152d86a5768170d8b262e2d66784c 297 Pfam PF02355 Protein export membrane protein 112 282 1.7E-66 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Amet_2349 b62152d86a5768170d8b262e2d66784c 297 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 29 273 1.3E-76 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Amet_2349 b62152d86a5768170d8b262e2d66784c 297 Gene3D G3DSA:1.20.1640.10 102 293 1.4E-8 T 12-10-2018 Amet_2349 b62152d86a5768170d8b262e2d66784c 297 Pfam PF07549 SecD/SecF GG Motif 27 45 9.6E-5 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Amet_2349 b62152d86a5768170d8b262e2d66784c 297 SUPERFAMILY SSF82866 71 285 7.46E-39 T 12-10-2018 Amet_1695 bed93fde2ec97c39b6fee73d241f13b2 386 SUPERFAMILY SSF56300 163 383 6.24E-33 T 12-10-2018 Amet_1695 bed93fde2ec97c39b6fee73d241f13b2 386 Pfam PF00149 Calcineurin-like phosphoesterase 162 329 1.3E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amet_1695 bed93fde2ec97c39b6fee73d241f13b2 386 Gene3D G3DSA:3.60.21.10 159 353 3.7E-22 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_1760 f95fa506492eb55628d8b77cc0c7b868 239 SUPERFAMILY SSF53335 27 223 6.14E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_1760 f95fa506492eb55628d8b77cc0c7b868 239 Gene3D G3DSA:3.40.50.150 23 228 1.1E-37 T 12-10-2018 Amet_1760 f95fa506492eb55628d8b77cc0c7b868 239 Pfam PF13649 Methyltransferase domain 69 162 8.5E-19 T 12-10-2018 Amet_0653 3e4e69315ec365875ac419cd70f845b8 414 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 401 53.64 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_0653 3e4e69315ec365875ac419cd70f845b8 414 SUPERFAMILY SSF69864 175 400 4.97E-91 T 12-10-2018 Amet_0653 3e4e69315ec365875ac419cd70f845b8 414 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 3.4E-156 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_0653 3e4e69315ec365875ac419cd70f845b8 414 Gene3D G3DSA:3.40.50.620 7 176 4.2E-71 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_0653 3e4e69315ec365875ac419cd70f845b8 414 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_0653 3e4e69315ec365875ac419cd70f845b8 414 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 120 131 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_0653 3e4e69315ec365875ac419cd70f845b8 414 SUPERFAMILY SSF52402 6 207 2.1E-49 T 12-10-2018 Amet_0653 3e4e69315ec365875ac419cd70f845b8 414 Pfam PF00764 Arginosuccinate synthase 10 394 2.1E-163 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_0653 3e4e69315ec365875ac419cd70f845b8 414 Gene3D G3DSA:3.90.1260.10 178 405 6.2E-95 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_1231 dcc26e79e51576db7ab5aaad54973516 78 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 77 2.7E-24 T 12-10-2018 IPR005243 Redox-active disulphide protein 2 Amet_1231 dcc26e79e51576db7ab5aaad54973516 78 PIRSF PIRSF037031 1 78 3.9E-31 T 12-10-2018 IPR005243 Redox-active disulphide protein 2 Amet_1231 dcc26e79e51576db7ab5aaad54973516 78 Pfam PF13192 Thioredoxin domain 2 77 1.7E-28 T 12-10-2018 IPR012336 Thioredoxin-like fold Amet_1231 dcc26e79e51576db7ab5aaad54973516 78 Gene3D G3DSA:3.40.30.10 1 76 1.9E-30 T 12-10-2018 Amet_1231 dcc26e79e51576db7ab5aaad54973516 78 SUPERFAMILY SSF52833 1 76 6.22E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_1332 d8b68eaaa43db08df235f060a7629a85 358 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_1332 d8b68eaaa43db08df235f060a7629a85 358 Gene3D G3DSA:3.30.70.20 23 94 4.0E-13 T 12-10-2018 Amet_1332 d8b68eaaa43db08df235f060a7629a85 358 SUPERFAMILY SSF54862 32 77 1.1E-13 T 12-10-2018 Amet_1332 d8b68eaaa43db08df235f060a7629a85 358 Pfam PF12837 4Fe-4S binding domain 51 74 1.3E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_1332 d8b68eaaa43db08df235f060a7629a85 358 Pfam PF12838 4Fe-4S dicluster domain 257 304 3.3E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_1332 d8b68eaaa43db08df235f060a7629a85 358 Gene3D G3DSA:3.30.70.20 253 309 1.9E-8 T 12-10-2018 Amet_1332 d8b68eaaa43db08df235f060a7629a85 358 SUPERFAMILY SSF54862 255 308 3.76E-9 T 12-10-2018 Amet_1332 d8b68eaaa43db08df235f060a7629a85 358 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3323 f5bca6828ed06114b07d15f572c84d90 369 Pfam PF00005 ABC transporter 21 162 1.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3323 f5bca6828ed06114b07d15f572c84d90 369 SUPERFAMILY SSF52540 4 244 5.18E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3323 f5bca6828ed06114b07d15f572c84d90 369 Gene3D G3DSA:2.40.50.100 240 366 2.2E-30 T 12-10-2018 Amet_3323 f5bca6828ed06114b07d15f572c84d90 369 Gene3D G3DSA:2.40.50.140 307 352 2.2E-30 T 12-10-2018 Amet_3323 f5bca6828ed06114b07d15f572c84d90 369 SUPERFAMILY SSF50331 237 367 8.99E-25 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Amet_3323 f5bca6828ed06114b07d15f572c84d90 369 Pfam PF08402 TOBE domain 285 360 4.6E-6 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Amet_3323 f5bca6828ed06114b07d15f572c84d90 369 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3323 f5bca6828ed06114b07d15f572c84d90 369 SMART SM00382 29 213 2.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3323 f5bca6828ed06114b07d15f572c84d90 369 Gene3D G3DSA:3.40.50.300 1 239 5.3E-71 T 12-10-2018 Amet_3824 e6867fbaa1602d5a80c1ebcf620dc5dc 508 Gene3D G3DSA:3.40.605.10 16 443 2.3E-168 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amet_3824 e6867fbaa1602d5a80c1ebcf620dc5dc 508 Gene3D G3DSA:3.40.309.10 223 405 2.3E-168 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amet_3824 e6867fbaa1602d5a80c1ebcf620dc5dc 508 SUPERFAMILY SSF53720 11 448 3.53E-76 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amet_3824 e6867fbaa1602d5a80c1ebcf620dc5dc 508 Pfam PF00171 Aldehyde dehydrogenase family 24 274 2.5E-22 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amet_3824 e6867fbaa1602d5a80c1ebcf620dc5dc 508 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 505 1.5E-227 T 12-10-2018 IPR013357 Acetaldehyde dehydrogenase, acetylating Amet_1382 b5a3bea168465bd56593abb3326a38e7 448 SUPERFAMILY SSF55031 185 363 2.42E-35 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_1382 b5a3bea168465bd56593abb3326a38e7 448 Pfam PF01546 Peptidase family M20/M25/M40 82 444 1.0E-34 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_1382 b5a3bea168465bd56593abb3326a38e7 448 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 79 88 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Amet_1382 b5a3bea168465bd56593abb3326a38e7 448 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 115 153 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Amet_1382 b5a3bea168465bd56593abb3326a38e7 448 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 14 443 7.8E-131 T 12-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 Amet_1382 b5a3bea168465bd56593abb3326a38e7 448 Gene3D G3DSA:3.40.630.10 14 446 1.8E-140 T 12-10-2018 Amet_1382 b5a3bea168465bd56593abb3326a38e7 448 Gene3D G3DSA:3.30.70.360 203 277 1.8E-140 T 12-10-2018 Amet_1382 b5a3bea168465bd56593abb3326a38e7 448 SUPERFAMILY SSF53187 3 447 7.71E-61 T 12-10-2018 Amet_1382 b5a3bea168465bd56593abb3326a38e7 448 Gene3D G3DSA:3.30.70.360 185 362 1.8E-140 T 12-10-2018 Amet_0445 959a0093056767f3b92f76b3d4763243 460 Gene3D G3DSA:1.10.45.10 419 459 1.3E-9 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Amet_0445 959a0093056767f3b92f76b3d4763243 460 SUPERFAMILY SSF56176 5 217 3.32E-61 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_0445 959a0093056767f3b92f76b3d4763243 460 SUPERFAMILY SSF55103 223 459 8.5E-53 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Amet_0445 959a0093056767f3b92f76b3d4763243 460 Gene3D G3DSA:3.30.465.10 98 219 1.2E-40 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_0445 959a0093056767f3b92f76b3d4763243 460 Pfam PF01565 FAD binding domain 46 182 2.7E-35 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amet_0445 959a0093056767f3b92f76b3d4763243 460 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 457 2.7E-50 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Amet_0445 959a0093056767f3b92f76b3d4763243 460 Gene3D G3DSA:3.30.43.10 1 96 9.9E-25 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Amet_0445 959a0093056767f3b92f76b3d4763243 460 Gene3D G3DSA:3.30.70.2740 341 418 1.2E-10 T 12-10-2018 Amet_2746 1bba7655df7fb02088ab90017152bb5f 81 Gene3D G3DSA:3.30.1320.10 1 81 3.2E-37 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2746 1bba7655df7fb02088ab90017152bb5f 81 Pfam PF00886 Ribosomal protein S16 9 67 1.6E-27 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2746 1bba7655df7fb02088ab90017152bb5f 81 SUPERFAMILY SSF54565 2 80 2.09E-34 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2746 1bba7655df7fb02088ab90017152bb5f 81 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 2.5E-36 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2746 1bba7655df7fb02088ab90017152bb5f 81 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 26.132 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2746 1bba7655df7fb02088ab90017152bb5f 81 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2768 13946dcd354f5d7392ad161af771f454 187 Pfam PF03602 Conserved hypothetical protein 95 1 180 2.2E-55 T 12-10-2018 Amet_2768 13946dcd354f5d7392ad161af771f454 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 1.7E-51 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Amet_2768 13946dcd354f5d7392ad161af771f454 187 PIRSF PIRSF004553 1 184 1.6E-52 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Amet_2768 13946dcd354f5d7392ad161af771f454 187 Gene3D G3DSA:3.40.50.150 1 183 3.3E-58 T 12-10-2018 Amet_2768 13946dcd354f5d7392ad161af771f454 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amet_2768 13946dcd354f5d7392ad161af771f454 187 SUPERFAMILY SSF53335 1 180 1.59E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0467 a2efcde6e04b1b90f6c5db330aaf259e 435 SMART SM00304 77 129 4.8E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0467 a2efcde6e04b1b90f6c5db330aaf259e 435 Gene3D G3DSA:1.10.287.950 78 398 7.5E-68 T 12-10-2018 Amet_0467 a2efcde6e04b1b90f6c5db330aaf259e 435 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 205 386 5.4E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0467 a2efcde6e04b1b90f6c5db330aaf259e 435 SMART SM00283 158 433 7.2E-64 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0467 a2efcde6e04b1b90f6c5db330aaf259e 435 SUPERFAMILY SSF58104 97 433 3.27E-71 T 12-10-2018 Amet_3533 8c1e9f28cc2b68c4ecdcca4dcaa13b88 339 Gene3D G3DSA:3.40.190.170 40 339 2.4E-109 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Amet_3533 8c1e9f28cc2b68c4ecdcca4dcaa13b88 339 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 44 296 1.2E-77 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Amet_3533 8c1e9f28cc2b68c4ecdcca4dcaa13b88 339 PIRSF PIRSF006470 10 339 2.0E-124 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Amet_3533 8c1e9f28cc2b68c4ecdcca4dcaa13b88 339 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 44 323 1.4E-92 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Amet_3389 12a6e32a955d68bfe628e36a8457779b 94 SUPERFAMILY SSF141000 2 92 3.27E-19 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Amet_3389 12a6e32a955d68bfe628e36a8457779b 94 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 94 16.953 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Amet_3389 12a6e32a955d68bfe628e36a8457779b 94 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 88 1.5E-12 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Amet_3389 12a6e32a955d68bfe628e36a8457779b 94 Gene3D G3DSA:1.10.20.60 1 92 2.1E-18 T 12-10-2018 Amet_3389 12a6e32a955d68bfe628e36a8457779b 94 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 2.1E-20 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Amet_1622 8139021a2b094eef8d84b9388ae0c174 387 Gene3D G3DSA:3.30.70.360 182 296 2.1E-135 T 12-10-2018 Amet_1622 8139021a2b094eef8d84b9388ae0c174 387 Pfam PF01546 Peptidase family M20/M25/M40 72 381 3.1E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_1622 8139021a2b094eef8d84b9388ae0c174 387 Gene3D G3DSA:3.40.630.10 16 369 2.1E-135 T 12-10-2018 Amet_1622 8139021a2b094eef8d84b9388ae0c174 387 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 370 1.0E-103 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_1622 8139021a2b094eef8d84b9388ae0c174 387 PIRSF PIRSF005962 1 386 1.3E-126 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 Amet_1622 8139021a2b094eef8d84b9388ae0c174 387 SUPERFAMILY SSF55031 186 297 7.98E-29 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_1622 8139021a2b094eef8d84b9388ae0c174 387 Pfam PF07687 Peptidase dimerisation domain 187 276 1.1E-10 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Amet_1622 8139021a2b094eef8d84b9388ae0c174 387 SUPERFAMILY SSF53187 3 380 4.09E-77 T 12-10-2018 Amet_2736 4bd0a38f8750f9ffe0f19f9d360af1b8 365 Gene3D G3DSA:1.10.10.10 293 364 6.3E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2736 4bd0a38f8750f9ffe0f19f9d360af1b8 365 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 73 289 2.7E-77 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Amet_2736 4bd0a38f8750f9ffe0f19f9d360af1b8 365 SUPERFAMILY SSF46785 302 356 1.24E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2736 4bd0a38f8750f9ffe0f19f9d360af1b8 365 SUPERFAMILY SSF102405 85 290 4.43E-38 T 12-10-2018 Amet_2736 4bd0a38f8750f9ffe0f19f9d360af1b8 365 Pfam PF02481 DNA recombination-mediator protein A 74 279 1.8E-80 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Amet_2736 4bd0a38f8750f9ffe0f19f9d360af1b8 365 Gene3D G3DSA:3.40.50.450 1 292 1.2E-95 T 12-10-2018 Amet_1137 b6e1609fe4e6669f289f54140124f0ff 535 SUPERFAMILY SSF158472 270 318 9.68E-12 T 12-10-2018 Amet_1137 b6e1609fe4e6669f289f54140124f0ff 535 Pfam PF00672 HAMP domain 270 318 2.4E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1137 b6e1609fe4e6669f289f54140124f0ff 535 Gene3D G3DSA:3.30.565.10 380 528 1.1E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1137 b6e1609fe4e6669f289f54140124f0ff 535 SMART SM00304 269 321 3.3E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_1137 b6e1609fe4e6669f289f54140124f0ff 535 Gene3D G3DSA:1.20.1480.50 235 327 1.1E-14 T 12-10-2018 Amet_1137 b6e1609fe4e6669f289f54140124f0ff 535 Pfam PF06580 Histidine kinase 326 405 1.5E-24 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Amet_1137 b6e1609fe4e6669f289f54140124f0ff 535 SUPERFAMILY SSF55874 381 526 2.19E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1281 b8f295a012e6ae770786abdbd5ff174c 221 Pfam PF04647 Accessory gene regulator B 9 195 3.5E-36 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_1281 b8f295a012e6ae770786abdbd5ff174c 221 SMART SM00793 6 204 5.2E-12 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_0453 1cb0566113314d8e24b8f5c276d51c69 159 Pfam PF04892 VanZ like family 12 145 1.2E-26 T 12-10-2018 IPR006976 VanZ-like Amet_0453 1cb0566113314d8e24b8f5c276d51c69 159 PIRSF PIRSF019083 2 158 4.7E-46 T 12-10-2018 IPR016747 Phosphotransbutyrylase Amet_0189 0061492eac0acaf3cb29404cc7af2e24 195 SUPERFAMILY SSF48498 79 194 2.0E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_0189 0061492eac0acaf3cb29404cc7af2e24 195 Gene3D G3DSA:1.10.357.10 55 195 6.8E-14 T 12-10-2018 Amet_0189 0061492eac0acaf3cb29404cc7af2e24 195 Gene3D G3DSA:1.10.10.60 7 54 5.3E-17 T 12-10-2018 Amet_0189 0061492eac0acaf3cb29404cc7af2e24 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.9E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0189 0061492eac0acaf3cb29404cc7af2e24 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.9E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0189 0061492eac0acaf3cb29404cc7af2e24 195 SUPERFAMILY SSF46689 6 84 2.44E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0189 0061492eac0acaf3cb29404cc7af2e24 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 1.8E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_2371 548e7c510d0d5257d8fa82e5d74e1f2a 736 SUPERFAMILY SSF51703 3 447 1.49E-168 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_2371 548e7c510d0d5257d8fa82e5d74e1f2a 736 Gene3D G3DSA:3.20.20.440 15 427 3.1E-206 T 12-10-2018 IPR037086 D-Lysine 5,6-aminomutase alpha subunit superfamily Amet_2371 548e7c510d0d5257d8fa82e5d74e1f2a 736 Pfam PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase 504 579 9.7E-29 T 12-10-2018 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 Amet_2371 548e7c510d0d5257d8fa82e5d74e1f2a 736 Pfam PF02310 B12 binding domain 599 717 7.6E-15 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_2371 548e7c510d0d5257d8fa82e5d74e1f2a 736 SUPERFAMILY SSF52242 596 730 9.94E-31 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_2371 548e7c510d0d5257d8fa82e5d74e1f2a 736 Pfam PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit 65 442 9.2E-45 T 12-10-2018 IPR015130 D-Lysine 5,6-aminomutase alpha subunit Amet_2371 548e7c510d0d5257d8fa82e5d74e1f2a 736 Gene3D G3DSA:3.30.30.60 502 574 3.5E-30 T 12-10-2018 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily GO:0046983 Amet_2371 548e7c510d0d5257d8fa82e5d74e1f2a 736 Gene3D G3DSA:3.40.50.280 584 733 7.3E-39 T 12-10-2018 Amet_2086 a59f37ba5b2a4c27372e4ffb0d0b5b2a 216 Pfam PF02607 B12 binding domain 10 83 6.7E-13 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2086 a59f37ba5b2a4c27372e4ffb0d0b5b2a 216 SUPERFAMILY SSF47644 6 88 8.76E-18 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2086 a59f37ba5b2a4c27372e4ffb0d0b5b2a 216 SUPERFAMILY SSF52242 78 215 2.75E-40 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_2086 a59f37ba5b2a4c27372e4ffb0d0b5b2a 216 Gene3D G3DSA:3.40.50.280 88 216 1.3E-42 T 12-10-2018 Amet_2086 a59f37ba5b2a4c27372e4ffb0d0b5b2a 216 Pfam PF02310 B12 binding domain 96 198 5.8E-22 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_2086 a59f37ba5b2a4c27372e4ffb0d0b5b2a 216 SMART SM01018 5 90 1.8E-20 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2086 a59f37ba5b2a4c27372e4ffb0d0b5b2a 216 Gene3D G3DSA:1.10.1240.10 5 85 1.5E-25 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_0924 51f9f849aed3621a12f6e0a10daaee89 218 SUPERFAMILY SSF53328 5 216 1.96E-58 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amet_0924 51f9f849aed3621a12f6e0a10daaee89 218 Pfam PF00551 Formyl transferase 5 189 6.5E-54 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Amet_0924 51f9f849aed3621a12f6e0a10daaee89 218 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 5 198 6.6E-62 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Amet_0924 51f9f849aed3621a12f6e0a10daaee89 218 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 195 31.002 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Amet_0924 51f9f849aed3621a12f6e0a10daaee89 218 Gene3D G3DSA:3.40.50.170 1 213 6.3E-72 T 12-10-2018 Amet_0476 c25dfe239a9e6bcf5d0368340f0b7f07 309 Gene3D G3DSA:3.50.30.60 167 301 2.4E-43 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Amet_0476 c25dfe239a9e6bcf5d0368340f0b7f07 309 PIRSF PIRSF028757 1 308 1.8E-90 T 12-10-2018 IPR003507 Peptidase family S66 Amet_0476 c25dfe239a9e6bcf5d0368340f0b7f07 309 SUPERFAMILY SSF52317 1 163 1.92E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0476 c25dfe239a9e6bcf5d0368340f0b7f07 309 SUPERFAMILY SSF141986 141 299 9.15E-44 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Amet_0476 c25dfe239a9e6bcf5d0368340f0b7f07 309 Pfam PF02016 LD-carboxypeptidase 13 294 8.6E-84 T 12-10-2018 IPR003507 Peptidase family S66 Amet_0476 c25dfe239a9e6bcf5d0368340f0b7f07 309 Gene3D G3DSA:3.40.50.10740 1 157 2.6E-57 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal Amet_2954 61836522c648de105dd736d800b93a88 339 SUPERFAMILY SSF56059 106 324 3.71E-44 T 12-10-2018 Amet_2954 61836522c648de105dd736d800b93a88 339 Gene3D G3DSA:3.30.1490.20 121 188 8.1E-55 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_2954 61836522c648de105dd736d800b93a88 339 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 264 291 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_2954 61836522c648de105dd736d800b93a88 339 SUPERFAMILY SSF52440 28 106 5.56E-12 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_2954 61836522c648de105dd736d800b93a88 339 Pfam PF07478 D-ala D-ala ligase C-terminus 114 319 9.2E-40 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_2954 61836522c648de105dd736d800b93a88 339 Gene3D G3DSA:3.40.50.20 29 109 1.4E-7 T 12-10-2018 Amet_2954 61836522c648de105dd736d800b93a88 339 Gene3D G3DSA:3.30.470.20 110 314 8.1E-55 T 12-10-2018 Amet_4232 d7b93feb991f06ccf20515647291f7f1 196 SUPERFAMILY SSF51391 2 195 3.53E-51 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_4232 d7b93feb991f06ccf20515647291f7f1 196 Pfam PF02581 Thiamine monophosphate synthase 2 178 5.0E-48 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_4232 d7b93feb991f06ccf20515647291f7f1 196 Gene3D G3DSA:3.20.20.70 1 196 6.0E-58 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_4232 d7b93feb991f06ccf20515647291f7f1 196 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 2 191 1.4E-45 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_2119 9efc6af99ea33b844a590655918e6feb 265 Pfam PF01695 IstB-like ATP binding protein 105 237 2.1E-15 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_2119 9efc6af99ea33b844a590655918e6feb 265 SUPERFAMILY SSF52540 69 221 1.22E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2119 9efc6af99ea33b844a590655918e6feb 265 SMART SM00382 104 240 1.0E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2119 9efc6af99ea33b844a590655918e6feb 265 Gene3D G3DSA:3.40.50.300 52 242 2.1E-47 T 12-10-2018 Amet_1690 4d7c192f53b74228e727de82de94b4a1 122 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 2 114 5.1E-16 T 12-10-2018 IPR006542 Protein of unknown function DUF1093 Amet_1690 4d7c192f53b74228e727de82de94b4a1 122 Gene3D G3DSA:2.40.50.480 22 122 4.0E-25 T 12-10-2018 IPR036166 YxeA-like superfamily Amet_1690 4d7c192f53b74228e727de82de94b4a1 122 SUPERFAMILY SSF159121 22 116 3.66E-24 T 12-10-2018 IPR036166 YxeA-like superfamily Amet_1690 4d7c192f53b74228e727de82de94b4a1 122 Pfam PF06486 Protein of unknown function (DUF1093) 25 104 1.7E-20 T 12-10-2018 IPR006542 Protein of unknown function DUF1093 Amet_3652 6505fb968ba53ef7dbd677bcad598fb0 194 Pfam PF02525 Flavodoxin-like fold 2 189 1.4E-47 T 12-10-2018 IPR003680 Flavodoxin-like fold Amet_3652 6505fb968ba53ef7dbd677bcad598fb0 194 SUPERFAMILY SSF52218 1 194 3.14E-57 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_3652 6505fb968ba53ef7dbd677bcad598fb0 194 Gene3D G3DSA:3.40.50.360 1 194 1.3E-55 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1900 ddd98c48e7048dcb12d79a7a589b0e92 283 Pfam PF00092 von Willebrand factor type A domain 104 251 4.7E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A Amet_1900 ddd98c48e7048dcb12d79a7a589b0e92 283 SUPERFAMILY SSF53300 97 280 1.8E-13 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amet_1900 ddd98c48e7048dcb12d79a7a589b0e92 283 Gene3D G3DSA:3.40.50.410 95 281 4.2E-12 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amet_4574 60faff654519beca26cb3de22a3bb64f 604 TIGRFAM TIGR01178 ade: adenine deaminase 28 598 6.8E-146 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Amet_4574 60faff654519beca26cb3de22a3bb64f 604 Pfam PF13382 Adenine deaminase C-terminal domain 432 597 1.1E-58 T 12-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Amet_4574 60faff654519beca26cb3de22a3bb64f 604 Gene3D G3DSA:3.20.20.140 83 338 4.3E-116 T 12-10-2018 Amet_4574 60faff654519beca26cb3de22a3bb64f 604 Hamap MF_01518 Adenine deaminase [ade]. 28 600 32.56 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Amet_4574 60faff654519beca26cb3de22a3bb64f 604 Gene3D G3DSA:2.30.40.10 24 375 4.3E-116 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4574 60faff654519beca26cb3de22a3bb64f 604 Pfam PF01979 Amidohydrolase family 79 374 1.9E-21 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_4574 60faff654519beca26cb3de22a3bb64f 604 SUPERFAMILY SSF51338 21 385 5.16E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4574 60faff654519beca26cb3de22a3bb64f 604 SUPERFAMILY SSF51556 83 343 1.83E-24 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_4305 2b2f4e48faeedafe953cef834f896bbf 353 SUPERFAMILY SSF52922 239 351 2.09E-27 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_4305 2b2f4e48faeedafe953cef834f896bbf 353 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 242 1.7E-48 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amet_4305 2b2f4e48faeedafe953cef834f896bbf 353 SUPERFAMILY SSF52518 1 233 1.3E-59 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_4305 2b2f4e48faeedafe953cef834f896bbf 353 Gene3D G3DSA:3.40.50.970 1 189 1.5E-60 T 12-10-2018 Amet_4305 2b2f4e48faeedafe953cef834f896bbf 353 Gene3D G3DSA:3.40.50.920 235 350 1.9E-27 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_4305 2b2f4e48faeedafe953cef834f896bbf 353 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 247 341 2.4E-26 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Amet_3578 55bd70c6c2f7f656514d09efc4ad58cc 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 60.426 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3578 55bd70c6c2f7f656514d09efc4ad58cc 248 Pfam PF00121 Triosephosphate isomerase 5 246 2.7E-99 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3578 55bd70c6c2f7f656514d09efc4ad58cc 248 Gene3D G3DSA:3.20.20.70 1 248 2.5E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3578 55bd70c6c2f7f656514d09efc4ad58cc 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3578 55bd70c6c2f7f656514d09efc4ad58cc 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 6.7E-68 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3578 55bd70c6c2f7f656514d09efc4ad58cc 248 SUPERFAMILY SSF51351 1 247 7.59E-98 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_2631 12e7bb1270894e856bd7b86c94a3bf2d 288 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 77 4.6E-13 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Amet_2631 12e7bb1270894e856bd7b86c94a3bf2d 288 Pfam PF01380 SIS domain 132 257 2.8E-26 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amet_2631 12e7bb1270894e856bd7b86c94a3bf2d 288 SUPERFAMILY SSF53697 100 261 7.48E-31 T 12-10-2018 Amet_2631 12e7bb1270894e856bd7b86c94a3bf2d 288 Gene3D G3DSA:1.10.10.10 2 81 6.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2631 12e7bb1270894e856bd7b86c94a3bf2d 288 SUPERFAMILY SSF46689 7 83 4.3E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2631 12e7bb1270894e856bd7b86c94a3bf2d 288 Gene3D G3DSA:3.40.50.10490 98 283 4.1E-41 T 12-10-2018 Amet_4246 46c596c6cf40f1b84819af4889595ed6 220 SUPERFAMILY SSF100950 7 218 1.33E-72 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_4246 46c596c6cf40f1b84819af4889595ed6 220 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 46 54 - T 12-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 Amet_4246 46c596c6cf40f1b84819af4889595ed6 220 Gene3D G3DSA:3.40.1080.10 2 215 3.4E-94 T 12-10-2018 Amet_4246 46c596c6cf40f1b84819af4889595ed6 220 Pfam PF01144 Coenzyme A transferase 10 202 3.7E-42 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amet_4246 46c596c6cf40f1b84819af4889595ed6 220 SMART SM00882 8 203 4.9E-69 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Amet_4246 46c596c6cf40f1b84819af4889595ed6 220 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 209 8.1E-96 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 Amet_1009 cb9c8423b1de465e1a173c2febb884cb 435 Gene3D G3DSA:1.20.1250.20 16 209 3.2E-19 T 12-10-2018 Amet_1009 cb9c8423b1de465e1a173c2febb884cb 435 SUPERFAMILY SSF103473 13 420 1.44E-54 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_1009 cb9c8423b1de465e1a173c2febb884cb 435 Gene3D G3DSA:1.20.1250.20 233 430 1.2E-21 T 12-10-2018 Amet_1009 cb9c8423b1de465e1a173c2febb884cb 435 Pfam PF07690 Major Facilitator Superfamily 27 325 1.5E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_1184 cdf62fb1729cd3af2274b6667681c82b 178 Gene3D G3DSA:3.40.50.1000 1 175 1.8E-50 T 12-10-2018 IPR023214 HAD superfamily Amet_1184 cdf62fb1729cd3af2274b6667681c82b 178 SUPERFAMILY SSF56784 1 143 1.11E-37 T 12-10-2018 IPR036412 HAD-like superfamily Amet_1184 cdf62fb1729cd3af2274b6667681c82b 178 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 139 3.2E-32 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Amet_1184 cdf62fb1729cd3af2274b6667681c82b 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 142 8.6E-31 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Amet_1184 cdf62fb1729cd3af2274b6667681c82b 178 PIRSF PIRSF004682 1 178 4.5E-59 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 Amet_1184 cdf62fb1729cd3af2274b6667681c82b 178 Pfam PF13419 Haloacid dehalogenase-like hydrolase 19 140 8.8E-12 T 12-10-2018 Amet_4425 4264286e52c8bb2135292c39c5d4d4bb 290 Hamap MF_00206 Lipoyl synthase [lipA]. 1 290 136.837 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amet_4425 4264286e52c8bb2135292c39c5d4d4bb 290 Pfam PF04055 Radical SAM superfamily 59 218 7.6E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_4425 4264286e52c8bb2135292c39c5d4d4bb 290 PIRSF PIRSF005963 1 290 9.3E-131 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amet_4425 4264286e52c8bb2135292c39c5d4d4bb 290 SMART SM00729 52 256 1.4E-11 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_4425 4264286e52c8bb2135292c39c5d4d4bb 290 Gene3D G3DSA:3.20.20.70 30 262 4.7E-23 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_4425 4264286e52c8bb2135292c39c5d4d4bb 290 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 289 8.9E-120 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Amet_4425 4264286e52c8bb2135292c39c5d4d4bb 290 SUPERFAMILY SSF102114 17 279 6.28E-59 T 12-10-2018 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 262 2.1E-89 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 Pfam PF00696 Amino acid kinase family 10 240 1.4E-41 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 Gene3D G3DSA:3.40.1160.10 2 264 2.4E-81 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 SUPERFAMILY SSF53633 10 260 1.2E-64 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 PRINTS PR00474 Glutamate 5-kinase family signature 121 142 4.9E-45 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 4.9E-45 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 PRINTS PR00474 Glutamate 5-kinase family signature 81 109 4.9E-45 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 PRINTS PR00474 Glutamate 5-kinase family signature 153 180 4.9E-45 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 PRINTS PR00474 Glutamate 5-kinase family signature 214 234 4.9E-45 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 264 34.932 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 ProSitePatterns PS00902 Glutamate 5-kinase signature. 212 229 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amet_3645 fd14fc2df706c1d51086f9dc73c55f7c 264 PIRSF PIRSF000729 5 264 8.3E-92 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Amet_0646 947e72cd4155e5d1d3bd1877b2b2b7b4 375 SUPERFAMILY SSF48179 178 283 2.15E-29 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_0646 947e72cd4155e5d1d3bd1877b2b2b7b4 375 Pfam PF02153 Prephenate dehydrogenase 19 274 9.0E-70 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Amet_0646 947e72cd4155e5d1d3bd1877b2b2b7b4 375 Gene3D G3DSA:3.40.50.720 3 179 1.3E-54 T 12-10-2018 Amet_0646 947e72cd4155e5d1d3bd1877b2b2b7b4 375 SUPERFAMILY SSF51735 6 170 6.02E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0646 947e72cd4155e5d1d3bd1877b2b2b7b4 375 Gene3D G3DSA:3.30.70.260 295 359 2.0E-8 T 12-10-2018 Amet_0646 947e72cd4155e5d1d3bd1877b2b2b7b4 375 Gene3D G3DSA:1.10.3660.10 180 283 4.7E-32 T 12-10-2018 Amet_0646 947e72cd4155e5d1d3bd1877b2b2b7b4 375 SUPERFAMILY SSF55021 294 356 2.7E-9 T 12-10-2018 Amet_0646 947e72cd4155e5d1d3bd1877b2b2b7b4 375 Pfam PF01842 ACT domain 297 333 2.3E-7 T 12-10-2018 IPR002912 ACT domain Amet_1264 0cb3a07eef81e5d9e52eceebde537490 237 SUPERFAMILY SSF46785 6 75 4.24E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1264 0cb3a07eef81e5d9e52eceebde537490 237 SMART SM00895 96 217 4.6E-18 T 12-10-2018 IPR011711 GntR, C-terminal Amet_1264 0cb3a07eef81e5d9e52eceebde537490 237 Gene3D G3DSA:1.20.120.530 81 230 6.5E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_1264 0cb3a07eef81e5d9e52eceebde537490 237 SUPERFAMILY SSF48008 92 224 3.14E-22 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_1264 0cb3a07eef81e5d9e52eceebde537490 237 Pfam PF07729 FCD domain 96 217 1.8E-19 T 12-10-2018 IPR011711 GntR, C-terminal Amet_1264 0cb3a07eef81e5d9e52eceebde537490 237 Gene3D G3DSA:1.10.10.10 2 75 2.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1264 0cb3a07eef81e5d9e52eceebde537490 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 1.8E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1264 0cb3a07eef81e5d9e52eceebde537490 237 SMART SM00345 12 71 3.8E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_4264 76f55a9d8ebc741855ecfbbaa3fca977 98 Gene3D G3DSA:3.30.70.1060 1 92 2.4E-20 T 12-10-2018 Amet_4264 76f55a9d8ebc741855ecfbbaa3fca977 98 SUPERFAMILY SSF54909 3 88 2.95E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel Amet_4264 76f55a9d8ebc741855ecfbbaa3fca977 98 Pfam PF03795 YCII-related domain 1 89 2.3E-10 T 12-10-2018 IPR005545 YCII-related Amet_0038 1bdb7fa9d3a5386f684bda4193c960ad 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 182 7.1E-20 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain Amet_0038 1bdb7fa9d3a5386f684bda4193c960ad 204 Gene3D G3DSA:2.40.240.10 4 95 7.8E-22 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_0038 1bdb7fa9d3a5386f684bda4193c960ad 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 183 23.976 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amet_0038 1bdb7fa9d3a5386f684bda4193c960ad 204 Gene3D G3DSA:2.170.120.20 97 187 3.9E-20 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal Amet_0038 1bdb7fa9d3a5386f684bda4193c960ad 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 180 2.0E-39 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amet_0038 1bdb7fa9d3a5386f684bda4193c960ad 204 SUPERFAMILY SSF50715 10 182 1.2E-45 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Amet_0038 1bdb7fa9d3a5386f684bda4193c960ad 204 Pfam PF01386 Ribosomal L25p family 9 92 1.3E-19 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amet_0038 1bdb7fa9d3a5386f684bda4193c960ad 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 95 2.0E-49 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Amet_3891 49ae50fb117967ef6034bee353e39665 427 Gene3D G3DSA:3.40.50.11440 30 275 1.1E-134 T 12-10-2018 Amet_3891 49ae50fb117967ef6034bee353e39665 427 Pfam PF09861 Domain of unknown function (DUF2088) 8 206 8.6E-70 T 12-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 Amet_3891 49ae50fb117967ef6034bee353e39665 427 Gene3D G3DSA:3.90.226.30 7 419 1.1E-134 T 12-10-2018 Amet_0753 c672517e539392deb06d91cd048f4313 122 Pfam PF01381 Helix-turn-helix 12 66 1.8E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0753 c672517e539392deb06d91cd048f4313 122 Gene3D G3DSA:1.10.260.40 7 116 3.5E-20 T 12-10-2018 Amet_0753 c672517e539392deb06d91cd048f4313 122 SUPERFAMILY SSF47413 3 72 4.22E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0753 c672517e539392deb06d91cd048f4313 122 SMART SM00530 11 66 9.0E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_4539 34b229dcec6a49117186cb1b5dcc0134 136 SUPERFAMILY SSF54593 1 134 8.86E-40 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4539 34b229dcec6a49117186cb1b5dcc0134 136 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 5 132 9.3E-52 T 12-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 Amet_4539 34b229dcec6a49117186cb1b5dcc0134 136 Gene3D G3DSA:3.10.180.10 1 133 8.6E-49 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4539 34b229dcec6a49117186cb1b5dcc0134 136 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 117 3.2E-27 T 12-10-2018 Amet_0337 630683e71350f46e8fa94f649ef63b4f 159 Gene3D G3DSA:3.40.50.2300 2 159 5.3E-49 T 12-10-2018 Amet_0337 630683e71350f46e8fa94f649ef63b4f 159 SUPERFAMILY SSF52788 1 151 1.31E-39 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Amet_0337 630683e71350f46e8fa94f649ef63b4f 159 SMART SM00226 2 150 4.7E-38 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Amet_0337 630683e71350f46e8fa94f649ef63b4f 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.7E-7 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Amet_0337 630683e71350f46e8fa94f649ef63b4f 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 1.7E-7 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Amet_0337 630683e71350f46e8fa94f649ef63b4f 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 1.7E-7 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Amet_0337 630683e71350f46e8fa94f649ef63b4f 159 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 148 8.4E-36 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Amet_4459 b20f157816a1c2b71d9926805d4efaea 147 SUPERFAMILY SSF52080 4 146 2.75E-47 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Amet_4459 b20f157816a1c2b71d9926805d4efaea 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 4.4E-51 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4459 b20f157816a1c2b71d9926805d4efaea 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 145 2.5E-37 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P Amet_4459 b20f157816a1c2b71d9926805d4efaea 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 147 21.668 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Amet_4459 b20f157816a1c2b71d9926805d4efaea 147 Gene3D G3DSA:3.100.10.10 66 147 7.3E-25 T 12-10-2018 Amet_4459 b20f157816a1c2b71d9926805d4efaea 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2354 884afb3c033045f109872efb7ef2a058 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.7E-54 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Amet_2354 884afb3c033045f109872efb7ef2a058 149 SUPERFAMILY SSF69500 1 145 3.01E-55 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Amet_2354 884afb3c033045f109872efb7ef2a058 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.462 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Amet_2354 884afb3c033045f109872efb7ef2a058 149 Gene3D G3DSA:3.50.80.10 1 148 3.6E-55 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Amet_2354 884afb3c033045f109872efb7ef2a058 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.3E-53 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Amet_3784 4d3a07d328242cc3b3c643d45e1f16da 356 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 356 163.348 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Amet_3784 4d3a07d328242cc3b3c643d45e1f16da 356 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 355 9.2E-113 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Amet_3784 4d3a07d328242cc3b3c643d45e1f16da 356 Gene3D G3DSA:3.20.20.150 1 356 7.0E-141 T 12-10-2018 Amet_3784 4d3a07d328242cc3b3c643d45e1f16da 356 PIRSF PIRSF016049 1 356 4.5E-114 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Amet_3784 4d3a07d328242cc3b3c643d45e1f16da 356 SUPERFAMILY SSF51658 1 351 1.42E-83 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Amet_3784 4d3a07d328242cc3b3c643d45e1f16da 356 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 352 2.3E-142 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Amet_2650 091a66e9abab09178e0af7a53d0d00b6 282 Pfam PF00491 Arginase family 20 279 1.3E-75 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Amet_2650 091a66e9abab09178e0af7a53d0d00b6 282 SUPERFAMILY SSF52768 6 281 1.69E-78 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily Amet_2650 091a66e9abab09178e0af7a53d0d00b6 282 Gene3D G3DSA:3.40.800.10 13 282 2.3E-96 T 12-10-2018 Amet_2650 091a66e9abab09178e0af7a53d0d00b6 282 ProSitePatterns PS01053 Arginase family signature. 210 231 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Amet_2650 091a66e9abab09178e0af7a53d0d00b6 282 PIRSF PIRSF036979 1 282 4.8E-95 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 Amet_2650 091a66e9abab09178e0af7a53d0d00b6 282 TIGRFAM TIGR01230 agmatinase: agmatinase 9 280 4.1E-85 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 PIRSF PIRSF000513 5 269 5.4E-86 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 SUPERFAMILY SSF53613 11 263 8.42E-55 T 12-10-2018 IPR029056 Ribokinase-like Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 89 106 2.2E-35 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 63 71 2.2E-35 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 19 26 2.2E-35 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 164 181 2.2E-35 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 32 53 2.2E-35 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 120 134 2.2E-35 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 11 261 6.2E-84 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 Gene3D G3DSA:3.40.1190.20 1 269 1.3E-96 T 12-10-2018 IPR029056 Ribokinase-like Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 Pfam PF02110 Hydroxyethylthiazole kinase family 11 258 9.6E-81 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1248 1eccca8902ced6c0ec3e002eb348dacf 272 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 13 262 31.344 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_4432 275fcb73d4672dcf26003a2557075f43 305 Gene3D G3DSA:3.40.190.10 90 287 3.5E-45 T 12-10-2018 Amet_4432 275fcb73d4672dcf26003a2557075f43 305 Gene3D G3DSA:3.40.190.10 164 269 3.5E-45 T 12-10-2018 Amet_4432 275fcb73d4672dcf26003a2557075f43 305 SUPERFAMILY SSF46785 1 81 8.61E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4432 275fcb73d4672dcf26003a2557075f43 305 SUPERFAMILY SSF53850 89 290 1.71E-31 T 12-10-2018 Amet_4432 275fcb73d4672dcf26003a2557075f43 305 Gene3D G3DSA:1.10.10.10 1 89 1.0E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4432 275fcb73d4672dcf26003a2557075f43 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_4432 275fcb73d4672dcf26003a2557075f43 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_4432 275fcb73d4672dcf26003a2557075f43 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_4432 275fcb73d4672dcf26003a2557075f43 305 Pfam PF03466 LysR substrate binding domain 91 290 1.4E-32 T 12-10-2018 IPR005119 LysR, substrate-binding Amet_4432 275fcb73d4672dcf26003a2557075f43 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.6E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 2.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 SUPERFAMILY SSF51735 11 258 1.77E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.5E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 Gene3D G3DSA:3.40.50.720 3 258 5.9E-80 T 12-10-2018 Amet_0901 8827830e42b1095e7fca52f8301b28bf 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 256 1.3E-61 T 12-10-2018 Amet_3513 244518cb4212c3f995bc1ab2d285139c 344 Gene3D G3DSA:3.40.190.10 145 270 5.2E-55 T 12-10-2018 Amet_3513 244518cb4212c3f995bc1ab2d285139c 344 Gene3D G3DSA:3.40.190.150 53 325 5.2E-55 T 12-10-2018 Amet_3513 244518cb4212c3f995bc1ab2d285139c 344 PIRSF PIRSF017082 10 339 9.4E-52 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_3513 244518cb4212c3f995bc1ab2d285139c 344 SUPERFAMILY SSF53850 138 307 5.7E-6 T 12-10-2018 Amet_3513 244518cb4212c3f995bc1ab2d285139c 344 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 132 328 1.9E-30 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_3723 574edc2c3f4fe4084a6d493174314fa7 407 Gene3D G3DSA:3.40.50.360 249 402 1.6E-33 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_3723 574edc2c3f4fe4084a6d493174314fa7 407 PIRSF PIRSF005243 1 405 2.9E-120 T 12-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 Amet_3723 574edc2c3f4fe4084a6d493174314fa7 407 SUPERFAMILY SSF52218 246 370 5.59E-31 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_3723 574edc2c3f4fe4084a6d493174314fa7 407 SUPERFAMILY SSF56281 12 279 1.35E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_3723 574edc2c3f4fe4084a6d493174314fa7 407 SMART SM00849 34 223 3.0E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3723 574edc2c3f4fe4084a6d493174314fa7 407 Gene3D G3DSA:3.60.15.10 1 243 6.7E-81 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_3723 574edc2c3f4fe4084a6d493174314fa7 407 ProSitePatterns PS00201 Flavodoxin signature. 252 268 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Amet_3723 574edc2c3f4fe4084a6d493174314fa7 407 Pfam PF00258 Flavodoxin 252 386 3.2E-11 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Amet_3201 5a45e5d697ae22cd328b4a3908f933b2 375 Pfam PF03845 Spore germination protein 11 324 3.0E-48 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_3201 5a45e5d697ae22cd328b4a3908f933b2 375 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 11 367 8.8E-45 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 488 3.2E-209 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 Pfam PF01336 OB-fold nucleic acid binding domain 55 132 1.4E-15 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 SUPERFAMILY SSF50249 5 141 7.59E-37 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 13 491 44.332 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 Gene3D G3DSA:3.30.930.10 144 499 9.3E-136 T 12-10-2018 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 148 486 1.9E-81 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 SUPERFAMILY SSF55681 148 487 8.62E-122 T 12-10-2018 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 PIRSF PIRSF039101 1 499 2.8E-200 T 12-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 Gene3D G3DSA:2.40.50.140 7 141 1.2E-37 T 12-10-2018 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 185 195 5.5E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 201 217 5.5E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 248 265 5.5E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 230 243 5.5E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_4524 cbc1dd4bfa2f2711dfc9e78a68260e49 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 371 387 5.5E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 553 1.9E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 551 1.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 470 1.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 532 1.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Pfam PF07194 P2 response regulator binding domain 172 249 2.8E-24 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Pfam PF01627 Hpt domain 5 97 1.3E-19 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Pfam PF01584 CheW-like domain 558 682 2.3E-26 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 SUPERFAMILY SSF47384 307 367 1.92E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 SUPERFAMILY SSF55052 168 250 2.38E-22 T 12-10-2018 IPR035891 CheY-binding domain of CheA Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 SMART SM01231 306 366 2.5E-18 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 SMART SM00387 411 554 1.6E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 SUPERFAMILY SSF55874 368 552 8.91E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Gene3D G3DSA:1.20.120.160 1 142 4.3E-38 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Gene3D G3DSA:3.30.70.1110 168 252 2.6E-26 T 12-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Gene3D G3DSA:1.10.287.560 306 366 3.7E-21 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 SMART SM00073 3 100 2.5E-31 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 307 366 1.1E-16 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 SUPERFAMILY SSF47226 2 104 4.45E-31 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 SUPERFAMILY SSF50341 553 682 2.49E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Gene3D G3DSA:2.30.30.40 554 680 5.2E-42 T 12-10-2018 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Gene3D G3DSA:2.40.50.180 577 640 5.2E-42 T 12-10-2018 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 SMART SM00260 546 685 1.2E-35 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_2698 0f29c5ab765dd77c5c36fd389fd913b5 685 Gene3D G3DSA:3.30.565.10 367 553 5.3E-59 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2042 b1c54bd88bdb5f3569f1aec079cf883a 150 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 23 51 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Amet_2042 b1c54bd88bdb5f3569f1aec079cf883a 150 Gene3D G3DSA:1.10.530.10 11 150 6.3E-39 T 12-10-2018 Amet_2042 b1c54bd88bdb5f3569f1aec079cf883a 150 SUPERFAMILY SSF53955 19 148 2.88E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Amet_2042 b1c54bd88bdb5f3569f1aec079cf883a 150 Pfam PF01464 Transglycosylase SLT domain 15 112 5.4E-27 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Amet_3642 843612b49b3e64acd33283d608461487 305 Pfam PF04960 Glutaminase 19 305 1.9E-118 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Amet_3642 843612b49b3e64acd33283d608461487 305 SUPERFAMILY SSF56601 3 305 8.32E-112 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_3642 843612b49b3e64acd33283d608461487 305 TIGRFAM TIGR03814 Gln_ase: glutaminase A 5 305 4.7E-127 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Amet_3642 843612b49b3e64acd33283d608461487 305 Hamap MF_00313 Glutaminase [glsA]. 1 305 47.304 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Amet_3642 843612b49b3e64acd33283d608461487 305 Gene3D G3DSA:3.40.710.10 1 305 8.3E-118 T 12-10-2018 Amet_1021 4a861485f6638f016a00e73b32531f68 153 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 9.9E-61 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1021 4a861485f6638f016a00e73b32531f68 153 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 6.1E-62 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1021 4a861485f6638f016a00e73b32531f68 153 SUPERFAMILY SSF52121 3 153 2.62E-65 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1021 4a861485f6638f016a00e73b32531f68 153 Gene3D G3DSA:3.40.50.960 1 153 1.2E-65 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1021 4a861485f6638f016a00e73b32531f68 153 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 31.734 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_3324 1e2cf3e75aa30f7183c40e9d3162f5ca 350 Pfam PF13556 PucR C-terminal helix-turn-helix domain 279 331 1.3E-16 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amet_3324 1e2cf3e75aa30f7183c40e9d3162f5ca 350 Gene3D G3DSA:1.10.10.2840 215 339 4.3E-15 T 12-10-2018 Amet_3649 ffe2d4b12c4c790d36c05e55d94ed09d 192 Gene3D G3DSA:1.10.8.1150 123 192 5.3E-7 T 12-10-2018 Amet_1657 8a835db08e375909423a4cb6218ada37 387 SUPERFAMILY SSF56796 6 386 1.06E-136 T 12-10-2018 Amet_1657 8a835db08e375909423a4cb6218ada37 387 Gene3D G3DSA:3.40.50.1970 2 188 4.6E-59 T 12-10-2018 Amet_1657 8a835db08e375909423a4cb6218ada37 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Amet_1657 8a835db08e375909423a4cb6218ada37 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Amet_1657 8a835db08e375909423a4cb6218ada37 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 13 379 2.6E-128 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Amet_1657 8a835db08e375909423a4cb6218ada37 387 Gene3D G3DSA:1.20.1090.10 190 387 1.5E-76 T 12-10-2018 Amet_2006 38749221c1f49a7a3f27e4d83a9139f2 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 272 7.6E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2006 38749221c1f49a7a3f27e4d83a9139f2 273 SUPERFAMILY SSF161098 68 255 8.63E-23 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2006 38749221c1f49a7a3f27e4d83a9139f2 273 Gene3D G3DSA:1.10.3720.10 64 269 2.5E-20 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3765 87f6803d68cbfd8c7ebabebbe4c81574 157 Gene3D G3DSA:3.30.70.20 13 155 3.4E-28 T 12-10-2018 Amet_3765 87f6803d68cbfd8c7ebabebbe4c81574 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3765 87f6803d68cbfd8c7ebabebbe4c81574 157 SUPERFAMILY SSF54862 10 155 1.26E-38 T 12-10-2018 Amet_3765 87f6803d68cbfd8c7ebabebbe4c81574 157 Pfam PF13247 4Fe-4S dicluster domain 62 155 2.6E-16 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_3765 87f6803d68cbfd8c7ebabebbe4c81574 157 Gene3D G3DSA:3.30.70.20 72 129 3.4E-28 T 12-10-2018 Amet_2866 77a3da3f7ac7f006b036f2f053e3aff6 229 Pfam PF00072 Response regulator receiver domain 6 118 9.6E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2866 77a3da3f7ac7f006b036f2f053e3aff6 229 SUPERFAMILY SSF52172 1 132 2.28E-44 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2866 77a3da3f7ac7f006b036f2f053e3aff6 229 Gene3D G3DSA:1.10.10.10 133 229 2.7E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2866 77a3da3f7ac7f006b036f2f053e3aff6 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 5.1E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_2866 77a3da3f7ac7f006b036f2f053e3aff6 229 SUPERFAMILY SSF46894 135 228 5.67E-32 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_2866 77a3da3f7ac7f006b036f2f053e3aff6 229 SMART SM00448 4 117 3.2E-46 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2866 77a3da3f7ac7f006b036f2f053e3aff6 229 Gene3D G3DSA:3.40.50.2300 1 132 1.1E-41 T 12-10-2018 Amet_2866 77a3da3f7ac7f006b036f2f053e3aff6 229 SMART SM00862 153 228 1.7E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_4131 dbca21f42b0b1ffd0bcc5a5b211521f6 228 SUPERFAMILY SSF52540 1 220 2.23E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4131 dbca21f42b0b1ffd0bcc5a5b211521f6 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4131 dbca21f42b0b1ffd0bcc5a5b211521f6 228 Pfam PF00005 ABC transporter 18 165 1.2E-39 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4131 dbca21f42b0b1ffd0bcc5a5b211521f6 228 Gene3D G3DSA:3.40.50.300 1 226 1.1E-73 T 12-10-2018 Amet_4131 dbca21f42b0b1ffd0bcc5a5b211521f6 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.6E-91 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Amet_4131 dbca21f42b0b1ffd0bcc5a5b211521f6 228 SMART SM00382 27 214 1.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2318 cf7996fa877b07c4a54d45579b61b33d 291 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 3 290 3.6E-111 T 12-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Amet_2318 cf7996fa877b07c4a54d45579b61b33d 291 Pfam PF03313 Serine dehydratase alpha chain 16 276 5.8E-74 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Amet_1376 acde6463a5d6998c5dd09a8e326805e2 279 SUPERFAMILY SSF53681 112 268 1.57E-25 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_1376 acde6463a5d6998c5dd09a8e326805e2 279 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 215 2.2E-27 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_1376 acde6463a5d6998c5dd09a8e326805e2 279 SUPERFAMILY SSF53681 9 109 1.57E-33 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_1376 acde6463a5d6998c5dd09a8e326805e2 279 Hamap MF_00258 Glutamate racemase [murI]. 8 264 33.951 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_1376 acde6463a5d6998c5dd09a8e326805e2 279 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_1376 acde6463a5d6998c5dd09a8e326805e2 279 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 231 2.8E-67 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_1376 acde6463a5d6998c5dd09a8e326805e2 279 Gene3D G3DSA:3.40.50.1860 99 210 1.3E-77 T 12-10-2018 Amet_1376 acde6463a5d6998c5dd09a8e326805e2 279 Gene3D G3DSA:3.40.50.1860 9 238 1.3E-77 T 12-10-2018 Amet_0198 46b864e90e698573c940ac9ff3f12613 112 Gene3D G3DSA:3.30.700.10 8 97 1.3E-13 T 12-10-2018 Amet_0198 46b864e90e698573c940ac9ff3f12613 112 SUPERFAMILY SSF54523 8 63 1.02E-13 T 12-10-2018 Amet_0198 46b864e90e698573c940ac9ff3f12613 112 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 5.5E-10 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Amet_0198 46b864e90e698573c940ac9ff3f12613 112 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 5.5E-10 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Amet_0198 46b864e90e698573c940ac9ff3f12613 112 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 6.0E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_0198 46b864e90e698573c940ac9ff3f12613 112 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 2.4E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_3764 2b19c292f77bbe1e20347df54baf7171 640 Gene3D G3DSA:3.40.50.2030 231 399 6.2E-68 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_3764 2b19c292f77bbe1e20347df54baf7171 640 Gene3D G3DSA:1.20.1270.30 57 230 2.0E-62 T 12-10-2018 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Amet_3764 2b19c292f77bbe1e20347df54baf7171 640 PIRSF PIRSF005023 3 633 1.6E-235 T 12-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Amet_3764 2b19c292f77bbe1e20347df54baf7171 640 Pfam PF03063 Prismane/CO dehydrogenase family 42 612 4.6E-165 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Amet_3764 2b19c292f77bbe1e20347df54baf7171 640 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 9 631 4.9E-223 T 12-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Amet_3764 2b19c292f77bbe1e20347df54baf7171 640 SUPERFAMILY SSF56821 11 634 6.41E-200 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Amet_3764 2b19c292f77bbe1e20347df54baf7171 640 Gene3D G3DSA:3.40.50.2030 402 629 5.3E-90 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_3691 aea4e389d24a86d16513bbc087763f81 160 Pfam PF01966 HD domain 46 144 7.2E-7 T 12-10-2018 IPR006674 HD domain Amet_3691 aea4e389d24a86d16513bbc087763f81 160 TIGRFAM TIGR00277 HDIG: HDIG domain 63 140 2.5E-7 T 12-10-2018 IPR006675 HDIG domain Amet_3691 aea4e389d24a86d16513bbc087763f81 160 SUPERFAMILY SSF109604 42 143 2.92E-10 T 12-10-2018 Amet_3691 aea4e389d24a86d16513bbc087763f81 160 Gene3D G3DSA:1.10.3210.10 16 146 6.0E-15 T 12-10-2018 Amet_2195 f7d3d2c5c7af14235feb37862d07dec0 330 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 315 24.879 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Amet_2195 f7d3d2c5c7af14235feb37862d07dec0 330 Gene3D G3DSA:3.100.10.20 2 81 2.7E-25 T 12-10-2018 Amet_2195 f7d3d2c5c7af14235feb37862d07dec0 330 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 4 324 2.0E-94 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Amet_2195 f7d3d2c5c7af14235feb37862d07dec0 330 TIGRFAM TIGR03641 cas1_HMARI: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP 4 330 4.4E-130 T 12-10-2018 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype GO:0004520|GO:0043571|GO:0046872 Amet_2195 f7d3d2c5c7af14235feb37862d07dec0 330 Pfam PF01867 CRISPR associated protein Cas1 6 284 1.3E-90 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Amet_2195 f7d3d2c5c7af14235feb37862d07dec0 330 Gene3D G3DSA:1.20.120.920 83 326 2.2E-66 T 12-10-2018 Amet_0613 dc8fa1a0a40a5b4ad17af60c042a32c1 143 SUPERFAMILY SSF101801 60 139 3.01E-21 T 12-10-2018 IPR036429 SpoA-like superfamily Amet_0613 dc8fa1a0a40a5b4ad17af60c042a32c1 143 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 61 135 7.6E-28 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Amet_0613 dc8fa1a0a40a5b4ad17af60c042a32c1 143 Gene3D G3DSA:2.30.330.10 51 143 2.0E-29 T 12-10-2018 IPR036429 SpoA-like superfamily Amet_0613 dc8fa1a0a40a5b4ad17af60c042a32c1 143 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 64 134 1.9E-21 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) Amet_0613 dc8fa1a0a40a5b4ad17af60c042a32c1 143 PRINTS PR00956 Flagellar motor switch protein FliN signature 110 125 6.2E-23 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amet_0613 dc8fa1a0a40a5b4ad17af60c042a32c1 143 PRINTS PR00956 Flagellar motor switch protein FliN signature 64 80 6.2E-23 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amet_0613 dc8fa1a0a40a5b4ad17af60c042a32c1 143 PRINTS PR00956 Flagellar motor switch protein FliN signature 97 110 6.2E-23 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amet_0613 dc8fa1a0a40a5b4ad17af60c042a32c1 143 PRINTS PR00956 Flagellar motor switch protein FliN signature 81 97 6.2E-23 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Amet_0309 f457f78e4d36efad4585e873ba940203 231 Pfam PF16316 Domain of unknown function (DUF4956) 33 149 1.3E-14 T 12-10-2018 IPR032531 Protein of unknown function DUF4956 Amet_3182 cf78937cf811a4d285b98a491115faf6 382 Gene3D G3DSA:1.10.3860.10 2 380 8.3E-58 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Amet_3182 cf78937cf811a4d285b98a491115faf6 382 Pfam PF00375 Sodium:dicarboxylate symporter family 6 377 2.0E-84 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Amet_3182 cf78937cf811a4d285b98a491115faf6 382 PRINTS PR00173 Glutamate-aspartate symporter signature 268 294 4.4E-9 T 12-10-2018 Amet_3182 cf78937cf811a4d285b98a491115faf6 382 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 4.4E-9 T 12-10-2018 Amet_3182 cf78937cf811a4d285b98a491115faf6 382 PRINTS PR00173 Glutamate-aspartate symporter signature 303 322 4.4E-9 T 12-10-2018 Amet_3182 cf78937cf811a4d285b98a491115faf6 382 PRINTS PR00173 Glutamate-aspartate symporter signature 71 96 4.4E-9 T 12-10-2018 Amet_3182 cf78937cf811a4d285b98a491115faf6 382 SUPERFAMILY SSF118215 6 377 5.1E-83 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Amet_0584 7eefc873513ac221ff28d1d056d0cadf 792 Pfam PF02901 Pyruvate formate lyase-like 10 654 7.1E-230 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Amet_0584 7eefc873513ac221ff28d1d056d0cadf 792 Pfam PF01228 Glycine radical 671 773 5.0E-32 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 Amet_0584 7eefc873513ac221ff28d1d056d0cadf 792 Gene3D G3DSA:3.20.70.40 7 792 3.5E-280 T 12-10-2018 Amet_0584 7eefc873513ac221ff28d1d056d0cadf 792 SUPERFAMILY SSF51998 7 790 2.2E-242 T 12-10-2018 Amet_0584 7eefc873513ac221ff28d1d056d0cadf 792 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 9 790 1.2E-208 T 12-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Amet_0204 3229144746f9d81e1d77367a938408f6 286 Gene3D G3DSA:3.40.50.720 1 286 7.2E-44 T 12-10-2018 Amet_0204 3229144746f9d81e1d77367a938408f6 286 Pfam PF13460 NAD(P)H-binding 6 140 4.5E-19 T 12-10-2018 IPR016040 NAD(P)-binding domain Amet_0204 3229144746f9d81e1d77367a938408f6 286 SUPERFAMILY SSF51735 2 278 7.16E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4768 61f789c836cff90823f7432b6b7bcb8f 447 SUPERFAMILY SSF48024 9 120 3.14E-35 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Amet_4768 61f789c836cff90823f7432b6b7bcb8f 447 Gene3D G3DSA:1.10.860.10 4 167 1.4E-54 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Amet_4768 61f789c836cff90823f7432b6b7bcb8f 447 Gene3D G3DSA:3.40.50.300 168 447 2.6E-107 T 12-10-2018 Amet_4768 61f789c836cff90823f7432b6b7bcb8f 447 SUPERFAMILY SSF52540 184 433 5.11E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4768 61f789c836cff90823f7432b6b7bcb8f 447 Pfam PF00772 DnaB-like helicase N terminal domain 11 111 2.4E-33 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Amet_4768 61f789c836cff90823f7432b6b7bcb8f 447 Pfam PF03796 DnaB-like helicase C terminal domain 186 439 2.1E-110 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Amet_4768 61f789c836cff90823f7432b6b7bcb8f 447 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 11 442 5.6E-174 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Amet_1465 39d951faa91b16524fcb79aac2c8e7cc 290 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 100 111 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_1465 39d951faa91b16524fcb79aac2c8e7cc 290 Gene3D G3DSA:3.30.70.20 63 119 1.3E-12 T 12-10-2018 Amet_1465 39d951faa91b16524fcb79aac2c8e7cc 290 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 258 3.7E-14 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_1465 39d951faa91b16524fcb79aac2c8e7cc 290 SUPERFAMILY SSF54862 48 120 7.26E-18 T 12-10-2018 Amet_1465 39d951faa91b16524fcb79aac2c8e7cc 290 Pfam PF13187 4Fe-4S dicluster domain 71 114 1.3E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_1465 39d951faa91b16524fcb79aac2c8e7cc 290 SUPERFAMILY SSF52540 7 280 2.32E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4236 f722836ffbc254f68ee423df2a12aeb2 268 Pfam PF00899 ThiF family 77 266 2.1E-33 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Amet_4236 f722836ffbc254f68ee423df2a12aeb2 268 Pfam PF14453 ThiS-like ubiquitin 1 57 3.3E-23 T 12-10-2018 IPR032726 ThiS-like ubiquitin domain Amet_4236 f722836ffbc254f68ee423df2a12aeb2 268 SUPERFAMILY SSF69572 75 266 4.45E-46 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Amet_4236 f722836ffbc254f68ee423df2a12aeb2 268 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 63 262 9.8E-89 T 12-10-2018 IPR012729 Thiamine biosynthesis protein ThiF Amet_4236 f722836ffbc254f68ee423df2a12aeb2 268 Gene3D G3DSA:3.40.50.720 75 235 2.8E-41 T 12-10-2018 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 4.1E-58 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 Gene3D G3DSA:3.40.50.10860 7 275 1.4E-91 T 12-10-2018 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 SUPERFAMILY SSF53223 2 120 1.15E-27 T 12-10-2018 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 282 32.85 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 Gene3D G3DSA:3.40.50.720 5 258 1.4E-91 T 12-10-2018 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 119 2.4E-30 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 SUPERFAMILY SSF51735 121 279 8.21E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 7.6E-59 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 7.6E-59 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 7.6E-59 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 7.6E-59 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 7.6E-59 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 7.6E-59 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2020 52812b0a33e6d5b2ca141388a3a8cf63 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 7.6E-59 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Amet_2210 f5c8958bfb661b834c6c70bd8d5610ca 248 Pfam PF13353 4Fe-4S single cluster domain 16 147 3.7E-23 T 12-10-2018 Amet_2210 f5c8958bfb661b834c6c70bd8d5610ca 248 Pfam PF04055 Radical SAM superfamily 24 181 1.3E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_2210 f5c8958bfb661b834c6c70bd8d5610ca 248 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 235 3.4E-98 T 12-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 Amet_2210 f5c8958bfb661b834c6c70bd8d5610ca 248 Gene3D G3DSA:3.20.20.70 2 244 3.4E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2210 f5c8958bfb661b834c6c70bd8d5610ca 248 PIRSF PIRSF000371 45 246 3.2E-51 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Amet_2210 f5c8958bfb661b834c6c70bd8d5610ca 248 PIRSF PIRSF000371 1 47 8.1E-15 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Amet_2210 f5c8958bfb661b834c6c70bd8d5610ca 248 SUPERFAMILY SSF102114 22 237 1.7E-31 T 12-10-2018 Amet_2210 f5c8958bfb661b834c6c70bd8d5610ca 248 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 48 236 4.4E-55 T 12-10-2018 Amet_2210 f5c8958bfb661b834c6c70bd8d5610ca 248 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Amet_1445 9167b219cff735585a1a99b05842d7d6 588 Pfam PF01814 Hemerythrin HHE cation binding domain 173 293 7.2E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Amet_1445 9167b219cff735585a1a99b05842d7d6 588 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 23 73 1.6E-5 T 12-10-2018 IPR018720 Domain of unknown function DUF2249 Amet_1445 9167b219cff735585a1a99b05842d7d6 588 Pfam PF08984 Domain of unknown function (DUF1858) 517 577 7.6E-16 T 12-10-2018 IPR015077 Domain of unknown function DUF1858 Amet_1445 9167b219cff735585a1a99b05842d7d6 588 SUPERFAMILY SSF55785 372 475 1.26E-6 T 12-10-2018 IPR035965 PAS domain superfamily Amet_1445 9167b219cff735585a1a99b05842d7d6 588 Gene3D G3DSA:3.30.450.20 402 489 1.1E-5 T 12-10-2018 Amet_1445 9167b219cff735585a1a99b05842d7d6 588 Gene3D G3DSA:1.20.120.520 165 389 1.1E-44 T 12-10-2018 Amet_1445 9167b219cff735585a1a99b05842d7d6 588 Pfam PF13596 PAS domain 375 480 2.8E-27 T 12-10-2018 Amet_1445 9167b219cff735585a1a99b05842d7d6 588 SUPERFAMILY SSF140683 514 585 5.89E-13 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Amet_1445 9167b219cff735585a1a99b05842d7d6 588 Gene3D G3DSA:1.10.3910.10 511 584 5.2E-8 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Amet_0033 9209d6801cd4299275bde8a755591778 146 Pfam PF00436 Single-strand binding protein family 1 99 6.8E-36 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Amet_0033 9209d6801cd4299275bde8a755591778 146 PIRSF PIRSF002070 1 143 1.3E-38 T 12-10-2018 Amet_0033 9209d6801cd4299275bde8a755591778 146 Gene3D G3DSA:2.40.50.140 1 109 5.8E-42 T 12-10-2018 Amet_0033 9209d6801cd4299275bde8a755591778 146 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 146 3.4E-39 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Amet_0033 9209d6801cd4299275bde8a755591778 146 SUPERFAMILY SSF50249 1 146 4.11E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_0033 9209d6801cd4299275bde8a755591778 146 Hamap MF_00984 Single-stranded DNA-binding protein. 1 103 33.361 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Amet_0592 d72fb1c960113a22b95aef91766e1c6d 327 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 8 326 1.5E-100 T 12-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 Amet_0592 d72fb1c960113a22b95aef91766e1c6d 327 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 314 2.8E-43 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_0592 d72fb1c960113a22b95aef91766e1c6d 327 SUPERFAMILY SSF53686 8 320 9.95E-79 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_0592 d72fb1c960113a22b95aef91766e1c6d 327 PIRSF PIRSF006278 1 327 1.5E-93 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Amet_0592 d72fb1c960113a22b95aef91766e1c6d 327 Gene3D G3DSA:3.40.50.1100 46 152 1.1E-106 T 12-10-2018 Amet_0592 d72fb1c960113a22b95aef91766e1c6d 327 Gene3D G3DSA:3.40.50.1100 8 318 1.1E-106 T 12-10-2018 Amet_0519 ad6529f5168c23fbd91c493b8467013f 224 Pfam PF00005 ABC transporter 18 165 3.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0519 ad6529f5168c23fbd91c493b8467013f 224 SMART SM00382 27 215 5.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0519 ad6529f5168c23fbd91c493b8467013f 224 Gene3D G3DSA:3.40.50.300 1 220 2.4E-54 T 12-10-2018 Amet_0519 ad6529f5168c23fbd91c493b8467013f 224 SUPERFAMILY SSF52540 2 209 1.82E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 Gene3D G3DSA:1.10.220.30 200 339 3.9E-52 T 12-10-2018 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 Gene3D G3DSA:1.10.220.30 5 90 2.5E-21 T 12-10-2018 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 SUPERFAMILY SSF48029 119 330 1.02E-72 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 SUPERFAMILY SSF48029 11 105 3.4E-23 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 339 1.5E-142 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 PIRSF PIRSF003161 4 339 2.4E-126 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 1.1E-77 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 Pfam PF14841 FliG middle domain 120 194 1.3E-31 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 Pfam PF01706 FliG C-terminal domain 223 329 5.0E-45 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 Gene3D G3DSA:1.10.220.30 108 199 3.2E-34 T 12-10-2018 Amet_0609 ed435ad01f12e1966ebc557b0e3f290b 339 Pfam PF14842 FliG N-terminal domain 9 112 1.3E-38 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Amet_2767 8494d11f4e36e9401491fef1883acc52 157 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 157 35.808 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amet_2767 8494d11f4e36e9401491fef1883acc52 157 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 1.4E-16 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amet_2767 8494d11f4e36e9401491fef1883acc52 157 SUPERFAMILY SSF52374 1 155 4.35E-48 T 12-10-2018 Amet_2767 8494d11f4e36e9401491fef1883acc52 157 Gene3D G3DSA:3.40.50.620 1 157 1.4E-61 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_2767 8494d11f4e36e9401491fef1883acc52 157 Pfam PF01467 Cytidylyltransferase-like 5 133 6.7E-22 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Amet_2767 8494d11f4e36e9401491fef1883acc52 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 2.4E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amet_2767 8494d11f4e36e9401491fef1883acc52 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.4E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amet_2767 8494d11f4e36e9401491fef1883acc52 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.4E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amet_2767 8494d11f4e36e9401491fef1883acc52 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 2.4E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amet_2767 8494d11f4e36e9401491fef1883acc52 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.4E-51 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amet_2767 8494d11f4e36e9401491fef1883acc52 157 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 156 4.7E-65 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Amet_1580 0175eef4b1b1d6685979b3b257e59e4b 203 SUPERFAMILY SSF50475 4 199 1.91E-43 T 12-10-2018 Amet_1580 0175eef4b1b1d6685979b3b257e59e4b 203 Pfam PF01613 Flavin reductase like domain 23 170 1.2E-19 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amet_1580 0175eef4b1b1d6685979b3b257e59e4b 203 Gene3D G3DSA:2.30.110.10 1 203 5.8E-64 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amet_1580 0175eef4b1b1d6685979b3b257e59e4b 203 SMART SM00903 20 177 1.7E-24 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amet_0057 94ca006d9cadf50d8bdd9de4c8bd44f3 411 SUPERFAMILY SSF53383 1 408 1.53E-96 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_0057 94ca006d9cadf50d8bdd9de4c8bd44f3 411 Gene3D G3DSA:3.90.1150.10 275 410 1.8E-41 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0057 94ca006d9cadf50d8bdd9de4c8bd44f3 411 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 408 9.1E-121 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_0057 94ca006d9cadf50d8bdd9de4c8bd44f3 411 PIRSF PIRSF001434 1 411 1.8E-115 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_0057 94ca006d9cadf50d8bdd9de4c8bd44f3 411 Gene3D G3DSA:3.40.640.10 2 274 2.4E-79 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0344 6b4bda7f25900545961fc84a40040c60 75 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 12 63 7.5E-17 T 12-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 Gene3D G3DSA:3.90.1310.30 47 218 1.5E-43 T 12-10-2018 Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 SUPERFAMILY SSF56601 170 588 2.29E-102 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 Pfam PF03793 PASTA domain 598 657 3.5E-7 T 12-10-2018 IPR005543 PASTA domain Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 Pfam PF03793 PASTA domain 667 720 2.6E-10 T 12-10-2018 IPR005543 PASTA domain Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 SUPERFAMILY SSF54184 667 721 4.58E-10 T 12-10-2018 Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 SUPERFAMILY SSF56519 48 219 1.57E-40 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 Pfam PF00905 Penicillin binding protein transpeptidase domain 245 573 2.1E-77 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 Pfam PF03717 Penicillin-binding Protein dimerisation domain 55 200 2.1E-18 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 Gene3D G3DSA:3.30.10.20 592 657 1.3E-5 T 12-10-2018 Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 Gene3D G3DSA:3.30.10.20 665 723 2.3E-7 T 12-10-2018 Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 SMART SM00740 663 722 1.6E-8 T 12-10-2018 IPR005543 PASTA domain Amet_2885 9778fa6967b58bd11fcc39cbe6f91f62 723 SMART SM00740 594 659 2.5E-5 T 12-10-2018 IPR005543 PASTA domain Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 169.556 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 5.1E-35 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 4.0E-40 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 Gene3D G3DSA:1.10.8.60 187 261 5.6E-31 T 12-10-2018 Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 Gene3D G3DSA:3.40.50.300 24 186 2.4E-43 T 12-10-2018 Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 SUPERFAMILY SSF52540 25 253 1.68E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 30 331 5.3E-147 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 240 2.1E-119 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 Gene3D G3DSA:1.10.10.10 262 336 1.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 SMART SM00382 56 187 6.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2339 48db75b8a88eb1019df12a7c8d5cfeba 336 SUPERFAMILY SSF46785 261 332 1.09E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4725 f6bebfe2f7e1495fc5b61ea0ab8bdc0c 288 ProSitePatterns PS00934 Glyoxalase I signature 1. 14 35 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Amet_4725 f6bebfe2f7e1495fc5b61ea0ab8bdc0c 288 SUPERFAMILY SSF54593 171 284 6.98E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4725 f6bebfe2f7e1495fc5b61ea0ab8bdc0c 288 SUPERFAMILY SSF54593 7 166 1.88E-34 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4725 f6bebfe2f7e1495fc5b61ea0ab8bdc0c 288 Gene3D G3DSA:3.10.180.10 11 134 9.1E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4725 f6bebfe2f7e1495fc5b61ea0ab8bdc0c 288 ProSitePatterns PS00934 Glyoxalase I signature 1. 173 194 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Amet_4725 f6bebfe2f7e1495fc5b61ea0ab8bdc0c 288 Gene3D G3DSA:3.10.180.10 170 288 1.4E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4725 f6bebfe2f7e1495fc5b61ea0ab8bdc0c 288 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 125 3.6E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amet_4725 f6bebfe2f7e1495fc5b61ea0ab8bdc0c 288 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 171 279 6.0E-5 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amet_2612 0eb7cda38efa7c753108ef84d1395d3b 74 SUPERFAMILY SSF47413 3 64 2.59E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2612 0eb7cda38efa7c753108ef84d1395d3b 74 Pfam PF01381 Helix-turn-helix 5 60 9.0E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2612 0eb7cda38efa7c753108ef84d1395d3b 74 SMART SM00530 4 60 8.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2612 0eb7cda38efa7c753108ef84d1395d3b 74 Gene3D G3DSA:1.10.260.40 1 73 2.3E-12 T 12-10-2018 Amet_1610 531e34cc349a925b4bc1e3776bef3485 1675 SUPERFAMILY SSF55874 25 147 2.65E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1610 531e34cc349a925b4bc1e3776bef3485 1675 Pfam PF00656 Caspase domain 1420 1656 1.2E-12 T 12-10-2018 Amet_1610 531e34cc349a925b4bc1e3776bef3485 1675 Gene3D G3DSA:3.30.950.30 1275 1403 1.7E-10 T 12-10-2018 IPR038461 Schlafen, AAA domain superfamily Amet_1610 531e34cc349a925b4bc1e3776bef3485 1675 Gene3D G3DSA:3.40.50.1460 1417 1667 3.2E-17 T 12-10-2018 Amet_1610 531e34cc349a925b4bc1e3776bef3485 1675 SUPERFAMILY SSF52129 1410 1616 3.24E-8 T 12-10-2018 IPR029030 Caspase-like domain superfamily Amet_1610 531e34cc349a925b4bc1e3776bef3485 1675 Pfam PF04326 Putative DNA-binding domain 1304 1390 7.9E-8 T 12-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Amet_1610 531e34cc349a925b4bc1e3776bef3485 1675 Gene3D G3DSA:3.30.565.10 22 242 4.7E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4125 e80612fd2c45d5df19aa7880a62147d7 183 SUPERFAMILY SSF55383 21 80 1.7E-8 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_4125 e80612fd2c45d5df19aa7880a62147d7 183 Gene3D G3DSA:3.30.457.10 60 98 3.8E-5 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_4125 e80612fd2c45d5df19aa7880a62147d7 183 Pfam PF07833 Copper amine oxidase N-terminal domain 24 84 1.7E-9 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_3262 5f58c18e7f4a0fe63557bc4f45ab733e 349 SUPERFAMILY SSF54001 224 348 2.06E-39 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amet_3262 5f58c18e7f4a0fe63557bc4f45ab733e 349 Pfam PF00395 S-layer homology domain 149 191 1.9E-12 T 12-10-2018 IPR001119 S-layer homology domain Amet_3262 5f58c18e7f4a0fe63557bc4f45ab733e 349 Pfam PF00395 S-layer homology domain 31 74 1.1E-14 T 12-10-2018 IPR001119 S-layer homology domain Amet_3262 5f58c18e7f4a0fe63557bc4f45ab733e 349 Pfam PF00877 NlpC/P60 family 241 337 4.5E-26 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amet_3262 5f58c18e7f4a0fe63557bc4f45ab733e 349 Gene3D G3DSA:3.90.1720.10 188 339 6.0E-44 T 12-10-2018 Amet_3043 295bb40debd14b54edafec9305f31e22 114 PRINTS PR00332 Histidine triad family signature 4 20 4.7E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Amet_3043 295bb40debd14b54edafec9305f31e22 114 PRINTS PR00332 Histidine triad family signature 94 104 4.7E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Amet_3043 295bb40debd14b54edafec9305f31e22 114 PRINTS PR00332 Histidine triad family signature 25 43 4.7E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Amet_3043 295bb40debd14b54edafec9305f31e22 114 SUPERFAMILY SSF54197 2 113 1.35E-37 T 12-10-2018 IPR036265 HIT-like superfamily Amet_3043 295bb40debd14b54edafec9305f31e22 114 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 12-10-2018 IPR019808 Histidine triad, conserved site Amet_3043 295bb40debd14b54edafec9305f31e22 114 Gene3D G3DSA:3.30.428.10 1 114 3.1E-39 T 12-10-2018 IPR036265 HIT-like superfamily Amet_3043 295bb40debd14b54edafec9305f31e22 114 Pfam PF01230 HIT domain 11 108 6.8E-28 T 12-10-2018 IPR001310 Histidine triad (HIT) protein Amet_3706 3d442946f0d277206a68ce9e81effdc1 380 SUPERFAMILY SSF53383 4 377 5.56E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3706 3d442946f0d277206a68ce9e81effdc1 380 Gene3D G3DSA:3.90.1150.10 246 380 2.4E-47 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3706 3d442946f0d277206a68ce9e81effdc1 380 PIRSF PIRSF001434 1 380 1.2E-143 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_3706 3d442946f0d277206a68ce9e81effdc1 380 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_3706 3d442946f0d277206a68ce9e81effdc1 380 Gene3D G3DSA:3.40.640.10 1 245 3.1E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3706 3d442946f0d277206a68ce9e81effdc1 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 376 8.0E-148 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Amet_3894 44f06595aa4799a912a9b9a0b591065c 354 Gene3D G3DSA:3.40.50.300 1 256 1.1E-82 T 12-10-2018 Amet_3894 44f06595aa4799a912a9b9a0b591065c 354 SMART SM00382 30 218 3.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3894 44f06595aa4799a912a9b9a0b591065c 354 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3894 44f06595aa4799a912a9b9a0b591065c 354 Pfam PF00005 ABC transporter 21 169 5.5E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3894 44f06595aa4799a912a9b9a0b591065c 354 SMART SM00930 265 340 1.5E-28 T 12-10-2018 IPR018449 NIL domain Amet_3894 44f06595aa4799a912a9b9a0b591065c 354 Pfam PF09383 NIL domain 269 339 5.8E-22 T 12-10-2018 IPR018449 NIL domain Amet_3894 44f06595aa4799a912a9b9a0b591065c 354 SUPERFAMILY SSF55021 255 342 2.86E-22 T 12-10-2018 Amet_3894 44f06595aa4799a912a9b9a0b591065c 354 Gene3D G3DSA:3.30.70.260 257 346 6.7E-20 T 12-10-2018 Amet_3894 44f06595aa4799a912a9b9a0b591065c 354 SUPERFAMILY SSF52540 1 240 3.96E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1899 a7199d14c980cec6e6df139df627be35 396 Gene3D G3DSA:3.40.50.300 34 211 6.1E-22 T 12-10-2018 Amet_1899 a7199d14c980cec6e6df139df627be35 396 Pfam PF07728 AAA domain (dynein-related subfamily) 55 194 2.6E-13 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Amet_1899 a7199d14c980cec6e6df139df627be35 396 SUPERFAMILY SSF52540 20 270 1.83E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1243 c924f717c4d8f5eac20c01b97e38c4b6 242 PRINTS PR01837 MgtC/SapB protein signature 33 51 1.0E-46 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_1243 c924f717c4d8f5eac20c01b97e38c4b6 242 PRINTS PR01837 MgtC/SapB protein signature 93 117 1.0E-46 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_1243 c924f717c4d8f5eac20c01b97e38c4b6 242 PRINTS PR01837 MgtC/SapB protein signature 14 33 1.0E-46 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_1243 c924f717c4d8f5eac20c01b97e38c4b6 242 PRINTS PR01837 MgtC/SapB protein signature 66 88 1.0E-46 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_1243 c924f717c4d8f5eac20c01b97e38c4b6 242 SUPERFAMILY SSF55021 149 226 2.06E-6 T 12-10-2018 Amet_1243 c924f717c4d8f5eac20c01b97e38c4b6 242 Gene3D G3DSA:3.30.70.260 147 228 2.0E-5 T 12-10-2018 Amet_1243 c924f717c4d8f5eac20c01b97e38c4b6 242 Pfam PF02308 MgtC family 11 139 9.0E-40 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_2636 787b251c1df322e3cbecb9fb0e512124 254 Gene3D G3DSA:3.40.1210.10 1 253 2.8E-91 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Amet_2636 787b251c1df322e3cbecb9fb0e512124 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 254 36.901 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Amet_2636 787b251c1df322e3cbecb9fb0e512124 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 239 1.3E-68 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Amet_2636 787b251c1df322e3cbecb9fb0e512124 254 Pfam PF01975 Survival protein SurE 3 189 8.6E-62 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Amet_2636 787b251c1df322e3cbecb9fb0e512124 254 SUPERFAMILY SSF64167 1 252 4.32E-79 T 12-10-2018 Amet_3761 9c1c5a566c2458bbc902dd8a47bcfef1 419 Pfam PF05975 Bacterial ABC transporter protein EcsB 6 403 3.1E-86 T 12-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 Amet_3127 609ff0f0bd14bfba123caf127f3e620f 201 Gene3D G3DSA:1.10.10.10 128 191 2.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3127 609ff0f0bd14bfba123caf127f3e620f 201 Pfam PF04542 Sigma-70 region 2 26 93 8.8E-23 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_3127 609ff0f0bd14bfba123caf127f3e620f 201 Pfam PF08281 Sigma-70, region 4 132 184 1.3E-17 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_3127 609ff0f0bd14bfba123caf127f3e620f 201 Gene3D G3DSA:1.10.1740.10 2 120 8.7E-34 T 12-10-2018 Amet_3127 609ff0f0bd14bfba123caf127f3e620f 201 SUPERFAMILY SSF88659 107 190 1.42E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_3127 609ff0f0bd14bfba123caf127f3e620f 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 186 3.4E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_3127 609ff0f0bd14bfba123caf127f3e620f 201 SUPERFAMILY SSF88946 6 104 1.0E-31 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_3313 b8302f68eaad2c7e818400a753ace7ad 438 Pfam PF03553 Na+/H+ antiporter family 144 432 8.0E-67 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Amet_3313 b8302f68eaad2c7e818400a753ace7ad 438 Pfam PF13726 Na+-H+ antiporter family 4 90 2.3E-25 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal Amet_0761 8cafcf6b4b65383a68e2d82bc034de22 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 277 1.5E-90 T 12-10-2018 IPR003797 DegV Amet_0761 8cafcf6b4b65383a68e2d82bc034de22 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 279 4.8E-87 T 12-10-2018 IPR003797 DegV Amet_0761 8cafcf6b4b65383a68e2d82bc034de22 280 SUPERFAMILY SSF82549 2 279 4.45E-80 T 12-10-2018 Amet_0761 8cafcf6b4b65383a68e2d82bc034de22 280 Gene3D G3DSA:3.30.1180.10 154 280 6.2E-35 T 12-10-2018 Amet_0761 8cafcf6b4b65383a68e2d82bc034de22 280 Gene3D G3DSA:3.40.50.10170 1 152 7.3E-52 T 12-10-2018 Amet_1026 b449613709ac3f1e96f3ef778503e280 139 Gene3D G3DSA:3.10.580.10 1 139 1.7E-42 T 12-10-2018 Amet_1026 b449613709ac3f1e96f3ef778503e280 139 SMART SM00116 83 129 5.0 T 12-10-2018 IPR000644 CBS domain Amet_1026 b449613709ac3f1e96f3ef778503e280 139 SMART SM00116 12 60 0.0045 T 12-10-2018 IPR000644 CBS domain Amet_1026 b449613709ac3f1e96f3ef778503e280 139 Pfam PF00571 CBS domain 13 59 4.8E-8 T 12-10-2018 IPR000644 CBS domain Amet_1026 b449613709ac3f1e96f3ef778503e280 139 Pfam PF00571 CBS domain 86 127 1.8E-7 T 12-10-2018 IPR000644 CBS domain Amet_1026 b449613709ac3f1e96f3ef778503e280 139 SUPERFAMILY SSF54631 1 131 3.79E-30 T 12-10-2018 Amet_2646 0a95bfd92b7594a005f1d6b4f37216dd 211 Pfam PF11167 Protein of unknown function (DUF2953) 127 179 3.0E-16 T 12-10-2018 IPR021338 Protein of unknown function DUF2953 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 Gene3D G3DSA:3.30.450.20 7 148 9.6E-9 T 12-10-2018 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 287 3.7E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 SUPERFAMILY SSF47384 207 291 6.28E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 SUPERFAMILY SSF158472 171 219 8.5E-10 T 12-10-2018 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 SMART SM00387 335 447 2.4E-41 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 SUPERFAMILY SSF103190 32 145 2.2E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 SMART SM00388 223 290 1.8E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 2.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 2.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 2.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 2.2E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 445 2.2E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 SMART SM00304 170 222 2.1E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 SUPERFAMILY SSF55874 280 445 8.91E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 Pfam PF00672 HAMP domain 172 218 1.6E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 Gene3D G3DSA:3.30.565.10 297 448 1.3E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2326 8080b2c972752f65be9b100c3ab23f71 451 Gene3D G3DSA:1.10.287.130 168 283 2.3E-29 T 12-10-2018 Amet_0002 d114749a311a026548999ebec3111377 368 Gene3D G3DSA:3.10.150.10 1 241 2.1E-126 T 12-10-2018 Amet_0002 d114749a311a026548999ebec3111377 368 SMART SM00480 17 361 4.9E-124 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Amet_0002 d114749a311a026548999ebec3111377 368 SUPERFAMILY SSF55979 244 365 2.66E-35 T 12-10-2018 Amet_0002 d114749a311a026548999ebec3111377 368 Gene3D G3DSA:3.70.10.10 137 363 2.1E-126 T 12-10-2018 Amet_0002 d114749a311a026548999ebec3111377 368 SUPERFAMILY SSF55979 128 243 1.95E-26 T 12-10-2018 Amet_0002 d114749a311a026548999ebec3111377 368 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.0E-29 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Amet_0002 d114749a311a026548999ebec3111377 368 SUPERFAMILY SSF55979 1 116 8.44E-26 T 12-10-2018 Amet_0002 d114749a311a026548999ebec3111377 368 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 365 9.8E-102 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Amet_0002 d114749a311a026548999ebec3111377 368 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 244 364 2.9E-31 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Amet_0002 d114749a311a026548999ebec3111377 368 PIRSF PIRSF000804 1 366 9.8E-120 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Amet_0002 d114749a311a026548999ebec3111377 368 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 240 2.5E-30 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Amet_3908 679cd0300140b8609dd22f4d4830a98f 92 Pfam PF00005 ABC transporter 20 72 3.6E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3908 679cd0300140b8609dd22f4d4830a98f 92 Gene3D G3DSA:3.40.50.300 2 87 1.1E-19 T 12-10-2018 Amet_3908 679cd0300140b8609dd22f4d4830a98f 92 SUPERFAMILY SSF52540 3 74 5.32E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4656 906f1c2973fc29ad5bc92a4e781294c8 406 Pfam PF01734 Patatin-like phospholipase 4 190 3.8E-21 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Amet_4656 906f1c2973fc29ad5bc92a4e781294c8 406 Gene3D G3DSA:3.40.1090.10 1 128 2.8E-19 T 12-10-2018 Amet_4656 906f1c2973fc29ad5bc92a4e781294c8 406 SUPERFAMILY SSF52151 2 345 7.06E-40 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Amet_3980 ab3a5603c7becd24cba4021ea632c057 437 Gene3D G3DSA:2.70.70.10 278 432 2.1E-37 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_3980 ab3a5603c7becd24cba4021ea632c057 437 Pfam PF01551 Peptidase family M23 327 425 3.0E-27 T 12-10-2018 IPR016047 Peptidase M23 Amet_3980 ab3a5603c7becd24cba4021ea632c057 437 SUPERFAMILY SSF51261 305 429 6.8E-43 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 Gene3D G3DSA:3.40.50.620 1 210 6.3E-69 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 SUPERFAMILY SSF56037 377 457 3.53E-26 T 12-10-2018 Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 Pfam PF11734 TilS substrate C-terminal domain 388 453 4.8E-20 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 204 3.7E-57 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 SMART SM00977 386 458 6.1E-33 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 Pfam PF01171 PP-loop family 20 199 1.1E-51 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 315 25.029 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 386 432 3.3E-19 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 SUPERFAMILY SSF82829 212 321 1.18E-20 T 12-10-2018 Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 SUPERFAMILY SSF52402 7 233 5.29E-58 T 12-10-2018 Amet_4544 cf648d857f3de5fdc55b9794abc005a7 467 Gene3D G3DSA:1.20.59.30 244 326 2.4E-12 T 12-10-2018 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 460 31.586 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 SUPERFAMILY SSF53244 322 459 3.3E-34 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 Pfam PF08245 Mur ligase middle domain 113 300 2.0E-47 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 Gene3D G3DSA:3.40.1390.10 1 80 1.9E-18 T 12-10-2018 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 400 1.3E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 458 4.5E-120 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 SUPERFAMILY SSF53623 107 317 1.05E-51 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 SUPERFAMILY SSF63418 2 105 4.19E-19 T 12-10-2018 IPR035911 MurE/MurF, N-terminal Amet_2883 255cc676122e1b83c153cd591644d7bf 463 Pfam PF01225 Mur ligase family, catalytic domain 26 102 9.2E-7 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 Gene3D G3DSA:3.90.190.20 320 463 2.8E-41 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_2883 255cc676122e1b83c153cd591644d7bf 463 Gene3D G3DSA:3.40.1190.10 89 319 5.1E-67 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_2176 64582eb27f0689058e93f77f0cb05a03 576 Gene3D G3DSA:1.20.1560.10 1 314 2.0E-94 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_2176 64582eb27f0689058e93f77f0cb05a03 576 Pfam PF00005 ABC transporter 349 496 3.6E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2176 64582eb27f0689058e93f77f0cb05a03 576 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2176 64582eb27f0689058e93f77f0cb05a03 576 Pfam PF00664 ABC transporter transmembrane region 20 286 1.8E-50 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Amet_2176 64582eb27f0689058e93f77f0cb05a03 576 SUPERFAMILY SSF52540 326 568 4.55E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2176 64582eb27f0689058e93f77f0cb05a03 576 Gene3D G3DSA:3.40.50.300 322 576 6.2E-84 T 12-10-2018 Amet_2176 64582eb27f0689058e93f77f0cb05a03 576 SMART SM00382 358 559 4.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2176 64582eb27f0689058e93f77f0cb05a03 576 SUPERFAMILY SSF90123 3 318 3.66E-80 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Amet_0028 75c69a897139f7779ee77f48387c96a5 88 Pfam PF11823 Protein of unknown function (DUF3343) 7 73 2.6E-25 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 Amet_2155 a7dc85e2a1d20f3a5e9d382eea653525 411 Pfam PF00924 Mechanosensitive ion channel 141 396 1.6E-46 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Amet_2155 a7dc85e2a1d20f3a5e9d382eea653525 411 SUPERFAMILY SSF50182 185 250 6.21E-12 T 12-10-2018 IPR010920 LSM domain superfamily Amet_0293 c2d0a26c7dc97081129e2c35e6af4ceb 625 Gene3D G3DSA:2.60.40.10 196 290 2.5E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_0293 c2d0a26c7dc97081129e2c35e6af4ceb 625 SUPERFAMILY SSF49265 241 290 2.52E-5 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Amet_0293 c2d0a26c7dc97081129e2c35e6af4ceb 625 Pfam PF00395 S-layer homology domain 517 554 7.6E-12 T 12-10-2018 IPR001119 S-layer homology domain Amet_0293 c2d0a26c7dc97081129e2c35e6af4ceb 625 Pfam PF00395 S-layer homology domain 574 617 4.3E-15 T 12-10-2018 IPR001119 S-layer homology domain Amet_0293 c2d0a26c7dc97081129e2c35e6af4ceb 625 Pfam PF00395 S-layer homology domain 457 498 3.9E-16 T 12-10-2018 IPR001119 S-layer homology domain Amet_0293 c2d0a26c7dc97081129e2c35e6af4ceb 625 Gene3D G3DSA:2.60.220.30 317 459 2.5E-5 T 12-10-2018 Amet_3117 b853bc4155c1cd9a67c5f546fc9502a3 430 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 372 410 8.9E-7 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Amet_3117 b853bc4155c1cd9a67c5f546fc9502a3 430 Pfam PF12706 Beta-lactamase superfamily domain 68 202 1.2E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3117 b853bc4155c1cd9a67c5f546fc9502a3 430 SUPERFAMILY SSF56281 16 428 9.75E-43 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_3117 b853bc4155c1cd9a67c5f546fc9502a3 430 SMART SM00849 26 219 6.9E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3117 b853bc4155c1cd9a67c5f546fc9502a3 430 Gene3D G3DSA:3.60.15.10 352 430 3.3E-5 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_3117 b853bc4155c1cd9a67c5f546fc9502a3 430 Gene3D G3DSA:3.60.15.10 11 254 1.0E-52 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 6 355 7.1E-176 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 181 198 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 Gene3D G3DSA:3.30.420.40 6 357 1.7E-161 T 12-10-2018 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 PIRSF PIRSF036458 3 358 1.0E-174 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 Pfam PF00871 Acetokinase family 7 355 5.2E-79 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 SUPERFAMILY SSF53067 118 350 3.58E-58 T 12-10-2018 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 PRINTS PR00471 Acetate kinase family signature 181 202 1.3E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 PRINTS PR00471 Acetate kinase family signature 276 289 1.3E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 PRINTS PR00471 Acetate kinase family signature 299 315 1.3E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 PRINTS PR00471 Acetate kinase family signature 7 18 1.3E-17 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 Gene3D G3DSA:3.30.420.40 139 334 1.7E-161 T 12-10-2018 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 SUPERFAMILY SSF53067 5 174 1.11E-72 T 12-10-2018 Amet_4308 3eabd0c7755a235d87452a931ed1a96d 358 Hamap MF_00542 Probable butyrate kinase [buk]. 1 358 176.136 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Amet_3588 5b07c804c1210a5bc494eaf736fb3d1b 362 SUPERFAMILY SSF53822 61 301 4.0E-12 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_3588 5b07c804c1210a5bc494eaf736fb3d1b 362 Gene3D G3DSA:3.40.50.2300 151 350 7.1E-114 T 12-10-2018 Amet_3588 5b07c804c1210a5bc494eaf736fb3d1b 362 Gene3D G3DSA:3.40.50.2300 52 317 7.1E-114 T 12-10-2018 Amet_3588 5b07c804c1210a5bc494eaf736fb3d1b 362 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 53 354 1.0E-77 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Amet_0486 7ed636f8161790e04cd21d0c270862bb 340 SUPERFAMILY SSF58104 250 338 3.79E-5 T 12-10-2018 Amet_0486 7ed636f8161790e04cd21d0c270862bb 340 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 182 4.7E-5 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Amet_3626 27dbe22e699bb5fbffc517a99c79ad59 485 Gene3D G3DSA:2.20.230.10 380 451 2.5E-12 T 12-10-2018 Amet_3626 27dbe22e699bb5fbffc517a99c79ad59 485 SMART SM01208 375 452 1.1E-18 T 12-10-2018 IPR011098 G5 domain Amet_3626 27dbe22e699bb5fbffc517a99c79ad59 485 Pfam PF07501 G5 domain 385 451 2.8E-14 T 12-10-2018 IPR011098 G5 domain Amet_3626 27dbe22e699bb5fbffc517a99c79ad59 485 Pfam PF12229 Putative peptidoglycan binding domain 87 198 4.2E-21 T 12-10-2018 IPR022029 Putative peptidoglycan binding domain Amet_3626 27dbe22e699bb5fbffc517a99c79ad59 485 Pfam PF04294 VanW like protein 240 367 4.6E-52 T 12-10-2018 IPR007391 Vancomycin resistance VanW Amet_0250 82dcb51aac57c3be4342b4183de1a099 116 SUPERFAMILY SSF143414 43 106 2.09E-14 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_0250 82dcb51aac57c3be4342b4183de1a099 116 Pfam PF00936 BMC domain 45 102 3.4E-14 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0250 82dcb51aac57c3be4342b4183de1a099 116 Gene3D G3DSA:3.30.70.1710 1 116 6.8E-51 T 12-10-2018 Amet_0250 82dcb51aac57c3be4342b4183de1a099 116 SMART SM00877 44 116 7.2E-19 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0250 82dcb51aac57c3be4342b4183de1a099 116 PIRSF PIRSF012296 1 116 1.8E-55 T 12-10-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 Gene3D G3DSA:3.30.70.580 62 227 1.1E-53 T 12-10-2018 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 Gene3D G3DSA:3.30.70.1560 126 205 1.1E-53 T 12-10-2018 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 SMART SM00363 1 58 5.3E-14 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 Pfam PF01479 S4 domain 1 46 8.9E-14 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 SUPERFAMILY SSF55174 1 55 6.39E-15 T 12-10-2018 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 224 1.3E-45 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 Pfam PF00849 RNA pseudouridylate synthase 61 192 1.3E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 Gene3D G3DSA:3.10.290.10 1 55 8.5E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 SUPERFAMILY SSF55120 58 228 5.47E-40 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_4698 22d2d9a2781567ebf812ff718ef936b6 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 96 110 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Amet_2666 434eca3dc10eb68f4a8adbd54dcec769 244 Gene3D G3DSA:3.20.20.370 44 244 1.7E-53 T 12-10-2018 Amet_2666 434eca3dc10eb68f4a8adbd54dcec769 244 Pfam PF01522 Polysaccharide deacetylase 70 175 4.6E-30 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Amet_2666 434eca3dc10eb68f4a8adbd54dcec769 244 SUPERFAMILY SSF88713 44 242 8.68E-54 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Pfam PF00395 S-layer homology domain 1447 1490 1.9E-7 T 12-10-2018 IPR001119 S-layer homology domain Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Pfam PF00395 S-layer homology domain 1384 1423 3.4E-8 T 12-10-2018 IPR001119 S-layer homology domain Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Pfam PF13306 Leucine rich repeats (6 copies) 415 490 5.0E-15 T 12-10-2018 IPR026906 Leucine rich repeat 5 Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 939 980 2.1E-5 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 1011 1050 9.0E-7 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Pfam PF00139 Legume lectin domain 56 271 2.7E-29 T 12-10-2018 IPR001220 Legume lectin domain GO:0030246 Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Gene3D G3DSA:3.10.20.660 900 980 2.2E-6 T 12-10-2018 Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Gene3D G3DSA:3.10.20.660 581 651 2.2E-18 T 12-10-2018 Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Gene3D G3DSA:3.10.20.660 727 799 3.3E-14 T 12-10-2018 Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Gene3D G3DSA:3.10.20.660 981 1050 1.3E-19 T 12-10-2018 Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Gene3D G3DSA:3.10.20.660 520 580 8.2E-11 T 12-10-2018 Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 SUPERFAMILY SSF49899 43 268 7.46E-39 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 522 574 2.5E-10 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 982 1047 8.7E-19 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 730 796 1.9E-12 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 903 976 3.9E-9 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 583 648 1.6E-15 T 12-10-2018 IPR013378 Listeria/Bacterioides repeat Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Gene3D G3DSA:3.80.10.10 373 497 8.2E-24 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 Gene3D G3DSA:2.60.120.200 37 276 1.2E-42 T 12-10-2018 Amet_1773 b7434866c8fa40e007894de9a8b8cbc5 1505 ProSitePatterns PS00307 Legume lectins beta-chain signature. 152 158 - T 12-10-2018 IPR019825 Legume lectin, beta chain, Mn/Ca-binding site Reactome: R-HSA-196791|Reactome: R-HSA-8856825|Reactome: R-HSA-8856828|Reactome: R-HSA-975634 Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 SUPERFAMILY SSF47384 187 265 1.9E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 SMART SM00387 311 423 2.5E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 2.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 2.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 376 2.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 2.1E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 Gene3D G3DSA:3.30.565.10 272 422 1.2E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 SUPERFAMILY SSF55874 255 420 1.83E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 Pfam PF00512 His Kinase A (phospho-acceptor) domain 200 263 7.5E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 420 1.9E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 SMART SM00388 199 266 1.6E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1992 d126a7f62d9970f880622a62416d6fc0 424 Gene3D G3DSA:1.10.287.130 186 265 2.7E-19 T 12-10-2018 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 426 39.253 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 Gene3D G3DSA:3.20.20.10 34 292 4.2E-154 T 12-10-2018 IPR029066 PLP-binding barrel Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 292 383 4.9E-14 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 291 1.2E-57 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 SUPERFAMILY SSF50621 267 428 9.42E-53 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 Gene3D G3DSA:2.40.37.10 14 422 4.2E-154 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 282 301 1.1E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 194 207 1.1E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 59 77 1.1E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 383 396 1.1E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 79 91 1.1E-19 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 SUPERFAMILY SSF51419 26 294 2.78E-73 T 12-10-2018 IPR029066 PLP-binding barrel Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 PRINTS PR01181 Diaminopimelate decarboxylase signature 393 415 3.8E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 PRINTS PR01181 Diaminopimelate decarboxylase signature 166 175 3.8E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 PRINTS PR01181 Diaminopimelate decarboxylase signature 77 94 3.8E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 PRINTS PR01181 Diaminopimelate decarboxylase signature 311 329 3.8E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_4337 5dea5bcb71a7eb60b3d6224577cbbc7f 433 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 425 1.8E-143 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_0235 f4107f7306944eaff215267abb27de28 278 Pfam PF01061 ABC-2 type transporter 4 209 3.6E-33 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amet_0235 f4107f7306944eaff215267abb27de28 278 PIRSF PIRSF006648 1 262 5.1E-44 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_0235 f4107f7306944eaff215267abb27de28 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 130 154 9.4E-15 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_0235 f4107f7306944eaff215267abb27de28 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 48 70 9.4E-15 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_0235 f4107f7306944eaff215267abb27de28 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 167 186 9.4E-15 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_0235 f4107f7306944eaff215267abb27de28 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 187 206 9.4E-15 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_1439 7987d2db95ae71473bef8c2e837c222f 267 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 42 134 5.3E-8 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Amet_1439 7987d2db95ae71473bef8c2e837c222f 267 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 184 261 9.4E-9 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Amet_1439 7987d2db95ae71473bef8c2e837c222f 267 Gene3D G3DSA:3.30.559.10 28 140 1.7E-8 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amet_1439 7987d2db95ae71473bef8c2e837c222f 267 Gene3D G3DSA:3.30.559.10 180 264 1.7E-15 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Amet_1439 7987d2db95ae71473bef8c2e837c222f 267 SUPERFAMILY SSF52777 31 262 2.49E-25 T 12-10-2018 Amet_3552 89e6de75a5f8f377aa81e1b20269b09a 259 SUPERFAMILY SSF52540 11 231 9.96E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3552 89e6de75a5f8f377aa81e1b20269b09a 259 SMART SM00382 39 226 8.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3552 89e6de75a5f8f377aa81e1b20269b09a 259 Gene3D G3DSA:3.40.50.300 8 251 3.0E-64 T 12-10-2018 Amet_3552 89e6de75a5f8f377aa81e1b20269b09a 259 Pfam PF00005 ABC transporter 30 178 2.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 621 6.2E-271 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 Gene3D G3DSA:1.10.150.570 569 620 8.4E-23 T 12-10-2018 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 Pfam PF01134 Glucose inhibited division protein A 9 399 4.8E-165 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 Pfam PF13932 GidA associated domain 401 615 1.3E-77 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 41.999 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 Gene3D G3DSA:1.10.10.1800 459 549 3.4E-17 T 12-10-2018 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 SUPERFAMILY SSF51905 8 261 9.27E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 4.2E-7 T 12-10-2018 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 4.2E-7 T 12-10-2018 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 Gene3D G3DSA:3.50.50.60 1 233 3.6E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 Gene3D G3DSA:3.50.50.60 302 458 7.0E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 SMART SM01228 545 616 7.6E-41 T 12-10-2018 Amet_4796 ad67542ad2e8b6801578df882a7c856f 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Amet_0916 992471bfe3ede29379323fec5fa91357 391 Gene3D G3DSA:3.30.470.20 188 381 3.2E-75 T 12-10-2018 Amet_0916 992471bfe3ede29379323fec5fa91357 391 SUPERFAMILY SSF56059 107 307 1.03E-58 T 12-10-2018 Amet_0916 992471bfe3ede29379323fec5fa91357 391 SUPERFAMILY SSF51246 313 383 8.63E-15 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Amet_0916 992471bfe3ede29379323fec5fa91357 391 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 10 368 41.504 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Amet_0916 992471bfe3ede29379323fec5fa91357 391 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 373 1.9E-127 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Amet_0916 992471bfe3ede29379323fec5fa91357 391 SUPERFAMILY SSF52440 8 104 2.88E-28 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_0916 992471bfe3ede29379323fec5fa91357 391 Gene3D G3DSA:3.30.1490.20 112 187 6.5E-21 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_0916 992471bfe3ede29379323fec5fa91357 391 Gene3D G3DSA:3.40.50.20 9 111 1.0E-38 T 12-10-2018 Amet_0916 992471bfe3ede29379323fec5fa91357 391 Pfam PF02222 ATP-grasp domain 117 287 1.2E-53 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Amet_0952 7f31a29b4452179bdae31f556968bb69 327 SUPERFAMILY SSF55326 5 139 1.92E-22 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_0952 7f31a29b4452179bdae31f556968bb69 327 SUPERFAMILY SSF56042 147 306 4.93E-32 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_0952 7f31a29b4452179bdae31f556968bb69 327 Gene3D G3DSA:3.30.1330.10 2 139 1.1E-29 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Amet_0952 7f31a29b4452179bdae31f556968bb69 327 Pfam PF00586 AIR synthase related protein, N-terminal domain 34 138 8.1E-13 T 12-10-2018 IPR016188 PurM-like, N-terminal domain Amet_0952 7f31a29b4452179bdae31f556968bb69 327 Gene3D G3DSA:3.90.650.10 146 327 4.0E-44 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Amet_0952 7f31a29b4452179bdae31f556968bb69 327 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 304 1.8E-23 T 12-10-2018 IPR010918 PurM-like, C-terminal domain Amet_0952 7f31a29b4452179bdae31f556968bb69 327 PIRSF PIRSF005644 1 327 3.4E-73 T 12-10-2018 IPR011854 Carbamoyl dehydratase HypE Amet_4083 279e48512bcb877015fa0db1608a0018 203 SMART SM00793 17 199 3.3E-4 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_4083 279e48512bcb877015fa0db1608a0018 203 Pfam PF04647 Accessory gene regulator B 20 192 5.6E-32 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_3724 99248c86e2a60a0a9c1444d63d5f689d 81 Pfam PF07870 Protein of unknown function (DUF1657) 20 68 1.0E-13 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 Amet_0320 3eb8b69d071e5c1c1a2ba18a6ad55b1e 272 Gene3D G3DSA:3.40.50.1820 2 265 1.5E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_0320 3eb8b69d071e5c1c1a2ba18a6ad55b1e 272 Pfam PF00561 alpha/beta hydrolase fold 22 124 3.0E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_0320 3eb8b69d071e5c1c1a2ba18a6ad55b1e 272 Pfam PF00561 alpha/beta hydrolase fold 179 252 5.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_0320 3eb8b69d071e5c1c1a2ba18a6ad55b1e 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 8.0E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_0320 3eb8b69d071e5c1c1a2ba18a6ad55b1e 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 8.0E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_0320 3eb8b69d071e5c1c1a2ba18a6ad55b1e 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 8.0E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_0320 3eb8b69d071e5c1c1a2ba18a6ad55b1e 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 8.0E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_0320 3eb8b69d071e5c1c1a2ba18a6ad55b1e 272 SUPERFAMILY SSF53474 1 264 4.15E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_0997 3ffda3ab99b564bbf41273e7dcce6788 163 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 4 157 2.6E-43 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Amet_0997 3ffda3ab99b564bbf41273e7dcce6788 163 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 134 6.9E-46 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Amet_0997 3ffda3ab99b564bbf41273e7dcce6788 163 Gene3D G3DSA:3.40.50.300 1 161 1.0E-52 T 12-10-2018 Amet_0997 3ffda3ab99b564bbf41273e7dcce6788 163 SUPERFAMILY SSF52540 2 131 2.77E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1251 07f90b9126be9d6597521b56d34a6355 362 Pfam PF00676 Dehydrogenase E1 component 42 325 1.0E-94 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Amet_1251 07f90b9126be9d6597521b56d34a6355 362 Gene3D G3DSA:3.40.50.970 7 357 2.5E-124 T 12-10-2018 Amet_1251 07f90b9126be9d6597521b56d34a6355 362 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 13 351 6.9E-148 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Amet_1251 07f90b9126be9d6597521b56d34a6355 362 SUPERFAMILY SSF52518 9 357 3.04E-108 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_3490 5f285ca6c5816f1c3c6ad535018f472f 390 SUPERFAMILY SSF53383 5 389 1.48E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3490 5f285ca6c5816f1c3c6ad535018f472f 390 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amet_3490 5f285ca6c5816f1c3c6ad535018f472f 390 Pfam PF00155 Aminotransferase class I and II 34 383 1.2E-66 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_3490 5f285ca6c5816f1c3c6ad535018f472f 390 Gene3D G3DSA:3.90.1150.10 28 384 7.0E-127 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3490 5f285ca6c5816f1c3c6ad535018f472f 390 Gene3D G3DSA:3.40.640.10 53 290 7.0E-127 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_4064 0fc29bd389738c51f051d930c6d8294b 151 Pfam PF03061 Thioesterase superfamily 27 110 4.2E-14 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Amet_4064 0fc29bd389738c51f051d930c6d8294b 151 Gene3D G3DSA:3.10.129.10 11 143 1.5E-36 T 12-10-2018 Amet_4064 0fc29bd389738c51f051d930c6d8294b 151 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 20 132 1.5E-27 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Amet_4064 0fc29bd389738c51f051d930c6d8294b 151 SUPERFAMILY SSF54637 12 140 1.54E-37 T 12-10-2018 IPR029069 HotDog domain superfamily Amet_2303 194d53b734fdcab0c1202cf83abc2e8f 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 28.17 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2303 194d53b734fdcab0c1202cf83abc2e8f 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2303 194d53b734fdcab0c1202cf83abc2e8f 103 SUPERFAMILY SSF141091 1 102 1.96E-40 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2303 194d53b734fdcab0c1202cf83abc2e8f 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 5.9E-44 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2303 194d53b734fdcab0c1202cf83abc2e8f 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 8.8E-41 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_1113 6c5299f0f16ea26e4c1c5f54ec019521 53 Pfam PF07561 Domain of Unknown Function (DUF1540) 7 49 6.8E-12 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 Amet_2444 84a852d7fbd00703d2c77fc85c85ebf1 57 SUPERFAMILY SSF140500 9 53 5.62E-7 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 Amet_2444 84a852d7fbd00703d2c77fc85c85ebf1 57 Pfam PF09388 Spo0E like sporulation regulatory protein 11 53 1.6E-9 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 Amet_1623 707a55f8c44e33778fb277829163e9fd 334 Pfam PF02517 CAAX protease self-immunity 120 204 1.2E-17 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 SUPERFAMILY SSF88659 148 242 1.83E-21 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 PIRSF PIRSF000770 9 244 4.2E-70 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 13 244 1.5E-125 T 12-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 SUPERFAMILY SSF88946 30 136 1.07E-33 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 91 104 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 Pfam PF04542 Sigma-70 region 2 67 136 5.5E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 PRINTS PR00046 Major sigma-70 factor signature 225 236 4.1E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 PRINTS PR00046 Major sigma-70 factor signature 91 104 4.1E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 PRINTS PR00046 Major sigma-70 factor signature 210 225 4.1E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 PRINTS PR00046 Major sigma-70 factor signature 189 201 4.1E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 Gene3D G3DSA:1.20.120.1810 19 136 1.1E-23 T 12-10-2018 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 67 239 2.5E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 Pfam PF04545 Sigma-70, region 4 185 238 5.6E-14 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amet_2871 d735950119b63d975c78fe3f9f3a7f6b 244 Gene3D G3DSA:1.10.10.10 170 243 5.6E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2969 79e34b9f51a502f18412bd386af8eddd 401 Pfam PF00563 EAL domain 80 189 2.9E-12 T 12-10-2018 IPR001633 EAL domain Amet_2969 79e34b9f51a502f18412bd386af8eddd 401 PIRSF PIRSF003180 1 400 4.0E-119 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Amet_2969 79e34b9f51a502f18412bd386af8eddd 401 Gene3D G3DSA:1.10.3210.10 194 352 6.5E-20 T 12-10-2018 Amet_2969 79e34b9f51a502f18412bd386af8eddd 401 SUPERFAMILY SSF109604 180 396 2.92E-36 T 12-10-2018 Amet_2969 79e34b9f51a502f18412bd386af8eddd 401 SMART SM00052 2 194 6.2E-4 T 12-10-2018 IPR001633 EAL domain Amet_2969 79e34b9f51a502f18412bd386af8eddd 401 SUPERFAMILY SSF141868 3 193 3.14E-29 T 12-10-2018 IPR035919 EAL domain superfamily Amet_2969 79e34b9f51a502f18412bd386af8eddd 401 Gene3D G3DSA:3.20.20.450 2 193 1.9E-17 T 12-10-2018 IPR035919 EAL domain superfamily Amet_2969 79e34b9f51a502f18412bd386af8eddd 401 Pfam PF08668 HDOD domain 201 329 3.5E-14 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD Amet_0192 323f1572dee1b65c6a4d6aeddba16296 398 Pfam PF02706 Chain length determinant protein 2 101 4.8E-9 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Amet_0192 323f1572dee1b65c6a4d6aeddba16296 398 Pfam PF13807 G-rich domain on putative tyrosine kinase 311 381 4.7E-9 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain Amet_1132 6b61b42573fc6ab9a20a7497953c1170 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 307 1.8E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1132 6b61b42573fc6ab9a20a7497953c1170 311 SUPERFAMILY SSF161098 96 291 5.36E-20 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1132 6b61b42573fc6ab9a20a7497953c1170 311 Gene3D G3DSA:1.10.3720.10 92 304 9.9E-26 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3295 10eedb92c4a66cf94c4793bd906c99e1 417 Gene3D G3DSA:3.40.190.10 77 374 2.0E-25 T 12-10-2018 Amet_3295 10eedb92c4a66cf94c4793bd906c99e1 417 PIRSF PIRSF029172 8 417 2.6E-149 T 12-10-2018 IPR027020 Protein ynjB Amet_3295 10eedb92c4a66cf94c4793bd906c99e1 417 Gene3D G3DSA:3.40.190.10 175 319 2.0E-25 T 12-10-2018 Amet_3295 10eedb92c4a66cf94c4793bd906c99e1 417 Pfam PF13416 Bacterial extracellular solute-binding protein 80 371 2.9E-34 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amet_3295 10eedb92c4a66cf94c4793bd906c99e1 417 SUPERFAMILY SSF53850 56 363 1.47E-37 T 12-10-2018 Amet_3375 eebf75c4053e98a333a6bba2b844b663 294 Pfam PF02219 Methylenetetrahydrofolate reductase 2 282 1.8E-80 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_3375 eebf75c4053e98a333a6bba2b844b663 294 SUPERFAMILY SSF51730 1 283 8.24E-87 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like Amet_3375 eebf75c4053e98a333a6bba2b844b663 294 Gene3D G3DSA:3.20.20.220 2 292 2.4E-94 T 12-10-2018 Amet_3411 cfe01267450e2adcbdf571725fc730f8 87 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 8 82 4.0E-37 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Amet_3411 cfe01267450e2adcbdf571725fc730f8 87 PIRSF PIRSF002736 1 87 8.1E-33 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Amet_3411 cfe01267450e2adcbdf571725fc730f8 87 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 86 3.2E-28 T 12-10-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 Amet_3411 cfe01267450e2adcbdf571725fc730f8 87 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 85 1.4E-30 T 12-10-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein Amet_2164 fdf54792424009b5097c72acf33774c5 258 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 10 254 4.2E-115 T 12-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Amet_2164 fdf54792424009b5097c72acf33774c5 258 Gene3D G3DSA:3.20.20.70 2 257 6.4E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2164 fdf54792424009b5097c72acf33774c5 258 Pfam PF00793 DAHP synthetase I family 17 253 1.2E-76 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Amet_2164 fdf54792424009b5097c72acf33774c5 258 SUPERFAMILY SSF51569 8 256 7.97E-97 T 12-10-2018 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 Pfam PF00710 Asparaginase, N-terminal 5 194 1.3E-54 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 Gene3D G3DSA:3.40.50.1170 1 210 6.5E-67 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 6.9E-18 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 6.9E-18 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 PRINTS PR00139 Asparaginase/glutaminase family signature 256 274 6.9E-18 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 SUPERFAMILY SSF53774 2 326 1.7E-101 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 PIRSF PIRSF001220 1 327 5.0E-92 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 SMART SM00870 5 321 1.0E-137 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 Gene3D G3DSA:3.40.50.40 211 325 2.8E-31 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Amet_2203 6b3236583b490638c302a6f780c6be9e 330 PIRSF PIRSF500176 2 327 3.9E-83 T 12-10-2018 Amet_1888 7ff4466020f740180edfb812aee9c97d 454 Pfam PF01609 Transposase DDE domain 115 363 2.7E-29 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_1888 7ff4466020f740180edfb812aee9c97d 454 Gene3D G3DSA:3.90.350.10 199 345 1.4E-5 T 12-10-2018 IPR014736 Transposase, Tn5-like, core Amet_1888 7ff4466020f740180edfb812aee9c97d 454 SUPERFAMILY SSF53098 54 370 1.29E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_3010 7ff4466020f740180edfb812aee9c97d 454 Pfam PF01609 Transposase DDE domain 115 363 2.7E-29 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_3010 7ff4466020f740180edfb812aee9c97d 454 Gene3D G3DSA:3.90.350.10 199 345 1.4E-5 T 12-10-2018 IPR014736 Transposase, Tn5-like, core Amet_3010 7ff4466020f740180edfb812aee9c97d 454 SUPERFAMILY SSF53098 54 370 1.29E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1372 7ff4466020f740180edfb812aee9c97d 454 Pfam PF01609 Transposase DDE domain 115 363 2.7E-29 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_1372 7ff4466020f740180edfb812aee9c97d 454 Gene3D G3DSA:3.90.350.10 199 345 1.4E-5 T 12-10-2018 IPR014736 Transposase, Tn5-like, core Amet_1372 7ff4466020f740180edfb812aee9c97d 454 SUPERFAMILY SSF53098 54 370 1.29E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_3919 7ff4466020f740180edfb812aee9c97d 454 Pfam PF01609 Transposase DDE domain 115 363 2.7E-29 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_3919 7ff4466020f740180edfb812aee9c97d 454 Gene3D G3DSA:3.90.350.10 199 345 1.4E-5 T 12-10-2018 IPR014736 Transposase, Tn5-like, core Amet_3919 7ff4466020f740180edfb812aee9c97d 454 SUPERFAMILY SSF53098 54 370 1.29E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2809 3aa843fcb430c98b03e283cf8a7b6446 287 Gene3D G3DSA:1.10.3720.10 92 283 1.3E-32 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2809 3aa843fcb430c98b03e283cf8a7b6446 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 273 2.5E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2809 3aa843fcb430c98b03e283cf8a7b6446 287 SUPERFAMILY SSF161098 93 277 2.22E-38 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3113 4e14f1a6f0c3c3f67d3fb333d7fd181f 332 Gene3D G3DSA:1.10.101.10 21 98 2.9E-7 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amet_3113 4e14f1a6f0c3c3f67d3fb333d7fd181f 332 SUPERFAMILY SSF141523 111 241 1.96E-33 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amet_3113 4e14f1a6f0c3c3f67d3fb333d7fd181f 332 Gene3D G3DSA:2.40.440.10 110 242 1.9E-37 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Amet_3113 4e14f1a6f0c3c3f67d3fb333d7fd181f 332 Pfam PF01471 Putative peptidoglycan binding domain 48 88 1.8E-5 T 12-10-2018 IPR002477 Peptidoglycan binding-like Amet_3113 4e14f1a6f0c3c3f67d3fb333d7fd181f 332 SUPERFAMILY SSF47090 49 93 3.3E-5 T 12-10-2018 IPR036365 PGBD-like superfamily Amet_3113 4e14f1a6f0c3c3f67d3fb333d7fd181f 332 Pfam PF03734 L,D-transpeptidase catalytic domain 116 241 9.6E-21 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 SUPERFAMILY SSF51261 330 478 8.37E-58 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 Gene3D G3DSA:3.10.350.10 221 268 1.3E-12 T 12-10-2018 IPR036779 LysM domain superfamily Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 SUPERFAMILY SSF54106 222 265 3.01E-8 T 12-10-2018 Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 Pfam PF07501 G5 domain 281 350 1.4E-16 T 12-10-2018 IPR011098 G5 domain Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 SMART SM01208 274 352 6.3E-20 T 12-10-2018 IPR011098 G5 domain Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 Pfam PF01551 Peptidase family M23 381 475 5.0E-37 T 12-10-2018 IPR016047 Peptidase M23 Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 Gene3D G3DSA:2.20.230.10 276 343 1.5E-11 T 12-10-2018 Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 SMART SM00257 222 266 2.5E-10 T 12-10-2018 IPR018392 LysM domain Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 Gene3D G3DSA:2.70.70.10 344 481 1.1E-49 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_4761 6e3cfcaf84e66c9b2b626207a047c0bf 481 Pfam PF01476 LysM domain 223 264 7.5E-10 T 12-10-2018 IPR018392 LysM domain Amet_4068 074115bd2583cc3344157532e148ea59 586 SUPERFAMILY SSF50800 71 166 2.97E-28 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Amet_4068 074115bd2583cc3344157532e148ea59 586 Gene3D G3DSA:3.20.20.60 2 334 2.2E-196 T 12-10-2018 Amet_4068 074115bd2583cc3344157532e148ea59 586 ProSitePatterns PS00110 Pyruvate kinase active site signature. 214 226 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 SUPERFAMILY SSF52009 465 583 4.32E-27 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Amet_4068 074115bd2583cc3344157532e148ea59 586 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 1.8E-187 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 Gene3D G3DSA:3.40.1380.20 335 468 2.2E-196 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 Gene3D G3DSA:3.50.30.10 474 586 5.5E-31 T 12-10-2018 Amet_4068 074115bd2583cc3344157532e148ea59 586 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 470 4.3E-36 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 PRINTS PR01050 Pyruvate kinase family signature 293 311 1.6E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 PRINTS PR01050 Pyruvate kinase family signature 216 242 1.6E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 PRINTS PR01050 Pyruvate kinase family signature 268 292 1.6E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 PRINTS PR01050 Pyruvate kinase family signature 243 267 1.6E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.6E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.6E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 PRINTS PR01050 Pyruvate kinase family signature 312 328 1.6E-80 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 7.2E-151 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 Pfam PF00391 PEP-utilising enzyme, mobile domain 505 576 8.8E-20 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Amet_4068 074115bd2583cc3344157532e148ea59 586 Gene3D G3DSA:2.40.33.10 70 167 2.2E-196 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_4068 074115bd2583cc3344157532e148ea59 586 SUPERFAMILY SSF51621 1 341 8.72E-103 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amet_4068 074115bd2583cc3344157532e148ea59 586 SUPERFAMILY SSF52935 322 473 1.01E-42 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Amet_1187 3ab44352a3de1a22df215d69b4fa0a51 603 Gene3D G3DSA:1.10.287.950 300 602 3.7E-50 T 12-10-2018 Amet_1187 3ab44352a3de1a22df215d69b4fa0a51 603 SUPERFAMILY SSF58104 304 601 8.24E-51 T 12-10-2018 Amet_1187 3ab44352a3de1a22df215d69b4fa0a51 603 SMART SM00283 327 588 1.5E-25 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_1187 3ab44352a3de1a22df215d69b4fa0a51 603 Pfam PF07700 Haem-NO-binding 2 158 9.3E-38 T 12-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 Amet_1187 3ab44352a3de1a22df215d69b4fa0a51 603 SUPERFAMILY SSF111126 1 168 2.88E-37 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Amet_1187 3ab44352a3de1a22df215d69b4fa0a51 603 Gene3D G3DSA:3.90.1520.10 1 186 6.5E-62 T 12-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 Amet_1187 3ab44352a3de1a22df215d69b4fa0a51 603 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 405 550 6.5E-31 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2639 6a6955ba44b377bb3835cb6ec0420ced 157 Gene3D G3DSA:3.40.630.30 4 124 1.8E-11 T 12-10-2018 Amet_2639 6a6955ba44b377bb3835cb6ec0420ced 157 Pfam PF13673 Acetyltransferase (GNAT) domain 17 116 5.7E-9 T 12-10-2018 IPR000182 GNAT domain Amet_2639 6a6955ba44b377bb3835cb6ec0420ced 157 SUPERFAMILY SSF55729 19 122 7.98E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_3229 a24bdab56208c7cdcd2049642ffa7b25 395 Gene3D G3DSA:3.40.50.10380 2 162 2.5E-67 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Amet_3229 a24bdab56208c7cdcd2049642ffa7b25 395 Pfam PF00390 Malic enzyme, N-terminal domain 30 153 1.4E-23 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amet_3229 a24bdab56208c7cdcd2049642ffa7b25 395 Gene3D G3DSA:3.40.50.720 163 395 1.4E-81 T 12-10-2018 Amet_3229 a24bdab56208c7cdcd2049642ffa7b25 395 SMART SM00919 165 388 4.7E-119 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amet_3229 a24bdab56208c7cdcd2049642ffa7b25 395 SUPERFAMILY SSF53223 13 163 5.68E-51 T 12-10-2018 Amet_3229 a24bdab56208c7cdcd2049642ffa7b25 395 SUPERFAMILY SSF51735 165 394 1.48E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3229 a24bdab56208c7cdcd2049642ffa7b25 395 Pfam PF03949 Malic enzyme, NAD binding domain 167 387 1.0E-26 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Amet_3229 a24bdab56208c7cdcd2049642ffa7b25 395 PIRSF PIRSF000106 40 395 2.7E-80 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Amet_3229 a24bdab56208c7cdcd2049642ffa7b25 395 SMART SM01274 20 153 1.2E-69 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Amet_3356 7e24a993e53f37d9d3b7c1123f0404b3 75 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 12 66 1.8E-18 T 12-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Amet_3356 7e24a993e53f37d9d3b7c1123f0404b3 75 SUPERFAMILY SSF54786 6 74 4.71E-17 T 12-10-2018 Amet_3356 7e24a993e53f37d9d3b7c1123f0404b3 75 Gene3D G3DSA:3.30.920.30 6 74 1.6E-19 T 12-10-2018 IPR038570 HicA superfamily Amet_0133 88223ff447d561813e880ec5e68bf58e 233 Pfam PF00005 ABC transporter 17 152 2.7E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0133 88223ff447d561813e880ec5e68bf58e 233 Gene3D G3DSA:3.40.50.300 1 232 8.8E-52 T 12-10-2018 Amet_0133 88223ff447d561813e880ec5e68bf58e 233 SMART SM00382 26 202 2.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0133 88223ff447d561813e880ec5e68bf58e 233 SUPERFAMILY SSF52540 2 217 3.52E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0133 88223ff447d561813e880ec5e68bf58e 233 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 458 9.2E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 3.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 3.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 3.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 3.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 SMART SM00388 235 303 1.3E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 Gene3D G3DSA:1.20.120.620 1 103 3.3E-18 T 12-10-2018 IPR038318 KdpD, transmembrane domain superfamily Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 300 5.8E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 SUPERFAMILY SSF55874 292 457 9.82E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 Pfam PF13493 Domain of unknown function (DUF4118) 3 108 6.0E-23 T 12-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 SMART SM00387 347 459 4.3E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 Gene3D G3DSA:1.10.287.130 219 305 2.8E-15 T 12-10-2018 Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 Gene3D G3DSA:3.30.565.10 306 459 6.6E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3308 28d60d06a518c84c456b5af1ff0e1e21 461 SUPERFAMILY SSF47384 227 304 4.71E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 354 434 4.3E-34 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Amet_2857 cc83ff3dff94354450159bcabcb19182 440 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 344 2.4E-26 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 134 8.3E-25 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 Gene3D G3DSA:3.40.50.300 172 350 1.3E-53 T 12-10-2018 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 Gene3D G3DSA:3.40.50.300 1 164 5.3E-46 T 12-10-2018 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 Gene3D G3DSA:3.30.300.20 354 437 3.9E-34 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Amet_2857 cc83ff3dff94354450159bcabcb19182 440 SUPERFAMILY SSF52540 6 169 2.19E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2857 cc83ff3dff94354450159bcabcb19182 440 SUPERFAMILY SSF52540 140 436 1.05E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2857 cc83ff3dff94354450159bcabcb19182 440 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 434 9.1E-177 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 Hamap MF_00195 GTPase Der [der]. 3 437 41.193 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 249 267 1.6E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 179 199 1.6E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 Pfam PF01926 50S ribosome-binding GTPase 6 121 1.6E-27 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 Pfam PF01926 50S ribosome-binding GTPase 178 296 2.6E-26 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2857 cc83ff3dff94354450159bcabcb19182 440 PIRSF PIRSF006485 2 440 2.6E-175 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 Pfam PF01261 Xylose isomerase-like TIM barrel 94 281 9.0E-7 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 5 435 7.8E-218 T 12-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 Hamap MF_00455 Xylose isomerase [xylA]. 11 435 53.536 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 PRINTS PR00688 Xylose isomerase signature 228 252 1.6E-94 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 PRINTS PR00688 Xylose isomerase signature 206 225 1.6E-94 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 PRINTS PR00688 Xylose isomerase signature 179 200 1.6E-94 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 PRINTS PR00688 Xylose isomerase signature 155 174 1.6E-94 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 PRINTS PR00688 Xylose isomerase signature 299 310 1.6E-94 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 PRINTS PR00688 Xylose isomerase signature 332 343 1.6E-94 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 PRINTS PR00688 Xylose isomerase signature 132 152 1.6E-94 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 PRINTS PR00688 Xylose isomerase signature 270 297 1.6E-94 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 PRINTS PR00688 Xylose isomerase signature 91 113 1.6E-94 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 Gene3D G3DSA:3.20.20.150 2 437 3.7E-182 T 12-10-2018 Amet_3796 5c8d97455893e96eef0b5d2f92682ff7 437 SUPERFAMILY SSF51658 4 436 2.33E-166 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Amet_0475 ecb85a691f5432113333e4436e873c6f 363 Pfam PF13378 Enolase C-terminal domain-like 151 354 1.3E-50 T 12-10-2018 IPR029065 Enolase C-terminal domain-like Amet_0475 ecb85a691f5432113333e4436e873c6f 363 SUPERFAMILY SSF54826 1 125 4.1E-33 T 12-10-2018 Amet_0475 ecb85a691f5432113333e4436e873c6f 363 SMART SM00922 141 239 8.6E-28 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Amet_0475 ecb85a691f5432113333e4436e873c6f 363 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 99 124 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Amet_0475 ecb85a691f5432113333e4436e873c6f 363 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 10 124 7.7E-22 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Amet_0475 ecb85a691f5432113333e4436e873c6f 363 Gene3D G3DSA:3.20.20.120 116 352 3.9E-121 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amet_0475 ecb85a691f5432113333e4436e873c6f 363 SUPERFAMILY SSF51604 112 354 4.45E-70 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amet_0475 ecb85a691f5432113333e4436e873c6f 363 Gene3D G3DSA:3.30.390.10 7 115 3.9E-121 T 12-10-2018 IPR029017 Enolase-like, N-terminal Amet_2518 7dc2abae80228d202f6e9c1e99aa9509 230 Gene3D G3DSA:3.90.550.10 2 230 5.6E-45 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_2518 7dc2abae80228d202f6e9c1e99aa9509 230 SUPERFAMILY SSF53448 4 225 1.78E-31 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_2518 7dc2abae80228d202f6e9c1e99aa9509 230 Pfam PF00535 Glycosyl transferase family 2 6 132 3.1E-25 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 SMART SM00382 634 909 0.0013 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 Pfam PF00005 ABC transporter 625 861 2.3E-8 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 Gene3D G3DSA:1.10.8.280 286 406 1.3E-256 T 12-10-2018 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 941 23.072 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 Gene3D G3DSA:3.40.50.300 616 937 1.5E-143 T 12-10-2018 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 ProSitePatterns PS00211 ABC transporters family signature. 831 845 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 Gene3D G3DSA:3.40.50.300 7 598 1.3E-256 T 12-10-2018 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 925 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 Gene3D G3DSA:1.20.1580.10 92 495 1.3E-256 T 12-10-2018 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 SUPERFAMILY SSF52540 10 572 1.37E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 SUPERFAMILY SSF52540 615 914 9.48E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 Gene3D G3DSA:1.20.1580.10 694 831 1.5E-143 T 12-10-2018 Amet_4126 6b9d415c4c1d3a68250078d4a4def583 945 Gene3D G3DSA:3.30.190.20 132 241 1.3E-256 T 12-10-2018 Amet_2727 57f01fff2146ce2e58240b96b57f0397 147 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 147 1.6E-51 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Amet_2727 57f01fff2146ce2e58240b96b57f0397 147 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 94 144 3.6E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Amet_2727 57f01fff2146ce2e58240b96b57f0397 147 Pfam PF00460 Flagella basal body rod protein 7 34 2.3E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Amet_2794 2cb3fac223eeca210d8e3c135b070077 592 Gene3D G3DSA:2.30.310.10 1 167 4.8E-63 T 12-10-2018 Amet_2794 2cb3fac223eeca210d8e3c135b070077 592 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 461 2.7E-156 T 12-10-2018 Amet_2794 2cb3fac223eeca210d8e3c135b070077 592 Pfam PF05670 Domain of unknown function (DUF814) 474 559 7.4E-27 T 12-10-2018 IPR008532 Domain of unknown function DUF814 Amet_1648 bfe38d182d682bb6e6ca590f152ad149 482 Gene3D G3DSA:2.40.37.10 317 477 1.3E-14 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amet_1648 bfe38d182d682bb6e6ca590f152ad149 482 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 259 1.9E-27 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Amet_1648 bfe38d182d682bb6e6ca590f152ad149 482 Gene3D G3DSA:3.20.20.10 39 273 3.4E-42 T 12-10-2018 IPR029066 PLP-binding barrel Amet_1648 bfe38d182d682bb6e6ca590f152ad149 482 SUPERFAMILY SSF51419 30 343 4.06E-39 T 12-10-2018 IPR029066 PLP-binding barrel Amet_1648 bfe38d182d682bb6e6ca590f152ad149 482 SUPERFAMILY SSF50621 328 458 1.15E-13 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 18 28 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 Gene3D G3DSA:3.40.50.1260 12 396 2.3E-163 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 7.5E-95 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PRINTS PR00477 Phosphoglycerate kinase family signature 143 165 7.5E-95 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 7.5E-95 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PRINTS PR00477 Phosphoglycerate kinase family signature 196 215 7.5E-95 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PRINTS PR00477 Phosphoglycerate kinase family signature 318 343 7.5E-95 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PRINTS PR00477 Phosphoglycerate kinase family signature 13 29 7.5E-95 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PRINTS PR00477 Phosphoglycerate kinase family signature 115 130 7.5E-95 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PRINTS PR00477 Phosphoglycerate kinase family signature 173 195 7.5E-95 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PRINTS PR00477 Phosphoglycerate kinase family signature 351 362 7.5E-95 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 SUPERFAMILY SSF53748 4 398 1.41E-156 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 Gene3D G3DSA:3.40.50.1260 175 388 2.3E-163 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 398 42.96 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 Pfam PF00162 Phosphoglycerate kinase 9 388 3.1E-165 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3579 3f9f490e048f68223b4c5efa79e6bf70 399 PIRSF PIRSF000724 1 399 1.8E-152 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_4652 34848152ee5e927307d533e16ee77f9a 211 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 43 199 1.8E-48 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 Amet_4652 34848152ee5e927307d533e16ee77f9a 211 Gene3D G3DSA:1.10.1760.20 37 201 2.4E-48 T 12-10-2018 Amet_4652 34848152ee5e927307d533e16ee77f9a 211 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 41 193 2.9E-37 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 Amet_0972 46bef1fc4f1783d3fb344aee1f04fc7b 263 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 11 235 9.3E-47 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Amet_0972 46bef1fc4f1783d3fb344aee1f04fc7b 263 PIRSF PIRSF000915 2 263 1.3E-68 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Amet_0972 46bef1fc4f1783d3fb344aee1f04fc7b 263 Pfam PF13242 HAD-hyrolase-like 185 258 3.8E-21 T 12-10-2018 Amet_0972 46bef1fc4f1783d3fb344aee1f04fc7b 263 Gene3D G3DSA:3.40.50.1000 75 187 4.4E-85 T 12-10-2018 IPR023214 HAD superfamily Amet_0972 46bef1fc4f1783d3fb344aee1f04fc7b 263 Gene3D G3DSA:3.40.50.1000 10 253 4.4E-85 T 12-10-2018 IPR023214 HAD superfamily Amet_0972 46bef1fc4f1783d3fb344aee1f04fc7b 263 SUPERFAMILY SSF56784 9 260 2.16E-66 T 12-10-2018 IPR036412 HAD-like superfamily Amet_0972 46bef1fc4f1783d3fb344aee1f04fc7b 263 Pfam PF13344 Haloacid dehalogenase-like hydrolase 11 109 2.6E-29 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Amet_4428 ec785baaf8adda320bdfeedd7d9d328f 250 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 58 205 2.5E-27 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_4428 ec785baaf8adda320bdfeedd7d9d328f 250 Gene3D G3DSA:3.40.50.970 71 249 7.8E-27 T 12-10-2018 Amet_4428 ec785baaf8adda320bdfeedd7d9d328f 250 SUPERFAMILY SSF52518 14 246 2.53E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_0947 9651019c24edaa1f2c84a2180a8565cb 587 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 19 163 1.6E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_0947 9651019c24edaa1f2c84a2180a8565cb 587 Pfam PF07664 Ferrous iron transport protein B C terminus 402 452 1.5E-9 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Amet_0947 9651019c24edaa1f2c84a2180a8565cb 587 Pfam PF02421 Ferrous iron transport protein B 19 171 3.8E-47 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Amet_0947 9651019c24edaa1f2c84a2180a8565cb 587 SUPERFAMILY SSF52540 17 178 7.53E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0947 9651019c24edaa1f2c84a2180a8565cb 587 Gene3D G3DSA:3.40.50.300 18 208 1.8E-39 T 12-10-2018 Amet_0947 9651019c24edaa1f2c84a2180a8565cb 587 Pfam PF07670 Nucleoside recognition 463 554 1.3E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Amet_0947 9651019c24edaa1f2c84a2180a8565cb 587 Pfam PF07670 Nucleoside recognition 302 394 8.5E-11 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Amet_0947 9651019c24edaa1f2c84a2180a8565cb 587 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 41 59 9.1E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_0947 9651019c24edaa1f2c84a2180a8565cb 587 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 20 40 9.1E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_4237 900213034018e2d9c9c8711984b417df 64 Gene3D G3DSA:3.10.20.30 1 64 8.9E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_4237 900213034018e2d9c9c8711984b417df 64 Pfam PF02597 ThiS family 6 64 5.9E-11 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Amet_4237 900213034018e2d9c9c8711984b417df 64 SUPERFAMILY SSF54285 1 63 5.23E-18 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Amet_4237 900213034018e2d9c9c8711984b417df 64 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 1 64 3.2E-22 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis Amet_0918 e003e4dbb8a01c3a215678088684cee9 236 ProSitePatterns PS01057 SAICAR synthetase signature 1. 89 103 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0918 e003e4dbb8a01c3a215678088684cee9 236 SUPERFAMILY SSF56104 4 235 9.48E-84 T 12-10-2018 Amet_0918 e003e4dbb8a01c3a215678088684cee9 236 Gene3D G3DSA:3.30.470.20 88 223 1.8E-96 T 12-10-2018 Amet_0918 e003e4dbb8a01c3a215678088684cee9 236 Gene3D G3DSA:3.30.200.20 10 234 1.8E-96 T 12-10-2018 Amet_0918 e003e4dbb8a01c3a215678088684cee9 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 7 236 31.285 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0918 e003e4dbb8a01c3a215678088684cee9 236 ProSitePatterns PS01058 SAICAR synthetase signature 2. 176 184 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0918 e003e4dbb8a01c3a215678088684cee9 236 Pfam PF01259 SAICAR synthetase 10 233 6.9E-69 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Amet_0918 e003e4dbb8a01c3a215678088684cee9 236 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 8 235 2.9E-74 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Amet_0366 ea69df64cda34d0bdf6315d83386eab0 235 Pfam PF00005 ABC transporter 25 173 2.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0366 ea69df64cda34d0bdf6315d83386eab0 235 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0366 ea69df64cda34d0bdf6315d83386eab0 235 Gene3D G3DSA:3.40.50.300 3 233 3.1E-67 T 12-10-2018 Amet_0366 ea69df64cda34d0bdf6315d83386eab0 235 SMART SM00382 34 222 1.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0366 ea69df64cda34d0bdf6315d83386eab0 235 SUPERFAMILY SSF52540 6 226 2.87E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4442 9e91896efb54e2127155102d05ff881b 130 SUPERFAMILY SSF54211 6 130 1.33E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_4442 9e91896efb54e2127155102d05ff881b 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.942 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Amet_4442 9e91896efb54e2127155102d05ff881b 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.8E-48 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Amet_4442 9e91896efb54e2127155102d05ff881b 130 Gene3D G3DSA:3.30.230.10 1 130 4.2E-54 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_4442 9e91896efb54e2127155102d05ff881b 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Amet_1010 c5c3a2098581b6f802f371fd2217ef6c 538 Gene3D G3DSA:3.30.750.24 427 519 1.4E-25 T 12-10-2018 IPR036513 STAS domain superfamily Amet_1010 c5c3a2098581b6f802f371fd2217ef6c 538 Pfam PF01740 STAS domain 437 519 3.4E-7 T 12-10-2018 IPR002645 STAS domain Amet_1010 c5c3a2098581b6f802f371fd2217ef6c 538 SUPERFAMILY SSF52091 436 528 2.94E-10 T 12-10-2018 IPR036513 STAS domain superfamily Amet_1010 c5c3a2098581b6f802f371fd2217ef6c 538 Pfam PF00916 Sulfate permease family 32 395 2.2E-54 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Amet_3955 bdb7145f5621c5270405322be519c0f2 345 SMART SM00388 121 178 0.0036 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3955 bdb7145f5621c5270405322be519c0f2 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 261 275 7.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3955 bdb7145f5621c5270405322be519c0f2 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 332 7.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3955 bdb7145f5621c5270405322be519c0f2 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 289 7.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3955 bdb7145f5621c5270405322be519c0f2 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 313 7.8E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3955 bdb7145f5621c5270405322be519c0f2 345 SUPERFAMILY SSF55874 181 331 1.96E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3955 bdb7145f5621c5270405322be519c0f2 345 Gene3D G3DSA:1.10.287.130 126 175 6.1E-33 T 12-10-2018 Amet_3955 bdb7145f5621c5270405322be519c0f2 345 Gene3D G3DSA:3.30.565.10 176 329 6.1E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3955 bdb7145f5621c5270405322be519c0f2 345 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 231 330 6.4E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3955 bdb7145f5621c5270405322be519c0f2 345 SMART SM00387 223 335 8.7E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3955 bdb7145f5621c5270405322be519c0f2 345 SUPERFAMILY SSF47384 118 176 1.08E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_4115 ff10553531201212dfcc137ec1ad3c20 235 PIRSF PIRSF039137 1 235 2.9E-113 T 12-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Amet_4115 ff10553531201212dfcc137ec1ad3c20 235 Gene3D G3DSA:3.40.50.300 1 235 1.5E-63 T 12-10-2018 Amet_4115 ff10553531201212dfcc137ec1ad3c20 235 SUPERFAMILY SSF52540 2 232 3.29E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4115 ff10553531201212dfcc137ec1ad3c20 235 Pfam PF00005 ABC transporter 17 162 1.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4115 ff10553531201212dfcc137ec1ad3c20 235 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4115 ff10553531201212dfcc137ec1ad3c20 235 SMART SM00382 26 214 4.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2914 203920b69e2f18c5e8993e6ae7019c14 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 320 9.4E-40 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2914 203920b69e2f18c5e8993e6ae7019c14 321 SUPERFAMILY SSF161098 92 302 3.43E-16 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2914 203920b69e2f18c5e8993e6ae7019c14 321 Gene3D G3DSA:1.10.3720.10 86 312 2.3E-20 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0342 f879c1a733816552e8d7ebf1c2d453b5 471 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 312 332 1.5E-16 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0342 f879c1a733816552e8d7ebf1c2d453b5 471 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 1.5E-16 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0342 f879c1a733816552e8d7ebf1c2d453b5 471 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 1.5E-16 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0342 f879c1a733816552e8d7ebf1c2d453b5 471 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 1.5E-16 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0342 f879c1a733816552e8d7ebf1c2d453b5 471 Pfam PF00209 Sodium:neurotransmitter symporter family 8 124 7.9E-28 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0342 f879c1a733816552e8d7ebf1c2d453b5 471 Pfam PF00209 Sodium:neurotransmitter symporter family 148 451 1.4E-33 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0342 f879c1a733816552e8d7ebf1c2d453b5 471 SUPERFAMILY SSF161070 8 460 7.19E-134 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Amet_0342 f879c1a733816552e8d7ebf1c2d453b5 471 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 32 46 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0068 21c87d5878cfcadc55cffad750e6f751 291 PIRSF PIRSF033887 1 283 5.7E-80 T 12-10-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 Amet_0068 21c87d5878cfcadc55cffad750e6f751 291 Pfam PF00288 GHMP kinases N terminal domain 74 120 2.4E-8 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Amet_0068 21c87d5878cfcadc55cffad750e6f751 291 SUPERFAMILY SSF54211 1 137 3.19E-18 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_0068 21c87d5878cfcadc55cffad750e6f751 291 Gene3D G3DSA:3.30.230.10 1 153 9.8E-14 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_0794 fb30f3113d85a50e0135f617e2c8d0c5 96 Gene3D G3DSA:3.40.1690.10 7 88 3.2E-24 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Amet_0794 fb30f3113d85a50e0135f617e2c8d0c5 96 SUPERFAMILY SSF160544 8 86 3.4E-22 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Amet_0794 fb30f3113d85a50e0135f617e2c8d0c5 96 Pfam PF01312 FlhB HrpN YscU SpaS Family 10 82 5.2E-19 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Amet_0277 5e79640e4c882fed9f8bdf18adeddeb2 615 SUPERFAMILY SSF51735 286 549 7.02E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0277 5e79640e4c882fed9f8bdf18adeddeb2 615 Gene3D G3DSA:3.40.50.720 285 569 1.5E-125 T 12-10-2018 Amet_0277 5e79640e4c882fed9f8bdf18adeddeb2 615 Gene3D G3DSA:3.90.25.30 450 550 1.5E-125 T 12-10-2018 Amet_0277 5e79640e4c882fed9f8bdf18adeddeb2 615 Pfam PF02719 Polysaccharide biosynthesis protein 288 570 1.2E-127 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Amet_0277 5e79640e4c882fed9f8bdf18adeddeb2 615 SUPERFAMILY SSF51735 144 275 1.14E-17 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0277 5e79640e4c882fed9f8bdf18adeddeb2 615 Gene3D G3DSA:3.40.50.720 143 269 1.9E-37 T 12-10-2018 Amet_0277 5e79640e4c882fed9f8bdf18adeddeb2 615 Pfam PF13727 CoA-binding domain 63 243 3.2E-17 T 12-10-2018 Amet_2200 4c565f82a5aef0b8f8ae1d5e930120b1 342 Pfam PF13482 RNase_H superfamily 29 194 1.5E-36 T 12-10-2018 IPR038720 YprB, ribonuclease H-like domain Amet_2200 4c565f82a5aef0b8f8ae1d5e930120b1 342 SUPERFAMILY SSF53098 28 215 5.18E-33 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2200 4c565f82a5aef0b8f8ae1d5e930120b1 342 Gene3D G3DSA:3.30.420.10 26 192 9.0E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.8E-6 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.8E-6 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 Gene3D G3DSA:3.40.50.880 1 187 4.5E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 8.9E-70 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 SUPERFAMILY SSF52317 1 186 2.75E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.5E-34 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.5E-34 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.5E-34 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.5E-34 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.5E-34 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.5E-34 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 Pfam PF00117 Glutamine amidotransferase class-I 3 185 3.0E-52 T 12-10-2018 IPR017926 Glutamine amidotransferase Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 7.1E-14 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 7.1E-14 T 12-10-2018 Amet_1078 11ad4be5775dde85bac71eb4251e1ec6 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.1E-14 T 12-10-2018 Amet_0051 d8b8ff24433df0e07edf5e7eae20ffed 335 SUPERFAMILY SSF102114 3 303 3.79E-72 T 12-10-2018 Amet_0051 d8b8ff24433df0e07edf5e7eae20ffed 335 SMART SM00729 1 200 0.0052 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_0051 d8b8ff24433df0e07edf5e7eae20ffed 335 Pfam PF13186 Iron-sulfur cluster-binding domain 237 295 3.1E-10 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Amet_0051 d8b8ff24433df0e07edf5e7eae20ffed 335 PIRSF PIRSF037420 1 334 1.9E-92 T 12-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Amet_0051 d8b8ff24433df0e07edf5e7eae20ffed 335 Pfam PF04055 Radical SAM superfamily 6 160 4.3E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_0051 d8b8ff24433df0e07edf5e7eae20ffed 335 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 237 317 1.8E-11 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Amet_0051 d8b8ff24433df0e07edf5e7eae20ffed 335 TIGRFAM TIGR04055 rSAM_NirJ2: putative heme d1 biosynthesis radical SAM protein NirJ2 2 326 1.3E-189 T 12-10-2018 IPR027633 Putative heme D1 biosynthesis radical SAM protein NirJ2 Amet_0051 d8b8ff24433df0e07edf5e7eae20ffed 335 Pfam PF13353 4Fe-4S single cluster domain 9 84 4.8E-6 T 12-10-2018 Amet_0051 d8b8ff24433df0e07edf5e7eae20ffed 335 Gene3D G3DSA:3.20.20.70 2 285 1.6E-55 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3193 070aa674fed423990aa748f17bd34dd3 392 Gene3D G3DSA:3.90.1150.10 21 383 2.3E-122 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3193 070aa674fed423990aa748f17bd34dd3 392 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 217 254 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_3193 070aa674fed423990aa748f17bd34dd3 392 PIRSF PIRSF000521 6 392 1.4E-48 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_3193 070aa674fed423990aa748f17bd34dd3 392 SUPERFAMILY SSF53383 12 390 8.5E-107 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3193 070aa674fed423990aa748f17bd34dd3 392 Pfam PF00202 Aminotransferase class-III 18 389 1.3E-96 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_3193 070aa674fed423990aa748f17bd34dd3 392 Gene3D G3DSA:3.40.640.10 56 298 2.3E-122 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0752 233d8b213ea34b1ece4032a4614f64c3 209 Gene3D G3DSA:1.10.3210.10 6 203 2.3E-51 T 12-10-2018 Amet_0752 233d8b213ea34b1ece4032a4614f64c3 209 SUPERFAMILY SSF109604 24 190 4.91E-34 T 12-10-2018 Amet_0752 233d8b213ea34b1ece4032a4614f64c3 209 TIGRFAM TIGR00277 HDIG: HDIG domain 26 70 9.7E-8 T 12-10-2018 IPR006675 HDIG domain Amet_0752 233d8b213ea34b1ece4032a4614f64c3 209 Pfam PF01966 HD domain 27 154 2.5E-21 T 12-10-2018 IPR006674 HD domain Amet_0752 233d8b213ea34b1ece4032a4614f64c3 209 SMART SM00471 22 164 2.0E-13 T 12-10-2018 IPR003607 HD/PDEase domain Amet_3406 d6ff6c8bce37f070f1a6c46bdc011074 361 Gene3D G3DSA:3.90.550.10 2 216 6.1E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_3406 d6ff6c8bce37f070f1a6c46bdc011074 361 SUPERFAMILY SSF53448 3 148 8.84E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_3406 d6ff6c8bce37f070f1a6c46bdc011074 361 SUPERFAMILY SSF48452 263 352 5.69E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3406 d6ff6c8bce37f070f1a6c46bdc011074 361 Gene3D G3DSA:1.25.40.10 262 360 5.0E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3406 d6ff6c8bce37f070f1a6c46bdc011074 361 Pfam PF00535 Glycosyl transferase family 2 5 144 3.9E-21 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amet_3406 d6ff6c8bce37f070f1a6c46bdc011074 361 SUPERFAMILY SSF48452 186 293 4.78E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1171 9bed67189a78ef11c28dbf850a98af29 329 Gene3D G3DSA:3.30.420.40 100 240 1.7E-86 T 12-10-2018 Amet_1171 9bed67189a78ef11c28dbf850a98af29 329 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 6 256 2.1E-56 T 12-10-2018 IPR008275 CoA enzyme activase Amet_1171 9bed67189a78ef11c28dbf850a98af29 329 Gene3D G3DSA:3.30.420.40 6 257 1.7E-86 T 12-10-2018 Amet_1171 9bed67189a78ef11c28dbf850a98af29 329 SUPERFAMILY SSF53067 5 257 1.23E-43 T 12-10-2018 Amet_1171 9bed67189a78ef11c28dbf850a98af29 329 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 257 1.0E-45 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Amet_4105 1b363cc6e75b46a077aa5e45b718d481 457 TIGRFAM TIGR03955 rSAM_HydG: [FeFe] hydrogenase H-cluster radical SAM maturase HydG 5 455 1.8E-158 T 12-10-2018 IPR024007 [FeFe]-hydrogenase maturation HydG, radical SAM Amet_4105 1b363cc6e75b46a077aa5e45b718d481 457 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 263 365 3.9E-28 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_4105 1b363cc6e75b46a077aa5e45b718d481 457 SMART SM00876 263 368 3.1E-35 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Amet_4105 1b363cc6e75b46a077aa5e45b718d481 457 Pfam PF04055 Radical SAM superfamily 85 233 8.1E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_4105 1b363cc6e75b46a077aa5e45b718d481 457 SUPERFAMILY SSF102114 39 341 9.42E-50 T 12-10-2018 Amet_4105 1b363cc6e75b46a077aa5e45b718d481 457 Gene3D G3DSA:3.20.20.70 12 379 2.0E-119 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0138 79afd41423dcca4eabfadd4d724c8847 287 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 284 58.135 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Amet_0138 79afd41423dcca4eabfadd4d724c8847 287 Gene3D G3DSA:1.10.8.100 218 286 7.3E-21 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Amet_0138 79afd41423dcca4eabfadd4d724c8847 287 SMART SM00650 35 210 9.7E-79 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Amet_0138 79afd41423dcca4eabfadd4d724c8847 287 SUPERFAMILY SSF53335 16 283 1.08E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0138 79afd41423dcca4eabfadd4d724c8847 287 Gene3D G3DSA:3.40.50.150 1 214 1.5E-76 T 12-10-2018 Amet_0138 79afd41423dcca4eabfadd4d724c8847 287 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 78 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Amet_0138 79afd41423dcca4eabfadd4d724c8847 287 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 277 3.3E-64 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Amet_0138 79afd41423dcca4eabfadd4d724c8847 287 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 19 282 1.9E-85 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Amet_3362 3cbdd703f8a983778f3f66b9296633ec 243 Pfam PF11535 Calcium binding 144 240 4.1E-23 T 12-10-2018 IPR020994 Uncharacterised protein family, calcium binding protein, CcbP Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 4.6E-38 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 Gene3D G3DSA:3.30.230.10 214 326 2.4E-34 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 SMART SM01340 209 327 2.1E-48 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 Pfam PF08676 MutL C terminal dimerisation domain 451 592 4.1E-38 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 Gene3D G3DSA:3.30.565.10 3 213 1.1E-61 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 Gene3D G3DSA:2.30.42.20 453 635 7.0E-56 T 12-10-2018 Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 Gene3D G3DSA:3.30.1370.100 494 590 7.0E-56 T 12-10-2018 Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 5.2E-90 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 SUPERFAMILY SSF118116 450 635 1.44E-51 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 633 24.61 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 SUPERFAMILY SSF55874 2 213 6.42E-53 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 SUPERFAMILY SSF54211 191 327 4.55E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 SMART SM00853 452 593 1.3E-41 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 122 1.9E-11 T 12-10-2018 Amet_2543 ac4950b5ba0d6bd6fa7cd73869c7ea61 637 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site Amet_4046 31c1b84450ddf976aaaf75d86544a528 414 Pfam PF00176 SNF2 family N-terminal domain 17 234 2.4E-8 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Amet_4046 31c1b84450ddf976aaaf75d86544a528 414 SUPERFAMILY SSF52540 85 409 3.08E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4046 31c1b84450ddf976aaaf75d86544a528 414 Gene3D G3DSA:3.40.50.300 201 414 6.5E-21 T 12-10-2018 Amet_4046 31c1b84450ddf976aaaf75d86544a528 414 Gene3D G3DSA:3.40.50.10810 2 168 3.1E-15 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Amet_4046 31c1b84450ddf976aaaf75d86544a528 414 SUPERFAMILY SSF52540 10 173 1.25E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2158 ce7421cee784c8e91d60b9487d077e39 456 PRINTS PR00095 Anthranilate synthase component I signature 403 417 2.2E-17 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_2158 ce7421cee784c8e91d60b9487d077e39 456 PRINTS PR00095 Anthranilate synthase component I signature 308 321 2.2E-17 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_2158 ce7421cee784c8e91d60b9487d077e39 456 PRINTS PR00095 Anthranilate synthase component I signature 388 402 2.2E-17 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_2158 ce7421cee784c8e91d60b9487d077e39 456 PRINTS PR00095 Anthranilate synthase component I signature 294 307 2.2E-17 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_2158 ce7421cee784c8e91d60b9487d077e39 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 11 146 9.0E-38 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_2158 ce7421cee784c8e91d60b9487d077e39 456 Pfam PF00425 chorismate binding enzyme 193 446 2.6E-98 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Amet_2158 ce7421cee784c8e91d60b9487d077e39 456 SUPERFAMILY SSF56322 13 455 7.85E-149 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Amet_2158 ce7421cee784c8e91d60b9487d077e39 456 Gene3D G3DSA:3.60.120.10 2 456 4.6E-170 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Amet_2158 ce7421cee784c8e91d60b9487d077e39 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 99 449 2.0E-116 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Amet_4262 385eccb7b9d3f8656d3a0bcca76846a1 276 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 12 268 5.5E-46 T 12-10-2018 IPR017039 Virulence factor BrkB Amet_4262 385eccb7b9d3f8656d3a0bcca76846a1 276 Pfam PF03631 Virulence factor BrkB 19 268 3.9E-65 T 12-10-2018 IPR017039 Virulence factor BrkB Amet_4262 385eccb7b9d3f8656d3a0bcca76846a1 276 PIRSF PIRSF035875 1 275 6.5E-70 T 12-10-2018 IPR017039 Virulence factor BrkB Amet_0031 78b89d89323af823a904239cc92b0180 397 SUPERFAMILY SSF53383 2 389 3.58E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_0031 78b89d89323af823a904239cc92b0180 397 Gene3D G3DSA:3.90.1150.10 13 386 3.6E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0031 78b89d89323af823a904239cc92b0180 397 Gene3D G3DSA:3.40.640.10 62 282 3.6E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0031 78b89d89323af823a904239cc92b0180 397 Pfam PF00155 Aminotransferase class I and II 43 383 1.2E-34 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_3046 7e44bf31627ce5a3c38aaa512164c413 317 Gene3D G3DSA:3.40.50.150 117 312 2.6E-56 T 12-10-2018 Amet_3046 7e44bf31627ce5a3c38aaa512164c413 317 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 33.845 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Amet_3046 7e44bf31627ce5a3c38aaa512164c413 317 SUPERFAMILY SSF53335 63 307 5.48E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_3046 7e44bf31627ce5a3c38aaa512164c413 317 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 310 1.4E-93 T 12-10-2018 Amet_3046 7e44bf31627ce5a3c38aaa512164c413 317 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 304 3.6E-76 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Amet_3046 7e44bf31627ce5a3c38aaa512164c413 317 PIRSF PIRSF000401 1 313 2.2E-101 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Amet_3460 6099976e9d46af009205424f06f7f479 602 Pfam PF04205 FMN-binding domain 52 124 3.3E-16 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_3460 6099976e9d46af009205424f06f7f479 602 SMART SM00900 52 126 1.2E-23 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_3460 6099976e9d46af009205424f06f7f479 602 Pfam PF00890 FAD binding domain 152 584 1.6E-85 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3460 6099976e9d46af009205424f06f7f479 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 548 570 3.8E-5 T 12-10-2018 Amet_3460 6099976e9d46af009205424f06f7f479 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 172 3.8E-5 T 12-10-2018 Amet_3460 6099976e9d46af009205424f06f7f479 602 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 152 596 6.7E-124 T 12-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 Amet_3460 6099976e9d46af009205424f06f7f479 602 Gene3D G3DSA:3.50.50.60 151 598 2.7E-146 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3460 6099976e9d46af009205424f06f7f479 602 SUPERFAMILY SSF56425 409 544 2.79E-33 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3460 6099976e9d46af009205424f06f7f479 602 Gene3D G3DSA:3.90.700.10 388 540 2.7E-146 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3460 6099976e9d46af009205424f06f7f479 602 SUPERFAMILY SSF51905 146 600 5.39E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3358 ce430ceab97c1685c38d5f6c54aacda2 171 Gene3D G3DSA:3.30.450.20 63 166 1.3E-20 T 12-10-2018 Amet_3358 ce430ceab97c1685c38d5f6c54aacda2 171 SUPERFAMILY SSF103190 70 169 6.67E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_0186 51f6a8341f5652496ae9001030b5d9a9 381 Gene3D G3DSA:1.20.1600.10 54 265 1.3E-11 T 12-10-2018 Amet_0186 51f6a8341f5652496ae9001030b5d9a9 381 SUPERFAMILY SSF56954 53 369 9.16E-26 T 12-10-2018 Amet_0186 51f6a8341f5652496ae9001030b5d9a9 381 Gene3D G3DSA:1.20.1600.10 266 376 4.2E-10 T 12-10-2018 Amet_0186 51f6a8341f5652496ae9001030b5d9a9 381 Pfam PF02321 Outer membrane efflux protein 111 213 3.4E-6 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Amet_0186 51f6a8341f5652496ae9001030b5d9a9 381 Pfam PF02321 Outer membrane efflux protein 261 374 2.7E-7 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Amet_3215 18137add210ee24f5fc81b7c158ca4e9 312 SUPERFAMILY SSF46785 1 111 2.5E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3215 18137add210ee24f5fc81b7c158ca4e9 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3215 18137add210ee24f5fc81b7c158ca4e9 312 Pfam PF03466 LysR substrate binding domain 89 305 1.3E-29 T 12-10-2018 IPR005119 LysR, substrate-binding Amet_3215 18137add210ee24f5fc81b7c158ca4e9 312 SUPERFAMILY SSF53850 90 308 7.83E-31 T 12-10-2018 Amet_3215 18137add210ee24f5fc81b7c158ca4e9 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3215 18137add210ee24f5fc81b7c158ca4e9 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3215 18137add210ee24f5fc81b7c158ca4e9 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_3215 18137add210ee24f5fc81b7c158ca4e9 312 Gene3D G3DSA:1.10.10.10 1 91 1.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3215 18137add210ee24f5fc81b7c158ca4e9 312 Gene3D G3DSA:3.40.190.290 92 310 3.1E-42 T 12-10-2018 Amet_4328 1f7803b2a49cbc6a15c157d7842df815 179 Gene3D G3DSA:3.40.30.10 1 179 1.0E-69 T 12-10-2018 Amet_4328 1f7803b2a49cbc6a15c157d7842df815 179 Pfam PF00578 AhpC/TSA family 6 140 1.7E-38 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amet_4328 1f7803b2a49cbc6a15c157d7842df815 179 PIRSF PIRSF000239 1 179 5.8E-57 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amet_4328 1f7803b2a49cbc6a15c157d7842df815 179 SUPERFAMILY SSF52833 5 178 8.34E-58 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_2810 03b6cfbfc2e3f3d62af67bc7f5acf501 289 SUPERFAMILY SSF53850 35 288 6.27E-75 T 12-10-2018 Amet_2810 03b6cfbfc2e3f3d62af67bc7f5acf501 289 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 38 279 1.8E-61 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Amet_2810 03b6cfbfc2e3f3d62af67bc7f5acf501 289 Gene3D G3DSA:3.40.190.100 119 224 8.4E-97 T 12-10-2018 Amet_2810 03b6cfbfc2e3f3d62af67bc7f5acf501 289 Gene3D G3DSA:3.40.190.10 39 288 8.4E-97 T 12-10-2018 Amet_4569 21e35e3793fa34966bcb0c0c7a3cb022 423 SMART SM01008 22 126 4.4E-34 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_4569 21e35e3793fa34966bcb0c0c7a3cb022 423 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 143 413 1.1E-81 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amet_4569 21e35e3793fa34966bcb0c0c7a3cb022 423 Gene3D G3DSA:3.30.365.10 1 421 2.6E-132 T 12-10-2018 Amet_4569 21e35e3793fa34966bcb0c0c7a3cb022 423 SUPERFAMILY SSF56003 118 414 9.16E-88 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amet_4569 21e35e3793fa34966bcb0c0c7a3cb022 423 SUPERFAMILY SSF54665 4 145 3.01E-38 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Amet_4569 21e35e3793fa34966bcb0c0c7a3cb022 423 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 22 125 9.1E-28 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_0515 8f4b7e8967ca88832eea6c4499486a25 290 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 3 245 2.5E-70 T 12-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 Amet_0515 8f4b7e8967ca88832eea6c4499486a25 290 SUPERFAMILY SSF53850 26 282 1.8E-44 T 12-10-2018 Amet_0515 8f4b7e8967ca88832eea6c4499486a25 290 Gene3D G3DSA:3.40.190.10 113 220 6.2E-68 T 12-10-2018 Amet_0515 8f4b7e8967ca88832eea6c4499486a25 290 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 272 1.1E-75 T 12-10-2018 Amet_0515 8f4b7e8967ca88832eea6c4499486a25 290 Gene3D G3DSA:3.40.190.10 30 252 6.2E-68 T 12-10-2018 Amet_0515 8f4b7e8967ca88832eea6c4499486a25 290 SMART SM00062 27 261 0.0011 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amet_1991 8dfedf84d2810d483cc0257ed3fe4cfa 250 Gene3D G3DSA:1.10.10.1880 176 247 4.8E-22 T 12-10-2018 Amet_1991 8dfedf84d2810d483cc0257ed3fe4cfa 250 Pfam PF01936 NYN domain 6 139 5.6E-31 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type Amet_1991 8dfedf84d2810d483cc0257ed3fe4cfa 250 Gene3D G3DSA:3.40.50.1010 1 143 3.4E-13 T 12-10-2018 Amet_1991 8dfedf84d2810d483cc0257ed3fe4cfa 250 Pfam PF12872 OST-HTH/LOTUS domain 182 238 3.2E-16 T 12-10-2018 IPR025605 OST-HTH/LOTUS domain Amet_2182 74a1afb1c36dd80e2f9a1a3efe614cb5 272 SUPERFAMILY SSF81324 24 235 1.15E-45 T 12-10-2018 Amet_2182 74a1afb1c36dd80e2f9a1a3efe614cb5 272 PRINTS PR00169 Potassium channel signature 180 202 2.7E-29 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Amet_2182 74a1afb1c36dd80e2f9a1a3efe614cb5 272 PRINTS PR00169 Potassium channel signature 60 83 2.7E-29 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Amet_2182 74a1afb1c36dd80e2f9a1a3efe614cb5 272 PRINTS PR00169 Potassium channel signature 151 174 2.7E-29 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Amet_2182 74a1afb1c36dd80e2f9a1a3efe614cb5 272 PRINTS PR00169 Potassium channel signature 209 235 2.7E-29 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Amet_2182 74a1afb1c36dd80e2f9a1a3efe614cb5 272 PRINTS PR00169 Potassium channel signature 86 106 2.7E-29 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Amet_2182 74a1afb1c36dd80e2f9a1a3efe614cb5 272 PRINTS PR00169 Potassium channel signature 122 148 2.7E-29 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 Amet_2182 74a1afb1c36dd80e2f9a1a3efe614cb5 272 Pfam PF00520 Ion transport protein 26 237 2.1E-25 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 Amet_2182 74a1afb1c36dd80e2f9a1a3efe614cb5 272 Gene3D G3DSA:1.10.287.70 24 238 2.1E-54 T 12-10-2018 Amet_1479 faf0e465ca881df81db9d9d51b68b5a9 162 SUPERFAMILY SSF46785 23 140 4.08E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1479 faf0e465ca881df81db9d9d51b68b5a9 162 SMART SM00347 21 123 1.9E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1479 faf0e465ca881df81db9d9d51b68b5a9 162 Gene3D G3DSA:1.10.10.10 3 140 5.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1479 faf0e465ca881df81db9d9d51b68b5a9 162 Pfam PF01047 MarR family 31 88 6.7E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1479 faf0e465ca881df81db9d9d51b68b5a9 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.9E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1479 faf0e465ca881df81db9d9d51b68b5a9 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 2.9E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1479 faf0e465ca881df81db9d9d51b68b5a9 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.9E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1479 faf0e465ca881df81db9d9d51b68b5a9 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 2.9E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_0398 b235c4d44aae5a221c4b9d113aa4c16e 218 SUPERFAMILY SSF88659 138 216 3.73E-7 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_0398 b235c4d44aae5a221c4b9d113aa4c16e 218 Gene3D G3DSA:1.20.140.160 100 217 1.6E-6 T 12-10-2018 Amet_0398 b235c4d44aae5a221c4b9d113aa4c16e 218 SUPERFAMILY SSF88946 9 102 1.88E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0398 b235c4d44aae5a221c4b9d113aa4c16e 218 PIRSF PIRSF000770 2 218 5.8E-59 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_0398 b235c4d44aae5a221c4b9d113aa4c16e 218 Pfam PF04542 Sigma-70 region 2 38 104 2.3E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0398 b235c4d44aae5a221c4b9d113aa4c16e 218 Pfam PF13384 Homeodomain-like domain 171 207 1.8E-7 T 12-10-2018 Amet_0398 b235c4d44aae5a221c4b9d113aa4c16e 218 Gene3D G3DSA:1.20.120.1810 2 99 1.5E-20 T 12-10-2018 Amet_0398 b235c4d44aae5a221c4b9d113aa4c16e 218 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 60 73 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_0398 b235c4d44aae5a221c4b9d113aa4c16e 218 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 214 1.0E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_0048 8c274c839a8d7bcc5dc9596042a482a1 210 Pfam PF09335 SNARE associated Golgi protein 65 181 1.0E-25 T 12-10-2018 IPR032816 SNARE associated Golgi protein Amet_0657 19d20646678e57cbd67791d0a1658009 148 Pfam PF00571 CBS domain 79 128 3.0E-6 T 12-10-2018 IPR000644 CBS domain Amet_0657 19d20646678e57cbd67791d0a1658009 148 Pfam PF00571 CBS domain 11 59 7.8E-9 T 12-10-2018 IPR000644 CBS domain Amet_0657 19d20646678e57cbd67791d0a1658009 148 SUPERFAMILY SSF54631 1 128 2.15E-28 T 12-10-2018 Amet_0657 19d20646678e57cbd67791d0a1658009 148 SMART SM00116 83 129 6.3 T 12-10-2018 IPR000644 CBS domain Amet_0657 19d20646678e57cbd67791d0a1658009 148 SMART SM00116 12 60 1.9E-5 T 12-10-2018 IPR000644 CBS domain Amet_0657 19d20646678e57cbd67791d0a1658009 148 Gene3D G3DSA:3.10.580.10 1 144 9.7E-43 T 12-10-2018 Amet_2645 bc714d72903e47f2aad5a5aa7f257e78 149 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 134 1.7E-55 T 12-10-2018 IPR014229 Sporulation protein YtfJ Amet_2645 bc714d72903e47f2aad5a5aa7f257e78 149 PIRSF PIRSF021377 1 147 4.3E-52 T 12-10-2018 IPR014229 Sporulation protein YtfJ Amet_2645 bc714d72903e47f2aad5a5aa7f257e78 149 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 125 3.0E-30 T 12-10-2018 IPR014229 Sporulation protein YtfJ Amet_2905 59bcfa5e436b2bdaab0dea4eb767249a 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 294 1.3E-15 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2905 59bcfa5e436b2bdaab0dea4eb767249a 323 Gene3D G3DSA:3.40.50.300 3 322 1.0E-97 T 12-10-2018 Amet_2905 59bcfa5e436b2bdaab0dea4eb767249a 323 SUPERFAMILY SSF52540 5 249 1.39E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2905 59bcfa5e436b2bdaab0dea4eb767249a 323 SMART SM00382 34 227 4.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2905 59bcfa5e436b2bdaab0dea4eb767249a 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 227 314 1.0E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2905 59bcfa5e436b2bdaab0dea4eb767249a 323 Pfam PF00005 ABC transporter 26 177 6.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3417 e0d322e2b70df5fa249e6c31d858393a 320 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3417 e0d322e2b70df5fa249e6c31d858393a 320 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3417 e0d322e2b70df5fa249e6c31d858393a 320 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 4.4E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3417 e0d322e2b70df5fa249e6c31d858393a 320 SUPERFAMILY SSF46785 4 78 4.68E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3417 e0d322e2b70df5fa249e6c31d858393a 320 SMART SM00345 15 74 6.6E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3417 e0d322e2b70df5fa249e6c31d858393a 320 Gene3D G3DSA:1.10.10.10 8 133 1.7E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3108 8800699f48480f31e9004a95ee1bd16e 105 Gene3D G3DSA:1.20.1290.10 2 102 4.0E-23 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amet_3108 8800699f48480f31e9004a95ee1bd16e 105 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 99 2.5E-16 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Amet_3108 8800699f48480f31e9004a95ee1bd16e 105 SUPERFAMILY SSF69118 3 103 2.22E-23 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Amet_0496 89b909704a542a7ff56c6a51933154cf 429 Pfam PF00395 S-layer homology domain 373 415 8.0E-12 T 12-10-2018 IPR001119 S-layer homology domain Amet_0496 89b909704a542a7ff56c6a51933154cf 429 Pfam PF00395 S-layer homology domain 318 353 3.3E-10 T 12-10-2018 IPR001119 S-layer homology domain Amet_0496 89b909704a542a7ff56c6a51933154cf 429 Pfam PF00395 S-layer homology domain 254 292 3.0E-13 T 12-10-2018 IPR001119 S-layer homology domain Amet_4393 cfaae76a53ed1d7d8c7209f2dd89a232 307 SUPERFAMILY SSF52540 67 278 1.38E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4393 cfaae76a53ed1d7d8c7209f2dd89a232 307 Pfam PF13401 AAA domain 99 218 3.4E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4393 cfaae76a53ed1d7d8c7209f2dd89a232 307 Gene3D G3DSA:3.40.50.300 65 249 2.0E-8 T 12-10-2018 Amet_4393 cfaae76a53ed1d7d8c7209f2dd89a232 307 SUPERFAMILY SSF47413 11 59 3.84E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_1927 cfaae76a53ed1d7d8c7209f2dd89a232 307 SUPERFAMILY SSF52540 67 278 1.38E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1927 cfaae76a53ed1d7d8c7209f2dd89a232 307 Pfam PF13401 AAA domain 99 218 3.4E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1927 cfaae76a53ed1d7d8c7209f2dd89a232 307 Gene3D G3DSA:3.40.50.300 65 249 2.0E-8 T 12-10-2018 Amet_1927 cfaae76a53ed1d7d8c7209f2dd89a232 307 SUPERFAMILY SSF47413 11 59 3.84E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0389 cfaae76a53ed1d7d8c7209f2dd89a232 307 SUPERFAMILY SSF52540 67 278 1.38E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0389 cfaae76a53ed1d7d8c7209f2dd89a232 307 Pfam PF13401 AAA domain 99 218 3.4E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0389 cfaae76a53ed1d7d8c7209f2dd89a232 307 Gene3D G3DSA:3.40.50.300 65 249 2.0E-8 T 12-10-2018 Amet_0389 cfaae76a53ed1d7d8c7209f2dd89a232 307 SUPERFAMILY SSF47413 11 59 3.84E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 PIRSF PIRSF005419 1 675 8.0E-264 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 Pfam PF00771 FHIPEP family 15 665 4.8E-275 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 Gene3D G3DSA:3.40.30.60 341 484 1.4E-55 T 12-10-2018 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 5 673 4.6E-266 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 220 234 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 5.2E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 Gene3D G3DSA:1.10.8.540 485 573 1.5E-31 T 12-10-2018 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 Gene3D G3DSA:1.10.490.80 576 673 3.1E-21 T 12-10-2018 Amet_0615 00f22598bf0b4406181020ea24ab1af2 675 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 12-10-2018 IPR025505 FHIPEP conserved site Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 3.6E-28 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 3.6E-28 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 3.6E-28 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 3.6E-28 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 SUPERFAMILY SSF51569 1 287 6.59E-98 T 12-10-2018 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 Gene3D G3DSA:3.20.20.70 1 290 8.8E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 60.669 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 285 4.4E-99 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 SMART SM01130 1 288 2.0E-128 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 1.5E-93 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Amet_3197 c2b863720647b3b7f86ce00e786a0bc0 290 PIRSF PIRSF001365 1 289 2.4E-92 T 12-10-2018 IPR002220 DapA-like GO:0016829 Amet_2202 9f8634799f7423d79246f1214af37c70 678 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 104 5.0E-27 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Amet_2202 9f8634799f7423d79246f1214af37c70 678 Pfam PF00580 UvrD/REP helicase N-terminal domain 148 268 2.5E-32 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Amet_2202 9f8634799f7423d79246f1214af37c70 678 SUPERFAMILY SSF52540 8 623 4.48E-137 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2202 9f8634799f7423d79246f1214af37c70 678 Gene3D G3DSA:3.40.50.300 9 271 1.6E-79 T 12-10-2018 Amet_2202 9f8634799f7423d79246f1214af37c70 678 Gene3D G3DSA:3.40.50.300 281 619 5.5E-79 T 12-10-2018 Amet_2202 9f8634799f7423d79246f1214af37c70 678 Gene3D G3DSA:1.10.486.10 383 526 5.5E-79 T 12-10-2018 Amet_2202 9f8634799f7423d79246f1214af37c70 678 Gene3D G3DSA:1.10.10.160 109 188 1.6E-79 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily Amet_2202 9f8634799f7423d79246f1214af37c70 678 Pfam PF13361 UvrD-like helicase C-terminal domain 276 602 2.4E-49 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 Gene3D G3DSA:1.10.8.60 228 316 1.6E-18 T 12-10-2018 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 96 227 2.7E-19 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 Gene3D G3DSA:3.40.50.300 28 227 8.5E-58 T 12-10-2018 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 SMART SM00382 92 230 2.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 SUPERFAMILY SSF52540 55 297 9.49E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 PRINTS PR00819 CbxX/CfqX superfamily signature 177 189 5.0E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 PRINTS PR00819 CbxX/CfqX superfamily signature 147 166 5.0E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 PRINTS PR00819 CbxX/CfqX superfamily signature 215 234 5.0E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 PRINTS PR00819 CbxX/CfqX superfamily signature 274 286 5.0E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 PRINTS PR00819 CbxX/CfqX superfamily signature 95 110 5.0E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 PRINTS PR00819 CbxX/CfqX superfamily signature 133 147 5.0E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 PRINTS PR00819 CbxX/CfqX superfamily signature 198 215 5.0E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Amet_2540 dc617601c1b5669d7c5039d967b113ed 319 PRINTS PR00819 CbxX/CfqX superfamily signature 55 69 5.0E-61 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 Amet_4395 65969e6b7806e1797e9a6874b6cb8e46 78 Gene3D G3DSA:1.10.260.40 2 74 5.7E-6 T 12-10-2018 Amet_4395 65969e6b7806e1797e9a6874b6cb8e46 78 SUPERFAMILY SSF47413 5 59 8.16E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_3833 4075aaa4979d6dd532ba683a1f423867 149 Gene3D G3DSA:3.40.50.300 1 42 6.7E-6 T 12-10-2018 Amet_3833 4075aaa4979d6dd532ba683a1f423867 149 SUPERFAMILY SSF52540 4 139 2.63E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3833 4075aaa4979d6dd532ba683a1f423867 149 PIRSF PIRSF036409 3 148 6.8E-42 T 12-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Amet_3833 4075aaa4979d6dd532ba683a1f423867 149 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 4 142 2.7E-32 T 12-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Amet_1241 584e2f291a072e82f3daed2f252975f4 227 Gene3D G3DSA:1.10.3720.10 4 224 3.7E-51 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1241 584e2f291a072e82f3daed2f252975f4 227 SUPERFAMILY SSF161098 20 207 9.29E-41 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1241 584e2f291a072e82f3daed2f252975f4 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 116 2.2E-22 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Amet_1241 584e2f291a072e82f3daed2f252975f4 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 222 1.3E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_0608 baf3bf0dc13524ba52cc52ebd11a7b3d 517 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 516 2.1E-54 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_0608 baf3bf0dc13524ba52cc52ebd11a7b3d 517 PRINTS PR01009 Flagellar M-ring protein signature 346 370 7.6E-9 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_0608 baf3bf0dc13524ba52cc52ebd11a7b3d 517 PRINTS PR01009 Flagellar M-ring protein signature 153 167 7.6E-9 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_0608 baf3bf0dc13524ba52cc52ebd11a7b3d 517 PRINTS PR01009 Flagellar M-ring protein signature 198 216 7.6E-9 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_0608 baf3bf0dc13524ba52cc52ebd11a7b3d 517 PIRSF PIRSF004862 1 517 2.2E-87 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Amet_0608 baf3bf0dc13524ba52cc52ebd11a7b3d 517 Gene3D G3DSA:3.30.300.30 123 218 6.3E-9 T 12-10-2018 Amet_0608 baf3bf0dc13524ba52cc52ebd11a7b3d 517 Pfam PF08345 Flagellar M-ring protein C-terminal 256 403 1.5E-20 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal Amet_0608 baf3bf0dc13524ba52cc52ebd11a7b3d 517 Pfam PF01514 Secretory protein of YscJ/FliF family 32 222 1.3E-47 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF Amet_3154 67946ef8c61d2a796963c3d2e8fbdd2a 301 SUPERFAMILY SSF111331 1 299 1.22E-75 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Amet_3154 67946ef8c61d2a796963c3d2e8fbdd2a 301 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 296 1.0E-57 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase Amet_3154 67946ef8c61d2a796963c3d2e8fbdd2a 301 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 127 1.2E-32 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amet_3154 67946ef8c61d2a796963c3d2e8fbdd2a 301 SMART SM00046 3 132 1.4E-10 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Amet_3154 67946ef8c61d2a796963c3d2e8fbdd2a 301 Gene3D G3DSA:2.60.200.40 130 288 3.3E-37 T 12-10-2018 Amet_3154 67946ef8c61d2a796963c3d2e8fbdd2a 301 Gene3D G3DSA:3.40.50.10330 1 129 1.8E-39 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Amet_2172 d35413f2e09afb888ef0ec0faa4e2581 330 Pfam PF00990 Diguanylate cyclase, GGDEF domain 168 327 1.0E-40 T 12-10-2018 IPR000160 GGDEF domain Amet_2172 d35413f2e09afb888ef0ec0faa4e2581 330 SMART SM00267 156 330 2.0E-48 T 12-10-2018 IPR000160 GGDEF domain Amet_2172 d35413f2e09afb888ef0ec0faa4e2581 330 SUPERFAMILY SSF55785 31 145 1.45E-18 T 12-10-2018 IPR035965 PAS domain superfamily Amet_2172 d35413f2e09afb888ef0ec0faa4e2581 330 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 149 1.4E-15 T 12-10-2018 IPR000014 PAS domain Amet_2172 d35413f2e09afb888ef0ec0faa4e2581 330 SUPERFAMILY SSF55073 172 329 3.3E-42 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_2172 d35413f2e09afb888ef0ec0faa4e2581 330 Gene3D G3DSA:3.30.70.270 163 330 2.1E-49 T 12-10-2018 Amet_2172 d35413f2e09afb888ef0ec0faa4e2581 330 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 165 329 3.7E-46 T 12-10-2018 IPR000160 GGDEF domain Amet_2172 d35413f2e09afb888ef0ec0faa4e2581 330 Gene3D G3DSA:3.30.450.20 11 162 2.6E-24 T 12-10-2018 Amet_2172 d35413f2e09afb888ef0ec0faa4e2581 330 Pfam PF08448 PAS fold 34 142 7.3E-12 T 12-10-2018 IPR013656 PAS fold-4 Amet_1232 fd90ae13cc4222e9a32d79ffed8bb20f 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1232 fd90ae13cc4222e9a32d79ffed8bb20f 624 Pfam PF01609 Transposase DDE domain 262 549 9.5E-19 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_2194 aa500da348cce8b500b49fcbaa6be23e 163 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 4 162 1.3E-23 T 12-10-2018 IPR013343 CRISPR-associated protein Cas4 Amet_2194 aa500da348cce8b500b49fcbaa6be23e 163 Gene3D G3DSA:3.90.320.10 1 163 7.2E-6 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Amet_2194 aa500da348cce8b500b49fcbaa6be23e 163 Pfam PF01930 Domain of unknown function DUF83 5 163 8.0E-56 T 12-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 Amet_0053 b4f338265632779ebff0178d53b0bf68 469 Pfam PF03601 Conserved hypothetical protein 698 129 439 1.8E-46 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Amet_0053 b4f338265632779ebff0178d53b0bf68 469 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 355 462 2.0E-6 T 12-10-2018 Amet_3736 307d19f8d474a8b58977ca22dd90306d 190 SUPERFAMILY SSF52833 27 184 1.35E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_3736 307d19f8d474a8b58977ca22dd90306d 190 Hamap MF_00269 Thiol peroxidase [tpx]. 27 187 33.671 T 12-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 Amet_3736 307d19f8d474a8b58977ca22dd90306d 190 ProSitePatterns PS01265 Tpx family signature. 107 118 - T 12-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 Amet_3736 307d19f8d474a8b58977ca22dd90306d 190 Gene3D G3DSA:3.40.30.10 22 188 2.6E-42 T 12-10-2018 Amet_3736 307d19f8d474a8b58977ca22dd90306d 190 Pfam PF08534 Redoxin 43 183 1.4E-18 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Amet_1647 b66fda2f23e0fffe1b1cd2c984392dc3 317 SUPERFAMILY SSF52540 3 240 3.6E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1647 b66fda2f23e0fffe1b1cd2c984392dc3 317 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 236 1.4E-8 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_1647 b66fda2f23e0fffe1b1cd2c984392dc3 317 Gene3D G3DSA:3.40.50.300 1 270 8.4E-38 T 12-10-2018 Amet_1283 714ca915e53de9769566353762c931ca 365 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 6 354 7.5E-61 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_1283 714ca915e53de9769566353762c931ca 365 Pfam PF03845 Spore germination protein 6 313 2.7E-55 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_4660 7d9e765730ad18aed09875f02003dd9e 341 Pfam PF03590 Aspartate-ammonia ligase 26 251 1.1E-110 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Amet_4660 7d9e765730ad18aed09875f02003dd9e 341 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 28 334 4.4E-110 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Amet_4660 7d9e765730ad18aed09875f02003dd9e 341 PIRSF PIRSF001555 13 341 6.6E-162 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Amet_4660 7d9e765730ad18aed09875f02003dd9e 341 Gene3D G3DSA:3.30.930.10 18 337 1.7E-146 T 12-10-2018 Amet_4660 7d9e765730ad18aed09875f02003dd9e 341 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 17 337 51.589 T 12-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Amet_4660 7d9e765730ad18aed09875f02003dd9e 341 SUPERFAMILY SSF55681 21 334 2.14E-95 T 12-10-2018 Amet_3668 7e7c400e55a81950308630cb644ddc5c 131 Pfam PF06305 Lipopolysaccharide assembly protein A domain 21 81 2.6E-15 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Amet_3299 8cd820802f0c06cd02bd2487f3cee45e 163 SUPERFAMILY SSF52821 29 158 1.57E-18 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_3299 8cd820802f0c06cd02bd2487f3cee45e 163 SMART SM00450 40 157 1.3E-9 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3299 8cd820802f0c06cd02bd2487f3cee45e 163 Gene3D G3DSA:3.40.250.10 23 159 5.1E-17 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_3299 8cd820802f0c06cd02bd2487f3cee45e 163 Pfam PF00581 Rhodanese-like domain 41 153 4.8E-11 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3577 dd195146f87e7130342be3759024c405 511 SUPERFAMILY SSF64158 76 308 2.88E-87 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3577 dd195146f87e7130342be3759024c405 511 Gene3D G3DSA:3.40.1450.10 76 310 1.5E-222 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3577 dd195146f87e7130342be3759024c405 511 Pfam PF01676 Metalloenzyme superfamily 4 498 2.3E-75 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Amet_3577 dd195146f87e7130342be3759024c405 511 PIRSF PIRSF001492 1 511 3.9E-208 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3577 dd195146f87e7130342be3759024c405 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 510 50.078 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3577 dd195146f87e7130342be3759024c405 511 SUPERFAMILY SSF53649 3 509 1.01E-72 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Amet_3577 dd195146f87e7130342be3759024c405 511 Gene3D G3DSA:3.40.720.10 4 509 1.5E-222 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Amet_3577 dd195146f87e7130342be3759024c405 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 4 509 6.1E-215 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3577 dd195146f87e7130342be3759024c405 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 297 6.3E-85 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3123 8bd95a09cb44e056875db6943699d9c5 189 Gene3D G3DSA:1.10.530.10 35 189 4.3E-48 T 12-10-2018 Amet_3123 8bd95a09cb44e056875db6943699d9c5 189 Pfam PF01464 Transglycosylase SLT domain 44 153 5.6E-31 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Amet_3123 8bd95a09cb44e056875db6943699d9c5 189 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 62 90 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Amet_3123 8bd95a09cb44e056875db6943699d9c5 189 SUPERFAMILY SSF53955 14 185 4.74E-43 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.2E-22 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 1.2E-22 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 1.2E-22 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 285 303 1.2E-22 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 205 221 1.2E-22 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 249 270 1.2E-22 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.2E-22 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_0974 9601435ae330215565ff2313df304f44 421 SUPERFAMILY SSF51905 3 323 2.99E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0974 9601435ae330215565ff2313df304f44 421 Gene3D G3DSA:3.50.50.60 121 255 7.7E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 1.6E-24 T 12-10-2018 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.6E-24 T 12-10-2018 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.6E-24 T 12-10-2018 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 1.6E-24 T 12-10-2018 Amet_0974 9601435ae330215565ff2313df304f44 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 1.6E-24 T 12-10-2018 Amet_0974 9601435ae330215565ff2313df304f44 421 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 297 3.2E-35 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amet_0974 9601435ae330215565ff2313df304f44 421 Gene3D G3DSA:3.50.50.60 4 298 7.7E-61 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0047 3dbc88c911d0c0a53e5c7d7091ec9856 338 Pfam PF00899 ThiF family 5 242 3.6E-65 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Amet_0047 3dbc88c911d0c0a53e5c7d7091ec9856 338 SUPERFAMILY SSF69572 3 328 3.14E-88 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Amet_0047 3dbc88c911d0c0a53e5c7d7091ec9856 338 Gene3D G3DSA:3.40.50.720 2 248 3.1E-81 T 12-10-2018 Amet_2977 f000fb7027cc4b5f74b10975227efab1 256 Gene3D G3DSA:3.20.20.370 2 256 9.4E-105 T 12-10-2018 Amet_2977 f000fb7027cc4b5f74b10975227efab1 256 SUPERFAMILY SSF88713 3 252 2.22E-101 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amet_2977 f000fb7027cc4b5f74b10975227efab1 256 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 46.66 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Amet_2977 f000fb7027cc4b5f74b10975227efab1 256 Pfam PF03746 LamB/YcsF family 4 241 8.9E-104 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 Amet_0912 b5913e6582a9b4c6931441c3172724ee 148 Pfam PF04324 BFD-like [2Fe-2S] binding domain 85 142 2.3E-6 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Amet_0912 b5913e6582a9b4c6931441c3172724ee 148 Gene3D G3DSA:2.20.25.270 11 73 4.6E-10 T 12-10-2018 Amet_0912 b5913e6582a9b4c6931441c3172724ee 148 Gene3D G3DSA:1.10.10.1100 74 144 4.9E-25 T 12-10-2018 Amet_0976 41caae416d80231f72ea771a902a37c6 235 SUPERFAMILY SSF55021 147 225 2.21E-6 T 12-10-2018 Amet_0976 41caae416d80231f72ea771a902a37c6 235 Gene3D G3DSA:3.30.70.260 147 209 6.3E-6 T 12-10-2018 Amet_0976 41caae416d80231f72ea771a902a37c6 235 PRINTS PR01837 MgtC/SapB protein signature 14 33 6.9E-44 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_0976 41caae416d80231f72ea771a902a37c6 235 PRINTS PR01837 MgtC/SapB protein signature 33 51 6.9E-44 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_0976 41caae416d80231f72ea771a902a37c6 235 PRINTS PR01837 MgtC/SapB protein signature 93 117 6.9E-44 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_0976 41caae416d80231f72ea771a902a37c6 235 PRINTS PR01837 MgtC/SapB protein signature 66 88 6.9E-44 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_0976 41caae416d80231f72ea771a902a37c6 235 Pfam PF02308 MgtC family 11 137 1.6E-37 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_2982 a7a77a59f0e1ce96373388f24a7373ac 461 Pfam PF09972 Predicted membrane protein (DUF2207) 9 412 2.3E-68 T 12-10-2018 IPR018702 Protein of unknown function DUF2207, membrane Amet_2613 1b6874d4cf29fd150863b0ce2adbfc98 120 Pfam PF01381 Helix-turn-helix 3 57 9.0E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2613 1b6874d4cf29fd150863b0ce2adbfc98 120 Gene3D G3DSA:1.10.260.40 1 105 9.9E-24 T 12-10-2018 Amet_2613 1b6874d4cf29fd150863b0ce2adbfc98 120 SMART SM00530 2 57 8.1E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2613 1b6874d4cf29fd150863b0ce2adbfc98 120 SUPERFAMILY SSF47413 2 61 2.59E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0340 45d8c308d3db198f7b6a1ebec0fdc973 146 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 122 1.5E-29 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Amet_0340 45d8c308d3db198f7b6a1ebec0fdc973 146 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 112 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Amet_0340 45d8c308d3db198f7b6a1ebec0fdc973 146 SUPERFAMILY SSF53927 6 145 5.86E-43 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Amet_0340 45d8c308d3db198f7b6a1ebec0fdc973 146 PIRSF PIRSF006019 1 146 6.4E-57 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Amet_0340 45d8c308d3db198f7b6a1ebec0fdc973 146 Gene3D G3DSA:3.40.140.10 1 146 6.1E-51 T 12-10-2018 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Pfam PF01138 3' exoribonuclease family, domain 1 13 142 1.5E-19 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Pfam PF01138 3' exoribonuclease family, domain 1 320 453 7.7E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 690 30.932 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 SUPERFAMILY SSF54211 288 484 2.68E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 PIRSF PIRSF005499 1 704 2.8E-297 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 SUPERFAMILY SSF55666 450 557 4.06E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 SUPERFAMILY SSF54791 552 637 3.8E-24 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Gene3D G3DSA:3.30.230.70 1 227 7.9E-82 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Pfam PF00575 S1 RNA binding domain 616 687 2.6E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 688 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 SUPERFAMILY SSF50249 609 691 4.48E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 SUPERFAMILY SSF55666 136 229 1.96E-29 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Gene3D G3DSA:2.40.50.140 619 689 8.2E-28 T 12-10-2018 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Gene3D G3DSA:3.30.1370.10 547 618 2.9E-21 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Pfam PF03725 3' exoribonuclease family, domain 2 456 524 2.5E-6 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 2.6E-14 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 316 2.2E-10 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 SMART SM00322 549 614 2.9E-14 T 12-10-2018 IPR004087 K Homology domain GO:0003676 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 SMART SM00316 617 687 3.6E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Gene3D G3DSA:3.30.230.70 234 546 5.0E-115 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 Pfam PF00013 KH domain 553 610 5.2E-11 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Amet_2667 96fee0291e3ccdfd0e26ca0719763d2c 704 SUPERFAMILY SSF54211 4 142 1.01E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_3534 3f5d14ba1c6835332c44e55489e87f53 554 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 118 128 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3534 3f5d14ba1c6835332c44e55489e87f53 554 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 460 471 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3534 3f5d14ba1c6835332c44e55489e87f53 554 SUPERFAMILY SSF143975 3 371 6.93E-138 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3534 3f5d14ba1c6835332c44e55489e87f53 554 Pfam PF00920 Dehydratase family 30 550 6.1E-225 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3534 3f5d14ba1c6835332c44e55489e87f53 554 Gene3D G3DSA:3.50.30.80 372 523 3.4E-58 T 12-10-2018 Amet_3534 3f5d14ba1c6835332c44e55489e87f53 554 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 553 47.14 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3534 3f5d14ba1c6835332c44e55489e87f53 554 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 13 553 1.4E-237 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_3534 3f5d14ba1c6835332c44e55489e87f53 554 SUPERFAMILY SSF52016 372 553 1.26E-62 T 12-10-2018 Amet_2516 93888c9fc196d7a5f7c21e7ac5791154 373 Pfam PF12555 Thiamine pyrophosphokinase C terminal 320 371 6.1E-17 T 12-10-2018 IPR022215 Thiamine pyrophosphokinase C-terminal Amet_2516 93888c9fc196d7a5f7c21e7ac5791154 373 SUPERFAMILY SSF63999 138 323 1.4E-29 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amet_2516 93888c9fc196d7a5f7c21e7ac5791154 373 Gene3D G3DSA:3.40.50.10240 161 254 1.0E-10 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amet_4166 f0e63bf4380e21880b7ae53b96fe52a8 149 Pfam PF00571 CBS domain 3 55 1.0E-16 T 12-10-2018 IPR000644 CBS domain Amet_4166 f0e63bf4380e21880b7ae53b96fe52a8 149 Pfam PF00571 CBS domain 93 144 7.2E-16 T 12-10-2018 IPR000644 CBS domain Amet_4166 f0e63bf4380e21880b7ae53b96fe52a8 149 PIRSF PIRSF037253 1 70 2.8E-13 T 12-10-2018 IPR017158 Transcription regulator, CBS domain-containing, predicted Amet_4166 f0e63bf4380e21880b7ae53b96fe52a8 149 PIRSF PIRSF037253 63 149 8.8E-12 T 12-10-2018 IPR017158 Transcription regulator, CBS domain-containing, predicted Amet_4166 f0e63bf4380e21880b7ae53b96fe52a8 149 Gene3D G3DSA:3.10.580.10 1 148 3.1E-42 T 12-10-2018 Amet_4166 f0e63bf4380e21880b7ae53b96fe52a8 149 SUPERFAMILY SSF54631 1 146 1.89E-40 T 12-10-2018 Amet_4166 f0e63bf4380e21880b7ae53b96fe52a8 149 SMART SM00116 10 58 3.7E-14 T 12-10-2018 IPR000644 CBS domain Amet_4166 f0e63bf4380e21880b7ae53b96fe52a8 149 SMART SM00116 100 147 1.9E-8 T 12-10-2018 IPR000644 CBS domain Amet_3099 2795db396eaa3aef94f6423de68a1344 73 Gene3D G3DSA:2.30.31.70 1 73 2.3E-34 T 12-10-2018 Amet_3099 2795db396eaa3aef94f6423de68a1344 73 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 19 67 5.1E-12 T 12-10-2018 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0006355 Amet_3099 2795db396eaa3aef94f6423de68a1344 73 PIRSF PIRSF037246 1 73 4.7E-39 T 12-10-2018 IPR017154 Uncharacterised conserved protein UCP037246 Amet_1365 1f33f293591a2633a5bced8b0dc7e260 377 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 12 372 2.9E-113 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_1365 1f33f293591a2633a5bced8b0dc7e260 377 Pfam PF01098 Cell cycle protein 16 372 1.5E-87 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_4223 23b76f2895865907a052ecb135921971 117 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 4 117 8.8E-51 T 12-10-2018 IPR014204 Sporulation stage V, protein AE Amet_4223 23b76f2895865907a052ecb135921971 117 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 4 111 2.4E-39 T 12-10-2018 IPR005562 SpoVA Amet_0747 82655ef626467ba3bcea88c48f21b69f 102 Gene3D G3DSA:3.30.2310.20 1 102 3.7E-23 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Amet_0747 82655ef626467ba3bcea88c48f21b69f 102 SUPERFAMILY SSF143011 1 92 2.12E-6 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Amet_0747 82655ef626467ba3bcea88c48f21b69f 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 98 1.4E-18 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Amet_0911 120fc30990e0928d96ce1f02295498d7 139 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 25 96 3.2E-6 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amet_0911 120fc30990e0928d96ce1f02295498d7 139 SUPERFAMILY SSF56349 19 119 1.77E-8 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_0911 120fc30990e0928d96ce1f02295498d7 139 Gene3D G3DSA:1.10.150.130 12 123 2.1E-9 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Amet_2681 02ac1afbda8faf6843b2a71620e3f90a 347 SUPERFAMILY SSF50156 103 196 4.34E-18 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Amet_2681 02ac1afbda8faf6843b2a71620e3f90a 347 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 131 344 2.0E-47 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Amet_2681 02ac1afbda8faf6843b2a71620e3f90a 347 Pfam PF13180 PDZ domain 131 191 2.8E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Amet_2681 02ac1afbda8faf6843b2a71620e3f90a 347 SMART SM00228 115 187 0.0023 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Amet_2681 02ac1afbda8faf6843b2a71620e3f90a 347 Gene3D G3DSA:2.30.42.10 130 214 3.5E-20 T 12-10-2018 Amet_2681 02ac1afbda8faf6843b2a71620e3f90a 347 Pfam PF02163 Peptidase family M50 19 332 2.2E-74 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Amet_1387 3d88b65b965a65da07513a1852001f19 710 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 690 2.6E-190 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Amet_1387 3d88b65b965a65da07513a1852001f19 710 Gene3D G3DSA:3.20.70.20 130 670 3.7E-116 T 12-10-2018 Amet_1387 3d88b65b965a65da07513a1852001f19 710 SUPERFAMILY SSF51998 123 674 9.16E-162 T 12-10-2018 Amet_1387 3d88b65b965a65da07513a1852001f19 710 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 689 5.6E-171 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Amet_1387 3d88b65b965a65da07513a1852001f19 710 Pfam PF03477 ATP cone domain 4 93 6.0E-20 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 SMART SM00895 84 207 5.0E-12 T 12-10-2018 IPR011711 GntR, C-terminal Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 SUPERFAMILY SSF46785 8 78 5.64E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 74 7.5E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 SMART SM00345 16 74 6.5E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 Pfam PF07729 FCD domain 88 206 1.4E-18 T 12-10-2018 IPR011711 GntR, C-terminal Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 Gene3D G3DSA:1.10.10.10 8 75 3.5E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 SUPERFAMILY SSF48008 82 207 8.37E-20 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_1294 91532f3d9b9cbf80355259e7f5aff0b2 223 Gene3D G3DSA:1.20.120.530 80 211 3.7E-22 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 PRINTS PR00173 Glutamate-aspartate symporter signature 219 238 1.9E-58 T 12-10-2018 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 PRINTS PR00173 Glutamate-aspartate symporter signature 184 203 1.9E-58 T 12-10-2018 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 PRINTS PR00173 Glutamate-aspartate symporter signature 72 97 1.9E-58 T 12-10-2018 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 PRINTS PR00173 Glutamate-aspartate symporter signature 321 340 1.9E-58 T 12-10-2018 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 PRINTS PR00173 Glutamate-aspartate symporter signature 42 62 1.9E-58 T 12-10-2018 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 PRINTS PR00173 Glutamate-aspartate symporter signature 286 312 1.9E-58 T 12-10-2018 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 PRINTS PR00173 Glutamate-aspartate symporter signature 348 368 1.9E-58 T 12-10-2018 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 1.9E-58 T 12-10-2018 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 Pfam PF00375 Sodium:dicarboxylate symporter family 3 393 5.7E-136 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 289 312 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 Gene3D G3DSA:1.10.3860.10 1 405 4.5E-147 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Amet_3175 cf2d0e695fb949b49a29acef9b09c4e8 407 SUPERFAMILY SSF118215 3 394 8.76E-125 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Amet_0518 0eff56af6c23e91cf9b5eeaaeaf4efc6 295 PIRSF PIRSF003097 2 295 1.2E-78 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 SMART SM00382 331 475 1.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 Pfam PF02954 Bacterial regulatory protein, Fis family 579 618 1.1E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 398 413 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 SUPERFAMILY SSF46689 524 620 2.06E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 335 348 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 Gene3D G3DSA:1.10.8.60 483 548 1.0E-20 T 12-10-2018 Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 525 534 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 Gene3D G3DSA:1.10.10.60 571 621 3.1E-12 T 12-10-2018 Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 SUPERFAMILY SSF52540 310 550 7.59E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 Pfam PF00158 Sigma-54 interaction domain 311 478 3.4E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Amet_2060 2cee04cee93fa4e0d75730ea4dd46a50 627 Gene3D G3DSA:3.40.50.300 298 482 2.5E-67 T 12-10-2018 Amet_0145 cefe14319f6690b2d7f2b8ce396b35f9 155 Pfam PF11385 Protein of unknown function (DUF3189) 2 148 6.5E-39 T 12-10-2018 IPR021525 Protein of unknown function DUF3189 Amet_2900 1fde11749d453b4d9e87755942e09ba9 335 Pfam PF04471 Restriction endonuclease 122 231 3.9E-8 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Amet_2900 1fde11749d453b4d9e87755942e09ba9 335 Gene3D G3DSA:3.40.1340.10 97 229 3.2E-6 T 12-10-2018 IPR036710 RNA polymerase Rpb5, N-terminal domain superfamily GO:0003677|GO:0003899|GO:0005634|GO:0006351 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 578 637 9.8E-13 T 12-10-2018 IPR001357 BRCT domain Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 PIRSF PIRSF001604 1 660 7.4E-229 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 311 384 5.2E-29 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Pfam PF12826 Helix-hairpin-helix motif 498 560 1.2E-20 T 12-10-2018 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SUPERFAMILY SSF52113 577 658 5.61E-16 T 12-10-2018 IPR036420 BRCT domain superfamily Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SUPERFAMILY SSF47781 393 570 1.11E-55 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Pfam PF14520 Helix-hairpin-helix domain 433 488 2.4E-5 T 12-10-2018 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Gene3D G3DSA:3.40.50.10190 569 660 2.7E-23 T 12-10-2018 IPR036420 BRCT domain superfamily Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SMART SM00278 433 452 0.028 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SMART SM00278 499 518 41.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SMART SM00278 467 486 0.44 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SMART SM00278 531 550 120.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Gene3D G3DSA:1.10.287.610 2 68 1.4E-21 T 12-10-2018 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SMART SM00532 2 435 1.4E-190 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Gene3D G3DSA:2.40.50.140 308 379 2.5E-28 T 12-10-2018 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 10 639 1.4E-215 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Hamap MF_01588 DNA ligase [ligA]. 1 660 45.968 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SMART SM00292 579 646 2.6E-8 T 12-10-2018 IPR001357 BRCT domain Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Gene3D G3DSA:1.10.150.20 419 492 1.0E-23 T 12-10-2018 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 308 5.2E-105 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Gene3D G3DSA:1.10.150.20 493 568 1.7E-22 T 12-10-2018 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SUPERFAMILY SSF56091 2 305 1.02E-103 T 12-10-2018 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 Gene3D G3DSA:3.30.470.90 69 307 9.2E-81 T 12-10-2018 Amet_0942 e718fc230eeca0dd7e6e981e9455299e 660 SUPERFAMILY SSF50249 308 383 3.77E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_4346 4c1484332fad3629ce2e124222690570 120 Gene3D G3DSA:3.10.450.40 1 115 3.7E-5 T 12-10-2018 Amet_4346 4c1484332fad3629ce2e124222690570 120 SUPERFAMILY SSF160719 19 103 2.22E-6 T 12-10-2018 Amet_1972 4c1484332fad3629ce2e124222690570 120 Gene3D G3DSA:3.10.450.40 1 115 3.7E-5 T 12-10-2018 Amet_1972 4c1484332fad3629ce2e124222690570 120 SUPERFAMILY SSF160719 19 103 2.22E-6 T 12-10-2018 Amet_0435 4c1484332fad3629ce2e124222690570 120 Gene3D G3DSA:3.10.450.40 1 115 3.7E-5 T 12-10-2018 Amet_0435 4c1484332fad3629ce2e124222690570 120 SUPERFAMILY SSF160719 19 103 2.22E-6 T 12-10-2018 Amet_1077 5d62aa3dede2c41fd0dd81b003a72d8d 514 SUPERFAMILY SSF56322 45 512 4.97E-152 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Amet_1077 5d62aa3dede2c41fd0dd81b003a72d8d 514 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 57 511 2.1E-181 T 12-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_1077 5d62aa3dede2c41fd0dd81b003a72d8d 514 Pfam PF00425 chorismate binding enzyme 250 503 4.5E-101 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Amet_1077 5d62aa3dede2c41fd0dd81b003a72d8d 514 Pfam PF04715 Anthranilate synthase component I, N terminal region 57 195 3.7E-35 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_1077 5d62aa3dede2c41fd0dd81b003a72d8d 514 Gene3D G3DSA:3.60.120.10 26 514 3.1E-177 T 12-10-2018 IPR005801 ADC synthase GO:0009058 Amet_1077 5d62aa3dede2c41fd0dd81b003a72d8d 514 PRINTS PR00095 Anthranilate synthase component I signature 365 378 1.0E-25 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_1077 5d62aa3dede2c41fd0dd81b003a72d8d 514 PRINTS PR00095 Anthranilate synthase component I signature 351 364 1.0E-25 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_1077 5d62aa3dede2c41fd0dd81b003a72d8d 514 PRINTS PR00095 Anthranilate synthase component I signature 445 459 1.0E-25 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_1077 5d62aa3dede2c41fd0dd81b003a72d8d 514 PRINTS PR00095 Anthranilate synthase component I signature 460 474 1.0E-25 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Amet_3220 b83404749e77074821213c16ad3040be 465 SUPERFAMILY SSF89000 299 447 6.28E-51 T 12-10-2018 Amet_3220 b83404749e77074821213c16ad3040be 465 Gene3D G3DSA:3.20.20.70 1 453 5.9E-171 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3220 b83404749e77074821213c16ad3040be 465 Pfam PF02436 Conserved carboxylase domain 296 447 2.6E-52 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Amet_3220 b83404749e77074821213c16ad3040be 465 SUPERFAMILY SSF51569 2 280 3.3E-92 T 12-10-2018 Amet_3220 b83404749e77074821213c16ad3040be 465 Pfam PF00682 HMGL-like 3 268 1.8E-53 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amet_2186 9def15a1da97669e61c11285c0bf9438 155 Gene3D G3DSA:1.10.260.40 2 72 8.8E-16 T 12-10-2018 Amet_2186 9def15a1da97669e61c11285c0bf9438 155 SUPERFAMILY SSF47413 3 70 9.12E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2186 9def15a1da97669e61c11285c0bf9438 155 Pfam PF12844 Helix-turn-helix domain 9 71 2.6E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2186 9def15a1da97669e61c11285c0bf9438 155 SMART SM00530 11 67 4.4E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_3547 0e14cbb385bbe1e2f8bfdb9a1b70fef0 70 SUPERFAMILY SSF64307 2 70 1.14E-16 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_3547 0e14cbb385bbe1e2f8bfdb9a1b70fef0 70 Gene3D G3DSA:3.30.110.40 3 70 3.0E-21 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_3547 0e14cbb385bbe1e2f8bfdb9a1b70fef0 70 Pfam PF01206 Sulfurtransferase TusA 4 70 1.3E-19 T 12-10-2018 IPR001455 TusA-like domain Amet_0731 2bffc1fbf5de248259dc24f2733f91c1 75 Gene3D G3DSA:3.30.70.1680 1 62 3.3E-28 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Amet_0731 2bffc1fbf5de248259dc24f2733f91c1 75 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 8.0E-20 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Amet_0731 2bffc1fbf5de248259dc24f2733f91c1 75 Pfam PF02599 Global regulator protein family 1 53 5.4E-26 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Amet_0731 2bffc1fbf5de248259dc24f2733f91c1 75 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 62 2.4E-27 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Amet_0731 2bffc1fbf5de248259dc24f2733f91c1 75 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 71 18.176 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Amet_0731 2bffc1fbf5de248259dc24f2733f91c1 75 SUPERFAMILY SSF117130 1 55 6.02E-20 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Amet_4764 cbac0071440416c5c0add9b1fd2c9478 325 SUPERFAMILY SSF52540 176 313 1.37E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4764 cbac0071440416c5c0add9b1fd2c9478 325 Pfam PF01695 IstB-like ATP binding protein 151 297 1.2E-17 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_4764 cbac0071440416c5c0add9b1fd2c9478 325 SMART SM00382 184 308 2.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4764 cbac0071440416c5c0add9b1fd2c9478 325 Gene3D G3DSA:3.40.50.300 140 325 6.6E-41 T 12-10-2018 Amet_4193 524c2655b2067f017ee1394d3afddff4 107 Gene3D G3DSA:1.20.58.280 1 101 2.2E-37 T 12-10-2018 Amet_4193 524c2655b2067f017ee1394d3afddff4 107 SUPERFAMILY SSF46973 2 98 1.96E-35 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 Amet_4193 524c2655b2067f017ee1394d3afddff4 107 PIRSF PIRSF000699 1 104 2.1E-36 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Amet_4193 524c2655b2067f017ee1394d3afddff4 107 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 5.1E-36 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 Pfam PF13481 AAA domain 67 219 1.4E-19 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 Gene3D G3DSA:3.30.230.10 327 455 1.5E-17 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 SMART SM00382 87 241 2.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 SUPERFAMILY SSF52540 67 283 2.44E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 342 425 4.6E-10 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 Hamap MF_01498 DNA repair protein RadA [radA]. 21 454 42.715 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 PRINTS PR01874 DNA repair protein radA signature 245 271 6.1E-92 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 PRINTS PR01874 DNA repair protein radA signature 319 342 6.1E-92 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 PRINTS PR01874 DNA repair protein radA signature 10 34 6.1E-92 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 PRINTS PR01874 DNA repair protein radA signature 171 195 6.1E-92 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 PRINTS PR01874 DNA repair protein radA signature 121 138 6.1E-92 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 PRINTS PR01874 DNA repair protein radA signature 210 238 6.1E-92 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 PRINTS PR01874 DNA repair protein radA signature 79 107 6.1E-92 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 Gene3D G3DSA:3.40.50.300 58 284 4.0E-45 T 12-10-2018 Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 SUPERFAMILY SSF54211 252 454 4.93E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_4511 03c27dc27469e9185a0eddf2ca973e38 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 450 2.2E-177 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Amet_2549 587dffbd959bd5e624403c1a094cd905 81 Pfam PF10779 Haemolysin XhlA 13 78 2.7E-23 T 12-10-2018 IPR019715 Haemolysin XhlA Amet_0555 c998104c2908eed29bcb58f77af5c765 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 171 9.6E-22 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Amet_0555 c998104c2908eed29bcb58f77af5c765 483 PRINTS PR00084 Mannitol dehydrogenase signature 234 249 1.5E-6 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Amet_0555 c998104c2908eed29bcb58f77af5c765 483 PRINTS PR00084 Mannitol dehydrogenase signature 18 28 1.5E-6 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Amet_0555 c998104c2908eed29bcb58f77af5c765 483 PRINTS PR00084 Mannitol dehydrogenase signature 204 217 1.5E-6 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Amet_0555 c998104c2908eed29bcb58f77af5c765 483 Gene3D G3DSA:3.40.50.720 2 268 4.6E-57 T 12-10-2018 Amet_0555 c998104c2908eed29bcb58f77af5c765 483 SUPERFAMILY SSF48179 272 482 1.87E-48 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_0555 c998104c2908eed29bcb58f77af5c765 483 Gene3D G3DSA:1.10.1040.10 271 482 6.1E-62 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amet_0555 c998104c2908eed29bcb58f77af5c765 483 SUPERFAMILY SSF51735 10 267 3.78E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0555 c998104c2908eed29bcb58f77af5c765 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 203 457 5.8E-62 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Amet_0555 c998104c2908eed29bcb58f77af5c765 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 482 55.921 T 12-10-2018 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 Amet_0348 694218ad831df141310392a01a806003 88 PRINTS PR00124 ATP synthase C subunit signature 37 52 9.8E-21 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0348 694218ad831df141310392a01a806003 88 PRINTS PR00124 ATP synthase C subunit signature 16 35 9.8E-21 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0348 694218ad831df141310392a01a806003 88 PRINTS PR00124 ATP synthase C subunit signature 54 79 9.8E-21 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0348 694218ad831df141310392a01a806003 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 44 65 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0348 694218ad831df141310392a01a806003 88 Gene3D G3DSA:1.20.20.10 1 82 2.7E-32 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0348 694218ad831df141310392a01a806003 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 11 79 15.978 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0348 694218ad831df141310392a01a806003 88 Pfam PF00137 ATP synthase subunit C 16 78 2.1E-18 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Amet_0348 694218ad831df141310392a01a806003 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 81 1.8E-20 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Amet_0348 694218ad831df141310392a01a806003 88 SUPERFAMILY SSF81333 9 83 1.44E-20 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Amet_2205 b35607637108dd2707dbce2ab5c6400e 385 PIRSF PIRSF005572 1 382 2.0E-121 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Amet_2205 b35607637108dd2707dbce2ab5c6400e 385 Gene3D G3DSA:3.40.640.10 60 236 8.9E-139 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_2205 b35607637108dd2707dbce2ab5c6400e 385 Pfam PF00266 Aminotransferase class-V 3 367 1.8E-79 T 12-10-2018 IPR000192 Aminotransferase class V domain Amet_2205 b35607637108dd2707dbce2ab5c6400e 385 SUPERFAMILY SSF53383 3 374 1.24E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2205 b35607637108dd2707dbce2ab5c6400e 385 Gene3D G3DSA:1.10.260.50 14 280 8.9E-139 T 12-10-2018 Amet_2205 b35607637108dd2707dbce2ab5c6400e 385 Gene3D G3DSA:3.90.1150.10 3 369 8.9E-139 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3922 685d331d154eebdabe24b8e7d92dce55 231 SUPERFAMILY SSF54001 17 165 4.77E-21 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amet_3922 685d331d154eebdabe24b8e7d92dce55 231 Gene3D G3DSA:3.10.620.30 1 143 7.6E-15 T 12-10-2018 Amet_3922 685d331d154eebdabe24b8e7d92dce55 231 Pfam PF01841 Transglutaminase-like superfamily 29 131 1.9E-13 T 12-10-2018 IPR002931 Transglutaminase-like Amet_3587 2a06127404b4a0b24d55dd30e845aad5 505 PIRSF PIRSF028991 1 505 3.7E-194 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted Amet_3587 2a06127404b4a0b24d55dd30e845aad5 505 SUPERFAMILY SSF51998 27 484 1.07E-69 T 12-10-2018 Amet_3587 2a06127404b4a0b24d55dd30e845aad5 505 Pfam PF11230 Protein of unknown function (DUF3029) 17 504 2.6E-213 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted Amet_3587 2a06127404b4a0b24d55dd30e845aad5 505 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 7 504 3.7E-232 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted Amet_3589 c1568d8ecb36820a6868daf2084f1a72 397 Gene3D G3DSA:3.40.718.10 112 237 2.4E-11 T 12-10-2018 Amet_3589 c1568d8ecb36820a6868daf2084f1a72 397 PIRSF PIRSF036593 5 391 2.9E-184 T 12-10-2018 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit Amet_3589 c1568d8ecb36820a6868daf2084f1a72 397 Pfam PF02504 Fatty acid synthesis protein 32 370 7.6E-66 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Amet_3589 c1568d8ecb36820a6868daf2084f1a72 397 SUPERFAMILY SSF53659 32 294 1.15E-26 T 12-10-2018 Amet_1729 922c86d1574207e181761453b5c9d450 66 Gene3D G3DSA:1.10.1660.10 9 60 5.1E-9 T 12-10-2018 Amet_1729 922c86d1574207e181761453b5c9d450 66 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 12 59 3.1E-17 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Amet_1729 922c86d1574207e181761453b5c9d450 66 Pfam PF12728 Helix-turn-helix domain 12 61 3.2E-19 T 12-10-2018 Amet_1729 922c86d1574207e181761453b5c9d450 66 SUPERFAMILY SSF46955 11 60 6.41E-7 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.2E-9 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 SUPERFAMILY SSF55781 58 182 3.92E-5 T 12-10-2018 Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 Gene3D G3DSA:3.30.450.40 56 183 7.1E-42 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 182 1.1E-47 T 12-10-2018 IPR039472 Sporulation stage V protein T, GAF domain Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 Gene3D G3DSA:2.10.260.10 1 51 1.0E-22 T 12-10-2018 Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 SUPERFAMILY SSF89447 2 52 1.1E-13 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 182 4.3E-86 T 12-10-2018 IPR014213 Sporulation stage V, protein T Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 PIRSF PIRSF026579 1 183 4.0E-88 T 12-10-2018 IPR014213 Sporulation stage V, protein T Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 SMART SM00966 8 52 2.2E-9 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_0162 adae0ae6dc639f23736134f2e55c6aa8 183 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 5.0E-15 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_2625 0319faca785821a877be6876c38d92be 280 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 280 30.955 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Amet_2625 0319faca785821a877be6876c38d92be 280 Gene3D G3DSA:3.40.1010.20 4 277 1.3E-97 T 12-10-2018 Amet_2625 0319faca785821a877be6876c38d92be 280 Pfam PF02401 LytB protein 4 277 1.3E-93 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Amet_2625 0319faca785821a877be6876c38d92be 280 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 279 1.2E-87 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Amet_2625 0319faca785821a877be6876c38d92be 280 Gene3D G3DSA:3.40.50.11270 12 97 1.3E-97 T 12-10-2018 Amet_2625 0319faca785821a877be6876c38d92be 280 Gene3D G3DSA:3.40.1010.20 98 190 1.3E-97 T 12-10-2018 Amet_2171 c76f5b7a3f57266f452fc0a7783f7418 436 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 431 25.159 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Amet_2171 c76f5b7a3f57266f452fc0a7783f7418 436 Gene3D G3DSA:3.30.930.10 1 335 2.3E-99 T 12-10-2018 Amet_2171 c76f5b7a3f57266f452fc0a7783f7418 436 SUPERFAMILY SSF55681 7 330 6.51E-67 T 12-10-2018 Amet_2171 c76f5b7a3f57266f452fc0a7783f7418 436 Gene3D G3DSA:3.40.50.800 336 431 9.7E-25 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Amet_2171 c76f5b7a3f57266f452fc0a7783f7418 436 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 420 3.8E-109 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Amet_2171 c76f5b7a3f57266f452fc0a7783f7418 436 PIRSF PIRSF001549 1 431 9.0E-118 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Amet_2171 c76f5b7a3f57266f452fc0a7783f7418 436 Pfam PF13393 Histidyl-tRNA synthetase 10 325 7.9E-40 T 12-10-2018 Amet_2171 c76f5b7a3f57266f452fc0a7783f7418 436 Pfam PF03129 Anticodon binding domain 343 428 5.2E-17 T 12-10-2018 IPR004154 Anticodon-binding Amet_2171 c76f5b7a3f57266f452fc0a7783f7418 436 SUPERFAMILY SSF52954 340 431 1.81E-21 T 12-10-2018 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 198 9.5E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 SMART SM00448 1 114 8.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 SMART SM00421 142 199 5.5E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 Pfam PF00072 Response regulator receiver domain 3 113 1.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 Gene3D G3DSA:3.40.50.12740 1 203 1.8E-58 T 12-10-2018 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 SUPERFAMILY SSF46894 126 199 4.08E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 SUPERFAMILY SSF52172 1 132 3.42E-29 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 5.6E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 5.6E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_0489 c50cbacc6c22a9239ebc1be9a78e9064 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 5.6E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1788 08f7fa03f5560ba0cacf07bd006a6444 316 Pfam PF16472 Domain of unknown function (DUF5050) 30 303 3.4E-60 T 12-10-2018 IPR032485 Domain of unknown function DUF5050 Amet_1788 08f7fa03f5560ba0cacf07bd006a6444 316 SUPERFAMILY SSF69304 84 236 3.66E-10 T 12-10-2018 Amet_3009 78c03e98713c16286acba38a1d62af9a 616 SUPERFAMILY SSF56425 406 545 1.65E-19 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3009 78c03e98713c16286acba38a1d62af9a 616 Gene3D G3DSA:3.50.50.60 150 609 1.2E-106 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3009 78c03e98713c16286acba38a1d62af9a 616 SUPERFAMILY SSF51905 144 613 2.65E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3009 78c03e98713c16286acba38a1d62af9a 616 Gene3D G3DSA:3.90.1010.20 71 139 1.4E-5 T 12-10-2018 Amet_3009 78c03e98713c16286acba38a1d62af9a 616 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 170 9.7E-5 T 12-10-2018 Amet_3009 78c03e98713c16286acba38a1d62af9a 616 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 561 583 9.7E-5 T 12-10-2018 Amet_3009 78c03e98713c16286acba38a1d62af9a 616 Pfam PF00890 FAD binding domain 150 591 9.6E-52 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3009 78c03e98713c16286acba38a1d62af9a 616 SMART SM00900 48 122 1.6E-19 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_3009 78c03e98713c16286acba38a1d62af9a 616 Gene3D G3DSA:3.90.700.10 378 549 1.2E-106 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3009 78c03e98713c16286acba38a1d62af9a 616 Pfam PF04205 FMN-binding domain 48 119 8.9E-15 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_1129 3269cb19ef9f74d37e7f303eae2e3fe0 341 Pfam PF09084 NMT1/THI5 like 74 276 3.5E-9 T 12-10-2018 IPR015168 SsuA/THI5-like Amet_1129 3269cb19ef9f74d37e7f303eae2e3fe0 341 Gene3D G3DSA:3.40.190.10 127 236 4.7E-89 T 12-10-2018 Amet_1129 3269cb19ef9f74d37e7f303eae2e3fe0 341 Gene3D G3DSA:3.40.190.10 51 337 4.7E-89 T 12-10-2018 Amet_1129 3269cb19ef9f74d37e7f303eae2e3fe0 341 PIRSF PIRSF027386 1 341 5.8E-132 T 12-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type Amet_1129 3269cb19ef9f74d37e7f303eae2e3fe0 341 SUPERFAMILY SSF53850 49 337 4.8E-31 T 12-10-2018 Amet_4037 3b985385be78031eddd9f60914b02d56 80 SUPERFAMILY SSF159034 25 68 2.88E-5 T 12-10-2018 IPR037252 Mib/herc2 domain superfamily GO:0004842|GO:0046872 Amet_4037 3b985385be78031eddd9f60914b02d56 80 Pfam PF14192 Domain of unknown function (DUF4314) 6 72 4.8E-32 T 12-10-2018 IPR025463 Domain of unknown function DUF4314 Amet_2936 65784b606dd0e67320c48480b9ce72d3 217 SUPERFAMILY SSF54001 8 160 1.28E-7 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amet_2936 65784b606dd0e67320c48480b9ce72d3 217 Gene3D G3DSA:3.90.1720.10 8 168 3.3E-9 T 12-10-2018 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 Gene3D G3DSA:3.20.20.120 128 430 5.9E-143 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 PRINTS PR00148 Enolase signature 161 174 3.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 PRINTS PR00148 Enolase signature 37 51 3.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 PRINTS PR00148 Enolase signature 365 382 3.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 PRINTS PR00148 Enolase signature 107 123 3.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 PRINTS PR00148 Enolase signature 313 324 3.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 PRINTS PR00148 Enolase signature 336 350 3.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 1.4E-220 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 Pfam PF03952 Enolase, N-terminal domain 4 134 3.4E-61 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 SMART SM01192 139 427 1.7E-225 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 PIRSF PIRSF001400 1 427 1.7E-199 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 SUPERFAMILY SSF51604 138 427 6.65E-135 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 1.6E-139 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 SMART SM01193 4 134 4.5E-99 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 SUPERFAMILY SSF54826 3 138 6.04E-60 T 12-10-2018 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 Hamap MF_00318 Enolase [eno]. 2 413 47.328 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Amet_3576 dc0703237d69b6ac646cf5fcfb6dd08e 430 Gene3D G3DSA:3.30.390.10 1 126 6.7E-58 T 12-10-2018 IPR029017 Enolase-like, N-terminal Amet_4635 ce7a15da353717f8085a3ef6217d87e6 441 Pfam PF14403 Circularly permuted ATP-grasp type 2 105 397 8.0E-14 T 12-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Amet_4635 ce7a15da353717f8085a3ef6217d87e6 441 SUPERFAMILY SSF56059 7 427 4.66E-50 T 12-10-2018 Amet_1179 d3b9621957f156215c1916ae72a34210 246 Pfam PF13649 Methyltransferase domain 36 134 1.4E-17 T 12-10-2018 Amet_1179 d3b9621957f156215c1916ae72a34210 246 Gene3D G3DSA:3.40.50.150 9 229 8.6E-41 T 12-10-2018 Amet_1179 d3b9621957f156215c1916ae72a34210 246 Gene3D G3DSA:2.20.25.110 142 204 8.6E-41 T 12-10-2018 Amet_1179 d3b9621957f156215c1916ae72a34210 246 SUPERFAMILY SSF53335 3 246 1.59E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2431 02305df8363f6fc6a74ad43e446def9e 177 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 3 145 6.2E-35 T 12-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 Gene3D G3DSA:1.10.10.350 398 492 7.2E-26 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 3 489 32.651 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 224 4.3E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 4.3E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 4.3E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 200 210 4.3E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 4.3E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 Gene3D G3DSA:3.40.50.620 1 336 1.5E-151 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 327 3.4E-110 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 SUPERFAMILY SSF48163 321 488 5.62E-40 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 486 7.4E-175 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Amet_4503 658e9045ffa6a3c73a72a24503bd01af 493 SUPERFAMILY SSF52374 4 317 9.12E-111 T 12-10-2018 Amet_0981 3739b9498a90101c50cce1ca460b5576 105 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Amet_0981 3739b9498a90101c50cce1ca460b5576 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 6.0E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0981 3739b9498a90101c50cce1ca460b5576 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 6.0E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0981 3739b9498a90101c50cce1ca460b5576 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 6.0E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0981 3739b9498a90101c50cce1ca460b5576 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 6.0E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0981 3739b9498a90101c50cce1ca460b5576 105 Gene3D G3DSA:1.10.10.10 1 91 7.3E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0981 3739b9498a90101c50cce1ca460b5576 105 SUPERFAMILY SSF46785 3 85 2.91E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0981 3739b9498a90101c50cce1ca460b5576 105 SMART SM00418 6 84 1.1E-29 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0981 3739b9498a90101c50cce1ca460b5576 105 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 3.0E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0826 6514c519fbb765debe4fc5d5b76aabb5 309 PIRSF PIRSF000535 1 309 3.2E-88 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Amet_0826 6514c519fbb765debe4fc5d5b76aabb5 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amet_0826 6514c519fbb765debe4fc5d5b76aabb5 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 306 3.3E-102 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Amet_0826 6514c519fbb765debe4fc5d5b76aabb5 309 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 305 3.8E-100 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 Amet_0826 6514c519fbb765debe4fc5d5b76aabb5 309 SUPERFAMILY SSF53613 1 291 1.2E-68 T 12-10-2018 IPR029056 Ribokinase-like Amet_0826 6514c519fbb765debe4fc5d5b76aabb5 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amet_0826 6514c519fbb765debe4fc5d5b76aabb5 309 Pfam PF00294 pfkB family carbohydrate kinase 7 292 1.5E-51 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Amet_0826 6514c519fbb765debe4fc5d5b76aabb5 309 Gene3D G3DSA:3.40.1190.20 1 309 1.8E-99 T 12-10-2018 IPR029056 Ribokinase-like Amet_4528 d86fd4d424d5a36350965d83b49d3ff4 268 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 256 36.974 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Amet_4528 d86fd4d424d5a36350965d83b49d3ff4 268 SUPERFAMILY SSF53067 123 255 1.04E-36 T 12-10-2018 Amet_4528 d86fd4d424d5a36350965d83b49d3ff4 268 SUPERFAMILY SSF53067 1 122 4.96E-38 T 12-10-2018 Amet_4528 d86fd4d424d5a36350965d83b49d3ff4 268 Pfam PF03309 Type III pantothenate kinase 2 205 2.3E-74 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Amet_4528 d86fd4d424d5a36350965d83b49d3ff4 268 Gene3D G3DSA:3.30.420.40 1 88 4.5E-32 T 12-10-2018 Amet_4528 d86fd4d424d5a36350965d83b49d3ff4 268 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 251 1.3E-79 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Amet_4528 d86fd4d424d5a36350965d83b49d3ff4 268 Gene3D G3DSA:3.30.420.40 89 267 7.9E-61 T 12-10-2018 Amet_2836 69d0b5febccb955e2f05ddff28907a7c 442 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 21 429 3.1E-89 T 12-10-2018 IPR021145 Portal protein Amet_1591 d1fb2a7f64d69e4f8ec8838a3b692f81 175 Gene3D G3DSA:1.10.10.10 17 106 7.3E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1591 d1fb2a7f64d69e4f8ec8838a3b692f81 175 Pfam PF14277 Domain of unknown function (DUF4364) 12 173 4.0E-51 T 12-10-2018 IPR025374 Protein of unknown function DUF4364 Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 Gene3D G3DSA:2.30.330.10 241 330 1.7E-10 T 12-10-2018 IPR036429 SpoA-like superfamily Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 SUPERFAMILY SSF101801 250 328 3.27E-16 T 12-10-2018 IPR036429 SpoA-like superfamily Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 322 6.6E-20 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 PIRSF PIRSF002888 1 331 2.7E-103 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 Gene3D G3DSA:3.40.1550.10 45 231 1.0E-58 T 12-10-2018 IPR028976 CheC-like superfamily Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 Pfam PF02154 Flagellar motor switch protein FliM 39 229 2.3E-61 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 2.2E-97 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 6.1E-24 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 6.1E-24 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 6.1E-24 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 6.1E-24 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Amet_0612 15cce93cfe1d976abdb476fbf857de1d 331 SUPERFAMILY SSF103039 45 230 1.1E-27 T 12-10-2018 IPR028976 CheC-like superfamily Amet_4231 b7c329c158618d5b7be6654505b58dd0 227 Pfam PF01987 Mitochondrial biogenesis AIM24 3 208 3.3E-58 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Amet_4231 b7c329c158618d5b7be6654505b58dd0 227 SUPERFAMILY SSF51219 1 226 1.1E-68 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Amet_4231 b7c329c158618d5b7be6654505b58dd0 227 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 1 221 2.7E-35 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Amet_4231 b7c329c158618d5b7be6654505b58dd0 227 Gene3D G3DSA:3.60.160.10 1 225 7.3E-77 T 12-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily Amet_4709 0d36bc23cbbdc39725ec434b424a5024 172 Pfam PF04143 Sulphur transport 3 162 1.3E-38 T 12-10-2018 IPR007272 Sulphur transport domain Amet_3593 3b60b3616dac451baa31276ccb9570cd 428 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 2 425 8.6E-212 T 12-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Amet_3593 3b60b3616dac451baa31276ccb9570cd 428 PIRSF PIRSF011588 1 428 5.9E-217 T 12-10-2018 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 Amet_4181 e8acf97c8a073fd2b0bb3d82291ec3f0 378 PIRSF PIRSF038994 1 377 6.9E-127 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Amet_4181 e8acf97c8a073fd2b0bb3d82291ec3f0 378 SUPERFAMILY SSF51556 55 348 2.67E-95 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_4181 e8acf97c8a073fd2b0bb3d82291ec3f0 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 2 374 2.1E-108 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Amet_4181 e8acf97c8a073fd2b0bb3d82291ec3f0 378 Pfam PF01979 Amidohydrolase family 51 374 1.9E-27 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_4181 e8acf97c8a073fd2b0bb3d82291ec3f0 378 SUPERFAMILY SSF51338 2 374 1.2E-11 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4181 e8acf97c8a073fd2b0bb3d82291ec3f0 378 Gene3D G3DSA:2.30.40.10 9 374 1.6E-136 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4181 e8acf97c8a073fd2b0bb3d82291ec3f0 378 Gene3D G3DSA:3.20.20.140 55 348 1.6E-136 T 12-10-2018 Amet_0650 a0e6de9694da857edf0668e33c9899b1 356 Gene3D G3DSA:3.40.50.1970 2 168 1.4E-61 T 12-10-2018 Amet_0650 a0e6de9694da857edf0668e33c9899b1 356 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 339 2.2E-115 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amet_0650 a0e6de9694da857edf0668e33c9899b1 356 PIRSF PIRSF001455 6 353 3.5E-110 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amet_0650 a0e6de9694da857edf0668e33c9899b1 356 Pfam PF01761 3-dehydroquinate synthase 63 320 3.3E-101 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amet_0650 a0e6de9694da857edf0668e33c9899b1 356 SUPERFAMILY SSF56796 7 338 1.57E-101 T 12-10-2018 Amet_0650 a0e6de9694da857edf0668e33c9899b1 356 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 62.891 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Amet_0650 a0e6de9694da857edf0668e33c9899b1 356 Gene3D G3DSA:1.20.1090.10 169 351 3.7E-60 T 12-10-2018 Amet_2357 d3240b5f6635683173e77e7809865836 502 Gene3D G3DSA:3.80.30.20 144 498 5.3E-75 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_2357 d3240b5f6635683173e77e7809865836 502 Pfam PF04055 Radical SAM superfamily 185 359 1.3E-21 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_2357 d3240b5f6635683173e77e7809865836 502 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 99 497 3.2E-167 T 12-10-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ Amet_2357 d3240b5f6635683173e77e7809865836 502 SMART SM00729 179 402 6.1E-46 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_2357 d3240b5f6635683173e77e7809865836 502 SUPERFAMILY SSF102114 173 489 1.11E-78 T 12-10-2018 Amet_3399 957b626f890b858938707823a5a5c4e1 452 Hamap MF_01221 UPF0210 protein . 2 452 53.489 T 12-10-2018 IPR007841 Uncharacterised protein family UPF0210 Amet_3399 957b626f890b858938707823a5a5c4e1 452 Pfam PF05167 Uncharacterised ACR (DUF711) 13 416 7.2E-185 T 12-10-2018 IPR007841 Uncharacterised protein family UPF0210 Amet_3399 957b626f890b858938707823a5a5c4e1 452 SUPERFAMILY SSF51998 3 447 1.37E-182 T 12-10-2018 Amet_3399 957b626f890b858938707823a5a5c4e1 452 Gene3D G3DSA:3.20.70.20 1 452 3.7E-185 T 12-10-2018 Amet_3155 56a235606ae10ac79cbc4f8856cd03ef 494 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 4.8E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3155 56a235606ae10ac79cbc4f8856cd03ef 494 Gene3D G3DSA:3.90.1150.10 112 473 4.8E-114 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3155 56a235606ae10ac79cbc4f8856cd03ef 494 Pfam PF00155 Aminotransferase class I and II 132 469 3.4E-35 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_3155 56a235606ae10ac79cbc4f8856cd03ef 494 Gene3D G3DSA:1.10.10.10 4 81 6.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3155 56a235606ae10ac79cbc4f8856cd03ef 494 SUPERFAMILY SSF53383 109 475 3.63E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3155 56a235606ae10ac79cbc4f8856cd03ef 494 SMART SM00345 21 80 3.7E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3155 56a235606ae10ac79cbc4f8856cd03ef 494 SUPERFAMILY SSF46785 11 82 1.53E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3155 56a235606ae10ac79cbc4f8856cd03ef 494 Gene3D G3DSA:3.40.640.10 149 368 4.8E-114 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 SUPERFAMILY SSF51735 183 417 2.56E-80 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_0815 5f87bdd165b2e451832f6c449429345c 417 SMART SM00839 184 415 1.4E-117 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 36 164 4.5E-53 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 PIRSF PIRSF000185 3 417 1.7E-165 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 195 1.4E-31 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 93 107 1.4E-31 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 215 235 1.4E-31 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 343 354 1.4E-31 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 Gene3D G3DSA:3.40.50.720 183 417 5.6E-89 T 12-10-2018 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 Gene3D G3DSA:3.40.50.10860 38 181 2.2E-60 T 12-10-2018 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 SUPERFAMILY SSF53223 6 184 1.95E-65 T 12-10-2018 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 183 415 5.9E-77 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_0815 5f87bdd165b2e451832f6c449429345c 417 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 101 114 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_3639 340d9cd7f81ecf4c98c3001a42d12005 160 Pfam PF04306 Protein of unknown function (DUF456) 21 157 2.3E-32 T 12-10-2018 IPR007403 Protein of unknown function DUF456 Amet_1054 a8698bc7b989cef7f79afad532cadb43 180 Pfam PF02517 CAAX protease self-immunity 73 171 4.0E-12 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_0831 3a14c5c6d395631bf28d45d2847cd0de 296 SMART SM00478 124 287 2.6E-14 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amet_0831 3a14c5c6d395631bf28d45d2847cd0de 296 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 18 119 6.0E-25 T 12-10-2018 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357|Reactome: R-HSA-5649702 Amet_0831 3a14c5c6d395631bf28d45d2847cd0de 296 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 120 270 1.8E-12 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Amet_0831 3a14c5c6d395631bf28d45d2847cd0de 296 Gene3D G3DSA:3.30.310.260 1 113 8.6E-41 T 12-10-2018 Amet_0831 3a14c5c6d395631bf28d45d2847cd0de 296 Gene3D G3DSA:1.10.1670.50 236 296 6.5E-28 T 12-10-2018 Amet_0831 3a14c5c6d395631bf28d45d2847cd0de 296 SUPERFAMILY SSF48150 114 287 5.65E-38 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Amet_0831 3a14c5c6d395631bf28d45d2847cd0de 296 SUPERFAMILY SSF55945 11 113 1.57E-24 T 12-10-2018 Amet_0831 3a14c5c6d395631bf28d45d2847cd0de 296 Gene3D G3DSA:1.10.340.30 114 235 2.3E-37 T 12-10-2018 Amet_1986 e063f53114a58ec7e7cb2f6abfd25a42 789 Pfam PF02901 Pyruvate formate lyase-like 3 650 9.6E-219 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Amet_1986 e063f53114a58ec7e7cb2f6abfd25a42 789 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 787 8.9E-207 T 12-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Amet_1986 e063f53114a58ec7e7cb2f6abfd25a42 789 Gene3D G3DSA:3.20.70.40 2 789 2.2E-293 T 12-10-2018 Amet_1986 e063f53114a58ec7e7cb2f6abfd25a42 789 Pfam PF01228 Glycine radical 667 770 1.8E-26 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 Amet_1986 e063f53114a58ec7e7cb2f6abfd25a42 789 SUPERFAMILY SSF51998 2 787 3.66E-225 T 12-10-2018 Amet_3335 c1bc44aace297971d724ac1594460d24 287 Pfam PF01171 PP-loop family 55 218 1.2E-16 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Amet_3335 c1bc44aace297971d724ac1594460d24 287 Gene3D G3DSA:3.40.50.620 24 277 3.8E-46 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3335 c1bc44aace297971d724ac1594460d24 287 PIRSF PIRSF004976 8 285 7.1E-67 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Amet_3335 c1bc44aace297971d724ac1594460d24 287 SUPERFAMILY SSF52402 31 230 6.62E-45 T 12-10-2018 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 Gene3D G3DSA:3.90.780.10 344 547 1.4E-55 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 Pfam PF02872 5'-nucleotidase, C-terminal domain 357 502 7.4E-29 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 SUPERFAMILY SSF56300 30 333 1.12E-77 T 12-10-2018 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 Gene3D G3DSA:3.60.21.10 29 334 1.4E-88 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 PRINTS PR01607 Apyrase family signature 217 234 1.3E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 PRINTS PR01607 Apyrase family signature 484 503 1.3E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 PRINTS PR01607 Apyrase family signature 397 420 1.3E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 PRINTS PR01607 Apyrase family signature 34 52 1.3E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 PRINTS PR01607 Apyrase family signature 244 267 1.3E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 PRINTS PR01607 Apyrase family signature 270 290 1.3E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 ProSitePatterns PS00786 5'-nucleotidase signature 2. 120 131 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 Pfam PF00149 Calcineurin-like phosphoesterase 37 261 1.0E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 SUPERFAMILY SSF55816 356 548 6.15E-43 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 Pfam PF00395 S-layer homology domain 677 720 3.6E-9 T 12-10-2018 IPR001119 S-layer homology domain Amet_3609 6aff2c467c33067491ec1b7fe9646224 729 Pfam PF00395 S-layer homology domain 615 655 1.8E-4 T 12-10-2018 IPR001119 S-layer homology domain Amet_1296 52d67632ba19cfa195035c30a977aac2 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.2E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amet_1296 52d67632ba19cfa195035c30a977aac2 66 PRINTS PR00050 Cold shock protein signature 39 57 1.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amet_1296 52d67632ba19cfa195035c30a977aac2 66 PRINTS PR00050 Cold shock protein signature 24 33 1.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amet_1296 52d67632ba19cfa195035c30a977aac2 66 PRINTS PR00050 Cold shock protein signature 4 19 1.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Amet_1296 52d67632ba19cfa195035c30a977aac2 66 PIRSF PIRSF002599 1 66 9.5E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 Amet_1296 52d67632ba19cfa195035c30a977aac2 66 SMART SM00357 3 66 6.2E-31 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 Amet_1296 52d67632ba19cfa195035c30a977aac2 66 Gene3D G3DSA:2.40.50.140 1 66 2.3E-30 T 12-10-2018 Amet_1296 52d67632ba19cfa195035c30a977aac2 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site Amet_1296 52d67632ba19cfa195035c30a977aac2 66 SUPERFAMILY SSF50249 1 64 1.22E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2686 48bded117573bb335f6668e710a8a953 185 SUPERFAMILY SSF55194 6 184 2.49E-71 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Amet_2686 48bded117573bb335f6668e710a8a953 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 3.0E-70 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Amet_2686 48bded117573bb335f6668e710a8a953 185 Gene3D G3DSA:3.30.1360.40 31 105 1.1E-67 T 12-10-2018 Amet_2686 48bded117573bb335f6668e710a8a953 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.611 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Amet_2686 48bded117573bb335f6668e710a8a953 185 Pfam PF01765 Ribosome recycling factor 20 183 8.3E-65 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Amet_2686 48bded117573bb335f6668e710a8a953 185 Gene3D G3DSA:1.10.132.20 12 182 1.1E-67 T 12-10-2018 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 2.7E-57 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 5.1E-138 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.616 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 Gene3D G3DSA:2.40.50.140 1 114 6.8E-48 T 12-10-2018 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 PIRSF PIRSF002158 3 276 1.0E-98 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 SMART SM01383 42 118 2.8E-43 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 Gene3D G3DSA:4.10.950.10 197 276 3.3E-35 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 SUPERFAMILY SSF50249 3 125 1.65E-51 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 Gene3D G3DSA:2.30.30.30 118 196 1.3E-34 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.3E-33 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 SMART SM01382 124 253 1.5E-95 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Amet_4475 5ba4d8d01eef4cd5c73ee4435d7fe542 276 SUPERFAMILY SSF50104 126 271 2.53E-62 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amet_2682 1685bb0db8d413a291f68cc93b685495 382 SUPERFAMILY SSF55347 124 262 3.6E-60 T 12-10-2018 Amet_2682 1685bb0db8d413a291f68cc93b685495 382 SUPERFAMILY SSF51735 3 148 5.14E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2682 1685bb0db8d413a291f68cc93b685495 382 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 130 2.3E-43 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amet_2682 1685bb0db8d413a291f68cc93b685495 382 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 375 3.9E-43 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amet_2682 1685bb0db8d413a291f68cc93b685495 382 PIRSF PIRSF006205 2 382 6.8E-159 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amet_2682 1685bb0db8d413a291f68cc93b685495 382 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 380 47.037 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amet_2682 1685bb0db8d413a291f68cc93b685495 382 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 377 2.5E-156 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amet_2682 1685bb0db8d413a291f68cc93b685495 382 Gene3D G3DSA:1.10.1740.10 300 382 1.0E-26 T 12-10-2018 Amet_2682 1685bb0db8d413a291f68cc93b685495 382 SUPERFAMILY SSF69055 290 381 5.89E-33 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amet_2682 1685bb0db8d413a291f68cc93b685495 382 Gene3D G3DSA:3.40.50.720 1 148 7.4E-52 T 12-10-2018 Amet_2682 1685bb0db8d413a291f68cc93b685495 382 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 5.1E-40 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Amet_1377 9b130ef0f105f6168425235fd65426a6 559 SMART SM00065 224 359 7.8E-5 T 12-10-2018 IPR003018 GAF domain GO:0005515 Amet_1377 9b130ef0f105f6168425235fd65426a6 559 SUPERFAMILY SSF55874 417 558 4.58E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1377 9b130ef0f105f6168425235fd65426a6 559 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 558 1.6E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1377 9b130ef0f105f6168425235fd65426a6 559 SUPERFAMILY SSF55781 226 354 2.7E-9 T 12-10-2018 Amet_1377 9b130ef0f105f6168425235fd65426a6 559 Gene3D G3DSA:3.30.565.10 416 559 1.7E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1377 9b130ef0f105f6168425235fd65426a6 559 Gene3D G3DSA:1.10.1760.20 31 200 7.5E-7 T 12-10-2018 Amet_1377 9b130ef0f105f6168425235fd65426a6 559 Gene3D G3DSA:3.30.450.40 225 363 5.4E-9 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_1377 9b130ef0f105f6168425235fd65426a6 559 Pfam PF06580 Histidine kinase 364 442 1.8E-26 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Amet_1377 9b130ef0f105f6168425235fd65426a6 559 Pfam PF07694 5TMR of 5TMR-LYT 27 193 2.8E-56 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 Amet_0600 bd358424ad8a57cd0a49e99b26ad6ce5 410 SUPERFAMILY SSF111369 44 289 1.12E-6 T 12-10-2018 Amet_0600 bd358424ad8a57cd0a49e99b26ad6ce5 410 Gene3D G3DSA:2.40.420.20 39 395 1.6E-54 T 12-10-2018 Amet_0600 bd358424ad8a57cd0a49e99b26ad6ce5 410 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 295 4.2E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Amet_0600 bd358424ad8a57cd0a49e99b26ad6ce5 410 Gene3D G3DSA:1.10.287.470 89 218 1.6E-54 T 12-10-2018 Amet_0600 bd358424ad8a57cd0a49e99b26ad6ce5 410 Gene3D G3DSA:2.40.50.100 55 252 1.6E-54 T 12-10-2018 Amet_0600 bd358424ad8a57cd0a49e99b26ad6ce5 410 Gene3D G3DSA:2.40.30.170 44 336 1.6E-54 T 12-10-2018 Amet_3122 3f83e9e2614dc0f7728c382e840fcc38 541 Gene3D G3DSA:3.40.190.10 57 519 3.1E-128 T 12-10-2018 Amet_3122 3f83e9e2614dc0f7728c382e840fcc38 541 Gene3D G3DSA:3.10.105.10 288 506 3.1E-128 T 12-10-2018 Amet_3122 3f83e9e2614dc0f7728c382e840fcc38 541 SUPERFAMILY SSF53850 43 534 6.34E-121 T 12-10-2018 Amet_3122 3f83e9e2614dc0f7728c382e840fcc38 541 Gene3D G3DSA:3.90.76.10 77 198 3.1E-128 T 12-10-2018 Amet_3122 3f83e9e2614dc0f7728c382e840fcc38 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 89 450 1.6E-81 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_3122 3f83e9e2614dc0f7728c382e840fcc38 541 PIRSF PIRSF002741 1 541 1.5E-117 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_0356 f177278b408de9b092893343e7f58c7c 183 SUPERFAMILY SSF160515 4 128 1.7E-30 T 12-10-2018 Amet_0356 f177278b408de9b092893343e7f58c7c 183 Pfam PF07997 Protein of unknown function (DUF1694) 4 117 4.3E-32 T 12-10-2018 IPR012543 Protein of unknown function DUF1694 Amet_0356 f177278b408de9b092893343e7f58c7c 183 Gene3D G3DSA:3.30.1330.30 2 124 5.9E-29 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Amet_2027 7fe6f9762aee87581236c6a11e007a3c 261 SUPERFAMILY SSF51717 4 260 8.24E-71 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2027 7fe6f9762aee87581236c6a11e007a3c 261 Gene3D G3DSA:3.20.20.20 1 261 3.0E-79 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2027 7fe6f9762aee87581236c6a11e007a3c 261 Pfam PF00809 Pterin binding enzyme 23 232 2.1E-32 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_1293 c0fb0856b79eb292b801f0fbf77886f7 538 Gene3D G3DSA:3.40.50.720 17 315 7.6E-75 T 12-10-2018 Amet_1293 c0fb0856b79eb292b801f0fbf77886f7 538 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 239 506 5.9E-30 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Amet_1293 c0fb0856b79eb292b801f0fbf77886f7 538 SUPERFAMILY SSF51735 10 316 6.69E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1293 c0fb0856b79eb292b801f0fbf77886f7 538 SUPERFAMILY SSF48179 320 536 9.86E-37 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_1293 c0fb0856b79eb292b801f0fbf77886f7 538 Gene3D G3DSA:1.10.1040.10 319 538 9.9E-56 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amet_1293 c0fb0856b79eb292b801f0fbf77886f7 538 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 39 202 1.1E-13 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Amet_3841 43e2145a481b0d0c0fe0566e377c5187 305 Pfam PF01633 Choline/ethanolamine kinase 43 241 2.1E-23 T 12-10-2018 Amet_3841 43e2145a481b0d0c0fe0566e377c5187 305 SUPERFAMILY SSF56112 22 290 3.94E-43 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Amet_3841 43e2145a481b0d0c0fe0566e377c5187 305 Gene3D G3DSA:3.90.1200.10 99 296 2.0E-54 T 12-10-2018 Amet_3841 43e2145a481b0d0c0fe0566e377c5187 305 Gene3D G3DSA:3.30.200.20 1 95 5.2E-28 T 12-10-2018 Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 359 3.0E-142 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 11 30 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 Gene3D G3DSA:2.160.10.10 274 371 2.6E-24 T 12-10-2018 Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 Gene3D G3DSA:3.90.550.10 1 273 2.5E-92 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 189 199 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 SUPERFAMILY SSF51161 284 363 1.47E-14 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 2 367 47.483 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 Pfam PF00483 Nucleotidyl transferase 7 259 1.3E-69 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amet_2948 9b6dbc17124d126ab22901a92bc7a033 371 SUPERFAMILY SSF53448 3 337 2.12E-85 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_1917 03bd788d532c50f7a9c29da78982eb28 224 SUPERFAMILY SSF52172 1 178 8.54E-42 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1917 03bd788d532c50f7a9c29da78982eb28 224 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1917 03bd788d532c50f7a9c29da78982eb28 224 Gene3D G3DSA:3.40.50.2300 1 126 1.5E-37 T 12-10-2018 Amet_1917 03bd788d532c50f7a9c29da78982eb28 224 SMART SM00448 2 113 1.6E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1917 03bd788d532c50f7a9c29da78982eb28 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 7.5E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1917 03bd788d532c50f7a9c29da78982eb28 224 Gene3D G3DSA:1.10.10.10 127 224 9.1E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1917 03bd788d532c50f7a9c29da78982eb28 224 SMART SM00862 146 220 2.4E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_4621 d13f82ddee2e9cca6df504b11dc13c79 250 Gene3D G3DSA:3.40.50.300 1 246 1.6E-63 T 12-10-2018 Amet_4621 d13f82ddee2e9cca6df504b11dc13c79 250 SUPERFAMILY SSF52540 4 234 3.7E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4621 d13f82ddee2e9cca6df504b11dc13c79 250 SMART SM00382 28 221 5.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4621 d13f82ddee2e9cca6df504b11dc13c79 250 Pfam PF00005 ABC transporter 19 175 2.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4621 d13f82ddee2e9cca6df504b11dc13c79 250 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4621 d13f82ddee2e9cca6df504b11dc13c79 250 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 250 2.3E-129 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Amet_3575 959c5ccb7342f87160e823a33b53fdd8 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 76 4.2E-19 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amet_3575 959c5ccb7342f87160e823a33b53fdd8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 57 77 1.8E-11 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amet_3575 959c5ccb7342f87160e823a33b53fdd8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.8E-11 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amet_3575 959c5ccb7342f87160e823a33b53fdd8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.8E-11 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amet_3575 959c5ccb7342f87160e823a33b53fdd8 77 Pfam PF03840 Preprotein translocase SecG subunit 4 75 1.2E-21 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Amet_0507 d356fb14b463e2d8b933177e5e7656d4 258 Pfam PF04055 Radical SAM superfamily 30 188 6.7E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_0507 d356fb14b463e2d8b933177e5e7656d4 258 Pfam PF13353 4Fe-4S single cluster domain 22 161 5.5E-16 T 12-10-2018 Amet_0507 d356fb14b463e2d8b933177e5e7656d4 258 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Amet_0507 d356fb14b463e2d8b933177e5e7656d4 258 SUPERFAMILY SSF102114 33 221 1.23E-24 T 12-10-2018 Amet_0507 d356fb14b463e2d8b933177e5e7656d4 258 Gene3D G3DSA:3.20.20.70 7 255 3.0E-88 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0507 d356fb14b463e2d8b933177e5e7656d4 258 PIRSF PIRSF000371 53 258 9.2E-59 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Amet_0507 d356fb14b463e2d8b933177e5e7656d4 258 PIRSF PIRSF000371 1 59 1.2E-24 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Amet_0507 d356fb14b463e2d8b933177e5e7656d4 258 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 60 244 2.2E-63 T 12-10-2018 Amet_0684 64512ff85dfe35b0f7434bb8ee36b6cc 413 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 410 9.0E-98 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Amet_0684 64512ff85dfe35b0f7434bb8ee36b6cc 413 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 334 354 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Amet_0684 64512ff85dfe35b0f7434bb8ee36b6cc 413 Pfam PF00860 Permease family 29 385 1.3E-82 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Amet_4718 f0953031b243c6865c3fc85915ba7d74 251 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4718 f0953031b243c6865c3fc85915ba7d74 251 Gene3D G3DSA:3.40.50.300 1 251 3.1E-73 T 12-10-2018 Amet_4718 f0953031b243c6865c3fc85915ba7d74 251 SUPERFAMILY SSF52540 1 235 1.59E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4718 f0953031b243c6865c3fc85915ba7d74 251 Pfam PF00005 ABC transporter 26 171 5.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4718 f0953031b243c6865c3fc85915ba7d74 251 SMART SM00382 35 220 2.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2480 ffa86dc953a5bc546e9e0d2ec179b289 117 Gene3D G3DSA:1.20.140.160 1 115 2.3E-16 T 12-10-2018 Amet_2480 ffa86dc953a5bc546e9e0d2ec179b289 117 PRINTS PR00046 Major sigma-70 factor signature 98 109 5.2E-8 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2480 ffa86dc953a5bc546e9e0d2ec179b289 117 PRINTS PR00046 Major sigma-70 factor signature 83 98 5.2E-8 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2480 ffa86dc953a5bc546e9e0d2ec179b289 117 PRINTS PR00046 Major sigma-70 factor signature 62 74 5.2E-8 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_2480 ffa86dc953a5bc546e9e0d2ec179b289 117 PIRSF PIRSF002134 44 117 9.5E-4 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2480 ffa86dc953a5bc546e9e0d2ec179b289 117 Pfam PF04545 Sigma-70, region 4 61 110 9.1E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Amet_2480 ffa86dc953a5bc546e9e0d2ec179b289 117 SUPERFAMILY SSF88659 22 115 2.4E-19 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2480 ffa86dc953a5bc546e9e0d2ec179b289 117 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 112 9.9E-15 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_2480 ffa86dc953a5bc546e9e0d2ec179b289 117 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 83 109 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 41.769 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 4.3E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 4.3E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 4.3E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 4.3E-22 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 Gene3D G3DSA:3.90.230.10 1 247 1.4E-104 T 12-10-2018 Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 SUPERFAMILY SSF55920 1 246 2.75E-89 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 246 1.3E-100 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Amet_4456 e5b5158f3945d5efdb079f09999ee67a 248 Pfam PF00557 Metallopeptidase family M24 12 239 2.9E-54 T 12-10-2018 IPR000994 Peptidase M24 Amet_3659 1d656ca39903a1d504647cf47f32480b 241 SMART SM00382 26 213 2.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3659 1d656ca39903a1d504647cf47f32480b 241 Pfam PF00005 ABC transporter 17 165 5.0E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3659 1d656ca39903a1d504647cf47f32480b 241 Gene3D G3DSA:3.40.50.300 1 240 7.6E-77 T 12-10-2018 Amet_3659 1d656ca39903a1d504647cf47f32480b 241 PIRSF PIRSF039085 1 241 1.7E-123 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Amet_3659 1d656ca39903a1d504647cf47f32480b 241 SUPERFAMILY SSF52540 1 235 6.36E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3659 1d656ca39903a1d504647cf47f32480b 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2906 df6fb6e098c132ff252cd2ffa35b2d0c 327 SMART SM00382 36 242 5.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2906 df6fb6e098c132ff252cd2ffa35b2d0c 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 5.6E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2906 df6fb6e098c132ff252cd2ffa35b2d0c 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 319 5.2E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2906 df6fb6e098c132ff252cd2ffa35b2d0c 327 Gene3D G3DSA:3.40.50.300 4 324 2.6E-102 T 12-10-2018 Amet_2906 df6fb6e098c132ff252cd2ffa35b2d0c 327 Pfam PF00005 ABC transporter 28 184 3.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2906 df6fb6e098c132ff252cd2ffa35b2d0c 327 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2906 df6fb6e098c132ff252cd2ffa35b2d0c 327 SUPERFAMILY SSF52540 36 314 7.06E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2474 642eca4d89670c908f5c1e962063b48b 149 Pfam PF04542 Sigma-70 region 2 56 117 2.1E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2474 642eca4d89670c908f5c1e962063b48b 149 Gene3D G3DSA:1.20.120.1810 22 120 5.6E-22 T 12-10-2018 Amet_2474 642eca4d89670c908f5c1e962063b48b 149 SUPERFAMILY SSF88946 20 117 9.16E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_2474 642eca4d89670c908f5c1e962063b48b 149 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 80 93 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Amet_3648 81a9b4343c0cd808474a35292c4a9860 118 Pfam PF11009 Protein of unknown function (DUF2847) 6 108 2.0E-27 T 12-10-2018 IPR022551 Protein of unknown function DUF2847 Amet_3648 81a9b4343c0cd808474a35292c4a9860 118 Gene3D G3DSA:3.40.30.10 1 112 2.8E-23 T 12-10-2018 Amet_3648 81a9b4343c0cd808474a35292c4a9860 118 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 6 108 9.5E-23 T 12-10-2018 IPR022551 Protein of unknown function DUF2847 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SUPERFAMILY SSF52058 63 274 1.11E-47 T 12-10-2018 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00369 146 169 45.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00369 190 211 26.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00369 234 259 31.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00369 212 233 2.6 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 Pfam PF12799 Leucine Rich repeats (2 copies) 63 99 3.2E-6 T 12-10-2018 IPR025875 Leucine rich repeat 4 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 Pfam PF12799 Leucine Rich repeats (2 copies) 191 233 2.1E-10 T 12-10-2018 IPR025875 Leucine rich repeat 4 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 Gene3D G3DSA:3.80.10.10 25 171 1.0E-32 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00365 234 255 90.0 T 12-10-2018 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00365 57 79 570.0 T 12-10-2018 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00365 168 189 73.0 T 12-10-2018 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00365 102 123 180.0 T 12-10-2018 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00365 190 211 18.0 T 12-10-2018 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00365 212 230 12.0 T 12-10-2018 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00365 80 98 86.0 T 12-10-2018 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 SMART SM00365 124 148 38.0 T 12-10-2018 Amet_1998 c4a954c7f38b19332e8794999236f8b9 356 Gene3D G3DSA:3.80.10.10 172 289 1.5E-27 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily Amet_4094 f7b03f7ecd17da92c0f6a90d8ebfc0ec 451 Pfam PF13416 Bacterial extracellular solute-binding protein 76 383 4.8E-24 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein Amet_4094 f7b03f7ecd17da92c0f6a90d8ebfc0ec 451 SUPERFAMILY SSF53850 52 443 2.6E-56 T 12-10-2018 Amet_4094 f7b03f7ecd17da92c0f6a90d8ebfc0ec 451 Gene3D G3DSA:3.40.190.10 75 405 5.8E-65 T 12-10-2018 Amet_4094 f7b03f7ecd17da92c0f6a90d8ebfc0ec 451 Gene3D G3DSA:3.40.190.10 167 442 5.8E-65 T 12-10-2018 Amet_0934 ec196e2642f5494405c0f27b5bad90e7 101 Gene3D G3DSA:1.10.1270.10 1 101 3.3E-39 T 12-10-2018 IPR038116 TrpR-like superfamily Amet_0934 ec196e2642f5494405c0f27b5bad90e7 101 SUPERFAMILY SSF48295 5 95 7.85E-30 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Amet_0934 ec196e2642f5494405c0f27b5bad90e7 101 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 8 95 1.6E-44 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD Amet_0934 ec196e2642f5494405c0f27b5bad90e7 101 Pfam PF01371 Trp repressor protein 13 95 1.2E-31 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 Amet_0934 ec196e2642f5494405c0f27b5bad90e7 101 PIRSF PIRSF012508 1 101 2.4E-48 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD Amet_2275 4abb41b3ba5b46d336dbc41f44061627 118 Gene3D G3DSA:3.40.1390.20 2 105 6.0E-6 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Amet_2275 4abb41b3ba5b46d336dbc41f44061627 118 SUPERFAMILY SSF75138 1 106 6.41E-22 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Amet_2275 4abb41b3ba5b46d336dbc41f44061627 118 Pfam PF07085 DRTGG domain 5 102 4.1E-9 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Amet_2532 5367858bd3061164b297ce706601ecb2 190 SUPERFAMILY SSF46785 5 80 2.18E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2532 5367858bd3061164b297ce706601ecb2 190 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 179 29.611 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Amet_2532 5367858bd3061164b297ce706601ecb2 190 PIRSF PIRSF019345 1 188 2.3E-57 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Amet_2532 5367858bd3061164b297ce706601ecb2 190 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 174 3.5E-49 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Amet_2532 5367858bd3061164b297ce706601ecb2 190 SUPERFAMILY SSF46785 84 158 2.94E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2532 5367858bd3061164b297ce706601ecb2 190 Gene3D G3DSA:1.10.10.10 83 179 4.1E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2532 5367858bd3061164b297ce706601ecb2 190 Gene3D G3DSA:1.10.10.10 2 82 8.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2532 5367858bd3061164b297ce706601ecb2 190 Pfam PF04079 Segregation and condensation complex subunit ScpB 8 167 4.4E-59 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Amet_4333 4e085e90f5a6a046cbf2cfb34b1c4dd6 126 Pfam PF14276 Domain of unknown function (DUF4363) 6 125 2.7E-35 T 12-10-2018 IPR025373 Protein of unknown function DUF4363 Amet_4091 3edb55685ab31a100ebca62bf8293fab 429 Hamap MF_00973 Gluconeogenesis factor. 84 404 33.181 T 12-10-2018 IPR010119 Gluconeogenesis factor Amet_4091 3edb55685ab31a100ebca62bf8293fab 429 Pfam PF01933 Uncharacterised protein family UPF0052 88 379 1.2E-98 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Amet_4091 3edb55685ab31a100ebca62bf8293fab 429 SUPERFAMILY SSF142338 84 399 9.81E-95 T 12-10-2018 Amet_4091 3edb55685ab31a100ebca62bf8293fab 429 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 88 400 4.0E-110 T 12-10-2018 IPR010119 Gluconeogenesis factor Amet_4091 3edb55685ab31a100ebca62bf8293fab 429 Gene3D G3DSA:3.40.50.12300 83 413 6.8E-119 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 Pfam PF01471 Putative peptidoglycan binding domain 379 434 2.7E-9 T 12-10-2018 IPR002477 Peptidoglycan binding-like Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 Gene3D G3DSA:1.10.101.10 366 437 4.3E-14 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 SUPERFAMILY SSF50156 73 189 7.85E-22 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 Gene3D G3DSA:3.90.226.10 183 350 3.3E-82 T 12-10-2018 Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 57 354 2.2E-89 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 SUPERFAMILY SSF52096 22 357 1.11E-63 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 SMART SM00228 95 166 2.3E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 SMART SM00245 168 353 1.3E-55 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 Gene3D G3DSA:3.30.750.44 60 328 3.3E-82 T 12-10-2018 Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 Pfam PF13180 PDZ domain 95 171 3.7E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 Gene3D G3DSA:2.30.42.10 95 182 3.3E-82 T 12-10-2018 Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 SUPERFAMILY SSF47090 369 438 1.48E-12 T 12-10-2018 IPR036365 PGBD-like superfamily Amet_0177 4a203700d90fa65e95b51cb1a034e908 467 Pfam PF03572 Peptidase family S41 192 352 4.3E-51 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Amet_3926 d8f146d63bef8a5ca96893cd01a030a1 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 149 2.0E-11 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_3926 d8f146d63bef8a5ca96893cd01a030a1 212 SUPERFAMILY SSF51161 44 201 4.02E-47 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_3926 d8f146d63bef8a5ca96893cd01a030a1 212 Gene3D G3DSA:2.160.10.10 1 210 3.3E-75 T 12-10-2018 Amet_3926 d8f146d63bef8a5ca96893cd01a030a1 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Amet_4228 cbdd5fe7085f1dac0c5825a981e4ac71 233 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 45.7 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Amet_4228 cbdd5fe7085f1dac0c5825a981e4ac71 233 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 231 6.2E-102 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 Amet_4228 cbdd5fe7085f1dac0c5825a981e4ac71 233 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_4228 cbdd5fe7085f1dac0c5825a981e4ac71 233 SUPERFAMILY SSF53167 2 232 1.31E-91 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Amet_4228 cbdd5fe7085f1dac0c5825a981e4ac71 233 Gene3D G3DSA:3.40.50.1580 2 232 1.4E-73 T 12-10-2018 Amet_4228 cbdd5fe7085f1dac0c5825a981e4ac71 233 Pfam PF01048 Phosphorylase superfamily 16 219 1.7E-42 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Amet_1083 2b1e9a3d052a1af89eb2c9c3a4963663 266 Gene3D G3DSA:3.20.20.70 2 264 6.2E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1083 2b1e9a3d052a1af89eb2c9c3a4963663 266 Pfam PF00290 Tryptophan synthase alpha chain 10 258 1.7E-93 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amet_1083 2b1e9a3d052a1af89eb2c9c3a4963663 266 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 49 62 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amet_1083 2b1e9a3d052a1af89eb2c9c3a4963663 266 SUPERFAMILY SSF51366 3 246 1.88E-85 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amet_1083 2b1e9a3d052a1af89eb2c9c3a4963663 266 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 13 262 35.862 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amet_1083 2b1e9a3d052a1af89eb2c9c3a4963663 266 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 10 259 2.8E-87 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Amet_3199 2cacf8eeb1a29bd62ba1e5f6cd8b4988 327 Gene3D G3DSA:2.40.10.420 292 326 2.9E-7 T 12-10-2018 Amet_3199 2cacf8eeb1a29bd62ba1e5f6cd8b4988 327 Gene3D G3DSA:3.10.350.10 140 191 2.2E-14 T 12-10-2018 IPR036779 LysM domain superfamily Amet_3199 2cacf8eeb1a29bd62ba1e5f6cd8b4988 327 Pfam PF01476 LysM domain 144 185 1.3E-10 T 12-10-2018 IPR018392 LysM domain Amet_3199 2cacf8eeb1a29bd62ba1e5f6cd8b4988 327 Gene3D G3DSA:1.10.10.2520 207 290 3.2E-28 T 12-10-2018 Amet_3199 2cacf8eeb1a29bd62ba1e5f6cd8b4988 327 SMART SM00257 143 186 1.6E-12 T 12-10-2018 IPR018392 LysM domain Amet_3199 2cacf8eeb1a29bd62ba1e5f6cd8b4988 327 SUPERFAMILY SSF54106 143 185 6.93E-10 T 12-10-2018 Amet_3199 2cacf8eeb1a29bd62ba1e5f6cd8b4988 327 Pfam PF07486 Cell Wall Hydrolase 223 326 7.8E-26 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 Amet_2046 5b022576b59f95068c597ce7f9431ed3 308 Gene3D G3DSA:1.10.3720.10 81 307 1.7E-24 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2046 5b022576b59f95068c597ce7f9431ed3 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 7.3E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2046 5b022576b59f95068c597ce7f9431ed3 308 SUPERFAMILY SSF161098 94 295 1.31E-20 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 PIRSF PIRSF000114 1 332 1.3E-111 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 SUPERFAMILY SSF51735 6 178 6.03E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 322 38.324 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 2.7E-55 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 159 1.0E-54 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 SUPERFAMILY SSF48179 180 331 3.91E-58 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 Gene3D G3DSA:3.40.50.720 1 187 1.4E-66 T 12-10-2018 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 Gene3D G3DSA:1.10.1040.10 189 336 4.0E-54 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 6.7E-45 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 6.7E-45 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 6.7E-45 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 6.7E-45 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 6.7E-45 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_2855 b83d82b9588cb9c0ef4f1185ac48defd 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 6.7E-45 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Amet_0084 2d4e513173a3f051e8fc78d9fb3af1fd 329 Gene3D G3DSA:3.40.50.300 1 163 1.1E-59 T 12-10-2018 Amet_0084 2d4e513173a3f051e8fc78d9fb3af1fd 329 Pfam PF13177 DNA polymerase III, delta subunit 8 165 2.8E-61 T 12-10-2018 Amet_0084 2d4e513173a3f051e8fc78d9fb3af1fd 329 SUPERFAMILY SSF52540 3 204 7.79E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0084 2d4e513173a3f051e8fc78d9fb3af1fd 329 SUPERFAMILY SSF48019 213 322 4.59E-5 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Amet_0084 2d4e513173a3f051e8fc78d9fb3af1fd 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 14 199 5.5E-59 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3497 391bca2c4ce0241c8528be538ea233d0 480 Pfam PF00939 Sodium:sulfate symporter transmembrane region 30 479 6.7E-66 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Amet_3497 391bca2c4ce0241c8528be538ea233d0 480 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 46 474 1.5E-82 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Amet_3497 391bca2c4ce0241c8528be538ea233d0 480 PIRSF PIRSF002457 20 480 2.5E-107 T 12-10-2018 IPR030676 Citrate carrier CitT-related Amet_3298 6f71ddc99b679db94d64f3e26e8fb403 404 Pfam PF13534 4Fe-4S dicluster domain 33 86 1.1E-4 T 12-10-2018 Amet_3298 6f71ddc99b679db94d64f3e26e8fb403 404 Pfam PF02754 Cysteine-rich domain 263 342 1.5E-5 T 12-10-2018 IPR004017 Cysteine-rich domain Amet_3298 6f71ddc99b679db94d64f3e26e8fb403 404 Pfam PF02754 Cysteine-rich domain 148 226 1.2E-5 T 12-10-2018 IPR004017 Cysteine-rich domain Amet_3298 6f71ddc99b679db94d64f3e26e8fb403 404 SUPERFAMILY SSF46548 33 101 2.27E-9 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_3298 6f71ddc99b679db94d64f3e26e8fb403 404 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0812 474d928deb9cd34b08ec3f82f1238178 155 SMART SM00347 27 127 0.005 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_0812 474d928deb9cd34b08ec3f82f1238178 155 Gene3D G3DSA:1.10.10.10 7 152 4.5E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0812 474d928deb9cd34b08ec3f82f1238178 155 SUPERFAMILY SSF46785 31 138 2.86E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2717 3c6e4940516fc99cbb1e8406f80a56f5 129 Pfam PF12611 Putative flagellar 105 128 1.2E-12 T 12-10-2018 IPR013367 Flagellar, putative Amet_2717 3c6e4940516fc99cbb1e8406f80a56f5 129 TIGRFAM TIGR02530 flg_new: flagellar operon protein 33 129 3.7E-34 T 12-10-2018 IPR013367 Flagellar, putative Amet_1812 42404f5c94a0c5047e4411aab2d0a250 382 Pfam PF01551 Peptidase family M23 241 336 5.2E-15 T 12-10-2018 IPR016047 Peptidase M23 Amet_1812 42404f5c94a0c5047e4411aab2d0a250 382 Gene3D G3DSA:2.70.70.10 191 379 2.8E-23 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_1812 42404f5c94a0c5047e4411aab2d0a250 382 SUPERFAMILY SSF51261 240 334 3.71E-17 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_2013 da3a1c835177794ffa9db21b8e24b762 119 Gene3D G3DSA:1.10.10.10 1 86 9.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2013 da3a1c835177794ffa9db21b8e24b762 119 SUPERFAMILY SSF46785 5 92 3.8E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2013 da3a1c835177794ffa9db21b8e24b762 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.1E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_2013 da3a1c835177794ffa9db21b8e24b762 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 2.1E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_2013 da3a1c835177794ffa9db21b8e24b762 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 2.1E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_2013 da3a1c835177794ffa9db21b8e24b762 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 26 37 2.1E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_2013 da3a1c835177794ffa9db21b8e24b762 119 SMART SM00418 5 83 3.9E-24 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_2013 da3a1c835177794ffa9db21b8e24b762 119 Pfam PF01022 Bacterial regulatory protein, arsR family 14 56 8.9E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 Pfam PF00994 Probable molybdopterin binding domain 189 325 1.9E-26 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 175 8.4E-41 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 Gene3D G3DSA:2.40.340.10 339 409 1.2E-18 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 Gene3D G3DSA:3.40.980.10 183 325 1.5E-97 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 Gene3D G3DSA:2.170.190.11 52 149 1.5E-97 T 12-10-2018 Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 SUPERFAMILY SSF63882 8 182 1.3E-49 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 Gene3D G3DSA:3.90.105.10 29 182 1.5E-97 T 12-10-2018 Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 SMART SM00852 188 327 3.8E-36 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 SUPERFAMILY SSF63867 336 409 7.33E-15 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 Pfam PF03454 MoeA C-terminal region (domain IV) 343 409 5.0E-14 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 185 323 2.2E-31 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_3169 dd1a8b01291af68262c4aa6e0ce5dd4c 409 SUPERFAMILY SSF53218 185 331 3.53E-37 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_2501 e05654995df27d3f36311b2c8ae7e05d 129 Pfam PF01029 NusB family 1 119 1.5E-33 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Amet_2501 e05654995df27d3f36311b2c8ae7e05d 129 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 1 120 1.9E-36 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 Amet_2501 e05654995df27d3f36311b2c8ae7e05d 129 Gene3D G3DSA:1.10.940.10 1 127 2.0E-38 T 12-10-2018 IPR035926 NusB-like superfamily Amet_2501 e05654995df27d3f36311b2c8ae7e05d 129 SUPERFAMILY SSF48013 2 121 2.88E-32 T 12-10-2018 IPR035926 NusB-like superfamily Amet_2501 e05654995df27d3f36311b2c8ae7e05d 129 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 123 17.031 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 Amet_3622 ab8c2198e1f6d674ea8bb8835de1a5dd 180 Gene3D G3DSA:3.40.50.300 1 180 8.5E-62 T 12-10-2018 Amet_3622 ab8c2198e1f6d674ea8bb8835de1a5dd 180 SUPERFAMILY SSF52540 5 179 4.79E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3622 ab8c2198e1f6d674ea8bb8835de1a5dd 180 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 6 179 6.0E-59 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Amet_3622 ab8c2198e1f6d674ea8bb8835de1a5dd 180 PIRSF PIRSF015617 1 180 1.2E-57 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Amet_0617 d58722ce3c7ea2a50c394e2e61e847b1 273 Gene3D G3DSA:1.10.1660.10 8 137 1.5E-26 T 12-10-2018 Amet_0617 d58722ce3c7ea2a50c394e2e61e847b1 273 SMART SM00422 9 78 7.7E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_0617 d58722ce3c7ea2a50c394e2e61e847b1 273 SUPERFAMILY SSF55136 128 271 2.09E-16 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amet_0617 d58722ce3c7ea2a50c394e2e61e847b1 273 ProSitePatterns PS00552 MerR-type HTH domain signature. 12 34 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_0617 d58722ce3c7ea2a50c394e2e61e847b1 273 Pfam PF13411 MerR HTH family regulatory protein 9 77 3.5E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_0617 d58722ce3c7ea2a50c394e2e61e847b1 273 Pfam PF06445 GyrI-like small molecule binding domain 135 254 7.0E-7 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain Amet_0617 d58722ce3c7ea2a50c394e2e61e847b1 273 SUPERFAMILY SSF46955 9 118 1.28E-22 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_2517 457f33af847ba4c8268b68271d597cdf 298 Pfam PF11382 Copper transport outer membrane protein, MctB 1 291 7.1E-60 T 12-10-2018 IPR021522 Copper transporter MctB GO:0016020|GO:0055070 Amet_0930 ddee093d07481c662ebc3e9ecf39effd 276 Gene3D G3DSA:3.40.190.10 122 226 2.7E-98 T 12-10-2018 Amet_0930 ddee093d07481c662ebc3e9ecf39effd 276 PIRSF PIRSF002854 1 276 1.3E-104 T 12-10-2018 IPR004872 Lipoprotein NlpA family Amet_0930 ddee093d07481c662ebc3e9ecf39effd 276 SUPERFAMILY SSF53850 40 276 1.56E-83 T 12-10-2018 Amet_0930 ddee093d07481c662ebc3e9ecf39effd 276 Gene3D G3DSA:3.40.190.10 41 273 2.7E-98 T 12-10-2018 Amet_0930 ddee093d07481c662ebc3e9ecf39effd 276 Pfam PF03180 NLPA lipoprotein 41 276 1.7E-92 T 12-10-2018 IPR004872 Lipoprotein NlpA family Amet_1660 155e4e72f7328c11e025b1e846ce78b3 190 SUPERFAMILY SSF53323 3 189 5.62E-34 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_1660 155e4e72f7328c11e025b1e846ce78b3 190 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 188 4.4E-35 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amet_1660 155e4e72f7328c11e025b1e846ce78b3 190 Gene3D G3DSA:3.40.920.10 2 190 1.4E-47 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_0318 0fcc72cbd8d3cbfd9c07090f163fd8d0 270 Gene3D G3DSA:3.20.20.70 1 270 1.1E-117 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0318 0fcc72cbd8d3cbfd9c07090f163fd8d0 270 Pfam PF05853 beta-keto acid cleavage enzyme 3 269 2.7E-111 T 12-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 Amet_3893 6de3e2527a72684e0c577b19ffb27af5 225 Gene3D G3DSA:1.10.3720.10 14 224 4.5E-43 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3893 6de3e2527a72684e0c577b19ffb27af5 225 SUPERFAMILY SSF161098 16 210 4.32E-43 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3893 6de3e2527a72684e0c577b19ffb27af5 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 224 5.9E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2170 c3e72a771ab89df4e20fe67ea72ff298 477 Gene3D G3DSA:3.30.479.30 73 189 1.1E-29 T 12-10-2018 Amet_2170 c3e72a771ab89df4e20fe67ea72ff298 477 SMART SM00244 26 199 2.9E-4 T 12-10-2018 IPR001107 Band 7 domain Amet_2170 c3e72a771ab89df4e20fe67ea72ff298 477 SUPERFAMILY SSF117892 64 203 1.44E-32 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Amet_2170 c3e72a771ab89df4e20fe67ea72ff298 477 Pfam PF01145 SPFH domain / Band 7 family 33 215 8.2E-21 T 12-10-2018 IPR001107 Band 7 domain Amet_2170 c3e72a771ab89df4e20fe67ea72ff298 477 Pfam PF15975 Flotillin 336 444 9.5E-9 T 12-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 Amet_1430 4cd3b3a3dda4e189f18368b56fc5814e 271 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 228 239 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_1430 4cd3b3a3dda4e189f18368b56fc5814e 271 SUPERFAMILY SSF52218 5 127 6.42E-18 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1430 4cd3b3a3dda4e189f18368b56fc5814e 271 SUPERFAMILY SSF54862 191 261 3.35E-9 T 12-10-2018 Amet_1430 4cd3b3a3dda4e189f18368b56fc5814e 271 Gene3D G3DSA:3.30.70.20 180 270 7.6E-7 T 12-10-2018 Amet_1430 4cd3b3a3dda4e189f18368b56fc5814e 271 Gene3D G3DSA:3.40.50.360 1 167 4.7E-14 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_3291 67d70ba44c437af8cfc492355f5b55c5 256 Pfam PF00581 Rhodanese-like domain 13 117 3.0E-10 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3291 67d70ba44c437af8cfc492355f5b55c5 256 Pfam PF00581 Rhodanese-like domain 153 252 8.5E-16 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3291 67d70ba44c437af8cfc492355f5b55c5 256 Gene3D G3DSA:3.40.250.10 132 256 2.5E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_3291 67d70ba44c437af8cfc492355f5b55c5 256 SUPERFAMILY SSF52821 132 256 4.85E-22 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_3291 67d70ba44c437af8cfc492355f5b55c5 256 SMART SM00450 12 127 3.9E-10 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3291 67d70ba44c437af8cfc492355f5b55c5 256 SMART SM00450 139 256 6.2E-6 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3291 67d70ba44c437af8cfc492355f5b55c5 256 Gene3D G3DSA:3.40.250.10 8 123 4.2E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_3291 67d70ba44c437af8cfc492355f5b55c5 256 SUPERFAMILY SSF52821 10 131 2.23E-20 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_2522 6184f5dc81dc93779acf69c0be579ab1 211 PIRSF PIRSF038973 1 211 6.1E-82 T 12-10-2018 IPR014196 Stage II sporulation protein M Amet_2522 6184f5dc81dc93779acf69c0be579ab1 211 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 10 205 1.2E-54 T 12-10-2018 IPR014196 Stage II sporulation protein M Amet_2522 6184f5dc81dc93779acf69c0be579ab1 211 Pfam PF01944 Stage II sporulation protein M 25 201 7.9E-24 T 12-10-2018 IPR002798 Stage II sporulation protein M-like Amet_2327 a6bbd9fe39d3baea95d682ecf049408e 285 Pfam PF10646 Sporulation and spore germination 44 154 1.7E-21 T 12-10-2018 IPR019606 GerMN domain Amet_2327 a6bbd9fe39d3baea95d682ecf049408e 285 SMART SM00909 70 158 2.4E-24 T 12-10-2018 IPR019606 GerMN domain Amet_1612 55e5e9f0380f67b26eed44055371e9c2 406 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Amet_1612 55e5e9f0380f67b26eed44055371e9c2 406 Pfam PF00872 Transposase, Mutator family 10 380 4.0E-115 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Amet_3842 b0ec788ff275d446ae7b8d8bda288e05 384 SUPERFAMILY SSF56796 17 380 1.57E-104 T 12-10-2018 Amet_3842 b0ec788ff275d446ae7b8d8bda288e05 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 161 189 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Amet_3842 b0ec788ff275d446ae7b8d8bda288e05 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 372 2.5E-106 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Amet_3842 b0ec788ff275d446ae7b8d8bda288e05 384 Gene3D G3DSA:3.40.50.1970 1 172 5.2E-41 T 12-10-2018 Amet_3842 b0ec788ff275d446ae7b8d8bda288e05 384 Gene3D G3DSA:1.20.1090.10 173 381 1.0E-64 T 12-10-2018 Amet_2797 c7671011039452fd36dd17676094cbda 147 Pfam PF01252 Signal peptidase (SPase) II 9 140 1.7E-37 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amet_2797 c7671011039452fd36dd17676094cbda 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 46 54 1.5E-15 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amet_2797 c7671011039452fd36dd17676094cbda 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 122 138 1.5E-15 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amet_2797 c7671011039452fd36dd17676094cbda 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 90 105 1.5E-15 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amet_2797 c7671011039452fd36dd17676094cbda 147 ProSitePatterns PS00855 Signal peptidases II signature. 93 105 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amet_2797 c7671011039452fd36dd17676094cbda 147 TIGRFAM TIGR00077 lspA: signal peptidase II 4 136 2.8E-33 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amet_2797 c7671011039452fd36dd17676094cbda 147 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 147 16.47 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 Gene3D G3DSA:3.40.1830.10 1 180 1.9E-68 T 12-10-2018 IPR035097 Peptidase M29, N-terminal Amet_4253 b193b75736f6e680effd48eda1144b2f 410 SUPERFAMILY SSF144052 4 410 4.45E-144 T 12-10-2018 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 2.0E-171 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 4.8E-74 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 4.8E-74 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 4.8E-74 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 4.8E-74 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 4.8E-74 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 4.8E-74 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 4.8E-74 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_4253 b193b75736f6e680effd48eda1144b2f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 4.8E-74 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Amet_1537 48358397825cfb1525826e70fd638a21 444 Pfam PF13546 DDE superfamily endonuclease 46 252 1.5E-13 T 12-10-2018 IPR038721 Transposase IS701-like, DDE domain Amet_1537 48358397825cfb1525826e70fd638a21 444 SUPERFAMILY SSF53098 88 402 8.34E-12 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1345 4a59f6066d9df553f4f49d767dc87c7f 443 Gene3D G3DSA:3.40.640.10 50 308 5.7E-112 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_1345 4a59f6066d9df553f4f49d767dc87c7f 443 Gene3D G3DSA:3.90.1150.10 30 422 5.7E-112 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_1345 4a59f6066d9df553f4f49d767dc87c7f 443 Pfam PF00266 Aminotransferase class-V 32 421 2.4E-88 T 12-10-2018 IPR000192 Aminotransferase class V domain Amet_1345 4a59f6066d9df553f4f49d767dc87c7f 443 SUPERFAMILY SSF53383 24 429 3.52E-94 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3327 7c8eaa3f8f5e0402805537eb7217ec90 338 SUPERFAMILY SSF52540 6 260 3.38E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3327 7c8eaa3f8f5e0402805537eb7217ec90 338 SMART SM00382 45 247 8.0E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3327 7c8eaa3f8f5e0402805537eb7217ec90 338 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3327 7c8eaa3f8f5e0402805537eb7217ec90 338 Gene3D G3DSA:3.40.50.300 4 336 1.2E-97 T 12-10-2018 Amet_3327 7c8eaa3f8f5e0402805537eb7217ec90 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 2.2E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_3327 7c8eaa3f8f5e0402805537eb7217ec90 338 Pfam PF00005 ABC transporter 37 189 1.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3327 7c8eaa3f8f5e0402805537eb7217ec90 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 325 7.5E-25 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_3090 b41ec57798041517ecf693bc43c8c86f 261 SUPERFAMILY SSF52402 1 256 8.37E-80 T 12-10-2018 Amet_3090 b41ec57798041517ecf693bc43c8c86f 261 Pfam PF01012 Electron transfer flavoprotein domain 23 207 1.3E-49 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_3090 b41ec57798041517ecf693bc43c8c86f 261 SMART SM00893 22 212 4.0E-64 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_3090 b41ec57798041517ecf693bc43c8c86f 261 PIRSF PIRSF000090 1 261 8.4E-93 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Amet_3090 b41ec57798041517ecf693bc43c8c86f 261 Gene3D G3DSA:3.40.50.620 1 261 4.8E-95 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3090 b41ec57798041517ecf693bc43c8c86f 261 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Amet_2278 97704fc14ff64229701dd16871183c60 244 Pfam PF02811 PHP domain 6 94 9.4E-9 T 12-10-2018 IPR004013 PHP domain GO:0003824 Amet_2278 97704fc14ff64229701dd16871183c60 244 SUPERFAMILY SSF89550 3 238 3.66E-37 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amet_2278 97704fc14ff64229701dd16871183c60 244 SMART SM00481 5 73 8.2E-9 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Amet_0979 c7056d170bdbc1cd3e6fa0b8cce7b3b3 305 SUPERFAMILY SSF53850 88 299 2.4E-36 T 12-10-2018 Amet_0979 c7056d170bdbc1cd3e6fa0b8cce7b3b3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_0979 c7056d170bdbc1cd3e6fa0b8cce7b3b3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_0979 c7056d170bdbc1cd3e6fa0b8cce7b3b3 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_0979 c7056d170bdbc1cd3e6fa0b8cce7b3b3 305 Gene3D G3DSA:1.10.10.10 1 88 2.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0979 c7056d170bdbc1cd3e6fa0b8cce7b3b3 305 Pfam PF03466 LysR substrate binding domain 87 293 2.6E-38 T 12-10-2018 IPR005119 LysR, substrate-binding Amet_0979 c7056d170bdbc1cd3e6fa0b8cce7b3b3 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.7E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Amet_0979 c7056d170bdbc1cd3e6fa0b8cce7b3b3 305 Gene3D G3DSA:3.40.190.290 91 302 4.5E-37 T 12-10-2018 Amet_0979 c7056d170bdbc1cd3e6fa0b8cce7b3b3 305 SUPERFAMILY SSF46785 1 86 3.63E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 Gene3D G3DSA:2.60.410.10 293 379 1.6E-11 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 SMART SM00936 289 380 1.9E-14 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 289 379 3.3E-9 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 SUPERFAMILY SSF69189 281 379 4.9E-13 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 147 6.7E-11 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 6.7E-11 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 6.7E-11 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 SUPERFAMILY SSF56601 2 289 6.34E-68 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 270 3.8E-51 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Amet_2319 a771ed3bc90cc7ab10e4a7cf5367e0e6 441 Gene3D G3DSA:3.40.710.10 23 292 1.2E-80 T 12-10-2018 Amet_3419 acdf5796365eea2b26cf59652bb03658 100 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 13 76 1.0E-31 T 12-10-2018 Amet_3419 acdf5796365eea2b26cf59652bb03658 100 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 8 77 9.0E-20 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Amet_3419 acdf5796365eea2b26cf59652bb03658 100 SUPERFAMILY SSF55021 7 77 1.19E-16 T 12-10-2018 Amet_3419 acdf5796365eea2b26cf59652bb03658 100 Gene3D G3DSA:3.30.70.260 2 94 3.7E-29 T 12-10-2018 Amet_3419 acdf5796365eea2b26cf59652bb03658 100 Pfam PF13710 ACT domain 16 76 1.6E-11 T 12-10-2018 Amet_4794 0c51d13aa9dc63926356d5dd114ff360 270 Gene3D G3DSA:1.10.10.2830 87 201 1.7E-34 T 12-10-2018 Amet_4794 0c51d13aa9dc63926356d5dd114ff360 270 SMART SM00470 9 100 1.0E-29 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_4794 0c51d13aa9dc63926356d5dd114ff360 270 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 5 184 1.5E-50 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Amet_4794 0c51d13aa9dc63926356d5dd114ff360 270 SUPERFAMILY SSF109709 93 202 3.92E-30 T 12-10-2018 Amet_4794 0c51d13aa9dc63926356d5dd114ff360 270 SUPERFAMILY SSF110849 9 102 2.12E-25 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Amet_4794 0c51d13aa9dc63926356d5dd114ff360 270 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 8 266 9.4E-96 T 12-10-2018 IPR023705 Nucleoid occlusion protein Amet_4794 0c51d13aa9dc63926356d5dd114ff360 270 Pfam PF02195 ParB-like nuclease domain 10 99 1.0E-23 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_4794 0c51d13aa9dc63926356d5dd114ff360 270 Gene3D G3DSA:3.90.1530.30 22 84 6.7E-25 T 12-10-2018 Amet_2669 98e7fc963eec4e2037a8ea5ec6ca3bb2 307 SUPERFAMILY SSF82114 173 306 4.36E-39 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Amet_2669 98e7fc963eec4e2037a8ea5ec6ca3bb2 307 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 2.9E-76 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Amet_2669 98e7fc963eec4e2037a8ea5ec6ca3bb2 307 Gene3D G3DSA:2.40.30.30 185 307 3.7E-38 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Amet_2669 98e7fc963eec4e2037a8ea5ec6ca3bb2 307 SMART SM00904 182 306 5.4E-47 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Amet_2669 98e7fc963eec4e2037a8ea5ec6ca3bb2 307 SUPERFAMILY SSF52374 16 175 3.56E-31 T 12-10-2018 Amet_2669 98e7fc963eec4e2037a8ea5ec6ca3bb2 307 Pfam PF06574 FAD synthetase 17 165 1.2E-46 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Amet_2669 98e7fc963eec4e2037a8ea5ec6ca3bb2 307 Pfam PF01687 Riboflavin kinase 183 304 5.4E-31 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Amet_2669 98e7fc963eec4e2037a8ea5ec6ca3bb2 307 Gene3D G3DSA:3.40.50.620 1 184 1.5E-55 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_2669 98e7fc963eec4e2037a8ea5ec6ca3bb2 307 PIRSF PIRSF004491 1 307 1.9E-101 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Amet_4538 25875d46536f07962d8cba2662dc3aa1 515 SUPERFAMILY SSF52096 224 514 1.23E-94 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_4538 25875d46536f07962d8cba2662dc3aa1 515 Pfam PF01039 Carboxyl transferase domain 28 513 7.4E-199 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Amet_4538 25875d46536f07962d8cba2662dc3aa1 515 Gene3D G3DSA:3.90.226.10 1 257 7.3E-93 T 12-10-2018 Amet_4538 25875d46536f07962d8cba2662dc3aa1 515 Gene3D G3DSA:3.90.226.10 259 515 5.0E-94 T 12-10-2018 Amet_4538 25875d46536f07962d8cba2662dc3aa1 515 SUPERFAMILY SSF52096 4 254 8.14E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_3554 6801dc934f3d525cc2c3ee0f17dc2737 251 SMART SM00382 31 218 3.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3554 6801dc934f3d525cc2c3ee0f17dc2737 251 Pfam PF00005 ABC transporter 22 170 4.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3554 6801dc934f3d525cc2c3ee0f17dc2737 251 Gene3D G3DSA:3.40.50.300 1 239 3.4E-63 T 12-10-2018 Amet_3554 6801dc934f3d525cc2c3ee0f17dc2737 251 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3554 6801dc934f3d525cc2c3ee0f17dc2737 251 SUPERFAMILY SSF52540 3 223 5.09E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4010 b7e860043c53283a1f82bf76ed10ec94 169 Gene3D G3DSA:3.90.75.20 4 120 6.9E-23 T 12-10-2018 Amet_4010 b7e860043c53283a1f82bf76ed10ec94 169 SUPERFAMILY SSF54060 3 118 1.18E-18 T 12-10-2018 Amet_4010 b7e860043c53283a1f82bf76ed10ec94 169 Pfam PF13392 HNH endonuclease 69 111 2.8E-8 T 12-10-2018 IPR003615 HNH nuclease Amet_4010 b7e860043c53283a1f82bf76ed10ec94 169 Pfam PF07463 NUMOD4 motif 3 62 2.5E-17 T 12-10-2018 IPR010902 NUMOD4 GO:0016788 Amet_3996 00332b3f29239b331504a30f0c82ed45 354 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 11 339 2.6E-116 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Amet_3996 00332b3f29239b331504a30f0c82ed45 354 Pfam PF01758 Sodium Bile acid symporter family 55 252 2.4E-44 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Amet_3996 00332b3f29239b331504a30f0c82ed45 354 PIRSF PIRSF005508 1 354 2.4E-129 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Amet_3996 00332b3f29239b331504a30f0c82ed45 354 Gene3D G3DSA:1.20.1530.20 4 340 3.8E-24 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Amet_0152 5f55516eb731be5bf93dbf1fa73addd2 320 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 81 241 2.7E-31 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amet_0152 5f55516eb731be5bf93dbf1fa73addd2 320 Gene3D G3DSA:1.10.260.150 53 320 7.2E-60 T 12-10-2018 Amet_0152 5f55516eb731be5bf93dbf1fa73addd2 320 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 81 241 5.5E-29 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amet_2505 4d2bdff6ab29ec2651a5520664f15edb 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site Amet_2505 4d2bdff6ab29ec2651a5520664f15edb 295 Gene3D G3DSA:1.10.600.10 6 295 8.4E-97 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amet_2505 4d2bdff6ab29ec2651a5520664f15edb 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site Amet_2505 4d2bdff6ab29ec2651a5520664f15edb 295 Pfam PF00348 Polyprenyl synthetase 32 270 5.6E-60 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Amet_2505 4d2bdff6ab29ec2651a5520664f15edb 295 SUPERFAMILY SSF48576 6 274 3.42E-84 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily Amet_4212 4c72517edb51b020f8b089f28e734460 307 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 4 305 35.582 T 12-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4212 4c72517edb51b020f8b089f28e734460 307 SMART SM00934 15 283 2.0E-28 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4212 4c72517edb51b020f8b089f28e734460 307 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 281 1.9E-82 T 12-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4212 4c72517edb51b020f8b089f28e734460 307 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 56 276 4.5E-25 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4212 4c72517edb51b020f8b089f28e734460 307 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 100 113 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Amet_4212 4c72517edb51b020f8b089f28e734460 307 Gene3D G3DSA:3.20.20.70 1 306 1.2E-104 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_4212 4c72517edb51b020f8b089f28e734460 307 SUPERFAMILY SSF51366 2 286 5.65E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amet_0299 eb71a5248ddd6ec3eec4a0379090ca94 220 SUPERFAMILY SSF48452 36 206 2.85E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0299 eb71a5248ddd6ec3eec4a0379090ca94 220 Pfam PF13181 Tetratricopeptide repeat 174 204 0.12 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0299 eb71a5248ddd6ec3eec4a0379090ca94 220 SMART SM00028 69 102 6.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0299 eb71a5248ddd6ec3eec4a0379090ca94 220 SMART SM00028 103 136 15.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0299 eb71a5248ddd6ec3eec4a0379090ca94 220 SMART SM00028 137 170 80.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0299 eb71a5248ddd6ec3eec4a0379090ca94 220 SMART SM00028 35 68 190.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0299 eb71a5248ddd6ec3eec4a0379090ca94 220 SMART SM00028 172 205 35.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0299 eb71a5248ddd6ec3eec4a0379090ca94 220 Gene3D G3DSA:1.25.40.10 112 220 4.4E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0299 eb71a5248ddd6ec3eec4a0379090ca94 220 Gene3D G3DSA:1.25.40.10 24 111 9.0E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0849 e1acf7c3c2661d379f27e506fc212138 467 Gene3D G3DSA:3.90.220.20 14 226 3.4E-43 T 12-10-2018 Amet_0849 e1acf7c3c2661d379f27e506fc212138 467 Gene3D G3DSA:3.90.220.20 238 441 2.4E-33 T 12-10-2018 Amet_0849 e1acf7c3c2661d379f27e506fc212138 467 Pfam PF01420 Type I restriction modification DNA specificity domain 240 414 7.1E-17 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Amet_0849 e1acf7c3c2661d379f27e506fc212138 467 Pfam PF01420 Type I restriction modification DNA specificity domain 29 199 4.6E-31 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Amet_0849 e1acf7c3c2661d379f27e506fc212138 467 SUPERFAMILY SSF116734 26 234 6.87E-49 T 12-10-2018 Amet_0849 e1acf7c3c2661d379f27e506fc212138 467 SUPERFAMILY SSF116734 240 449 1.96E-33 T 12-10-2018 Amet_3516 033481010b61f3febf866a8b2cd1983b 102 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 5 89 1.1E-7 T 12-10-2018 Amet_3516 033481010b61f3febf866a8b2cd1983b 102 SUPERFAMILY SSF52833 4 101 3.91E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_3516 033481010b61f3febf866a8b2cd1983b 102 Gene3D G3DSA:3.40.30.10 4 102 1.3E-34 T 12-10-2018 Amet_3725 d92c95ba6b8415ae43b60090fe997c10 437 Gene3D G3DSA:1.10.3080.10 15 417 4.5E-55 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Amet_3725 d92c95ba6b8415ae43b60090fe997c10 437 SUPERFAMILY SSF81340 14 410 9.16E-81 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Amet_3725 d92c95ba6b8415ae43b60090fe997c10 437 Pfam PF00654 Voltage gated chloride channel 69 400 1.0E-67 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Amet_1881 9f5c1511367cc8e64e68483f6a370acb 515 Gene3D G3DSA:3.40.190.10 192 498 4.0E-140 T 12-10-2018 Amet_1881 9f5c1511367cc8e64e68483f6a370acb 515 Gene3D G3DSA:3.10.105.10 266 488 4.0E-140 T 12-10-2018 Amet_1881 9f5c1511367cc8e64e68483f6a370acb 515 Gene3D G3DSA:3.90.76.10 42 191 4.0E-140 T 12-10-2018 Amet_1881 9f5c1511367cc8e64e68483f6a370acb 515 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 431 8.3E-100 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_1881 9f5c1511367cc8e64e68483f6a370acb 515 SUPERFAMILY SSF53850 34 513 1.52E-138 T 12-10-2018 Amet_1881 9f5c1511367cc8e64e68483f6a370acb 515 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 102 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site Amet_1881 9f5c1511367cc8e64e68483f6a370acb 515 PIRSF PIRSF002741 1 515 1.0E-118 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_1791 b779a18782b7a4e40dc080b6df2bf299 90 Pfam PF13358 DDE superfamily endonuclease 1 63 6.4E-11 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain Amet_1157 5f7ba0e7130f8d10db483c96f5e61da8 397 SUPERFAMILY SSF51338 2 78 1.8E-12 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_1157 5f7ba0e7130f8d10db483c96f5e61da8 397 Gene3D G3DSA:2.30.40.10 315 388 2.8E-8 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_1157 5f7ba0e7130f8d10db483c96f5e61da8 397 Gene3D G3DSA:3.20.20.140 56 189 3.1E-17 T 12-10-2018 Amet_1157 5f7ba0e7130f8d10db483c96f5e61da8 397 Pfam PF01979 Amidohydrolase family 52 386 2.2E-12 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_1157 5f7ba0e7130f8d10db483c96f5e61da8 397 PIRSF PIRSF038971 1 387 8.4E-90 T 12-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_1157 5f7ba0e7130f8d10db483c96f5e61da8 397 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 3 386 1.9E-122 T 12-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_1157 5f7ba0e7130f8d10db483c96f5e61da8 397 Gene3D G3DSA:2.30.40.10 3 55 3.1E-17 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_1157 5f7ba0e7130f8d10db483c96f5e61da8 397 SUPERFAMILY SSF51556 55 354 7.29E-14 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_1602 8d0907399e7d739ee6ce62c68175fa6e 685 Pfam PF13408 Recombinase zinc beta ribbon domain 331 389 8.4E-11 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_1602 8d0907399e7d739ee6ce62c68175fa6e 685 Pfam PF00239 Resolvase, N terminal domain 16 167 3.7E-23 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_1602 8d0907399e7d739ee6ce62c68175fa6e 685 SUPERFAMILY SSF53041 15 167 4.19E-21 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_1602 8d0907399e7d739ee6ce62c68175fa6e 685 SMART SM00857 16 168 8.5E-28 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_1602 8d0907399e7d739ee6ce62c68175fa6e 685 Gene3D G3DSA:3.40.50.1390 13 169 3.9E-22 T 12-10-2018 Amet_1602 8d0907399e7d739ee6ce62c68175fa6e 685 Pfam PF07508 Recombinase 193 315 3.7E-11 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_3565 428164480c00d58e3441de5a2085ff37 260 Pfam PF08305 NPCBM/NEW2 domain 167 258 9.3E-11 T 12-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module Amet_3565 428164480c00d58e3441de5a2085ff37 260 Gene3D G3DSA:2.60.120.1060 166 259 2.6E-9 T 12-10-2018 IPR038637 NPCBM domain superfamily Amet_3565 428164480c00d58e3441de5a2085ff37 260 SUPERFAMILY SSF55383 35 93 1.96E-7 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_3565 428164480c00d58e3441de5a2085ff37 260 SUPERFAMILY SSF49785 129 259 5.1E-19 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Amet_3565 428164480c00d58e3441de5a2085ff37 260 Pfam PF07833 Copper amine oxidase N-terminal domain 68 159 1.5E-8 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_3565 428164480c00d58e3441de5a2085ff37 260 Pfam PF07833 Copper amine oxidase N-terminal domain 40 98 1.5E-8 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_3008 4bc35aa19ab2e3388d126f7fc026ed46 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 62 1.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3008 4bc35aa19ab2e3388d126f7fc026ed46 201 Gene3D G3DSA:1.10.357.10 7 196 4.9E-24 T 12-10-2018 Amet_3008 4bc35aa19ab2e3388d126f7fc026ed46 201 SUPERFAMILY SSF46689 6 79 4.47E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3008 4bc35aa19ab2e3388d126f7fc026ed46 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_3008 4bc35aa19ab2e3388d126f7fc026ed46 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_4506 05403e7c7de13a3b2dfae57ef80e5f15 241 SUPERFAMILY SSF53448 6 229 5.63E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_4506 05403e7c7de13a3b2dfae57ef80e5f15 241 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 225 1.8E-75 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Amet_4506 05403e7c7de13a3b2dfae57ef80e5f15 241 Gene3D G3DSA:3.90.550.10 2 235 1.4E-78 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_4506 05403e7c7de13a3b2dfae57ef80e5f15 241 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 229 45.598 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Amet_4506 05403e7c7de13a3b2dfae57ef80e5f15 241 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Amet_4506 05403e7c7de13a3b2dfae57ef80e5f15 241 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 230 3.4E-71 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Amet_4086 0192a6e9c9c78fcd9726ed3a75de3b81 420 Gene3D G3DSA:3.30.565.10 268 420 2.1E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4086 0192a6e9c9c78fcd9726ed3a75de3b81 420 Pfam PF14501 GHKL domain 316 420 8.1E-16 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Amet_4086 0192a6e9c9c78fcd9726ed3a75de3b81 420 SMART SM00387 313 420 2.2E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4086 0192a6e9c9c78fcd9726ed3a75de3b81 420 SUPERFAMILY SSF55874 281 407 4.93E-22 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2340 aa338c38a8a8c966f78238f5068f756b 573 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 244 572 2.9E-70 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Amet_2340 aa338c38a8a8c966f78238f5068f756b 573 Pfam PF08486 Stage II sporulation protein 241 332 1.2E-26 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Amet_3149 0f2b28edbe835728ae4ecb9759c37d1b 507 Gene3D G3DSA:1.20.200.10 198 503 2.8E-122 T 12-10-2018 Amet_3149 0f2b28edbe835728ae4ecb9759c37d1b 507 Gene3D G3DSA:1.10.275.10 3 197 5.3E-73 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal Amet_3149 0f2b28edbe835728ae4ecb9759c37d1b 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 502 47.257 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_3149 0f2b28edbe835728ae4ecb9759c37d1b 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 502 3.3E-212 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_3149 0f2b28edbe835728ae4ecb9759c37d1b 507 SUPERFAMILY SSF48557 3 497 7.85E-197 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 Amet_3149 0f2b28edbe835728ae4ecb9759c37d1b 507 Pfam PF00221 Aromatic amino acid lyase 11 469 1.2E-200 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Amet_3149 0f2b28edbe835728ae4ecb9759c37d1b 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Amet_3430 aa8422b3e289b17e10e6817865d87462 251 Pfam PF00188 Cysteine-rich secretory protein family 134 247 1.0E-14 T 12-10-2018 IPR014044 CAP domain Amet_3430 aa8422b3e289b17e10e6817865d87462 251 Gene3D G3DSA:3.40.33.10 16 250 3.1E-47 T 12-10-2018 IPR035940 CAP superfamily Amet_3430 aa8422b3e289b17e10e6817865d87462 251 SUPERFAMILY SSF55797 127 248 2.09E-19 T 12-10-2018 IPR035940 CAP superfamily Amet_3696 336d5cfff0afa40d4915a05752661737 189 Gene3D G3DSA:3.40.109.10 2 172 1.7E-44 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_3696 336d5cfff0afa40d4915a05752661737 189 Pfam PF00881 Nitroreductase family 61 149 1.4E-7 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amet_3696 336d5cfff0afa40d4915a05752661737 189 Pfam PF00881 Nitroreductase family 5 60 1.1E-13 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amet_3696 336d5cfff0afa40d4915a05752661737 189 SUPERFAMILY SSF55469 2 173 7.59E-38 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_4772 1c9c61e8dcb717159148f6c370ce194d 109 Pfam PF12643 MazG-like family 11 97 1.9E-27 T 12-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 Amet_3242 123b0f4556c3b6c4e15fe75d5ef34bd6 445 SUPERFAMILY SSF55785 345 440 8.9E-6 T 12-10-2018 IPR035965 PAS domain superfamily Amet_3242 123b0f4556c3b6c4e15fe75d5ef34bd6 445 SUPERFAMILY SSF58104 32 323 2.79E-52 T 12-10-2018 Amet_3242 123b0f4556c3b6c4e15fe75d5ef34bd6 445 Gene3D G3DSA:3.30.450.20 345 442 1.1E-6 T 12-10-2018 Amet_3242 123b0f4556c3b6c4e15fe75d5ef34bd6 445 Gene3D G3DSA:1.10.287.950 23 338 1.6E-57 T 12-10-2018 Amet_3242 123b0f4556c3b6c4e15fe75d5ef34bd6 445 SMART SM00283 57 333 6.8E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3242 123b0f4556c3b6c4e15fe75d5ef34bd6 445 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 132 279 7.5E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2022 4252e384a21c2abbb9555e9839ed879e 293 Pfam PF02219 Methylenetetrahydrofolate reductase 4 292 6.2E-39 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_2022 4252e384a21c2abbb9555e9839ed879e 293 Gene3D G3DSA:3.20.20.220 3 293 5.9E-54 T 12-10-2018 Amet_2022 4252e384a21c2abbb9555e9839ed879e 293 SUPERFAMILY SSF51730 1 292 7.26E-69 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like Amet_4530 42543fe9933d8043c8bbdfada23fbd17 279 SUPERFAMILY SSF58104 111 276 3.27E-35 T 12-10-2018 Amet_4530 42543fe9933d8043c8bbdfada23fbd17 279 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 131 276 1.4E-22 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_4530 42543fe9933d8043c8bbdfada23fbd17 279 SMART SM00283 99 279 0.0071 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_4530 42543fe9933d8043c8bbdfada23fbd17 279 Gene3D G3DSA:1.10.287.950 103 279 1.6E-31 T 12-10-2018 Amet_2493 7f75ebbd249707ef714dfae5964e6d4d 173 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 4 173 6.4E-50 T 12-10-2018 IPR014198 Stage III sporulation protein AB Amet_2493 7f75ebbd249707ef714dfae5964e6d4d 173 PIRSF PIRSF021435 2 173 2.2E-46 T 12-10-2018 IPR014198 Stage III sporulation protein AB Amet_2493 7f75ebbd249707ef714dfae5964e6d4d 173 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 4 173 5.9E-48 T 12-10-2018 IPR014198 Stage III sporulation protein AB Amet_2624 2b34053d51e86841578a0b497c10cd89 383 SUPERFAMILY SSF50249 264 353 9.7E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2624 2b34053d51e86841578a0b497c10cd89 383 SMART SM00316 194 264 3.2E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 SMART SM00316 107 175 5.0E-4 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 SMART SM00316 20 91 1.1E-15 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 SMART SM00316 279 350 1.6E-24 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 PRINTS PR00681 Ribosomal protein S1 signature 40 54 5.2E-50 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 PRINTS PR00681 Ribosomal protein S1 signature 333 351 5.2E-50 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 PRINTS PR00681 Ribosomal protein S1 signature 159 179 5.2E-50 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 PRINTS PR00681 Ribosomal protein S1 signature 130 147 5.2E-50 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 PRINTS PR00681 Ribosomal protein S1 signature 88 107 5.2E-50 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 PRINTS PR00681 Ribosomal protein S1 signature 22 40 5.2E-50 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 PRINTS PR00681 Ribosomal protein S1 signature 112 128 5.2E-50 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 PRINTS PR00681 Ribosomal protein S1 signature 216 237 5.2E-50 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 PRINTS PR00681 Ribosomal protein S1 signature 294 313 5.2E-50 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 Pfam PF00575 S1 RNA binding domain 277 349 6.9E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 Pfam PF00575 S1 RNA binding domain 19 91 2.1E-17 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 Pfam PF00575 S1 RNA binding domain 109 175 3.5E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 Pfam PF00575 S1 RNA binding domain 192 264 3.4E-23 T 12-10-2018 IPR003029 S1 domain GO:0003676 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 Gene3D G3DSA:2.40.50.140 275 360 9.3E-29 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 Gene3D G3DSA:2.40.50.140 191 273 8.3E-30 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 SUPERFAMILY SSF50249 194 278 1.57E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2624 2b34053d51e86841578a0b497c10cd89 383 Gene3D G3DSA:2.40.50.140 5 102 1.2E-20 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 Gene3D G3DSA:2.40.50.140 103 183 9.8E-10 T 12-10-2018 Amet_2624 2b34053d51e86841578a0b497c10cd89 383 SUPERFAMILY SSF50249 110 187 9.43E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2624 2b34053d51e86841578a0b497c10cd89 383 SUPERFAMILY SSF50249 1 116 6.86E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2542 234ab55aa646bf8f3c40742dfc01fc02 312 SUPERFAMILY SSF52540 5 159 2.33E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2542 234ab55aa646bf8f3c40742dfc01fc02 312 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 303 30.901 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Amet_2542 234ab55aa646bf8f3c40742dfc01fc02 312 Gene3D G3DSA:1.10.20.140 112 184 7.2E-103 T 12-10-2018 Amet_2542 234ab55aa646bf8f3c40742dfc01fc02 312 Pfam PF01715 IPP transferase 38 284 6.9E-83 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Amet_2542 234ab55aa646bf8f3c40742dfc01fc02 312 Gene3D G3DSA:3.40.50.300 9 287 7.2E-103 T 12-10-2018 Amet_2542 234ab55aa646bf8f3c40742dfc01fc02 312 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 291 9.1E-100 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Amet_0532 da1cf1a6a32d432f192928aa4a8e6eb5 103 Gene3D G3DSA:3.30.110.70 1 103 1.6E-24 T 12-10-2018 Amet_0532 da1cf1a6a32d432f192928aa4a8e6eb5 103 Pfam PF01906 Putative heavy-metal-binding 1 101 5.0E-32 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Amet_0532 da1cf1a6a32d432f192928aa4a8e6eb5 103 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 102 21.429 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 Amet_0532 da1cf1a6a32d432f192928aa4a8e6eb5 103 SUPERFAMILY SSF117782 1 102 1.28E-30 T 12-10-2018 IPR035439 UPF0145 domain superfamily Amet_1726 b94ca983d7d77fe02e0885c3716f468a 302 PIRSF PIRSF000428 1 302 1.5E-80 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Amet_1726 b94ca983d7d77fe02e0885c3716f468a 302 SUPERFAMILY SSF53659 5 299 6.58E-58 T 12-10-2018 Amet_1726 b94ca983d7d77fe02e0885c3716f468a 302 Pfam PF01515 Phosphate acetyl/butaryl transferase 79 294 2.1E-39 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Amet_1726 b94ca983d7d77fe02e0885c3716f468a 302 Pfam PF01515 Phosphate acetyl/butaryl transferase 7 72 1.8E-7 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Amet_1726 b94ca983d7d77fe02e0885c3716f468a 302 Gene3D G3DSA:3.40.718.10 3 300 4.8E-96 T 12-10-2018 Amet_3405 7db12172878e27e695a23e77305908b0 485 Pfam PF01391 Collagen triple helix repeat (20 copies) 296 349 8.7E-7 T 12-10-2018 IPR008160 Collagen triple helix repeat Amet_3405 7db12172878e27e695a23e77305908b0 485 Pfam PF01391 Collagen triple helix repeat (20 copies) 47 104 1.7E-8 T 12-10-2018 IPR008160 Collagen triple helix repeat Amet_4312 3da489bf84e9ac8a021b502b3e2329c2 409 Gene3D G3DSA:2.170.120.30 314 408 4.2E-13 T 12-10-2018 Amet_4312 3da489bf84e9ac8a021b502b3e2329c2 409 Pfam PF07949 YbbR-like protein 320 403 8.4E-8 T 12-10-2018 IPR012505 YbbR-like Amet_4312 3da489bf84e9ac8a021b502b3e2329c2 409 Pfam PF07949 YbbR-like protein 134 199 7.3E-13 T 12-10-2018 IPR012505 YbbR-like Amet_4312 3da489bf84e9ac8a021b502b3e2329c2 409 Pfam PF07949 YbbR-like protein 41 123 9.9E-7 T 12-10-2018 IPR012505 YbbR-like Amet_4312 3da489bf84e9ac8a021b502b3e2329c2 409 Pfam PF07949 YbbR-like protein 224 303 2.2E-13 T 12-10-2018 IPR012505 YbbR-like Amet_4312 3da489bf84e9ac8a021b502b3e2329c2 409 Gene3D G3DSA:2.170.120.40 133 219 7.0E-9 T 12-10-2018 Amet_4312 3da489bf84e9ac8a021b502b3e2329c2 409 Gene3D G3DSA:2.170.120.40 221 306 1.9E-11 T 12-10-2018 Amet_4312 3da489bf84e9ac8a021b502b3e2329c2 409 Gene3D G3DSA:2.170.120.30 30 132 2.0E-18 T 12-10-2018 Amet_2705 01a317b3828cdd0fd2c236f2034031c3 263 Pfam PF01311 Bacterial export proteins, family 1 14 249 6.5E-68 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amet_2705 01a317b3828cdd0fd2c236f2034031c3 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 5.4E-26 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amet_2705 01a317b3828cdd0fd2c236f2034031c3 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 5.4E-26 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amet_2705 01a317b3828cdd0fd2c236f2034031c3 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 5.4E-26 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amet_2705 01a317b3828cdd0fd2c236f2034031c3 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 5.4E-26 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Amet_2705 01a317b3828cdd0fd2c236f2034031c3 263 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 256 6.5E-61 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 8.3E-37 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 PRINTS PR00474 Glutamate 5-kinase family signature 121 142 8.3E-37 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 PRINTS PR00474 Glutamate 5-kinase family signature 214 234 8.3E-37 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 PRINTS PR00474 Glutamate 5-kinase family signature 81 109 8.3E-37 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 PRINTS PR00474 Glutamate 5-kinase family signature 153 180 8.3E-37 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 PIRSF PIRSF000729 5 263 4.2E-80 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 Pfam PF00696 Amino acid kinase family 10 240 8.2E-40 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 261 1.5E-77 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 SUPERFAMILY SSF53633 10 260 2.88E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 Gene3D G3DSA:3.40.1160.10 1 263 5.1E-73 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_0673 7a9c33fecc5c7bf3dd2278f4c7910991 264 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 264 30.514 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Amet_1545 d345f921a6b614c598c5151cacd13a95 267 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1545 d345f921a6b614c598c5151cacd13a95 267 SUPERFAMILY SSF52540 15 258 3.08E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1545 d345f921a6b614c598c5151cacd13a95 267 Gene3D G3DSA:3.40.50.300 21 261 1.6E-95 T 12-10-2018 Amet_1545 d345f921a6b614c598c5151cacd13a95 267 SMART SM00382 48 234 7.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1545 d345f921a6b614c598c5151cacd13a95 267 Pfam PF00005 ABC transporter 39 188 1.5E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3481 75f95561848684202a6ed58ce6fbb2d1 351 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 339 3.2E-148 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Amet_3481 75f95561848684202a6ed58ce6fbb2d1 351 SMART SM00382 122 247 1.7E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3481 75f95561848684202a6ed58ce6fbb2d1 351 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein Amet_3481 75f95561848684202a6ed58ce6fbb2d1 351 Pfam PF00437 Type II/IV secretion system protein 84 268 7.5E-43 T 12-10-2018 IPR001482 Type II/IV secretion system protein Amet_3481 75f95561848684202a6ed58ce6fbb2d1 351 SUPERFAMILY SSF52540 5 335 6.2E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3481 75f95561848684202a6ed58ce6fbb2d1 351 Gene3D G3DSA:3.40.50.300 102 349 1.0E-99 T 12-10-2018 Amet_3481 75f95561848684202a6ed58ce6fbb2d1 351 Gene3D G3DSA:3.30.450.90 1 100 3.1E-36 T 12-10-2018 Amet_0772 fbc9b983f89de95c5de5d7dac7b2d9a0 221 Pfam PF03471 Transporter associated domain 136 208 2.8E-7 T 12-10-2018 IPR005170 Transporter-associated domain Amet_0772 fbc9b983f89de95c5de5d7dac7b2d9a0 221 SUPERFAMILY SSF56176 136 215 8.18E-8 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_0772 fbc9b983f89de95c5de5d7dac7b2d9a0 221 Gene3D G3DSA:3.30.465.10 130 208 1.3E-7 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_0772 fbc9b983f89de95c5de5d7dac7b2d9a0 221 SMART SM01091 129 210 0.0039 T 12-10-2018 IPR005170 Transporter-associated domain Amet_3776 99c1d9240bdb42ee8f43f4ed5c090c13 349 Gene3D G3DSA:3.40.50.150 57 346 1.3E-83 T 12-10-2018 Amet_3776 99c1d9240bdb42ee8f43f4ed5c090c13 349 SUPERFAMILY SSF53335 51 348 1.27E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_3776 99c1d9240bdb42ee8f43f4ed5c090c13 349 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 51 348 1.4E-66 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amet_3776 99c1d9240bdb42ee8f43f4ed5c090c13 349 Gene3D G3DSA:1.10.150.170 160 269 1.3E-83 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Amet_3776 99c1d9240bdb42ee8f43f4ed5c090c13 349 SUPERFAMILY SSF81799 162 268 3.4E-22 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Amet_3776 99c1d9240bdb42ee8f43f4ed5c090c13 349 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 52 349 29.79 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amet_3776 99c1d9240bdb42ee8f43f4ed5c090c13 349 PIRSF PIRSF004486 46 349 7.5E-81 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amet_3776 99c1d9240bdb42ee8f43f4ed5c090c13 349 Pfam PF01795 MraW methylase family 51 347 5.1E-68 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amet_0483 4c9dea7276bd3a224314fc5a154ca4d7 552 Pfam PF01546 Peptidase family M20/M25/M40 127 359 1.1E-10 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_0483 4c9dea7276bd3a224314fc5a154ca4d7 552 SUPERFAMILY SSF53187 15 541 3.71E-29 T 12-10-2018 Amet_0483 4c9dea7276bd3a224314fc5a154ca4d7 552 Gene3D G3DSA:3.40.630.10 12 242 2.7E-34 T 12-10-2018 Amet_0483 4c9dea7276bd3a224314fc5a154ca4d7 552 PIRSF PIRSF010386 5 552 4.3E-152 T 12-10-2018 IPR012166 Uncharacterised protein family RocB Amet_1395 42a1ceb3e865cca5c5de023d6b02ddd3 261 Pfam PF13411 MerR HTH family regulatory protein 3 69 2.0E-9 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_1395 42a1ceb3e865cca5c5de023d6b02ddd3 261 SUPERFAMILY SSF46955 3 110 3.57E-15 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_1395 42a1ceb3e865cca5c5de023d6b02ddd3 261 SMART SM00422 3 71 0.0016 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_1395 42a1ceb3e865cca5c5de023d6b02ddd3 261 Gene3D G3DSA:1.10.1660.10 1 122 1.1E-17 T 12-10-2018 Amet_0863 976a99c37552aad22102906916ab7f89 119 Pfam PF08291 Peptidase M15 8 108 5.1E-28 T 12-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 Amet_0863 976a99c37552aad22102906916ab7f89 119 SUPERFAMILY SSF55166 9 117 5.49E-32 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_0863 976a99c37552aad22102906916ab7f89 119 Gene3D G3DSA:3.30.1380.10 9 119 8.7E-30 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_0304 adc3de19ffb9fd0b2cdfc03e50f59466 402 SUPERFAMILY SSF53098 1 376 1.82E-70 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_0304 adc3de19ffb9fd0b2cdfc03e50f59466 402 Pfam PF01609 Transposase DDE domain 91 327 7.5E-27 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_4009 72b98dbbfa568d53542d06e3fbe3cf3e 649 PRINTS PR00868 DNA-polymerase family A (pol I) signature 417 430 2.6E-6 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_4009 72b98dbbfa568d53542d06e3fbe3cf3e 649 PRINTS PR00868 DNA-polymerase family A (pol I) signature 387 410 2.6E-6 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_4009 72b98dbbfa568d53542d06e3fbe3cf3e 649 PRINTS PR00868 DNA-polymerase family A (pol I) signature 598 611 2.6E-6 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_4009 72b98dbbfa568d53542d06e3fbe3cf3e 649 SMART SM00482 373 615 5.6E-16 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_4009 72b98dbbfa568d53542d06e3fbe3cf3e 649 Gene3D G3DSA:1.10.150.20 396 583 2.8E-26 T 12-10-2018 Amet_4009 72b98dbbfa568d53542d06e3fbe3cf3e 649 Pfam PF00476 DNA polymerase family A 231 613 4.4E-26 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_4009 72b98dbbfa568d53542d06e3fbe3cf3e 649 SUPERFAMILY SSF56672 194 647 2.33E-84 T 12-10-2018 Amet_4009 72b98dbbfa568d53542d06e3fbe3cf3e 649 Gene3D G3DSA:3.30.70.370 324 615 2.8E-26 T 12-10-2018 Amet_4009 72b98dbbfa568d53542d06e3fbe3cf3e 649 SUPERFAMILY SSF53098 34 189 6.83E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2668 a54d6704b499f84a222fc0abb7b7ca5e 87 SMART SM01387 6 86 5.5E-54 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2668 a54d6704b499f84a222fc0abb7b7ca5e 87 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 87 1.7E-41 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2668 a54d6704b499f84a222fc0abb7b7ca5e 87 SUPERFAMILY SSF47060 3 87 2.94E-36 T 12-10-2018 IPR009068 S15/NS1, RNA-binding Amet_2668 a54d6704b499f84a222fc0abb7b7ca5e 87 ProSitePatterns PS00362 Ribosomal protein S15 signature. 37 67 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2668 a54d6704b499f84a222fc0abb7b7ca5e 87 Pfam PF00312 Ribosomal protein S15 6 86 2.3E-38 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_2668 a54d6704b499f84a222fc0abb7b7ca5e 87 Gene3D G3DSA:1.10.287.10 1 87 1.2E-36 T 12-10-2018 Amet_2668 a54d6704b499f84a222fc0abb7b7ca5e 87 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 87 22.755 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_2668 a54d6704b499f84a222fc0abb7b7ca5e 87 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 9 86 2.0E-39 T 12-10-2018 Amet_2296 feb99620ac860d318eaab53c54b2e11e 94 Hamap MF_00262 Cell division topological specificity factor [minE]. 1 91 16.669 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Amet_2296 feb99620ac860d318eaab53c54b2e11e 94 SUPERFAMILY SSF55229 32 90 6.93E-12 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Amet_2296 feb99620ac860d318eaab53c54b2e11e 94 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 2 87 1.4E-23 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Amet_2296 feb99620ac860d318eaab53c54b2e11e 94 Gene3D G3DSA:3.30.1070.10 1 84 2.0E-18 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Amet_2296 feb99620ac860d318eaab53c54b2e11e 94 Pfam PF03776 Septum formation topological specificity factor MinE 15 87 2.1E-26 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Amet_1831 b02dd5b3c9026cc26eae51d44e5a600c 296 SUPERFAMILY SSF52540 18 291 1.55E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1831 b02dd5b3c9026cc26eae51d44e5a600c 296 Gene3D G3DSA:3.40.50.300 6 296 1.2E-78 T 12-10-2018 Amet_1831 b02dd5b3c9026cc26eae51d44e5a600c 296 Pfam PF02374 Anion-transporting ATPase 16 295 1.8E-76 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Amet_1831 b02dd5b3c9026cc26eae51d44e5a600c 296 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 19 294 8.9E-69 T 12-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 SUPERFAMILY SSF89550 341 568 1.12E-54 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 Gene3D G3DSA:3.30.460.10 156 261 4.8E-24 T 12-10-2018 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 Gene3D G3DSA:1.10.150.110 1 85 5.2E-25 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Amet_3166 71156a4c01858efaa2cee14494de4c11 575 SUPERFAMILY SSF81301 160 315 9.81E-37 T 12-10-2018 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 Gene3D G3DSA:1.10.150.20 86 153 7.8E-21 T 12-10-2018 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 Pfam PF02811 PHP domain 341 423 1.0E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 SMART SM00483 1 315 4.7E-29 T 12-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 SMART SM00278 91 110 37.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 SMART SM00278 51 70 56.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 SMART SM00278 126 145 22.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 Gene3D G3DSA:3.30.210.10 262 326 4.1E-24 T 12-10-2018 IPR037160 DNA polymerase, thumb domain superfamily Amet_3166 71156a4c01858efaa2cee14494de4c11 575 Pfam PF14791 DNA polymerase beta thumb 255 315 5.3E-19 T 12-10-2018 IPR029398 DNA polymerase beta, thumb domain Amet_3166 71156a4c01858efaa2cee14494de4c11 575 SMART SM00481 339 418 7.8E-11 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Amet_3166 71156a4c01858efaa2cee14494de4c11 575 SUPERFAMILY SSF47802 3 84 3.66E-18 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Amet_3166 71156a4c01858efaa2cee14494de4c11 575 Gene3D G3DSA:3.20.20.140 327 573 1.3E-78 T 12-10-2018 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 Pfam PF14520 Helix-hairpin-helix domain 92 143 1.3E-7 T 12-10-2018 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 Pfam PF14716 Helix-hairpin-helix domain 4 72 2.8E-20 T 12-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain Amet_3166 71156a4c01858efaa2cee14494de4c11 575 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 297 314 2.8E-6 T 12-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 255 262 2.8E-6 T 12-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 58 75 2.8E-6 T 12-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_3166 71156a4c01858efaa2cee14494de4c11 575 PIRSF PIRSF005047 1 573 4.0E-223 T 12-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Amet_1552 1f3abbb6e214d1ffba96e279db769bdf 276 Gene3D G3DSA:1.10.1660.10 2 149 3.4E-18 T 12-10-2018 Amet_1552 1f3abbb6e214d1ffba96e279db769bdf 276 Pfam PF13411 MerR HTH family regulatory protein 3 69 3.5E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_1552 1f3abbb6e214d1ffba96e279db769bdf 276 SUPERFAMILY SSF46955 3 104 1.54E-14 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_1552 1f3abbb6e214d1ffba96e279db769bdf 276 SMART SM00422 3 72 5.4E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_0919 631053cd439e2d29175a388625610a71 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 78 1.1E-30 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_0919 631053cd439e2d29175a388625610a71 80 SUPERFAMILY SSF82697 1 78 2.79E-28 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0919 631053cd439e2d29175a388625610a71 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 77 9.0E-34 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_0919 631053cd439e2d29175a388625610a71 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 20.871 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_0919 631053cd439e2d29175a388625610a71 80 Gene3D G3DSA:3.30.1280.10 1 80 1.1E-30 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Amet_0919 631053cd439e2d29175a388625610a71 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 78 8.6E-32 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_0014 b23d21f45124c378d562462a7bc53ba5 287 Gene3D G3DSA:2.102.30.10 4 279 2.3E-113 T 12-10-2018 Amet_0014 b23d21f45124c378d562462a7bc53ba5 287 Gene3D G3DSA:2.40.10.170 12 140 2.3E-113 T 12-10-2018 Amet_0014 b23d21f45124c378d562462a7bc53ba5 287 Pfam PF14505 Domain of unknown function (DUF4438) 27 284 1.6E-120 T 12-10-2018 IPR029433 Protein of unknown function DUF4438 Amet_0014 b23d21f45124c378d562462a7bc53ba5 287 Gene3D G3DSA:4.10.1180.10 25 63 2.3E-113 T 12-10-2018 Amet_0326 f41405e847d9eecb213fe5cc233ef718 273 ProSitePatterns PS00552 MerR-type HTH domain signature. 9 31 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_0326 f41405e847d9eecb213fe5cc233ef718 273 Gene3D G3DSA:1.10.1660.10 4 129 6.0E-21 T 12-10-2018 Amet_0326 f41405e847d9eecb213fe5cc233ef718 273 SMART SM00422 6 74 2.4E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_0326 f41405e847d9eecb213fe5cc233ef718 273 SUPERFAMILY SSF46955 8 112 1.39E-20 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_0326 f41405e847d9eecb213fe5cc233ef718 273 Pfam PF13411 MerR HTH family regulatory protein 7 71 8.2E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 SUPERFAMILY SSF54211 566 758 7.21E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_3635 669ede3e50b59bc866f496c0b3791763 785 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 565 754 3.4E-9 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 Gene3D G3DSA:3.40.50.300 5 174 4.2E-25 T 12-10-2018 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 Gene3D G3DSA:3.40.50.300 254 451 7.2E-57 T 12-10-2018 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 Gene3D G3DSA:1.10.8.60 452 538 2.7E-11 T 12-10-2018 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 Pfam PF13654 AAA domain 26 541 3.0E-183 T 12-10-2018 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 Gene3D G3DSA:3.30.230.10 543 779 4.5E-93 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_3635 669ede3e50b59bc866f496c0b3791763 785 SUPERFAMILY SSF52540 35 538 7.67E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3635 669ede3e50b59bc866f496c0b3791763 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 6.1E-14 T 12-10-2018 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 678 697 6.1E-14 T 12-10-2018 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 567 583 6.1E-14 T 12-10-2018 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 648 667 6.1E-14 T 12-10-2018 Amet_3635 669ede3e50b59bc866f496c0b3791763 785 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 708 726 6.1E-14 T 12-10-2018 Amet_2080 6dba4dbba21b2b69931bc6f7b0e4dc53 269 Pfam PF00795 Carbon-nitrogen hydrolase 4 238 9.2E-50 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Amet_2080 6dba4dbba21b2b69931bc6f7b0e4dc53 269 Gene3D G3DSA:3.60.110.10 1 257 3.2E-72 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amet_2080 6dba4dbba21b2b69931bc6f7b0e4dc53 269 SUPERFAMILY SSF56317 2 252 6.54E-68 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amet_4665 bcdcafb0c5a86db927bf8f67c0d18b80 447 Pfam PF03313 Serine dehydratase alpha chain 87 421 1.6E-53 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Amet_4665 bcdcafb0c5a86db927bf8f67c0d18b80 447 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 1 426 35.54 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 Amet_4665 bcdcafb0c5a86db927bf8f67c0d18b80 447 PIRSF PIRSF006054 1 428 1.5E-142 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 Amet_0984 ba25c698849c916867af64dd07c76740 357 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 14 342 8.8E-115 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Amet_0984 ba25c698849c916867af64dd07c76740 357 PIRSF PIRSF005508 2 357 1.3E-128 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Amet_0984 ba25c698849c916867af64dd07c76740 357 Gene3D G3DSA:1.20.1530.20 8 344 4.8E-27 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Amet_0984 ba25c698849c916867af64dd07c76740 357 Pfam PF01758 Sodium Bile acid symporter family 58 255 8.7E-44 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Amet_3221 d8614e936aca8d8821ba46f4c2034e0b 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 483 2.5E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3221 d8614e936aca8d8821ba46f4c2034e0b 539 Gene3D G3DSA:3.30.450.20 110 206 1.1E-12 T 12-10-2018 Amet_3221 d8614e936aca8d8821ba46f4c2034e0b 539 SUPERFAMILY SSF58104 247 538 3.14E-51 T 12-10-2018 Amet_3221 d8614e936aca8d8821ba46f4c2034e0b 539 Gene3D G3DSA:1.10.287.950 207 538 3.5E-53 T 12-10-2018 Amet_3221 d8614e936aca8d8821ba46f4c2034e0b 539 SMART SM00283 263 538 7.6E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3221 d8614e936aca8d8821ba46f4c2034e0b 539 SUPERFAMILY SSF103190 119 213 4.45E-6 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_3221 d8614e936aca8d8821ba46f4c2034e0b 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 1.3E-11 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_3221 d8614e936aca8d8821ba46f4c2034e0b 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 1.3E-11 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_4152 9193e3c77961af8b3a24a3ef67e9be8a 498 Pfam PF00361 Proton-conducting membrane transporter 133 428 6.9E-71 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4152 9193e3c77961af8b3a24a3ef67e9be8a 498 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 115 1.7E-7 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4152 9193e3c77961af8b3a24a3ef67e9be8a 498 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 223 244 2.1E-15 T 12-10-2018 Amet_4152 9193e3c77961af8b3a24a3ef67e9be8a 498 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 78 103 2.1E-15 T 12-10-2018 Amet_4152 9193e3c77961af8b3a24a3ef67e9be8a 498 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 2.1E-15 T 12-10-2018 Amet_4152 9193e3c77961af8b3a24a3ef67e9be8a 498 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 2.1E-15 T 12-10-2018 Amet_4152 9193e3c77961af8b3a24a3ef67e9be8a 498 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 422 441 2.1E-15 T 12-10-2018 Amet_3094 255a04833235c121197190e1a9628669 163 SUPERFAMILY SSF52833 6 157 4.14E-51 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_3094 255a04833235c121197190e1a9628669 163 Gene3D G3DSA:3.40.30.10 73 163 2.3E-28 T 12-10-2018 Amet_3094 255a04833235c121197190e1a9628669 163 Gene3D G3DSA:1.10.10.1590 2 72 1.3E-16 T 12-10-2018 Amet_3094 255a04833235c121197190e1a9628669 163 PIRSF PIRSF000216 3 162 4.0E-54 T 12-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_3094 255a04833235c121197190e1a9628669 163 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 155 3.3E-52 T 12-10-2018 Amet_3935 7db9c55ee2333566f00aceb3c56b191d 234 Pfam PF13411 MerR HTH family regulatory protein 2 55 1.8E-9 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_3935 7db9c55ee2333566f00aceb3c56b191d 234 SUPERFAMILY SSF46955 1 94 3.33E-19 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_3935 7db9c55ee2333566f00aceb3c56b191d 234 SUPERFAMILY SSF89082 144 229 1.28E-5 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Amet_3935 7db9c55ee2333566f00aceb3c56b191d 234 Pfam PF07739 TipAS antibiotic-recognition domain 120 228 8.3E-10 T 12-10-2018 IPR012925 TipAS antibiotic-recognition domain Amet_3935 7db9c55ee2333566f00aceb3c56b191d 234 SMART SM00422 1 57 3.7E-9 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_3935 7db9c55ee2333566f00aceb3c56b191d 234 Gene3D G3DSA:1.10.1660.10 1 124 1.0E-28 T 12-10-2018 Amet_1136 0186d10218570226f920f86079009fab 444 PIRSF PIRSF006603 3 440 6.3E-50 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1136 0186d10218570226f920f86079009fab 444 Pfam PF01554 MatE 241 389 1.0E-15 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1136 0186d10218570226f920f86079009fab 444 Pfam PF01554 MatE 12 172 1.4E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1136 0186d10218570226f920f86079009fab 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 12 406 3.6E-74 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_2738 3c037d5e96bb63111807fd7da5199347 422 SUPERFAMILY SSF102114 153 393 1.09E-29 T 12-10-2018 Amet_2738 3c037d5e96bb63111807fd7da5199347 422 Gene3D G3DSA:3.20.20.70 99 383 3.6E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2738 3c037d5e96bb63111807fd7da5199347 422 Pfam PF12544 Lysine-2,3-aminomutase 356 411 1.4E-15 T 12-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain Amet_2738 3c037d5e96bb63111807fd7da5199347 422 TIGRFAM TIGR00238 TIGR00238: KamA family protein 50 377 2.0E-97 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Amet_2738 3c037d5e96bb63111807fd7da5199347 422 PIRSF PIRSF004911 38 421 8.1E-133 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Amet_2738 3c037d5e96bb63111807fd7da5199347 422 Pfam PF04055 Radical SAM superfamily 163 314 2.6E-7 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_2738 3c037d5e96bb63111807fd7da5199347 422 TIGRFAM TIGR04368 Glu_2_3_NH3_mut: glutamate 2,3-aminomutase 9 411 7.8E-215 T 12-10-2018 IPR030801 Glutamate 2,3-aminomutase GO:0016869 Amet_0155 3ab84f5727b46490f2720e9d7dac55e1 98 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 93 27.544 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 Amet_0155 3ab84f5727b46490f2720e9d7dac55e1 98 Pfam PF04026 SpoVG 1 81 5.6E-37 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 Amet_0155 3ab84f5727b46490f2720e9d7dac55e1 98 SUPERFAMILY SSF160537 1 82 2.62E-32 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Amet_0155 3ab84f5727b46490f2720e9d7dac55e1 98 Gene3D G3DSA:3.30.1120.40 1 97 1.8E-36 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Amet_1411 8458f5982fe9c740b748100d47241960 371 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 2 205 1.1E-30 T 12-10-2018 IPR000477 Reverse transcriptase domain Amet_1411 8458f5982fe9c740b748100d47241960 371 Pfam PF08388 Group II intron, maturase-specific domain 222 299 8.6E-25 T 12-10-2018 IPR013597 Group II intron, maturase-specific Amet_1411 8458f5982fe9c740b748100d47241960 371 SUPERFAMILY SSF56672 2 290 1.33E-34 T 12-10-2018 Amet_1392 56b8e86e583238d5989180b58bbce2f0 231 Pfam PF00027 Cyclic nucleotide-binding domain 36 115 1.0E-8 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Amet_1392 56b8e86e583238d5989180b58bbce2f0 231 Gene3D G3DSA:2.60.120.1460 23 227 4.7E-28 T 12-10-2018 Amet_1392 56b8e86e583238d5989180b58bbce2f0 231 Pfam PF13545 Crp-like helix-turn-helix domain 154 225 8.5E-9 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_1392 56b8e86e583238d5989180b58bbce2f0 231 SUPERFAMILY SSF51206 20 139 1.96E-25 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Amet_1392 56b8e86e583238d5989180b58bbce2f0 231 SUPERFAMILY SSF46785 151 227 5.15E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 SUPERFAMILY SSF53067 3 254 4.02E-99 T 12-10-2018 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 61.489 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 Gene3D G3DSA:3.30.420.40 253 499 8.5E-95 T 12-10-2018 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 3.3E-66 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 1.7E-89 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 SUPERFAMILY SSF53067 254 496 1.0E-90 T 12-10-2018 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 PIRSF PIRSF000538 2 500 1.1E-188 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 Gene3D G3DSA:3.30.420.40 1 252 2.2E-111 T 12-10-2018 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 495 1.7E-235 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Amet_0557 7dd47d15eeb82718d146e4f0a7af15f5 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amet_0502 bd18bfaa43056ebc7b4e015d8e52be7e 574 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_0502 bd18bfaa43056ebc7b4e015d8e52be7e 574 Pfam PF00920 Dehydratase family 34 572 4.7E-176 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_0502 bd18bfaa43056ebc7b4e015d8e52be7e 574 Gene3D G3DSA:3.50.30.80 386 536 1.2E-48 T 12-10-2018 Amet_0502 bd18bfaa43056ebc7b4e015d8e52be7e 574 SUPERFAMILY SSF143975 7 381 1.7E-115 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_0502 bd18bfaa43056ebc7b4e015d8e52be7e 574 SUPERFAMILY SSF52016 387 572 6.43E-52 T 12-10-2018 Amet_0502 bd18bfaa43056ebc7b4e015d8e52be7e 574 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 474 485 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Amet_0220 3777fb61564206ca1ede808e8df53bdf 512 Gene3D G3DSA:3.40.50.300 190 504 3.9E-57 T 12-10-2018 Amet_0220 3777fb61564206ca1ede808e8df53bdf 512 SUPERFAMILY SSF54211 9 169 1.25E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_0220 3777fb61564206ca1ede808e8df53bdf 512 SUPERFAMILY SSF52540 191 497 2.0E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0220 3777fb61564206ca1ede808e8df53bdf 512 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 9 498 1.1E-166 T 12-10-2018 IPR004482 Mg chelatase-related protein Amet_0220 3777fb61564206ca1ede808e8df53bdf 512 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 4.4E-40 T 12-10-2018 Amet_0220 3777fb61564206ca1ede808e8df53bdf 512 SMART SM00382 212 393 0.0073 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0220 3777fb61564206ca1ede808e8df53bdf 512 Gene3D G3DSA:3.30.230.10 1 169 1.7E-13 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_0220 3777fb61564206ca1ede808e8df53bdf 512 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 404 500 1.2E-25 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Amet_0220 3777fb61564206ca1ede808e8df53bdf 512 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 392 1.0E-86 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain Amet_1466 232510bb36a0c7fb73fef587badd038b 286 SUPERFAMILY SSF54862 57 130 1.78E-18 T 12-10-2018 Amet_1466 232510bb36a0c7fb73fef587badd038b 286 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_1466 232510bb36a0c7fb73fef587badd038b 286 Pfam PF00037 4Fe-4S binding domain 91 112 6.2E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_1466 232510bb36a0c7fb73fef587badd038b 286 Gene3D G3DSA:3.30.70.20 65 113 3.5E-11 T 12-10-2018 Amet_1466 232510bb36a0c7fb73fef587badd038b 286 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 262 2.4E-17 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_1466 232510bb36a0c7fb73fef587badd038b 286 SUPERFAMILY SSF52540 1 272 2.93E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0994 b575808daff7f585c25b57a1173cbe43 69 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 1.8E-7 T 12-10-2018 Amet_0994 b575808daff7f585c25b57a1173cbe43 69 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 1.8E-7 T 12-10-2018 Amet_0994 b575808daff7f585c25b57a1173cbe43 69 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 1.8E-7 T 12-10-2018 Amet_0994 b575808daff7f585c25b57a1173cbe43 69 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 49 1.6E-18 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Amet_0994 b575808daff7f585c25b57a1173cbe43 69 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 69 19.778 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Amet_0994 b575808daff7f585c25b57a1173cbe43 69 Pfam PF02416 mttA/Hcf106 family 5 55 2.8E-21 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Amet_1503 e5d147de2b18542072c01dc845769c55 273 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 2 249 2.0E-4 T 12-10-2018 Amet_1503 e5d147de2b18542072c01dc845769c55 273 Pfam PF12787 EcsC protein family 7 258 2.6E-55 T 12-10-2018 IPR024787 EcsC protein Amet_4403 1c120515a42a163dde5dba66a99290bc 112 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 106 4.3E-19 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Amet_4403 1c120515a42a163dde5dba66a99290bc 112 SUPERFAMILY SSF101386 4 106 5.89E-28 T 12-10-2018 Amet_4403 1c120515a42a163dde5dba66a99290bc 112 PIRSF PIRSF029904 3 112 3.7E-52 T 12-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD Amet_4403 1c120515a42a163dde5dba66a99290bc 112 Gene3D G3DSA:1.10.287.1080 4 112 3.1E-35 T 12-10-2018 Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 ProSitePatterns PS00517 Ribonuclease III family signature. 50 58 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 SUPERFAMILY SSF54768 121 234 8.33E-23 T 12-10-2018 Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 SMART SM00358 168 235 3.7E-18 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 Hamap MF_00104 Ribonuclease 3 [rnc]. 14 231 32.344 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 Gene3D G3DSA:3.30.160.20 166 238 2.0E-22 T 12-10-2018 Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 Pfam PF00035 Double-stranded RNA binding motif 168 233 1.4E-14 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 SUPERFAMILY SSF69065 13 170 9.42E-50 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 SMART SM00535 26 161 2.9E-52 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 14 234 2.0E-82 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 Gene3D G3DSA:1.10.1520.10 12 158 3.8E-48 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Amet_2752 8f34afbed0cb2c7b786c9a283e71e540 239 Pfam PF14622 Ribonuclease-III-like 24 154 5.6E-42 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Amet_2515 9ff6d81394b0bf8e610b1777179e6fc9 274 Gene3D G3DSA:1.10.10.10 222 274 4.2E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2515 9ff6d81394b0bf8e610b1777179e6fc9 274 Gene3D G3DSA:1.10.10.10 108 151 1.2E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2515 9ff6d81394b0bf8e610b1777179e6fc9 274 Gene3D G3DSA:1.10.10.2800 1 107 3.5E-33 T 12-10-2018 Amet_2515 9ff6d81394b0bf8e610b1777179e6fc9 274 Hamap MF_01114 Regulatory protein RecX [recX]. 42 209 15.968 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Amet_2515 9ff6d81394b0bf8e610b1777179e6fc9 274 Pfam PF02631 RecX family 84 202 1.0E-25 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Amet_3245 8a99ad29335ab2fea80546091e6e653d 586 SUPERFAMILY SSF52540 33 286 1.89E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3245 8a99ad29335ab2fea80546091e6e653d 586 Gene3D G3DSA:3.40.50.300 49 284 9.0E-39 T 12-10-2018 Amet_3245 8a99ad29335ab2fea80546091e6e653d 586 Pfam PF00350 Dynamin family 49 195 1.7E-28 T 12-10-2018 IPR022812 Dynamin superfamily Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 1.9E-254 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 Gene3D G3DSA:3.50.7.10 190 370 2.6E-234 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 SUPERFAMILY SSF52029 183 374 8.52E-85 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 Gene3D G3DSA:1.10.560.10 7 520 2.6E-234 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 Hamap MF_00600 60 kDa chaperonin [groL]. 1 540 41.938 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 SUPERFAMILY SSF48592 6 520 1.5E-81 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 Gene3D G3DSA:3.30.260.10 135 408 2.6E-234 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 2.2E-104 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 SUPERFAMILY SSF54849 137 203 6.41E-26 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 PRINTS PR00298 60kDa chaperonin signature 266 289 2.2E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 PRINTS PR00298 60kDa chaperonin signature 26 52 2.2E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 PRINTS PR00298 60kDa chaperonin signature 348 373 2.2E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 PRINTS PR00298 60kDa chaperonin signature 82 109 2.2E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amet_0834 e8fe5d4e02f4cec3cf2d34d80bbb8843 547 PRINTS PR00298 60kDa chaperonin signature 396 417 2.2E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Amet_4028 2e4031e38591bd15220d9d6bb63aa0b7 402 Gene3D G3DSA:3.30.2320.10 254 394 1.5E-26 T 12-10-2018 Amet_4028 2e4031e38591bd15220d9d6bb63aa0b7 402 SUPERFAMILY SSF56563 120 402 1.44E-89 T 12-10-2018 Amet_4028 2e4031e38591bd15220d9d6bb63aa0b7 402 Gene3D G3DSA:3.30.2400.10 171 390 1.5E-26 T 12-10-2018 Amet_4028 2e4031e38591bd15220d9d6bb63aa0b7 402 Pfam PF05065 Phage capsid family 127 399 8.4E-90 T 12-10-2018 IPR024455 Phage capsid Amet_4028 2e4031e38591bd15220d9d6bb63aa0b7 402 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 7 399 1.6E-121 T 12-10-2018 IPR024455 Phage capsid Amet_4507 99549a43bde7b522aa3619e7fb7c603d 367 SUPERFAMILY SSF88723 168 294 7.2E-25 T 12-10-2018 IPR029060 PIN-like domain superfamily Amet_4507 99549a43bde7b522aa3619e7fb7c603d 367 Gene3D G3DSA:3.40.50.1010 161 297 1.9E-54 T 12-10-2018 Amet_4507 99549a43bde7b522aa3619e7fb7c603d 367 SMART SM00670 166 273 4.4E-11 T 12-10-2018 IPR002716 PIN domain Amet_4507 99549a43bde7b522aa3619e7fb7c603d 367 Pfam PF13638 PIN domain 169 283 2.1E-6 T 12-10-2018 IPR002716 PIN domain Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 Gene3D G3DSA:3.40.50.920 463 571 1.4E-19 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 Gene3D G3DSA:3.40.920.10 1 185 1.6E-21 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 5 569 7.7E-183 T 12-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 170 4.0E-32 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 209 450 4.1E-61 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 SUPERFAMILY SSF53323 5 219 1.03E-28 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 SUPERFAMILY SSF52518 197 456 3.6E-74 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 Gene3D G3DSA:3.40.50.970 186 385 2.8E-76 T 12-10-2018 Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 SUPERFAMILY SSF52922 474 569 5.38E-11 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_1199 45a82b62d55da001590cf3cae914d9a0 573 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 476 560 3.2E-6 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Amet_2122 9c4d87761754a4bdc94507f98f1f5480 296 Gene3D G3DSA:3.40.50.200 31 294 9.7E-39 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amet_2122 9c4d87761754a4bdc94507f98f1f5480 296 Pfam PF00082 Subtilase family 59 209 7.4E-14 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amet_2122 9c4d87761754a4bdc94507f98f1f5480 296 SUPERFAMILY SSF52743 40 293 5.5E-38 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amet_1421 1b39a72edc3be1ded8dbf55c2c2ecb36 194 SUPERFAMILY SSF52317 8 173 3.21E-28 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_1421 1b39a72edc3be1ded8dbf55c2c2ecb36 194 Gene3D G3DSA:3.40.50.880 5 194 2.5E-38 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_1421 1b39a72edc3be1ded8dbf55c2c2ecb36 194 Pfam PF01965 DJ-1/PfpI family 7 170 7.8E-21 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amet_3064 b8bc869afcfba6e2875a462dfa633569 748 SUPERFAMILY SSF116734 604 702 9.97E-6 T 12-10-2018 Amet_3064 b8bc869afcfba6e2875a462dfa633569 748 SUPERFAMILY SSF53335 6 401 3.25E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_3064 b8bc869afcfba6e2875a462dfa633569 748 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 288 294 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amet_3064 b8bc869afcfba6e2875a462dfa633569 748 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 186 200 4.3E-14 T 12-10-2018 Amet_3064 b8bc869afcfba6e2875a462dfa633569 748 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 322 346 4.3E-14 T 12-10-2018 Amet_3064 b8bc869afcfba6e2875a462dfa633569 748 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 285 297 4.3E-14 T 12-10-2018 Amet_3064 b8bc869afcfba6e2875a462dfa633569 748 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 124 140 4.3E-14 T 12-10-2018 Amet_3064 b8bc869afcfba6e2875a462dfa633569 748 Pfam PF02384 N-6 DNA Methylase 177 433 2.1E-12 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Amet_3064 b8bc869afcfba6e2875a462dfa633569 748 Pfam PF12950 TaqI-like C-terminal specificity domain 598 684 7.1E-12 T 12-10-2018 IPR025931 TaqI-like C-terminal specificity domain Amet_3232 f471e136ee653427732903f9dead2244 469 SUPERFAMILY SSF55874 364 459 1.44E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3232 f471e136ee653427732903f9dead2244 469 Gene3D G3DSA:3.30.565.10 341 460 4.7E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3232 f471e136ee653427732903f9dead2244 469 Pfam PF07730 Histidine kinase 263 323 1.6E-7 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amet_3232 f471e136ee653427732903f9dead2244 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 460 5.8E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3232 f471e136ee653427732903f9dead2244 469 SMART SM00387 369 462 1.2E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4316 21a9e6894edf31392bbc9d92b4a6722c 363 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 139 260 1.9E-11 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Amet_4316 21a9e6894edf31392bbc9d92b4a6722c 363 Gene3D G3DSA:3.40.50.720 124 267 1.1E-17 T 12-10-2018 Amet_4316 21a9e6894edf31392bbc9d92b4a6722c 363 SUPERFAMILY SSF51735 131 267 2.52E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1351 29b38da9c4b1ecd6d10554310ec279ba 305 Gene3D G3DSA:1.10.3680.10 1 147 5.3E-6 T 12-10-2018 IPR029024 TerB-like Amet_0712 ddb4e3fbd7e0567b963361f4ca10d2cb 409 Pfam PF00395 S-layer homology domain 350 391 1.4E-5 T 12-10-2018 IPR001119 S-layer homology domain Amet_0712 ddb4e3fbd7e0567b963361f4ca10d2cb 409 Pfam PF00395 S-layer homology domain 227 268 5.7E-8 T 12-10-2018 IPR001119 S-layer homology domain Amet_0712 ddb4e3fbd7e0567b963361f4ca10d2cb 409 Pfam PF00395 S-layer homology domain 291 332 4.1E-12 T 12-10-2018 IPR001119 S-layer homology domain Amet_0712 ddb4e3fbd7e0567b963361f4ca10d2cb 409 Pfam PF01464 Transglycosylase SLT domain 39 153 4.0E-9 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 Amet_0712 ddb4e3fbd7e0567b963361f4ca10d2cb 409 Gene3D G3DSA:1.10.530.10 31 182 4.8E-15 T 12-10-2018 Amet_0712 ddb4e3fbd7e0567b963361f4ca10d2cb 409 SUPERFAMILY SSF53955 23 144 8.23E-14 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily Amet_0802 16d26db7b51dee94e53d0ded207b04d3 196 Pfam PF12822 ECF transporter, substrate-specific component 9 186 5.9E-29 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Amet_0802 16d26db7b51dee94e53d0ded207b04d3 196 PIRSF PIRSF037778 4 196 8.9E-51 T 12-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 Amet_0802 16d26db7b51dee94e53d0ded207b04d3 196 Gene3D G3DSA:1.10.1760.20 6 196 6.5E-54 T 12-10-2018 Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 127 6.2E-13 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 Pfam PF12002 MgsA AAA+ ATPase C terminal 255 419 4.6E-64 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 Gene3D G3DSA:3.40.50.300 1 152 1.5E-38 T 12-10-2018 Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 Gene3D G3DSA:1.10.3710.10 333 422 1.6E-21 T 12-10-2018 Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 SMART SM00382 38 154 1.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 SUPERFAMILY SSF52540 3 233 4.64E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 Gene3D G3DSA:1.20.272.10 229 332 3.3E-42 T 12-10-2018 Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 SUPERFAMILY SSF48019 240 421 3.46E-69 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 Pfam PF16193 AAA C-terminal domain 177 254 2.6E-24 T 12-10-2018 IPR032423 AAA C-terminal domain Amet_2446 8bdf84ce32a179d0dac19d191e98133d 422 Gene3D G3DSA:1.10.8.60 153 226 6.7E-10 T 12-10-2018 Amet_0447 6b20aca4af480d38cdadffbeedd29390 74 Pfam PF12668 Protein of unknown function (DUF3791) 6 64 4.3E-18 T 12-10-2018 IPR024269 Protein of unknown function DUF3791 Amet_2567 93420de8d86d240392ae8251b9f4723c 136 Gene3D G3DSA:2.30.110.40 2 132 1.9E-34 T 12-10-2018 IPR038628 XkdM-like superfamily Amet_2567 93420de8d86d240392ae8251b9f4723c 136 SUPERFAMILY SSF69279 6 132 2.38E-39 T 12-10-2018 Amet_2567 93420de8d86d240392ae8251b9f4723c 136 Pfam PF09393 Phage tail tube protein 3 131 3.9E-44 T 12-10-2018 IPR018989 Phage tail tube protein Amet_3227 91307d6815491523e77d61e9a23e9f21 255 Pfam PF00072 Response regulator receiver domain 12 119 3.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3227 91307d6815491523e77d61e9a23e9f21 255 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 148 252 5.6E-18 T 12-10-2018 IPR018745 Domain of unknown function DUF2294 Amet_3227 91307d6815491523e77d61e9a23e9f21 255 SUPERFAMILY SSF52172 8 124 7.68E-33 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3227 91307d6815491523e77d61e9a23e9f21 255 SMART SM00448 10 120 7.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3227 91307d6815491523e77d61e9a23e9f21 255 Gene3D G3DSA:3.40.50.12740 9 211 7.7E-33 T 12-10-2018 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 SUPERFAMILY SSF51984 2 99 3.53E-15 T 12-10-2018 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 Gene3D G3DSA:3.90.190.20 318 454 6.9E-45 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 Pfam PF08245 Mur ligase middle domain 115 292 3.5E-36 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 Gene3D G3DSA:3.40.50.720 6 93 2.6E-24 T 12-10-2018 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 382 2.3E-6 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 7 450 1.2E-132 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 452 35.247 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 SUPERFAMILY SSF53244 312 452 2.93E-41 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 Gene3D G3DSA:3.40.1190.10 99 312 3.9E-64 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_2881 d3f9f6488b9072b06116ed7c883c8793 455 SUPERFAMILY SSF53623 101 310 6.15E-54 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_1514 7dedc7e7866f8e6ba91ef38aa126bf0c 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 247 3.1E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1514 7dedc7e7866f8e6ba91ef38aa126bf0c 256 Gene3D G3DSA:1.10.3720.10 47 254 4.7E-16 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1514 7dedc7e7866f8e6ba91ef38aa126bf0c 256 SUPERFAMILY SSF161098 50 236 2.49E-21 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1064 01d79a92a3aec815342320f1441b835f 513 Gene3D G3DSA:3.60.110.10 226 512 1.8E-54 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amet_1064 01d79a92a3aec815342320f1441b835f 513 Gene3D G3DSA:3.40.630.30 7 224 4.8E-58 T 12-10-2018 Amet_1064 01d79a92a3aec815342320f1441b835f 513 SUPERFAMILY SSF56317 227 492 3.01E-55 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amet_1064 01d79a92a3aec815342320f1441b835f 513 SUPERFAMILY SSF55729 15 142 6.42E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1064 01d79a92a3aec815342320f1441b835f 513 Pfam PF00795 Carbon-nitrogen hydrolase 230 487 1.1E-26 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Amet_1064 01d79a92a3aec815342320f1441b835f 513 Pfam PF00583 Acetyltransferase (GNAT) family 26 142 2.7E-12 T 12-10-2018 IPR000182 GNAT domain Amet_3556 a4d1d12b39da2a329f2a839e56007a9c 229 SUPERFAMILY SSF46894 128 226 4.82E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_3556 a4d1d12b39da2a329f2a839e56007a9c 229 Pfam PF00072 Response regulator receiver domain 4 112 4.4E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3556 a4d1d12b39da2a329f2a839e56007a9c 229 SMART SM00862 150 225 4.9E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3556 a4d1d12b39da2a329f2a839e56007a9c 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.4E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3556 a4d1d12b39da2a329f2a839e56007a9c 229 Gene3D G3DSA:3.40.50.2300 2 125 2.5E-29 T 12-10-2018 Amet_3556 a4d1d12b39da2a329f2a839e56007a9c 229 SMART SM00448 2 112 2.0E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3556 a4d1d12b39da2a329f2a839e56007a9c 229 Gene3D G3DSA:1.10.10.10 127 229 3.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3556 a4d1d12b39da2a329f2a839e56007a9c 229 SUPERFAMILY SSF52172 1 126 1.22E-32 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4187 f27f440c72bf446d27df57c4bf35d692 424 PIRSF PIRSF006351 1 420 1.9E-149 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 Amet_4187 f27f440c72bf446d27df57c4bf35d692 424 Pfam PF02378 Phosphotransferase system, EIIC 29 339 3.5E-54 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Amet_4187 f27f440c72bf446d27df57c4bf35d692 424 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 414 5.0E-120 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 Amet_2786 37a2a74a3358882a58a4496959766e99 147 PRINTS PR01576 Peptide deformylase signature 33 62 3.0E-33 T 12-10-2018 IPR023635 Peptide deformylase Amet_2786 37a2a74a3358882a58a4496959766e99 147 PRINTS PR01576 Peptide deformylase signature 98 116 3.0E-33 T 12-10-2018 IPR023635 Peptide deformylase Amet_2786 37a2a74a3358882a58a4496959766e99 147 PRINTS PR01576 Peptide deformylase signature 86 97 3.0E-33 T 12-10-2018 IPR023635 Peptide deformylase Amet_2786 37a2a74a3358882a58a4496959766e99 147 PRINTS PR01576 Peptide deformylase signature 117 146 3.0E-33 T 12-10-2018 IPR023635 Peptide deformylase Amet_2786 37a2a74a3358882a58a4496959766e99 147 Gene3D G3DSA:3.90.45.10 1 147 2.8E-53 T 12-10-2018 IPR036821 Peptide deformylase superfamily Amet_2786 37a2a74a3358882a58a4496959766e99 147 SUPERFAMILY SSF56420 3 145 7.46E-53 T 12-10-2018 IPR036821 Peptide deformylase superfamily Amet_2786 37a2a74a3358882a58a4496959766e99 147 PIRSF PIRSF004749 1 147 2.0E-48 T 12-10-2018 IPR023635 Peptide deformylase Amet_2786 37a2a74a3358882a58a4496959766e99 147 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 10 145 2.7E-47 T 12-10-2018 IPR023635 Peptide deformylase Amet_2786 37a2a74a3358882a58a4496959766e99 147 Hamap MF_00163 Peptide deformylase [def]. 2 147 26.657 T 12-10-2018 IPR023635 Peptide deformylase Amet_2786 37a2a74a3358882a58a4496959766e99 147 Pfam PF01327 Polypeptide deformylase 5 146 1.1E-46 T 12-10-2018 IPR023635 Peptide deformylase Amet_0070 62a1d81fc5c1b901f6be1e9b06436c38 377 Pfam PF01888 CbiD 12 268 9.3E-101 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Amet_0070 62a1d81fc5c1b901f6be1e9b06436c38 377 PIRSF PIRSF026782 8 366 6.7E-129 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Amet_0070 62a1d81fc5c1b901f6be1e9b06436c38 377 SUPERFAMILY SSF111342 3 286 7.59E-88 T 12-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Amet_0070 62a1d81fc5c1b901f6be1e9b06436c38 377 Gene3D G3DSA:3.30.2110.10 14 183 2.7E-53 T 12-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Amet_0070 62a1d81fc5c1b901f6be1e9b06436c38 377 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 19 357 1.1E-101 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Amet_0070 62a1d81fc5c1b901f6be1e9b06436c38 377 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 359 29.989 T 12-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Amet_1876 7743635d553e98a317b8792351e235f5 284 Gene3D G3DSA:3.40.50.10490 98 269 1.1E-16 T 12-10-2018 Amet_1876 7743635d553e98a317b8792351e235f5 284 SUPERFAMILY SSF53697 109 251 4.45E-14 T 12-10-2018 Amet_1876 7743635d553e98a317b8792351e235f5 284 Gene3D G3DSA:1.10.10.10 1 77 3.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1876 7743635d553e98a317b8792351e235f5 284 Pfam PF01380 SIS domain 124 245 5.5E-7 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Amet_1876 7743635d553e98a317b8792351e235f5 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 76 1.7E-13 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Amet_1876 7743635d553e98a317b8792351e235f5 284 SUPERFAMILY SSF46689 3 77 5.73E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_4214 c1c45f62b4dc45d65792a279de838842 351 Gene3D G3DSA:3.90.1010.20 232 351 1.4E-16 T 12-10-2018 Amet_4214 c1c45f62b4dc45d65792a279de838842 351 Gene3D G3DSA:3.90.1010.20 77 203 6.9E-21 T 12-10-2018 Amet_3954 e952f60661c8144001e4ac53e1be7844 259 SUPERFAMILY SSF52540 11 231 9.96E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3954 e952f60661c8144001e4ac53e1be7844 259 SMART SM00382 39 226 8.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3954 e952f60661c8144001e4ac53e1be7844 259 Gene3D G3DSA:3.40.50.300 8 251 3.0E-64 T 12-10-2018 Amet_3954 e952f60661c8144001e4ac53e1be7844 259 Pfam PF00005 ABC transporter 30 178 2.2E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0291 4846c23776f7254f1fb4b1f92357b740 596 SUPERFAMILY SSF82171 125 350 4.32E-10 T 12-10-2018 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 PIRSF PIRSF000185 1 410 1.4E-135 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 179 408 5.5E-62 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 Gene3D G3DSA:3.40.50.720 178 410 1.4E-78 T 12-10-2018 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 97 110 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 32 158 4.5E-44 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 SUPERFAMILY SSF53223 3 175 3.84E-50 T 12-10-2018 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 SUPERFAMILY SSF51735 178 409 7.3E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 Gene3D G3DSA:3.40.50.10860 30 164 3.9E-47 T 12-10-2018 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 SMART SM00839 179 408 3.6E-106 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 209 229 1.2E-19 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 168 190 1.2E-19 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 336 347 1.2E-19 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_1191 68d803e5665221ae4a2e7145e20b9e45 410 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 89 103 1.2E-19 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Amet_2932 7df610000c4704b80d25fb50709dc044 528 Gene3D G3DSA:3.40.190.10 353 490 3.5E-56 T 12-10-2018 Amet_2932 7df610000c4704b80d25fb50709dc044 528 SUPERFAMILY SSF53850 254 527 4.78E-51 T 12-10-2018 Amet_2932 7df610000c4704b80d25fb50709dc044 528 Pfam PF12849 PBP superfamily domain 256 515 8.0E-23 T 12-10-2018 IPR024370 PBP domain Amet_2932 7df610000c4704b80d25fb50709dc044 528 Gene3D G3DSA:3.40.190.10 254 526 3.5E-56 T 12-10-2018 Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 PIRSF PIRSF034834 1 182 2.8E-64 T 12-10-2018 IPR011238 Polyhedral organelle shell protein PduT Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 Gene3D G3DSA:3.30.70.1710 3 79 9.6E-28 T 12-10-2018 Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 SUPERFAMILY SSF143414 95 181 5.49E-23 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 SUPERFAMILY SSF143414 3 93 5.23E-25 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 Gene3D G3DSA:3.30.70.1710 80 181 8.3E-31 T 12-10-2018 Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 SMART SM00877 3 77 1.1E-27 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 SMART SM00877 95 173 3.7E-25 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 Pfam PF00936 BMC domain 96 173 5.7E-20 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 Pfam PF00936 BMC domain 5 76 1.6E-22 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 61 3.0E-27 T 12-10-2018 Amet_0267 f8b57ef6bb21c106aeee28cb720b6fca 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 96 154 3.0E-9 T 12-10-2018 Amet_1630 ddcc8c2311b622551f96cbbce67f257a 200 Pfam PF04286 Protein of unknown function (DUF445) 12 139 1.9E-21 T 12-10-2018 IPR007383 Protein of unknown function DUF445 Amet_1630 ddcc8c2311b622551f96cbbce67f257a 200 Pfam PF04286 Protein of unknown function (DUF445) 132 199 4.8E-14 T 12-10-2018 IPR007383 Protein of unknown function DUF445 Amet_1384 3a39d492e9094475c757775dad2cf081 169 SMART SM00900 75 166 3.4E-6 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_1384 3a39d492e9094475c757775dad2cf081 169 Gene3D G3DSA:3.90.1010.20 58 169 5.5E-33 T 12-10-2018 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 Pfam PF02080 TrkA-C domain 380 445 1.3E-14 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 Pfam PF02080 TrkA-C domain 154 219 8.6E-14 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 SUPERFAMILY SSF116726 135 218 4.71E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 Pfam PF02254 TrkA-N domain 4 123 1.7E-21 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 Pfam PF02254 TrkA-N domain 232 348 8.2E-26 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 Gene3D G3DSA:3.30.70.1450 139 222 4.7E-19 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 Gene3D G3DSA:3.40.50.720 3 136 7.0E-36 T 12-10-2018 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 SUPERFAMILY SSF51735 2 148 4.41E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 SUPERFAMILY SSF116726 362 445 4.58E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 SUPERFAMILY SSF51735 230 373 7.89E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 Gene3D G3DSA:3.40.50.720 231 363 2.6E-39 T 12-10-2018 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 Gene3D G3DSA:3.30.70.1450 365 448 5.5E-20 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 PRINTS PR00335 TrkA potassium uptake protein signature 3 17 1.3E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 PRINTS PR00335 TrkA potassium uptake protein signature 20 34 1.3E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 PRINTS PR00335 TrkA potassium uptake protein signature 303 317 1.3E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 PRINTS PR00335 TrkA potassium uptake protein signature 290 300 1.3E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amet_4416 c790cefb9ffb14eb01dac6698119358b 469 PRINTS PR00335 TrkA potassium uptake protein signature 279 289 1.3E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 Gene3D G3DSA:2.170.190.11 47 143 6.0E-124 T 12-10-2018 Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 Gene3D G3DSA:2.40.340.10 330 399 6.0E-124 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 178 316 3.6E-31 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 SUPERFAMILY SSF53218 179 325 6.02E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 Gene3D G3DSA:3.90.105.10 25 176 6.0E-124 T 12-10-2018 Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 SUPERFAMILY SSF63882 5 178 4.06E-53 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 169 1.2E-41 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 SUPERFAMILY SSF63867 332 404 1.31E-11 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 Gene3D G3DSA:3.40.980.10 177 329 6.0E-124 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 SMART SM00852 182 320 3.4E-41 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 Pfam PF00994 Probable molybdopterin binding domain 182 318 2.3E-27 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_0996 83c07245b49ef1cfc7ebf331552e98f0 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 404 2.9E-10 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Amet_0810 7072daf508dd57643e1bb71b291040ac 640 Pfam PF00005 ABC transporter 350 479 5.8E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0810 7072daf508dd57643e1bb71b291040ac 640 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0810 7072daf508dd57643e1bb71b291040ac 640 SUPERFAMILY SSF52540 316 538 9.83E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0810 7072daf508dd57643e1bb71b291040ac 640 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0810 7072daf508dd57643e1bb71b291040ac 640 Pfam PF00005 ABC transporter 19 196 5.6E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0810 7072daf508dd57643e1bb71b291040ac 640 Gene3D G3DSA:3.40.50.300 296 584 7.2E-62 T 12-10-2018 Amet_0810 7072daf508dd57643e1bb71b291040ac 640 SMART SM00382 28 244 1.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0810 7072daf508dd57643e1bb71b291040ac 640 SMART SM00382 358 524 2.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0810 7072daf508dd57643e1bb71b291040ac 640 Pfam PF16326 ABC transporter C-terminal domain 575 635 9.1E-10 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Amet_0810 7072daf508dd57643e1bb71b291040ac 640 Pfam PF12848 ABC transporter 235 322 1.8E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain Amet_0810 7072daf508dd57643e1bb71b291040ac 640 SUPERFAMILY SSF52540 3 258 2.51E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3020 d631dcf383e13728c078f4f140323f1c 277 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 6 268 61.004 T 12-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein Amet_3020 d631dcf383e13728c078f4f140323f1c 277 Pfam PF03618 Kinase/pyrophosphorylase 8 263 4.2E-101 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Amet_3137 e1879200035cff897289a1ae2fe33b6d 296 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 289 3.6E-21 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Amet_3137 e1879200035cff897289a1ae2fe33b6d 296 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 289 1.6E-75 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Amet_3137 e1879200035cff897289a1ae2fe33b6d 296 Gene3D G3DSA:3.30.70.1350 209 290 3.4E-19 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Amet_3137 e1879200035cff897289a1ae2fe33b6d 296 Pfam PF01545 Cation efflux family 15 207 6.3E-46 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Amet_3137 e1879200035cff897289a1ae2fe33b6d 296 SUPERFAMILY SSF160240 210 289 7.06E-19 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Amet_3137 e1879200035cff897289a1ae2fe33b6d 296 Gene3D G3DSA:1.20.1510.10 10 207 2.6E-62 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Amet_3137 e1879200035cff897289a1ae2fe33b6d 296 SUPERFAMILY SSF161111 7 208 1.05E-56 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Amet_2641 29d231882cf5771fd05060cc6b6586b2 426 Gene3D G3DSA:3.50.50.60 230 416 6.1E-8 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_2641 29d231882cf5771fd05060cc6b6586b2 426 Pfam PF01134 Glucose inhibited division protein A 274 351 9.9E-13 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Amet_2641 29d231882cf5771fd05060cc6b6586b2 426 Pfam PF01134 Glucose inhibited division protein A 3 240 6.4E-23 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Amet_2641 29d231882cf5771fd05060cc6b6586b2 426 Gene3D G3DSA:3.50.50.60 3 183 9.6E-12 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_2641 29d231882cf5771fd05060cc6b6586b2 426 SUPERFAMILY SSF51905 4 344 3.82E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_4140 e04685ca8d7216f3d1f683b56d7ff82c 368 TIGRFAM TIGR03609 S_layer_CsaB: polysaccharide pyruvyl transferase CsaB 3 315 3.7E-86 T 12-10-2018 IPR019896 Polysaccharide pyruvyl transferase, CsaB Amet_4140 e04685ca8d7216f3d1f683b56d7ff82c 368 Pfam PF04230 Polysaccharide pyruvyl transferase 14 297 1.3E-42 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase Amet_4140 e04685ca8d7216f3d1f683b56d7ff82c 368 SUPERFAMILY SSF53756 12 295 1.88E-5 T 12-10-2018 Amet_2350 42a82bff24c4f29417f54c606befe4be 557 SUPERFAMILY SSF56112 96 335 9.21E-29 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Amet_2350 42a82bff24c4f29417f54c606befe4be 557 Pfam PF03109 ABC1 family 114 231 1.3E-37 T 12-10-2018 IPR004147 UbiB domain Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 Pfam PF00871 Acetokinase family 8 356 3.2E-65 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 Gene3D G3DSA:3.30.420.40 140 334 1.2E-149 T 12-10-2018 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 SUPERFAMILY SSF53067 7 175 1.48E-68 T 12-10-2018 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 SUPERFAMILY SSF53067 121 350 1.51E-51 T 12-10-2018 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 PIRSF PIRSF036458 4 358 3.6E-158 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 354 2.3E-157 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 Gene3D G3DSA:3.30.420.40 7 357 1.2E-149 T 12-10-2018 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 Hamap MF_00542 Probable butyrate kinase [buk]. 1 358 157.843 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 PRINTS PR00471 Acetate kinase family signature 8 19 5.4E-18 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 PRINTS PR00471 Acetate kinase family signature 276 289 5.4E-18 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 PRINTS PR00471 Acetate kinase family signature 345 357 5.4E-18 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 PRINTS PR00471 Acetate kinase family signature 299 315 5.4E-18 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_4431 8a0c426ff10c9128d599834acc6d1b6f 358 PRINTS PR00471 Acetate kinase family signature 182 203 5.4E-18 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Amet_3825 c912373a822485f56131ef88debe06fa 199 SUPERFAMILY SSF143414 1 98 1.22E-28 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_3825 c912373a822485f56131ef88debe06fa 199 SMART SM00877 2 80 3.9E-32 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3825 c912373a822485f56131ef88debe06fa 199 Gene3D G3DSA:3.30.70.1710 1 112 3.4E-37 T 12-10-2018 Amet_3825 c912373a822485f56131ef88debe06fa 199 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 43 5.0E-15 T 12-10-2018 Amet_3825 c912373a822485f56131ef88debe06fa 199 Pfam PF00936 BMC domain 3 80 8.6E-25 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_4589 039f12b9faa49b981299661bb52984d1 214 Pfam PF04961 Formiminotransferase-cyclodeaminase 7 191 1.8E-67 T 12-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Amet_4589 039f12b9faa49b981299661bb52984d1 214 SUPERFAMILY SSF101262 3 212 1.22E-59 T 12-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Amet_4589 039f12b9faa49b981299661bb52984d1 214 Gene3D G3DSA:1.20.120.680 7 212 3.8E-72 T 12-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Amet_4742 8ca133895c89f973a072d62277d9d5de 298 SUPERFAMILY SSF161098 8 298 7.29E-56 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4742 8ca133895c89f973a072d62277d9d5de 298 Gene3D G3DSA:1.10.3720.10 3 289 3.1E-58 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4742 8ca133895c89f973a072d62277d9d5de 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 287 1.8E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1667 e783b2f32fe33720781098521cdcb4c3 343 Gene3D G3DSA:3.100.10.20 6 82 2.6E-17 T 12-10-2018 Amet_1667 e783b2f32fe33720781098521cdcb4c3 343 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 328 25.814 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Amet_1667 e783b2f32fe33720781098521cdcb4c3 343 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 7 335 2.0E-86 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Amet_1667 e783b2f32fe33720781098521cdcb4c3 343 Gene3D G3DSA:1.20.120.920 86 342 1.5E-72 T 12-10-2018 Amet_1667 e783b2f32fe33720781098521cdcb4c3 343 TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG 3 342 3.2E-149 T 12-10-2018 IPR019856 CRISPR-associated protein Cas1, DVULG subtype GO:0004520|GO:0043571|GO:0046872 Amet_1667 e783b2f32fe33720781098521cdcb4c3 343 Pfam PF01867 CRISPR associated protein Cas1 8 297 2.6E-100 T 12-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Amet_2063 4f2d79d91255c50c7b9a3479f13f70aa 298 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 72 2.4E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amet_2063 4f2d79d91255c50c7b9a3479f13f70aa 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 297 2.4E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2063 4f2d79d91255c50c7b9a3479f13f70aa 298 SUPERFAMILY SSF161098 91 284 8.24E-30 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2063 4f2d79d91255c50c7b9a3479f13f70aa 298 Gene3D G3DSA:1.10.3720.10 85 298 1.0E-23 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4668 5fe65a0ccba167d2a589c7845c2956d5 331 Pfam PF12698 ABC-2 family transporter protein 101 321 5.7E-11 T 12-10-2018 Amet_1829 1c1a7ee404adf18aa629ddea0a12b316 99 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 2 98 1.3E-31 T 12-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 Amet_1829 1c1a7ee404adf18aa629ddea0a12b316 99 Gene3D G3DSA:3.40.30.10 1 99 1.6E-34 T 12-10-2018 Amet_2062 dcc967d85a5469e7be15cdc41cbfbcb3 306 Gene3D G3DSA:1.10.3720.10 85 298 1.5E-25 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2062 dcc967d85a5469e7be15cdc41cbfbcb3 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 305 2.9E-40 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2062 dcc967d85a5469e7be15cdc41cbfbcb3 306 SUPERFAMILY SSF161098 90 290 2.29E-21 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 SUPERFAMILY SSF52540 320 537 4.51E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 SUPERFAMILY SSF52540 11 237 4.0E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 Gene3D G3DSA:3.40.50.300 3 284 5.8E-64 T 12-10-2018 Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 Pfam PF00005 ABC transporter 349 477 1.2E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 Pfam PF00005 ABC transporter 19 191 1.6E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 SMART SM00382 28 236 9.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 SMART SM00382 357 522 1.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 Gene3D G3DSA:3.40.50.300 296 556 2.3E-55 T 12-10-2018 Amet_1451 ec9126547b512beb284fa8ddafce9f66 633 Pfam PF12848 ABC transporter 230 318 5.4E-23 T 12-10-2018 IPR032781 ABC-transporter extension domain Amet_1270 9520849e3323b52be761cec59c359dde 150 Pfam PF12732 YtxH-like protein 36 106 1.2E-15 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH Amet_3535 06ee5b053733fbe0910124ef77526b92 245 Gene3D G3DSA:1.10.10.60 189 243 8.1E-18 T 12-10-2018 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 Pfam PF00072 Response regulator receiver domain 5 113 4.2E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 SUPERFAMILY SSF52172 1 127 8.82E-37 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3535 06ee5b053733fbe0910124ef77526b92 245 Gene3D G3DSA:3.40.50.2300 1 135 2.5E-37 T 12-10-2018 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 SUPERFAMILY SSF46689 193 241 5.82E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 SUPERFAMILY SSF46689 140 189 9.86E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 Pfam PF12833 Helix-turn-helix domain 162 241 2.6E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 239 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 208 223 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 193 235 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 Gene3D G3DSA:1.10.10.60 138 188 7.1E-19 T 12-10-2018 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 SMART SM00342 156 239 5.3E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Amet_3535 06ee5b053733fbe0910124ef77526b92 245 SMART SM00448 2 115 9.4E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2306 bf0e186318b029c4b094ecee5e759984 191 SUPERFAMILY SSF55890 11 130 1.31E-17 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Amet_2306 bf0e186318b029c4b094ecee5e759984 191 Gene3D G3DSA:1.10.287.130 2 67 4.9E-12 T 12-10-2018 Amet_2306 bf0e186318b029c4b094ecee5e759984 191 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 7 67 3.6E-21 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain Amet_2416 338b2e03c79c529faa516a75da6d1d08 93 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 5 87 5.1E-16 T 12-10-2018 IPR006450 Phage protein of unkonwn function Amet_2416 338b2e03c79c529faa516a75da6d1d08 93 Gene3D G3DSA:1.10.3230.30 2 93 1.7E-8 T 12-10-2018 Amet_2416 338b2e03c79c529faa516a75da6d1d08 93 Pfam PF05135 Phage gp6-like head-tail connector protein 5 77 6.0E-16 T 12-10-2018 IPR021146 Phage gp6-like head-tail connector protein Amet_3755 90b068716817770f0bba048d12a6497a 484 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Amet_3755 90b068716817770f0bba048d12a6497a 484 Gene3D G3DSA:3.40.50.300 205 370 3.8E-50 T 12-10-2018 Amet_3755 90b068716817770f0bba048d12a6497a 484 SMART SM00487 23 220 1.0E-60 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_3755 90b068716817770f0bba048d12a6497a 484 Pfam PF03880 DbpA RNA binding domain 408 477 6.1E-19 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Amet_3755 90b068716817770f0bba048d12a6497a 484 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 480 66.752 T 12-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 Amet_3755 90b068716817770f0bba048d12a6497a 484 Pfam PF00270 DEAD/DEAH box helicase 28 193 9.2E-49 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amet_3755 90b068716817770f0bba048d12a6497a 484 Pfam PF00271 Helicase conserved C-terminal domain 229 336 6.8E-31 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_3755 90b068716817770f0bba048d12a6497a 484 Gene3D G3DSA:3.30.70.330 406 481 6.6E-27 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Amet_3755 90b068716817770f0bba048d12a6497a 484 SUPERFAMILY SSF52540 71 358 3.73E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3755 90b068716817770f0bba048d12a6497a 484 Gene3D G3DSA:3.40.50.300 2 204 4.1E-73 T 12-10-2018 Amet_3755 90b068716817770f0bba048d12a6497a 484 SMART SM00490 256 337 3.0E-33 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_3176 9f8698169f6b00f4dd3b2116be8199d9 299 Pfam PF08664 YcbB domain 160 292 6.2E-45 T 12-10-2018 IPR013972 YcbB domain Amet_3176 9f8698169f6b00f4dd3b2116be8199d9 299 SUPERFAMILY SSF52172 7 128 1.31E-23 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3176 9f8698169f6b00f4dd3b2116be8199d9 299 Gene3D G3DSA:3.40.50.12740 5 184 3.7E-23 T 12-10-2018 Amet_3176 9f8698169f6b00f4dd3b2116be8199d9 299 Pfam PF00072 Response regulator receiver domain 6 112 1.2E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3176 9f8698169f6b00f4dd3b2116be8199d9 299 SMART SM00448 3 116 1.5E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4184 2b533b0098d1f457187d4d921d71df78 251 Pfam PF04794 YdjC-like protein 3 237 4.5E-67 T 12-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like Amet_4184 2b533b0098d1f457187d4d921d71df78 251 SUPERFAMILY SSF88713 1 249 7.78E-77 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amet_4184 2b533b0098d1f457187d4d921d71df78 251 Gene3D G3DSA:3.20.20.370 1 250 7.4E-85 T 12-10-2018 Amet_1348 ffd1ade15565c135f1281b00647086ec 482 Gene3D G3DSA:3.50.50.60 43 479 7.4E-167 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1348 ffd1ade15565c135f1281b00647086ec 482 SUPERFAMILY SSF51905 32 481 7.37E-66 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1348 ffd1ade15565c135f1281b00647086ec 482 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 44 477 1.2E-151 T 12-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 Amet_1348 ffd1ade15565c135f1281b00647086ec 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 66 4.3E-7 T 12-10-2018 Amet_1348 ffd1ade15565c135f1281b00647086ec 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 469 482 4.3E-7 T 12-10-2018 Amet_1348 ffd1ade15565c135f1281b00647086ec 482 Pfam PF00890 FAD binding domain 44 465 1.4E-101 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_1348 ffd1ade15565c135f1281b00647086ec 482 Gene3D G3DSA:3.90.700.10 277 421 7.4E-167 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_1348 ffd1ade15565c135f1281b00647086ec 482 SUPERFAMILY SSF56425 280 425 7.03E-44 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_1348 ffd1ade15565c135f1281b00647086ec 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 281 5.4E-7 T 12-10-2018 Amet_1348 ffd1ade15565c135f1281b00647086ec 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 45 64 5.4E-7 T 12-10-2018 Amet_1348 ffd1ade15565c135f1281b00647086ec 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 429 451 5.4E-7 T 12-10-2018 Amet_2524 5fd9d0d8eb5d023d58d789bb49858b05 390 SUPERFAMILY SSF53649 1 387 4.19E-77 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Amet_2524 5fd9d0d8eb5d023d58d789bb49858b05 390 PIRSF PIRSF001491 1 389 2.0E-158 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Amet_2524 5fd9d0d8eb5d023d58d789bb49858b05 390 SUPERFAMILY SSF143856 99 214 5.23E-49 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Amet_2524 5fd9d0d8eb5d023d58d789bb49858b05 390 TIGRFAM TIGR01696 deoB: phosphopentomutase 4 381 3.7E-165 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Amet_2524 5fd9d0d8eb5d023d58d789bb49858b05 390 Pfam PF01676 Metalloenzyme superfamily 4 376 1.1E-40 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Amet_2524 5fd9d0d8eb5d023d58d789bb49858b05 390 Hamap MF_00740 Phosphopentomutase [deoB]. 2 385 52.58 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Amet_2524 5fd9d0d8eb5d023d58d789bb49858b05 390 Gene3D G3DSA:3.30.70.1250 97 214 3.4E-168 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Amet_2524 5fd9d0d8eb5d023d58d789bb49858b05 390 Gene3D G3DSA:3.40.720.10 4 384 3.4E-168 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Amet_1518 e2cb909039dcc7602a750139f63f6f31 224 SUPERFAMILY SSF52172 2 166 3.84E-45 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1518 e2cb909039dcc7602a750139f63f6f31 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 3.0E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1518 e2cb909039dcc7602a750139f63f6f31 224 SMART SM00862 145 220 5.3E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1518 e2cb909039dcc7602a750139f63f6f31 224 Pfam PF00072 Response regulator receiver domain 4 112 7.4E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1518 e2cb909039dcc7602a750139f63f6f31 224 Gene3D G3DSA:1.10.10.10 127 223 2.3E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1518 e2cb909039dcc7602a750139f63f6f31 224 Gene3D G3DSA:3.40.50.2300 1 126 1.3E-40 T 12-10-2018 Amet_1518 e2cb909039dcc7602a750139f63f6f31 224 SMART SM00448 2 112 3.7E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3148 d185e58176be6edafec8d90a450a9543 422 SUPERFAMILY SSF51338 30 420 3.43E-23 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_3148 d185e58176be6edafec8d90a450a9543 422 TIGRFAM TIGR01224 hutI: imidazolonepropionase 34 413 2.3E-148 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_3148 d185e58176be6edafec8d90a450a9543 422 SUPERFAMILY SSF51556 76 376 7.79E-86 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_3148 d185e58176be6edafec8d90a450a9543 422 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 415 43.057 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Amet_3148 d185e58176be6edafec8d90a450a9543 422 Pfam PF01979 Amidohydrolase family 73 415 1.9E-23 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_3148 d185e58176be6edafec8d90a450a9543 422 Gene3D G3DSA:3.20.20.140 77 375 8.2E-176 T 12-10-2018 Amet_3148 d185e58176be6edafec8d90a450a9543 422 Gene3D G3DSA:2.30.40.10 8 413 8.2E-176 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_2420 eabace6afd871471f424e02ad7389776 351 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 218 281 1.0E-4 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain Amet_2420 eabace6afd871471f424e02ad7389776 351 Gene3D G3DSA:1.10.10.2290 143 218 1.5E-46 T 12-10-2018 Amet_2420 eabace6afd871471f424e02ad7389776 351 Gene3D G3DSA:3.40.50.11790 84 248 1.5E-46 T 12-10-2018 Amet_2420 eabace6afd871471f424e02ad7389776 351 Pfam PF17482 Phage tail sheath C-terminal domain 227 350 8.1E-26 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain Amet_2420 eabace6afd871471f424e02ad7389776 351 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 82 219 1.6E-8 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain Amet_1967 07f524497fcdfaac1739ff0dbdb3abb2 585 Pfam PF10145 Phage-related minor tail protein 118 306 5.3E-14 T 12-10-2018 IPR010090 Phage tail tape measure protein Amet_0430 07f524497fcdfaac1739ff0dbdb3abb2 585 Pfam PF10145 Phage-related minor tail protein 118 306 5.3E-14 T 12-10-2018 IPR010090 Phage tail tape measure protein Amet_4351 07f524497fcdfaac1739ff0dbdb3abb2 585 Pfam PF10145 Phage-related minor tail protein 118 306 5.3E-14 T 12-10-2018 IPR010090 Phage tail tape measure protein Amet_4114 f9176b354e92013bdcfd573b54496c79 327 Gene3D G3DSA:3.40.50.10440 12 181 1.9E-68 T 12-10-2018 Amet_4114 f9176b354e92013bdcfd573b54496c79 327 Pfam PF02733 Dak1 domain 17 324 1.8E-131 T 12-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Amet_4114 f9176b354e92013bdcfd573b54496c79 327 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 324 7.2E-146 T 12-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 Amet_4114 f9176b354e92013bdcfd573b54496c79 327 SUPERFAMILY SSF82549 1 326 1.12E-126 T 12-10-2018 Amet_4114 f9176b354e92013bdcfd573b54496c79 327 Gene3D G3DSA:3.30.1180.20 182 327 6.7E-52 T 12-10-2018 Amet_3786 8e10658e53c56f926062be64c3cafe1b 430 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 420 3.7E-110 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_3786 8e10658e53c56f926062be64c3cafe1b 430 PIRSF PIRSF006066 6 430 9.7E-143 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_3786 8e10658e53c56f926062be64c3cafe1b 430 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 426 7.9E-125 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_1349 34e3a79096f7d5070d9c3ed0996de0e1 269 Gene3D G3DSA:3.40.1190.20 1 268 1.7E-28 T 12-10-2018 IPR029056 Ribokinase-like Amet_1349 34e3a79096f7d5070d9c3ed0996de0e1 269 SUPERFAMILY SSF53613 1 259 3.27E-49 T 12-10-2018 IPR029056 Ribokinase-like Amet_1349 34e3a79096f7d5070d9c3ed0996de0e1 269 Pfam PF00294 pfkB family carbohydrate kinase 177 258 2.1E-12 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Amet_1121 8b23fc0e23310f2d5ddcbaa2aeddd1df 264 SMART SM00382 34 229 2.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1121 8b23fc0e23310f2d5ddcbaa2aeddd1df 264 Pfam PF00005 ABC transporter 26 181 2.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1121 8b23fc0e23310f2d5ddcbaa2aeddd1df 264 Gene3D G3DSA:3.40.50.300 3 263 3.9E-79 T 12-10-2018 Amet_1121 8b23fc0e23310f2d5ddcbaa2aeddd1df 264 SUPERFAMILY SSF52540 5 252 2.39E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1121 8b23fc0e23310f2d5ddcbaa2aeddd1df 264 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 Gene3D G3DSA:3.40.50.10490 2 62 1.1E-8 T 12-10-2018 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 Gene3D G3DSA:3.40.50.10490 227 417 2.1E-146 T 12-10-2018 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 Gene3D G3DSA:3.40.50.10490 63 226 2.1E-146 T 12-10-2018 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 2.3E-27 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 2.3E-27 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 2.3E-27 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 2.3E-27 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 2.3E-27 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 2.3E-27 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 SUPERFAMILY SSF53697 5 447 8.35E-141 T 12-10-2018 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 Pfam PF00342 Phosphoglucose isomerase 76 425 4.7E-27 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.156 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1375 2abc56c8bcb18afa7ab3e30aca131e75 450 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Amet_1189 72740f318c8ed304028080e6b799bad2 282 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 5 265 38.281 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Amet_1189 72740f318c8ed304028080e6b799bad2 282 SUPERFAMILY SSF51621 5 265 1.77E-96 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amet_1189 72740f318c8ed304028080e6b799bad2 282 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 5 266 1.2E-92 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Amet_1189 72740f318c8ed304028080e6b799bad2 282 Pfam PF02548 Ketopantoate hydroxymethyltransferase 6 260 3.1E-103 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Amet_1189 72740f318c8ed304028080e6b799bad2 282 PIRSF PIRSF000388 1 268 4.1E-115 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Amet_1189 72740f318c8ed304028080e6b799bad2 282 Gene3D G3DSA:3.20.20.60 4 276 7.5E-111 T 12-10-2018 Amet_1525 2d8661ddc0ab51e3bf9d4ea8b6dc8e82 873 Gene3D G3DSA:3.50.30.10 771 872 3.8E-30 T 12-10-2018 Amet_1525 2d8661ddc0ab51e3bf9d4ea8b6dc8e82 873 Pfam PF00391 PEP-utilising enzyme, mobile domain 797 868 4.9E-21 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Amet_1525 2d8661ddc0ab51e3bf9d4ea8b6dc8e82 873 Gene3D G3DSA:3.30.470.20 185 313 8.5E-43 T 12-10-2018 Amet_1525 2d8661ddc0ab51e3bf9d4ea8b6dc8e82 873 Gene3D G3DSA:3.30.1490.20 1 184 2.3E-67 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_1525 2d8661ddc0ab51e3bf9d4ea8b6dc8e82 873 SUPERFAMILY SSF56059 1 347 6.95E-93 T 12-10-2018 Amet_1525 2d8661ddc0ab51e3bf9d4ea8b6dc8e82 873 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 313 1.9E-92 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Amet_1525 2d8661ddc0ab51e3bf9d4ea8b6dc8e82 873 SUPERFAMILY SSF52009 767 871 8.37E-27 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Amet_3939 a9419ad02a8a0ec8ab238328e5a2bcff 246 SUPERFAMILY SSF46894 69 117 3.4E-7 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_3939 a9419ad02a8a0ec8ab238328e5a2bcff 246 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 177 244 6.6E-26 T 12-10-2018 IPR018656 Domain of unknown function DUF2087 Amet_3939 a9419ad02a8a0ec8ab238328e5a2bcff 246 Gene3D G3DSA:1.10.10.10 63 129 2.9E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0726 93bdf639cafe3a8762185ebff259aa1d 164 SUPERFAMILY SSF140566 4 135 6.41E-18 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Amet_0726 93bdf639cafe3a8762185ebff259aa1d 164 Gene3D G3DSA:1.20.58.300 2 135 4.4E-8 T 12-10-2018 Amet_0726 93bdf639cafe3a8762185ebff259aa1d 164 Pfam PF05130 FlgN protein 1 152 4.6E-29 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Amet_3509 a4ab4fd9a5ed8976d0353864cf40566f 131 Pfam PF02566 OsmC-like protein 33 127 1.3E-16 T 12-10-2018 IPR003718 OsmC/Ohr family Amet_3509 a4ab4fd9a5ed8976d0353864cf40566f 131 SUPERFAMILY SSF82784 13 129 1.11E-26 T 12-10-2018 IPR036102 OsmC/Ohr superfamily Amet_3509 a4ab4fd9a5ed8976d0353864cf40566f 131 Gene3D G3DSA:3.30.300.20 5 130 1.2E-18 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 Pfam PF00005 ABC transporter 45 191 3.5E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 SUPERFAMILY SSF52540 39 270 1.36E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 Gene3D G3DSA:3.40.50.300 27 268 1.7E-71 T 12-10-2018 Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 Pfam PF00571 CBS domain 341 390 1.5E-5 T 12-10-2018 IPR000644 CBS domain Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 35 390 4.8E-147 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 SUPERFAMILY SSF54631 273 391 1.64E-18 T 12-10-2018 Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 SMART SM00116 281 330 3.9 T 12-10-2018 IPR000644 CBS domain Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 SMART SM00116 343 390 0.07 T 12-10-2018 IPR000644 CBS domain Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 Gene3D G3DSA:3.10.580.10 277 391 1.4E-14 T 12-10-2018 Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2808 97e33be0f2f5a24d5969e7c939ed2f61 399 SMART SM00382 52 249 2.9E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3328 09061660da1b6741a3e26244fbb077a6 347 SUPERFAMILY SSF52540 3 248 1.9E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3328 09061660da1b6741a3e26244fbb077a6 347 Pfam PF00005 ABC transporter 24 179 5.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3328 09061660da1b6741a3e26244fbb077a6 347 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 315 3.9E-24 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_3328 09061660da1b6741a3e26244fbb077a6 347 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3328 09061660da1b6741a3e26244fbb077a6 347 Gene3D G3DSA:3.40.50.300 1 331 6.5E-93 T 12-10-2018 Amet_3328 09061660da1b6741a3e26244fbb077a6 347 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 295 2.5E-14 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_3328 09061660da1b6741a3e26244fbb077a6 347 SMART SM00382 32 236 4.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0343 5e0a8fd40ce232dad94da79de0680aef 377 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 367 1.8E-122 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Amet_0343 5e0a8fd40ce232dad94da79de0680aef 377 Gene3D G3DSA:3.40.50.2000 192 354 2.2E-147 T 12-10-2018 Amet_0343 5e0a8fd40ce232dad94da79de0680aef 377 Gene3D G3DSA:3.40.50.2000 6 365 2.2E-147 T 12-10-2018 Amet_0343 5e0a8fd40ce232dad94da79de0680aef 377 SUPERFAMILY SSF53756 3 370 9.03E-134 T 12-10-2018 Amet_0343 5e0a8fd40ce232dad94da79de0680aef 377 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 369 5.9E-157 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Amet_3416 c2e638ea27b918cb754c1761b90e2e4f 151 Pfam PF02310 B12 binding domain 5 99 1.0E-12 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_3416 c2e638ea27b918cb754c1761b90e2e4f 151 SUPERFAMILY SSF52242 4 136 7.33E-35 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_3416 c2e638ea27b918cb754c1761b90e2e4f 151 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 137 39.123 T 12-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Amet_3416 c2e638ea27b918cb754c1761b90e2e4f 151 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 3 137 1.8E-18 T 12-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_3416 c2e638ea27b918cb754c1761b90e2e4f 151 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 4 134 6.9E-65 T 12-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Amet_3416 c2e638ea27b918cb754c1761b90e2e4f 151 Gene3D G3DSA:3.40.50.280 2 149 2.8E-39 T 12-10-2018 Amet_1689 e924a74ae1ebffe71d96faf5dbcb880f 619 PIRSF PIRSF018968 1 617 3.2E-116 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 Amet_1689 e924a74ae1ebffe71d96faf5dbcb880f 619 Pfam PF02687 FtsX-like permease family 85 171 7.7E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_3669 a232302d41f924f755d45f3316c1db00 731 SUPERFAMILY SSF51445 86 356 1.85E-19 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_3669 a232302d41f924f755d45f3316c1db00 731 Pfam PF02638 Glycosyl hydrolase-like 10 53 376 4.0E-87 T 12-10-2018 IPR003790 Glycosyl hydrolase-like 10 Amet_3669 a232302d41f924f755d45f3316c1db00 731 Pfam PF00395 S-layer homology domain 551 593 1.8E-10 T 12-10-2018 IPR001119 S-layer homology domain Amet_3669 a232302d41f924f755d45f3316c1db00 731 Pfam PF00395 S-layer homology domain 679 721 8.8E-6 T 12-10-2018 IPR001119 S-layer homology domain Amet_3669 a232302d41f924f755d45f3316c1db00 731 Pfam PF00395 S-layer homology domain 612 654 2.5E-6 T 12-10-2018 IPR001119 S-layer homology domain Amet_3669 a232302d41f924f755d45f3316c1db00 731 Gene3D G3DSA:3.20.20.70 133 274 3.1E-8 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2520 87bdd6316d833394b80217145c2c2400 366 Pfam PF12982 Protein of unknown function (DUF3866) 33 350 2.6E-136 T 12-10-2018 IPR024479 Protein of unknown function DUF3866 Amet_3735 b8a731f353e3997d1acac0615eb40948 272 Pfam PF14512 Putative TM nitroreductase 4 236 9.9E-31 T 12-10-2018 IPR029478 Putative nitroreductase TM1586 Amet_3735 b8a731f353e3997d1acac0615eb40948 272 Gene3D G3DSA:3.40.109.10 178 239 2.3E-5 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_3735 b8a731f353e3997d1acac0615eb40948 272 SUPERFAMILY SSF55469 3 142 4.58E-21 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_3735 b8a731f353e3997d1acac0615eb40948 272 SUPERFAMILY SSF55469 183 248 5.63E-8 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_3735 b8a731f353e3997d1acac0615eb40948 272 Gene3D G3DSA:3.40.109.10 2 177 4.6E-23 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_1298 c787e7d0524b0afbcb7468a8e258da3b 404 SMART SM00849 130 325 6.3E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_1298 c787e7d0524b0afbcb7468a8e258da3b 404 SUPERFAMILY SSF56281 121 367 1.44E-53 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_1298 c787e7d0524b0afbcb7468a8e258da3b 404 Gene3D G3DSA:3.60.15.10 117 367 8.1E-74 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_1298 c787e7d0524b0afbcb7468a8e258da3b 404 Pfam PF00753 Metallo-beta-lactamase superfamily 128 324 3.3E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_0639 e669ec39e9cc1d262bbca712e2829796 129 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 30 108 6.5E-6 T 12-10-2018 Amet_0639 e669ec39e9cc1d262bbca712e2829796 129 SUPERFAMILY SSF52833 33 122 2.57E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_0639 e669ec39e9cc1d262bbca712e2829796 129 Gene3D G3DSA:3.40.30.10 28 126 1.9E-17 T 12-10-2018 Amet_3657 e8ffb107ab26026bde5c719edf8a5007 280 Gene3D G3DSA:3.40.630.30 126 260 1.7E-13 T 12-10-2018 Amet_3657 e8ffb107ab26026bde5c719edf8a5007 280 Pfam PF13527 Acetyltransferase (GNAT) domain 129 230 1.8E-7 T 12-10-2018 Amet_3657 e8ffb107ab26026bde5c719edf8a5007 280 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 16 278 1.3E-82 T 12-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 Amet_3657 e8ffb107ab26026bde5c719edf8a5007 280 SUPERFAMILY SSF55729 125 278 8.68E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1076 1613af72fbf511f02ac21140795ac1f5 294 SUPERFAMILY SSF103481 189 277 1.96E-11 T 12-10-2018 Amet_1076 1613af72fbf511f02ac21140795ac1f5 294 SUPERFAMILY SSF103481 40 138 2.62E-12 T 12-10-2018 Amet_1076 1613af72fbf511f02ac21140795ac1f5 294 Pfam PF00892 EamA-like transporter family 145 277 1.4E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_1076 1613af72fbf511f02ac21140795ac1f5 294 Pfam PF00892 EamA-like transporter family 7 136 8.1E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_1901 b11fcf4e5fb154dad0c218f2c1e08c99 197 SUPERFAMILY SSF49367 120 192 6.54E-18 T 12-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Amet_1901 b11fcf4e5fb154dad0c218f2c1e08c99 197 SUPERFAMILY SSF47413 3 70 4.16E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_1901 b11fcf4e5fb154dad0c218f2c1e08c99 197 Gene3D G3DSA:2.60.40.730 82 192 2.8E-18 T 12-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Amet_1901 b11fcf4e5fb154dad0c218f2c1e08c99 197 Pfam PF01381 Helix-turn-helix 10 61 7.3E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1901 b11fcf4e5fb154dad0c218f2c1e08c99 197 SMART SM00530 9 64 4.6E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1901 b11fcf4e5fb154dad0c218f2c1e08c99 197 Gene3D G3DSA:1.10.260.40 3 81 1.3E-15 T 12-10-2018 Amet_2417 f1032f0ef8523d8569421506b290b565 109 Gene3D G3DSA:2.40.10.270 1 109 1.4E-9 T 12-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily Amet_2417 f1032f0ef8523d8569421506b290b565 109 Pfam PF05521 Phage head-tail joining protein 7 104 3.3E-13 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor Amet_2417 f1032f0ef8523d8569421506b290b565 109 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 22 106 1.2E-8 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor Amet_3357 375ca8abea7cc044adde6a7c1a273b9a 296 Pfam PF04439 Streptomycin adenylyltransferase 1 278 9.6E-107 T 12-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase Amet_3357 375ca8abea7cc044adde6a7c1a273b9a 296 PIRSF PIRSF000812 1 282 2.0E-90 T 12-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase Amet_3357 375ca8abea7cc044adde6a7c1a273b9a 296 SUPERFAMILY SSF81301 1 132 4.9E-44 T 12-10-2018 Amet_3357 375ca8abea7cc044adde6a7c1a273b9a 296 Gene3D G3DSA:3.30.460.10 9 148 5.8E-43 T 12-10-2018 Amet_3357 375ca8abea7cc044adde6a7c1a273b9a 296 SUPERFAMILY SSF81631 139 280 9.42E-49 T 12-10-2018 Amet_3357 375ca8abea7cc044adde6a7c1a273b9a 296 Gene3D G3DSA:1.20.120.330 149 291 5.7E-38 T 12-10-2018 Amet_4048 e14e392a1700dfe73ac60f8189c54abe 94 SMART SM00990 1 81 1.2E-22 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 Amet_4048 e14e392a1700dfe73ac60f8189c54abe 94 Gene3D G3DSA:3.40.1350.10 1 90 2.3E-26 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Amet_0470 bdccdbb916fa9e4576989e167edf738f 263 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 166 261 9.8E-16 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Amet_0470 bdccdbb916fa9e4576989e167edf738f 263 Gene3D G3DSA:3.30.390.50 163 263 9.2E-15 T 12-10-2018 Amet_0470 bdccdbb916fa9e4576989e167edf738f 263 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 149 2.5E-21 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Amet_0470 bdccdbb916fa9e4576989e167edf738f 263 SUPERFAMILY SSF55447 163 261 3.66E-14 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Amet_0470 bdccdbb916fa9e4576989e167edf738f 263 SUPERFAMILY SSF56176 6 156 2.02E-25 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_0470 bdccdbb916fa9e4576989e167edf738f 263 Gene3D G3DSA:3.30.465.10 4 162 1.3E-24 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_0470 bdccdbb916fa9e4576989e167edf738f 263 SMART SM01092 165 261 1.2E-11 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Amet_2281 2ac3a46252d6053946dcc327214e41a8 317 Pfam PF03116 NQR2, RnfD, RnfE family 7 310 1.7E-116 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Amet_2281 2ac3a46252d6053946dcc327214e41a8 317 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 5 312 24.349 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Amet_2281 2ac3a46252d6053946dcc327214e41a8 317 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 10 311 2.2E-96 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Amet_0543 569ef5c6e9d282dafc51443dd75fd992 385 Pfam PF07907 YibE/F-like protein 127 367 7.1E-81 T 12-10-2018 IPR012507 YibE/F-like Amet_2047 3e8d1e962d944a3d2f23e08ec8dab876 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 269 1.3E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2047 3e8d1e962d944a3d2f23e08ec8dab876 272 Gene3D G3DSA:1.10.3720.10 63 268 1.7E-18 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2047 3e8d1e962d944a3d2f23e08ec8dab876 272 SUPERFAMILY SSF161098 76 253 2.88E-22 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0027 e37bcec30ca4fe172dbe119aaa86ff56 211 SUPERFAMILY SSF64307 10 79 3.53E-15 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_0027 e37bcec30ca4fe172dbe119aaa86ff56 211 SUPERFAMILY SSF75169 112 210 1.53E-12 T 12-10-2018 IPR027396 DsrEFH-like Amet_0027 e37bcec30ca4fe172dbe119aaa86ff56 211 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 16 40 - T 12-10-2018 IPR001455 TusA-like domain Amet_0027 e37bcec30ca4fe172dbe119aaa86ff56 211 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 16 211 3.6E-68 T 12-10-2018 IPR019870 Selenium metabolism protein YedF Amet_0027 e37bcec30ca4fe172dbe119aaa86ff56 211 Pfam PF01206 Sulfurtransferase TusA 14 77 1.6E-15 T 12-10-2018 IPR001455 TusA-like domain Amet_0027 e37bcec30ca4fe172dbe119aaa86ff56 211 Gene3D G3DSA:3.30.110.40 14 93 7.1E-23 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_3164 990e302a1528ed6033ef879498c06019 211 Gene3D G3DSA:3.30.70.270 7 167 9.4E-37 T 12-10-2018 Amet_3164 990e302a1528ed6033ef879498c06019 211 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 14 160 1.0E-28 T 12-10-2018 IPR000160 GGDEF domain Amet_3164 990e302a1528ed6033ef879498c06019 211 Pfam PF00990 Diguanylate cyclase, GGDEF domain 23 156 1.3E-27 T 12-10-2018 IPR000160 GGDEF domain Amet_3164 990e302a1528ed6033ef879498c06019 211 SMART SM00267 2 160 1.6E-17 T 12-10-2018 IPR000160 GGDEF domain Amet_3164 990e302a1528ed6033ef879498c06019 211 SUPERFAMILY SSF55073 20 161 7.06E-31 T 12-10-2018 IPR029787 Nucleotide cyclase Amet_0690 b36c5b9224a0153e742e1426f5cb6b49 267 SUPERFAMILY SSF102198 10 263 4.97E-48 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amet_0690 b36c5b9224a0153e742e1426f5cb6b49 267 Gene3D G3DSA:3.50.30.50 7 263 1.4E-40 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amet_0690 b36c5b9224a0153e742e1426f5cb6b49 267 Pfam PF04199 Putative cyclase 13 170 3.2E-33 T 12-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amet_2367 ff6fefa1a0bd2da85d7dbd916238d72d 348 Gene3D G3DSA:3.40.50.720 1 157 1.0E-29 T 12-10-2018 Amet_2367 ff6fefa1a0bd2da85d7dbd916238d72d 348 SUPERFAMILY SSF51735 3 167 6.68E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_2367 ff6fefa1a0bd2da85d7dbd916238d72d 348 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 104 7.8E-8 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Amet_1838 ae942b21fb352d1c6f1198743717393a 379 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 3 378 2.1E-143 T 12-10-2018 IPR010969 Cysteine desulfurase-related, unknown function Amet_1838 ae942b21fb352d1c6f1198743717393a 379 Gene3D G3DSA:3.40.640.10 17 268 3.7E-116 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_1838 ae942b21fb352d1c6f1198743717393a 379 Gene3D G3DSA:3.90.1150.10 3 372 3.7E-116 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_1838 ae942b21fb352d1c6f1198743717393a 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 212 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Amet_1838 ae942b21fb352d1c6f1198743717393a 379 SUPERFAMILY SSF53383 3 378 7.31E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_1838 ae942b21fb352d1c6f1198743717393a 379 Pfam PF00266 Aminotransferase class-V 3 371 1.2E-88 T 12-10-2018 IPR000192 Aminotransferase class V domain Amet_1838 ae942b21fb352d1c6f1198743717393a 379 PIRSF PIRSF005572 1 379 1.5E-57 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Amet_4075 b32e0187042efd058eed4ea9e6dc6d6a 221 Pfam PF01712 Deoxynucleoside kinase 6 207 1.6E-39 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain Amet_4075 b32e0187042efd058eed4ea9e6dc6d6a 221 SUPERFAMILY SSF52540 1 210 7.71E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4075 b32e0187042efd058eed4ea9e6dc6d6a 221 Gene3D G3DSA:3.40.50.300 3 210 7.2E-42 T 12-10-2018 Amet_4075 b32e0187042efd058eed4ea9e6dc6d6a 221 PIRSF PIRSF000705 1 215 3.8E-52 T 12-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 Amet_1985 b1254d513669fed73bc36744fab29b3d 131 SUPERFAMILY SSF51182 38 128 6.13E-19 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Amet_1985 b1254d513669fed73bc36744fab29b3d 131 Gene3D G3DSA:2.60.120.10 41 131 2.7E-26 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_1985 b1254d513669fed73bc36744fab29b3d 131 Pfam PF07883 Cupin domain 60 124 1.3E-10 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Amet_1131 5b389800a8def1eeac5fca428088047f 545 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 47 542 8.5E-178 T 12-10-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 Amet_1131 5b389800a8def1eeac5fca428088047f 545 Gene3D G3DSA:3.10.105.10 288 512 8.3E-128 T 12-10-2018 Amet_1131 5b389800a8def1eeac5fca428088047f 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 453 5.5E-76 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_1131 5b389800a8def1eeac5fca428088047f 545 SUPERFAMILY SSF53850 50 544 4.89E-103 T 12-10-2018 Amet_1131 5b389800a8def1eeac5fca428088047f 545 PIRSF PIRSF002741 4 544 5.3E-86 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_1131 5b389800a8def1eeac5fca428088047f 545 Gene3D G3DSA:3.40.190.10 74 287 8.3E-128 T 12-10-2018 Amet_4581 e982b28d0be7f563374c34e55b9b037d 451 SUPERFAMILY SSF50475 6 292 4.32E-75 T 12-10-2018 Amet_4581 e982b28d0be7f563374c34e55b9b037d 451 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 421 1.6E-94 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Amet_4581 e982b28d0be7f563374c34e55b9b037d 451 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 395 3.3E-101 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Amet_4581 e982b28d0be7f563374c34e55b9b037d 451 SUPERFAMILY SSF143968 294 431 9.55E-35 T 12-10-2018 Amet_4581 e982b28d0be7f563374c34e55b9b037d 451 Gene3D G3DSA:3.40.1670.10 308 420 4.3E-30 T 12-10-2018 Amet_0552 34a7a9ba1883f007ab0dd51d51b7a44d 429 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 418 1.4E-109 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_0552 34a7a9ba1883f007ab0dd51d51b7a44d 429 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 422 1.1E-123 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_0552 34a7a9ba1883f007ab0dd51d51b7a44d 429 PIRSF PIRSF006066 5 429 8.3E-129 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 ProSitePatterns PS01008 DnaA protein signature. 405 424 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 358 424 4.1E-30 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 Gene3D G3DSA:3.40.50.300 93 276 4.2E-56 T 12-10-2018 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 Gene3D G3DSA:1.10.1750.10 349 447 6.1E-33 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 SUPERFAMILY SSF48295 344 447 3.92E-35 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 445 6.8E-180 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 Pfam PF11638 DnaA N-terminal domain 7 68 8.5E-14 T 12-10-2018 IPR024633 DnaA N-terminal domain Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 177 191 2.2E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 405 424 2.2E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 145 165 2.2E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 209 223 2.2E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 243 270 2.2E-52 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 446 33.93 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 SUPERFAMILY SSF52540 113 324 1.15E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 SMART SM00382 144 272 2.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 Gene3D G3DSA:1.10.8.60 278 348 2.1E-28 T 12-10-2018 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 Pfam PF00308 Bacterial dnaA protein 112 329 2.3E-104 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 SMART SM00760 355 424 5.1E-40 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Amet_0001 61eb670f5a846bbf7b2c994483931d6b 448 Gene3D G3DSA:3.30.300.180 1 83 1.8E-22 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily Amet_2457 92b734ff43c4cd42daff51e5cbe75fb2 411 Pfam PF01594 AI-2E family transporter 73 401 1.7E-72 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Amet_4462 4da9d515370fcb5fd4ceeced18ab0a62 122 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 122 29.247 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4462 4da9d515370fcb5fd4ceeced18ab0a62 122 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 122 6.4E-48 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4462 4da9d515370fcb5fd4ceeced18ab0a62 122 Gene3D G3DSA:3.30.420.100 5 122 1.9E-46 T 12-10-2018 Amet_4462 4da9d515370fcb5fd4ceeced18ab0a62 122 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 122 2.6E-44 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4462 4da9d515370fcb5fd4ceeced18ab0a62 122 SUPERFAMILY SSF53137 7 120 1.66E-53 T 12-10-2018 Amet_4285 1da0c686be4832443425195bfc694267 68 SUPERFAMILY SSF143100 5 60 9.42E-10 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like Amet_4285 1da0c686be4832443425195bfc694267 68 Gene3D G3DSA:3.30.160.250 5 66 6.7E-7 T 12-10-2018 Amet_2196 1aa3f79ae82092e11f9b344d0a742d21 92 SUPERFAMILY SSF143430 1 85 1.2E-21 T 12-10-2018 Amet_2196 1aa3f79ae82092e11f9b344d0a742d21 92 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 88 1.2E-12 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Amet_2196 1aa3f79ae82092e11f9b344d0a742d21 92 Pfam PF09827 CRISPR associated protein Cas2 1 76 7.1E-20 T 12-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Amet_2196 1aa3f79ae82092e11f9b344d0a742d21 92 Gene3D G3DSA:3.30.70.240 1 71 8.8E-26 T 12-10-2018 Amet_2196 1aa3f79ae82092e11f9b344d0a742d21 92 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 92 14.176 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Amet_0157 fb2fa8cc3836f0240edd69e68eb3568f 315 SUPERFAMILY SSF53271 73 306 5.83E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_0157 fb2fa8cc3836f0240edd69e68eb3568f 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 8 315 50.877 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Amet_0157 fb2fa8cc3836f0240edd69e68eb3568f 315 Gene3D G3DSA:3.40.50.2020 151 291 2.4E-129 T 12-10-2018 Amet_0157 fb2fa8cc3836f0240edd69e68eb3568f 315 SMART SM01400 8 124 5.0E-82 T 12-10-2018 Amet_0157 fb2fa8cc3836f0240edd69e68eb3568f 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 314 1.4E-26 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Amet_0157 fb2fa8cc3836f0240edd69e68eb3568f 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 315 1.2E-129 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Amet_0157 fb2fa8cc3836f0240edd69e68eb3568f 315 Gene3D G3DSA:3.40.50.2020 11 303 2.4E-129 T 12-10-2018 Amet_0157 fb2fa8cc3836f0240edd69e68eb3568f 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 124 1.5E-49 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Amet_0157 fb2fa8cc3836f0240edd69e68eb3568f 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Amet_0966 052fdd517eacd1ee6470faed636f5efd 373 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 251 323 2.8E-13 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Amet_0966 052fdd517eacd1ee6470faed636f5efd 373 Pfam PF01385 Probable transposase 181 282 7.1E-22 T 12-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Amet_0966 052fdd517eacd1ee6470faed636f5efd 373 Pfam PF12323 Helix-turn-helix domain 1 44 1.5E-20 T 12-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain Amet_0966 052fdd517eacd1ee6470faed636f5efd 373 Pfam PF07282 Putative transposase DNA-binding domain 296 364 1.2E-19 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Amet_0141 514d2d48c4356446726f1d672b7180cb 148 Gene3D G3DSA:3.40.250.10 44 144 8.4E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_0141 514d2d48c4356446726f1d672b7180cb 148 SUPERFAMILY SSF52821 43 139 2.49E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_0141 514d2d48c4356446726f1d672b7180cb 148 Pfam PF00581 Rhodanese-like domain 51 139 1.7E-14 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_0141 514d2d48c4356446726f1d672b7180cb 148 SMART SM00450 50 145 4.0E-15 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3867 2714c6307d0bcd35a22af7222ec1f84d 169 ProSitePatterns PS00211 ABC transporters family signature. 95 109 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3867 2714c6307d0bcd35a22af7222ec1f84d 169 SUPERFAMILY SSF52540 2 169 1.81E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3867 2714c6307d0bcd35a22af7222ec1f84d 169 Pfam PF00005 ABC transporter 2 123 8.8E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3867 2714c6307d0bcd35a22af7222ec1f84d 169 Gene3D G3DSA:3.40.50.300 2 169 3.3E-66 T 12-10-2018 Amet_2085 7be931a7e1708dbd08aaf2193614f2da 274 Gene3D G3DSA:3.20.20.20 1 269 1.6E-97 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2085 7be931a7e1708dbd08aaf2193614f2da 274 Pfam PF00809 Pterin binding enzyme 6 226 4.7E-23 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2085 7be931a7e1708dbd08aaf2193614f2da 274 SUPERFAMILY SSF51717 1 260 1.7E-77 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 2.9E-111 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 5.9E-75 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 5.1E-43 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 5.1E-43 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 5.1E-43 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 5.1E-43 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 5.1E-43 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 Gene3D G3DSA:3.40.190.10 4 207 1.2E-82 T 12-10-2018 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.619 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 Gene3D G3DSA:3.40.190.10 101 200 1.2E-82 T 12-10-2018 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 PIRSF PIRSF001438 1 310 1.5E-120 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 SUPERFAMILY SSF53850 2 215 5.75E-77 T 12-10-2018 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 7.3E-21 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 Gene3D G3DSA:3.30.160.40 219 304 5.0E-28 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_0060 143bee51bfba7011f94ad5fbd5e2b444 316 SUPERFAMILY SSF54782 218 307 4.32E-29 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Amet_4129 697a601f3a949e59cd179a3f3340c64d 377 SUPERFAMILY SSF51261 134 373 3.03E-61 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_4129 697a601f3a949e59cd179a3f3340c64d 377 Pfam PF01551 Peptidase family M23 275 370 5.9E-35 T 12-10-2018 IPR016047 Peptidase M23 Amet_4129 697a601f3a949e59cd179a3f3340c64d 377 Gene3D G3DSA:2.70.70.10 218 376 5.5E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_3743 fda7ca78f015da34cf19a1373393c3a8 273 Pfam PF05013 N-formylglutamate amidohydrolase 9 240 1.1E-49 T 12-10-2018 IPR007709 N-formylglutamate amidohydrolase Amet_3743 fda7ca78f015da34cf19a1373393c3a8 273 Gene3D G3DSA:3.40.630.40 1 270 7.5E-39 T 12-10-2018 Amet_3743 fda7ca78f015da34cf19a1373393c3a8 273 SUPERFAMILY SSF53187 6 248 4.05E-43 T 12-10-2018 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 Gene3D G3DSA:3.30.470.20 205 338 3.7E-18 T 12-10-2018 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 Gene3D G3DSA:3.90.190.20 726 873 2.3E-23 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 3 863 0.0 T 12-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 SUPERFAMILY SSF53244 721 849 9.52E-26 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 SUPERFAMILY SSF56059 214 479 4.42E-35 T 12-10-2018 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 Pfam PF08245 Mur ligase middle domain 485 696 1.5E-27 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 214 309 5.5E-9 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 Gene3D G3DSA:3.40.1190.10 479 715 1.0E-39 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 SUPERFAMILY SSF53623 443 731 1.44E-45 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 Pfam PF02875 Mur ligase family, glutamate ligase domain 721 795 5.1E-9 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 Gene3D G3DSA:3.30.470.20 359 472 1.6E-10 T 12-10-2018 Amet_1227 9e0145b033e3e93b6e23a725659d8dff 887 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 483 506 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Amet_4598 d18f822412fb72b551dd2be01ead4773 369 PIRSF PIRSF006060 3 300 5.8E-11 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amet_4598 d18f822412fb72b551dd2be01ead4773 369 PIRSF PIRSF006060 307 366 130.0 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amet_4598 d18f822412fb72b551dd2be01ead4773 369 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 363 1.5E-78 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_4598 d18f822412fb72b551dd2be01ead4773 369 Gene3D G3DSA:1.20.1740.10 3 299 2.7E-13 T 12-10-2018 Amet_4598 d18f822412fb72b551dd2be01ead4773 369 Pfam PF03845 Spore germination protein 8 321 1.8E-65 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_1398 3563de260a6d5c7d6930b9fd1a5788c7 333 Gene3D G3DSA:3.40.190.10 147 333 6.2E-31 T 12-10-2018 Amet_1398 3563de260a6d5c7d6930b9fd1a5788c7 333 SUPERFAMILY SSF53850 38 258 1.65E-35 T 12-10-2018 Amet_1398 3563de260a6d5c7d6930b9fd1a5788c7 333 Pfam PF09084 NMT1/THI5 like 45 254 1.1E-20 T 12-10-2018 IPR015168 SsuA/THI5-like Amet_1398 3563de260a6d5c7d6930b9fd1a5788c7 333 Gene3D G3DSA:3.40.190.10 33 125 2.0E-16 T 12-10-2018 Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 SUPERFAMILY SSF51430 1 253 1.44E-45 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 Gene3D G3DSA:3.20.20.100 1 246 7.3E-45 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 Pfam PF00037 4Fe-4S binding domain 291 314 7.9E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 SUPERFAMILY SSF54862 262 315 2.23E-13 T 12-10-2018 Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 Pfam PF00248 Aldo/keto reductase family 16 211 5.6E-30 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 PRINTS PR00069 Aldo-keto reductase signature 94 112 4.0E-10 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 PRINTS PR00069 Aldo-keto reductase signature 42 66 4.0E-10 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 PRINTS PR00069 Aldo-keto reductase signature 128 145 4.0E-10 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 Gene3D G3DSA:3.30.70.20 250 315 8.3E-11 T 12-10-2018 Amet_2461 78e59aa56e2641d85a0b079accce28a9 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 298 309 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_2312 0c9b8f2b4e7e065a03590280b75f9582 334 Gene3D G3DSA:1.20.58.1130 10 206 2.2E-72 T 12-10-2018 Amet_2312 0c9b8f2b4e7e065a03590280b75f9582 334 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 5 325 2.7E-63 T 12-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 Amet_2312 0c9b8f2b4e7e065a03590280b75f9582 334 Gene3D G3DSA:1.20.1420.30 37 322 2.2E-72 T 12-10-2018 Amet_2312 0c9b8f2b4e7e065a03590280b75f9582 334 Pfam PF01699 Sodium/calcium exchanger protein 175 328 5.7E-24 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Amet_2312 0c9b8f2b4e7e065a03590280b75f9582 334 Pfam PF01699 Sodium/calcium exchanger protein 6 146 1.4E-21 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Amet_3101 b2d64136b8f5a11a199bfed9a168a45f 404 Gene3D G3DSA:3.90.550.10 28 260 2.0E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_3101 b2d64136b8f5a11a199bfed9a168a45f 404 Pfam PF13641 Glycosyltransferase like family 2 44 269 7.1E-32 T 12-10-2018 Amet_3101 b2d64136b8f5a11a199bfed9a168a45f 404 SUPERFAMILY SSF53448 38 315 7.03E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_4460 8005e0b8a36756ca1b1d4c3d142b9ea7 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.8E-25 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4460 8005e0b8a36756ca1b1d4c3d142b9ea7 59 Gene3D G3DSA:3.30.1390.20 1 59 7.1E-26 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Amet_4460 8005e0b8a36756ca1b1d4c3d142b9ea7 59 PIRSF PIRSF002211 1 59 9.2E-28 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4460 8005e0b8a36756ca1b1d4c3d142b9ea7 59 SUPERFAMILY SSF55129 4 58 1.18E-19 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Amet_4460 8005e0b8a36756ca1b1d4c3d142b9ea7 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 19.705 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4460 8005e0b8a36756ca1b1d4c3d142b9ea7 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 3.4E-20 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Amet_3441 9d6ab4756f13af456b9c60c3152d2635 327 Gene3D G3DSA:3.40.50.2000 170 327 9.5E-13 T 12-10-2018 Amet_3441 9d6ab4756f13af456b9c60c3152d2635 327 SUPERFAMILY SSF53756 59 327 2.38E-23 T 12-10-2018 Amet_4521 e30c736b149938d3b3e25659731c93ea 402 Pfam PF13200 Putative glycosyl hydrolase domain 75 395 2.3E-122 T 12-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 Amet_4521 e30c736b149938d3b3e25659731c93ea 402 Gene3D G3DSA:3.20.20.70 153 295 3.3E-6 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_4521 e30c736b149938d3b3e25659731c93ea 402 SUPERFAMILY SSF51445 143 282 2.81E-9 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_0904 c3bb5b54f5a0e701d7eab77a5c5f938d 414 SUPERFAMILY SSF51556 4 412 5.78E-128 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_0904 c3bb5b54f5a0e701d7eab77a5c5f938d 414 Gene3D G3DSA:3.20.20.140 118 412 5.2E-40 T 12-10-2018 Amet_0904 c3bb5b54f5a0e701d7eab77a5c5f938d 414 Gene3D G3DSA:1.10.2020.10 39 117 1.6E-36 T 12-10-2018 Amet_2244 1fcdcc882e725e33043269dfb4e2c01c 147 SUPERFAMILY SSF55729 3 142 4.12E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2244 1fcdcc882e725e33043269dfb4e2c01c 147 Pfam PF00583 Acetyltransferase (GNAT) family 21 133 2.0E-16 T 12-10-2018 IPR000182 GNAT domain Amet_2244 1fcdcc882e725e33043269dfb4e2c01c 147 Gene3D G3DSA:3.40.630.30 2 147 4.2E-33 T 12-10-2018 Amet_2244 1fcdcc882e725e33043269dfb4e2c01c 147 PIRSF PIRSF000452 1 147 3.3E-63 T 12-10-2018 IPR024170 Aminoglycoside N6-acetyltransferase Amet_2282 748539fb5894f425857b2b8eacb0351f 177 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 173 1.9E-34 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Amet_2282 748539fb5894f425857b2b8eacb0351f 177 Pfam PF04205 FMN-binding domain 92 168 7.7E-17 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_2282 748539fb5894f425857b2b8eacb0351f 177 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 1 173 23.02 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Amet_2282 748539fb5894f425857b2b8eacb0351f 177 SMART SM00900 92 171 4.8E-19 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_2282 748539fb5894f425857b2b8eacb0351f 177 PIRSF PIRSF006091 1 177 1.1E-39 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Amet_0796 1f839638fa20cf2b12d3ab1801131637 159 Pfam PF02561 Flagellar protein FliS 4 114 1.4E-20 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Amet_0796 1f839638fa20cf2b12d3ab1801131637 159 Gene3D G3DSA:1.20.120.340 2 117 1.6E-20 T 12-10-2018 Amet_0796 1f839638fa20cf2b12d3ab1801131637 159 SUPERFAMILY SSF101116 4 115 1.7E-21 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Amet_3636 1fb790b8ab9e1f9ac85c8f18254b1abe 370 Gene3D G3DSA:3.30.70.20 180 258 2.0E-5 T 12-10-2018 Amet_3636 1fb790b8ab9e1f9ac85c8f18254b1abe 370 SUPERFAMILY SSF46548 144 247 6.8E-13 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_3636 1fb790b8ab9e1f9ac85c8f18254b1abe 370 Pfam PF13484 4Fe-4S double cluster binding domain 185 247 9.1E-14 T 12-10-2018 Amet_3636 1fb790b8ab9e1f9ac85c8f18254b1abe 370 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 185 196 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3636 1fb790b8ab9e1f9ac85c8f18254b1abe 370 Pfam PF13646 HEAT repeats 297 360 4.4E-9 T 12-10-2018 Amet_3636 1fb790b8ab9e1f9ac85c8f18254b1abe 370 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 7 338 9.2E-98 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Amet_3636 1fb790b8ab9e1f9ac85c8f18254b1abe 370 SUPERFAMILY SSF48371 296 357 3.91E-7 T 12-10-2018 IPR016024 Armadillo-type fold Amet_3636 1fb790b8ab9e1f9ac85c8f18254b1abe 370 Pfam PF08331 Domain of unknown function (DUF1730) 54 131 1.3E-16 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 Amet_3636 1fb790b8ab9e1f9ac85c8f18254b1abe 370 Gene3D G3DSA:1.25.10.10 292 366 8.0E-8 T 12-10-2018 IPR011989 Armadillo-like helical Amet_4182 5781b3a560de0d55cfa9c398a99832b0 242 Gene3D G3DSA:3.40.50.1360 1 242 1.3E-95 T 12-10-2018 Amet_4182 5781b3a560de0d55cfa9c398a99832b0 242 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Amet_4182 5781b3a560de0d55cfa9c398a99832b0 242 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 42.354 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Amet_4182 5781b3a560de0d55cfa9c398a99832b0 242 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 239 2.1E-90 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Amet_4182 5781b3a560de0d55cfa9c398a99832b0 242 SUPERFAMILY SSF100950 1 239 7.23E-92 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_4182 5781b3a560de0d55cfa9c398a99832b0 242 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 28 226 1.6E-20 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Amet_3479 514a9338ebb4e55fe244b5449f0e5d9a 112 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 34 1.4E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_3479 514a9338ebb4e55fe244b5449f0e5d9a 112 Gene3D G3DSA:3.30.700.10 15 109 2.6E-20 T 12-10-2018 Amet_3479 514a9338ebb4e55fe244b5449f0e5d9a 112 SUPERFAMILY SSF54523 15 101 8.37E-19 T 12-10-2018 Amet_3479 514a9338ebb4e55fe244b5449f0e5d9a 112 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 2.2E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_3479 514a9338ebb4e55fe244b5449f0e5d9a 112 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 8.1E-11 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Amet_3479 514a9338ebb4e55fe244b5449f0e5d9a 112 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 8.1E-11 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Amet_3479 514a9338ebb4e55fe244b5449f0e5d9a 112 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_0017 3dd88fcf9cdbb65bd016a6a0935a952c 303 Hamap MF_00568 Quinolinate synthase A [nadA]. 4 302 44.446 T 12-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Amet_0017 3dd88fcf9cdbb65bd016a6a0935a952c 303 Gene3D G3DSA:3.40.50.10800 8 283 2.2E-120 T 12-10-2018 Amet_0017 3dd88fcf9cdbb65bd016a6a0935a952c 303 SUPERFAMILY SSF142754 5 302 1.11E-118 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Amet_0017 3dd88fcf9cdbb65bd016a6a0935a952c 303 Gene3D G3DSA:3.40.50.10800 172 258 2.2E-120 T 12-10-2018 Amet_0017 3dd88fcf9cdbb65bd016a6a0935a952c 303 Gene3D G3DSA:3.40.50.10800 88 301 2.2E-120 T 12-10-2018 Amet_0017 3dd88fcf9cdbb65bd016a6a0935a952c 303 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 2 302 1.0E-109 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Amet_0017 3dd88fcf9cdbb65bd016a6a0935a952c 303 Pfam PF02445 Quinolinate synthetase A protein 9 301 2.0E-123 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Amet_0779 c0b5a305f54cba82acb6c372c53d9e4d 327 SUPERFAMILY SSF53850 36 325 6.65E-76 T 12-10-2018 Amet_0779 c0b5a305f54cba82acb6c372c53d9e4d 327 Pfam PF16868 NMT1-like family 40 324 1.2E-93 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amet_0779 c0b5a305f54cba82acb6c372c53d9e4d 327 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 324 2.5E-114 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amet_0779 c0b5a305f54cba82acb6c372c53d9e4d 327 Gene3D G3DSA:3.40.190.10 124 260 4.5E-102 T 12-10-2018 Amet_0779 c0b5a305f54cba82acb6c372c53d9e4d 327 Gene3D G3DSA:3.40.190.10 40 324 4.5E-102 T 12-10-2018 Amet_2369 1eafc582ed5fe466a49cc22ee94da91b 475 SUPERFAMILY SSF53686 56 368 1.28E-54 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_2369 1eafc582ed5fe466a49cc22ee94da91b 475 Gene3D G3DSA:3.40.50.1100 67 202 8.6E-20 T 12-10-2018 Amet_2369 1eafc582ed5fe466a49cc22ee94da91b 475 Gene3D G3DSA:3.40.50.1100 203 372 2.4E-19 T 12-10-2018 Amet_2369 1eafc582ed5fe466a49cc22ee94da91b 475 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 367 8.3E-54 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_4537 0bf1bc147f82a06b618faeb9ce02219d 133 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 23 97 5.1E-18 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Amet_4537 0bf1bc147f82a06b618faeb9ce02219d 133 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 26 100 2.2E-12 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Amet_3218 0bf1bc147f82a06b618faeb9ce02219d 133 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 23 97 5.1E-18 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Amet_3218 0bf1bc147f82a06b618faeb9ce02219d 133 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 26 100 2.2E-12 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Amet_1845 3322a4047b9edec485ee3c693fd74bd5 121 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1845 3322a4047b9edec485ee3c693fd74bd5 121 Gene3D G3DSA:1.10.10.10 7 121 1.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1845 3322a4047b9edec485ee3c693fd74bd5 121 SUPERFAMILY SSF46785 1 77 5.12E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3282 2c68dec3bed273d7121e8404ddbb1126 231 Pfam PF05067 Manganese containing catalase 1 183 3.0E-55 T 12-10-2018 IPR007760 Manganese catalase Amet_3282 2c68dec3bed273d7121e8404ddbb1126 231 Gene3D G3DSA:1.20.1260.10 1 184 3.0E-66 T 12-10-2018 IPR012347 Ferritin-like Amet_3282 2c68dec3bed273d7121e8404ddbb1126 231 SUPERFAMILY SSF47240 1 224 5.99E-74 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_3782 392ef685dc8322b15fea51c045792a87 113 Gene3D G3DSA:2.60.120.10 2 113 2.5E-33 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_3782 392ef685dc8322b15fea51c045792a87 113 Pfam PF07883 Cupin domain 38 95 2.0E-11 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Amet_3782 392ef685dc8322b15fea51c045792a87 113 PIRSF PIRSF029883 5 113 3.2E-36 T 12-10-2018 IPR025499 Pectin degradation protein KdgF Amet_3782 392ef685dc8322b15fea51c045792a87 113 SUPERFAMILY SSF51182 4 104 6.48E-19 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Amet_0713 244e96bf16442764385ddc5f4e3864d9 177 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 26 162 1.8E-42 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 Amet_0713 244e96bf16442764385ddc5f4e3864d9 177 Pfam PF06866 Protein of unknown function (DUF1256) 5 161 4.6E-53 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 Amet_0713 244e96bf16442764385ddc5f4e3864d9 177 SUPERFAMILY SSF53163 3 173 7.32E-45 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily Amet_1641 bec69211b868ccea62c931912ddf9eb3 189 SUPERFAMILY SSF57997 71 183 7.85E-6 T 12-10-2018 Amet_1641 bec69211b868ccea62c931912ddf9eb3 189 SUPERFAMILY SSF102829 7 89 1.26E-14 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily Amet_1641 bec69211b868ccea62c931912ddf9eb3 189 Pfam PF05164 Cell division protein ZapA 7 103 1.2E-14 T 12-10-2018 IPR007838 Cell division protein ZapA-like Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 Gene3D G3DSA:3.30.2130.10 283 442 9.0E-55 T 12-10-2018 Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 Pfam PF00696 Amino acid kinase family 3 265 3.4E-33 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 PIRSF PIRSF000726 2 442 1.7E-78 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 SUPERFAMILY SSF53633 5 279 2.62E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 Gene3D G3DSA:3.40.1160.10 1 279 5.0E-83 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 SUPERFAMILY SSF55021 287 359 2.81E-12 T 12-10-2018 Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 SUPERFAMILY SSF55021 365 438 1.0E-21 T 12-10-2018 Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 438 4.3E-79 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Amet_3407 e8cb1cb0b27d84220a7c1e0d0ad386c9 442 Pfam PF01842 ACT domain 388 427 9.1E-8 T 12-10-2018 IPR002912 ACT domain Amet_0998 64a5796d998af00de25b4a1c6f757771 56 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 3.3E-7 T 12-10-2018 Amet_0998 64a5796d998af00de25b4a1c6f757771 56 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 3.3E-7 T 12-10-2018 Amet_0998 64a5796d998af00de25b4a1c6f757771 56 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 56 3.3E-7 T 12-10-2018 Amet_0998 64a5796d998af00de25b4a1c6f757771 56 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 48 1.1E-17 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Amet_0998 64a5796d998af00de25b4a1c6f757771 56 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 56 16.928 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Amet_0998 64a5796d998af00de25b4a1c6f757771 56 Pfam PF02416 mttA/Hcf106 family 5 51 6.6E-19 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Amet_2090 196e6a87a9aa6838b3597e8d3e6630dc 440 Pfam PF07670 Nucleoside recognition 132 225 1.2E-5 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Amet_0995 052aa5392a5559ff5cee1bb7365165e9 340 SUPERFAMILY SSF53218 170 311 1.02E-32 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_0995 052aa5392a5559ff5cee1bb7365165e9 340 Gene3D G3DSA:3.40.980.10 150 308 4.9E-30 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_0995 052aa5392a5559ff5cee1bb7365165e9 340 Pfam PF00994 Probable molybdopterin binding domain 174 304 2.4E-20 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_0995 052aa5392a5559ff5cee1bb7365165e9 340 SMART SM00852 174 306 6.6E-22 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_1357 2d005569119f718cc7186ffcdd49c8ae 486 Pfam PF02347 Glycine cleavage system P-protein 35 308 3.5E-10 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Amet_1357 2d005569119f718cc7186ffcdd49c8ae 486 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 6 484 59.385 T 12-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 Amet_1357 2d005569119f718cc7186ffcdd49c8ae 486 Gene3D G3DSA:3.40.640.10 85 318 3.1E-63 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_1357 2d005569119f718cc7186ffcdd49c8ae 486 SUPERFAMILY SSF53383 26 482 6.33E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_1357 2d005569119f718cc7186ffcdd49c8ae 486 Gene3D G3DSA:3.90.1150.10 337 469 2.7E-46 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_4789 c717ea81c1b7cac1752923e7d5c72e80 381 Gene3D G3DSA:3.90.1150.10 2 370 1.1E-123 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_4789 c717ea81c1b7cac1752923e7d5c72e80 381 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 2 376 5.9E-155 T 12-10-2018 IPR010969 Cysteine desulfurase-related, unknown function Amet_4789 c717ea81c1b7cac1752923e7d5c72e80 381 Gene3D G3DSA:3.40.640.10 16 266 1.1E-123 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_4789 c717ea81c1b7cac1752923e7d5c72e80 381 PIRSF PIRSF005572 1 381 5.9E-69 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Amet_4789 c717ea81c1b7cac1752923e7d5c72e80 381 SUPERFAMILY SSF53383 1 379 6.05E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_4789 c717ea81c1b7cac1752923e7d5c72e80 381 Pfam PF00266 Aminotransferase class-V 2 368 8.6E-99 T 12-10-2018 IPR000192 Aminotransferase class V domain Amet_2740 b830c059fbbfa9944d72ee28be10f460 204 SUPERFAMILY SSF53098 7 198 1.24E-62 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2740 b830c059fbbfa9944d72ee28be10f460 204 Gene3D G3DSA:3.30.420.10 2 204 1.8E-74 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_2740 b830c059fbbfa9944d72ee28be10f460 204 Pfam PF01351 Ribonuclease HII 19 199 3.9E-32 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain Amet_2740 b830c059fbbfa9944d72ee28be10f460 204 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 201 34.305 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 Amet_4464 efbe1928a2dd4758dee95f942e6f1f11 132 Gene3D G3DSA:3.30.1370.30 4 74 1.2E-31 T 12-10-2018 Amet_4464 efbe1928a2dd4758dee95f942e6f1f11 132 Gene3D G3DSA:3.30.1490.10 75 132 4.8E-26 T 12-10-2018 Amet_4464 efbe1928a2dd4758dee95f942e6f1f11 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.769 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4464 efbe1928a2dd4758dee95f942e6f1f11 132 SUPERFAMILY SSF56047 3 132 1.16E-48 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4464 efbe1928a2dd4758dee95f942e6f1f11 132 Pfam PF00410 Ribosomal protein S8 5 132 1.9E-52 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_1019 dc6bcaea542cf010e2d2aaf40b487f15 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 193 6.5E-71 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1019 dc6bcaea542cf010e2d2aaf40b487f15 218 PIRSF PIRSF000498 1 212 1.3E-77 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1019 dc6bcaea542cf010e2d2aaf40b487f15 218 Gene3D G3DSA:2.40.30.20 101 205 2.0E-32 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_1019 dc6bcaea542cf010e2d2aaf40b487f15 218 Pfam PF00677 Lumazine binding domain 99 183 8.3E-23 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1019 dc6bcaea542cf010e2d2aaf40b487f15 218 Pfam PF00677 Lumazine binding domain 3 86 1.8E-24 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Amet_1019 dc6bcaea542cf010e2d2aaf40b487f15 218 Gene3D G3DSA:2.40.30.20 1 88 1.3E-31 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Amet_1019 dc6bcaea542cf010e2d2aaf40b487f15 218 SUPERFAMILY SSF63380 93 193 2.72E-31 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amet_1019 dc6bcaea542cf010e2d2aaf40b487f15 218 SUPERFAMILY SSF63380 1 92 1.28E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Amet_3003 a777220e18b46f54def0dd74d684180d 459 Pfam PF01212 Beta-eliminating lyase 47 424 8.4E-95 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Amet_3003 a777220e18b46f54def0dd74d684180d 459 Gene3D G3DSA:3.40.640.10 59 312 5.4E-206 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3003 a777220e18b46f54def0dd74d684180d 459 Gene3D G3DSA:3.90.1150.10 7 453 5.4E-206 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3003 a777220e18b46f54def0dd74d684180d 459 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 248 266 - T 12-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 Amet_3003 a777220e18b46f54def0dd74d684180d 459 SUPERFAMILY SSF53383 3 458 3.57E-138 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3003 a777220e18b46f54def0dd74d684180d 459 Hamap MF_00544 Tryptophanase [tnaA]. 2 458 96.543 T 12-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 Amet_3003 a777220e18b46f54def0dd74d684180d 459 PIRSF PIRSF001386 1 459 5.7E-218 T 12-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 Amet_3022 f2267f1af1156fe948a9217504d88036 462 Pfam PF03129 Anticodon binding domain 371 458 5.3E-23 T 12-10-2018 IPR004154 Anticodon-binding Amet_3022 f2267f1af1156fe948a9217504d88036 462 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 163 292 2.0E-7 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Amet_3022 f2267f1af1156fe948a9217504d88036 462 SUPERFAMILY SSF55681 6 374 2.59E-121 T 12-10-2018 Amet_3022 f2267f1af1156fe948a9217504d88036 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 149 161 1.2E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_3022 f2267f1af1156fe948a9217504d88036 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 326 338 1.2E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_3022 f2267f1af1156fe948a9217504d88036 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 170 187 1.2E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_3022 f2267f1af1156fe948a9217504d88036 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 406 425 1.2E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_3022 f2267f1af1156fe948a9217504d88036 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 26 40 1.2E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_3022 f2267f1af1156fe948a9217504d88036 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 219 229 1.2E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_3022 f2267f1af1156fe948a9217504d88036 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 202 219 1.2E-52 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_3022 f2267f1af1156fe948a9217504d88036 462 SUPERFAMILY SSF52954 358 461 1.04E-33 T 12-10-2018 Amet_3022 f2267f1af1156fe948a9217504d88036 462 Gene3D G3DSA:3.40.50.800 367 461 1.8E-30 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily Amet_3022 f2267f1af1156fe948a9217504d88036 462 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 6 243 1.1E-89 T 12-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Amet_3022 f2267f1af1156fe948a9217504d88036 462 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 4 461 51.685 T 12-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 Amet_0620 e69f1818a32b34335435a4420a614c85 193 SMART SM00793 4 193 2.1E-5 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_0620 e69f1818a32b34335435a4420a614c85 193 Pfam PF04647 Accessory gene regulator B 9 181 8.2E-36 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_4587 6db1889791795a8178c325d2ac89dc53 230 Pfam PF04199 Putative cyclase 6 171 3.3E-34 T 12-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amet_4587 6db1889791795a8178c325d2ac89dc53 230 Gene3D G3DSA:3.50.30.50 1 230 5.5E-54 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amet_4587 6db1889791795a8178c325d2ac89dc53 230 SUPERFAMILY SSF102198 2 228 3.4E-56 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amet_2621 23e6f1ef1d51dcc94cf21fdb3f876ca7 340 PIRSF PIRSF001123 1 339 3.0E-116 T 12-10-2018 IPR008007 Peptidase M42 Amet_2621 23e6f1ef1d51dcc94cf21fdb3f876ca7 340 Gene3D G3DSA:2.40.30.40 64 153 1.3E-117 T 12-10-2018 IPR023367 Peptidase M42, domain 2 Amet_2621 23e6f1ef1d51dcc94cf21fdb3f876ca7 340 Pfam PF05343 M42 glutamyl aminopeptidase 40 326 3.7E-95 T 12-10-2018 IPR008007 Peptidase M42 Amet_2621 23e6f1ef1d51dcc94cf21fdb3f876ca7 340 SUPERFAMILY SSF53187 2 334 2.73E-65 T 12-10-2018 Amet_2621 23e6f1ef1d51dcc94cf21fdb3f876ca7 340 Gene3D G3DSA:3.40.630.10 2 326 1.3E-117 T 12-10-2018 Amet_2621 23e6f1ef1d51dcc94cf21fdb3f876ca7 340 SUPERFAMILY SSF101821 65 170 1.07E-26 T 12-10-2018 Amet_3746 b8fa147d36f3dc733b562e691770f711 436 Gene3D G3DSA:3.90.226.30 17 429 1.0E-155 T 12-10-2018 Amet_3746 b8fa147d36f3dc733b562e691770f711 436 Pfam PF09861 Domain of unknown function (DUF2088) 19 224 1.2E-74 T 12-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 Amet_3746 b8fa147d36f3dc733b562e691770f711 436 Gene3D G3DSA:3.40.50.11440 45 280 1.0E-155 T 12-10-2018 Amet_4699 a0a0f3052ef7b9037264eed97c5c014d 387 Pfam PF00271 Helicase conserved C-terminal domain 238 345 7.4E-25 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_4699 a0a0f3052ef7b9037264eed97c5c014d 387 SMART SM00487 29 229 1.3E-52 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_4699 a0a0f3052ef7b9037264eed97c5c014d 387 Gene3D G3DSA:3.40.50.300 2 212 7.1E-64 T 12-10-2018 Amet_4699 a0a0f3052ef7b9037264eed97c5c014d 387 SUPERFAMILY SSF52540 79 365 1.49E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4699 a0a0f3052ef7b9037264eed97c5c014d 387 SMART SM00490 264 345 6.7E-27 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_4699 a0a0f3052ef7b9037264eed97c5c014d 387 Pfam PF00270 DEAD/DEAH box helicase 34 199 3.7E-42 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Amet_4699 a0a0f3052ef7b9037264eed97c5c014d 387 Gene3D G3DSA:3.40.50.300 213 380 1.1E-44 T 12-10-2018 Amet_3611 f124d57d4e88891a22d58c02f05b004f 387 Gene3D G3DSA:3.30.70.20 317 378 2.6E-11 T 12-10-2018 Amet_3611 f124d57d4e88891a22d58c02f05b004f 387 Pfam PF04015 Domain of unknown function (DUF362) 46 247 3.5E-46 T 12-10-2018 IPR007160 Domain of unknown function DUF362 Amet_3611 f124d57d4e88891a22d58c02f05b004f 387 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 358 369 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3611 f124d57d4e88891a22d58c02f05b004f 387 SUPERFAMILY SSF54862 318 379 1.67E-14 T 12-10-2018 Amet_0920 c6306626d598a46e34492dd316889b41 226 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 217 43.294 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_0920 c6306626d598a46e34492dd316889b41 226 SUPERFAMILY SSF52317 1 218 1.67E-69 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0920 c6306626d598a46e34492dd316889b41 226 SMART SM01211 1 219 1.7E-124 T 12-10-2018 Amet_0920 c6306626d598a46e34492dd316889b41 226 PIRSF PIRSF001586 1 222 1.6E-83 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_0920 c6306626d598a46e34492dd316889b41 226 Gene3D G3DSA:3.40.50.880 1 221 2.2E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0920 c6306626d598a46e34492dd316889b41 226 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 4 205 9.4E-36 T 12-10-2018 Amet_0920 c6306626d598a46e34492dd316889b41 226 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 6.3E-89 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 SUPERFAMILY SSF53218 1 204 1.31E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 SUPERFAMILY SSF142433 249 410 5.89E-57 T 12-10-2018 IPR036653 CinA-like, C-terminal Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 Gene3D G3DSA:3.90.950.20 242 409 1.2E-56 T 12-10-2018 IPR036653 CinA-like, C-terminal Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 409 3.1E-124 T 12-10-2018 IPR008135 Competence-induced protein CinA Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 Pfam PF00994 Probable molybdopterin binding domain 5 169 4.7E-37 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 261 408 4.2E-47 T 12-10-2018 IPR008136 CinA, C-terminal Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 Gene3D G3DSA:3.40.980.10 1 171 2.3E-55 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 Pfam PF02464 Competence-damaged protein 256 408 2.4E-57 T 12-10-2018 IPR008136 CinA, C-terminal Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 PIRSF PIRSF006728 1 411 4.2E-161 T 12-10-2018 IPR008135 Competence-induced protein CinA Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 164 8.3E-25 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 411 173.454 T 12-10-2018 IPR008135 Competence-induced protein CinA Amet_1704 30805d473bec799b9dfdbd779d9d4014 411 SMART SM00852 4 171 4.1E-42 T 12-10-2018 IPR001453 MoaB/Mog domain Amet_0601 50700ac7f07c27c82e6c30bf1ee65473 453 Pfam PF02310 B12 binding domain 24 122 1.1E-13 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_0601 50700ac7f07c27c82e6c30bf1ee65473 453 SMART SM00729 183 386 8.0E-18 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_0601 50700ac7f07c27c82e6c30bf1ee65473 453 Gene3D G3DSA:3.20.20.70 165 385 2.2E-20 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0601 50700ac7f07c27c82e6c30bf1ee65473 453 SUPERFAMILY SSF102114 169 396 4.84E-28 T 12-10-2018 Amet_0601 50700ac7f07c27c82e6c30bf1ee65473 453 Pfam PF04055 Radical SAM superfamily 189 347 3.1E-15 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_1273 e4cacc87505f2f14b0f17813dbf719ad 230 Pfam PF09335 SNARE associated Golgi protein 70 187 4.2E-30 T 12-10-2018 IPR032816 SNARE associated Golgi protein Amet_1250 565652fdf750b2b7fa95797f6f18f31a 158 Gene3D G3DSA:1.10.1760.20 1 158 9.8E-12 T 12-10-2018 Amet_1250 565652fdf750b2b7fa95797f6f18f31a 158 PIRSF PIRSF024534 1 157 1.1E-52 T 12-10-2018 IPR012652 Energy coupling factor transporter S component ThiW Amet_1250 565652fdf750b2b7fa95797f6f18f31a 158 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 3 154 2.2E-48 T 12-10-2018 IPR012652 Energy coupling factor transporter S component ThiW Amet_1250 565652fdf750b2b7fa95797f6f18f31a 158 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 6 154 1.8E-56 T 12-10-2018 IPR012652 Energy coupling factor transporter S component ThiW Amet_1260 20ac1db8aa11e2a3ed8314611c72f5e1 253 SMART SM00346 5 95 1.6E-31 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amet_1260 20ac1db8aa11e2a3ed8314611c72f5e1 253 Pfam PF09339 IclR helix-turn-helix domain 7 57 3.2E-17 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amet_1260 20ac1db8aa11e2a3ed8314611c72f5e1 253 Gene3D G3DSA:3.30.450.40 76 253 3.0E-68 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_1260 20ac1db8aa11e2a3ed8314611c72f5e1 253 Gene3D G3DSA:1.10.10.10 3 75 7.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1260 20ac1db8aa11e2a3ed8314611c72f5e1 253 Pfam PF01614 Bacterial transcriptional regulator 122 247 2.0E-43 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amet_1260 20ac1db8aa11e2a3ed8314611c72f5e1 253 SUPERFAMILY SSF46785 5 78 1.33E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1260 20ac1db8aa11e2a3ed8314611c72f5e1 253 SUPERFAMILY SSF55781 70 252 6.28E-57 T 12-10-2018 Amet_0740 40122aca6ecc2b818f290a9691147875 103 Pfam PF01909 Nucleotidyltransferase domain 11 71 1.8E-9 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Amet_0740 40122aca6ecc2b818f290a9691147875 103 Gene3D G3DSA:3.30.460.10 1 102 4.3E-20 T 12-10-2018 Amet_0740 40122aca6ecc2b818f290a9691147875 103 SUPERFAMILY SSF81301 10 94 1.77E-15 T 12-10-2018 Amet_0879 288d5265b9ed4acac9b54ce274ba2236 318 Pfam PF14088 Domain of unknown function (DUF4268) 174 316 3.4E-30 T 12-10-2018 IPR025364 Domain of unknown function DUF4268 Amet_0853 288d5265b9ed4acac9b54ce274ba2236 318 Pfam PF14088 Domain of unknown function (DUF4268) 174 316 3.4E-30 T 12-10-2018 IPR025364 Domain of unknown function DUF4268 Amet_3030 a7706c3c7e921b84ff6101c8958db631 232 Pfam PF01219 Prokaryotic diacylglycerol kinase 11 112 7.7E-33 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Amet_3030 a7706c3c7e921b84ff6101c8958db631 232 Gene3D G3DSA:1.20.144.10 156 232 4.9E-10 T 12-10-2018 Amet_3030 a7706c3c7e921b84ff6101c8958db631 232 Gene3D G3DSA:1.10.3830.10 1 117 2.0E-35 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Amet_3030 a7706c3c7e921b84ff6101c8958db631 232 Pfam PF01569 PAP2 superfamily 138 230 1.1E-10 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amet_3030 a7706c3c7e921b84ff6101c8958db631 232 SUPERFAMILY SSF48317 44 231 8.63E-19 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Amet_3030 a7706c3c7e921b84ff6101c8958db631 232 SMART SM00014 93 228 1.1E-4 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amet_3157 18985876b6e767c9ee58d9cf687cd907 583 SUPERFAMILY SSF56228 7 206 3.66E-48 T 12-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Amet_3157 18985876b6e767c9ee58d9cf687cd907 583 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 7 203 3.8E-56 T 12-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_3157 18985876b6e767c9ee58d9cf687cd907 583 Gene3D G3DSA:1.10.599.10 431 583 6.3E-7 T 12-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Amet_3157 18985876b6e767c9ee58d9cf687cd907 583 Gene3D G3DSA:1.10.569.10 239 430 6.1E-36 T 12-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Amet_3157 18985876b6e767c9ee58d9cf687cd907 583 SUPERFAMILY SSF48310 210 572 7.32E-69 T 12-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_3157 18985876b6e767c9ee58d9cf687cd907 583 Gene3D G3DSA:3.60.9.10 5 209 6.1E-52 T 12-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Amet_3157 18985876b6e767c9ee58d9cf687cd907 583 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 218 570 2.9E-47 T 12-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_3157 18985876b6e767c9ee58d9cf687cd907 583 SMART SM00790 7 205 1.1E-56 T 12-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Amet_0864 9fb6dd39df4c1221093f6d61056f5591 96 Gene3D G3DSA:1.10.10.10 5 68 5.1E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0864 9fb6dd39df4c1221093f6d61056f5591 96 SUPERFAMILY SSF46785 6 70 9.98E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0864 9fb6dd39df4c1221093f6d61056f5591 96 Pfam PF01726 LexA DNA binding domain 6 65 1.2E-12 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Amet_1228 a65821aad6e8e4867cc2f9da4e591865 241 SUPERFAMILY SSF56784 3 232 1.13E-32 T 12-10-2018 IPR036412 HAD-like superfamily Amet_1228 a65821aad6e8e4867cc2f9da4e591865 241 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 195 6.4E-33 T 12-10-2018 Amet_1228 a65821aad6e8e4867cc2f9da4e591865 241 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 206 2.0E-53 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Amet_1228 a65821aad6e8e4867cc2f9da4e591865 241 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 193 1.1E-18 T 12-10-2018 Amet_1228 a65821aad6e8e4867cc2f9da4e591865 241 Gene3D G3DSA:3.40.50.1000 7 207 1.8E-37 T 12-10-2018 IPR023214 HAD superfamily Amet_1228 a65821aad6e8e4867cc2f9da4e591865 241 Gene3D G3DSA:1.20.1440.100 17 93 1.8E-37 T 12-10-2018 Amet_1196 a1721172852dafbb59d0e318a9eb2be0 314 Pfam PF00892 EamA-like transporter family 8 144 9.3E-27 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_1196 a1721172852dafbb59d0e318a9eb2be0 314 Pfam PF00892 EamA-like transporter family 157 290 5.0E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_1196 a1721172852dafbb59d0e318a9eb2be0 314 SUPERFAMILY SSF103481 43 146 9.15E-16 T 12-10-2018 Amet_1196 a1721172852dafbb59d0e318a9eb2be0 314 SUPERFAMILY SSF103481 197 292 1.26E-11 T 12-10-2018 Amet_2116 677bd9d1d238c8df406474deffa64eb5 62 SMART SM00530 4 57 1.7E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2116 677bd9d1d238c8df406474deffa64eb5 62 Gene3D G3DSA:1.10.260.40 1 60 3.1E-11 T 12-10-2018 Amet_2116 677bd9d1d238c8df406474deffa64eb5 62 SUPERFAMILY SSF47413 11 60 1.18E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2116 677bd9d1d238c8df406474deffa64eb5 62 Pfam PF01381 Helix-turn-helix 11 57 3.7E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1110 b1637a1ad02cb7ab59a4fd75a603b316 149 Pfam PF01047 MarR family 36 94 8.6E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1110 b1637a1ad02cb7ab59a4fd75a603b316 149 SUPERFAMILY SSF46785 13 146 1.71E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1110 b1637a1ad02cb7ab59a4fd75a603b316 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1110 b1637a1ad02cb7ab59a4fd75a603b316 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1110 b1637a1ad02cb7ab59a4fd75a603b316 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1110 b1637a1ad02cb7ab59a4fd75a603b316 149 Gene3D G3DSA:1.10.10.10 1 145 1.4E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1110 b1637a1ad02cb7ab59a4fd75a603b316 149 SMART SM00347 29 129 6.6E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_0231 757755e401f66d43232c6bf4e5c1f1cd 646 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 22 635 1.3E-165 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Amet_0231 757755e401f66d43232c6bf4e5c1f1cd 646 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 132 557 1.0E-70 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_1605 ea6809633404b3a57b72dbebd006b1e2 90 SUPERFAMILY SSF48295 1 44 1.1E-6 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Amet_2922 499eef5a9a0f7dedced83dcb4e8ee616 295 SUPERFAMILY SSF141130 4 291 5.36E-89 T 12-10-2018 Amet_2922 499eef5a9a0f7dedced83dcb4e8ee616 295 Gene3D G3DSA:2.60.120.580 116 211 1.2E-35 T 12-10-2018 Amet_2922 499eef5a9a0f7dedced83dcb4e8ee616 295 Gene3D G3DSA:2.60.120.580 1 109 1.3E-28 T 12-10-2018 Amet_2922 499eef5a9a0f7dedced83dcb4e8ee616 295 Pfam PF03069 Acetamidase/Formamidase family 148 221 1.8E-20 T 12-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Amet_2922 499eef5a9a0f7dedced83dcb4e8ee616 295 Pfam PF03069 Acetamidase/Formamidase family 18 139 2.2E-12 T 12-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Amet_2922 499eef5a9a0f7dedced83dcb4e8ee616 295 Gene3D G3DSA:3.10.28.20 213 294 1.3E-22 T 12-10-2018 Amet_4213 99e834c85ae460db01e20f07b0f35fc8 429 SUPERFAMILY SSF51338 1 427 8.65E-31 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4213 99e834c85ae460db01e20f07b0f35fc8 429 Gene3D G3DSA:2.30.40.10 9 421 1.1E-144 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4213 99e834c85ae460db01e20f07b0f35fc8 429 Pfam PF01979 Amidohydrolase family 51 420 1.9E-35 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_4213 99e834c85ae460db01e20f07b0f35fc8 429 SUPERFAMILY SSF51556 55 367 5.3E-105 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_4213 99e834c85ae460db01e20f07b0f35fc8 429 Gene3D G3DSA:3.20.20.140 56 368 1.1E-144 T 12-10-2018 Amet_4213 99e834c85ae460db01e20f07b0f35fc8 429 ProSitePatterns PS00482 Dihydroorotase signature 1. 58 66 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4213 99e834c85ae460db01e20f07b0f35fc8 429 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 424 43.8 T 12-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_4213 99e834c85ae460db01e20f07b0f35fc8 429 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 424 1.6E-132 T 12-10-2018 Amet_4213 99e834c85ae460db01e20f07b0f35fc8 429 ProSitePatterns PS00483 Dihydroorotase signature 2. 303 314 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Amet_1920 a4eec83c69594649f942831a4d172df1 238 Pfam PF12730 ABC-2 family transporter protein 7 182 4.7E-28 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Amet_0546 3acb61f59dd65255087e4f77f2594bab 236 Pfam PF00072 Response regulator receiver domain 6 114 6.9E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0546 3acb61f59dd65255087e4f77f2594bab 236 SUPERFAMILY SSF46894 131 232 1.16E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_0546 3acb61f59dd65255087e4f77f2594bab 236 Gene3D G3DSA:1.10.10.10 132 236 3.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0546 3acb61f59dd65255087e4f77f2594bab 236 SUPERFAMILY SSF52172 3 130 1.15E-42 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0546 3acb61f59dd65255087e4f77f2594bab 236 SMART SM00862 154 230 2.6E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_0546 3acb61f59dd65255087e4f77f2594bab 236 SMART SM00448 4 114 1.1E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0546 3acb61f59dd65255087e4f77f2594bab 236 Gene3D G3DSA:3.40.50.2300 1 131 2.5E-39 T 12-10-2018 Amet_0546 3acb61f59dd65255087e4f77f2594bab 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 2.3E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3035 689afae36dab04391e62075e44a61fcc 91 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 8 90 9.8E-30 T 12-10-2018 IPR022477 Sporulation protein YqfC Amet_3035 689afae36dab04391e62075e44a61fcc 91 Gene3D G3DSA:2.60.40.2000 38 89 2.8E-5 T 12-10-2018 IPR038705 YabP superfamily Amet_3035 689afae36dab04391e62075e44a61fcc 91 Pfam PF07873 YabP family 26 89 2.9E-19 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC Amet_2887 532e22471729177f0e6c13b02fe18b46 311 Pfam PF01795 MraW methylase family 2 310 1.5E-128 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amet_2887 532e22471729177f0e6c13b02fe18b46 311 PIRSF PIRSF004486 1 311 7.5E-118 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amet_2887 532e22471729177f0e6c13b02fe18b46 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 311 40.438 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amet_2887 532e22471729177f0e6c13b02fe18b46 311 Gene3D G3DSA:3.40.50.150 5 307 2.5E-110 T 12-10-2018 Amet_2887 532e22471729177f0e6c13b02fe18b46 311 SUPERFAMILY SSF81799 114 215 1.7E-36 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Amet_2887 532e22471729177f0e6c13b02fe18b46 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 310 1.3E-120 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Amet_2887 532e22471729177f0e6c13b02fe18b46 311 Gene3D G3DSA:1.10.150.170 112 217 2.5E-110 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Amet_2887 532e22471729177f0e6c13b02fe18b46 311 SUPERFAMILY SSF53335 5 311 1.27E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0582 3f022ee918b4eed6f29c49d4eb9d9191 580 SUPERFAMILY SSF103190 76 181 3.4E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_0582 3f022ee918b4eed6f29c49d4eb9d9191 580 Gene3D G3DSA:1.20.1480.50 179 278 5.9E-9 T 12-10-2018 Amet_0582 3f022ee918b4eed6f29c49d4eb9d9191 580 SMART SM00283 304 579 2.5E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0582 3f022ee918b4eed6f29c49d4eb9d9191 580 SUPERFAMILY SSF58104 248 579 1.22E-68 T 12-10-2018 Amet_0582 3f022ee918b4eed6f29c49d4eb9d9191 580 Gene3D G3DSA:1.10.287.950 279 579 2.3E-63 T 12-10-2018 Amet_0582 3f022ee918b4eed6f29c49d4eb9d9191 580 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 377 532 1.6E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0582 3f022ee918b4eed6f29c49d4eb9d9191 580 Pfam PF17201 Cache 3/Cache 2 fusion domain 76 193 1.2E-33 T 12-10-2018 IPR033462 Cache 3/Cache 2 fusion domain Amet_3235 7b055b0a7d9aff8b07282e4d90383d01 129 SUPERFAMILY SSF52821 6 121 9.56E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_3235 7b055b0a7d9aff8b07282e4d90383d01 129 Gene3D G3DSA:3.40.250.10 15 127 4.7E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_3235 7b055b0a7d9aff8b07282e4d90383d01 129 Pfam PF00581 Rhodanese-like domain 39 121 9.3E-17 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3235 7b055b0a7d9aff8b07282e4d90383d01 129 SMART SM00450 31 127 2.8E-21 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_2192 970bf4782dfa9c11e751039ff3acbf39 259 TIGRFAM TIGR01895 cas_Cas5t: CRISPR-associated protein Cas5, subtype I-B/TNEAP 6 232 8.0E-33 T 12-10-2018 IPR013337 CRISPR-associated protein Cas5, Tneap type Amet_2192 970bf4782dfa9c11e751039ff3acbf39 259 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 9 172 1.7E-7 T 12-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Amet_2192 970bf4782dfa9c11e751039ff3acbf39 259 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 7 47 1.3E-14 T 12-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal Amet_0477 28368898d10836a58a88031caf053a67 328 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 7 325 1.9E-88 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Amet_0477 28368898d10836a58a88031caf053a67 328 SUPERFAMILY SSF51556 5 327 9.83E-76 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_0477 28368898d10836a58a88031caf053a67 328 Gene3D G3DSA:3.20.20.140 2 327 1.2E-92 T 12-10-2018 Amet_2759 0559d3722ded06c2418956afc8628dd4 335 Pfam PF02504 Fatty acid synthesis protein 1 318 2.7E-113 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Amet_2759 0559d3722ded06c2418956afc8628dd4 335 SUPERFAMILY SSF53659 1 329 3.87E-99 T 12-10-2018 Amet_2759 0559d3722ded06c2418956afc8628dd4 335 PIRSF PIRSF002465 1 333 7.5E-122 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Amet_2759 0559d3722ded06c2418956afc8628dd4 335 Gene3D G3DSA:3.40.718.10 1 333 3.4E-131 T 12-10-2018 Amet_2759 0559d3722ded06c2418956afc8628dd4 335 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 330 3.5E-111 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Amet_2759 0559d3722ded06c2418956afc8628dd4 335 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 335 141.917 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Amet_4780 600f98bfa579f60178069ff9ffbba595 114 SUPERFAMILY SSF82607 19 113 2.35E-32 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amet_4780 600f98bfa579f60178069ff9ffbba595 114 PIRSF PIRSF004555 11 114 1.3E-39 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amet_4780 600f98bfa579f60178069ff9ffbba595 114 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 10 113 7.0E-28 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amet_4780 600f98bfa579f60178069ff9ffbba595 114 Gene3D G3DSA:3.30.1310.10 9 114 4.8E-39 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Amet_4780 600f98bfa579f60178069ff9ffbba595 114 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 13 107 23.395 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amet_4780 600f98bfa579f60178069ff9ffbba595 114 Pfam PF02575 YbaB/EbfC DNA-binding family 19 109 5.6E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Amet_0500 a25573ecbffd25bb0323037179f08974 261 SMART SM00346 6 96 6.0E-8 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amet_0500 a25573ecbffd25bb0323037179f08974 261 SUPERFAMILY SSF46785 8 79 7.64E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0500 a25573ecbffd25bb0323037179f08974 261 Pfam PF01614 Bacterial transcriptional regulator 125 245 1.4E-27 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal Amet_0500 a25573ecbffd25bb0323037179f08974 261 SUPERFAMILY SSF55781 71 249 3.92E-41 T 12-10-2018 Amet_0500 a25573ecbffd25bb0323037179f08974 261 Gene3D G3DSA:3.30.450.40 78 250 9.2E-49 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_0500 a25573ecbffd25bb0323037179f08974 261 Pfam PF09339 IclR helix-turn-helix domain 9 58 4.3E-9 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Amet_0500 a25573ecbffd25bb0323037179f08974 261 Gene3D G3DSA:1.10.10.10 4 77 8.8E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0797 311ff2ebf3c80b5de6d3d18841b44435 631 SUPERFAMILY SSF53649 233 545 1.28E-54 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Amet_0797 311ff2ebf3c80b5de6d3d18841b44435 631 Pfam PF00884 Sulfatase 235 528 8.2E-33 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Amet_0797 311ff2ebf3c80b5de6d3d18841b44435 631 PIRSF PIRSF005091 9 621 1.4E-135 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like Amet_0797 311ff2ebf3c80b5de6d3d18841b44435 631 Gene3D G3DSA:3.40.720.10 229 534 1.0E-67 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Amet_2864 b426aa05f6d3cd5df8e54272a790e774 252 Pfam PF07758 Protein of unknown function (DUF1614) 44 188 6.0E-11 T 12-10-2018 IPR011672 Protein of unknown function DUF1614 Amet_3889 746fee5de9e1fc5aa54cd9071bacf60d 305 SUPERFAMILY SSF51556 2 291 1.07E-48 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_3889 746fee5de9e1fc5aa54cd9071bacf60d 305 Gene3D G3DSA:3.20.20.140 3 292 9.8E-47 T 12-10-2018 Amet_3889 746fee5de9e1fc5aa54cd9071bacf60d 305 Pfam PF01979 Amidohydrolase family 2 291 5.8E-20 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_4755 9e9ea99c96ed14cc56215c49abd0d9a4 487 Pfam PF07435 YycH protein 4 368 1.9E-9 T 12-10-2018 IPR009996 Regulatory protein YycH Amet_0804 1abae9a7e52196a388d4f3dabc4d5197 236 SUPERFAMILY SSF53067 108 218 9.45E-15 T 12-10-2018 Amet_0804 1abae9a7e52196a388d4f3dabc4d5197 236 Gene3D G3DSA:3.30.420.40 95 189 1.5E-61 T 12-10-2018 Amet_0804 1abae9a7e52196a388d4f3dabc4d5197 236 SUPERFAMILY SSF53067 1 102 9.93E-29 T 12-10-2018 Amet_0804 1abae9a7e52196a388d4f3dabc4d5197 236 Pfam PF00814 Glycoprotease family 32 198 1.0E-31 T 12-10-2018 IPR000905 Gcp-like domain Amet_0804 1abae9a7e52196a388d4f3dabc4d5197 236 Gene3D G3DSA:3.30.420.40 3 222 1.5E-61 T 12-10-2018 Amet_0804 1abae9a7e52196a388d4f3dabc4d5197 236 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 220 9.8E-56 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Amet_1169 35c607c96c205148773cbc0efb39ea9f 337 Gene3D G3DSA:3.40.50.11900 224 330 1.7E-8 T 12-10-2018 Amet_1169 35c607c96c205148773cbc0efb39ea9f 337 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 4 228 2.3E-61 T 12-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Amet_3118 58da12963aa568c7c382de9ce22905d6 293 Pfam PF14903 WG containing repeat 143 171 0.043 T 12-10-2018 IPR032774 WG containing repeat Amet_3118 58da12963aa568c7c382de9ce22905d6 293 Pfam PF14903 WG containing repeat 109 143 8.0E-7 T 12-10-2018 IPR032774 WG containing repeat Amet_3118 58da12963aa568c7c382de9ce22905d6 293 Pfam PF14903 WG containing repeat 59 86 4.5E-5 T 12-10-2018 IPR032774 WG containing repeat Amet_2276 9dc80ca306a06a65ecd856e4ff04b015 141 SUPERFAMILY SSF55874 29 132 1.12E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2276 9dc80ca306a06a65ecd856e4ff04b015 141 Pfam PF13581 Histidine kinase-like ATPase domain 15 122 3.7E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2276 9dc80ca306a06a65ecd856e4ff04b015 141 Gene3D G3DSA:3.30.565.10 6 137 9.4E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0482 cabab5af57308ba0d6ba59307ba6af59 270 SUPERFAMILY SSF52402 3 237 3.09E-38 T 12-10-2018 Amet_0482 cabab5af57308ba0d6ba59307ba6af59 270 Pfam PF00764 Arginosuccinate synthase 22 167 2.6E-6 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Amet_0482 cabab5af57308ba0d6ba59307ba6af59 270 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 6 261 1.2E-78 T 12-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 Amet_0482 cabab5af57308ba0d6ba59307ba6af59 270 PIRSF PIRSF006661 1 270 1.8E-101 T 12-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 Amet_0482 cabab5af57308ba0d6ba59307ba6af59 270 Gene3D G3DSA:3.40.50.620 13 172 2.2E-26 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_0855 915a652bf2c480a814beed620ede230a 128 Pfam PF12844 Helix-turn-helix domain 10 75 4.4E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0855 915a652bf2c480a814beed620ede230a 128 SUPERFAMILY SSF47413 5 76 1.77E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0855 915a652bf2c480a814beed620ede230a 128 Gene3D G3DSA:1.10.260.40 6 116 2.2E-15 T 12-10-2018 Amet_0855 915a652bf2c480a814beed620ede230a 128 SMART SM00530 10 70 1.3E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_1197 f120cf72a044baef54a2daea5be769be 182 Pfam PF00583 Acetyltransferase (GNAT) family 49 147 1.3E-9 T 12-10-2018 IPR000182 GNAT domain Amet_1197 f120cf72a044baef54a2daea5be769be 182 Gene3D G3DSA:3.40.630.30 12 182 9.5E-27 T 12-10-2018 Amet_1197 f120cf72a044baef54a2daea5be769be 182 SUPERFAMILY SSF55729 12 177 3.09E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2929 e418733efb649828cef8ad8b4d94b8f2 233 Pfam PF11167 Protein of unknown function (DUF2953) 147 188 9.5E-9 T 12-10-2018 IPR021338 Protein of unknown function DUF2953 Amet_3074 fa675bd631a64cb1bed950d95d17abe0 369 Gene3D G3DSA:3.30.300.210 221 344 8.4E-13 T 12-10-2018 IPR038501 Spore germination GerAC superfamily Amet_3074 fa675bd631a64cb1bed950d95d17abe0 369 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 206 356 3.1E-20 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_3074 fa675bd631a64cb1bed950d95d17abe0 369 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 356 2.0E-61 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_3076 4ba1c9d33fd37083169527d6c8c22756 360 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 2 354 8.8E-62 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_3076 4ba1c9d33fd37083169527d6c8c22756 360 Pfam PF03845 Spore germination protein 13 309 2.2E-20 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_2174 ff668eb9198b99b84063e61fb19fb977 284 SMART SM00729 72 277 8.7E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_2174 ff668eb9198b99b84063e61fb19fb977 284 Gene3D G3DSA:3.20.20.70 69 279 5.5E-35 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2174 ff668eb9198b99b84063e61fb19fb977 284 PIRSF PIRSF004869 1 284 1.1E-73 T 12-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted Amet_2174 ff668eb9198b99b84063e61fb19fb977 284 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 9 283 6.3E-71 T 12-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme Amet_2174 ff668eb9198b99b84063e61fb19fb977 284 Pfam PF13353 4Fe-4S single cluster domain 80 174 1.0E-6 T 12-10-2018 Amet_2174 ff668eb9198b99b84063e61fb19fb977 284 SUPERFAMILY SSF102114 57 278 1.57E-32 T 12-10-2018 Amet_2174 ff668eb9198b99b84063e61fb19fb977 284 Pfam PF04055 Radical SAM superfamily 81 233 3.6E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3511 99ef292b46d912d3f80a69ee8643bd3f 518 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 23 449 2.8E-117 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 195 210 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 240 265 1.3E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 215 1.3E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 68 87 1.3E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 107 126 1.3E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 107 1.3E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 237 1.3E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 70 266 1.2E-85 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 243 255 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 6.4E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 166 178 6.4E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 66 75 6.4E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 152 6.4E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 138 6.4E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 256 266 6.4E-20 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Amet_2707 763190a6d2e9aee8ba1252fee3f0a06d 267 Pfam PF00813 FliP family 70 262 1.1E-81 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Amet_1908 36eb27a9291771c6184bb31a64aa886b 238 SUPERFAMILY SSF46689 17 76 1.8E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1908 36eb27a9291771c6184bb31a64aa886b 238 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.9E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1908 36eb27a9291771c6184bb31a64aa886b 238 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1908 36eb27a9291771c6184bb31a64aa886b 238 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1908 36eb27a9291771c6184bb31a64aa886b 238 Gene3D G3DSA:1.10.357.10 14 221 7.0E-19 T 12-10-2018 Amet_1908 36eb27a9291771c6184bb31a64aa886b 238 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amet_2028 a3c445e3bbde582bf69990dfb9481a15 708 SUPERFAMILY SSF56821 2 707 4.35E-232 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Amet_2028 a3c445e3bbde582bf69990dfb9481a15 708 Gene3D G3DSA:1.10.8.190 1 102 1.3E-32 T 12-10-2018 Amet_2028 a3c445e3bbde582bf69990dfb9481a15 708 TIGRFAM TIGR00316 cdhC: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit 294 702 3.7E-136 T 12-10-2018 IPR004461 CO dehydrogenase/acetyl-CoA synthase complex beta subunit GO:0006084|GO:0018492 KEGG: 00720+2.3.1.169|MetaCyc: PWY-7784 Amet_2028 a3c445e3bbde582bf69990dfb9481a15 708 Gene3D G3DSA:3.40.50.2030 103 288 7.2E-60 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_2028 a3c445e3bbde582bf69990dfb9481a15 708 Gene3D G3DSA:3.30.1650.10 295 473 2.4E-72 T 12-10-2018 IPR038571 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase, domain 3 superfamily KEGG: 00720+2.3.1.169|MetaCyc: PWY-7784 Amet_2028 a3c445e3bbde582bf69990dfb9481a15 708 Gene3D G3DSA:3.40.970.20 474 563 1.5E-38 T 12-10-2018 Amet_2028 a3c445e3bbde582bf69990dfb9481a15 708 Gene3D G3DSA:3.40.1470.10 579 708 3.8E-50 T 12-10-2018 Amet_2028 a3c445e3bbde582bf69990dfb9481a15 708 Pfam PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit 297 452 3.3E-71 T 12-10-2018 IPR004461 CO dehydrogenase/acetyl-CoA synthase complex beta subunit GO:0006084|GO:0018492 KEGG: 00720+2.3.1.169|MetaCyc: PWY-7784 Amet_2019 dfa0df2beb380644bb133ad5806a244a 209 Pfam PF04961 Formiminotransferase-cyclodeaminase 7 187 6.2E-67 T 12-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Amet_2019 dfa0df2beb380644bb133ad5806a244a 209 Gene3D G3DSA:1.20.120.680 7 208 8.7E-67 T 12-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Amet_2019 dfa0df2beb380644bb133ad5806a244a 209 SUPERFAMILY SSF101262 3 207 2.35E-60 T 12-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Amet_0081 91367b2a78eae56ffc29ce2f385a442f 476 Gene3D G3DSA:3.40.640.10 4 280 6.2E-106 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0081 91367b2a78eae56ffc29ce2f385a442f 476 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 5 309 8.3E-73 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Amet_0081 91367b2a78eae56ffc29ce2f385a442f 476 Gene3D G3DSA:3.90.105.10 409 464 3.7E-19 T 12-10-2018 Amet_0081 91367b2a78eae56ffc29ce2f385a442f 476 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 391 456 5.9E-12 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Amet_0081 91367b2a78eae56ffc29ce2f385a442f 476 SUPERFAMILY SSF53383 5 375 5.59E-81 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_0081 91367b2a78eae56ffc29ce2f385a442f 476 SUPERFAMILY SSF55904 331 473 5.36E-32 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Amet_0940 0f9efbaae9e720ba0ad9b3f6530c00f9 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 627 1.1E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0940 0f9efbaae9e720ba0ad9b3f6530c00f9 678 SMART SM00283 402 677 4.3E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_0940 0f9efbaae9e720ba0ad9b3f6530c00f9 678 Gene3D G3DSA:1.20.1480.50 281 379 3.3E-7 T 12-10-2018 Amet_0940 0f9efbaae9e720ba0ad9b3f6530c00f9 678 SUPERFAMILY SSF103190 161 292 1.88E-18 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_0940 0f9efbaae9e720ba0ad9b3f6530c00f9 678 SUPERFAMILY SSF58104 328 421 1.31E-5 T 12-10-2018 Amet_0940 0f9efbaae9e720ba0ad9b3f6530c00f9 678 SMART SM00304 318 373 0.0046 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Amet_0940 0f9efbaae9e720ba0ad9b3f6530c00f9 678 SUPERFAMILY SSF58104 404 677 1.19E-60 T 12-10-2018 Amet_0940 0f9efbaae9e720ba0ad9b3f6530c00f9 678 Gene3D G3DSA:1.10.287.950 414 677 9.4E-57 T 12-10-2018 Amet_0940 0f9efbaae9e720ba0ad9b3f6530c00f9 678 Pfam PF17203 Single cache domain 3 196 293 1.8E-12 T 12-10-2018 IPR033463 Single cache domain 3 Amet_2036 7e8ca4c55883d8fe3dbac7af77cd753e 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 326 4.5E-40 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2036 7e8ca4c55883d8fe3dbac7af77cd753e 331 Gene3D G3DSA:1.10.3720.10 93 321 3.6E-20 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2036 7e8ca4c55883d8fe3dbac7af77cd753e 331 SUPERFAMILY SSF161098 100 313 3.71E-14 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3493 ffb865ba934080b26927eeb14ec15008 293 Gene3D G3DSA:3.40.50.620 2 227 2.4E-53 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3493 ffb865ba934080b26927eeb14ec15008 293 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 27 245 9.5E-39 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Amet_3493 ffb865ba934080b26927eeb14ec15008 293 SUPERFAMILY SSF52402 2 226 8.13E-53 T 12-10-2018 Amet_3493 ffb865ba934080b26927eeb14ec15008 293 PIRSF PIRSF002936 1 231 3.7E-80 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Amet_3493 ffb865ba934080b26927eeb14ec15008 293 PIRSF PIRSF002936 228 293 8.6E-17 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Amet_0576 96b1a07568208ae763a0bac66fca14ec 237 SUPERFAMILY SSF51366 1 233 1.61E-71 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amet_0576 96b1a07568208ae763a0bac66fca14ec 237 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 230 1.1E-86 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Amet_0576 96b1a07568208ae763a0bac66fca14ec 237 Gene3D G3DSA:3.20.20.70 1 234 1.3E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0576 96b1a07568208ae763a0bac66fca14ec 237 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 235 35.333 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Amet_0576 96b1a07568208ae763a0bac66fca14ec 237 Pfam PF00977 Histidine biosynthesis protein 3 227 5.2E-78 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Amet_1126 a2fda2b4689115aff09bdb567ca8f6da 227 SUPERFAMILY SSF51206 2 147 6.42E-28 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like Amet_1126 a2fda2b4689115aff09bdb567ca8f6da 227 SUPERFAMILY SSF46785 152 225 3.78E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1126 a2fda2b4689115aff09bdb567ca8f6da 227 Gene3D G3DSA:2.60.120.1460 2 222 5.4E-56 T 12-10-2018 Amet_1126 a2fda2b4689115aff09bdb567ca8f6da 227 Pfam PF13545 Crp-like helix-turn-helix domain 156 223 5.9E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_1126 a2fda2b4689115aff09bdb567ca8f6da 227 SMART SM00419 169 217 1.1E-6 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Amet_1126 a2fda2b4689115aff09bdb567ca8f6da 227 Pfam PF00027 Cyclic nucleotide-binding domain 36 123 2.4E-10 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain Amet_3818 ff1360d2def9dc29c7b804aeadb33c3d 115 Gene3D G3DSA:1.10.10.10 1 59 1.8E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3818 ff1360d2def9dc29c7b804aeadb33c3d 115 Pfam PF08279 HTH domain 3 56 1.3E-14 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Amet_3818 ff1360d2def9dc29c7b804aeadb33c3d 115 SUPERFAMILY SSF46785 2 55 7.64E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3551 8ee645b2191a751dd5600e593b69a473 640 PIRSF PIRSF018968 1 640 3.3E-104 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 Amet_3551 8ee645b2191a751dd5600e593b69a473 640 Pfam PF02687 FtsX-like permease family 86 179 1.3E-5 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_3349 d6b03a19328eca3c09d44c25e5156e32 225 Pfam PF02517 CAAX protease self-immunity 113 212 5.6E-14 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_1042 44716e4b8510bf3cb23d1327965c2971 271 Pfam PF02517 CAAX protease self-immunity 139 225 2.2E-19 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 47.764 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 3.4E-48 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 SUPERFAMILY SSF53098 1 155 1.24E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2337 31cfe1981bca158036fa5916b278dce2 164 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 1.4E-54 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 6.2E-34 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 6.2E-34 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 6.2E-34 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 6.2E-34 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 6.2E-34 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 148 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Amet_2337 31cfe1981bca158036fa5916b278dce2 164 Gene3D G3DSA:3.30.420.10 1 158 3.2E-57 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Amet_3625 ab9e9fc688d08b62b6b1de00ba6e898d 230 Gene3D G3DSA:1.25.40.10 64 229 3.8E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3625 ab9e9fc688d08b62b6b1de00ba6e898d 230 SUPERFAMILY SSF48452 99 200 7.59E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3625 ab9e9fc688d08b62b6b1de00ba6e898d 230 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 7 219 1.5E-65 T 12-10-2018 IPR018708 Protein of unknown function DUF2225 Amet_3774 32a4566bd34edd02b7f290138c086f22 319 Gene3D G3DSA:3.40.50.1980 162 317 2.1E-26 T 12-10-2018 Amet_3774 32a4566bd34edd02b7f290138c086f22 319 Pfam PF01497 Periplasmic binding protein 78 292 4.0E-23 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain Amet_3774 32a4566bd34edd02b7f290138c086f22 319 Gene3D G3DSA:3.40.50.1980 32 161 1.9E-27 T 12-10-2018 Amet_3774 32a4566bd34edd02b7f290138c086f22 319 SUPERFAMILY SSF53807 41 305 1.96E-48 T 12-10-2018 Amet_2776 0e507fdf82b15e7e0829029d2cd1cb17 211 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 22 123 1.0E-26 T 12-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amet_2776 0e507fdf82b15e7e0829029d2cd1cb17 211 SMART SM00983 134 205 1.7E-15 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amet_2776 0e507fdf82b15e7e0829029d2cd1cb17 211 SUPERFAMILY SSF63999 2 130 3.4E-34 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amet_2776 0e507fdf82b15e7e0829029d2cd1cb17 211 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 142 204 1.2E-13 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amet_2776 0e507fdf82b15e7e0829029d2cd1cb17 211 SUPERFAMILY SSF63862 147 210 2.62E-10 T 12-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amet_2776 0e507fdf82b15e7e0829029d2cd1cb17 211 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 207 3.1E-55 T 12-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amet_2776 0e507fdf82b15e7e0829029d2cd1cb17 211 Gene3D G3DSA:3.40.50.10240 1 211 9.5E-66 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Amet_2365 a38ca0210fb90d653d8fd05f51bb33fd 410 PIRSF PIRSF000412 1 410 6.2E-172 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Amet_2365 a38ca0210fb90d653d8fd05f51bb33fd 410 Gene3D G3DSA:3.40.640.10 35 285 1.7E-189 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_2365 a38ca0210fb90d653d8fd05f51bb33fd 410 Gene3D G3DSA:3.90.1150.10 8 391 1.7E-189 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_2365 a38ca0210fb90d653d8fd05f51bb33fd 410 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 5 410 53.245 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Amet_2365 a38ca0210fb90d653d8fd05f51bb33fd 410 Pfam PF00464 Serine hydroxymethyltransferase 6 381 8.3E-177 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Amet_2365 a38ca0210fb90d653d8fd05f51bb33fd 410 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 220 236 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Amet_2365 a38ca0210fb90d653d8fd05f51bb33fd 410 SUPERFAMILY SSF53383 2 409 3.58E-181 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_0977 cf54d8fd7bd8ffcb31a2ecc6cf259ff1 665 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 15 659 40.679 T 12-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amet_0977 cf54d8fd7bd8ffcb31a2ecc6cf259ff1 665 PIRSF PIRSF000906 12 660 0.0 T 12-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amet_0977 cf54d8fd7bd8ffcb31a2ecc6cf259ff1 665 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 17 657 0.0 T 12-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Amet_0977 cf54d8fd7bd8ffcb31a2ecc6cf259ff1 665 SUPERFAMILY SSF56300 197 573 6.53E-9 T 12-10-2018 Amet_3916 c8249044591609607bf6a4df9a74a00c 241 SUPERFAMILY SSF46689 5 41 6.27E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_3916 c8249044591609607bf6a4df9a74a00c 241 Gene3D G3DSA:3.20.80.10 85 238 5.6E-12 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amet_3916 c8249044591609607bf6a4df9a74a00c 241 Gene3D G3DSA:1.10.10.60 2 53 2.9E-10 T 12-10-2018 Amet_3916 c8249044591609607bf6a4df9a74a00c 241 SUPERFAMILY SSF55136 141 231 3.92E-8 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amet_3916 c8249044591609607bf6a4df9a74a00c 241 Pfam PF06445 GyrI-like small molecule binding domain 108 230 1.3E-6 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain Amet_3916 c8249044591609607bf6a4df9a74a00c 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 21 37 3.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3916 c8249044591609607bf6a4df9a74a00c 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 6 21 3.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Amet_3916 c8249044591609607bf6a4df9a74a00c 241 SMART SM00871 71 235 3.3E-8 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.1E-27 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.1E-27 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.1E-27 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 PRINTS PR00125 ATP synthase delta subunit signature 5 24 4.1E-27 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.1E-27 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 Gene3D G3DSA:1.10.520.20 5 98 9.6E-16 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 177 20.129 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 5 175 9.0E-42 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 175 3.5E-50 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_0350 1c7aeab47c27cfab70201d1f6078ad07 180 SUPERFAMILY SSF47928 3 104 4.97E-24 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Amet_4785 607f8621020e740c81c531d4d0cc3f16 204 SUPERFAMILY SSF53163 10 197 1.44E-52 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily Amet_4785 607f8621020e740c81c531d4d0cc3f16 204 Pfam PF06866 Protein of unknown function (DUF1256) 18 179 4.9E-58 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 Amet_4785 607f8621020e740c81c531d4d0cc3f16 204 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 41 181 1.5E-64 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 Amet_1905 c8b36b9b5dd9baf36b45b2d8383ece36 298 Gene3D G3DSA:3.30.200.20 2 94 1.0E-6 T 12-10-2018 Amet_1905 c8b36b9b5dd9baf36b45b2d8383ece36 298 Pfam PF01636 Phosphotransferase enzyme family 23 261 5.0E-22 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Amet_1905 c8b36b9b5dd9baf36b45b2d8383ece36 298 Gene3D G3DSA:3.90.1200.10 113 297 3.4E-22 T 12-10-2018 Amet_1905 c8b36b9b5dd9baf36b45b2d8383ece36 298 SUPERFAMILY SSF56112 22 254 5.49E-26 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Amet_0848 78ab55f250295994a71bd576fdb27863 472 Pfam PF12161 HsdM N-terminal domain 7 108 4.1E-9 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain Amet_0848 78ab55f250295994a71bd576fdb27863 472 Gene3D G3DSA:3.40.50.150 145 430 1.2E-72 T 12-10-2018 Amet_0848 78ab55f250295994a71bd576fdb27863 472 Pfam PF02384 N-6 DNA Methylase 120 422 2.5E-77 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Amet_0848 78ab55f250295994a71bd576fdb27863 472 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 166 180 4.2E-14 T 12-10-2018 Amet_0848 78ab55f250295994a71bd576fdb27863 472 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 278 302 4.2E-14 T 12-10-2018 Amet_0848 78ab55f250295994a71bd576fdb27863 472 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 142 158 4.2E-14 T 12-10-2018 Amet_0848 78ab55f250295994a71bd576fdb27863 472 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 249 261 4.2E-14 T 12-10-2018 Amet_0848 78ab55f250295994a71bd576fdb27863 472 SUPERFAMILY SSF53335 4 465 1.39E-121 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0848 78ab55f250295994a71bd576fdb27863 472 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 252 258 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Amet_0848 78ab55f250295994a71bd576fdb27863 472 Gene3D G3DSA:1.20.1260.30 1 144 7.6E-45 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily Amet_3615 0841d03b95966de8981cdb351046fec5 314 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 314 93.091 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Amet_3615 0841d03b95966de8981cdb351046fec5 314 Pfam PF03186 CobD/Cbib protein 3 294 1.8E-101 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Amet_3615 0841d03b95966de8981cdb351046fec5 314 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 1 305 1.4E-79 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Amet_0604 5f33775505b94745ff2650d1c30b169e 451 Pfam PF00860 Permease family 22 399 1.2E-87 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Amet_0604 5f33775505b94745ff2650d1c30b169e 451 TIGRFAM TIGR03173 pbuX: xanthine permease 26 432 4.7E-133 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 Amet_0604 5f33775505b94745ff2650d1c30b169e 451 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 347 367 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Amet_0604 5f33775505b94745ff2650d1c30b169e 451 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 21 430 6.9E-104 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Amet_2907 94c6341af1be74b7623c562cff1f7af7 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 303 2.7E-37 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2907 94c6341af1be74b7623c562cff1f7af7 304 Gene3D G3DSA:1.10.3720.10 93 299 1.5E-28 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2907 94c6341af1be74b7623c562cff1f7af7 304 SUPERFAMILY SSF161098 97 290 8.5E-35 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2907 94c6341af1be74b7623c562cff1f7af7 304 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 79 2.7E-14 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Amet_0571 d95d67716e433e7886aedf60e6639081 209 Gene3D G3DSA:3.40.190.10 94 176 2.2E-77 T 12-10-2018 Amet_0571 d95d67716e433e7886aedf60e6639081 209 Pfam PF01634 ATP phosphoribosyltransferase 53 204 1.6E-54 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Amet_0571 d95d67716e433e7886aedf60e6639081 209 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 3 208 55.372 T 12-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Amet_0571 d95d67716e433e7886aedf60e6639081 209 Gene3D G3DSA:3.40.190.10 6 197 2.2E-77 T 12-10-2018 Amet_0571 d95d67716e433e7886aedf60e6639081 209 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 183 2.8E-64 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Amet_0571 d95d67716e433e7886aedf60e6639081 209 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 143 164 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Amet_0571 d95d67716e433e7886aedf60e6639081 209 SUPERFAMILY SSF53850 2 204 7.29E-68 T 12-10-2018 Amet_3948 a8b1d992b72074d34bd73b187b096bdd 505 SUPERFAMILY SSF52743 90 440 2.62E-54 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amet_3948 a8b1d992b72074d34bd73b187b096bdd 505 Pfam PF00082 Subtilase family 130 363 1.3E-23 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Amet_3948 a8b1d992b72074d34bd73b187b096bdd 505 Gene3D G3DSA:3.40.50.200 89 368 2.5E-26 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Amet_3437 f7e5977834640d76ee95f8bbaccf3c6e 863 Pfam PF01391 Collagen triple helix repeat (20 copies) 671 729 4.6E-8 T 12-10-2018 IPR008160 Collagen triple helix repeat Amet_3437 f7e5977834640d76ee95f8bbaccf3c6e 863 Pfam PF01391 Collagen triple helix repeat (20 copies) 161 218 1.2E-8 T 12-10-2018 IPR008160 Collagen triple helix repeat Amet_3437 f7e5977834640d76ee95f8bbaccf3c6e 863 Gene3D G3DSA:2.60.120.260 1 156 9.9E-6 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily Amet_2049 1baec8e271add4ce2330a18dc7990ba8 274 SUPERFAMILY SSF52540 8 251 2.83E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2049 1baec8e271add4ce2330a18dc7990ba8 274 Gene3D G3DSA:3.40.50.300 6 271 1.3E-78 T 12-10-2018 Amet_2049 1baec8e271add4ce2330a18dc7990ba8 274 SMART SM00382 36 244 1.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2049 1baec8e271add4ce2330a18dc7990ba8 274 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2049 1baec8e271add4ce2330a18dc7990ba8 274 Pfam PF00005 ABC transporter 27 180 4.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0971 2e3c8bdd00091232c92a469492f4e3c5 428 PIRSF PIRSF006066 1 428 1.6E-130 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_0971 2e3c8bdd00091232c92a469492f4e3c5 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 422 2.1E-122 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_0971 2e3c8bdd00091232c92a469492f4e3c5 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 6.6E-115 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_2407 2fb783a86ff01177bf60905713fab629 202 Pfam PF00589 Phage integrase family 19 183 4.9E-22 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_2407 2fb783a86ff01177bf60905713fab629 202 SUPERFAMILY SSF56349 19 196 8.24E-31 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_2407 2fb783a86ff01177bf60905713fab629 202 Gene3D G3DSA:1.10.443.10 13 199 6.6E-31 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_2191 69e6de8654cb302be2230a1c8f493630 294 TIGRFAM TIGR02585 cas_Cst2_DevR: CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP 14 290 1.5E-70 T 12-10-2018 IPR013414 CRISPR-associated protein Cas7, subtype I-B/Tneap Amet_2191 69e6de8654cb302be2230a1c8f493630 294 Pfam PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 11 225 7.8E-39 T 12-10-2018 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR Amet_2191 69e6de8654cb302be2230a1c8f493630 294 TIGRFAM TIGR01875 cas_MJ0381: CRISPR-associated autoregulator DevR family 15 224 6.6E-53 T 12-10-2018 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 SMART SM00387 423 529 7.0E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 Gene3D G3DSA:3.30.450.20 144 265 1.7E-5 T 12-10-2018 Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 SUPERFAMILY SSF47384 313 381 1.16E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 Gene3D G3DSA:3.30.565.10 377 528 8.9E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 Gene3D G3DSA:1.10.287.130 303 376 1.6E-15 T 12-10-2018 Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 526 1.2E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 5.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 5.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 5.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 SMART SM00388 317 382 3.8E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 SUPERFAMILY SSF55874 378 527 6.02E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4323 ac84b43a89b23429ecec5fb2fc22f950 530 Pfam PF00512 His Kinase A (phospho-acceptor) domain 317 380 9.1E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1289 562c224915d2c47948aa5bda652f9ecb 162 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 151 2.7E-29 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Amet_2620 96cf46948f13a819a2bbf1dee04f3903 334 Pfam PF05343 M42 glutamyl aminopeptidase 46 322 1.1E-93 T 12-10-2018 IPR008007 Peptidase M42 Amet_2620 96cf46948f13a819a2bbf1dee04f3903 334 Gene3D G3DSA:3.40.630.10 8 322 2.3E-118 T 12-10-2018 Amet_2620 96cf46948f13a819a2bbf1dee04f3903 334 PIRSF PIRSF001123 2 333 2.1E-107 T 12-10-2018 IPR008007 Peptidase M42 Amet_2620 96cf46948f13a819a2bbf1dee04f3903 334 SUPERFAMILY SSF101821 69 147 3.97E-16 T 12-10-2018 Amet_2620 96cf46948f13a819a2bbf1dee04f3903 334 Gene3D G3DSA:2.40.30.40 69 151 2.3E-118 T 12-10-2018 IPR023367 Peptidase M42, domain 2 Amet_2620 96cf46948f13a819a2bbf1dee04f3903 334 SUPERFAMILY SSF53187 7 329 1.48E-66 T 12-10-2018 Amet_2633 b0760d6bc7e67ff352a69cd5d6b0dde0 273 Gene3D G3DSA:3.40.50.970 27 242 3.2E-31 T 12-10-2018 Amet_2633 b0760d6bc7e67ff352a69cd5d6b0dde0 273 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 52 199 2.1E-37 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_2633 b0760d6bc7e67ff352a69cd5d6b0dde0 273 SUPERFAMILY SSF52518 14 233 4.11E-79 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_1272 ed1ec2402d8ffd816ac16d7374cba824 247 Pfam PF13483 Beta-lactamase superfamily domain 11 133 8.1E-8 T 12-10-2018 Amet_1272 ed1ec2402d8ffd816ac16d7374cba824 247 SUPERFAMILY SSF56281 9 220 4.9E-18 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_1272 ed1ec2402d8ffd816ac16d7374cba824 247 Gene3D G3DSA:3.60.15.10 2 233 1.8E-31 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_0643 30e795ce252468221727db05d7cae6ac 329 SUPERFAMILY SSF53850 35 328 5.24E-69 T 12-10-2018 Amet_0643 30e795ce252468221727db05d7cae6ac 329 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 326 3.2E-84 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amet_0643 30e795ce252468221727db05d7cae6ac 329 Gene3D G3DSA:3.40.190.10 40 326 1.1E-90 T 12-10-2018 Amet_0643 30e795ce252468221727db05d7cae6ac 329 Pfam PF16868 NMT1-like family 40 326 2.4E-86 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Amet_0643 30e795ce252468221727db05d7cae6ac 329 Gene3D G3DSA:3.40.190.10 122 260 1.1E-90 T 12-10-2018 Amet_3102 edd96bffbc06648dd3f5e997a641989b 189 Gene3D G3DSA:1.10.3210.10 1 140 4.7E-9 T 12-10-2018 Amet_3102 edd96bffbc06648dd3f5e997a641989b 189 Pfam PF01966 HD domain 21 87 5.6E-5 T 12-10-2018 IPR006674 HD domain Amet_3102 edd96bffbc06648dd3f5e997a641989b 189 TIGRFAM TIGR00277 HDIG: HDIG domain 18 87 4.4E-8 T 12-10-2018 IPR006675 HDIG domain Amet_3102 edd96bffbc06648dd3f5e997a641989b 189 SUPERFAMILY SSF109604 10 158 1.06E-13 T 12-10-2018 Amet_0683 182064c3dacfb9763342085c541dfe28 771 SUPERFAMILY SSF56003 115 769 4.32E-188 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Amet_0683 182064c3dacfb9763342085c541dfe28 771 Gene3D G3DSA:3.90.1170.50 1 123 2.5E-42 T 12-10-2018 Amet_0683 182064c3dacfb9763342085c541dfe28 771 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 19 123 8.9E-30 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_0683 182064c3dacfb9763342085c541dfe28 771 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 708 6.6E-159 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Amet_0683 182064c3dacfb9763342085c541dfe28 771 Gene3D G3DSA:3.30.365.10 452 624 5.8E-121 T 12-10-2018 Amet_0683 182064c3dacfb9763342085c541dfe28 771 SMART SM01008 19 123 1.1E-45 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Amet_0683 182064c3dacfb9763342085c541dfe28 771 Gene3D G3DSA:3.30.365.10 374 763 5.8E-121 T 12-10-2018 Amet_0683 182064c3dacfb9763342085c541dfe28 771 SUPERFAMILY SSF54665 3 143 9.55E-43 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Amet_0683 182064c3dacfb9763342085c541dfe28 771 Gene3D G3DSA:3.30.365.10 192 287 1.1E-78 T 12-10-2018 Amet_0683 182064c3dacfb9763342085c541dfe28 771 Gene3D G3DSA:3.30.365.10 129 356 1.1E-78 T 12-10-2018 Amet_3129 80468bd0588a37a9a9c1e0ed55d4f54c 383 SUPERFAMILY SSF48371 70 366 5.35E-6 T 12-10-2018 IPR016024 Armadillo-type fold Amet_2089 deb84c52ff266ab061d0ba53304dc0c8 454 SUPERFAMILY SSF103473 1 430 9.16E-29 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_2089 deb84c52ff266ab061d0ba53304dc0c8 454 Pfam PF13347 MFS/sugar transport protein 12 432 3.6E-123 T 12-10-2018 Amet_2089 deb84c52ff266ab061d0ba53304dc0c8 454 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 12 446 5.7E-89 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 Amet_2089 deb84c52ff266ab061d0ba53304dc0c8 454 Gene3D G3DSA:1.20.1250.20 12 429 6.7E-16 T 12-10-2018 Amet_3633 ff27fa8b19daef0aeb44cfb3b1aacfd4 173 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 124 143 5.6E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3633 ff27fa8b19daef0aeb44cfb3b1aacfd4 173 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 5.6E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3633 ff27fa8b19daef0aeb44cfb3b1aacfd4 173 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 91 5.6E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3633 ff27fa8b19daef0aeb44cfb3b1aacfd4 173 SUPERFAMILY SSF51306 25 171 6.8E-40 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Amet_3633 ff27fa8b19daef0aeb44cfb3b1aacfd4 173 ProSitePatterns PS00501 Signal peptidases I serine active site. 33 40 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Amet_3633 ff27fa8b19daef0aeb44cfb3b1aacfd4 173 Pfam PF00717 Peptidase S24-like 31 102 3.7E-13 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Amet_3633 ff27fa8b19daef0aeb44cfb3b1aacfd4 173 Gene3D G3DSA:2.10.109.10 32 164 1.9E-29 T 12-10-2018 Amet_3633 ff27fa8b19daef0aeb44cfb3b1aacfd4 173 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 166 1.7E-40 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Amet_3633 ff27fa8b19daef0aeb44cfb3b1aacfd4 173 ProSitePatterns PS00761 Signal peptidases I signature 3. 129 142 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Amet_2868 341203a6f69f44803f1e108f17db288e 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 86.394 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Amet_2868 341203a6f69f44803f1e108f17db288e 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 5.0E-67 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Amet_2868 341203a6f69f44803f1e108f17db288e 155 Pfam PF03477 ATP cone domain 50 136 6.4E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Amet_2630 43ed432ef2a2c5c1aa94cbbf5786d121 210 Gene3D G3DSA:3.40.50.1240 1 207 4.7E-65 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Amet_2630 43ed432ef2a2c5c1aa94cbbf5786d121 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 196 1.7E-61 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amet_2630 43ed432ef2a2c5c1aa94cbbf5786d121 210 SMART SM00855 3 157 1.7E-16 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Amet_2630 43ed432ef2a2c5c1aa94cbbf5786d121 210 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Amet_2630 43ed432ef2a2c5c1aa94cbbf5786d121 210 SUPERFAMILY SSF53254 1 203 6.02E-61 T 12-10-2018 IPR029033 Histidine phosphatase superfamily Amet_2630 43ed432ef2a2c5c1aa94cbbf5786d121 210 PIRSF PIRSF000709 1 194 9.3E-15 T 12-10-2018 Amet_0798 d3de56b57467982f6dccb08511b486b9 233 SUPERFAMILY SSF109998 35 177 1.79E-26 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Amet_0798 d3de56b57467982f6dccb08511b486b9 233 Gene3D G3DSA:1.10.4030.30 36 182 1.0E-22 T 12-10-2018 Amet_0798 d3de56b57467982f6dccb08511b486b9 233 Pfam PF13624 SurA N-terminal domain 5 154 3.1E-24 T 12-10-2018 Amet_4769 0a4730bc27988558b447e49ce70d7f5d 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 3.4E-23 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4769 0a4730bc27988558b447e49ce70d7f5d 149 Gene3D G3DSA:3.10.430.100 60 149 1.5E-30 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Amet_4769 0a4730bc27988558b447e49ce70d7f5d 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 1.5E-27 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal Amet_4769 0a4730bc27988558b447e49ce70d7f5d 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 26.779 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4769 0a4730bc27988558b447e49ce70d7f5d 149 Gene3D G3DSA:3.40.5.10 1 52 1.9E-24 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4769 0a4730bc27988558b447e49ce70d7f5d 149 SUPERFAMILY SSF55658 1 57 3.66E-18 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Amet_4769 0a4730bc27988558b447e49ce70d7f5d 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4769 0a4730bc27988558b447e49ce70d7f5d 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 1.7E-44 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4769 0a4730bc27988558b447e49ce70d7f5d 149 SUPERFAMILY SSF55653 57 148 1.96E-25 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Amet_4423 2a1e67e069353b7fc39c2511902f5b1a 273 SMART SM00871 119 269 2.5E-11 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding Amet_4423 2a1e67e069353b7fc39c2511902f5b1a 273 SMART SM00422 5 74 2.7E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_4423 2a1e67e069353b7fc39c2511902f5b1a 273 Gene3D G3DSA:3.20.80.10 189 270 6.3E-11 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amet_4423 2a1e67e069353b7fc39c2511902f5b1a 273 SUPERFAMILY SSF46955 5 109 4.4E-25 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_4423 2a1e67e069353b7fc39c2511902f5b1a 273 Pfam PF06445 GyrI-like small molecule binding domain 181 269 1.4E-8 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain Amet_4423 2a1e67e069353b7fc39c2511902f5b1a 273 Gene3D G3DSA:1.10.1660.10 3 131 5.8E-30 T 12-10-2018 Amet_4423 2a1e67e069353b7fc39c2511902f5b1a 273 SUPERFAMILY SSF55136 142 268 3.66E-20 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Amet_4423 2a1e67e069353b7fc39c2511902f5b1a 273 Pfam PF13411 MerR HTH family regulatory protein 7 73 1.3E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_1142 02dd95757cd9808e04d930bc3f9b9020 176 PIRSF PIRSF019239 15 176 5.8E-48 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Amet_1142 02dd95757cd9808e04d930bc3f9b9020 176 Pfam PF01899 Na+/H+ ion antiporter subunit 26 173 1.9E-31 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Amet_0616 3cdcd3f0d4e99c964155f3702ff0e8c8 443 PIRSF PIRSF006603 3 443 1.1E-49 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_0616 3cdcd3f0d4e99c964155f3702ff0e8c8 443 Pfam PF01554 MatE 20 180 1.6E-27 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_0616 3cdcd3f0d4e99c964155f3702ff0e8c8 443 Pfam PF01554 MatE 243 398 2.4E-13 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_0616 3cdcd3f0d4e99c964155f3702ff0e8c8 443 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 405 4.0E-44 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_2332 79c444b76948380a7505e12b58305b24 248 Pfam PF01416 tRNA pseudouridine synthase 149 248 9.6E-17 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2332 79c444b76948380a7505e12b58305b24 248 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 243 4.9E-46 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2332 79c444b76948380a7505e12b58305b24 248 SUPERFAMILY SSF55120 1 248 1.87E-54 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2332 79c444b76948380a7505e12b58305b24 248 Gene3D G3DSA:3.30.70.580 1 107 1.1E-22 T 12-10-2018 Amet_2332 79c444b76948380a7505e12b58305b24 248 PIRSF PIRSF001430 1 248 4.1E-55 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_2332 79c444b76948380a7505e12b58305b24 248 Gene3D G3DSA:3.30.70.660 110 247 9.9E-32 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Amet_2332 79c444b76948380a7505e12b58305b24 248 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 248 27.417 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Amet_0292 75b74154126eea513ca1b6b2f8488b14 126 Gene3D G3DSA:3.30.2010.20 6 126 3.7E-37 T 12-10-2018 IPR038555 Zincin-like metallopeptidase superfamily Amet_0292 75b74154126eea513ca1b6b2f8488b14 126 SUPERFAMILY SSF55486 6 107 8.55E-17 T 12-10-2018 Amet_0292 75b74154126eea513ca1b6b2f8488b14 126 Pfam PF06262 Zincin-like metallopeptidase 60 101 1.3E-5 T 12-10-2018 IPR010428 Zincin-like metallopeptidase Amet_1509 2e0eb2e8381a3eadad6dafc7eb94d73c 174 SUPERFAMILY SSF143555 3 137 2.22E-48 T 12-10-2018 Amet_1509 2e0eb2e8381a3eadad6dafc7eb94d73c 174 PIRSF PIRSF006578 105 173 4.6E-18 T 12-10-2018 IPR026328 Formylmethanofuran dehydrogenase, subunit E Amet_1509 2e0eb2e8381a3eadad6dafc7eb94d73c 174 PIRSF PIRSF006578 1 110 1.7E-47 T 12-10-2018 IPR026328 Formylmethanofuran dehydrogenase, subunit E Amet_1509 2e0eb2e8381a3eadad6dafc7eb94d73c 174 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 136 172 1.2E-10 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Amet_1509 2e0eb2e8381a3eadad6dafc7eb94d73c 174 Gene3D G3DSA:3.30.1330.130 1 131 1.4E-41 T 12-10-2018 Amet_1509 2e0eb2e8381a3eadad6dafc7eb94d73c 174 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 12 118 1.1E-31 T 12-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain Amet_3756 f07cf59d26c65b88f0a30cefcc83b170 402 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 36 394 3.3E-92 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 Amet_3756 f07cf59d26c65b88f0a30cefcc83b170 402 Pfam PF01636 Phosphotransferase enzyme family 223 268 7.9E-9 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase Amet_3756 f07cf59d26c65b88f0a30cefcc83b170 402 Gene3D G3DSA:3.90.1200.10 118 400 2.1E-92 T 12-10-2018 Amet_3756 f07cf59d26c65b88f0a30cefcc83b170 402 Gene3D G3DSA:3.30.200.20 1 115 3.2E-35 T 12-10-2018 Amet_3756 f07cf59d26c65b88f0a30cefcc83b170 402 PIRSF PIRSF031134 2 402 6.6E-150 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 Amet_3756 f07cf59d26c65b88f0a30cefcc83b170 402 SUPERFAMILY SSF56112 9 397 7.92E-79 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Amet_3756 f07cf59d26c65b88f0a30cefcc83b170 402 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 402 166.255 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 Amet_0297 17dce24cef19c8aebde1b340987e7230 237 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 16 57 4.1E-9 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain Amet_0297 17dce24cef19c8aebde1b340987e7230 237 Gene3D G3DSA:3.30.1330.60 86 237 1.7E-46 T 12-10-2018 IPR036737 OmpA-like domain superfamily Amet_0297 17dce24cef19c8aebde1b340987e7230 237 Pfam PF00691 OmpA family 130 229 9.9E-21 T 12-10-2018 IPR006665 OmpA-like domain Amet_0297 17dce24cef19c8aebde1b340987e7230 237 SUPERFAMILY SSF103088 119 235 1.57E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily Amet_0008 59dfa27effc0c998e2e5817a77e1d0a6 105 SUPERFAMILY SSF52091 10 103 3.73E-23 T 12-10-2018 IPR036513 STAS domain superfamily Amet_0008 59dfa27effc0c998e2e5817a77e1d0a6 105 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 6 103 2.2E-24 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Amet_0008 59dfa27effc0c998e2e5817a77e1d0a6 105 Gene3D G3DSA:3.30.750.24 8 105 4.0E-24 T 12-10-2018 IPR036513 STAS domain superfamily Amet_0008 59dfa27effc0c998e2e5817a77e1d0a6 105 Pfam PF01740 STAS domain 7 101 5.1E-16 T 12-10-2018 IPR002645 STAS domain Amet_3759 1c5b832046823d066b260cd4943f0f06 344 SUPERFAMILY SSF58104 154 341 2.49E-37 T 12-10-2018 Amet_3759 1c5b832046823d066b260cd4943f0f06 344 Pfam PF10114 Sensory domain found in PocR 17 176 2.1E-53 T 12-10-2018 IPR018771 PocR domain Amet_3759 1c5b832046823d066b260cd4943f0f06 344 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 217 338 7.4E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3759 1c5b832046823d066b260cd4943f0f06 344 Gene3D G3DSA:1.10.287.950 119 344 1.0E-35 T 12-10-2018 Amet_3759 1c5b832046823d066b260cd4943f0f06 344 SMART SM00283 158 341 9.1E-4 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 309 3.6E-114 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 Gene3D G3DSA:3.50.50.60 7 308 6.5E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 3.3E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 3.3E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 3.3E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 3.3E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 3.3E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 3.3E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 3.3E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 3.3E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 3.3E-72 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 7.4E-36 T 12-10-2018 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 7.4E-36 T 12-10-2018 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 7.4E-36 T 12-10-2018 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 7.4E-36 T 12-10-2018 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 7.4E-36 T 12-10-2018 Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 SUPERFAMILY SSF51905 2 309 3.46E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 Gene3D G3DSA:3.50.50.60 121 249 6.5E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3595 2b1f2b6112f2dd9be60f14055e34c36e 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 298 4.6E-52 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Amet_1447 a20f2c1e05eab9ce4a642430e7d072a7 149 Gene3D G3DSA:3.40.50.620 1 149 1.7E-37 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_1447 a20f2c1e05eab9ce4a642430e7d072a7 149 SUPERFAMILY SSF52402 1 149 4.77E-32 T 12-10-2018 Amet_1447 a20f2c1e05eab9ce4a642430e7d072a7 149 Pfam PF00582 Universal stress protein family 2 149 1.3E-28 T 12-10-2018 IPR006016 UspA Amet_1447 a20f2c1e05eab9ce4a642430e7d072a7 149 PRINTS PR01438 Universal stress protein signature 127 149 3.3E-9 T 12-10-2018 IPR006015 Universal stress protein A Amet_1447 a20f2c1e05eab9ce4a642430e7d072a7 149 PRINTS PR01438 Universal stress protein signature 109 121 3.3E-9 T 12-10-2018 IPR006015 Universal stress protein A Amet_3805 ccece2816ac5d6a167953999679daf76 572 SUPERFAMILY SSF55874 419 553 2.88E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3805 ccece2816ac5d6a167953999679daf76 572 Pfam PF16927 N-terminal 7TM region of histidine kinase 12 234 2.9E-44 T 12-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region Amet_3805 ccece2816ac5d6a167953999679daf76 572 Gene3D G3DSA:3.30.565.10 420 559 8.0E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3805 ccece2816ac5d6a167953999679daf76 572 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 458 554 6.7E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3805 ccece2816ac5d6a167953999679daf76 572 Pfam PF06580 Histidine kinase 362 441 2.4E-23 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Amet_2585 33f7a88558c4d9d562dbb14fe60bdb9f 138 Hamap MF_00984 Single-stranded DNA-binding protein. 1 114 29.663 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Amet_2585 33f7a88558c4d9d562dbb14fe60bdb9f 138 SUPERFAMILY SSF50249 1 138 1.2E-36 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_2585 33f7a88558c4d9d562dbb14fe60bdb9f 138 PIRSF PIRSF002070 1 135 9.0E-33 T 12-10-2018 Amet_2585 33f7a88558c4d9d562dbb14fe60bdb9f 138 Pfam PF00436 Single-strand binding protein family 1 110 3.5E-31 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Amet_2585 33f7a88558c4d9d562dbb14fe60bdb9f 138 Gene3D G3DSA:2.40.50.140 1 120 1.2E-36 T 12-10-2018 Amet_2585 33f7a88558c4d9d562dbb14fe60bdb9f 138 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 123 1.7E-31 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Amet_2872 89e3503c8e17289c89e9e0254d1c9579 296 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 2 295 1.8E-78 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 Amet_2872 89e3503c8e17289c89e9e0254d1c9579 296 Pfam PF03419 Sporulation factor SpoIIGA 3 295 5.0E-89 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 Amet_2872 89e3503c8e17289c89e9e0254d1c9579 296 PIRSF PIRSF018571 1 296 7.5E-113 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 Amet_4650 338a2ff5f5efe6cc766ae5552522d59f 166 SUPERFAMILY SSF103642 144 165 2.29E-8 T 12-10-2018 Amet_4650 338a2ff5f5efe6cc766ae5552522d59f 166 Pfam PF02810 SEC-C motif 147 164 1.7E-10 T 12-10-2018 IPR004027 SEC-C motif Amet_4650 338a2ff5f5efe6cc766ae5552522d59f 166 Gene3D G3DSA:3.10.450.50 78 165 4.9E-12 T 12-10-2018 Amet_2459 94ff2503d1a936dbfe6e224776e43fae 85 Hamap MF_01507 UPF0297 protein . 2 85 26.063 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 Amet_2459 94ff2503d1a936dbfe6e224776e43fae 85 PIRSF PIRSF037258 2 85 1.0E-38 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 Amet_2459 94ff2503d1a936dbfe6e224776e43fae 85 Pfam PF06135 Bacterial protein of unknown function (DUF965) 8 82 3.7E-37 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 Amet_1621 26ce2c43789429b2848db0ac9b0b8047 179 Pfam PF00156 Phosphoribosyl transferase domain 15 161 1.4E-26 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amet_1621 26ce2c43789429b2848db0ac9b0b8047 179 SUPERFAMILY SSF53271 2 176 1.06E-51 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_1621 26ce2c43789429b2848db0ac9b0b8047 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 10 174 5.8E-61 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Amet_1621 26ce2c43789429b2848db0ac9b0b8047 179 Gene3D G3DSA:3.40.50.2020 1 179 5.8E-64 T 12-10-2018 Amet_1060 2ec3d14fe0778a45d5d39eb38baa50d0 258 Pfam PF00196 Bacterial regulatory proteins, luxR family 194 248 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1060 2ec3d14fe0778a45d5d39eb38baa50d0 258 Gene3D G3DSA:3.30.450.40 1 173 9.6E-31 T 12-10-2018 IPR029016 GAF-like domain superfamily Amet_1060 2ec3d14fe0778a45d5d39eb38baa50d0 258 Gene3D G3DSA:1.10.10.10 174 258 1.8E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1060 2ec3d14fe0778a45d5d39eb38baa50d0 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 225 1.1E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1060 2ec3d14fe0778a45d5d39eb38baa50d0 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 225 237 1.1E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1060 2ec3d14fe0778a45d5d39eb38baa50d0 258 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 209 1.1E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1060 2ec3d14fe0778a45d5d39eb38baa50d0 258 SUPERFAMILY SSF46894 189 255 3.4E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_1060 2ec3d14fe0778a45d5d39eb38baa50d0 258 SMART SM00421 192 249 7.1E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_2304 085d5905ab56d546af9e4754845e4bd3 110 Pfam PF04327 Cysteine protease Prp 1 103 1.3E-27 T 12-10-2018 IPR007422 Cysteine protease Prp Amet_2304 085d5905ab56d546af9e4754845e4bd3 110 SUPERFAMILY SSF118010 1 109 1.7E-32 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily Amet_2304 085d5905ab56d546af9e4754845e4bd3 110 Gene3D G3DSA:3.30.70.1490 1 109 1.0E-33 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily Amet_2181 067986bd279b93224aa358336ea4a308 246 Pfam PF04607 Region found in RelA / SpoT proteins 59 180 1.3E-36 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Amet_2181 067986bd279b93224aa358336ea4a308 246 Gene3D G3DSA:1.10.287.860 165 227 1.2E-21 T 12-10-2018 Amet_2181 067986bd279b93224aa358336ea4a308 246 SMART SM00954 59 182 1.3E-46 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 Amet_2181 067986bd279b93224aa358336ea4a308 246 Gene3D G3DSA:3.30.460.10 14 163 5.3E-51 T 12-10-2018 Amet_2181 067986bd279b93224aa358336ea4a308 246 SUPERFAMILY SSF81301 19 211 4.74E-57 T 12-10-2018 Amet_2960 586b8d5ad42ca729f8c0f0aed57ef775 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 307 487 2.7E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2960 586b8d5ad42ca729f8c0f0aed57ef775 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 7.9E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_2960 586b8d5ad42ca729f8c0f0aed57ef775 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 358 385 7.9E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_2960 586b8d5ad42ca729f8c0f0aed57ef775 536 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 416 7.9E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Amet_2960 586b8d5ad42ca729f8c0f0aed57ef775 536 Gene3D G3DSA:3.30.450.20 109 203 7.2E-15 T 12-10-2018 Amet_2960 586b8d5ad42ca729f8c0f0aed57ef775 536 SUPERFAMILY SSF103190 109 205 2.55E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Amet_2960 586b8d5ad42ca729f8c0f0aed57ef775 536 Gene3D G3DSA:1.10.287.950 229 535 2.1E-65 T 12-10-2018 Amet_2960 586b8d5ad42ca729f8c0f0aed57ef775 536 SMART SM00283 260 535 6.4E-64 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Amet_2960 586b8d5ad42ca729f8c0f0aed57ef775 536 SUPERFAMILY SSF58104 267 534 1.96E-60 T 12-10-2018 Amet_2875 dbda2a8e9fe6ba4f94b21fecb2d5b0b2 240 Gene3D G3DSA:3.30.70.1880 87 240 1.8E-36 T 12-10-2018 Amet_2875 dbda2a8e9fe6ba4f94b21fecb2d5b0b2 240 Pfam PF05949 Bacterial protein of unknown function (DUF881) 89 234 1.5E-36 T 12-10-2018 IPR010273 Protein of unknown function DUF881 Amet_2634 cd8b53343f688ce192eea768945bd3cf 378 SUPERFAMILY SSF52518 5 259 3.04E-71 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_2634 cd8b53343f688ce192eea768945bd3cf 378 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 276 370 8.3E-21 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Amet_2634 cd8b53343f688ce192eea768945bd3cf 378 SUPERFAMILY SSF52922 267 377 4.32E-22 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_2634 cd8b53343f688ce192eea768945bd3cf 378 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 243 9.1E-70 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amet_2634 cd8b53343f688ce192eea768945bd3cf 378 Gene3D G3DSA:3.40.50.920 263 378 1.2E-22 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_2634 cd8b53343f688ce192eea768945bd3cf 378 Gene3D G3DSA:3.40.50.970 2 194 8.8E-76 T 12-10-2018 Amet_4095 81b34ab4b31d8c0ad99c68529ec4ee90 136 Gene3D G3DSA:2.40.33.20 17 136 6.0E-7 T 12-10-2018 Amet_4095 81b34ab4b31d8c0ad99c68529ec4ee90 136 SUPERFAMILY SSF50800 29 133 8.37E-9 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Amet_3475 4ff23c31bf2ff5eb23323d28ce5800a6 257 Pfam PF01478 Type IV leader peptidase family 105 212 9.2E-18 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Amet_3475 4ff23c31bf2ff5eb23323d28ce5800a6 257 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 11 93 1.0E-33 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal Amet_3475 4ff23c31bf2ff5eb23323d28ce5800a6 257 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 170 180 2.1E-10 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Amet_3475 4ff23c31bf2ff5eb23323d28ce5800a6 257 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 113 130 2.1E-10 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Amet_3475 4ff23c31bf2ff5eb23323d28ce5800a6 257 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 193 208 2.1E-10 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Amet_3475 4ff23c31bf2ff5eb23323d28ce5800a6 257 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 181 192 2.1E-10 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 TIGRFAM TIGR00191 thrB: homoserine kinase 3 297 3.3E-76 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 Gene3D G3DSA:3.30.230.10 4 157 1.1E-85 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 Hamap MF_00384 Homoserine kinase [thrB]. 4 297 29.498 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 Pfam PF00288 GHMP kinases N terminal domain 79 139 1.1E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 SUPERFAMILY SSF55060 161 263 7.19E-23 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 PRINTS PR00958 Homoserine kinase signature 244 259 1.7E-36 T 12-10-2018 Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 PRINTS PR00958 Homoserine kinase signature 126 139 1.7E-36 T 12-10-2018 Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 PRINTS PR00958 Homoserine kinase signature 9 24 1.7E-36 T 12-10-2018 Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 PRINTS PR00958 Homoserine kinase signature 165 182 1.7E-36 T 12-10-2018 Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 PRINTS PR00958 Homoserine kinase signature 92 107 1.7E-36 T 12-10-2018 Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 Gene3D G3DSA:3.30.70.890 158 261 1.1E-85 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 PIRSF PIRSF000676 1 298 5.8E-85 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 SUPERFAMILY SSF54211 1 151 7.29E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_0568 389e66fa773bbd8314e8981ae3371a57 298 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 85 96 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Amet_4659 2a7ea281e882b8bba718fce1460627e5 272 SUPERFAMILY SSF158430 132 265 2.22E-40 T 12-10-2018 Amet_4659 2a7ea281e882b8bba718fce1460627e5 272 Gene3D G3DSA:1.20.1260.120 6 272 3.9E-94 T 12-10-2018 Amet_4659 2a7ea281e882b8bba718fce1460627e5 272 SUPERFAMILY SSF158430 9 129 3.4E-35 T 12-10-2018 Amet_4659 2a7ea281e882b8bba718fce1460627e5 272 Pfam PF11155 Domain of unknown function (DUF2935) 13 122 2.3E-25 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 Amet_4659 2a7ea281e882b8bba718fce1460627e5 272 Pfam PF11155 Domain of unknown function (DUF2935) 134 252 1.1E-25 T 12-10-2018 IPR021328 Protein of unknown function DUF2935 Amet_3151 c7a2a145a821465305211566b45ce2d2 151 Pfam PF01047 MarR family 37 95 1.5E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_3151 c7a2a145a821465305211566b45ce2d2 151 SMART SM00347 30 130 3.1E-21 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_3151 c7a2a145a821465305211566b45ce2d2 151 Gene3D G3DSA:1.10.10.10 1 144 2.5E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3151 c7a2a145a821465305211566b45ce2d2 151 SUPERFAMILY SSF46785 3 141 1.17E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0102 ba6d35836ba07c651e085d72640c8445 420 Pfam PF14501 GHKL domain 315 416 3.6E-14 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Amet_0102 ba6d35836ba07c651e085d72640c8445 420 SUPERFAMILY SSF55874 280 408 5.86E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0102 ba6d35836ba07c651e085d72640c8445 420 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 221 277 7.5E-8 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain Amet_0102 ba6d35836ba07c651e085d72640c8445 420 SMART SM00387 313 420 1.4E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0102 ba6d35836ba07c651e085d72640c8445 420 Gene3D G3DSA:3.30.565.10 267 420 1.3E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3443 f658ad2d66bb89336921c2a7b836a270 333 SUPERFAMILY SSF53756 15 322 9.42E-11 T 12-10-2018 Amet_3443 f658ad2d66bb89336921c2a7b836a270 333 Gene3D G3DSA:3.40.50.2000 172 309 1.6E-7 T 12-10-2018 Amet_3443 f658ad2d66bb89336921c2a7b836a270 333 Pfam PF13524 Glycosyl transferases group 1 228 318 3.6E-22 T 12-10-2018 Amet_0094 5f88876152ea123909a4f34277727eb5 482 SUPERFAMILY SSF51690 135 475 3.83E-132 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Amet_0094 5f88876152ea123909a4f34277727eb5 482 Gene3D G3DSA:3.20.20.70 147 316 3.3E-209 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0094 5f88876152ea123909a4f34277727eb5 482 PIRSF PIRSF000484 1 477 1.6E-161 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Amet_0094 5f88876152ea123909a4f34277727eb5 482 Gene3D G3DSA:3.20.140.10 6 467 3.3E-209 T 12-10-2018 Amet_0094 5f88876152ea123909a4f34277727eb5 482 SUPERFAMILY SSF54675 3 134 1.85E-48 T 12-10-2018 Amet_0094 5f88876152ea123909a4f34277727eb5 482 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 153 353 2.0E-9 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Amet_0094 5f88876152ea123909a4f34277727eb5 482 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 463 1.2E-181 T 12-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 Amet_4510 242f653cb0489c2757cd427328d69bee 358 Gene3D G3DSA:1.20.1260.110 144 290 7.2E-46 T 12-10-2018 IPR038331 DisA, linker domain superfamily Amet_4510 242f653cb0489c2757cd427328d69bee 358 Gene3D G3DSA:3.40.1700.10 7 143 3.9E-54 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Amet_4510 242f653cb0489c2757cd427328d69bee 358 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 5 355 44.276 T 12-10-2018 IPR023763 DNA integrity scanning protein, DisA Amet_4510 242f653cb0489c2757cd427328d69bee 358 SUPERFAMILY SSF143597 16 143 3.14E-30 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Amet_4510 242f653cb0489c2757cd427328d69bee 358 Pfam PF12826 Helix-hairpin-helix motif 307 346 1.8E-6 T 12-10-2018 Amet_4510 242f653cb0489c2757cd427328d69bee 358 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 26 137 2.0E-26 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Amet_4510 242f653cb0489c2757cd427328d69bee 358 SUPERFAMILY SSF47781 275 352 1.78E-13 T 12-10-2018 IPR010994 RuvA domain 2-like Amet_4510 242f653cb0489c2757cd427328d69bee 358 Pfam PF10635 DisA bacterial checkpoint controller linker region 144 281 2.0E-53 T 12-10-2018 IPR018906 DNA integrity scanning, DisA, linker region Amet_4510 242f653cb0489c2757cd427328d69bee 358 Gene3D G3DSA:1.10.150.20 291 353 2.8E-26 T 12-10-2018 Amet_2422 ca98016b80c3fc9da07783dee2a68f44 135 Gene3D G3DSA:3.30.2220.30 56 124 6.9E-9 T 12-10-2018 IPR038559 Clostridium phage phiCD119, XkdN superfamily Amet_2422 ca98016b80c3fc9da07783dee2a68f44 135 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 60 134 6.8E-12 T 12-10-2018 IPR014986 Clostridium phage phiCD119, XkdN Amet_3450 2fc6b98d4480faabcf6da26840286859 231 SUPERFAMILY SSF53448 1 144 1.41E-17 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_3450 2fc6b98d4480faabcf6da26840286859 231 Pfam PF13704 Glycosyl transferase family 2 12 106 2.1E-13 T 12-10-2018 Amet_3450 2fc6b98d4480faabcf6da26840286859 231 Gene3D G3DSA:3.90.550.10 1 188 1.7E-13 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_2311 216f543a7dcaad06572dff266e43f448 387 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 62 211 5.1E-43 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amet_2311 216f543a7dcaad06572dff266e43f448 387 Gene3D G3DSA:1.10.260.150 32 300 3.3E-79 T 12-10-2018 Amet_2311 216f543a7dcaad06572dff266e43f448 387 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 62 211 2.1E-43 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amet_2311 216f543a7dcaad06572dff266e43f448 387 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 299 384 2.6E-12 T 12-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain Amet_2311 216f543a7dcaad06572dff266e43f448 387 Gene3D G3DSA:3.30.70.2390 301 382 7.7E-9 T 12-10-2018 Amet_1724 789033819d512f652e134176c5424a2f 161 Pfam PF00583 Acetyltransferase (GNAT) family 39 127 6.7E-12 T 12-10-2018 IPR000182 GNAT domain Amet_1724 789033819d512f652e134176c5424a2f 161 SUPERFAMILY SSF55729 1 159 9.59E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1724 789033819d512f652e134176c5424a2f 161 Gene3D G3DSA:3.40.630.30 1 160 3.3E-24 T 12-10-2018 Amet_4326 1627ac9ee74984d94ccb5b665a599cfc 76 SUPERFAMILY SSF52833 4 75 1.08E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_4326 1627ac9ee74984d94ccb5b665a599cfc 76 Pfam PF00462 Glutaredoxin 5 63 8.2E-19 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Amet_4326 1627ac9ee74984d94ccb5b665a599cfc 76 TIGRFAM TIGR02196 GlrX_YruB: glutaredoxin-like protein, YruB-family 5 76 4.3E-26 T 12-10-2018 IPR011911 Glutaredoxin-like protein, YruB Amet_4326 1627ac9ee74984d94ccb5b665a599cfc 76 Gene3D G3DSA:3.40.30.10 4 76 3.2E-26 T 12-10-2018 Amet_0216 dc797d76bf06f37bb76c684484515567 278 Pfam PF01797 Transposase IS200 like 14 123 3.2E-13 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_0216 dc797d76bf06f37bb76c684484515567 278 SMART SM01321 9 123 5.7E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_0216 dc797d76bf06f37bb76c684484515567 278 SUPERFAMILY SSF143422 3 129 1.7E-21 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0216 dc797d76bf06f37bb76c684484515567 278 Gene3D G3DSA:3.30.70.1290 1 159 8.9E-38 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0593 b7eaa44dbc05b845830800bcfd3dc076 218 Gene3D G3DSA:3.40.109.10 33 218 4.5E-46 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_0593 b7eaa44dbc05b845830800bcfd3dc076 218 SUPERFAMILY SSF55469 35 218 3.59E-41 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_0593 b7eaa44dbc05b845830800bcfd3dc076 218 Pfam PF00881 Nitroreductase family 42 93 4.9E-14 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amet_0593 b7eaa44dbc05b845830800bcfd3dc076 218 Pfam PF00881 Nitroreductase family 99 197 5.2E-7 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amet_3750 7085786d103461272569da8c088e5fbf 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 7.3E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3750 7085786d103461272569da8c088e5fbf 234 SUPERFAMILY SSF48008 97 230 7.85E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_3750 7085786d103461272569da8c088e5fbf 234 SMART SM00895 98 224 7.3E-16 T 12-10-2018 IPR011711 GntR, C-terminal Amet_3750 7085786d103461272569da8c088e5fbf 234 Pfam PF07729 FCD domain 98 223 1.1E-21 T 12-10-2018 IPR011711 GntR, C-terminal Amet_3750 7085786d103461272569da8c088e5fbf 234 SUPERFAMILY SSF46785 1 77 6.28E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3750 7085786d103461272569da8c088e5fbf 234 Gene3D G3DSA:1.10.10.10 1 73 5.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3750 7085786d103461272569da8c088e5fbf 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3750 7085786d103461272569da8c088e5fbf 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3750 7085786d103461272569da8c088e5fbf 234 SMART SM00345 14 73 4.4E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3750 7085786d103461272569da8c088e5fbf 234 Gene3D G3DSA:1.20.120.530 79 231 2.3E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Amet_4552 ca918593e6655b5aefb65d85f55eec8b 414 Pfam PF04055 Radical SAM superfamily 122 269 5.0E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_4552 ca918593e6655b5aefb65d85f55eec8b 414 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 13 413 1.1E-192 T 12-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 Amet_4552 ca918593e6655b5aefb65d85f55eec8b 414 TIGRFAM TIGR00238 TIGR00238: KamA family protein 5 334 1.1E-122 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Amet_4552 ca918593e6655b5aefb65d85f55eec8b 414 PIRSF PIRSF004911 1 395 1.9E-168 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Amet_4552 ca918593e6655b5aefb65d85f55eec8b 414 SUPERFAMILY SSF102114 106 348 7.72E-36 T 12-10-2018 Amet_4552 ca918593e6655b5aefb65d85f55eec8b 414 Gene3D G3DSA:3.20.20.70 55 340 2.3E-122 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_4552 ca918593e6655b5aefb65d85f55eec8b 414 Pfam PF12544 Lysine-2,3-aminomutase 313 413 1.6E-40 T 12-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain Amet_4552 ca918593e6655b5aefb65d85f55eec8b 414 Gene3D G3DSA:2.40.50.600 341 402 3.0E-27 T 12-10-2018 Amet_2575 9de8a0c1121145a463e46f85c4098657 136 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 20 125 1.2E-6 T 12-10-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 Amet_1979 f53cf354f5d6238462be1849804bd89b 201 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 38 192 3.4E-17 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain Amet_1979 f53cf354f5d6238462be1849804bd89b 201 Gene3D G3DSA:3.40.50.1110 19 201 1.8E-31 T 12-10-2018 IPR036514 SGNH hydrolase superfamily Amet_1979 f53cf354f5d6238462be1849804bd89b 201 SUPERFAMILY SSF52266 35 199 4.5E-30 T 12-10-2018 Amet_1118 860fc960d761f3ea0847e3dee422f6c0 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 285 3.2E-31 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1118 860fc960d761f3ea0847e3dee422f6c0 297 Gene3D G3DSA:1.10.3720.10 77 282 2.5E-17 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1118 860fc960d761f3ea0847e3dee422f6c0 297 SUPERFAMILY SSF161098 81 268 4.19E-23 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1352 dec35feab423ffe5e2f35fcd863774ce 425 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 61 324 1.9E-76 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA Amet_1352 dec35feab423ffe5e2f35fcd863774ce 425 SUPERFAMILY SSF56300 59 343 1.48E-42 T 12-10-2018 Amet_1352 dec35feab423ffe5e2f35fcd863774ce 425 SMART SM00854 60 324 2.0E-91 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA Amet_1352 dec35feab423ffe5e2f35fcd863774ce 425 Gene3D G3DSA:3.60.21.10 56 359 6.0E-11 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_0606 007439081ea40c442cd5aa12237e9d95 155 SUPERFAMILY SSF54292 1 77 7.21E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Amet_0606 007439081ea40c442cd5aa12237e9d95 155 SUPERFAMILY SSF47741 72 147 1.3E-22 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Amet_0606 007439081ea40c442cd5aa12237e9d95 155 Gene3D G3DSA:1.10.150.120 76 153 3.4E-19 T 12-10-2018 Amet_0606 007439081ea40c442cd5aa12237e9d95 155 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 58 1.8E-8 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Amet_0606 007439081ea40c442cd5aa12237e9d95 155 Gene3D G3DSA:3.10.20.30 1 75 3.0E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_0606 007439081ea40c442cd5aa12237e9d95 155 Pfam PF01799 [2Fe-2S] binding domain 72 143 4.9E-20 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Amet_0606 007439081ea40c442cd5aa12237e9d95 155 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Amet_1513 a39ab9e55e8b0e733c0b8a1463f0294d 339 Gene3D G3DSA:1.10.3720.10 104 336 1.3E-24 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1513 a39ab9e55e8b0e733c0b8a1463f0294d 339 SUPERFAMILY SSF161098 111 326 3.14E-21 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1513 a39ab9e55e8b0e733c0b8a1463f0294d 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 338 1.3E-44 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_0585 4208f2bb938bb57330f9dbad8f0d4f8a 251 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Amet_0585 4208f2bb938bb57330f9dbad8f0d4f8a 251 Gene3D G3DSA:3.60.10.10 1 250 2.6E-97 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amet_0585 4208f2bb938bb57330f9dbad8f0d4f8a 251 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 250 9.0E-102 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Amet_0585 4208f2bb938bb57330f9dbad8f0d4f8a 251 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 249 1.3E-98 T 12-10-2018 Amet_0585 4208f2bb938bb57330f9dbad8f0d4f8a 251 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 242 6.5E-20 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Amet_0585 4208f2bb938bb57330f9dbad8f0d4f8a 251 SUPERFAMILY SSF56219 1 251 2.88E-80 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Amet_0585 4208f2bb938bb57330f9dbad8f0d4f8a 251 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 210 221 - T 12-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 Amet_4157 48acdb6abd1fe47b079bd1c5d98d9eb4 97 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 10 96 6.8E-26 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Amet_4157 48acdb6abd1fe47b079bd1c5d98d9eb4 97 Pfam PF03334 Na+/H+ antiporter subunit 10 89 3.5E-29 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Amet_1075 f6139e978d34a0d09f2ee24fce1b8a47 286 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 11 284 1.9E-78 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Amet_1075 f6139e978d34a0d09f2ee24fce1b8a47 286 SUPERFAMILY SSF53223 4 108 1.96E-37 T 12-10-2018 Amet_1075 f6139e978d34a0d09f2ee24fce1b8a47 286 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 9 285 36.19 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Amet_1075 f6139e978d34a0d09f2ee24fce1b8a47 286 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 125 204 2.0E-9 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Amet_1075 f6139e978d34a0d09f2ee24fce1b8a47 286 Gene3D G3DSA:3.40.50.720 110 257 2.0E-96 T 12-10-2018 Amet_1075 f6139e978d34a0d09f2ee24fce1b8a47 286 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 96 1.1E-31 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Amet_1075 f6139e978d34a0d09f2ee24fce1b8a47 286 SUPERFAMILY SSF51735 109 284 1.67E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1075 f6139e978d34a0d09f2ee24fce1b8a47 286 Gene3D G3DSA:3.40.50.10860 13 273 2.0E-96 T 12-10-2018 Amet_3913 21eb9cd3d29f88318db582558629bbec 282 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 5 224 4.1E-51 T 12-10-2018 IPR005181 Sialate O-acetylesterase domain Amet_3913 21eb9cd3d29f88318db582558629bbec 282 Gene3D G3DSA:1.10.1200.110 249 282 1.1E-18 T 12-10-2018 Amet_3913 21eb9cd3d29f88318db582558629bbec 282 Gene3D G3DSA:3.40.50.1110 1 248 3.0E-89 T 12-10-2018 IPR036514 SGNH hydrolase superfamily Amet_3913 21eb9cd3d29f88318db582558629bbec 282 SUPERFAMILY SSF52266 2 271 6.96E-78 T 12-10-2018 Amet_3695 9628c1f2b39dd1e535a2a856f441d5bd 167 Pfam PF12682 Flavodoxin 6 118 9.1E-10 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Amet_3695 9628c1f2b39dd1e535a2a856f441d5bd 167 SUPERFAMILY SSF52218 5 161 2.1E-22 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_3695 9628c1f2b39dd1e535a2a856f441d5bd 167 Gene3D G3DSA:3.40.50.360 1 164 1.9E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_2219 6bcecf2733ecac227d53b8e815893ef9 151 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 28 145 2.5E-39 T 12-10-2018 IPR005562 SpoVA Amet_2219 6bcecf2733ecac227d53b8e815893ef9 151 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 10 150 4.0E-58 T 12-10-2018 IPR014203 Sporulation stage V, protein AC Amet_4465 0fa688be51c8c8dd06f009b3b5b82770 61 Gene3D G3DSA:4.10.830.10 1 61 1.4E-28 T 12-10-2018 Amet_4465 0fa688be51c8c8dd06f009b3b5b82770 61 SUPERFAMILY SSF57716 3 61 4.92E-22 T 12-10-2018 Amet_4465 0fa688be51c8c8dd06f009b3b5b82770 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.965 T 12-10-2018 IPR023053 Ribosomal protein S14, type Z Amet_4465 0fa688be51c8c8dd06f009b3b5b82770 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4465 0fa688be51c8c8dd06f009b3b5b82770 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 2.2E-25 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_0232 72280f65d4ff3cdac1598ef3fd4a59fd 283 Gene3D G3DSA:3.10.290.30 37 254 4.4E-45 T 12-10-2018 IPR024047 MM3350-like superfamily Amet_0232 72280f65d4ff3cdac1598ef3fd4a59fd 283 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 42 252 5.4E-49 T 12-10-2018 IPR012912 Plasmid pRiA4b, Orf3 Amet_0232 72280f65d4ff3cdac1598ef3fd4a59fd 283 SUPERFAMILY SSF159941 41 252 6.28E-43 T 12-10-2018 IPR024047 MM3350-like superfamily Amet_3231 503315dcce10aeadbe369a3d794eba38 47 Gene3D G3DSA:3.50.50.60 1 47 6.6E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3653 b4aee6b1e1d32cca557038e52e46c68c 190 SUPERFAMILY SSF47240 1 188 8.52E-72 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_3653 b4aee6b1e1d32cca557038e52e46c68c 190 Pfam PF05067 Manganese containing catalase 1 184 1.2E-63 T 12-10-2018 IPR007760 Manganese catalase Amet_3653 b4aee6b1e1d32cca557038e52e46c68c 190 Gene3D G3DSA:1.20.1260.10 1 188 3.8E-65 T 12-10-2018 IPR012347 Ferritin-like Amet_2437 80bea866eb6783a69682259190a600fa 147 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 16 144 3.6E-25 T 12-10-2018 IPR006480 Bacteriophage holin family Amet_2437 80bea866eb6783a69682259190a600fa 147 Pfam PF05105 Bacteriophage holin family 20 138 8.8E-34 T 12-10-2018 IPR006480 Bacteriophage holin family Amet_0223 957be22649452634336239f171adfe69 82 Gene3D G3DSA:1.10.260.150 1 82 6.1E-8 T 12-10-2018 Amet_0372 359bde7a580a23c3832f386c1bc2197a 147 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 142 32.533 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Amet_0372 359bde7a580a23c3832f386c1bc2197a 147 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 6 139 6.4E-54 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Amet_0372 359bde7a580a23c3832f386c1bc2197a 147 Gene3D G3DSA:3.10.129.10 1 141 8.7E-58 T 12-10-2018 Amet_0372 359bde7a580a23c3832f386c1bc2197a 147 SUPERFAMILY SSF54637 7 144 3.65E-47 T 12-10-2018 IPR029069 HotDog domain superfamily Amet_0372 359bde7a580a23c3832f386c1bc2197a 147 Pfam PF07977 FabA-like domain 12 134 5.3E-34 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Amet_0922 f3afb11ade4a0ba6424944456eda6cbc 477 PIRSF PIRSF000485 10 472 4.5E-187 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Amet_0922 f3afb11ade4a0ba6424944456eda6cbc 477 Pfam PF00156 Phosphoribosyl transferase domain 287 384 2.2E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amet_0922 f3afb11ade4a0ba6424944456eda6cbc 477 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 13 455 48.619 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Amet_0922 f3afb11ade4a0ba6424944456eda6cbc 477 Gene3D G3DSA:3.60.20.10 14 457 3.2E-171 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_0922 f3afb11ade4a0ba6424944456eda6cbc 477 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 14 456 4.2E-173 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Amet_0922 f3afb11ade4a0ba6424944456eda6cbc 477 SUPERFAMILY SSF56235 14 256 1.37E-72 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_0922 f3afb11ade4a0ba6424944456eda6cbc 477 Gene3D G3DSA:3.40.50.2020 274 438 3.2E-171 T 12-10-2018 Amet_0922 f3afb11ade4a0ba6424944456eda6cbc 477 Pfam PF13537 Glutamine amidotransferase domain 93 213 6.0E-22 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Amet_0922 f3afb11ade4a0ba6424944456eda6cbc 477 SUPERFAMILY SSF53271 250 471 1.06E-71 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_2070 2ab1c47c1c92a3b81f8a436041d07905 202 SUPERFAMILY SSF46689 3 73 1.03E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2070 2ab1c47c1c92a3b81f8a436041d07905 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 4.4E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_2070 2ab1c47c1c92a3b81f8a436041d07905 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_2070 2ab1c47c1c92a3b81f8a436041d07905 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_2070 2ab1c47c1c92a3b81f8a436041d07905 202 Gene3D G3DSA:1.10.357.10 2 197 9.9E-26 T 12-10-2018 Amet_0234 af8e52b956c27ab5e65a64026726a2e0 306 SUPERFAMILY SSF52540 3 225 6.32E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0234 af8e52b956c27ab5e65a64026726a2e0 306 SMART SM00382 29 211 2.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0234 af8e52b956c27ab5e65a64026726a2e0 306 Pfam PF00005 ABC transporter 21 163 3.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0234 af8e52b956c27ab5e65a64026726a2e0 306 Gene3D G3DSA:3.40.50.300 1 237 1.9E-70 T 12-10-2018 Amet_0234 af8e52b956c27ab5e65a64026726a2e0 306 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0050 492fee352c63bfc0cd4bb6786590a19a 152 SMART SM00344 1 109 5.6E-4 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Amet_0050 492fee352c63bfc0cd4bb6786590a19a 152 Gene3D G3DSA:3.30.70.3460 64 148 4.5E-25 T 12-10-2018 Amet_0050 492fee352c63bfc0cd4bb6786590a19a 152 Gene3D G3DSA:1.10.10.10 1 52 2.7E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0050 492fee352c63bfc0cd4bb6786590a19a 152 SUPERFAMILY SSF46785 1 64 3.62E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0050 492fee352c63bfc0cd4bb6786590a19a 152 Pfam PF13404 AsnC-type helix-turn-helix domain 1 44 1.9E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Amet_4176 0c41ac9939218b1e8c870deadae66006 1149 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1145 0.0 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 Amet_4176 0c41ac9939218b1e8c870deadae66006 1149 Pfam PF12705 PD-(D/E)XK nuclease superfamily 776 1115 6.4E-65 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Amet_4176 0c41ac9939218b1e8c870deadae66006 1149 Gene3D G3DSA:3.40.50.300 511 686 2.9E-42 T 12-10-2018 Amet_4176 0c41ac9939218b1e8c870deadae66006 1149 Gene3D G3DSA:3.40.50.300 274 399 2.2E-27 T 12-10-2018 Amet_4176 0c41ac9939218b1e8c870deadae66006 1149 SUPERFAMILY SSF52980 771 995 5.36E-7 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Amet_4176 0c41ac9939218b1e8c870deadae66006 1149 SUPERFAMILY SSF52540 286 735 3.36E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4176 0c41ac9939218b1e8c870deadae66006 1149 Gene3D G3DSA:3.40.50.300 1 122 2.7E-28 T 12-10-2018 Amet_4176 0c41ac9939218b1e8c870deadae66006 1149 Gene3D G3DSA:3.40.50.300 123 268 4.1E-27 T 12-10-2018 Amet_4176 0c41ac9939218b1e8c870deadae66006 1149 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1146 63.298 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 Amet_1782 d9ab5ebab9c0323062571a81c3ecea09 370 Gene3D G3DSA:3.60.21.10 141 341 4.0E-24 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_1782 d9ab5ebab9c0323062571a81c3ecea09 370 Pfam PF00149 Calcineurin-like phosphoesterase 144 311 2.3E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amet_1782 d9ab5ebab9c0323062571a81c3ecea09 370 SUPERFAMILY SSF56300 144 368 2.1E-34 T 12-10-2018 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 Gene3D G3DSA:3.30.70.1050 2 113 2.8E-33 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 Gene3D G3DSA:1.10.3120.10 114 157 3.4E-5 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 4.0E-42 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 PIRSF PIRSF003095 1 428 1.3E-128 T 12-10-2018 IPR005215 Trigger factor GO:0015031 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 SUPERFAMILY SSF102735 1 130 3.27E-37 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 Gene3D G3DSA:1.10.3120.10 248 428 6.6E-51 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 422 6.4E-39 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 SUPERFAMILY SSF109998 250 427 1.57E-40 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 TIGRFAM TIGR00115 tig: trigger factor 12 421 5.4E-137 T 12-10-2018 IPR005215 Trigger factor GO:0015031 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 Hamap MF_00303 Trigger factor [tig]. 1 428 22.807 T 12-10-2018 IPR005215 Trigger factor GO:0015031 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 SUPERFAMILY SSF54534 89 244 9.23E-34 T 12-10-2018 Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 237 6.0E-13 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Amet_1066 4b8bbbc3cbb82d7d4a0a93b9ea63655b 428 Gene3D G3DSA:3.10.50.40 158 247 1.2E-31 T 12-10-2018 Amet_1039 dcd805b22192618385c311c989fa1be5 513 Gene3D G3DSA:3.20.20.70 4 310 2.5E-49 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1039 dcd805b22192618385c311c989fa1be5 513 SUPERFAMILY SSF48452 356 489 8.54E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1039 dcd805b22192618385c311c989fa1be5 513 Pfam PF13181 Tetratricopeptide repeat 463 491 0.011 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1039 dcd805b22192618385c311c989fa1be5 513 Pfam PF04055 Radical SAM superfamily 11 159 9.5E-22 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_1039 dcd805b22192618385c311c989fa1be5 513 Gene3D G3DSA:1.25.40.10 319 499 8.3E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1039 dcd805b22192618385c311c989fa1be5 513 Pfam PF13186 Iron-sulfur cluster-binding domain 246 311 2.4E-10 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Amet_1039 dcd805b22192618385c311c989fa1be5 513 SUPERFAMILY SSF102114 4 320 7.72E-64 T 12-10-2018 Amet_1039 dcd805b22192618385c311c989fa1be5 513 SMART SM00729 6 206 7.6E-8 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_1039 dcd805b22192618385c311c989fa1be5 513 Pfam PF13353 4Fe-4S single cluster domain 10 117 6.3E-8 T 12-10-2018 Amet_1039 dcd805b22192618385c311c989fa1be5 513 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 246 338 2.6E-14 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain Amet_1039 dcd805b22192618385c311c989fa1be5 513 SMART SM00028 460 493 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1039 dcd805b22192618385c311c989fa1be5 513 SMART SM00028 391 424 200.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1039 dcd805b22192618385c311c989fa1be5 513 SMART SM00028 425 458 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1039 dcd805b22192618385c311c989fa1be5 513 SMART SM00028 357 390 250.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0241 d30ff8ec05c01fd1698bb938f9d83d25 162 Pfam PF12773 Double zinc ribbon 106 157 1.6E-9 T 12-10-2018 IPR025874 Double zinc ribbon Amet_1405 b8cdc36c6d5d332a9b1c34560f0cd6e1 354 Gene3D G3DSA:1.10.443.10 170 350 1.6E-53 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_1405 b8cdc36c6d5d332a9b1c34560f0cd6e1 354 Pfam PF00589 Phage integrase family 179 338 2.1E-42 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_1405 b8cdc36c6d5d332a9b1c34560f0cd6e1 354 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 81 160 3.5E-16 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Amet_1405 b8cdc36c6d5d332a9b1c34560f0cd6e1 354 Gene3D G3DSA:1.10.150.130 78 163 2.7E-21 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Amet_1405 b8cdc36c6d5d332a9b1c34560f0cd6e1 354 SUPERFAMILY SSF56349 89 340 5.89E-54 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_3224 9cf255026fe2f7b09f1e23b4f1d29c5a 291 SUPERFAMILY SSF51621 3 236 1.92E-62 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amet_3224 9cf255026fe2f7b09f1e23b4f1d29c5a 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 225 4.3E-67 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Amet_3224 9cf255026fe2f7b09f1e23b4f1d29c5a 291 Gene3D G3DSA:3.20.20.60 1 290 1.1E-96 T 12-10-2018 Amet_3224 9cf255026fe2f7b09f1e23b4f1d29c5a 291 PIRSF PIRSF015582 1 291 2.6E-85 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like Amet_2837 2d3949a246a7a87df3228741fab7003e 519 Gene3D G3DSA:3.30.420.240 323 516 2.6E-61 T 12-10-2018 Amet_2837 2d3949a246a7a87df3228741fab7003e 519 Pfam PF17289 Terminase RNaseH-like domain 352 508 9.3E-12 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like Amet_2837 2d3949a246a7a87df3228741fab7003e 519 Gene3D G3DSA:3.40.50.300 1 217 8.4E-57 T 12-10-2018 Amet_2221 ca01982731b1f8488a1172171fef7042 118 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 110 1.3E-35 T 12-10-2018 IPR005562 SpoVA Amet_2221 ca01982731b1f8488a1172171fef7042 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 5.6E-47 T 12-10-2018 IPR014204 Sporulation stage V, protein AE Amet_3541 ebed31e17cb80522dc70dbecd8c01559 593 SUPERFAMILY SSF53300 446 589 2.41E-8 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amet_3541 ebed31e17cb80522dc70dbecd8c01559 593 Gene3D G3DSA:3.40.50.410 437 592 3.9E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Amet_3541 ebed31e17cb80522dc70dbecd8c01559 593 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 466 509 1.8E-4 T 12-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 Amet_0644 b47e4ac7218fadcb17e178a712c0693a 332 Gene3D G3DSA:3.30.70.1140 1 75 5.0E-25 T 12-10-2018 Amet_0644 b47e4ac7218fadcb17e178a712c0693a 332 SUPERFAMILY SSF51569 1 331 2.29E-116 T 12-10-2018 Amet_0644 b47e4ac7218fadcb17e178a712c0693a 332 Gene3D G3DSA:3.20.20.70 76 332 1.3E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0644 b47e4ac7218fadcb17e178a712c0693a 332 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 327 8.2E-125 T 12-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Amet_0644 b47e4ac7218fadcb17e178a712c0693a 332 Pfam PF00793 DAHP synthetase I family 87 324 3.9E-75 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Amet_2916 649fda0e08823ea12e1357bdca4f09de 203 SUPERFAMILY SSF55811 15 193 4.6E-29 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amet_2916 649fda0e08823ea12e1357bdca4f09de 203 Gene3D G3DSA:3.90.79.10 8 199 5.6E-48 T 12-10-2018 Amet_2916 649fda0e08823ea12e1357bdca4f09de 203 ProSitePatterns PS00893 Nudix box signature. 58 79 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Amet_2916 649fda0e08823ea12e1357bdca4f09de 203 Pfam PF00293 NUDIX domain 20 131 4.5E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Amet_3812 12c522876a610dc9e7c6598f877e7df8 160 Pfam PF04542 Sigma-70 region 2 8 75 2.9E-10 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_3812 12c522876a610dc9e7c6598f877e7df8 160 Gene3D G3DSA:1.10.10.10 85 160 2.9E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3812 12c522876a610dc9e7c6598f877e7df8 160 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 159 2.2E-23 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_3812 12c522876a610dc9e7c6598f877e7df8 160 Gene3D G3DSA:1.10.1740.10 1 76 1.3E-19 T 12-10-2018 Amet_3812 12c522876a610dc9e7c6598f877e7df8 160 SUPERFAMILY SSF88946 4 84 4.71E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_3812 12c522876a610dc9e7c6598f877e7df8 160 SUPERFAMILY SSF88659 82 159 7.1E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_3712 1e9dc40bd7446ac50efe54d8f60c0caa 232 SUPERFAMILY SSF46894 128 227 1.25E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_3712 1e9dc40bd7446ac50efe54d8f60c0caa 232 SMART SM00862 151 226 2.2E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3712 1e9dc40bd7446ac50efe54d8f60c0caa 232 Gene3D G3DSA:1.10.10.10 130 231 2.6E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3712 1e9dc40bd7446ac50efe54d8f60c0caa 232 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3712 1e9dc40bd7446ac50efe54d8f60c0caa 232 SMART SM00448 2 112 1.9E-41 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3712 1e9dc40bd7446ac50efe54d8f60c0caa 232 SUPERFAMILY SSF52172 1 129 2.42E-40 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3712 1e9dc40bd7446ac50efe54d8f60c0caa 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 1.8E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3712 1e9dc40bd7446ac50efe54d8f60c0caa 232 Gene3D G3DSA:3.40.50.2300 1 129 1.2E-36 T 12-10-2018 Amet_1334 42621e717072ebe148d50458dba045cf 413 SUPERFAMILY SSF51905 5 411 6.89E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1334 42621e717072ebe148d50458dba045cf 413 SUPERFAMILY SSF160996 193 356 2.35E-38 T 12-10-2018 Amet_1334 42621e717072ebe148d50458dba045cf 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 363 385 3.6E-6 T 12-10-2018 Amet_1334 42621e717072ebe148d50458dba045cf 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.6E-6 T 12-10-2018 Amet_1334 42621e717072ebe148d50458dba045cf 413 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 3.6E-6 T 12-10-2018 Amet_1334 42621e717072ebe148d50458dba045cf 413 Gene3D G3DSA:1.10.8.260 273 338 8.6E-131 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily Amet_1334 42621e717072ebe148d50458dba045cf 413 Pfam PF03486 HI0933-like protein 8 408 3.1E-126 T 12-10-2018 Amet_1334 42621e717072ebe148d50458dba045cf 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.7E-6 T 12-10-2018 Amet_1334 42621e717072ebe148d50458dba045cf 413 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 1.7E-6 T 12-10-2018 Amet_1334 42621e717072ebe148d50458dba045cf 413 Gene3D G3DSA:2.40.30.10 192 355 8.6E-131 T 12-10-2018 Amet_1334 42621e717072ebe148d50458dba045cf 413 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 9 407 1.1E-140 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Amet_1334 42621e717072ebe148d50458dba045cf 413 Gene3D G3DSA:3.50.50.60 11 404 8.6E-131 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3109 2f4a83b1b8c3a38b388899113557ebcd 116 SUPERFAMILY SSF55298 3 115 4.24E-30 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amet_3109 2f4a83b1b8c3a38b388899113557ebcd 116 Pfam PF01042 Endoribonuclease L-PSP 7 114 3.4E-22 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Amet_3109 2f4a83b1b8c3a38b388899113557ebcd 116 Gene3D G3DSA:3.30.1330.40 1 116 2.4E-37 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amet_2706 9d823062d38681eca19c6f819e2bcff6 89 PIRSF PIRSF004669 1 89 3.5E-31 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amet_2706 9d823062d38681eca19c6f819e2bcff6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.9E-20 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amet_2706 9d823062d38681eca19c6f819e2bcff6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.9E-20 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amet_2706 9d823062d38681eca19c6f819e2bcff6 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.9E-20 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amet_2706 9d823062d38681eca19c6f819e2bcff6 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.0E-30 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Amet_2706 9d823062d38681eca19c6f819e2bcff6 89 Pfam PF01313 Bacterial export proteins, family 3 5 77 9.8E-28 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Amet_1154 d0b57dad86648cd33fc203a790a83c9d 401 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 2 392 1.3E-144 T 12-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 Amet_1154 d0b57dad86648cd33fc203a790a83c9d 401 PIRSF PIRSF007313 163 399 6.7E-74 T 12-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 Amet_1154 d0b57dad86648cd33fc203a790a83c9d 401 PIRSF PIRSF007313 1 180 1.5E-62 T 12-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 Amet_4033 5fe43ac8e673f04ee818c67156602061 521 Gene3D G3DSA:3.40.50.300 3 215 9.9E-24 T 12-10-2018 Amet_4033 5fe43ac8e673f04ee818c67156602061 521 Pfam PF03354 Phage Terminase 38 501 1.6E-75 T 12-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type Amet_2224 8838593db10c05d050bb3edb8bc23ff6 225 PIRSF PIRSF021383 1 222 6.9E-53 T 12-10-2018 IPR014197 Sporulation protein YunB Amet_2224 8838593db10c05d050bb3edb8bc23ff6 225 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 12 210 4.4E-61 T 12-10-2018 IPR014197 Sporulation protein YunB Amet_2224 8838593db10c05d050bb3edb8bc23ff6 225 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 119 206 1.5E-32 T 12-10-2018 IPR014197 Sporulation protein YunB Amet_1380 519a3d4aeead4ccd839ebb90f3cdc222 535 Pfam PF02554 Carbon starvation protein CstA 1 347 4.1E-126 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Amet_1380 519a3d4aeead4ccd839ebb90f3cdc222 535 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 373 488 2.0E-37 T 12-10-2018 IPR025299 CstA, C-terminal domain Amet_3567 119bab819775c52d48817e260606f738 423 SUPERFAMILY SSF55874 280 421 2.1E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3567 119bab819775c52d48817e260606f738 423 Gene3D G3DSA:3.30.565.10 267 420 5.3E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3567 119bab819775c52d48817e260606f738 423 SMART SM00387 314 423 3.6E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3567 119bab819775c52d48817e260606f738 423 Pfam PF14501 GHKL domain 316 413 2.0E-15 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Amet_2733 2cddb975cb43690d6c3bfe524f12956c 257 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 149 248 2.6E-11 T 12-10-2018 IPR018745 Domain of unknown function DUF2294 Amet_2733 2cddb975cb43690d6c3bfe524f12956c 257 SUPERFAMILY SSF52172 8 124 1.57E-28 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2733 2cddb975cb43690d6c3bfe524f12956c 257 Pfam PF00072 Response regulator receiver domain 12 120 3.6E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2733 2cddb975cb43690d6c3bfe524f12956c 257 SMART SM00448 10 121 1.7E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2733 2cddb975cb43690d6c3bfe524f12956c 257 Gene3D G3DSA:3.40.50.2300 7 133 1.8E-26 T 12-10-2018 Amet_1895 047c770667a09e963359177d4c5c97d8 116 Gene3D G3DSA:3.40.1440.10 17 112 3.0E-12 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amet_2026 53af200a2c7269c005084450997d47db 455 Pfam PF04060 Putative Fe-S cluster 13 43 9.1E-12 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 Amet_2026 53af200a2c7269c005084450997d47db 455 Pfam PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit 65 443 6.4E-88 T 12-10-2018 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel Amet_2026 53af200a2c7269c005084450997d47db 455 Gene3D G3DSA:3.20.20.20 1 319 9.0E-96 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2026 53af200a2c7269c005084450997d47db 455 Gene3D G3DSA:3.40.50.11600 320 449 3.5E-45 T 12-10-2018 Amet_2026 53af200a2c7269c005084450997d47db 455 PIRSF PIRSF000376 1 452 4.5E-132 T 12-10-2018 IPR016218 Acetyl-CoA decarbonylase/synthase complex, gamma subunit GO:0005506|GO:0008168|GO:0046356 Amet_0769 eeda8466120c6de01f52d1c7daa8da17 289 SUPERFAMILY SSF55729 122 283 1.36E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_0769 eeda8466120c6de01f52d1c7daa8da17 289 Gene3D G3DSA:3.40.630.30 2 136 6.7E-20 T 12-10-2018 Amet_0769 eeda8466120c6de01f52d1c7daa8da17 289 Pfam PF00583 Acetyltransferase (GNAT) family 191 276 1.1E-14 T 12-10-2018 IPR000182 GNAT domain Amet_0769 eeda8466120c6de01f52d1c7daa8da17 289 Pfam PF00583 Acetyltransferase (GNAT) family 36 129 5.1E-14 T 12-10-2018 IPR000182 GNAT domain Amet_0769 eeda8466120c6de01f52d1c7daa8da17 289 Gene3D G3DSA:3.40.630.30 147 289 6.4E-25 T 12-10-2018 Amet_0769 eeda8466120c6de01f52d1c7daa8da17 289 SUPERFAMILY SSF55729 1 132 3.49E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1559 3b3061909740abbebda4cb456b49e401 220 SUPERFAMILY SSF46894 154 219 4.08E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_1559 3b3061909740abbebda4cb456b49e401 220 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1559 3b3061909740abbebda4cb456b49e401 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 214 1.0E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1559 3b3061909740abbebda4cb456b49e401 220 Gene3D G3DSA:3.40.50.12740 4 220 1.3E-67 T 12-10-2018 Amet_1559 3b3061909740abbebda4cb456b49e401 220 SMART SM00448 4 117 4.1E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1559 3b3061909740abbebda4cb456b49e401 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 1.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1559 3b3061909740abbebda4cb456b49e401 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 1.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1559 3b3061909740abbebda4cb456b49e401 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 1.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1559 3b3061909740abbebda4cb456b49e401 220 SMART SM00421 158 215 4.2E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1559 3b3061909740abbebda4cb456b49e401 220 SUPERFAMILY SSF52172 3 132 1.99E-34 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0867 ca2428eeaf71a4257a6edca88b81b2c9 338 Gene3D G3DSA:1.10.260.40 27 137 1.2E-20 T 12-10-2018 Amet_0867 ca2428eeaf71a4257a6edca88b81b2c9 338 Pfam PF13274 Protein of unknown function (DUF4065) 214 319 9.8E-21 T 12-10-2018 IPR025272 Domain of unknown function DUF4065 Amet_0867 ca2428eeaf71a4257a6edca88b81b2c9 338 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 11 117 3.3E-7 T 12-10-2018 IPR032758 Antitoxin MqsA/HigA-2 Amet_0867 ca2428eeaf71a4257a6edca88b81b2c9 338 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 11 136 2.8E-33 T 12-10-2018 IPR022452 Antitoxin MqsA Amet_0867 ca2428eeaf71a4257a6edca88b81b2c9 338 SUPERFAMILY SSF47413 79 126 1.3E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0294 c21be984a18fb525349e5c5bd8cf118a 184 Pfam PF14278 Transcriptional regulator C-terminal region 76 152 1.3E-10 T 12-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type Amet_0294 c21be984a18fb525349e5c5bd8cf118a 184 SUPERFAMILY SSF46689 3 59 1.05E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0294 c21be984a18fb525349e5c5bd8cf118a 184 Gene3D G3DSA:1.10.357.10 1 183 2.7E-49 T 12-10-2018 Amet_2882 79cb2379b6ae3f5fd91d762e3e3c37ac 331 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 18 330 3.6E-97 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2882 79cb2379b6ae3f5fd91d762e3e3c37ac 331 ProSitePatterns PS01348 MraY family signature 2. 177 188 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2882 79cb2379b6ae3f5fd91d762e3e3c37ac 331 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 6 331 23.289 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2882 79cb2379b6ae3f5fd91d762e3e3c37ac 331 Pfam PF00953 Glycosyl transferase family 4 79 257 7.0E-39 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Amet_4562 1fd99c17166bfe5eebecbbcdb7305b3c 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amet_4562 1fd99c17166bfe5eebecbbcdb7305b3c 391 Gene3D G3DSA:3.40.640.10 61 281 3.6E-117 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_4562 1fd99c17166bfe5eebecbbcdb7305b3c 391 Pfam PF00155 Aminotransferase class I and II 30 379 1.3E-64 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_4562 1fd99c17166bfe5eebecbbcdb7305b3c 391 SUPERFAMILY SSF53383 5 381 3.9E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_4562 1fd99c17166bfe5eebecbbcdb7305b3c 391 Gene3D G3DSA:3.90.1150.10 25 379 3.6E-117 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3191 cf42cba228ed08a9613c687e019e55f9 222 Gene3D G3DSA:3.20.20.70 65 220 3.1E-10 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3191 cf42cba228ed08a9613c687e019e55f9 222 SUPERFAMILY SSF51412 68 201 4.76E-13 T 12-10-2018 Amet_0530 2d8a2c1e1889001a26a10c83882bdb8a 118 Gene3D G3DSA:3.30.1380.10 9 118 7.9E-27 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_0530 2d8a2c1e1889001a26a10c83882bdb8a 118 SUPERFAMILY SSF55166 9 111 4.71E-30 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_0530 2d8a2c1e1889001a26a10c83882bdb8a 118 Pfam PF08291 Peptidase M15 8 108 4.9E-26 T 12-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 Amet_2635 16f44786f78e2434b72ece47e40c380f 68 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 49 60 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_2635 16f44786f78e2434b72ece47e40c380f 68 SUPERFAMILY SSF54862 6 66 1.89E-16 T 12-10-2018 Amet_2635 16f44786f78e2434b72ece47e40c380f 68 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 19 30 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_2635 16f44786f78e2434b72ece47e40c380f 68 Gene3D G3DSA:3.30.70.20 2 41 2.3E-6 T 12-10-2018 Amet_2635 16f44786f78e2434b72ece47e40c380f 68 Gene3D G3DSA:3.30.70.20 42 68 1.9E-5 T 12-10-2018 Amet_2635 16f44786f78e2434b72ece47e40c380f 68 Pfam PF13187 4Fe-4S dicluster domain 19 64 2.1E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4268 361d0d981c904ea29ca5febea09b06c4 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Amet_4268 361d0d981c904ea29ca5febea09b06c4 316 Pfam PF00294 pfkB family carbohydrate kinase 7 291 3.4E-53 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB Amet_4268 361d0d981c904ea29ca5febea09b06c4 316 Gene3D G3DSA:3.40.1190.20 1 314 5.8E-97 T 12-10-2018 IPR029056 Ribokinase-like Amet_4268 361d0d981c904ea29ca5febea09b06c4 316 SUPERFAMILY SSF53613 1 298 2.03E-70 T 12-10-2018 IPR029056 Ribokinase-like Amet_4268 361d0d981c904ea29ca5febea09b06c4 316 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 305 6.9E-97 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 Amet_4268 361d0d981c904ea29ca5febea09b06c4 316 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 306 4.6E-98 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Amet_4268 361d0d981c904ea29ca5febea09b06c4 316 PIRSF PIRSF000535 1 308 3.0E-87 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 Amet_4599 e2157ffc4c295e8435bbf9a1575448c6 412 Gene3D G3DSA:3.30.300.210 255 411 2.2E-30 T 12-10-2018 IPR038501 Spore germination GerAC superfamily Amet_4599 e2157ffc4c295e8435bbf9a1575448c6 412 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 411 5.0E-73 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_4599 e2157ffc4c295e8435bbf9a1575448c6 412 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 240 409 1.4E-31 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_3219 6a0019213bab91841743397f29628e05 515 SUPERFAMILY SSF52096 224 514 9.6E-95 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_3219 6a0019213bab91841743397f29628e05 515 Gene3D G3DSA:3.90.226.10 2 257 6.9E-92 T 12-10-2018 Amet_3219 6a0019213bab91841743397f29628e05 515 SUPERFAMILY SSF52096 4 254 1.74E-77 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_3219 6a0019213bab91841743397f29628e05 515 Pfam PF01039 Carboxyl transferase domain 28 513 3.2E-199 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Amet_3219 6a0019213bab91841743397f29628e05 515 Gene3D G3DSA:3.90.226.10 259 515 3.0E-94 T 12-10-2018 Amet_4405 8e0626e1c410f1df77f66fb982aae9a1 613 SUPERFAMILY SSF52402 230 574 9.57E-69 T 12-10-2018 Amet_4405 8e0626e1c410f1df77f66fb982aae9a1 613 PIRSF PIRSF001589 1 613 7.9E-137 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Amet_4405 8e0626e1c410f1df77f66fb982aae9a1 613 SUPERFAMILY SSF56235 1 226 1.72E-61 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_4405 8e0626e1c410f1df77f66fb982aae9a1 613 Pfam PF00733 Asparagine synthase 242 605 4.2E-87 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Amet_4405 8e0626e1c410f1df77f66fb982aae9a1 613 Pfam PF13537 Glutamine amidotransferase domain 48 169 6.0E-45 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Amet_4405 8e0626e1c410f1df77f66fb982aae9a1 613 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 533 2.6E-158 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Amet_4405 8e0626e1c410f1df77f66fb982aae9a1 613 Gene3D G3DSA:3.60.20.10 2 184 4.9E-61 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_3184 41ed0a6172b72c309f7afe6b67a0f25d 221 SMART SM00938 127 220 0.0031 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3184 41ed0a6172b72c309f7afe6b67a0f25d 221 Gene3D G3DSA:3.30.70.120 123 219 6.4E-22 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amet_3184 41ed0a6172b72c309f7afe6b67a0f25d 221 Gene3D G3DSA:3.30.70.120 9 107 1.1E-12 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amet_3184 41ed0a6172b72c309f7afe6b67a0f25d 221 SUPERFAMILY SSF54913 125 219 2.45E-18 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amet_3184 41ed0a6172b72c309f7afe6b67a0f25d 221 SUPERFAMILY SSF54913 7 105 9.27E-13 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amet_3184 41ed0a6172b72c309f7afe6b67a0f25d 221 Pfam PF00543 Nitrogen regulatory protein P-II 128 218 9.6E-6 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_1079 346de3edabc92030e7a26075c09434b0 340 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 334 38.954 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Amet_1079 346de3edabc92030e7a26075c09434b0 340 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 333 1.8E-132 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Amet_1079 346de3edabc92030e7a26075c09434b0 340 SUPERFAMILY SSF47648 2 69 5.76E-20 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_1079 346de3edabc92030e7a26075c09434b0 340 SUPERFAMILY SSF52418 74 337 4.06E-97 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_1079 346de3edabc92030e7a26075c09434b0 340 Pfam PF00591 Glycosyl transferase family, a/b domain 75 324 8.5E-99 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_1079 346de3edabc92030e7a26075c09434b0 340 Gene3D G3DSA:1.20.970.10 1 70 7.7E-26 T 12-10-2018 Amet_1079 346de3edabc92030e7a26075c09434b0 340 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 7.9E-21 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_1079 346de3edabc92030e7a26075c09434b0 340 Gene3D G3DSA:3.40.1030.10 71 340 3.6E-111 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Amet_0143 4b73fc12effe427080fadaf3d7ffdfa1 109 Pfam PF14034 Sporulation protein YtrH 7 105 2.9E-38 T 12-10-2018 IPR025689 Sporulation protein YtrH Amet_4623 e41c2194f87ddf9fc67cc31f5d51a6fc 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 301 7.0E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_4623 e41c2194f87ddf9fc67cc31f5d51a6fc 310 SUPERFAMILY SSF161098 39 299 7.38E-36 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4623 e41c2194f87ddf9fc67cc31f5d51a6fc 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 27 305 5.5E-83 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Amet_4623 e41c2194f87ddf9fc67cc31f5d51a6fc 310 Gene3D G3DSA:1.10.3720.10 73 308 5.0E-35 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2120 fd41cad3eecb9db5a6d6d62625c75e32 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 113 7.3E-15 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amet_2120 fd41cad3eecb9db5a6d6d62625c75e32 136 SUPERFAMILY SSF54593 2 128 2.42E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_2120 fd41cad3eecb9db5a6d6d62625c75e32 136 Gene3D G3DSA:3.10.180.10 2 135 5.3E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4136 29b43155c9282733fecda8a7c50e2944 159 Pfam PF14343 PrcB C-terminal 82 143 5.5E-16 T 12-10-2018 IPR025748 PrcB C-terminal domain Amet_4612 bec4991bdc2aa2e2140f04b4f15a1275 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 4.9E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_4612 bec4991bdc2aa2e2140f04b4f15a1275 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 4.9E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_4612 bec4991bdc2aa2e2140f04b4f15a1275 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 4.9E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_4612 bec4991bdc2aa2e2140f04b4f15a1275 145 Gene3D G3DSA:1.10.10.10 3 144 2.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4612 bec4991bdc2aa2e2140f04b4f15a1275 145 SUPERFAMILY SSF46785 10 143 1.67E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4612 bec4991bdc2aa2e2140f04b4f15a1275 145 Pfam PF01047 MarR family 35 93 4.8E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_4612 bec4991bdc2aa2e2140f04b4f15a1275 145 SMART SM00347 28 128 5.4E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_4612 bec4991bdc2aa2e2140f04b4f15a1275 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 101 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Amet_2475 d3c8522ba289fc124fbd54c97108da7f 528 SMART SM00857 3 150 4.3E-56 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_2475 d3c8522ba289fc124fbd54c97108da7f 528 Pfam PF13408 Recombinase zinc beta ribbon domain 329 393 5.2E-12 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_2475 d3c8522ba289fc124fbd54c97108da7f 528 Gene3D G3DSA:1.10.10.2600 135 316 2.5E-6 T 12-10-2018 IPR038109 DNA-binding recombinase domain superfamily Amet_2475 d3c8522ba289fc124fbd54c97108da7f 528 Gene3D G3DSA:3.40.50.1390 1 133 4.1E-40 T 12-10-2018 Amet_2475 d3c8522ba289fc124fbd54c97108da7f 528 SUPERFAMILY SSF53041 1 150 1.57E-36 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_2475 d3c8522ba289fc124fbd54c97108da7f 528 Pfam PF00239 Resolvase, N terminal domain 3 150 4.7E-39 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_2475 d3c8522ba289fc124fbd54c97108da7f 528 Pfam PF07508 Recombinase 184 312 1.2E-21 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 SMART SM00448 1 114 6.7E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 201 7.1E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 SUPERFAMILY SSF52172 2 131 5.27E-34 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 SMART SM00421 146 203 2.4E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 SUPERFAMILY SSF46894 142 205 4.76E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 Gene3D G3DSA:3.40.50.12740 1 206 2.3E-68 T 12-10-2018 Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.7E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_4202 3e3644c769c5cf7ed8f1397e4039d95d 208 Pfam PF00072 Response regulator receiver domain 3 114 1.6E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0251 11abfe38c059b9ad8587672414cd57dd 142 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 139 1.3E-46 T 12-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Amet_0251 11abfe38c059b9ad8587672414cd57dd 142 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 139 1.3E-59 T 12-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Amet_0251 11abfe38c059b9ad8587672414cd57dd 142 PIRSF PIRSF036409 1 142 1.7E-49 T 12-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Amet_0251 11abfe38c059b9ad8587672414cd57dd 142 Gene3D G3DSA:3.40.50.300 1 141 2.3E-13 T 12-10-2018 Amet_0251 11abfe38c059b9ad8587672414cd57dd 142 SUPERFAMILY SSF52540 3 133 4.83E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1505 90cc9532ad28a7dec92ceb49b39893e5 155 Gene3D G3DSA:1.10.8.10 1 57 4.7E-8 T 12-10-2018 Amet_1505 90cc9532ad28a7dec92ceb49b39893e5 155 Pfam PF14242 Domain of unknown function (DUF4342) 53 120 8.6E-20 T 12-10-2018 IPR025642 Domain of unknown function DUF4342 Amet_1505 90cc9532ad28a7dec92ceb49b39893e5 155 SUPERFAMILY SSF46934 2 52 1.33E-11 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 Amet_1158 1f8cdc282db1d553c747687365c64ebf 235 SUPERFAMILY SSF52540 4 230 6.27E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1158 1f8cdc282db1d553c747687365c64ebf 235 SMART SM00382 35 230 1.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1158 1f8cdc282db1d553c747687365c64ebf 235 Pfam PF00005 ABC transporter 26 181 1.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1158 1f8cdc282db1d553c747687365c64ebf 235 Gene3D G3DSA:3.40.50.300 1 234 7.2E-56 T 12-10-2018 Amet_0817 c3f504985857fa8ed79f7e31d38c1dc1 562 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 1 553 5.3E-119 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 Amet_0817 c3f504985857fa8ed79f7e31d38c1dc1 562 Pfam PF02652 L-lactate permease 2 551 2.2E-122 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 Amet_2262 63ab0324382ef47c8748789cac3460c9 212 SUPERFAMILY SSF56784 1 210 5.65E-33 T 12-10-2018 IPR036412 HAD-like superfamily Amet_2262 63ab0324382ef47c8748789cac3460c9 212 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 7 177 5.7E-22 T 12-10-2018 Amet_2262 63ab0324382ef47c8748789cac3460c9 212 Gene3D G3DSA:1.10.150.210 16 78 2.1E-41 T 12-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 Amet_2262 63ab0324382ef47c8748789cac3460c9 212 Gene3D G3DSA:3.40.50.1000 5 197 2.1E-41 T 12-10-2018 IPR023214 HAD superfamily Amet_2262 63ab0324382ef47c8748789cac3460c9 212 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 175 5.5E-20 T 12-10-2018 Amet_4066 3bc228b461915d0c9b9b48295a5a883b 390 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 31 218 4.0E-17 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_4066 3bc228b461915d0c9b9b48295a5a883b 390 Gene3D G3DSA:3.60.40.10 1 226 4.6E-29 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_4066 3bc228b461915d0c9b9b48295a5a883b 390 SUPERFAMILY SSF81606 8 219 1.16E-10 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_4066 3bc228b461915d0c9b9b48295a5a883b 390 SMART SM00331 4 218 1.0E-4 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 Gene3D G3DSA:3.40.50.20 1 118 1.1E-35 T 12-10-2018 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 Gene3D G3DSA:3.30.470.20 119 343 4.4E-71 T 12-10-2018 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 PIRSF PIRSF039102 1 352 3.0E-105 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 97 108 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 Gene3D G3DSA:3.30.1490.20 145 217 4.4E-71 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 SUPERFAMILY SSF52440 1 128 3.17E-35 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 Pfam PF01820 D-ala D-ala ligase N-terminus 4 119 8.0E-30 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 SUPERFAMILY SSF56059 130 347 4.6E-52 T 12-10-2018 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 Pfam PF07478 D-ala D-ala ligase C-terminus 137 340 2.5E-64 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 285 313 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 344 38.32 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_3710 d4ccf43330bc15cd1a88ae7e10f32458 358 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 343 3.3E-103 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4741 e101eb162da2e55e8844ec72af387bfd 448 SUPERFAMILY SSF56954 145 211 3.75E-5 T 12-10-2018 Amet_4741 e101eb162da2e55e8844ec72af387bfd 448 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 191 332 8.2E-13 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Amet_4741 e101eb162da2e55e8844ec72af387bfd 448 Pfam PF13533 Biotin-lipoyl like 82 116 3.0E-5 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Amet_0005 82442b2e9ee2bef3d2406b458a9f9ddb 95 Pfam PF04025 Domain of unknown function (DUF370) 2 63 5.5E-7 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A Amet_1669 7a42bd10ea4216c25ce3d6bf6d264d4f 347 Pfam PF03358 NADPH-dependent FMN reductase 161 315 3.5E-21 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Amet_1669 7a42bd10ea4216c25ce3d6bf6d264d4f 347 SUPERFAMILY SSF52218 160 345 1.16E-20 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1669 7a42bd10ea4216c25ce3d6bf6d264d4f 347 Gene3D G3DSA:3.40.50.360 161 347 7.1E-26 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_3185 c7cc70da8e36493496cbe21af4508420 496 Pfam PF07556 Protein of unknown function (DUF1538) 272 482 1.5E-67 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 Amet_3185 c7cc70da8e36493496cbe21af4508420 496 Pfam PF07556 Protein of unknown function (DUF1538) 18 228 7.7E-59 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 Amet_1419 f7c472ce50a2588890355ba75ab0516a 157 SUPERFAMILY SSF55729 1 135 8.72E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1419 f7c472ce50a2588890355ba75ab0516a 157 Gene3D G3DSA:3.40.630.30 2 148 1.2E-22 T 12-10-2018 Amet_1419 f7c472ce50a2588890355ba75ab0516a 157 Pfam PF00583 Acetyltransferase (GNAT) family 41 125 4.5E-15 T 12-10-2018 IPR000182 GNAT domain Amet_4505 5ec96a5cbd541115a7de50fbb0071024 159 Gene3D G3DSA:3.30.1330.50 1 158 1.5E-68 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amet_4505 5ec96a5cbd541115a7de50fbb0071024 159 SUPERFAMILY SSF69765 1 154 3.01E-66 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amet_4505 5ec96a5cbd541115a7de50fbb0071024 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.722 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amet_4505 5ec96a5cbd541115a7de50fbb0071024 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 154 8.9E-68 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amet_4505 5ec96a5cbd541115a7de50fbb0071024 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amet_4505 5ec96a5cbd541115a7de50fbb0071024 159 Pfam PF02542 YgbB family 1 154 3.0E-66 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Amet_1303 34d5321317d83a26fd3ef15406d54f07 235 Gene3D G3DSA:3.40.50.12740 2 205 1.3E-35 T 12-10-2018 Amet_1303 34d5321317d83a26fd3ef15406d54f07 235 Pfam PF00072 Response regulator receiver domain 4 115 1.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1303 34d5321317d83a26fd3ef15406d54f07 235 PIRSF PIRSF006171 1 226 2.9E-80 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 Amet_1303 34d5321317d83a26fd3ef15406d54f07 235 SUPERFAMILY SSF52172 1 186 7.26E-37 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1303 34d5321317d83a26fd3ef15406d54f07 235 SMART SM00448 2 115 1.7E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2084 fe5cf73d7b3aa84a6cf5ff371d759888 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 2.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_2084 fe5cf73d7b3aa84a6cf5ff371d759888 215 SUPERFAMILY SSF46689 4 80 2.26E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_2084 fe5cf73d7b3aa84a6cf5ff371d759888 215 Gene3D G3DSA:1.10.357.10 6 181 1.1E-23 T 12-10-2018 Amet_2084 fe5cf73d7b3aa84a6cf5ff371d759888 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amet_2671 58e0921ba4f8dbc2643b86c3bbbb4ff9 324 Gene3D G3DSA:3.10.310.30 202 323 2.4E-33 T 12-10-2018 Amet_2671 58e0921ba4f8dbc2643b86c3bbbb4ff9 324 Pfam PF02272 DHHA1 domain 238 316 2.2E-11 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Amet_2671 58e0921ba4f8dbc2643b86c3bbbb4ff9 324 Pfam PF01368 DHH family 19 160 8.9E-17 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_2671 58e0921ba4f8dbc2643b86c3bbbb4ff9 324 Gene3D G3DSA:3.90.1640.10 7 200 8.8E-56 T 12-10-2018 Amet_2671 58e0921ba4f8dbc2643b86c3bbbb4ff9 324 SUPERFAMILY SSF64182 17 305 1.83E-67 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 Pfam PF04552 Sigma-54, DNA binding domain 302 461 7.7E-65 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 441 448 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 51 6.6E-17 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 PIRSF PIRSF000774 1 462 1.0E-157 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 460 1.8E-144 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 Gene3D G3DSA:1.10.10.1330 107 218 5.1E-28 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 Gene3D G3DSA:1.10.10.60 402 460 3.9E-22 T 12-10-2018 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 Pfam PF04963 Sigma-54 factor, core binding domain 100 287 2.4E-58 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 PRINTS PR00045 Sigma-54 factor signature 173 190 4.5E-26 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 PRINTS PR00045 Sigma-54 factor signature 361 373 4.5E-26 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 PRINTS PR00045 Sigma-54 factor signature 377 388 4.5E-26 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 PRINTS PR00045 Sigma-54 factor signature 436 454 4.5E-26 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Amet_3582 18be0439903dd6290ef859ae2c4f92be 462 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Amet_3772 f39c578720a658637458e0a124ffea2f 335 Gene3D G3DSA:1.10.3470.10 3 335 6.6E-89 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Amet_3772 f39c578720a658637458e0a124ffea2f 335 SUPERFAMILY SSF81345 3 333 7.06E-75 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Amet_3772 f39c578720a658637458e0a124ffea2f 335 Pfam PF01032 FecCD transport family 16 333 1.1E-88 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amet_2539 5a8162814a4be546c3d9ed46d70e6311 201 Pfam PF01926 50S ribosome-binding GTPase 4 157 1.6E-12 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_2539 5a8162814a4be546c3d9ed46d70e6311 201 SUPERFAMILY SSF52540 2 193 3.4E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2539 5a8162814a4be546c3d9ed46d70e6311 201 Gene3D G3DSA:3.40.50.300 2 200 4.5E-24 T 12-10-2018 Amet_0851 37609acd321d20e52b1a440494f1e7b8 221 Gene3D G3DSA:3.30.40.60 4 110 1.4E-5 T 12-10-2018 Amet_0851 37609acd321d20e52b1a440494f1e7b8 221 TIGRFAM TIGR02646 TIGR02646: TIGR02646 family protein 34 160 1.7E-21 T 12-10-2018 IPR013467 Conserved hypothetical protein CHP02646 Amet_2216 3e54d38c29afdb154d4637f8c95928ca 193 Gene3D G3DSA:2.60.480.10 1 82 6.8E-6 T 12-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily Amet_2216 3e54d38c29afdb154d4637f8c95928ca 193 Pfam PF12164 Stage V sporulation protein AA 1 71 3.0E-7 T 12-10-2018 IPR021997 Stage V sporulation protein AA Amet_3502 133a378e0a972e0a3e5fb8bb52fb5bb7 71 Pfam PF02597 ThiS family 3 67 8.6E-11 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Amet_3502 133a378e0a972e0a3e5fb8bb52fb5bb7 71 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 67 3.4E-19 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis Amet_3502 133a378e0a972e0a3e5fb8bb52fb5bb7 71 Gene3D G3DSA:3.10.20.30 1 70 1.3E-24 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_3502 133a378e0a972e0a3e5fb8bb52fb5bb7 71 SUPERFAMILY SSF54285 2 66 1.12E-15 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Amet_1708 5ebbea2b769903272d0f194e3c617267 367 Gene3D G3DSA:2.40.37.20 6 363 1.2E-99 T 12-10-2018 Amet_1708 5ebbea2b769903272d0f194e3c617267 367 Pfam PF14031 Putative serine dehydratase domain 253 348 5.0E-19 T 12-10-2018 IPR026956 D-serine dehydratase-like domain Amet_1708 5ebbea2b769903272d0f194e3c617267 367 SUPERFAMILY SSF51419 13 242 2.24E-36 T 12-10-2018 IPR029066 PLP-binding barrel Amet_1708 5ebbea2b769903272d0f194e3c617267 367 SMART SM01119 253 350 5.3E-36 T 12-10-2018 IPR026956 D-serine dehydratase-like domain Amet_1708 5ebbea2b769903272d0f194e3c617267 367 Pfam PF01168 Alanine racemase, N-terminal domain 13 236 1.8E-26 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Amet_1708 5ebbea2b769903272d0f194e3c617267 367 Gene3D G3DSA:3.20.20.10 15 236 1.2E-99 T 12-10-2018 IPR029066 PLP-binding barrel Amet_3398 9f1508fcdfb545352a710673cab4bbb0 89 Pfam PF13740 ACT domain 5 77 3.2E-15 T 12-10-2018 Amet_3398 9f1508fcdfb545352a710673cab4bbb0 89 SUPERFAMILY SSF55021 1 83 5.24E-18 T 12-10-2018 Amet_3398 9f1508fcdfb545352a710673cab4bbb0 89 Hamap MF_01054 UPF0237 protein . 1 89 24.363 T 12-10-2018 IPR022986 Uncharacterised protein family UPF0237, ACT-type Amet_3398 9f1508fcdfb545352a710673cab4bbb0 89 Gene3D G3DSA:3.30.70.260 1 89 3.0E-23 T 12-10-2018 Amet_1394 5afb74c22480bb5cf85d52ab25f46c4d 652 Gene3D G3DSA:3.90.1010.20 69 133 1.6E-5 T 12-10-2018 Amet_1394 5afb74c22480bb5cf85d52ab25f46c4d 652 SMART SM00900 46 120 2.4E-19 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_1394 5afb74c22480bb5cf85d52ab25f46c4d 652 SUPERFAMILY SSF56425 418 576 1.01E-22 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_1394 5afb74c22480bb5cf85d52ab25f46c4d 652 SUPERFAMILY SSF51905 139 645 1.95E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_1394 5afb74c22480bb5cf85d52ab25f46c4d 652 Pfam PF00890 FAD binding domain 145 616 1.5E-50 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_1394 5afb74c22480bb5cf85d52ab25f46c4d 652 Pfam PF04205 FMN-binding domain 46 117 5.6E-15 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_2463 a50e6d99517c70cc6766f9388500ca20 88 Pfam PF06949 Protein of unknown function (DUF1292) 14 82 4.5E-15 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 Amet_2463 a50e6d99517c70cc6766f9388500ca20 88 Hamap MF_01448 UPF0473 protein . 5 84 13.417 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 Amet_1653 92ba19c849704f61f7a260703c3ee337 286 Pfam PF00005 ABC transporter 25 166 3.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1653 92ba19c849704f61f7a260703c3ee337 286 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1653 92ba19c849704f61f7a260703c3ee337 286 Gene3D G3DSA:3.40.50.300 4 270 9.5E-64 T 12-10-2018 Amet_1653 92ba19c849704f61f7a260703c3ee337 286 SUPERFAMILY SSF52540 3 229 8.65E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1653 92ba19c849704f61f7a260703c3ee337 286 SMART SM00382 31 215 7.4E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1993 08e3dd1facb9171af1a17b65f28bb65d 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 3.9E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1993 08e3dd1facb9171af1a17b65f28bb65d 225 SUPERFAMILY SSF46894 125 222 3.97E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_1993 08e3dd1facb9171af1a17b65f28bb65d 225 SMART SM00448 1 112 8.1E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1993 08e3dd1facb9171af1a17b65f28bb65d 225 SUPERFAMILY SSF52172 1 118 2.42E-40 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1993 08e3dd1facb9171af1a17b65f28bb65d 225 SMART SM00862 146 221 2.6E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1993 08e3dd1facb9171af1a17b65f28bb65d 225 Pfam PF00072 Response regulator receiver domain 3 113 4.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1993 08e3dd1facb9171af1a17b65f28bb65d 225 Gene3D G3DSA:1.10.10.10 125 225 5.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1993 08e3dd1facb9171af1a17b65f28bb65d 225 Gene3D G3DSA:3.40.50.2300 1 124 2.0E-40 T 12-10-2018 Amet_4042 a7b43fea4a3d4557320ffc8a967aea80 124 SMART SM00507 54 107 7.6E-11 T 12-10-2018 IPR003615 HNH nuclease Amet_4042 a7b43fea4a3d4557320ffc8a967aea80 124 Pfam PF01844 HNH endonuclease 66 111 4.2E-15 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Amet_4042 a7b43fea4a3d4557320ffc8a967aea80 124 Gene3D G3DSA:3.30.40.60 23 122 2.2E-10 T 12-10-2018 Amet_0315 e319ff07c2d950d16b66a8998ff0b10e 451 Pfam PF00209 Sodium:neurotransmitter symporter family 10 124 1.1E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0315 e319ff07c2d950d16b66a8998ff0b10e 451 Pfam PF00209 Sodium:neurotransmitter symporter family 154 449 1.4E-39 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0315 e319ff07c2d950d16b66a8998ff0b10e 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 2.5E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0315 e319ff07c2d950d16b66a8998ff0b10e 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 2.5E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0315 e319ff07c2d950d16b66a8998ff0b10e 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 2.5E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0315 e319ff07c2d950d16b66a8998ff0b10e 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 2.5E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0315 e319ff07c2d950d16b66a8998ff0b10e 451 SUPERFAMILY SSF161070 10 450 9.94E-148 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Amet_1339 eab646d72a1706f15a96fe0a170348b3 200 Gene3D G3DSA:1.10.357.10 1 197 6.0E-31 T 12-10-2018 Amet_1339 eab646d72a1706f15a96fe0a170348b3 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 50 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Amet_1339 eab646d72a1706f15a96fe0a170348b3 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1339 eab646d72a1706f15a96fe0a170348b3 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1339 eab646d72a1706f15a96fe0a170348b3 200 SUPERFAMILY SSF48498 88 197 2.05E-9 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_1339 eab646d72a1706f15a96fe0a170348b3 200 SUPERFAMILY SSF46689 3 64 1.08E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_1339 eab646d72a1706f15a96fe0a170348b3 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.1E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_1327 6931c11a50db27eda8f7231f3620b228 268 SUPERFAMILY SSF161098 77 259 1.13E-30 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1327 6931c11a50db27eda8f7231f3620b228 268 Gene3D G3DSA:1.10.3720.10 68 267 1.5E-28 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1327 6931c11a50db27eda8f7231f3620b228 268 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 23 267 2.0E-81 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Amet_1327 6931c11a50db27eda8f7231f3620b228 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 267 3.2E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_0358 22a36152944c749c951283e0c5f09c69 417 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 4.5E-110 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Amet_0358 22a36152944c749c951283e0c5f09c69 417 SUPERFAMILY SSF55205 3 415 2.75E-140 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Amet_0358 22a36152944c749c951283e0c5f09c69 417 Gene3D G3DSA:3.65.10.10 21 230 1.9E-170 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amet_0358 22a36152944c749c951283e0c5f09c69 417 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 45.107 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_0358 22a36152944c749c951283e0c5f09c69 417 Gene3D G3DSA:3.65.10.10 8 413 1.9E-170 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amet_0358 22a36152944c749c951283e0c5f09c69 417 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 414 3.5E-181 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_3174 51878d605914572892f203b111f7fee8 268 Gene3D G3DSA:3.40.50.10330 40 268 4.9E-70 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Amet_3174 51878d605914572892f203b111f7fee8 268 Pfam PF01513 ATP-NAD kinase 33 231 1.3E-37 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Amet_3174 51878d605914572892f203b111f7fee8 268 Hamap MF_00361 NAD kinase [nadK]. 5 268 23.743 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Amet_3174 51878d605914572892f203b111f7fee8 268 Gene3D G3DSA:2.60.200.30 107 246 4.9E-70 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Amet_3174 51878d605914572892f203b111f7fee8 268 SUPERFAMILY SSF111331 15 267 1.31E-60 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Amet_1540 569e3ed49bd8757f4222ac4a4e830441 154 Pfam PF04073 Aminoacyl-tRNA editing domain 24 139 3.1E-26 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Amet_1540 569e3ed49bd8757f4222ac4a4e830441 154 Gene3D G3DSA:3.90.960.10 1 152 1.8E-38 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amet_1540 569e3ed49bd8757f4222ac4a4e830441 154 SUPERFAMILY SSF55826 2 150 1.83E-35 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Amet_2228 c093ea4ee7fd51932b0007e406c824dd 143 SUPERFAMILY SSF55811 2 127 6.72E-13 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Amet_2228 c093ea4ee7fd51932b0007e406c824dd 143 Gene3D G3DSA:3.90.79.10 6 131 3.9E-14 T 12-10-2018 Amet_2859 a5072baf706bb25ae07e6a655a483b10 152 Pfam PF11385 Protein of unknown function (DUF3189) 2 149 1.4E-51 T 12-10-2018 IPR021525 Protein of unknown function DUF3189 Amet_4258 2a8d97c091e6d82e84d2b32834345156 243 TIGRFAM TIGR00035 asp_race: aspartate racemase 3 232 3.5E-53 T 12-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Amet_4258 2a8d97c091e6d82e84d2b32834345156 243 Gene3D G3DSA:3.40.50.1860 107 219 3.0E-68 T 12-10-2018 Amet_4258 2a8d97c091e6d82e84d2b32834345156 243 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 226 2.6E-47 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_4258 2a8d97c091e6d82e84d2b32834345156 243 SUPERFAMILY SSF53681 4 114 3.99E-27 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_4258 2a8d97c091e6d82e84d2b32834345156 243 SUPERFAMILY SSF53681 121 232 2.75E-18 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_4258 2a8d97c091e6d82e84d2b32834345156 243 Gene3D G3DSA:3.40.50.1860 6 225 3.0E-68 T 12-10-2018 Amet_2961 debc5b2baa15f84f3d419f3f67875dfb 298 Pfam PF03547 Membrane transport protein 4 138 1.3E-8 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Amet_2961 debc5b2baa15f84f3d419f3f67875dfb 298 Pfam PF03547 Membrane transport protein 160 293 9.3E-15 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Amet_1305 a05d80665561c8c40a6876a67a29cef9 289 Gene3D G3DSA:3.80.30.20 13 233 4.2E-19 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_1305 a05d80665561c8c40a6876a67a29cef9 289 Pfam PF04055 Radical SAM superfamily 20 178 2.6E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_1305 a05d80665561c8c40a6876a67a29cef9 289 SUPERFAMILY SSF102114 4 239 1.01E-38 T 12-10-2018 Amet_1305 a05d80665561c8c40a6876a67a29cef9 289 SMART SM00729 15 233 2.0E-34 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_0361 6925a8a8bf1467a1885d514f6c65e6bc 194 SUPERFAMILY SSF46689 7 73 3.96E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Amet_0361 6925a8a8bf1467a1885d514f6c65e6bc 194 Gene3D G3DSA:1.10.357.10 2 194 6.6E-26 T 12-10-2018 Amet_0361 6925a8a8bf1467a1885d514f6c65e6bc 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 59 2.4E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0361 6925a8a8bf1467a1885d514f6c65e6bc 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_0361 6925a8a8bf1467a1885d514f6c65e6bc 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.2E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Amet_2053 96a711f39d3a82549b9673635a20eca0 335 SUPERFAMILY SSF55681 4 322 1.34E-23 T 12-10-2018 Amet_2053 96a711f39d3a82549b9673635a20eca0 335 Pfam PF13393 Histidyl-tRNA synthetase 69 294 8.6E-15 T 12-10-2018 Amet_2053 96a711f39d3a82549b9673635a20eca0 335 PIRSF PIRSF001549 2 335 1.4E-22 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Amet_2053 96a711f39d3a82549b9673635a20eca0 335 Gene3D G3DSA:3.30.930.10 4 326 5.1E-27 T 12-10-2018 Amet_1213 34e0375561c64240840f508280e51f71 560 SUPERFAMILY SSF52518 181 438 6.87E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_1213 34e0375561c64240840f508280e51f71 560 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 458 551 3.5E-10 T 12-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Amet_1213 34e0375561c64240840f508280e51f71 560 Gene3D G3DSA:3.40.50.970 169 369 4.5E-74 T 12-10-2018 Amet_1213 34e0375561c64240840f508280e51f71 560 SUPERFAMILY SSF53323 1 204 2.35E-37 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_1213 34e0375561c64240840f508280e51f71 560 SUPERFAMILY SSF52922 450 552 8.32E-17 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_1213 34e0375561c64240840f508280e51f71 560 Gene3D G3DSA:3.40.50.920 445 560 3.7E-29 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Amet_1213 34e0375561c64240840f508280e51f71 560 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 193 432 4.4E-57 T 12-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Amet_1213 34e0375561c64240840f508280e51f71 560 Gene3D G3DSA:3.40.920.10 1 168 1.0E-29 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_1213 34e0375561c64240840f508280e51f71 560 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 165 6.7E-30 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amet_1213 34e0375561c64240840f508280e51f71 560 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 3 554 5.0E-206 T 12-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 Amet_3222 118d64d29185240291630a5c5db00fca 170 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 6 164 2.7E-48 T 12-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 Amet_3222 118d64d29185240291630a5c5db00fca 170 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 6 164 3.8E-44 T 12-10-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 Amet_4801 6138e38e2f79591bc9053122e6fadc95 111 SUPERFAMILY SSF54211 2 109 6.57E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Amet_4801 6138e38e2f79591bc9053122e6fadc95 111 Gene3D G3DSA:3.30.230.10 1 111 2.1E-35 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Amet_4801 6138e38e2f79591bc9053122e6fadc95 111 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 110 19.092 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Amet_4801 6138e38e2f79591bc9053122e6fadc95 111 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 109 2.3E-28 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Amet_4801 6138e38e2f79591bc9053122e6fadc95 111 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 105 6.0E-52 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Amet_4801 6138e38e2f79591bc9053122e6fadc95 111 Pfam PF00825 Ribonuclease P 1 107 1.3E-31 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 Gene3D G3DSA:3.40.50.300 1 213 1.9E-80 T 12-10-2018 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 SUPERFAMILY SSF52540 1 211 7.71E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 Hamap MF_00235 Adenylate kinase [adk]. 1 213 49.424 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 Pfam PF00406 Adenylate kinase 5 190 3.3E-58 T 12-10-2018 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 PRINTS PR00094 Adenylate kinase signature 81 97 3.0E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 PRINTS PR00094 Adenylate kinase signature 160 175 3.0E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 PRINTS PR00094 Adenylate kinase signature 32 46 3.0E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 PRINTS PR00094 Adenylate kinase signature 4 17 3.0E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 PRINTS PR00094 Adenylate kinase signature 177 191 3.0E-34 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 1.4E-80 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Amet_4457 a07f841f626e2f31b1aa3caf76713e1f 215 Pfam PF05191 Adenylate kinase, active site lid 127 162 8.9E-16 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Amet_2450 3fd349d47e6a7c13ad025863fa4b557b 266 SUPERFAMILY SSF55797 148 262 5.23E-20 T 12-10-2018 IPR035940 CAP superfamily Amet_2450 3fd349d47e6a7c13ad025863fa4b557b 266 Gene3D G3DSA:3.40.33.10 12 265 3.5E-58 T 12-10-2018 IPR035940 CAP superfamily Amet_2450 3fd349d47e6a7c13ad025863fa4b557b 266 Pfam PF00188 Cysteine-rich secretory protein family 154 261 4.7E-16 T 12-10-2018 IPR014044 CAP domain Amet_1529 88ba373ce50239b73a688fef5d7c9da8 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 116 1.2E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amet_1529 88ba373ce50239b73a688fef5d7c9da8 120 SUPERFAMILY SSF54593 1 118 6.04E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1529 88ba373ce50239b73a688fef5d7c9da8 120 Gene3D G3DSA:3.10.180.10 1 120 1.2E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_4151 e5fa52342a50c01f9ac1d7351171f550 694 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 316 340 3.8E-10 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4151 e5fa52342a50c01f9ac1d7351171f550 694 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 246 270 3.8E-10 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4151 e5fa52342a50c01f9ac1d7351171f550 694 Pfam PF00361 Proton-conducting membrane transporter 210 504 1.4E-59 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_4151 e5fa52342a50c01f9ac1d7351171f550 694 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 154 198 3.6E-7 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_1904 4ce10432641fc0e3757b56ff5cf85ea1 424 SUPERFAMILY SSF103473 1 416 1.83E-51 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_1904 4ce10432641fc0e3757b56ff5cf85ea1 424 Pfam PF07690 Major Facilitator Superfamily 18 379 5.7E-35 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_1904 4ce10432641fc0e3757b56ff5cf85ea1 424 Gene3D G3DSA:1.20.1250.20 7 415 2.1E-46 T 12-10-2018 Amet_4487 66f1e4ac94e964beec62c21889032577 120 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 54 120 2.5E-31 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4487 66f1e4ac94e964beec62c21889032577 120 Gene3D G3DSA:1.20.5.710 1 49 5.0E-19 T 12-10-2018 Amet_4487 66f1e4ac94e964beec62c21889032577 120 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 120 24.44 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4487 66f1e4ac94e964beec62c21889032577 120 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 46 3.5E-17 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4487 66f1e4ac94e964beec62c21889032577 120 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 120 2.8E-46 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4487 66f1e4ac94e964beec62c21889032577 120 SUPERFAMILY SSF48300 1 56 9.68E-15 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_4487 66f1e4ac94e964beec62c21889032577 120 Gene3D G3DSA:3.30.1390.10 50 120 1.7E-30 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Amet_4487 66f1e4ac94e964beec62c21889032577 120 SUPERFAMILY SSF54736 49 120 5.41E-25 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Amet_4487 66f1e4ac94e964beec62c21889032577 120 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 55 120 1.0E-28 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Amet_3608 bda27bb966c7530880eef449f4eefc96 314 Pfam PF04015 Domain of unknown function (DUF362) 44 246 7.8E-30 T 12-10-2018 IPR007160 Domain of unknown function DUF362 Amet_0129 38f02cdcfab059db989015ec99e3409c 122 Gene3D G3DSA:1.10.10.10 6 122 4.0E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0129 38f02cdcfab059db989015ec99e3409c 122 Pfam PF01022 Bacterial regulatory protein, arsR family 46 91 3.4E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0129 38f02cdcfab059db989015ec99e3409c 122 SUPERFAMILY SSF46785 27 118 4.74E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0129 38f02cdcfab059db989015ec99e3409c 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 4.2E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0129 38f02cdcfab059db989015ec99e3409c 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 71 4.2E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0129 38f02cdcfab059db989015ec99e3409c 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 4.2E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0129 38f02cdcfab059db989015ec99e3409c 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 88 103 4.2E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_0129 38f02cdcfab059db989015ec99e3409c 122 SMART SM00418 39 117 3.5E-31 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Amet_3686 81429a26c01ceb5c26bf6e3f1677bf52 271 SUPERFAMILY SSF54106 37 83 1.22E-11 T 12-10-2018 Amet_3686 81429a26c01ceb5c26bf6e3f1677bf52 271 Gene3D G3DSA:3.10.350.10 91 155 1.4E-19 T 12-10-2018 IPR036779 LysM domain superfamily Amet_3686 81429a26c01ceb5c26bf6e3f1677bf52 271 Gene3D G3DSA:3.10.350.10 24 90 4.3E-20 T 12-10-2018 IPR036779 LysM domain superfamily Amet_3686 81429a26c01ceb5c26bf6e3f1677bf52 271 Pfam PF01476 LysM domain 39 83 2.0E-15 T 12-10-2018 IPR018392 LysM domain Amet_3686 81429a26c01ceb5c26bf6e3f1677bf52 271 Pfam PF01476 LysM domain 102 146 3.0E-14 T 12-10-2018 IPR018392 LysM domain Amet_3686 81429a26c01ceb5c26bf6e3f1677bf52 271 SMART SM00257 101 146 2.7E-15 T 12-10-2018 IPR018392 LysM domain Amet_3686 81429a26c01ceb5c26bf6e3f1677bf52 271 SMART SM00257 38 83 2.5E-16 T 12-10-2018 IPR018392 LysM domain Amet_3686 81429a26c01ceb5c26bf6e3f1677bf52 271 SUPERFAMILY SSF54106 100 147 6.02E-12 T 12-10-2018 Amet_3711 5479b575d4fd5ad197c7c19d80114dda 704 Gene3D G3DSA:3.30.565.10 544 699 5.5E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3711 5479b575d4fd5ad197c7c19d80114dda 704 SUPERFAMILY SSF55874 550 685 6.78E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3711 5479b575d4fd5ad197c7c19d80114dda 704 SUPERFAMILY SSF47384 468 548 7.46E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_3711 5479b575d4fd5ad197c7c19d80114dda 704 SMART SM00388 481 547 2.3E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3711 5479b575d4fd5ad197c7c19d80114dda 704 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 594 685 7.5E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3711 5479b575d4fd5ad197c7c19d80114dda 704 Gene3D G3DSA:1.10.287.130 475 543 1.8E-19 T 12-10-2018 Amet_3711 5479b575d4fd5ad197c7c19d80114dda 704 SMART SM00387 593 702 3.7E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3711 5479b575d4fd5ad197c7c19d80114dda 704 Pfam PF00512 His Kinase A (phospho-acceptor) domain 481 547 7.2E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3785 717bb364f1e2244bc15ee786ecb2c618 156 Pfam PF14317 YcxB-like protein 91 149 1.5E-10 T 12-10-2018 IPR025588 YcxB-like protein Amet_4753 e4782215e83bd45fb1819823248d058c 418 Gene3D G3DSA:3.65.10.10 6 413 1.7E-163 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amet_4753 e4782215e83bd45fb1819823248d058c 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 2.3E-171 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4753 e4782215e83bd45fb1819823248d058c 418 Gene3D G3DSA:3.65.10.10 21 230 1.7E-163 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Amet_4753 e4782215e83bd45fb1819823248d058c 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 43.074 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Amet_4753 e4782215e83bd45fb1819823248d058c 418 SUPERFAMILY SSF55205 1 416 4.25E-134 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Amet_4753 e4782215e83bd45fb1819823248d058c 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 4.1E-98 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Amet_4304 a7fb5624171e244437e69bb283bc894c 248 SUPERFAMILY SSF52518 15 242 6.14E-58 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_4304 a7fb5624171e244437e69bb283bc894c 248 Gene3D G3DSA:3.40.50.970 62 244 1.1E-21 T 12-10-2018 Amet_4304 a7fb5624171e244437e69bb283bc894c 248 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 209 3.2E-22 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_0985 6c0bff4c7770bf286da60050eecb0e44 99 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 2 98 4.5E-30 T 12-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 Amet_0985 6c0bff4c7770bf286da60050eecb0e44 99 Gene3D G3DSA:3.40.30.10 1 99 6.2E-34 T 12-10-2018 Amet_1999 78bd8813fee13c2222a29cb98dce24a1 153 Gene3D G3DSA:3.40.630.30 1 144 1.9E-15 T 12-10-2018 Amet_1999 78bd8813fee13c2222a29cb98dce24a1 153 Pfam PF13673 Acetyltransferase (GNAT) domain 38 138 3.9E-6 T 12-10-2018 IPR000182 GNAT domain Amet_1999 78bd8813fee13c2222a29cb98dce24a1 153 SUPERFAMILY SSF55729 4 143 1.38E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2723 2259361e4c3e37c3b052f4de91220e4c 264 Pfam PF02108 Flagellar assembly protein FliH 127 248 1.1E-17 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Amet_2723 2259361e4c3e37c3b052f4de91220e4c 264 SUPERFAMILY SSF160527 152 255 1.44E-5 T 12-10-2018 Amet_2082 fec7e138bec71abc38f87143d00d19c8 64 Pfam PF01381 Helix-turn-helix 8 60 1.2E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2082 fec7e138bec71abc38f87143d00d19c8 64 SUPERFAMILY SSF47413 5 62 8.73E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2082 fec7e138bec71abc38f87143d00d19c8 64 Gene3D G3DSA:1.10.260.40 1 64 5.2E-25 T 12-10-2018 Amet_2082 fec7e138bec71abc38f87143d00d19c8 64 SMART SM00530 5 60 1.4E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_4201 8e0ab17a8a26327b345b67d91bd8de83 142 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 95 139 3.8E-14 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal Amet_4201 8e0ab17a8a26327b345b67d91bd8de83 142 Gene3D G3DSA:3.30.70.140 1 93 8.6E-27 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily Amet_4201 8e0ab17a8a26327b345b67d91bd8de83 142 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 4 92 7.0E-43 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal Amet_4201 8e0ab17a8a26327b345b67d91bd8de83 142 SUPERFAMILY SSF57825 96 140 2.49E-14 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily Amet_4201 8e0ab17a8a26327b345b67d91bd8de83 142 Gene3D G3DSA:2.30.30.20 94 141 6.6E-14 T 12-10-2018 Amet_4201 8e0ab17a8a26327b345b67d91bd8de83 142 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 2 91 8.7E-27 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal Amet_4201 8e0ab17a8a26327b345b67d91bd8de83 142 SUPERFAMILY SSF54893 1 93 4.71E-28 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily Amet_3466 dc69118198070e7c2e7c15ab38b48661 144 PIRSF PIRSF005900 1 144 7.2E-35 T 12-10-2018 IPR002177 DNA-binding protein Dps Amet_3466 dc69118198070e7c2e7c15ab38b48661 144 SUPERFAMILY SSF47240 4 143 2.01E-34 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_3466 dc69118198070e7c2e7c15ab38b48661 144 Pfam PF00210 Ferritin-like domain 6 143 1.2E-20 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Amet_3466 dc69118198070e7c2e7c15ab38b48661 144 Gene3D G3DSA:1.20.1260.10 2 143 3.2E-45 T 12-10-2018 IPR012347 Ferritin-like Amet_3466 dc69118198070e7c2e7c15ab38b48661 144 ProSitePatterns PS00818 Dps protein family signature 1. 25 41 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 Gene3D G3DSA:3.30.420.40 246 487 1.0E-80 T 12-10-2018 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 PIRSF PIRSF000538 1 490 6.5E-175 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 129 141 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 350 370 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 SUPERFAMILY SSF53067 2 246 1.51E-81 T 12-10-2018 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 Gene3D G3DSA:3.30.420.40 2 244 1.8E-89 T 12-10-2018 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 244 4.3E-83 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 SUPERFAMILY SSF53067 246 485 2.42E-65 T 12-10-2018 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 TIGRFAM TIGR01312 XylB: xylulokinase 4 479 3.8E-185 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 Amet_0591 ed947cc91748195ef9721d7c481dd6cd 490 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 255 437 1.2E-36 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Amet_1235 852778530e84c775416e35c554763789 157 Gene3D G3DSA:3.40.630.30 41 147 1.8E-11 T 12-10-2018 Amet_1235 852778530e84c775416e35c554763789 157 SUPERFAMILY SSF55729 12 143 1.12E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1235 852778530e84c775416e35c554763789 157 Pfam PF00583 Acetyltransferase (GNAT) family 37 132 8.6E-7 T 12-10-2018 IPR000182 GNAT domain Amet_4770 627c95fa0caa02795b7f5bf54a3541a0 670 Pfam PF02272 DHHA1 domain 534 660 1.7E-11 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Amet_4770 627c95fa0caa02795b7f5bf54a3541a0 670 SUPERFAMILY SSF64182 353 658 1.83E-60 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily Amet_4770 627c95fa0caa02795b7f5bf54a3541a0 670 Gene3D G3DSA:3.90.1640.10 337 552 9.2E-55 T 12-10-2018 Amet_4770 627c95fa0caa02795b7f5bf54a3541a0 670 Pfam PF01368 DHH family 354 509 4.1E-20 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_4770 627c95fa0caa02795b7f5bf54a3541a0 670 PIRSF PIRSF026583 4 670 1.5E-218 T 12-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA Amet_4770 627c95fa0caa02795b7f5bf54a3541a0 670 Gene3D G3DSA:3.10.310.30 553 667 6.4E-10 T 12-10-2018 Amet_4770 627c95fa0caa02795b7f5bf54a3541a0 670 Gene3D G3DSA:3.30.450.20 55 161 6.3E-13 T 12-10-2018 Amet_0174 55c4316b3fb5d6a104c38a60c2ba8e8a 140 SUPERFAMILY SSF47413 3 67 2.67E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0174 55c4316b3fb5d6a104c38a60c2ba8e8a 140 SMART SM00530 7 62 2.3E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0174 55c4316b3fb5d6a104c38a60c2ba8e8a 140 Gene3D G3DSA:1.10.260.40 1 66 1.9E-15 T 12-10-2018 Amet_0174 55c4316b3fb5d6a104c38a60c2ba8e8a 140 Pfam PF12844 Helix-turn-helix domain 5 67 2.1E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0373 84408d33851290165a8ac26c2f7aeac8 279 SUPERFAMILY SSF143422 3 126 3.79E-22 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0373 84408d33851290165a8ac26c2f7aeac8 279 Pfam PF01797 Transposase IS200 like 11 122 3.8E-13 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_0373 84408d33851290165a8ac26c2f7aeac8 279 Gene3D G3DSA:3.30.70.1290 1 167 7.3E-38 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0373 84408d33851290165a8ac26c2f7aeac8 279 SMART SM01321 9 123 1.3E-32 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_3674 d9eb788f05d0337bdeb75206a117a4a7 171 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 70 5.7E-16 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amet_3674 d9eb788f05d0337bdeb75206a117a4a7 171 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 12 164 6.0E-34 T 12-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Amet_3674 d9eb788f05d0337bdeb75206a117a4a7 171 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Amet_3674 d9eb788f05d0337bdeb75206a117a4a7 171 Gene3D G3DSA:1.20.120.1760 3 170 1.7E-14 T 12-10-2018 Amet_1711 fc5a523ed3a0483109dc42a35324489a 325 SUPERFAMILY SSF88713 97 307 1.09E-51 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amet_1711 fc5a523ed3a0483109dc42a35324489a 325 Gene3D G3DSA:3.20.20.370 65 315 5.4E-60 T 12-10-2018 Amet_1711 fc5a523ed3a0483109dc42a35324489a 325 Pfam PF01522 Polysaccharide deacetylase 102 211 2.1E-25 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Amet_2355 ef236cf638e3a7978ade3fde8d9bae3a 206 Pfam PF00753 Metallo-beta-lactamase superfamily 9 189 6.5E-33 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_2355 ef236cf638e3a7978ade3fde8d9bae3a 206 SUPERFAMILY SSF56281 7 205 8.26E-59 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_2355 ef236cf638e3a7978ade3fde8d9bae3a 206 SMART SM00849 12 189 6.1E-45 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_2355 ef236cf638e3a7978ade3fde8d9bae3a 206 Gene3D G3DSA:3.60.15.10 1 206 1.3E-70 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_0775 083170005c1031d9effdf8da776554be 182 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 178 3.9E-44 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Amet_0775 083170005c1031d9effdf8da776554be 182 Pfam PF02834 LigT like Phosphoesterase 7 87 7.1E-13 T 12-10-2018 IPR014051 Phosphoesterase, HXTX Amet_0775 083170005c1031d9effdf8da776554be 182 Pfam PF02834 LigT like Phosphoesterase 96 172 7.4E-7 T 12-10-2018 IPR014051 Phosphoesterase, HXTX Amet_0775 083170005c1031d9effdf8da776554be 182 Gene3D G3DSA:3.90.1140.10 1 181 8.3E-43 T 12-10-2018 Amet_0775 083170005c1031d9effdf8da776554be 182 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 180 22.707 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Amet_0775 083170005c1031d9effdf8da776554be 182 SUPERFAMILY SSF55144 1 180 8.02E-33 T 12-10-2018 IPR009097 Cyclic phosphodiesterase Amet_0295 057c4329a4b548cf49b1eec09dcfde60 309 Gene3D G3DSA:3.90.550.10 1 292 6.9E-97 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_0295 057c4329a4b548cf49b1eec09dcfde60 309 SUPERFAMILY SSF53448 1 268 5.42E-72 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_0295 057c4329a4b548cf49b1eec09dcfde60 309 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 3.8E-126 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Amet_0295 057c4329a4b548cf49b1eec09dcfde60 309 Pfam PF00483 Nucleotidyl transferase 6 266 8.9E-33 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Amet_3081 0e6a74af5aefcaeeda2f74f7c4787873 243 SUPERFAMILY SSF55021 146 228 1.03E-5 T 12-10-2018 Amet_3081 0e6a74af5aefcaeeda2f74f7c4787873 243 PRINTS PR01837 MgtC/SapB protein signature 33 51 1.6E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_3081 0e6a74af5aefcaeeda2f74f7c4787873 243 PRINTS PR01837 MgtC/SapB protein signature 14 33 1.6E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_3081 0e6a74af5aefcaeeda2f74f7c4787873 243 PRINTS PR01837 MgtC/SapB protein signature 66 88 1.6E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_3081 0e6a74af5aefcaeeda2f74f7c4787873 243 PRINTS PR01837 MgtC/SapB protein signature 93 117 1.6E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_3081 0e6a74af5aefcaeeda2f74f7c4787873 243 Pfam PF02308 MgtC family 11 139 2.1E-37 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_3081 0e6a74af5aefcaeeda2f74f7c4787873 243 Gene3D G3DSA:3.30.70.260 147 189 4.1E-5 T 12-10-2018 Amet_3326 9180410ae6feb1df20ff36903f3c92d0 202 SUPERFAMILY SSF53271 1 184 3.55E-42 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like Amet_3326 9180410ae6feb1df20ff36903f3c92d0 202 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 188 7.5E-67 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 Amet_3326 9180410ae6feb1df20ff36903f3c92d0 202 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 38.61 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 Amet_3326 9180410ae6feb1df20ff36903f3c92d0 202 Gene3D G3DSA:3.40.50.2020 3 188 1.0E-47 T 12-10-2018 Amet_3326 9180410ae6feb1df20ff36903f3c92d0 202 Pfam PF00156 Phosphoribosyl transferase domain 36 157 1.3E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Amet_1212 82031a9f25be65b3f7e7fa0e4a170680 285 SUPERFAMILY SSF52518 13 277 2.36E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold Amet_1212 82031a9f25be65b3f7e7fa0e4a170680 285 Gene3D G3DSA:3.40.50.970 23 232 2.6E-24 T 12-10-2018 Amet_1212 82031a9f25be65b3f7e7fa0e4a170680 285 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 195 2.5E-29 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Amet_1212 82031a9f25be65b3f7e7fa0e4a170680 285 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 199 262 5.4E-27 T 12-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal Amet_1212 82031a9f25be65b3f7e7fa0e4a170680 285 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 14 270 3.4E-113 T 12-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate Amet_0704 fa0656187af19925e0cdd564e0386d91 539 SUPERFAMILY SSF55890 339 424 4.05E-10 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Amet_0704 fa0656187af19925e0cdd564e0386d91 539 Pfam PF14501 GHKL domain 434 533 6.5E-12 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Amet_0704 fa0656187af19925e0cdd564e0386d91 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 340 381 1.2E-10 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain Amet_0704 fa0656187af19925e0cdd564e0386d91 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 499 1.6E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0704 fa0656187af19925e0cdd564e0386d91 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 518 1.6E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0704 fa0656187af19925e0cdd564e0386d91 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 536 1.6E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_0704 fa0656187af19925e0cdd564e0386d91 539 SUPERFAMILY SSF55874 402 535 6.16E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0704 fa0656187af19925e0cdd564e0386d91 539 Gene3D G3DSA:3.30.565.10 388 537 9.8E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0704 fa0656187af19925e0cdd564e0386d91 539 SMART SM00387 430 539 1.2E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_4195 aed834d6d9d0a7b5f7117478cc81230c 429 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 413 5.2E-124 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 Amet_4195 aed834d6d9d0a7b5f7117478cc81230c 429 Pfam PF02378 Phosphotransferase system, EIIC 29 345 2.9E-54 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Amet_4195 aed834d6d9d0a7b5f7117478cc81230c 429 PIRSF PIRSF006351 1 426 4.2E-133 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 Amet_1595 40e2ce12d931e613bcca3d69788326dd 521 Pfam PF00589 Phage integrase family 194 375 1.0E-15 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_1595 40e2ce12d931e613bcca3d69788326dd 521 SUPERFAMILY SSF56349 187 385 2.94E-22 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_1595 40e2ce12d931e613bcca3d69788326dd 521 Gene3D G3DSA:1.10.443.10 194 395 5.8E-20 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_0265 471dde7b7b7124769e4bb025e4181fbf 94 Gene3D G3DSA:2.40.50.220 1 94 3.9E-33 T 12-10-2018 IPR036677 EutN/Ccml superfamily Amet_0265 471dde7b7b7124769e4bb025e4181fbf 94 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 83 3.0E-33 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Amet_0265 471dde7b7b7124769e4bb025e4181fbf 94 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 2 83 7.2E-31 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Amet_0265 471dde7b7b7124769e4bb025e4181fbf 94 SUPERFAMILY SSF159133 2 87 1.96E-29 T 12-10-2018 IPR036677 EutN/Ccml superfamily Amet_2919 7526eaff456bff89193df0697d5e5894 426 Pfam PF05140 ResB-like family 13 261 3.8E-40 T 12-10-2018 IPR007816 ResB-like domain Amet_3992 dea336cba07a62b3d1c29c2eed401711 319 Pfam PF06970 Replication initiator protein A (RepA) N-terminus 18 92 7.7E-34 T 12-10-2018 IPR010724 Replication initiator A, N-terminal Amet_3749 77e3273e97d25a0a19d22d1d503f536f 265 SUPERFAMILY SSF52402 1 259 3.77E-73 T 12-10-2018 Amet_3749 77e3273e97d25a0a19d22d1d503f536f 265 PIRSF PIRSF000090 1 265 9.6E-82 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Amet_3749 77e3273e97d25a0a19d22d1d503f536f 265 SMART SM00893 22 213 1.5E-60 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_3749 77e3273e97d25a0a19d22d1d503f536f 265 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 157 177 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Amet_3749 77e3273e97d25a0a19d22d1d503f536f 265 Pfam PF01012 Electron transfer flavoprotein domain 23 199 2.0E-49 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_3749 77e3273e97d25a0a19d22d1d503f536f 265 Gene3D G3DSA:3.40.50.620 1 265 3.3E-89 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_2760 d900b4cbeb04c287fb3daaad60f551b6 193 Pfam PF03061 Thioesterase superfamily 133 177 5.4E-6 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Amet_2760 d900b4cbeb04c287fb3daaad60f551b6 193 Pfam PF08220 DeoR-like helix-turn-helix domain 18 51 9.3E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Amet_2760 d900b4cbeb04c287fb3daaad60f551b6 193 PIRSF PIRSF037733 10 193 1.2E-77 T 12-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 Amet_2760 d900b4cbeb04c287fb3daaad60f551b6 193 Gene3D G3DSA:3.10.129.10 86 193 4.1E-37 T 12-10-2018 Amet_2760 d900b4cbeb04c287fb3daaad60f551b6 193 Gene3D G3DSA:1.10.10.10 6 70 3.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2760 d900b4cbeb04c287fb3daaad60f551b6 193 SUPERFAMILY SSF54637 83 189 1.2E-22 T 12-10-2018 IPR029069 HotDog domain superfamily Amet_1851 7fc074eabbfb182b7c1a9d263dc4090a 170 Gene3D G3DSA:1.10.1740.10 1 96 6.7E-18 T 12-10-2018 Amet_1851 7fc074eabbfb182b7c1a9d263dc4090a 170 SUPERFAMILY SSF88946 1 78 9.42E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1851 7fc074eabbfb182b7c1a9d263dc4090a 170 Pfam PF08281 Sigma-70, region 4 98 151 7.6E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Amet_1851 7fc074eabbfb182b7c1a9d263dc4090a 170 Pfam PF04542 Sigma-70 region 2 1 68 8.8E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_1851 7fc074eabbfb182b7c1a9d263dc4090a 170 Gene3D G3DSA:1.10.10.10 97 159 4.5E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1851 7fc074eabbfb182b7c1a9d263dc4090a 170 SUPERFAMILY SSF88659 90 155 1.18E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_1851 7fc074eabbfb182b7c1a9d263dc4090a 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 1 151 2.2E-29 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_1453 2c503e9bb80a55921ce0387d5b3ac3b7 198 SUPERFAMILY SSF52317 7 195 1.68E-52 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_1453 2c503e9bb80a55921ce0387d5b3ac3b7 198 Gene3D G3DSA:3.40.50.880 1 197 1.4E-68 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_1453 2c503e9bb80a55921ce0387d5b3ac3b7 198 Pfam PF01965 DJ-1/PfpI family 7 177 1.0E-28 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amet_0487 334e7a612c68484b67c069111d65b222 314 Gene3D G3DSA:3.30.1330.60 141 296 6.2E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily Amet_0487 334e7a612c68484b67c069111d65b222 314 SUPERFAMILY SSF103088 164 289 4.45E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily Amet_0487 334e7a612c68484b67c069111d65b222 314 Pfam PF00691 OmpA family 176 283 5.9E-16 T 12-10-2018 IPR006665 OmpA-like domain Amet_4239 70ce9171dcaca4aa54653178677f5b94 214 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 4 47 4.0E-8 T 12-10-2018 IPR020137 Uncharacterised protein family HI1736 Amet_4239 70ce9171dcaca4aa54653178677f5b94 214 SUPERFAMILY SSF55729 117 203 4.75E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_4239 70ce9171dcaca4aa54653178677f5b94 214 Pfam PF10688 Bacterial inner membrane protein 2 72 8.4E-8 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV Amet_4519 ff7dfeab2b91caccdd30c1dcda003b80 426 Gene3D G3DSA:1.10.3080.10 12 423 1.0E-74 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Amet_4519 ff7dfeab2b91caccdd30c1dcda003b80 426 SUPERFAMILY SSF81340 6 402 9.81E-72 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Amet_4519 ff7dfeab2b91caccdd30c1dcda003b80 426 Pfam PF00654 Voltage gated chloride channel 55 394 1.7E-64 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Amet_4519 ff7dfeab2b91caccdd30c1dcda003b80 426 PRINTS PR00762 Chloride channel signature 152 171 1.1E-6 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Amet_4519 ff7dfeab2b91caccdd30c1dcda003b80 426 PRINTS PR00762 Chloride channel signature 346 362 1.1E-6 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Amet_4519 ff7dfeab2b91caccdd30c1dcda003b80 426 PRINTS PR00762 Chloride channel signature 97 116 1.1E-6 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Amet_0029 a70cf17d37f87242047f6d62edf10ecc 294 Gene3D G3DSA:2.30.30.60 139 188 2.3E-21 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Amet_0029 a70cf17d37f87242047f6d62edf10ecc 294 SUPERFAMILY SSF82861 32 122 2.62E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Amet_0029 a70cf17d37f87242047f6d62edf10ecc 294 SUPERFAMILY SSF82689 188 289 1.18E-19 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Amet_0029 a70cf17d37f87242047f6d62edf10ecc 294 Pfam PF00924 Mechanosensitive ion channel 81 278 7.9E-45 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Amet_0029 a70cf17d37f87242047f6d62edf10ecc 294 SUPERFAMILY SSF50182 124 184 2.58E-14 T 12-10-2018 IPR010920 LSM domain superfamily Amet_0029 a70cf17d37f87242047f6d62edf10ecc 294 Gene3D G3DSA:3.30.70.100 189 276 6.8E-27 T 12-10-2018 Amet_0178 ebc12f693ce112ef6952b7ec4cdb09de 188 Pfam PF00395 S-layer homology domain 82 123 1.6E-13 T 12-10-2018 IPR001119 S-layer homology domain Amet_0178 ebc12f693ce112ef6952b7ec4cdb09de 188 Pfam PF00395 S-layer homology domain 35 60 1.2E-5 T 12-10-2018 IPR001119 S-layer homology domain Amet_0525 3802ee61f19fa0a7d7afa16be59d2bea 270 Pfam PF00005 ABC transporter 21 165 5.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0525 3802ee61f19fa0a7d7afa16be59d2bea 270 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 13 200 2.5E-68 T 12-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 Amet_0525 3802ee61f19fa0a7d7afa16be59d2bea 270 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_0525 3802ee61f19fa0a7d7afa16be59d2bea 270 SMART SM00382 29 214 5.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0525 3802ee61f19fa0a7d7afa16be59d2bea 270 Gene3D G3DSA:3.40.50.300 2 260 6.6E-67 T 12-10-2018 Amet_0525 3802ee61f19fa0a7d7afa16be59d2bea 270 SUPERFAMILY SSF52540 4 224 3.25E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3424 f192b198fbd7c76d770bceb9ed96902e 466 SUPERFAMILY SSF56059 188 429 2.07E-7 T 12-10-2018 Amet_3424 f192b198fbd7c76d770bceb9ed96902e 466 Pfam PF14398 YheC/D like ATP-grasp 182 459 2.4E-53 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D Amet_1219 85901210ccbc192e03554ead0a82938e 106 Gene3D G3DSA:2.20.25.270 13 74 5.0E-11 T 12-10-2018 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 Gene3D G3DSA:3.30.860.10 1 93 1.9E-39 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 PIRSF PIRSF002144 1 93 2.9E-33 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 5.5E-45 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 Pfam PF00203 Ribosomal protein S19 3 83 8.1E-35 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 SUPERFAMILY SSF54570 2 84 1.14E-34 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.9E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.9E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.9E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.297 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4474 f7c31d158b2fa74e86d55b707d8eaf4d 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_2092 b49ccd19d4ab45474a0dc11c23484b7c 269 Gene3D G3DSA:3.20.20.20 1 269 9.0E-98 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2092 b49ccd19d4ab45474a0dc11c23484b7c 269 Pfam PF00809 Pterin binding enzyme 6 226 5.5E-24 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2092 b49ccd19d4ab45474a0dc11c23484b7c 269 SUPERFAMILY SSF51717 1 260 1.24E-78 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2923 8ce128a3ec3a3d05b3bb9753c80d7e87 585 Pfam PF13687 Domain of unknown function (DUF4153) 158 379 2.1E-67 T 12-10-2018 IPR025291 Protein of unknown function DUF4153 Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 1.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 1.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 1.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 1.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 SUPERFAMILY SSF55874 292 450 6.02E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 298 6.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 SUPERFAMILY SSF47384 231 300 2.75E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 Gene3D G3DSA:1.10.287.130 221 297 1.5E-22 T 12-10-2018 Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 Gene3D G3DSA:3.30.565.10 298 449 2.0E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 SMART SM00387 344 451 1.6E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 Gene3D G3DSA:3.30.450.20 104 220 8.2E-9 T 12-10-2018 Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 449 1.0E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3256 b49eb38c872aa37e97c203aff27e5229 458 SMART SM00388 237 302 2.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_1464 05f2c02d4c7098e22d34232a2cd511ec 122 Gene3D G3DSA:3.30.420.130 1 112 2.3E-29 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Amet_1464 05f2c02d4c7098e22d34232a2cd511ec 122 SUPERFAMILY SSF53146 1 121 2.75E-27 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Amet_1464 05f2c02d4c7098e22d34232a2cd511ec 122 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 13 102 1.2E-22 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Amet_1955 79db50950440354fb237e49e09cab100 367 PIRSF PIRSF029215 3 367 1.7E-50 T 12-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 Amet_1955 79db50950440354fb237e49e09cab100 367 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 16 167 7.4E-34 T 12-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 Amet_4363 79db50950440354fb237e49e09cab100 367 PIRSF PIRSF029215 3 367 1.7E-50 T 12-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 Amet_4363 79db50950440354fb237e49e09cab100 367 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 16 167 7.4E-34 T 12-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 Amet_0418 79db50950440354fb237e49e09cab100 367 PIRSF PIRSF029215 3 367 1.7E-50 T 12-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 Amet_0418 79db50950440354fb237e49e09cab100 367 Pfam PF09979 Uncharacterized protein conserved in bacteria (DUF2213) 16 167 7.4E-34 T 12-10-2018 IPR016913 Uncharacterised conserved protein UCP029215 Amet_3343 f788ebca84b1be56d2c51a36aabe4bb6 313 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 32 277 6.0E-143 T 12-10-2018 Amet_3343 f788ebca84b1be56d2c51a36aabe4bb6 313 Pfam PF14045 YIEGIA protein 15 297 6.2E-102 T 12-10-2018 IPR025918 YIEGIA protein Amet_4454 690775a27fd549a02b8fb3a15547f582 72 Gene3D G3DSA:2.40.50.140 2 71 1.1E-36 T 12-10-2018 Amet_4454 690775a27fd549a02b8fb3a15547f582 72 SUPERFAMILY SSF50249 1 70 8.57E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_4454 690775a27fd549a02b8fb3a15547f582 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.0E-27 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Amet_4454 690775a27fd549a02b8fb3a15547f582 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.481 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Amet_4454 690775a27fd549a02b8fb3a15547f582 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.5E-36 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Amet_4454 690775a27fd549a02b8fb3a15547f582 72 SMART SM00316 4 72 4.1E-5 T 12-10-2018 IPR022967 RNA-binding domain, S1 Amet_3133 f946ee96220008971e02f5462e17742e 131 SMART SM00530 39 94 4.3E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_3133 f946ee96220008971e02f5462e17742e 131 Gene3D G3DSA:1.10.260.40 31 108 3.2E-16 T 12-10-2018 Amet_3133 f946ee96220008971e02f5462e17742e 131 Pfam PF01381 Helix-turn-helix 42 90 2.3E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_3133 f946ee96220008971e02f5462e17742e 131 SUPERFAMILY SSF47413 32 97 3.49E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_3001 4e7dcf66e8c42ee65bc34c04d7299091 231 Gene3D G3DSA:3.40.50.2300 1 126 3.1E-30 T 12-10-2018 Amet_3001 4e7dcf66e8c42ee65bc34c04d7299091 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 3.6E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3001 4e7dcf66e8c42ee65bc34c04d7299091 231 Gene3D G3DSA:1.10.10.10 127 230 7.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3001 4e7dcf66e8c42ee65bc34c04d7299091 231 SUPERFAMILY SSF52172 1 169 2.49E-33 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3001 4e7dcf66e8c42ee65bc34c04d7299091 231 SMART SM00862 148 224 1.2E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_3001 4e7dcf66e8c42ee65bc34c04d7299091 231 SMART SM00448 2 112 9.8E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3001 4e7dcf66e8c42ee65bc34c04d7299091 231 Pfam PF00072 Response regulator receiver domain 4 112 6.9E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3212 6dbb420cdf38f96f529793a3dd572dd6 488 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 27 478 2.6E-154 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_3212 6dbb420cdf38f96f529793a3dd572dd6 488 PIRSF PIRSF005690 5 488 3.4E-136 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_2482 3a4bedb4bad6f0c00a80013627eef222 167 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 27 137 3.3E-19 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Amet_2482 3a4bedb4bad6f0c00a80013627eef222 167 Pfam PF08282 haloacid dehalogenase-like hydrolase 29 83 3.2E-5 T 12-10-2018 Amet_2482 3a4bedb4bad6f0c00a80013627eef222 167 SUPERFAMILY SSF56784 8 136 1.03E-23 T 12-10-2018 IPR036412 HAD-like superfamily Amet_2482 3a4bedb4bad6f0c00a80013627eef222 167 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 3 163 3.2E-45 T 12-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like Amet_2482 3a4bedb4bad6f0c00a80013627eef222 167 Pfam PF13242 HAD-hyrolase-like 90 135 7.5E-10 T 12-10-2018 Amet_2482 3a4bedb4bad6f0c00a80013627eef222 167 Gene3D G3DSA:3.40.50.1000 18 158 2.6E-21 T 12-10-2018 IPR023214 HAD superfamily Amet_4177 e272c7dc45dec1222fc9c79c2a7161d4 408 Pfam PF13487 HD domain 244 306 6.0E-12 T 12-10-2018 Amet_4177 e272c7dc45dec1222fc9c79c2a7161d4 408 Gene3D G3DSA:1.10.3210.10 176 360 8.5E-27 T 12-10-2018 Amet_4177 e272c7dc45dec1222fc9c79c2a7161d4 408 SUPERFAMILY SSF109604 192 352 1.44E-7 T 12-10-2018 Amet_3211 2aad551d35eb062f56c940ced3bd7d14 386 Gene3D G3DSA:1.20.1270.370 20 219 3.7E-40 T 12-10-2018 Amet_3211 2aad551d35eb062f56c940ced3bd7d14 386 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 35 380 2.4E-84 T 12-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit Amet_3211 2aad551d35eb062f56c940ced3bd7d14 386 Gene3D G3DSA:3.40.50.11890 28 154 3.7E-40 T 12-10-2018 Amet_3211 2aad551d35eb062f56c940ced3bd7d14 386 Gene3D G3DSA:3.40.50.11900 237 384 5.2E-41 T 12-10-2018 Amet_2784 ba43d61ca07e6738f3ef268d67938791 257 Pfam PF01976 Protein of unknown function DUF116 98 251 2.9E-53 T 12-10-2018 IPR002829 Protein of unknown function DUF116 Amet_2784 ba43d61ca07e6738f3ef268d67938791 257 PIRSF PIRSF006594 13 257 1.8E-50 T 12-10-2018 IPR002829 Protein of unknown function DUF116 Amet_1164 0818330998f484bed0efc31ba77d2bf5 336 Gene3D G3DSA:3.40.190.10 69 298 9.2E-71 T 12-10-2018 Amet_1164 0818330998f484bed0efc31ba77d2bf5 336 Gene3D G3DSA:3.40.190.10 153 268 9.2E-71 T 12-10-2018 Amet_1164 0818330998f484bed0efc31ba77d2bf5 336 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 25 293 2.1E-73 T 12-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 Amet_1164 0818330998f484bed0efc31ba77d2bf5 336 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 69 306 2.8E-66 T 12-10-2018 Amet_1164 0818330998f484bed0efc31ba77d2bf5 336 SUPERFAMILY SSF53850 64 333 5.69E-45 T 12-10-2018 Amet_1099 4cb9c10f09cd2be389a3921951d1535a 232 SUPERFAMILY SSF46894 137 228 7.37E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_1099 4cb9c10f09cd2be389a3921951d1535a 232 Pfam PF00072 Response regulator receiver domain 8 117 3.0E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1099 4cb9c10f09cd2be389a3921951d1535a 232 SUPERFAMILY SSF52172 3 124 1.99E-40 T 12-10-2018 IPR011006 CheY-like superfamily Amet_1099 4cb9c10f09cd2be389a3921951d1535a 232 Gene3D G3DSA:1.10.10.10 130 232 1.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1099 4cb9c10f09cd2be389a3921951d1535a 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 4.1E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_1099 4cb9c10f09cd2be389a3921951d1535a 232 Gene3D G3DSA:3.40.50.2300 1 129 9.2E-39 T 12-10-2018 Amet_1099 4cb9c10f09cd2be389a3921951d1535a 232 SMART SM00448 6 116 1.5E-42 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_1099 4cb9c10f09cd2be389a3921951d1535a 232 SMART SM00862 153 227 3.6E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Amet_0504 f7ddc5803e9a4fe800a1180c4ac7ed04 386 Gene3D G3DSA:3.90.1150.10 27 373 3.4E-111 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0504 f7ddc5803e9a4fe800a1180c4ac7ed04 386 Gene3D G3DSA:3.40.640.10 47 283 3.4E-111 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0504 f7ddc5803e9a4fe800a1180c4ac7ed04 386 SUPERFAMILY SSF53383 1 376 2.5E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_0504 f7ddc5803e9a4fe800a1180c4ac7ed04 386 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Amet_0504 f7ddc5803e9a4fe800a1180c4ac7ed04 386 Pfam PF00155 Aminotransferase class I and II 28 370 1.3E-58 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Amet_1527 19b626807ec92f2743f1196d259b90b6 444 SUPERFAMILY SSF53098 89 402 9.1E-12 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1527 19b626807ec92f2743f1196d259b90b6 444 Pfam PF13546 DDE superfamily endonuclease 66 251 1.2E-12 T 12-10-2018 IPR038721 Transposase IS701-like, DDE domain Amet_2005 249b995e4cd2943c0479fba46397fbd6 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 306 2.1E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_2005 249b995e4cd2943c0479fba46397fbd6 318 SUPERFAMILY SSF161098 98 292 9.42E-22 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2005 249b995e4cd2943c0479fba46397fbd6 318 Gene3D G3DSA:1.10.3720.10 90 303 6.5E-25 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4446 efa8af0d86f91a776ac987954feafaae 287 SUPERFAMILY SSF52540 3 236 3.19E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4446 efa8af0d86f91a776ac987954feafaae 287 Gene3D G3DSA:3.40.50.300 1 287 4.0E-83 T 12-10-2018 Amet_4446 efa8af0d86f91a776ac987954feafaae 287 Pfam PF00005 ABC transporter 23 173 3.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4446 efa8af0d86f91a776ac987954feafaae 287 SMART SM00382 32 222 1.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4446 efa8af0d86f91a776ac987954feafaae 287 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4446 efa8af0d86f91a776ac987954feafaae 287 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 278 9.8E-124 T 12-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 Amet_3655 1423ec7c3ed871fe08f321018e784d3c 75 Pfam PF11007 Spore coat associated protein JA (CotJA) 31 64 1.9E-15 T 12-10-2018 IPR020256 Spore coat protein CotJA Amet_4633 a21788ec7896dd25dfe14fddc336c556 237 Pfam PF04239 Protein of unknown function (DUF421) 89 163 2.4E-22 T 12-10-2018 IPR007353 Protein of unknown function DUF421 Amet_4633 a21788ec7896dd25dfe14fddc336c556 237 Gene3D G3DSA:3.30.240.20 81 154 1.2E-21 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Amet_4633 a21788ec7896dd25dfe14fddc336c556 237 Gene3D G3DSA:3.30.240.20 170 229 2.0E-12 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Amet_1003 d1f27fdbd2015ffaf591cd9e8ec7838a 66 Pfam PF12728 Helix-turn-helix domain 12 61 6.3E-19 T 12-10-2018 Amet_1003 d1f27fdbd2015ffaf591cd9e8ec7838a 66 SUPERFAMILY SSF46955 11 61 1.14E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_1003 d1f27fdbd2015ffaf591cd9e8ec7838a 66 Gene3D G3DSA:1.10.1660.10 9 60 1.0E-8 T 12-10-2018 Amet_1003 d1f27fdbd2015ffaf591cd9e8ec7838a 66 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 12 59 2.6E-17 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 8 504 1.7E-107 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 PIRSF PIRSF002869 2 512 1.9E-129 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 PRINTS PR01806 Virulence factor MviN signature 134 158 3.7E-26 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 PRINTS PR01806 Virulence factor MviN signature 158 179 3.7E-26 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 PRINTS PR01806 Virulence factor MviN signature 258 284 3.7E-26 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 PRINTS PR01806 Virulence factor MviN signature 356 375 3.7E-26 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 PRINTS PR01806 Virulence factor MviN signature 408 425 3.7E-26 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 PRINTS PR01806 Virulence factor MviN signature 37 56 3.7E-26 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 7 465 17.111 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_0214 02d60930c211dbb0126f27dcf1deeb88 521 Pfam PF03023 MviN-like protein 32 464 1.3E-90 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Amet_1073 47b3924fd5b62e9a2b151274a5c0199d 208 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 24 186 2.6E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Amet_1073 47b3924fd5b62e9a2b151274a5c0199d 208 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 28.067 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Amet_1073 47b3924fd5b62e9a2b151274a5c0199d 208 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 189 1.1E-71 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Amet_1073 47b3924fd5b62e9a2b151274a5c0199d 208 Pfam PF01926 50S ribosome-binding GTPase 25 143 1.1E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 Amet_1073 47b3924fd5b62e9a2b151274a5c0199d 208 Gene3D G3DSA:3.40.50.300 1 198 1.3E-54 T 12-10-2018 Amet_1073 47b3924fd5b62e9a2b151274a5c0199d 208 SUPERFAMILY SSF52540 17 197 3.85E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0907 d07000315304d7748ba4e1ad0a5fdf38 364 Gene3D G3DSA:1.10.1060.10 272 363 4.7E-11 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_0907 d07000315304d7748ba4e1ad0a5fdf38 364 Pfam PF13534 4Fe-4S dicluster domain 281 351 7.5E-7 T 12-10-2018 Amet_0907 d07000315304d7748ba4e1ad0a5fdf38 364 SUPERFAMILY SSF46548 278 359 2.67E-8 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_0907 d07000315304d7748ba4e1ad0a5fdf38 364 Gene3D G3DSA:3.20.20.100 1 271 2.4E-49 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amet_0907 d07000315304d7748ba4e1ad0a5fdf38 364 Pfam PF00248 Aldo/keto reductase family 16 272 9.4E-24 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain Amet_0907 d07000315304d7748ba4e1ad0a5fdf38 364 SUPERFAMILY SSF51430 2 300 3.4E-46 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Amet_3799 cd383ac0d3474438a826863627a10359 365 Gene3D G3DSA:3.40.50.2300 42 340 2.2E-128 T 12-10-2018 Amet_3799 cd383ac0d3474438a826863627a10359 365 Gene3D G3DSA:3.40.50.2300 144 360 2.2E-128 T 12-10-2018 Amet_3799 cd383ac0d3474438a826863627a10359 365 SUPERFAMILY SSF53822 40 353 1.04E-64 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_3799 cd383ac0d3474438a826863627a10359 365 Pfam PF13407 Periplasmic binding protein domain 42 318 3.1E-61 T 12-10-2018 IPR025997 Periplasmic binding protein Amet_0730 3b65b96103e96ba46d98d57888e54e56 162 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 142 26.523 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Amet_0730 3b65b96103e96ba46d98d57888e54e56 162 Gene3D G3DSA:2.30.290.10 1 151 5.3E-55 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Amet_0730 3b65b96103e96ba46d98d57888e54e56 162 SUPERFAMILY SSF141457 1 146 4.71E-51 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Amet_0730 3b65b96103e96ba46d98d57888e54e56 162 Pfam PF02623 FliW protein 19 139 1.8E-42 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Amet_0124 f5bd50c055b8ed345738298ae6e3d130 206 SMART SM00793 2 195 1.3E-15 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_0124 f5bd50c055b8ed345738298ae6e3d130 206 Pfam PF04647 Accessory gene regulator B 11 183 2.1E-39 T 12-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Amet_1450 a9ad8930d61b54c427aee08e98723a4b 339 Gene3D G3DSA:2.60.120.10 61 304 3.6E-66 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_1450 a9ad8930d61b54c427aee08e98723a4b 339 SUPERFAMILY SSF51182 59 316 3.64E-56 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Amet_1450 a9ad8930d61b54c427aee08e98723a4b 339 Pfam PF05726 Pirin C-terminal cupin domain 207 309 2.6E-25 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Amet_1450 a9ad8930d61b54c427aee08e98723a4b 339 Gene3D G3DSA:2.60.120.10 162 278 3.6E-66 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_1450 a9ad8930d61b54c427aee08e98723a4b 339 Pfam PF02678 Pirin 56 140 4.3E-25 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Amet_1450 a9ad8930d61b54c427aee08e98723a4b 339 PIRSF PIRSF006232 23 317 2.0E-70 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Amet_4653 a302f62a47a53fa124b802daa38a15a1 124 Pfam PF01880 Desulfoferrodoxin 11 117 8.9E-31 T 12-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Amet_4653 a302f62a47a53fa124b802daa38a15a1 124 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 9 124 7.8E-26 T 12-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Amet_4653 a302f62a47a53fa124b802daa38a15a1 124 SUPERFAMILY SSF49367 7 121 1.96E-33 T 12-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Amet_4653 a302f62a47a53fa124b802daa38a15a1 124 Gene3D G3DSA:2.60.40.730 1 124 1.2E-42 T 12-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Amet_1561 17f99b392a2b3df5fd2b5f865846d17e 377 SUPERFAMILY SSF56601 49 372 3.32E-52 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_1561 17f99b392a2b3df5fd2b5f865846d17e 377 Pfam PF00144 Beta-lactamase 54 360 3.1E-37 T 12-10-2018 IPR001466 Beta-lactamase-related Amet_1561 17f99b392a2b3df5fd2b5f865846d17e 377 Gene3D G3DSA:3.40.710.10 45 373 2.2E-55 T 12-10-2018 Amet_3863 a56d5bc6f14a63601a1b0d233f41c34c 485 Gene3D G3DSA:3.50.50.60 46 480 2.9E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3863 a56d5bc6f14a63601a1b0d233f41c34c 485 SUPERFAMILY SSF56425 298 417 2.72E-29 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3863 a56d5bc6f14a63601a1b0d233f41c34c 485 SUPERFAMILY SSF51905 30 482 1.81E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3863 a56d5bc6f14a63601a1b0d233f41c34c 485 Gene3D G3DSA:3.90.700.10 275 416 2.9E-123 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3863 a56d5bc6f14a63601a1b0d233f41c34c 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 46 65 3.9E-5 T 12-10-2018 Amet_3863 a56d5bc6f14a63601a1b0d233f41c34c 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 428 450 3.9E-5 T 12-10-2018 Amet_3863 a56d5bc6f14a63601a1b0d233f41c34c 485 Pfam PF00890 FAD binding domain 45 466 1.1E-72 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_2067 4a740af0c7709a7a39dd7246ef1db0d3 454 Gene3D G3DSA:3.30.1490.130 261 316 5.6E-52 T 12-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 Amet_2067 4a740af0c7709a7a39dd7246ef1db0d3 454 Pfam PF01979 Amidohydrolase family 51 433 1.7E-18 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_2067 4a740af0c7709a7a39dd7246ef1db0d3 454 SUPERFAMILY SSF51556 55 387 1.07E-49 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_2067 4a740af0c7709a7a39dd7246ef1db0d3 454 Gene3D G3DSA:3.20.20.140 100 390 5.6E-52 T 12-10-2018 Amet_2067 4a740af0c7709a7a39dd7246ef1db0d3 454 SUPERFAMILY SSF51338 4 444 1.94E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_2067 4a740af0c7709a7a39dd7246ef1db0d3 454 Gene3D G3DSA:2.30.40.10 5 54 1.8E-18 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_2067 4a740af0c7709a7a39dd7246ef1db0d3 454 Gene3D G3DSA:3.20.20.140 55 90 1.8E-18 T 12-10-2018 Amet_2067 4a740af0c7709a7a39dd7246ef1db0d3 454 Gene3D G3DSA:2.30.40.10 391 404 5.6E-52 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_1555 f631fd909d7511455a2a0c63488d210f 230 SUPERFAMILY SSF52540 4 226 1.21E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1555 f631fd909d7511455a2a0c63488d210f 230 SMART SM00382 33 228 2.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1555 f631fd909d7511455a2a0c63488d210f 230 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1555 f631fd909d7511455a2a0c63488d210f 230 Gene3D G3DSA:3.40.50.300 1 229 1.1E-67 T 12-10-2018 Amet_1555 f631fd909d7511455a2a0c63488d210f 230 Pfam PF00005 ABC transporter 24 172 1.3E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0714 42561fafae7227d8031251349afea73e 51 Pfam PF09388 Spo0E like sporulation regulatory protein 7 46 4.1E-11 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 Amet_0714 42561fafae7227d8031251349afea73e 51 SUPERFAMILY SSF140500 3 50 3.14E-9 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 Amet_0481 56a85e8ee66c92c15afeea3605a52483 421 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 6 411 3.9E-99 T 12-10-2018 IPR002822 Nickel insertion protein Amet_0481 56a85e8ee66c92c15afeea3605a52483 421 Hamap MF_01074 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein [larC]. 2 420 37.967 T 12-10-2018 IPR002822 Nickel insertion protein Amet_0481 56a85e8ee66c92c15afeea3605a52483 421 Gene3D G3DSA:3.30.70.1380 273 362 8.2E-20 T 12-10-2018 Amet_0481 56a85e8ee66c92c15afeea3605a52483 421 Pfam PF01969 Protein of unknown function DUF111 5 411 2.9E-144 T 12-10-2018 IPR002822 Nickel insertion protein Amet_2553 d8bb797c1d16f7fbfa0b546ff2365993 352 Pfam PF03781 Sulfatase-modifying factor enzyme 1 76 190 1.8E-6 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Amet_2553 d8bb797c1d16f7fbfa0b546ff2365993 352 SUPERFAMILY SSF56436 25 348 2.35E-20 T 12-10-2018 IPR016187 C-type lectin fold Amet_0917 6e7841627973d6b3ce9bba949ddf617d 170 Pfam PF00731 AIR carboxylase 6 150 3.3E-67 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Amet_0917 6e7841627973d6b3ce9bba949ddf617d 170 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 157 32.575 T 12-10-2018 IPR033747 Class I PurE Amet_0917 6e7841627973d6b3ce9bba949ddf617d 170 SUPERFAMILY SSF52255 4 168 4.06E-68 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Amet_0917 6e7841627973d6b3ce9bba949ddf617d 170 SMART SM01001 4 153 2.5E-99 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Amet_0917 6e7841627973d6b3ce9bba949ddf617d 170 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 160 6.7E-67 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Amet_0917 6e7841627973d6b3ce9bba949ddf617d 170 Gene3D G3DSA:3.40.50.7700 2 170 5.6E-75 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Amet_0917 6e7841627973d6b3ce9bba949ddf617d 170 PIRSF PIRSF001338 1 164 1.1E-75 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Amet_2921 36dda1f4b65e5aa37858cc615e686652 570 Gene3D G3DSA:3.90.660.10 96 505 1.1E-74 T 12-10-2018 Amet_2921 36dda1f4b65e5aa37858cc615e686652 570 SUPERFAMILY SSF51905 54 563 2.98E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_2921 36dda1f4b65e5aa37858cc615e686652 570 Pfam PF01593 Flavin containing amine oxidoreductase 65 561 2.6E-44 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Amet_2921 36dda1f4b65e5aa37858cc615e686652 570 Gene3D G3DSA:3.50.50.60 57 558 1.1E-74 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_2921 36dda1f4b65e5aa37858cc615e686652 570 Gene3D G3DSA:1.20.1440.240 168 266 1.1E-74 T 12-10-2018 Amet_2921 36dda1f4b65e5aa37858cc615e686652 570 SUPERFAMILY SSF54373 377 510 1.44E-21 T 12-10-2018 Amet_2074 50dde01d6024c22640867d9b483b30f5 402 Pfam PF13458 Periplasmic binding protein 49 392 7.1E-63 T 12-10-2018 IPR028081 Leucine-binding protein domain Amet_2074 50dde01d6024c22640867d9b483b30f5 402 SUPERFAMILY SSF53822 47 395 1.05E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_2074 50dde01d6024c22640867d9b483b30f5 402 Gene3D G3DSA:3.40.50.2300 50 369 5.5E-93 T 12-10-2018 Amet_2074 50dde01d6024c22640867d9b483b30f5 402 Gene3D G3DSA:3.40.50.2300 172 301 5.5E-93 T 12-10-2018 Amet_1651 e600e6088e9b1435ee9c8e8d7fddaabd 246 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 5 238 3.4E-50 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Amet_1651 e600e6088e9b1435ee9c8e8d7fddaabd 246 Gene3D G3DSA:1.10.1760.20 4 237 8.5E-21 T 12-10-2018 Amet_0908 ebc5ee44b72e9aa0d27687fd1c0d7529 132 SUPERFAMILY SSF54637 1 127 2.49E-47 T 12-10-2018 IPR029069 HotDog domain superfamily Amet_0908 ebc5ee44b72e9aa0d27687fd1c0d7529 132 Gene3D G3DSA:3.10.129.10 1 131 8.9E-48 T 12-10-2018 Amet_0908 ebc5ee44b72e9aa0d27687fd1c0d7529 132 PIRSF PIRSF014972 2 132 1.1E-47 T 12-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase Amet_0908 ebc5ee44b72e9aa0d27687fd1c0d7529 132 Pfam PF03061 Thioesterase superfamily 41 107 3.3E-5 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Amet_1516 a48176f93e6da876fa669d27c5e0c322 144 SUPERFAMILY SSF55729 2 133 2.8E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1516 a48176f93e6da876fa669d27c5e0c322 144 Gene3D G3DSA:3.40.630.30 2 141 3.8E-26 T 12-10-2018 Amet_1516 a48176f93e6da876fa669d27c5e0c322 144 Pfam PF13673 Acetyltransferase (GNAT) domain 49 132 1.1E-14 T 12-10-2018 IPR000182 GNAT domain Amet_4139 e34b1cf9ed09ba37db7db863b7ebc36f 241 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 226 1.7E-63 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Amet_4139 e34b1cf9ed09ba37db7db863b7ebc36f 241 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 3 241 58.603 T 12-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 Amet_4139 e34b1cf9ed09ba37db7db863b7ebc36f 241 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 57 232 1.4E-58 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Amet_1797 2857b8b0f64731179626873bd4c8bf33 58 Gene3D G3DSA:1.10.260.40 12 55 1.3E-5 T 12-10-2018 Amet_1797 2857b8b0f64731179626873bd4c8bf33 58 SUPERFAMILY SSF47413 17 55 4.74E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0642 32b6d9dc066818c09ca14ea1d0fcafff 656 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 36 644 2.5E-192 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Amet_0642 32b6d9dc066818c09ca14ea1d0fcafff 656 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 569 5.2E-86 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_1719 0494f5b03740fde77355d28195789789 202 Pfam PF00882 Zinc dependent phospholipase C 5 162 1.7E-25 T 12-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 Amet_1719 0494f5b03740fde77355d28195789789 202 SUPERFAMILY SSF48537 26 151 8.01E-5 T 12-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 Amet_1626 2491659494544b480e3fa6724d784846 250 Gene3D G3DSA:2.20.25.110 145 209 9.1E-75 T 12-10-2018 Amet_1626 2491659494544b480e3fa6724d784846 250 SUPERFAMILY SSF53335 4 250 3.29E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_1626 2491659494544b480e3fa6724d784846 250 Pfam PF13649 Methyltransferase domain 42 137 3.6E-17 T 12-10-2018 Amet_1626 2491659494544b480e3fa6724d784846 250 Gene3D G3DSA:3.40.50.150 5 228 9.1E-75 T 12-10-2018 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 1.7E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 1.7E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 1.7E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 120 134 1.7E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 1.7E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 1.7E-60 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 SUPERFAMILY SSF51569 3 323 1.04E-142 T 12-10-2018 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 Gene3D G3DSA:3.20.20.70 1 322 7.1E-152 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 5 320 6.9E-153 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 SMART SM01004 2 321 1.3E-234 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 PIRSF PIRSF001415 1 324 4.4E-151 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0062 cc995e8edbb7c008a0d71743d5f6961e 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Amet_0019 eab7220a8ae72021c59de381e23e7656 279 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 110 274 4.4E-66 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Amet_0019 eab7220a8ae72021c59de381e23e7656 279 SUPERFAMILY SSF54675 3 109 3.81E-31 T 12-10-2018 Amet_0019 eab7220a8ae72021c59de381e23e7656 279 Gene3D G3DSA:3.90.1170.20 14 274 3.3E-110 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Amet_0019 eab7220a8ae72021c59de381e23e7656 279 SUPERFAMILY SSF51690 110 276 2.12E-61 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Amet_0019 eab7220a8ae72021c59de381e23e7656 279 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 20 108 2.3E-27 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Amet_0019 eab7220a8ae72021c59de381e23e7656 279 Gene3D G3DSA:3.20.20.70 124 266 3.3E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0019 eab7220a8ae72021c59de381e23e7656 279 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 11 276 4.9E-106 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Amet_0019 eab7220a8ae72021c59de381e23e7656 279 PIRSF PIRSF006250 1 279 1.0E-100 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Amet_4567 6a64e642d389c43eeca48d39dbfdd6ab 572 Gene3D G3DSA:3.20.20.140 69 310 1.3E-136 T 12-10-2018 Amet_4567 6a64e642d389c43eeca48d39dbfdd6ab 572 SUPERFAMILY SSF51338 11 350 3.48E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4567 6a64e642d389c43eeca48d39dbfdd6ab 572 SUPERFAMILY SSF51556 69 315 2.04E-40 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_4567 6a64e642d389c43eeca48d39dbfdd6ab 572 Gene3D G3DSA:2.30.40.10 11 347 1.3E-136 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_4567 6a64e642d389c43eeca48d39dbfdd6ab 572 TIGRFAM TIGR01178 ade: adenine deaminase 20 570 3.7E-200 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Amet_4567 6a64e642d389c43eeca48d39dbfdd6ab 572 Hamap MF_01518 Adenine deaminase [ade]. 19 569 40.249 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Amet_4567 6a64e642d389c43eeca48d39dbfdd6ab 572 Pfam PF13382 Adenine deaminase C-terminal domain 397 565 1.9E-66 T 12-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Amet_4567 6a64e642d389c43eeca48d39dbfdd6ab 572 Pfam PF01979 Amidohydrolase family 65 226 5.8E-18 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_4567 6a64e642d389c43eeca48d39dbfdd6ab 572 Pfam PF01979 Amidohydrolase family 262 346 2.1E-15 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Amet_1151 109a2c4936058e6eb6ed3248e73dc203 199 PIRSF PIRSF021362 3 192 1.2E-56 T 12-10-2018 IPR009206 Nucleotidase, putative Amet_1151 109a2c4936058e6eb6ed3248e73dc203 199 SUPERFAMILY SSF56784 6 162 3.48E-18 T 12-10-2018 IPR036412 HAD-like superfamily Amet_1151 109a2c4936058e6eb6ed3248e73dc203 199 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 6 182 1.1E-12 T 12-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 Amet_3467 0a095ddc680f3fcf049f32f03fc842f8 601 ProSitePatterns PS01303 BCCT family of transporters signature. 377 386 - T 12-10-2018 IPR018093 BCCT transporter, conserved site Amet_3467 0a095ddc680f3fcf049f32f03fc842f8 601 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 111 559 5.8E-157 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Amet_3467 0a095ddc680f3fcf049f32f03fc842f8 601 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 73 559 3.1E-190 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Amet_0076 a10b7340de5077c3bc73ec51847b22f7 246 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 8 244 9.4E-98 T 12-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 Amet_0076 a10b7340de5077c3bc73ec51847b22f7 246 Gene3D G3DSA:3.30.950.10 116 246 1.2E-53 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Amet_0076 a10b7340de5077c3bc73ec51847b22f7 246 Gene3D G3DSA:3.40.1010.10 1 115 5.6E-34 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Amet_0076 a10b7340de5077c3bc73ec51847b22f7 246 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 213 3.2E-40 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Amet_0076 a10b7340de5077c3bc73ec51847b22f7 246 SUPERFAMILY SSF53790 4 244 3.53E-58 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Amet_3385 4711da8f27d0ebad41bd3413a964c159 190 Gene3D G3DSA:3.40.50.2300 1 134 1.0E-21 T 12-10-2018 Amet_3385 4711da8f27d0ebad41bd3413a964c159 190 Gene3D G3DSA:1.10.10.10 135 190 4.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3385 4711da8f27d0ebad41bd3413a964c159 190 Pfam PF03861 ANTAR domain 133 185 4.1E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 Amet_3385 4711da8f27d0ebad41bd3413a964c159 190 Pfam PF00072 Response regulator receiver domain 6 114 1.1E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3385 4711da8f27d0ebad41bd3413a964c159 190 SUPERFAMILY SSF52172 1 185 2.42E-44 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3385 4711da8f27d0ebad41bd3413a964c159 190 SMART SM01012 130 185 8.9E-22 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 Amet_3385 4711da8f27d0ebad41bd3413a964c159 190 PIRSF PIRSF036382 1 190 4.0E-45 T 12-10-2018 IPR008327 Signal transduction response regulator, antiterminator Amet_3385 4711da8f27d0ebad41bd3413a964c159 190 SMART SM00448 4 114 1.1E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_4624 a05bacfba2ea5bb3646059976e96d0ee 303 SUPERFAMILY SSF53850 53 303 1.19E-68 T 12-10-2018 Amet_4624 a05bacfba2ea5bb3646059976e96d0ee 303 Gene3D G3DSA:3.40.190.10 132 265 2.1E-82 T 12-10-2018 Amet_4624 a05bacfba2ea5bb3646059976e96d0ee 303 Gene3D G3DSA:3.40.190.10 53 300 2.1E-82 T 12-10-2018 Amet_4624 a05bacfba2ea5bb3646059976e96d0ee 303 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 302 1.3E-74 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 Amet_4624 a05bacfba2ea5bb3646059976e96d0ee 303 Pfam PF12849 PBP superfamily domain 45 286 4.2E-40 T 12-10-2018 IPR024370 PBP domain Amet_0255 719e0cef9389699050cffff8b4b5bd9b 455 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 1.2E-214 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Amet_0255 719e0cef9389699050cffff8b4b5bd9b 455 Gene3D G3DSA:2.30.170.30 1 53 3.2E-25 T 12-10-2018 Amet_0255 719e0cef9389699050cffff8b4b5bd9b 455 PIRSF PIRSF018788 1 455 4.1E-237 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Amet_0255 719e0cef9389699050cffff8b4b5bd9b 455 Gene3D G3DSA:3.20.20.70 142 454 4.1E-151 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_0255 719e0cef9389699050cffff8b4b5bd9b 455 Gene3D G3DSA:1.10.220.70 55 141 1.6E-41 T 12-10-2018 Amet_3051 e355a9ccfc9679eb07d16f2c76dac10e 379 SMART SM00729 3 223 1.5E-53 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Amet_3051 e355a9ccfc9679eb07d16f2c76dac10e 379 Pfam PF06969 HemN C-terminal domain 303 366 2.8E-18 T 12-10-2018 IPR010723 HemN, C-terminal Amet_3051 e355a9ccfc9679eb07d16f2c76dac10e 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 352 1.2E-95 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Amet_3051 e355a9ccfc9679eb07d16f2c76dac10e 379 Gene3D G3DSA:3.80.30.20 1 299 3.3E-106 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Amet_3051 e355a9ccfc9679eb07d16f2c76dac10e 379 Pfam PF04055 Radical SAM superfamily 8 176 2.8E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Amet_3051 e355a9ccfc9679eb07d16f2c76dac10e 379 SUPERFAMILY SSF102114 4 377 4.84E-116 T 12-10-2018 Amet_3726 0215808f2e7bf2a1e4d6dc7744aae5c4 236 Pfam PF04239 Protein of unknown function (DUF421) 166 230 1.6E-8 T 12-10-2018 IPR007353 Protein of unknown function DUF421 Amet_3726 0215808f2e7bf2a1e4d6dc7744aae5c4 236 Pfam PF04239 Protein of unknown function (DUF421) 92 203 3.2E-32 T 12-10-2018 IPR007353 Protein of unknown function DUF421 Amet_3726 0215808f2e7bf2a1e4d6dc7744aae5c4 236 Gene3D G3DSA:3.30.240.20 168 225 2.5E-18 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Amet_3726 0215808f2e7bf2a1e4d6dc7744aae5c4 236 Gene3D G3DSA:3.30.240.20 80 153 4.6E-21 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Amet_0222 8685bf7283fd1b851ac1555716ec2a8e 497 Gene3D G3DSA:3.30.950.30 2 133 7.5E-26 T 12-10-2018 IPR038461 Schlafen, AAA domain superfamily Amet_0222 8685bf7283fd1b851ac1555716ec2a8e 497 Gene3D G3DSA:3.30.565.60 234 387 3.7E-13 T 12-10-2018 IPR038475 RecG, C-terminal domain superfamily Amet_0222 8685bf7283fd1b851ac1555716ec2a8e 497 Pfam PF04326 Putative DNA-binding domain 14 124 4.6E-19 T 12-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Amet_0222 8685bf7283fd1b851ac1555716ec2a8e 497 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 312 380 3.3E-6 T 12-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Amet_2487 d47019e2c3de3b4b2d547f7ff0338dbd 88 Pfam PF10719 Late competence development protein ComFB 3 84 1.9E-24 T 12-10-2018 IPR019657 Late competence development protein ComFB Amet_3917 069a0ddeaaa66cd4e8dd07cba7073437 197 SUPERFAMILY SSF46785 3 176 1.34E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3917 069a0ddeaaa66cd4e8dd07cba7073437 197 Gene3D G3DSA:1.10.10.10 1 94 1.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3917 069a0ddeaaa66cd4e8dd07cba7073437 197 Pfam PF03551 Transcriptional regulator PadR-like family 6 79 9.5E-12 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amet_2821 2b341fe29b521ccdd54f3bcea948afe7 278 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 8 275 7.3E-136 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amet_2821 2b341fe29b521ccdd54f3bcea948afe7 278 Pfam PF02675 S-adenosylmethionine decarboxylase 40 183 1.9E-30 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amet_2821 2b341fe29b521ccdd54f3bcea948afe7 278 Gene3D G3DSA:3.60.90.10 110 196 2.3E-7 T 12-10-2018 Amet_2821 2b341fe29b521ccdd54f3bcea948afe7 278 PIRSF PIRSF001356 3 277 1.5E-134 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amet_2821 2b341fe29b521ccdd54f3bcea948afe7 278 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 278 158.309 T 12-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Amet_2821 2b341fe29b521ccdd54f3bcea948afe7 278 SUPERFAMILY SSF56276 48 187 7.06E-24 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Amet_3781 2fe3f21c3b5a8a5d24216d08c8034cc8 401 Pfam PF00083 Sugar (and other) transporter 49 187 4.4E-10 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Amet_3781 2fe3f21c3b5a8a5d24216d08c8034cc8 401 SUPERFAMILY SSF103473 13 387 5.1E-43 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_3781 2fe3f21c3b5a8a5d24216d08c8034cc8 401 Gene3D G3DSA:1.20.1250.20 16 201 3.0E-15 T 12-10-2018 Amet_3781 2fe3f21c3b5a8a5d24216d08c8034cc8 401 Gene3D G3DSA:1.20.1250.20 204 388 6.0E-29 T 12-10-2018 Amet_2413 b293d41c54fc69f87a9f1acb9d41d133 216 Pfam PF04586 Caudovirus prohead serine protease 22 177 2.5E-33 T 12-10-2018 IPR006433 Prohead protease Amet_2413 b293d41c54fc69f87a9f1acb9d41d133 216 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 31 176 4.5E-26 T 12-10-2018 IPR006433 Prohead protease Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 Pfam PF02355 Protein export membrane protein 235 405 1.6E-16 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 Gene3D G3DSA:1.20.1640.10 247 414 3.5E-10 T 12-10-2018 Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 131 403 4.2E-99 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 158 396 2.1E-71 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 SUPERFAMILY SSF82866 213 407 7.19E-42 T 12-10-2018 Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 PRINTS PR00702 Acriflavin resistance protein family signature 380 403 9.7E-8 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 PRINTS PR00702 Acriflavin resistance protein family signature 252 275 9.7E-8 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 PRINTS PR00702 Acriflavin resistance protein family signature 305 329 9.7E-8 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 Gene3D G3DSA:3.30.1360.200 90 227 5.0E-29 T 12-10-2018 Amet_2348 0c981774f7848649b46beb91bde0fbb5 420 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 418 38.5 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Amet_2552 35a95aaef40f79678fb05c93b806b25c 113 SUPERFAMILY SSF158446 4 113 9.68E-12 T 12-10-2018 IPR036583 23S rRNA-intervening sequence superfamily Amet_2552 35a95aaef40f79678fb05c93b806b25c 113 Pfam PF05635 23S rRNA-intervening sequence protein 4 107 1.3E-12 T 12-10-2018 IPR012657 23S rRNA-intervening sequence protein Amet_2552 35a95aaef40f79678fb05c93b806b25c 113 Gene3D G3DSA:1.20.1440.60 2 113 3.2E-6 T 12-10-2018 IPR036583 23S rRNA-intervening sequence superfamily Amet_1856 23782bd1103f432c1fdb63fbe511a972 59 Gene3D G3DSA:1.10.10.10 4 56 3.1E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1856 23782bd1103f432c1fdb63fbe511a972 59 SUPERFAMILY SSF88659 6 39 6.54E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_2393 9a252853bb4abf079d8571105290dc54 126 Pfam PF09643 YopX protein 6 117 1.8E-22 T 12-10-2018 IPR019096 YopX protein Amet_2393 9a252853bb4abf079d8571105290dc54 126 Gene3D G3DSA:2.30.30.290 52 121 3.0E-6 T 12-10-2018 IPR023385 YopX-like, C-terminal Amet_2393 9a252853bb4abf079d8571105290dc54 126 SUPERFAMILY SSF159006 2 116 7.46E-18 T 12-10-2018 Amet_0355 0bae24250d3c732d44c6a0d84b130773 139 Gene3D G3DSA:2.60.320.10 29 137 1.1E-16 T 12-10-2018 IPR038690 NusG, domain 2 superfamily Amet_0355 0bae24250d3c732d44c6a0d84b130773 139 Pfam PF07009 NusG domain II 13 127 1.6E-19 T 12-10-2018 IPR024045 NusG, domain 2 Amet_2950 7d07c1df671985add80c166da19047d7 146 Gene3D G3DSA:3.40.630.30 1 144 2.1E-20 T 12-10-2018 Amet_2950 7d07c1df671985add80c166da19047d7 146 Pfam PF00583 Acetyltransferase (GNAT) family 43 134 1.7E-9 T 12-10-2018 IPR000182 GNAT domain Amet_2950 7d07c1df671985add80c166da19047d7 146 SUPERFAMILY SSF55729 1 139 1.8E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_3318 2b2dbb758776021ae51687a6b0f382d2 300 Gene3D G3DSA:1.10.3720.10 22 291 2.7E-61 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3318 2b2dbb758776021ae51687a6b0f382d2 300 SUPERFAMILY SSF161098 29 300 6.8E-70 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3318 2b2dbb758776021ae51687a6b0f382d2 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 289 2.9E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1195 ba45445e061f9bb536c5be336262ad61 244 PIRSF PIRSF015736 1 243 2.8E-89 T 12-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase Amet_1195 ba45445e061f9bb536c5be336262ad61 244 Gene3D G3DSA:3.40.50.12500 2 241 1.3E-85 T 12-10-2018 Amet_1195 ba45445e061f9bb536c5be336262ad61 244 Pfam PF01177 Asp/Glu/Hydantoin racemase 57 222 3.5E-7 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Amet_2757 ec95f6c8b2efa717147013665e8ed48a 316 Pfam PF03060 Nitronate monooxygenase 4 300 3.7E-73 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Amet_2757 ec95f6c8b2efa717147013665e8ed48a 316 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 4 306 6.7E-153 T 12-10-2018 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative Amet_2757 ec95f6c8b2efa717147013665e8ed48a 316 Gene3D G3DSA:3.20.20.70 3 314 5.6E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2757 ec95f6c8b2efa717147013665e8ed48a 316 SUPERFAMILY SSF51412 3 306 3.05E-73 T 12-10-2018 Amet_0598 c7cde40f91085f21d0512bc53d1fe985 236 SUPERFAMILY SSF52540 6 226 4.14E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0598 c7cde40f91085f21d0512bc53d1fe985 236 Gene3D G3DSA:3.40.50.300 4 232 5.5E-66 T 12-10-2018 Amet_0598 c7cde40f91085f21d0512bc53d1fe985 236 SMART SM00382 35 226 4.4E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0598 c7cde40f91085f21d0512bc53d1fe985 236 Pfam PF00005 ABC transporter 27 169 2.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0598 c7cde40f91085f21d0512bc53d1fe985 236 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4198 265e57f5a541933be8945048d8a18de5 304 Hamap MF_00663 Phosphatidylserine decarboxylase proenzyme [psd]. 2 296 41.05 T 12-10-2018 IPR033179 Phosphatidylserine decarboxylase, prokaryotic type 2 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Amet_4198 265e57f5a541933be8945048d8a18de5 304 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 75 294 2.3E-43 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Amet_4198 265e57f5a541933be8945048d8a18de5 304 Pfam PF02666 Phosphatidylserine decarboxylase 88 294 4.1E-61 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Amet_2418 4550850b05135af19f9afeda2101a5d8 143 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 18 96 6.4E-9 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component Amet_3991 aed9e44179b7668f79f98a83d6bbb534 165 Pfam PF12687 Protein of unknown function (DUF3801) 22 159 7.3E-19 T 12-10-2018 IPR024234 Protein of unknown function DUF3801 Amet_2257 ec5cd092fc0dc82820242a6a250685f5 64 SMART SM00530 4 59 2.2E-18 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2257 ec5cd092fc0dc82820242a6a250685f5 64 Pfam PF01381 Helix-turn-helix 5 59 6.8E-18 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2257 ec5cd092fc0dc82820242a6a250685f5 64 Gene3D G3DSA:1.10.260.40 1 64 7.6E-28 T 12-10-2018 Amet_2257 ec5cd092fc0dc82820242a6a250685f5 64 SUPERFAMILY SSF47413 3 63 2.36E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2040 833ba4204a918d935299969c2db4c527 141 SMART SM00347 21 122 4.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_2040 833ba4204a918d935299969c2db4c527 141 Gene3D G3DSA:1.10.10.10 7 140 1.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2040 833ba4204a918d935299969c2db4c527 141 SUPERFAMILY SSF46785 24 138 2.53E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2040 833ba4204a918d935299969c2db4c527 141 Pfam PF13463 Winged helix DNA-binding domain 31 95 1.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_1557 715d2d0ecda8098ac3d5479e3d30ce24 231 Pfam PF07730 Histidine kinase 195 228 2.0E-9 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 89 116 0.0013 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 154 1.1E-7 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 Gene3D G3DSA:3.30.70.250 1 82 2.1E-30 T 12-10-2018 Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 SUPERFAMILY SSF51161 86 225 3.74E-50 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 233 44.237 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 163 196 1.3E-9 T 12-10-2018 IPR001451 Hexapeptide repeat Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 172 200 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 1 85 4.0E-34 T 12-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 3 234 1.6E-114 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 Amet_3195 551b6ace66f54c5cbbb6eaf01aed9e0c 237 Gene3D G3DSA:2.160.10.10 83 234 2.5E-49 T 12-10-2018 Amet_0780 0af4b3ef56e0db8c8f02751d63f97239 161 Pfam PF08905 Domain of unknown function (DUF1850) 59 140 1.9E-21 T 12-10-2018 IPR015001 Protein of unknown function DUF1850 Amet_1751 a345ea259c61bc916d6a870f100273fc 50 Pfam PF11213 Protein of unknown function (DUF3006) 1 44 1.0E-8 T 12-10-2018 IPR021377 Protein of unknown function DUF3006 Amet_1319 2d02d703773d4975550be8e83cf268de 336 SUPERFAMILY SSF53659 2 331 1.02E-131 T 12-10-2018 Amet_1319 2d02d703773d4975550be8e83cf268de 336 TIGRFAM TIGR00175 mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 2 329 1.1E-132 T 12-10-2018 IPR004434 Isocitrate dehydrogenase NAD-dependent GO:0004449|GO:0006099|GO:0055114 Reactome: R-HSA-71403 Amet_1319 2d02d703773d4975550be8e83cf268de 336 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 327 1.6E-109 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amet_1319 2d02d703773d4975550be8e83cf268de 336 SMART SM01329 3 327 6.8E-191 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Amet_1319 2d02d703773d4975550be8e83cf268de 336 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 223 242 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Amet_1319 2d02d703773d4975550be8e83cf268de 336 Gene3D G3DSA:3.40.718.10 1 336 2.5E-151 T 12-10-2018 Amet_1214 afbf6e9076821c79fffed2ff60eb61a0 250 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 249 2.2E-48 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Amet_2579 821b45cdf687cb31dfa3cdac33f46a80 469 Gene3D G3DSA:3.40.50.300 1 200 2.2E-23 T 12-10-2018 Amet_2579 821b45cdf687cb31dfa3cdac33f46a80 469 Gene3D G3DSA:3.30.420.240 397 453 2.5E-6 T 12-10-2018 Amet_2579 821b45cdf687cb31dfa3cdac33f46a80 469 SUPERFAMILY SSF52540 24 179 2.93E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3438 20eef36f13a34b4731873ce675bd08f4 383 PIRSF PIRSF000390 11 383 1.8E-106 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amet_3438 20eef36f13a34b4731873ce675bd08f4 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 26 377 7.4E-122 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Amet_3438 20eef36f13a34b4731873ce675bd08f4 383 Gene3D G3DSA:3.90.1150.10 257 383 7.6E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3438 20eef36f13a34b4731873ce675bd08f4 383 SUPERFAMILY SSF53383 25 382 8.16E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3438 20eef36f13a34b4731873ce675bd08f4 383 Gene3D G3DSA:3.40.640.10 6 253 2.8E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3605 6888139fee90577fffc0eb5fd0f61d9c 356 Gene3D G3DSA:3.40.640.10 14 257 1.3E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3605 6888139fee90577fffc0eb5fd0f61d9c 356 SUPERFAMILY SSF53383 5 355 2.29E-87 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3605 6888139fee90577fffc0eb5fd0f61d9c 356 Pfam PF00266 Aminotransferase class-V 16 344 7.4E-34 T 12-10-2018 IPR000192 Aminotransferase class V domain Amet_3605 6888139fee90577fffc0eb5fd0f61d9c 356 Gene3D G3DSA:3.90.1150.10 4 353 1.3E-115 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3605 6888139fee90577fffc0eb5fd0f61d9c 356 PIRSF PIRSF000524 1 356 1.1E-88 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Amet_3983 e111b3418bcc34f1c19aa6c88e9bf892 137 Pfam PF12666 PrgI family protein 6 96 1.0E-26 T 12-10-2018 IPR024414 Uncharacterised protein family PrgI Amet_0269 673ab4b25d3f54b15d51ed233b0b3ec3 391 Gene3D G3DSA:1.20.1090.10 175 384 9.3E-66 T 12-10-2018 Amet_0269 673ab4b25d3f54b15d51ed233b0b3ec3 391 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 163 191 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Amet_0269 673ab4b25d3f54b15d51ed233b0b3ec3 391 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 375 7.0E-109 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Amet_0269 673ab4b25d3f54b15d51ed233b0b3ec3 391 Gene3D G3DSA:3.40.50.1970 2 174 5.6E-47 T 12-10-2018 Amet_0269 673ab4b25d3f54b15d51ed233b0b3ec3 391 SUPERFAMILY SSF56796 3 384 1.23E-114 T 12-10-2018 Amet_1794 d4777a5e422131acd7f9b08ee884b1e8 69 Pfam PF11148 Protein of unknown function (DUF2922) 3 69 9.2E-23 T 12-10-2018 IPR021321 Protein of unknown function DUF2922 Amet_3033 8c523098c5a9c482455ae8e7c07252ec 338 SUPERFAMILY SSF52540 111 292 3.66E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3033 8c523098c5a9c482455ae8e7c07252ec 338 Pfam PF02562 PhoH-like protein 112 315 2.4E-95 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 Amet_3033 8c523098c5a9c482455ae8e7c07252ec 338 Gene3D G3DSA:3.40.50.300 109 315 5.6E-75 T 12-10-2018 Amet_2438 d363f1d8f5996647d6f2af844f7b2dcd 240 Gene3D G3DSA:3.40.630.40 1 186 2.7E-53 T 12-10-2018 Amet_2438 d363f1d8f5996647d6f2af844f7b2dcd 240 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 178 9.7E-45 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_2438 d363f1d8f5996647d6f2af844f7b2dcd 240 SUPERFAMILY SSF53187 1 183 1.88E-49 T 12-10-2018 Amet_2438 d363f1d8f5996647d6f2af844f7b2dcd 240 SMART SM00646 67 179 1.8E-44 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_0163 17eb58012c780801bdbdc39fed9d9002 532 Pfam PF01943 Polysaccharide biosynthesis protein 6 310 6.7E-39 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Amet_0163 17eb58012c780801bdbdc39fed9d9002 532 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 363 505 8.7E-29 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Amet_0163 17eb58012c780801bdbdc39fed9d9002 532 PIRSF PIRSF038958 1 523 4.5E-151 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Amet_3697 1b9aab635583d33101701dae695e5972 158 SUPERFAMILY SSF55068 1 155 5.76E-69 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amet_3697 1b9aab635583d33101701dae695e5972 158 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 152 1.9E-64 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amet_3697 1b9aab635583d33101701dae695e5972 158 Gene3D G3DSA:3.30.1060.10 1 158 3.9E-71 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amet_3697 1b9aab635583d33101701dae695e5972 158 Pfam PF01625 Peptide methionine sulfoxide reductase 3 153 2.7E-65 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amet_3697 1b9aab635583d33101701dae695e5972 158 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 158 37.442 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Amet_4154 bfacfc511099b996d8282432b54b15d4 140 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 5 130 4.9E-28 T 12-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Amet_4466 b3fa6c75bd3c32339f1ffb0c0782cba3 179 Pfam PF00281 Ribosomal protein L5 24 80 3.7E-25 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4466 b3fa6c75bd3c32339f1ffb0c0782cba3 179 SUPERFAMILY SSF55282 3 178 4.47E-76 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4466 b3fa6c75bd3c32339f1ffb0c0782cba3 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.665 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Amet_4466 b3fa6c75bd3c32339f1ffb0c0782cba3 179 Gene3D G3DSA:3.30.1440.10 1 179 2.2E-79 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4466 b3fa6c75bd3c32339f1ffb0c0782cba3 179 PIRSF PIRSF002161 1 179 1.5E-65 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4466 b3fa6c75bd3c32339f1ffb0c0782cba3 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4466 b3fa6c75bd3c32339f1ffb0c0782cba3 179 Pfam PF00673 ribosomal L5P family C-terminus 85 177 1.7E-39 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_0717 a70ccafec5417d04444f961f2ce34806 190 Pfam PF04542 Sigma-70 region 2 28 91 7.0E-8 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0717 a70ccafec5417d04444f961f2ce34806 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 188 1.7E-14 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Amet_0717 a70ccafec5417d04444f961f2ce34806 190 Gene3D G3DSA:1.10.10.10 116 190 6.8E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0717 a70ccafec5417d04444f961f2ce34806 190 Gene3D G3DSA:1.20.120.1810 2 91 2.2E-6 T 12-10-2018 Amet_0717 a70ccafec5417d04444f961f2ce34806 190 SUPERFAMILY SSF88946 5 81 7.06E-14 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Amet_0717 a70ccafec5417d04444f961f2ce34806 190 SUPERFAMILY SSF88659 105 188 9.91E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_0454 cec47d3d1066125b109f584ff58ec6f1 235 Pfam PF00117 Glutamine amidotransferase class-I 51 192 2.5E-16 T 12-10-2018 IPR017926 Glutamine amidotransferase Amet_0454 cec47d3d1066125b109f584ff58ec6f1 235 Gene3D G3DSA:3.40.50.880 22 228 1.8E-43 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0454 cec47d3d1066125b109f584ff58ec6f1 235 SUPERFAMILY SSF52317 37 233 8.87E-37 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_2162 f68f5e423aa667f4d1653fdfeca1cdc5 119 Pfam PF02152 Dihydroneopterin aldolase 4 116 4.2E-36 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Amet_2162 f68f5e423aa667f4d1653fdfeca1cdc5 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 5.3E-39 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Amet_2162 f68f5e423aa667f4d1653fdfeca1cdc5 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 2.7E-35 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Amet_2162 f68f5e423aa667f4d1653fdfeca1cdc5 119 SUPERFAMILY SSF55620 2 119 2.62E-39 T 12-10-2018 Amet_2162 f68f5e423aa667f4d1653fdfeca1cdc5 119 SMART SM00905 4 117 6.1E-52 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Amet_2162 f68f5e423aa667f4d1653fdfeca1cdc5 119 Gene3D G3DSA:3.30.1130.10 1 119 1.8E-45 T 12-10-2018 Amet_3144 6d5502eab19551b6db0f8160ced1449a 149 Gene3D G3DSA:2.30.30.40 7 132 2.4E-44 T 12-10-2018 Amet_3144 6d5502eab19551b6db0f8160ced1449a 149 Gene3D G3DSA:2.40.50.180 24 133 2.4E-44 T 12-10-2018 Amet_3144 6d5502eab19551b6db0f8160ced1449a 149 SUPERFAMILY SSF50341 2 143 6.54E-39 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Amet_3144 6d5502eab19551b6db0f8160ced1449a 149 SMART SM00260 1 138 5.0E-41 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_3144 6d5502eab19551b6db0f8160ced1449a 149 Pfam PF01584 CheW-like domain 5 141 7.7E-37 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_2679 4bdc847eacab80cac96147a2b4acc6a5 208 Gene3D G3DSA:3.90.550.10 1 206 5.0E-37 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_2679 4bdc847eacab80cac96147a2b4acc6a5 208 SUPERFAMILY SSF53448 1 165 4.96E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Amet_2679 4bdc847eacab80cac96147a2b4acc6a5 208 Pfam PF00535 Glycosyl transferase family 2 4 144 8.6E-25 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Amet_3428 b883a7a9000ecd0d2bcbdc72a83f3467 367 Pfam PF14398 YheC/D like ATP-grasp 111 361 2.6E-67 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D Amet_3428 b883a7a9000ecd0d2bcbdc72a83f3467 367 SUPERFAMILY SSF56059 118 334 1.18E-9 T 12-10-2018 Amet_3904 f98eeb7e77d01b71543f9ad52e845e50 272 Pfam PF01061 ABC-2 type transporter 28 237 5.5E-24 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amet_3904 f98eeb7e77d01b71543f9ad52e845e50 272 PIRSF PIRSF006648 2 272 9.6E-66 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_0332 30ef83c10e5457c31b279e4b49a20aef 221 Pfam PF02535 ZIP Zinc transporter 75 217 2.1E-22 T 12-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Amet_1596 52c7166790b030928986c06fa1868d4e 154 ProDom PD020942 TRANSPOSASE C TN554 TRANSPOSON TRANSPOSITION FOR DNA-BINDING TRANSPOSABLE DNA ELEMENT 9 119 2.0E-57 T 12-10-2018 Amet_2295 9301049cd056a97bd5a6248c35bf3675 265 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 261 8.8E-126 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Amet_2295 9301049cd056a97bd5a6248c35bf3675 265 Pfam PF13614 AAA domain 3 160 2.5E-24 T 12-10-2018 IPR025669 AAA domain Amet_2295 9301049cd056a97bd5a6248c35bf3675 265 Gene3D G3DSA:3.40.50.300 1 253 2.2E-67 T 12-10-2018 Amet_2295 9301049cd056a97bd5a6248c35bf3675 265 PIRSF PIRSF003092 1 265 7.4E-90 T 12-10-2018 IPR025501 ATP binding protein MinD Amet_2295 9301049cd056a97bd5a6248c35bf3675 265 SUPERFAMILY SSF52540 1 248 1.66E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1295 233b9c00781b2677899073a4ea4c8413 204 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1295 233b9c00781b2677899073a4ea4c8413 204 Gene3D G3DSA:3.40.50.300 4 204 4.8E-61 T 12-10-2018 Amet_1295 233b9c00781b2677899073a4ea4c8413 204 SMART SM00382 35 203 5.8E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1295 233b9c00781b2677899073a4ea4c8413 204 SUPERFAMILY SSF52540 7 203 6.8E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1295 233b9c00781b2677899073a4ea4c8413 204 Pfam PF00005 ABC transporter 26 165 1.6E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1119 4a474cc7e87ac8ef29fad1829a10eae5 518 PIRSF PIRSF002741 1 518 2.1E-92 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Amet_1119 4a474cc7e87ac8ef29fad1829a10eae5 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 433 6.0E-76 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain Amet_1119 4a474cc7e87ac8ef29fad1829a10eae5 518 Gene3D G3DSA:3.40.190.10 78 502 4.0E-112 T 12-10-2018 Amet_1119 4a474cc7e87ac8ef29fad1829a10eae5 518 Gene3D G3DSA:3.10.105.10 270 489 4.0E-112 T 12-10-2018 Amet_1119 4a474cc7e87ac8ef29fad1829a10eae5 518 SUPERFAMILY SSF53850 43 511 6.43E-113 T 12-10-2018 Amet_0691 a607a877601372fbdd82fb2bc0ff7869 296 Pfam PF00795 Carbon-nitrogen hydrolase 6 249 1.4E-48 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Amet_0691 a607a877601372fbdd82fb2bc0ff7869 296 Gene3D G3DSA:3.60.110.10 1 278 1.9E-76 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amet_0691 a607a877601372fbdd82fb2bc0ff7869 296 SUPERFAMILY SSF56317 4 254 1.83E-67 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Amet_0965 658e9f0931c39e5ca0a4de61d4665db1 133 SUPERFAMILY SSF143422 1 130 3.27E-43 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0965 658e9f0931c39e5ca0a4de61d4665db1 133 Gene3D G3DSA:3.30.70.1290 1 133 2.1E-38 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0965 658e9f0931c39e5ca0a4de61d4665db1 133 SMART SM01321 10 129 1.1E-36 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_0965 658e9f0931c39e5ca0a4de61d4665db1 133 Pfam PF01797 Transposase IS200 like 11 129 1.5E-38 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_1925 a83c25ded4c792e361e9a48c8832f606 74 SUPERFAMILY SSF47413 3 55 1.18E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_1925 a83c25ded4c792e361e9a48c8832f606 74 Gene3D G3DSA:1.10.260.40 1 70 8.5E-6 T 12-10-2018 Amet_0387 a83c25ded4c792e361e9a48c8832f606 74 SUPERFAMILY SSF47413 3 55 1.18E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0387 a83c25ded4c792e361e9a48c8832f606 74 Gene3D G3DSA:1.10.260.40 1 70 8.5E-6 T 12-10-2018 Amet_1410 15aff2bce4d2fde998e712b74705370a 685 Pfam PF13408 Recombinase zinc beta ribbon domain 331 389 8.4E-11 T 12-10-2018 IPR025827 Recombinase zinc beta ribbon domain Amet_1410 15aff2bce4d2fde998e712b74705370a 685 Pfam PF07508 Recombinase 193 315 3.4E-10 T 12-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Amet_1410 15aff2bce4d2fde998e712b74705370a 685 Pfam PF00239 Resolvase, N terminal domain 16 167 9.6E-23 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_1410 15aff2bce4d2fde998e712b74705370a 685 SUPERFAMILY SSF53041 15 167 2.62E-21 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_1410 15aff2bce4d2fde998e712b74705370a 685 Gene3D G3DSA:3.40.50.1390 13 169 8.7E-22 T 12-10-2018 Amet_1410 15aff2bce4d2fde998e712b74705370a 685 SMART SM00857 16 168 1.1E-27 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_1758 09698319fa92d1697f1cb3850d6d724a 515 Pfam PF00665 Integrase core domain 131 262 2.4E-14 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Amet_2824 e43484ffc2b4d4bd65a851c5925e9b0a 189 SUPERFAMILY SSF140478 30 177 1.83E-53 T 12-10-2018 IPR023353 LemA-like domain superfamily Amet_2824 e43484ffc2b4d4bd65a851c5925e9b0a 189 Pfam PF04011 LemA family 8 188 8.2E-68 T 12-10-2018 IPR007156 LemA Amet_2824 e43484ffc2b4d4bd65a851c5925e9b0a 189 Gene3D G3DSA:1.20.1440.20 20 188 5.9E-67 T 12-10-2018 IPR023353 LemA-like domain superfamily Amet_3410 34490fa3ee437fd9e6cd3887a7396396 290 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 224 4.7E-60 T 12-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Amet_3410 34490fa3ee437fd9e6cd3887a7396396 290 PIRSF PIRSF015582 1 290 5.3E-82 T 12-10-2018 IPR011206 Citrate lyase beta subunit-like Amet_3410 34490fa3ee437fd9e6cd3887a7396396 290 Gene3D G3DSA:3.20.20.60 1 289 1.9E-97 T 12-10-2018 Amet_3410 34490fa3ee437fd9e6cd3887a7396396 290 SUPERFAMILY SSF51621 2 234 1.01E-61 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Amet_0588 ed6c9f4514224987b711be645a8efcec 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 306 3.8E-47 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_1589 eacfc635417cfd1102cced3ab6ab58bb 399 Pfam PF02417 Chromate transporter 22 182 2.4E-23 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Amet_1589 eacfc635417cfd1102cced3ab6ab58bb 399 Pfam PF02417 Chromate transporter 227 396 1.5E-35 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Amet_1589 eacfc635417cfd1102cced3ab6ab58bb 399 PIRSF PIRSF004810 2 399 1.6E-72 T 12-10-2018 IPR014047 Chromate transporter, long chain Amet_1589 eacfc635417cfd1102cced3ab6ab58bb 399 TIGRFAM TIGR00937 2A51: chromate efflux transporter 28 396 2.5E-63 T 12-10-2018 IPR014047 Chromate transporter, long chain Amet_2769 0175210e3fe42011b96f803d6832d85b 74 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 26 35 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Amet_2769 0175210e3fe42011b96f803d6832d85b 74 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 49 63 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Amet_2769 0175210e3fe42011b96f803d6832d85b 74 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 11 70 1.7E-26 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Amet_2769 0175210e3fe42011b96f803d6832d85b 74 Gene3D G3DSA:1.10.8.910 11 74 2.0E-27 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily Amet_4558 21c3c705492bd41b49664a4c461d8063 311 Gene3D G3DSA:3.60.21.10 72 274 1.2E-24 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_4558 21c3c705492bd41b49664a4c461d8063 311 SUPERFAMILY SSF56300 70 307 1.7E-36 T 12-10-2018 Amet_4558 21c3c705492bd41b49664a4c461d8063 311 Pfam PF00149 Calcineurin-like phosphoesterase 72 243 5.3E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Amet_1697 576b38e9aa9437d637abb64331c765be 395 PIRSF PIRSF005243 1 395 1.3E-155 T 12-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 Amet_1697 576b38e9aa9437d637abb64331c765be 395 SMART SM00849 35 226 8.2E-23 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_1697 576b38e9aa9437d637abb64331c765be 395 SUPERFAMILY SSF52218 251 394 7.09E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1697 576b38e9aa9437d637abb64331c765be 395 Gene3D G3DSA:3.40.50.360 248 395 9.6E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1697 576b38e9aa9437d637abb64331c765be 395 Pfam PF00258 Flavodoxin 255 385 2.3E-14 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Amet_1697 576b38e9aa9437d637abb64331c765be 395 Gene3D G3DSA:3.60.15.10 2 246 1.4E-101 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_1697 576b38e9aa9437d637abb64331c765be 395 SUPERFAMILY SSF56281 10 281 4.85E-50 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_0669 d53f6a0af808aed0ea7c223661db1221 254 TIGRFAM TIGR04482 D_pro_red_PrdD: proline reductase cluster protein PrdD 9 254 8.6E-116 T 12-10-2018 IPR031000 Proline reductase cluster protein PrdD Amet_0669 d53f6a0af808aed0ea7c223661db1221 254 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 10 250 7.4E-8 T 12-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Amet_3713 c40c1bb44e504a884177e8a9002606a3 256 Pfam PF05742 Transport and Golgi organisation 2 1 237 4.4E-71 T 12-10-2018 IPR008551 Transport and Golgi organisation protein 2 Amet_4101 bad7ff51394dbf8a500e779a64ef066b 119 Gene3D G3DSA:3.40.30.10 22 117 3.0E-19 T 12-10-2018 Amet_4101 bad7ff51394dbf8a500e779a64ef066b 119 SUPERFAMILY SSF52833 25 115 9.39E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_2269 fb962086ffabe46bcd4aaeb399bc3f2b 85 Gene3D G3DSA:2.30.110.10 2 85 2.1E-23 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amet_2269 fb962086ffabe46bcd4aaeb399bc3f2b 85 SUPERFAMILY SSF50475 1 83 2.62E-27 T 12-10-2018 Amet_2269 fb962086ffabe46bcd4aaeb399bc3f2b 85 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 19 78 1.9E-13 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Amet_3364 23b32f7f90527784e472d9cf2a2aeafc 74 SMART SM00966 7 52 1.3E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_3364 23b32f7f90527784e472d9cf2a2aeafc 74 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 49 1.3E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Amet_3364 23b32f7f90527784e472d9cf2a2aeafc 74 SUPERFAMILY SSF89447 3 56 1.92E-14 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily Amet_3364 23b32f7f90527784e472d9cf2a2aeafc 74 Gene3D G3DSA:2.10.260.10 1 72 9.5E-9 T 12-10-2018 Amet_3414 e219db0942ecc30b21d4df4e0ddfd247 428 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 162 411 2.1E-124 T 12-10-2018 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Amet_3414 e219db0942ecc30b21d4df4e0ddfd247 428 SUPERFAMILY SSF51604 165 412 1.44E-82 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amet_3414 e219db0942ecc30b21d4df4e0ddfd247 428 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 3.1E-76 T 12-10-2018 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Amet_3414 e219db0942ecc30b21d4df4e0ddfd247 428 Gene3D G3DSA:3.30.390.10 1 164 4.2E-73 T 12-10-2018 IPR029017 Enolase-like, N-terminal Amet_3414 e219db0942ecc30b21d4df4e0ddfd247 428 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 412 2.8E-187 T 12-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Amet_3414 e219db0942ecc30b21d4df4e0ddfd247 428 PIRSF PIRSF017107 1 413 5.1E-198 T 12-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Amet_3414 e219db0942ecc30b21d4df4e0ddfd247 428 Gene3D G3DSA:3.20.20.120 165 413 4.5E-106 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Amet_3414 e219db0942ecc30b21d4df4e0ddfd247 428 SUPERFAMILY SSF54826 1 159 1.54E-60 T 12-10-2018 Amet_1598 b36820bbbec6e0c2d72c7c00c0128da0 543 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 139 6.8E-14 T 12-10-2018 Amet_1598 b36820bbbec6e0c2d72c7c00c0128da0 543 SUPERFAMILY SSF55874 23 185 3.54E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1598 b36820bbbec6e0c2d72c7c00c0128da0 543 Gene3D G3DSA:3.30.565.10 15 176 8.2E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2003 7b45e7749022bc8f29f53d376633a373 416 Pfam PF12679 ABC-2 family transporter protein 106 412 1.7E-10 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Amet_2372 5ec8e4e23ae00ba1a6746fc885d5002d 454 Pfam PF13941 MutL protein 5 449 1.3E-170 T 12-10-2018 IPR006230 Protein MutL Amet_2372 5ec8e4e23ae00ba1a6746fc885d5002d 454 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 58 449 3.0E-86 T 12-10-2018 IPR006230 Protein MutL Amet_2372 5ec8e4e23ae00ba1a6746fc885d5002d 454 PIRSF PIRSF004729 2 451 1.3E-153 T 12-10-2018 IPR006230 Protein MutL Amet_2468 77afd66daea34cb7f3fbf24b51ac0d86 101 Pfam PF03956 Lysine exporter LysO 8 85 6.1E-7 T 12-10-2018 IPR005642 Lysine exporter LysO Amet_4743 379c02e901807eab8674c768c6f85f7d 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 283 1.3E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_4743 379c02e901807eab8674c768c6f85f7d 293 Gene3D G3DSA:1.10.3720.10 51 291 1.5E-62 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4743 379c02e901807eab8674c768c6f85f7d 293 SUPERFAMILY SSF161098 55 279 6.8E-55 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0697 9f6aa27f23a89858a05f1359e7e9d300 441 PIRSF PIRSF000521 4 438 1.8E-51 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_0697 9f6aa27f23a89858a05f1359e7e9d300 441 Pfam PF00202 Aminotransferase class-III 26 435 1.1E-132 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_0697 9f6aa27f23a89858a05f1359e7e9d300 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Amet_0697 9f6aa27f23a89858a05f1359e7e9d300 441 Gene3D G3DSA:3.90.1150.10 10 432 6.6E-171 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_0697 9f6aa27f23a89858a05f1359e7e9d300 441 Gene3D G3DSA:3.40.640.10 66 332 6.6E-171 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_0697 9f6aa27f23a89858a05f1359e7e9d300 441 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 18 434 2.8E-172 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 Amet_0697 9f6aa27f23a89858a05f1359e7e9d300 441 SUPERFAMILY SSF53383 23 437 1.79E-140 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_4303 d95640a67026436ec5d5ae7d8ba924b0 182 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 176 1.6E-33 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amet_4303 d95640a67026436ec5d5ae7d8ba924b0 182 Gene3D G3DSA:3.40.920.10 2 182 1.0E-51 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_4303 d95640a67026436ec5d5ae7d8ba924b0 182 SUPERFAMILY SSF53323 5 181 3.79E-41 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_3859 5f34c51776ff2abaa4a7a856938ce3a0 754 Pfam PF04205 FMN-binding domain 48 119 1.1E-12 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_3859 5f34c51776ff2abaa4a7a856938ce3a0 754 Pfam PF04205 FMN-binding domain 146 239 4.1E-12 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_3859 5f34c51776ff2abaa4a7a856938ce3a0 754 SUPERFAMILY SSF51905 253 742 1.32E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_3859 5f34c51776ff2abaa4a7a856938ce3a0 754 SUPERFAMILY SSF56425 525 690 7.33E-20 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3859 5f34c51776ff2abaa4a7a856938ce3a0 754 Pfam PF00890 FAD binding domain 265 715 1.1E-39 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_3859 5f34c51776ff2abaa4a7a856938ce3a0 754 SMART SM00900 146 242 2.2E-18 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_3859 5f34c51776ff2abaa4a7a856938ce3a0 754 SMART SM00900 48 122 6.1E-14 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_3859 5f34c51776ff2abaa4a7a856938ce3a0 754 Gene3D G3DSA:3.90.1010.20 135 252 1.6E-9 T 12-10-2018 Amet_3859 5f34c51776ff2abaa4a7a856938ce3a0 754 Gene3D G3DSA:3.90.1010.20 69 132 6.7E-7 T 12-10-2018 Amet_2783 728b460d58492a1cea382262e2a4247e 231 Pfam PF04298 Putative neutral zinc metallopeptidase 11 226 9.1E-90 T 12-10-2018 IPR007395 Putative neutral zinc metallopeptidase Amet_1480 052689c0b7441d37f1334fa1488288df 391 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 6 301 9.2E-80 T 12-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Amet_1480 052689c0b7441d37f1334fa1488288df 391 SUPERFAMILY SSF52540 1 289 1.06E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1480 052689c0b7441d37f1334fa1488288df 391 Pfam PF02374 Anion-transporting ATPase 1 302 2.8E-92 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Amet_1480 052689c0b7441d37f1334fa1488288df 391 Gene3D G3DSA:2.60.40.790 319 389 2.0E-21 T 12-10-2018 IPR008978 HSP20-like chaperone Amet_1480 052689c0b7441d37f1334fa1488288df 391 Gene3D G3DSA:3.40.50.300 1 318 2.0E-84 T 12-10-2018 Amet_2146 708fc70079255abeadc6062825ed5752 856 SMART SM00487 356 561 0.0026 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Amet_2146 708fc70079255abeadc6062825ed5752 856 SMART SM00490 704 787 3.9E-7 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_2146 708fc70079255abeadc6062825ed5752 856 Pfam PF00271 Helicase conserved C-terminal domain 675 787 7.1E-10 T 12-10-2018 IPR001650 Helicase, C-terminal Amet_2146 708fc70079255abeadc6062825ed5752 856 Pfam PF13091 PLD-like domain 36 194 3.3E-8 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Amet_2146 708fc70079255abeadc6062825ed5752 856 SUPERFAMILY SSF52540 482 840 1.04E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2146 708fc70079255abeadc6062825ed5752 856 Gene3D G3DSA:3.30.870.10 13 208 1.6E-5 T 12-10-2018 Amet_2146 708fc70079255abeadc6062825ed5752 856 Gene3D G3DSA:3.40.50.300 584 854 5.7E-23 T 12-10-2018 Amet_2146 708fc70079255abeadc6062825ed5752 856 SUPERFAMILY SSF52540 380 579 1.98E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2146 708fc70079255abeadc6062825ed5752 856 Pfam PF00176 SNF2 family N-terminal domain 383 614 2.7E-13 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Amet_2146 708fc70079255abeadc6062825ed5752 856 Gene3D G3DSA:3.40.50.10810 371 575 1.1E-17 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Amet_1134 7a817d51bb062cc3ac6206c2e42f5220 269 SMART SM00382 33 231 2.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1134 7a817d51bb062cc3ac6206c2e42f5220 269 Gene3D G3DSA:3.40.50.300 2 267 2.2E-61 T 12-10-2018 Amet_1134 7a817d51bb062cc3ac6206c2e42f5220 269 Pfam PF00005 ABC transporter 26 181 2.6E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1134 7a817d51bb062cc3ac6206c2e42f5220 269 SUPERFAMILY SSF52540 4 252 2.19E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1134 7a817d51bb062cc3ac6206c2e42f5220 269 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_4622 36d1155d298ae968757fd02368a7ed9a 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 268 3.4E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_4622 36d1155d298ae968757fd02368a7ed9a 281 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 8 276 3.2E-89 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Amet_4622 36d1155d298ae968757fd02368a7ed9a 281 SUPERFAMILY SSF161098 14 264 7.85E-41 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4622 36d1155d298ae968757fd02368a7ed9a 281 Gene3D G3DSA:1.10.3720.10 53 278 4.5E-34 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1107 038fbc8dea4af1cbff996843ad5ed594 498 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 1.5E-152 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Amet_4500 fc80a0105950dc8ae9d9485f064c37ac 142 Gene3D G3DSA:1.10.1520.10 13 142 2.6E-43 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Amet_4500 fc80a0105950dc8ae9d9485f064c37ac 142 SUPERFAMILY SSF69065 19 138 4.53E-33 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Amet_4500 fc80a0105950dc8ae9d9485f064c37ac 142 PIRSF PIRSF005520 10 142 4.3E-46 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family Amet_4500 fc80a0105950dc8ae9d9485f064c37ac 142 Pfam PF00636 Ribonuclease III domain 26 121 4.7E-12 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Amet_4500 fc80a0105950dc8ae9d9485f064c37ac 142 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 16 140 28.375 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family Amet_2800 1e4d3d48f2624f7a9d98cd8a9c81e315 153 Pfam PF05103 DivIVA protein 2 132 2.3E-47 T 12-10-2018 IPR007793 DivIVA family Amet_2800 1e4d3d48f2624f7a9d98cd8a9c81e315 153 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 2 35 1.0E-16 T 12-10-2018 IPR019933 DivIVA domain Amet_0182 6bd0069b75820e365ee1c7d97beae875 491 Pfam PF00395 S-layer homology domain 423 466 2.2E-8 T 12-10-2018 IPR001119 S-layer homology domain Amet_0182 6bd0069b75820e365ee1c7d97beae875 491 Pfam PF00395 S-layer homology domain 358 401 2.4E-13 T 12-10-2018 IPR001119 S-layer homology domain Amet_0182 6bd0069b75820e365ee1c7d97beae875 491 Pfam PF00395 S-layer homology domain 288 327 1.1E-5 T 12-10-2018 IPR001119 S-layer homology domain Amet_2077 dab175a598cd5e6e590ea4f52d73fc18 257 Pfam PF00005 ABC transporter 21 179 3.3E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2077 dab175a598cd5e6e590ea4f52d73fc18 257 SUPERFAMILY SSF52540 3 252 2.71E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2077 dab175a598cd5e6e590ea4f52d73fc18 257 Gene3D G3DSA:3.40.50.300 1 254 2.4E-58 T 12-10-2018 Amet_2077 dab175a598cd5e6e590ea4f52d73fc18 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 1.2E-9 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Amet_2077 dab175a598cd5e6e590ea4f52d73fc18 257 SMART SM00382 28 228 2.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_4225 9c38aefd5c04c8aaef238f992ae13101 159 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 32 149 6.6E-39 T 12-10-2018 IPR005562 SpoVA Amet_4225 9c38aefd5c04c8aaef238f992ae13101 159 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 14 153 5.8E-60 T 12-10-2018 IPR014203 Sporulation stage V, protein AC Amet_2930 a0dfbcc3ecab915b6f4a2f4bd994499f 125 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 30 108 5.0E-22 T 12-10-2018 IPR014229 Sporulation protein YtfJ Amet_2930 a0dfbcc3ecab915b6f4a2f4bd994499f 125 PIRSF PIRSF021377 4 125 1.3E-14 T 12-10-2018 IPR014229 Sporulation protein YtfJ Amet_3070 9560f9499a355352887a5337f52d9331 301 SUPERFAMILY SSF52540 2 226 5.03E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3070 9560f9499a355352887a5337f52d9331 301 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3070 9560f9499a355352887a5337f52d9331 301 Gene3D G3DSA:3.40.50.300 1 235 4.3E-63 T 12-10-2018 Amet_3070 9560f9499a355352887a5337f52d9331 301 SMART SM00382 28 208 3.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3070 9560f9499a355352887a5337f52d9331 301 Pfam PF00005 ABC transporter 19 161 1.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1002 360bba6e2d145ca17511045f2aff6787 202 Gene3D G3DSA:3.40.50.150 16 184 5.5E-30 T 12-10-2018 Amet_1002 360bba6e2d145ca17511045f2aff6787 202 SUPERFAMILY SSF53335 21 201 2.76E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_1002 360bba6e2d145ca17511045f2aff6787 202 Pfam PF13489 Methyltransferase domain 29 142 1.6E-16 T 12-10-2018 Amet_2619 dba7517f931c5b3301651f0ba3d2c11c 221 SUPERFAMILY SSF46955 8 81 1.79E-14 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily Amet_2619 dba7517f931c5b3301651f0ba3d2c11c 221 Pfam PF13411 MerR HTH family regulatory protein 9 75 7.4E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_2619 dba7517f931c5b3301651f0ba3d2c11c 221 SMART SM00422 9 77 1.4E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Amet_0721 41e233b5aef88561c52591067479eccb 54 Pfam PF12841 YvrJ protein family 8 41 1.7E-17 T 12-10-2018 IPR024419 Protein of unknown function YvrJ Amet_1368 4e82b231aaf73b73fcd77535bed15c7a 449 Pfam PF14620 YpeB sporulation 13 373 2.9E-126 T 12-10-2018 IPR014239 Spore germination YpeB GO:0009847 Amet_1368 4e82b231aaf73b73fcd77535bed15c7a 449 Pfam PF03413 Peptidase propeptide and YPEB domain 376 433 2.0E-4 T 12-10-2018 IPR025711 PepSY domain Amet_1368 4e82b231aaf73b73fcd77535bed15c7a 449 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 9 437 2.2E-124 T 12-10-2018 IPR014239 Spore germination YpeB GO:0009847 Amet_2497 0d226e008693c4b016f74e82e5d21735 207 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 14 202 8.0E-39 T 12-10-2018 IPR014245 Sporulation stage III, protein AF Amet_2497 0d226e008693c4b016f74e82e5d21735 207 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 2 105 1.9E-24 T 12-10-2018 IPR014245 Sporulation stage III, protein AF Amet_1155 20fd33ee21e124f0fcef914f37f243ef 289 Pfam PF06007 Phosphonate metabolism protein PhnJ 4 276 6.4E-143 T 12-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_1155 20fd33ee21e124f0fcef914f37f243ef 289 PIRSF PIRSF011468 1 286 4.0E-140 T 12-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_2874 5f067d3ca064d14f1508b622db8bfd7c 118 Pfam PF06947 Protein of unknown function (DUF1290) 23 107 2.7E-39 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 Amet_2874 5f067d3ca064d14f1508b622db8bfd7c 118 PIRSF PIRSF018579 1 113 2.0E-41 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 Amet_3371 4b7aac92681c22e6e4bc31a6008bf92e 528 SMART SM00382 26 228 1.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3371 4b7aac92681c22e6e4bc31a6008bf92e 528 Gene3D G3DSA:3.40.50.300 1 280 2.7E-59 T 12-10-2018 Amet_3371 4b7aac92681c22e6e4bc31a6008bf92e 528 SUPERFAMILY SSF52540 296 514 3.22E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3371 4b7aac92681c22e6e4bc31a6008bf92e 528 SUPERFAMILY SSF52540 2 254 9.23E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3371 4b7aac92681c22e6e4bc31a6008bf92e 528 Pfam PF00005 ABC transporter 335 467 3.9E-13 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3371 4b7aac92681c22e6e4bc31a6008bf92e 528 Pfam PF12848 ABC transporter 223 303 2.6E-19 T 12-10-2018 IPR032781 ABC-transporter extension domain Amet_3371 4b7aac92681c22e6e4bc31a6008bf92e 528 Gene3D G3DSA:3.40.50.300 285 528 2.6E-42 T 12-10-2018 Amet_3371 4b7aac92681c22e6e4bc31a6008bf92e 528 Pfam PF00005 ABC transporter 18 184 1.7E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3351 20e4489ba239e1ae72203d4b976617ba 224 Pfam PF02517 CAAX protease self-immunity 123 214 4.8E-14 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_3311 c2762170f7398f5335f1f647b13c349e 150 Gene3D G3DSA:3.40.50.720 61 137 4.0E-5 T 12-10-2018 Amet_1202 c01c43a571d95e9409897a0fd251fbcd 235 Pfam PF05949 Bacterial protein of unknown function (DUF881) 89 228 9.3E-32 T 12-10-2018 IPR010273 Protein of unknown function DUF881 Amet_1202 c01c43a571d95e9409897a0fd251fbcd 235 Gene3D G3DSA:3.30.70.1880 88 235 5.6E-31 T 12-10-2018 Amet_0316 8ea2a3f34c67fc92de0e6d9a9259f50a 120 SUPERFAMILY SSF52172 3 118 1.57E-26 T 12-10-2018 IPR011006 CheY-like superfamily Amet_0316 8ea2a3f34c67fc92de0e6d9a9259f50a 120 Gene3D G3DSA:3.40.50.2300 2 120 6.9E-26 T 12-10-2018 Amet_0316 8ea2a3f34c67fc92de0e6d9a9259f50a 120 Pfam PF00072 Response regulator receiver domain 5 112 1.9E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0316 8ea2a3f34c67fc92de0e6d9a9259f50a 120 SMART SM00448 3 113 6.6E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0205 30b1b8fb94c1fafec399520c43c894e0 378 Gene3D G3DSA:3.40.50.2000 21 196 3.3E-11 T 12-10-2018 Amet_0205 30b1b8fb94c1fafec399520c43c894e0 378 Pfam PF00534 Glycosyl transferases group 1 197 355 4.6E-9 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 Amet_0205 30b1b8fb94c1fafec399520c43c894e0 378 SUPERFAMILY SSF53756 30 374 4.46E-25 T 12-10-2018 Amet_0205 30b1b8fb94c1fafec399520c43c894e0 378 Gene3D G3DSA:3.40.50.2000 197 357 1.5E-13 T 12-10-2018 Amet_0205 30b1b8fb94c1fafec399520c43c894e0 378 Pfam PF13477 Glycosyl transferase 4-like 12 154 3.8E-7 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Amet_3165 e5bd875d12e046431db28ee90e7ee0f6 531 Pfam PF01943 Polysaccharide biosynthesis protein 26 323 3.0E-31 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Amet_3165 e5bd875d12e046431db28ee90e7ee0f6 531 PIRSF PIRSF038958 18 530 8.8E-114 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Amet_3165 e5bd875d12e046431db28ee90e7ee0f6 531 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 375 518 1.3E-22 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Amet_3752 9d780d672316e0c0ff8c21a456c4f121 210 Pfam PF09360 Iron-binding zinc finger CDGSH type 17 56 4.4E-11 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Amet_3752 9d780d672316e0c0ff8c21a456c4f121 210 Pfam PF09360 Iron-binding zinc finger CDGSH type 158 203 2.8E-17 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Amet_3752 9d780d672316e0c0ff8c21a456c4f121 210 Pfam PF06902 Divergent 4Fe-4S mono-cluster 77 139 8.1E-27 T 12-10-2018 IPR010693 Divergent 4Fe-4S mono-cluster Amet_3752 9d780d672316e0c0ff8c21a456c4f121 210 Gene3D G3DSA:3.40.5.90 143 210 5.2E-16 T 12-10-2018 Amet_3752 9d780d672316e0c0ff8c21a456c4f121 210 SMART SM00704 17 62 3.9E-4 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Amet_3752 9d780d672316e0c0ff8c21a456c4f121 210 SMART SM00704 172 209 5.5E-9 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 Amet_3752 9d780d672316e0c0ff8c21a456c4f121 210 Gene3D G3DSA:3.40.5.90 1 77 1.0E-10 T 12-10-2018 Amet_0688 3b0ab849610b7aa5a1cf814e1dbac530 56 Gene3D G3DSA:3.40.50.720 1 56 8.0E-16 T 12-10-2018 Amet_0090 fe7875f2b8bf8a231392d97e0c94bc14 255 Pfam PF05175 Methyltransferase small domain 35 173 4.0E-14 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Amet_0090 fe7875f2b8bf8a231392d97e0c94bc14 255 SUPERFAMILY SSF53335 10 214 6.44E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0090 fe7875f2b8bf8a231392d97e0c94bc14 255 Gene3D G3DSA:3.40.50.150 9 252 4.5E-69 T 12-10-2018 Amet_1431 6bcc8877b5cb913b2158e80a79cd96d6 352 Pfam PF00144 Beta-lactamase 8 331 1.2E-40 T 12-10-2018 IPR001466 Beta-lactamase-related Amet_1431 6bcc8877b5cb913b2158e80a79cd96d6 352 SUPERFAMILY SSF56601 6 334 9.22E-60 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_1431 6bcc8877b5cb913b2158e80a79cd96d6 352 Gene3D G3DSA:3.40.710.10 2 346 3.7E-60 T 12-10-2018 Amet_1882 9ccd1700614a767ed34438b861ed6317 321 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 313 3.8E-76 T 12-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Amet_1882 9ccd1700614a767ed34438b861ed6317 321 Gene3D G3DSA:3.20.20.140 1 318 2.3E-83 T 12-10-2018 Amet_1882 9ccd1700614a767ed34438b861ed6317 321 SUPERFAMILY SSF51556 1 320 5.44E-67 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_1104 1062df8e717bb389bcf3e511cde98d8b 303 SUPERFAMILY SSF53067 130 302 1.73E-39 T 12-10-2018 Amet_1104 1062df8e717bb389bcf3e511cde98d8b 303 SUPERFAMILY SSF53067 4 126 1.42E-32 T 12-10-2018 Amet_1104 1062df8e717bb389bcf3e511cde98d8b 303 Gene3D G3DSA:3.30.420.40 1 125 1.3E-37 T 12-10-2018 Amet_1104 1062df8e717bb389bcf3e511cde98d8b 303 Gene3D G3DSA:3.30.420.150 127 303 4.9E-51 T 12-10-2018 Amet_1104 1062df8e717bb389bcf3e511cde98d8b 303 Pfam PF02541 Ppx/GppA phosphatase family 24 301 4.4E-61 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Amet_4159 f6d10a8d3c63374a13c1ad2eef1fe7ad 169 Pfam PF01899 Na+/H+ ion antiporter subunit 17 163 5.2E-35 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Amet_4159 f6d10a8d3c63374a13c1ad2eef1fe7ad 169 PIRSF PIRSF019239 7 169 9.5E-51 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 Amet_4050 9b0cff920807e9f45cfd46caf457f03c 143 Pfam PF14359 Domain of unknown function (DUF4406) 39 132 1.3E-4 T 12-10-2018 IPR025518 Protein of unknown function DUF4406 Amet_3263 0392195d818f5594105f9b60b1201a9f 57 SUPERFAMILY SSF140500 13 55 4.97E-7 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 Amet_3263 0392195d818f5594105f9b60b1201a9f 57 Pfam PF09388 Spo0E like sporulation regulatory protein 13 51 6.9E-6 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 Amet_0259 ecaec270ffb6a1a0086a6dcac7816d1f 483 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 468 2.6E-209 T 12-10-2018 IPR013357 Acetaldehyde dehydrogenase, acetylating Amet_0259 ecaec270ffb6a1a0086a6dcac7816d1f 483 Gene3D G3DSA:3.40.605.10 14 444 3.3E-176 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amet_0259 ecaec270ffb6a1a0086a6dcac7816d1f 483 Pfam PF00171 Aldehyde dehydrogenase family 12 286 1.1E-24 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amet_0259 ecaec270ffb6a1a0086a6dcac7816d1f 483 SUPERFAMILY SSF53720 10 451 2.09E-74 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amet_0259 ecaec270ffb6a1a0086a6dcac7816d1f 483 Gene3D G3DSA:3.40.309.10 223 407 3.3E-176 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amet_3792 a14d1548cf44b573011681a3a5ca0c38 156 SUPERFAMILY SSF159941 42 140 7.19E-13 T 12-10-2018 IPR024047 MM3350-like superfamily Amet_3792 a14d1548cf44b573011681a3a5ca0c38 156 Gene3D G3DSA:3.10.290.30 21 154 1.2E-10 T 12-10-2018 IPR024047 MM3350-like superfamily Amet_3792 a14d1548cf44b573011681a3a5ca0c38 156 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 42 150 1.1E-9 T 12-10-2018 IPR012912 Plasmid pRiA4b, Orf3 Amet_1225 3b3f2fbbda0ebfdea038909bbdc65d7d 541 Gene3D G3DSA:1.20.58.220 337 438 5.1E-15 T 12-10-2018 IPR038078 PhoU-like domain superfamily Amet_1225 3b3f2fbbda0ebfdea038909bbdc65d7d 541 Pfam PF02690 Na+/Pi-cotransporter 140 256 3.2E-18 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Amet_1225 3b3f2fbbda0ebfdea038909bbdc65d7d 541 Pfam PF02690 Na+/Pi-cotransporter 13 148 1.8E-53 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Amet_1225 3b3f2fbbda0ebfdea038909bbdc65d7d 541 Pfam PF01895 PhoU domain 344 429 7.8E-13 T 12-10-2018 IPR026022 PhoU domain Amet_1225 3b3f2fbbda0ebfdea038909bbdc65d7d 541 Pfam PF01895 PhoU domain 448 532 2.2E-14 T 12-10-2018 IPR026022 PhoU domain Amet_1225 3b3f2fbbda0ebfdea038909bbdc65d7d 541 SUPERFAMILY SSF109755 324 536 7.43E-48 T 12-10-2018 Amet_1225 3b3f2fbbda0ebfdea038909bbdc65d7d 541 Gene3D G3DSA:1.20.58.220 441 541 2.6E-20 T 12-10-2018 IPR038078 PhoU-like domain superfamily Amet_1225 3b3f2fbbda0ebfdea038909bbdc65d7d 541 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 3 312 1.2E-74 T 12-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 Amet_0715 357fc9973f8c32ea7488a2064f7a380b 155 Pfam PF06695 Putative small multi-drug export protein 24 144 4.3E-40 T 12-10-2018 IPR009577 Putative small multi-drug export Amet_1636 8d2c756c12c211d336a36b4e38d43afb 449 Pfam PF02386 Cation transport protein 13 429 4.1E-67 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Amet_1636 8d2c756c12c211d336a36b4e38d43afb 449 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 30 418 7.7E-112 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Amet_2232 cfa5684fc901f1ea92ea113593c1c6b3 122 Pfam PF01925 Sulfite exporter TauE/SafE 12 121 5.8E-23 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Amet_3962 c583cc08053b386c59596c226fffd373 769 SUPERFAMILY SSF56112 18 273 1.86E-29 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily Amet_3962 c583cc08053b386c59596c226fffd373 769 SMART SM00220 11 270 7.6E-11 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amet_3962 c583cc08053b386c59596c226fffd373 769 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Amet_3962 c583cc08053b386c59596c226fffd373 769 Pfam PF00069 Protein kinase domain 18 212 7.6E-19 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Amet_3962 c583cc08053b386c59596c226fffd373 769 Gene3D G3DSA:1.10.510.10 5 291 1.0E-25 T 12-10-2018 Amet_3186 234670b633d98c3095a67d67e4ef0d89 320 Pfam PF03116 NQR2, RnfD, RnfE family 12 307 1.5E-82 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Amet_3186 234670b633d98c3095a67d67e4ef0d89 320 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 12 308 3.7E-66 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Amet_2147 54633e1215596a6cb8760f8ea2f3cced 776 Gene3D G3DSA:1.25.40.10 514 614 8.2E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_2147 54633e1215596a6cb8760f8ea2f3cced 776 SUPERFAMILY SSF48452 518 612 1.14E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_2147 54633e1215596a6cb8760f8ea2f3cced 776 SUPERFAMILY SSF48452 35 235 2.9E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_2147 54633e1215596a6cb8760f8ea2f3cced 776 Gene3D G3DSA:2.60.40.10 381 503 4.5E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold Amet_2147 54633e1215596a6cb8760f8ea2f3cced 776 Gene3D G3DSA:1.25.40.10 25 242 7.1E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_2147 54633e1215596a6cb8760f8ea2f3cced 776 SUPERFAMILY SSF49452 279 380 3.92E-5 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Amet_2331 59a59146f89e20bc487b406b55727d19 339 SUPERFAMILY SSF53474 49 335 4.19E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_2331 59a59146f89e20bc487b406b55727d19 339 Gene3D G3DSA:3.40.50.1820 49 336 3.3E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_2331 59a59146f89e20bc487b406b55727d19 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 163 176 1.5E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_2331 59a59146f89e20bc487b406b55727d19 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 149 162 1.5E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_2331 59a59146f89e20bc487b406b55727d19 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 115 1.5E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Amet_2331 59a59146f89e20bc487b406b55727d19 339 Pfam PF12146 Serine aminopeptidase, S33 70 317 1.0E-16 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 Amet_3275 5ef1ca680af503ca104bc6ccf123c577 338 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 254 291 1.6E-8 T 12-10-2018 IPR011964 YVTN beta-propeller repeat Amet_3275 5ef1ca680af503ca104bc6ccf123c577 338 Pfam PF02239 Cytochrome D1 heme domain 91 206 8.2E-10 T 12-10-2018 Amet_3275 5ef1ca680af503ca104bc6ccf123c577 338 SUPERFAMILY SSF50974 39 335 9.94E-70 T 12-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Amet_3275 5ef1ca680af503ca104bc6ccf123c577 338 Gene3D G3DSA:2.130.10.10 136 337 2.1E-47 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amet_3275 5ef1ca680af503ca104bc6ccf123c577 338 Gene3D G3DSA:2.130.10.10 28 135 3.5E-20 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Amet_1839 bc6dccf134773caac0c6112cd05c4cd7 177 Pfam PF04060 Putative Fe-S cluster 121 153 3.4E-12 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 Amet_1839 bc6dccf134773caac0c6112cd05c4cd7 177 Gene3D G3DSA:1.10.15.40 112 167 3.7E-18 T 12-10-2018 Amet_4642 0e9ee3e5029a3275cfc0ecfc3bf90e2b 74 SUPERFAMILY SSF54285 1 72 1.8E-14 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Amet_4642 0e9ee3e5029a3275cfc0ecfc3bf90e2b 74 Pfam PF02597 ThiS family 5 74 3.8E-11 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Amet_4642 0e9ee3e5029a3275cfc0ecfc3bf90e2b 74 Gene3D G3DSA:3.10.20.30 1 74 5.1E-14 T 12-10-2018 IPR012675 Beta-grasp domain superfamily Amet_2143 9e5199689deb7a5a3129e4a31b9913cf 290 PIRSF PIRSF030850 1 283 8.2E-74 T 12-10-2018 IPR011396 Uncharacterised conserved protein UCP030850 Amet_2143 9e5199689deb7a5a3129e4a31b9913cf 290 Pfam PF13391 HNH endonuclease 175 228 1.4E-8 T 12-10-2018 IPR003615 HNH nuclease Amet_3638 0837cfaaf4fa17d4520ffc1e2b0f63e8 141 Pfam PF05866 Endodeoxyribonuclease RusA 7 119 1.6E-22 T 12-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 Amet_3638 0837cfaaf4fa17d4520ffc1e2b0f63e8 141 Gene3D G3DSA:3.30.1330.70 1 124 3.3E-12 T 12-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Amet_3638 0837cfaaf4fa17d4520ffc1e2b0f63e8 141 SUPERFAMILY SSF103084 1 121 5.49E-20 T 12-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Amet_1307 e6070558f54d3ac77338f55e163b1c6b 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1307 e6070558f54d3ac77338f55e163b1c6b 624 Pfam PF01609 Transposase DDE domain 262 549 1.2E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_2651 e6070558f54d3ac77338f55e163b1c6b 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2651 e6070558f54d3ac77338f55e163b1c6b 624 Pfam PF01609 Transposase DDE domain 262 549 1.2E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_3261 010338f815e223a787485127d31e9ae4 216 Pfam PF04191 Phospholipid methyltransferase 126 193 1.9E-10 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Amet_3261 010338f815e223a787485127d31e9ae4 216 Gene3D G3DSA:1.20.120.1630 9 207 5.1E-23 T 12-10-2018 Amet_1601 6ad5aa9f5e47a4e15ca473025beb0a10 358 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 3 204 6.8E-34 T 12-10-2018 IPR000477 Reverse transcriptase domain Amet_1601 6ad5aa9f5e47a4e15ca473025beb0a10 358 Pfam PF08388 Group II intron, maturase-specific domain 222 301 1.9E-19 T 12-10-2018 IPR013597 Group II intron, maturase-specific Amet_1601 6ad5aa9f5e47a4e15ca473025beb0a10 358 SUPERFAMILY SSF56672 2 273 2.8E-43 T 12-10-2018 Amet_0378 5ed39c1157212feeea0f1caa48bb44f2 108 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 96 2.1E-12 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Amet_0378 5ed39c1157212feeea0f1caa48bb44f2 108 Gene3D G3DSA:3.30.2310.20 1 100 2.2E-21 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Amet_3827 90d3d41371a839d236d34f0bd556d009 182 Gene3D G3DSA:3.30.70.1710 1 79 6.5E-24 T 12-10-2018 Amet_3827 90d3d41371a839d236d34f0bd556d009 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 154 1.0E-26 T 12-10-2018 Amet_3827 90d3d41371a839d236d34f0bd556d009 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 8.0E-31 T 12-10-2018 Amet_3827 90d3d41371a839d236d34f0bd556d009 182 SUPERFAMILY SSF143414 3 93 1.44E-23 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_3827 90d3d41371a839d236d34f0bd556d009 182 SUPERFAMILY SSF143414 95 181 6.41E-19 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_3827 90d3d41371a839d236d34f0bd556d009 182 SMART SM00877 3 77 2.4E-22 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3827 90d3d41371a839d236d34f0bd556d009 182 SMART SM00877 95 173 7.3E-22 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3827 90d3d41371a839d236d34f0bd556d009 182 Gene3D G3DSA:3.30.70.1710 80 181 7.0E-26 T 12-10-2018 Amet_3827 90d3d41371a839d236d34f0bd556d009 182 Pfam PF00936 BMC domain 96 173 1.9E-17 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3827 90d3d41371a839d236d34f0bd556d009 182 Pfam PF00936 BMC domain 4 76 1.8E-21 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3827 90d3d41371a839d236d34f0bd556d009 182 PIRSF PIRSF034834 1 182 1.8E-50 T 12-10-2018 IPR011238 Polyhedral organelle shell protein PduT Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 366 4.6E-124 T 12-10-2018 IPR010162 Peptidase M20B, peptidase T-like Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 Pfam PF07687 Peptidase dimerisation domain 181 273 5.5E-16 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 Gene3D G3DSA:3.40.630.10 7 348 1.0E-124 T 12-10-2018 Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 SUPERFAMILY SSF53187 5 371 1.39E-63 T 12-10-2018 Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 PIRSF PIRSF001123 4 98 7.8E-8 T 12-10-2018 IPR008007 Peptidase M42 Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 PIRSF PIRSF001123 226 371 1.2E-5 T 12-10-2018 IPR008007 Peptidase M42 Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 PIRSF PIRSF001123 101 182 4.7E-4 T 12-10-2018 IPR008007 Peptidase M42 Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 SUPERFAMILY SSF55031 178 289 2.62E-24 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 Gene3D G3DSA:3.30.70.360 176 287 1.0E-124 T 12-10-2018 Amet_0148 4b34b2a478b46d07dc03e1e157450aa6 371 Pfam PF01546 Peptidase family M20/M25/M40 72 367 7.8E-19 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 Amet_4726 082bd4b8de7b0e2cbf2bdce8068f8466 148 Gene3D G3DSA:3.40.630.30 32 142 3.2E-25 T 12-10-2018 Amet_4726 082bd4b8de7b0e2cbf2bdce8068f8466 148 SUPERFAMILY SSF55729 51 144 1.22E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_4726 082bd4b8de7b0e2cbf2bdce8068f8466 148 Pfam PF00583 Acetyltransferase (GNAT) family 52 135 1.2E-15 T 12-10-2018 IPR000182 GNAT domain Amet_4375 16f32ceb57532dc3dd56f9efc8aeb0d1 236 Pfam PF09992 Phosphodiester glycosidase 51 224 2.7E-26 T 12-10-2018 IPR018711 Phosphodiester glycosidase Amet_0407 16f32ceb57532dc3dd56f9efc8aeb0d1 236 Pfam PF09992 Phosphodiester glycosidase 51 224 2.7E-26 T 12-10-2018 IPR018711 Phosphodiester glycosidase Amet_1944 16f32ceb57532dc3dd56f9efc8aeb0d1 236 Pfam PF09992 Phosphodiester glycosidase 51 224 2.7E-26 T 12-10-2018 IPR018711 Phosphodiester glycosidase Amet_0735 452e623bc5e6bce8f665ec2d6078855d 42 Pfam PF14070 Putative motility protein 1 41 3.3E-8 T 12-10-2018 IPR025906 Putative motility protein Amet_0999 41505e2b2a23c0f8a19bbc36b0e5fd6d 239 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 220 1.2E-61 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amet_0999 41505e2b2a23c0f8a19bbc36b0e5fd6d 239 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 215 4.8E-63 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amet_0999 41505e2b2a23c0f8a19bbc36b0e5fd6d 239 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 232 16.799 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amet_0999 41505e2b2a23c0f8a19bbc36b0e5fd6d 239 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.1E-35 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amet_0999 41505e2b2a23c0f8a19bbc36b0e5fd6d 239 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 97 123 1.1E-35 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amet_0999 41505e2b2a23c0f8a19bbc36b0e5fd6d 239 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 148 176 1.1E-35 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amet_0999 41505e2b2a23c0f8a19bbc36b0e5fd6d 239 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 79 97 1.1E-35 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Amet_2010 70891df66edb1128a85f7b41f07fa834 251 SUPERFAMILY SSF53335 4 156 3.04E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2010 70891df66edb1128a85f7b41f07fa834 251 Gene3D G3DSA:3.40.50.150 4 213 7.9E-39 T 12-10-2018 Amet_2010 70891df66edb1128a85f7b41f07fa834 251 Pfam PF08241 Methyltransferase domain 51 145 7.5E-24 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Amet_1544 bfef75da91b6a4d242630c01ff5c1559 635 Pfam PF02517 CAAX protease self-immunity 140 225 9.8E-10 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_1544 bfef75da91b6a4d242630c01ff5c1559 635 SUPERFAMILY SSF51445 309 581 4.11E-18 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_1544 bfef75da91b6a4d242630c01ff5c1559 635 Gene3D G3DSA:3.20.20.80 301 593 3.6E-25 T 12-10-2018 Amet_2697 4a9107e89944872505fe6db19df35f87 148 Pfam PF01584 CheW-like domain 9 143 9.0E-35 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_2697 4a9107e89944872505fe6db19df35f87 148 SMART SM00260 5 142 1.8E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Amet_2697 4a9107e89944872505fe6db19df35f87 148 Gene3D G3DSA:2.30.30.40 11 136 6.8E-40 T 12-10-2018 Amet_2697 4a9107e89944872505fe6db19df35f87 148 Gene3D G3DSA:2.40.50.180 28 137 6.8E-40 T 12-10-2018 Amet_2697 4a9107e89944872505fe6db19df35f87 148 SUPERFAMILY SSF50341 8 143 2.75E-35 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Amet_2199 1c0f760bbe93390ac7e8881164a48ac0 163 Pfam PF01863 Protein of unknown function DUF45 8 155 5.5E-42 T 12-10-2018 IPR002725 Protein of unknown function DUF45 Amet_2199 1c0f760bbe93390ac7e8881164a48ac0 163 Gene3D G3DSA:3.30.2010.10 63 161 6.5E-19 T 12-10-2018 Amet_2289 a1af4bec947ebc42445a3091691560a8 232 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 181 186 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Amet_2289 a1af4bec947ebc42445a3091691560a8 232 Pfam PF04002 RadC-like JAB domain 111 229 7.8E-46 T 12-10-2018 IPR025657 RadC-like JAB domain Amet_2289 a1af4bec947ebc42445a3091691560a8 232 TIGRFAM TIGR00608 radc: DNA repair protein RadC 18 231 5.6E-75 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 Amet_2289 a1af4bec947ebc42445a3091691560a8 232 SUPERFAMILY SSF102712 157 198 4.71E-5 T 12-10-2018 Amet_2289 a1af4bec947ebc42445a3091691560a8 232 Gene3D G3DSA:3.40.140.10 107 232 1.8E-47 T 12-10-2018 Amet_4171 fb392dfcdaf9b8dc3063cba04819d77f 325 Pfam PF00395 S-layer homology domain 157 199 6.7E-5 T 12-10-2018 IPR001119 S-layer homology domain Amet_4171 fb392dfcdaf9b8dc3063cba04819d77f 325 Pfam PF00395 S-layer homology domain 104 135 3.8E-5 T 12-10-2018 IPR001119 S-layer homology domain Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 SUPERFAMILY SSF48452 99 362 1.12E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 Pfam PF07719 Tetratricopeptide repeat 330 362 1.2E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 Pfam PF13181 Tetratricopeptide repeat 300 322 0.035 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 Pfam PF13181 Tetratricopeptide repeat 264 292 0.0065 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 Gene3D G3DSA:1.25.40.10 88 228 1.0E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 SMART SM00028 329 362 1.9E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 SMART SM00028 295 328 0.06 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 SMART SM00028 261 294 0.0011 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 SMART SM00028 98 131 81.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 SMART SM00028 179 212 3.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_1725 276e3a87d4ad2a88a4120bea82cd293d 376 Gene3D G3DSA:1.25.40.10 229 376 1.9E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1562 2811f157d2c77d9edd0cda5dc2239d1b 451 Pfam PF07670 Nucleoside recognition 135 229 4.1E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Amet_1664 04eaeb06f05b5ee7e85d75cdcaa8e46f 651 TIGRFAM TIGR01863 cas_Csd1: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG 5 636 3.5E-106 T 12-10-2018 IPR010144 CRISPR-associated protein, Csd1-type Amet_1664 04eaeb06f05b5ee7e85d75cdcaa8e46f 651 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 7 631 2.5E-137 T 12-10-2018 IPR010144 CRISPR-associated protein, Csd1-type Amet_2780 b9d3fca5681d56b7de85d1878cdf9bf7 249 Pfam PF13672 Protein phosphatase 2C 15 199 1.2E-16 T 12-10-2018 Amet_2780 b9d3fca5681d56b7de85d1878cdf9bf7 249 Gene3D G3DSA:3.60.40.10 1 242 3.2E-72 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_2780 b9d3fca5681d56b7de85d1878cdf9bf7 249 SMART SM00332 1 239 9.2E-30 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_2780 b9d3fca5681d56b7de85d1878cdf9bf7 249 SUPERFAMILY SSF81606 1 241 5.89E-69 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_2780 b9d3fca5681d56b7de85d1878cdf9bf7 249 SMART SM00331 7 241 1.3E-34 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_3374 1728b1ff748e0c003b3ac38abef6b188 226 PIRSF PIRSF037984 1 218 2.5E-83 T 12-10-2018 IPR017342 S-adenosyl-L-methionine dependent methionine synthase, predicted Amet_3374 1728b1ff748e0c003b3ac38abef6b188 226 Gene3D G3DSA:3.40.109.40 1 199 2.3E-65 T 12-10-2018 Amet_3374 1728b1ff748e0c003b3ac38abef6b188 226 SUPERFAMILY SSF56507 10 190 1.14E-31 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_3374 1728b1ff748e0c003b3ac38abef6b188 226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 123 188 7.8E-5 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_3957 d4c8fac0bc9859bf7a5ce5069ce1a7fc 71 Pfam PF06803 Protein of unknown function (DUF1232) 33 67 7.2E-10 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 Amet_3338 f31652a1305502550d0a2f48309bf69b 358 SUPERFAMILY SSF55920 133 358 5.23E-71 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like Amet_3338 f31652a1305502550d0a2f48309bf69b 358 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 287 299 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Amet_3338 f31652a1305502550d0a2f48309bf69b 358 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 130 6.7E-16 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Amet_3338 f31652a1305502550d0a2f48309bf69b 358 Gene3D G3DSA:3.40.350.10 1 131 7.4E-22 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amet_3338 f31652a1305502550d0a2f48309bf69b 358 Pfam PF00557 Metallopeptidase family M24 139 341 1.3E-62 T 12-10-2018 IPR000994 Peptidase M24 Amet_3338 f31652a1305502550d0a2f48309bf69b 358 Gene3D G3DSA:3.90.230.10 132 357 2.1E-76 T 12-10-2018 Amet_3338 f31652a1305502550d0a2f48309bf69b 358 SUPERFAMILY SSF53092 3 130 5.06E-14 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Amet_2142 853db718024e188bb7a585b38f326589 55 SUPERFAMILY SSF101478 3 51 1.31E-11 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amet_2142 853db718024e188bb7a585b38f326589 55 Gene3D G3DSA:1.10.4080.10 1 55 1.9E-14 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amet_2142 853db718024e188bb7a585b38f326589 55 Pfam PF03747 ADP-ribosylglycohydrolase 3 40 1.9E-8 T 12-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Amet_3454 adae051f29714e82bdb3fee51b374233 285 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 279 5.5E-91 T 12-10-2018 IPR003797 DegV Amet_3454 adae051f29714e82bdb3fee51b374233 285 Gene3D G3DSA:3.40.50.10170 1 154 1.4E-42 T 12-10-2018 Amet_3454 adae051f29714e82bdb3fee51b374233 285 Gene3D G3DSA:3.30.1180.10 155 281 4.0E-37 T 12-10-2018 Amet_3454 adae051f29714e82bdb3fee51b374233 285 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 280 2.0E-84 T 12-10-2018 IPR003797 DegV Amet_3454 adae051f29714e82bdb3fee51b374233 285 SUPERFAMILY SSF82549 1 281 1.73E-84 T 12-10-2018 Amet_4710 d5d6874ab78f4c5b3457f44bb91ebcdd 75 Gene3D G3DSA:3.30.110.40 1 73 2.9E-18 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_4710 d5d6874ab78f4c5b3457f44bb91ebcdd 75 Pfam PF01206 Sulfurtransferase TusA 5 73 1.1E-20 T 12-10-2018 IPR001455 TusA-like domain Amet_4710 d5d6874ab78f4c5b3457f44bb91ebcdd 75 SUPERFAMILY SSF64307 4 73 6.93E-20 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_1686 e156eb5b4349614c38e14014559a4862 91 Pfam PF01797 Transposase IS200 like 9 82 5.0E-7 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_1686 e156eb5b4349614c38e14014559a4862 91 SUPERFAMILY SSF143422 10 86 2.88E-9 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_1686 e156eb5b4349614c38e14014559a4862 91 Gene3D G3DSA:3.30.70.1290 2 91 1.3E-10 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0459 c14c834ff84814ca207e09a99b1b6b4c 311 Gene3D G3DSA:3.20.20.150 1 301 5.1E-62 T 12-10-2018 Amet_0459 c14c834ff84814ca207e09a99b1b6b4c 311 Pfam PF07582 AP endonuclease family 2 C terminus 260 284 5.6E-7 T 12-10-2018 IPR011418 AP endonuclease, family 2, C-terminal Amet_0459 c14c834ff84814ca207e09a99b1b6b4c 311 Pfam PF01261 Xylose isomerase-like TIM barrel 20 223 2.0E-34 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Amet_0459 c14c834ff84814ca207e09a99b1b6b4c 311 SUPERFAMILY SSF51658 1 308 1.17E-52 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily Amet_4513 89f5f9fef0c6731a1fd91f60fa925005 341 ProSitePatterns PS00112 Phosphagen kinase active site signature. 158 164 - T 12-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 Amet_4513 89f5f9fef0c6731a1fd91f60fa925005 341 Gene3D G3DSA:3.30.590.10 2 254 8.6E-78 T 12-10-2018 Amet_4513 89f5f9fef0c6731a1fd91f60fa925005 341 SUPERFAMILY SSF55931 2 259 9.25E-88 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Amet_4513 89f5f9fef0c6731a1fd91f60fa925005 341 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 43 244 2.3E-75 T 12-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 Amet_4513 89f5f9fef0c6731a1fd91f60fa925005 341 Hamap MF_00602 Protein-arginine kinase [mcsB]. 3 341 36.608 T 12-10-2018 IPR023660 Protein arginine kinase GO:0016775 Amet_3496 081a12f2ac7741b597afe18ed28ef359 198 Gene3D G3DSA:3.40.50.300 4 198 2.6E-81 T 12-10-2018 Amet_3496 081a12f2ac7741b597afe18ed28ef359 198 Pfam PF01583 Adenylylsulphate kinase 26 179 2.3E-71 T 12-10-2018 Amet_3496 081a12f2ac7741b597afe18ed28ef359 198 SUPERFAMILY SSF52540 25 193 1.94E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3496 081a12f2ac7741b597afe18ed28ef359 198 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 25 196 38.571 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Amet_3496 081a12f2ac7741b597afe18ed28ef359 198 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 9 192 1.4E-82 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Amet_0792 6fd65da7f35fad1c5840db5ed3a8cf91 149 Gene3D G3DSA:1.20.120.490 29 149 4.5E-31 T 12-10-2018 IPR024042 TM1646-like domain superfamily Amet_0792 6fd65da7f35fad1c5840db5ed3a8cf91 149 SUPERFAMILY SSF158397 31 149 7.06E-31 T 12-10-2018 IPR024042 TM1646-like domain superfamily Amet_0792 6fd65da7f35fad1c5840db5ed3a8cf91 149 Pfam PF03885 Protein of unknown function (DUF327) 16 148 1.6E-37 T 12-10-2018 IPR005585 Protein of unknown function DUF327 Amet_0955 e089242756baca647c51d24512ab2f46 332 SMART SM00909 82 174 9.2E-26 T 12-10-2018 IPR019606 GerMN domain Amet_0955 e089242756baca647c51d24512ab2f46 332 SMART SM00909 230 319 4.2E-18 T 12-10-2018 IPR019606 GerMN domain Amet_0955 e089242756baca647c51d24512ab2f46 332 Pfam PF10646 Sporulation and spore germination 59 170 1.2E-20 T 12-10-2018 IPR019606 GerMN domain Amet_0955 e089242756baca647c51d24512ab2f46 332 Pfam PF10646 Sporulation and spore germination 203 316 7.5E-12 T 12-10-2018 IPR019606 GerMN domain Amet_1652 919948a60f8816bcafcb33f01f2f3d04 237 Pfam PF02361 Cobalt transport protein 14 207 1.0E-18 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Amet_3821 7c78ac3b20789682984b68f3a00b5b53 247 Pfam PF01797 Transposase IS200 like 13 123 1.1E-14 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_3821 7c78ac3b20789682984b68f3a00b5b53 247 Gene3D G3DSA:3.30.70.1290 1 160 2.7E-43 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3821 7c78ac3b20789682984b68f3a00b5b53 247 SMART SM01321 9 123 1.6E-35 T 12-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Amet_3821 7c78ac3b20789682984b68f3a00b5b53 247 SUPERFAMILY SSF143422 1 128 2.09E-24 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3573 5d67f434eacf4791f070be05c472d289 103 Pfam PF06961 Protein of unknown function (DUF1294) 24 78 3.9E-21 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 Amet_3573 5d67f434eacf4791f070be05c472d289 103 PIRSF PIRSF002599 4 100 4.3E-9 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 Amet_2647 5306f67ba31576826861d53024cfd9a2 179 Gene3D G3DSA:1.10.260.40 2 68 4.3E-19 T 12-10-2018 Amet_2647 5306f67ba31576826861d53024cfd9a2 179 Pfam PF07883 Cupin domain 106 173 2.2E-17 T 12-10-2018 IPR013096 Cupin 2, conserved barrel Amet_2647 5306f67ba31576826861d53024cfd9a2 179 Gene3D G3DSA:2.60.120.10 69 174 1.8E-22 T 12-10-2018 IPR014710 RmlC-like jelly roll fold Amet_2647 5306f67ba31576826861d53024cfd9a2 179 Pfam PF12844 Helix-turn-helix domain 4 63 6.9E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2647 5306f67ba31576826861d53024cfd9a2 179 SUPERFAMILY SSF51182 54 179 2.18E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily Amet_2647 5306f67ba31576826861d53024cfd9a2 179 SUPERFAMILY SSF47413 2 66 1.32E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2647 5306f67ba31576826861d53024cfd9a2 179 SMART SM00530 6 61 7.6E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_3032 a03999ae766fb711258c3165758eb963 736 TIGRFAM TIGR00277 HDIG: HDIG domain 511 610 7.1E-24 T 12-10-2018 IPR006675 HDIG domain Amet_3032 a03999ae766fb711258c3165758eb963 736 Pfam PF07698 7TM receptor with intracellular HD hydrolase 307 489 7.2E-43 T 12-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain Amet_3032 a03999ae766fb711258c3165758eb963 736 Gene3D G3DSA:1.10.3210.10 448 705 3.5E-23 T 12-10-2018 Amet_3032 a03999ae766fb711258c3165758eb963 736 SMART SM00471 510 667 2.2E-9 T 12-10-2018 IPR003607 HD/PDEase domain Amet_3032 a03999ae766fb711258c3165758eb963 736 SUPERFAMILY SSF109604 513 711 1.67E-15 T 12-10-2018 Amet_3032 a03999ae766fb711258c3165758eb963 736 Pfam PF07697 7TM-HD extracellular 55 296 6.4E-34 T 12-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain Amet_3032 a03999ae766fb711258c3165758eb963 736 Pfam PF01966 HD domain 514 657 4.3E-16 T 12-10-2018 IPR006674 HD domain Amet_4470 706ced4d16a4629271f7169b34585ba9 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 3.9E-27 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4470 706ced4d16a4629271f7169b34585ba9 67 Pfam PF00831 Ribosomal L29 protein 4 59 2.6E-28 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4470 706ced4d16a4629271f7169b34585ba9 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.495 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4470 706ced4d16a4629271f7169b34585ba9 67 Gene3D G3DSA:1.10.287.310 1 67 3.3E-31 T 12-10-2018 Amet_4470 706ced4d16a4629271f7169b34585ba9 67 SUPERFAMILY SSF46561 1 62 2.22E-24 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_4470 706ced4d16a4629271f7169b34585ba9 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Amet_0049 227e8546291c0cac1f4f8c0de75d90bd 158 Gene3D G3DSA:3.30.70.3460 29 158 1.0E-43 T 12-10-2018 Amet_0741 a4dde5243fe5148be44fb4dd95388b7d 58 Pfam PF14070 Putative motility protein 3 57 4.7E-22 T 12-10-2018 IPR025906 Putative motility protein Amet_3078 99985f7b0fe4c1ef1ff5e14cfc525f9b 841 Pfam PF02687 FtsX-like permease family 741 833 4.6E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_3078 99985f7b0fe4c1ef1ff5e14cfc525f9b 841 Pfam PF02687 FtsX-like permease family 293 385 1.3E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_3078 99985f7b0fe4c1ef1ff5e14cfc525f9b 841 Pfam PF12704 MacB-like periplasmic core domain 19 234 5.5E-7 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Amet_3078 99985f7b0fe4c1ef1ff5e14cfc525f9b 841 Pfam PF12704 MacB-like periplasmic core domain 487 684 2.2E-6 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Amet_4055 df6ac1e3af703593031d7881509426ce 250 Pfam PF01863 Protein of unknown function DUF45 21 228 4.7E-58 T 12-10-2018 IPR002725 Protein of unknown function DUF45 Amet_4055 df6ac1e3af703593031d7881509426ce 250 Gene3D G3DSA:3.30.2010.10 137 233 4.1E-16 T 12-10-2018 Amet_1205 f8ae7942fe3d2c12452e0cec9a5b0cd9 222 Gene3D G3DSA:3.30.70.260 149 221 7.3E-6 T 12-10-2018 Amet_1205 f8ae7942fe3d2c12452e0cec9a5b0cd9 222 PRINTS PR01837 MgtC/SapB protein signature 33 51 4.4E-44 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_1205 f8ae7942fe3d2c12452e0cec9a5b0cd9 222 PRINTS PR01837 MgtC/SapB protein signature 65 87 4.4E-44 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_1205 f8ae7942fe3d2c12452e0cec9a5b0cd9 222 PRINTS PR01837 MgtC/SapB protein signature 14 33 4.4E-44 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_1205 f8ae7942fe3d2c12452e0cec9a5b0cd9 222 PRINTS PR01837 MgtC/SapB protein signature 92 116 4.4E-44 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_1205 f8ae7942fe3d2c12452e0cec9a5b0cd9 222 SUPERFAMILY SSF55021 146 201 1.73E-7 T 12-10-2018 Amet_1205 f8ae7942fe3d2c12452e0cec9a5b0cd9 222 Pfam PF02308 MgtC family 11 137 1.7E-36 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_0868 d73ab35b9928954da35d2857c60cff29 344 Gene3D G3DSA:2.70.40.10 3 139 3.1E-17 T 12-10-2018 IPR036157 dUTPase-like superfamily Amet_0868 d73ab35b9928954da35d2857c60cff29 344 SUPERFAMILY SSF51283 9 134 3.66E-18 T 12-10-2018 IPR036157 dUTPase-like superfamily Amet_1163 6f72eb9690e65cc175a589338f50b67f 486 Pfam PF05598 Transposase domain (DUF772) 56 126 1.4E-9 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_2731 6f72eb9690e65cc175a589338f50b67f 486 Pfam PF05598 Transposase domain (DUF772) 56 126 1.4E-9 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_3178 6f72eb9690e65cc175a589338f50b67f 486 Pfam PF05598 Transposase domain (DUF772) 56 126 1.4E-9 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_3838 9e182227432716a6db97019ec5c2cf51 99 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 6 53 1.0E-19 T 12-10-2018 Amet_3838 9e182227432716a6db97019ec5c2cf51 99 Gene3D G3DSA:3.30.70.1710 2 99 1.4E-34 T 12-10-2018 Amet_3838 9e182227432716a6db97019ec5c2cf51 99 Pfam PF00936 BMC domain 8 83 1.4E-26 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3838 9e182227432716a6db97019ec5c2cf51 99 SMART SM00877 7 83 4.2E-33 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_3838 9e182227432716a6db97019ec5c2cf51 99 SUPERFAMILY SSF143414 7 94 1.57E-27 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_2718 2661a87820967051c069d2a09e6ca6f2 134 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 74 7.8E-25 T 12-10-2018 IPR005648 Flagellar hook capping protein Amet_2011 878bf2e0b8dc77c09dbfbb4f4b96cbde 382 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 212 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Amet_2011 878bf2e0b8dc77c09dbfbb4f4b96cbde 382 Gene3D G3DSA:3.90.1150.10 3 372 1.4E-117 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_2011 878bf2e0b8dc77c09dbfbb4f4b96cbde 382 SUPERFAMILY SSF53383 3 378 5.79E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2011 878bf2e0b8dc77c09dbfbb4f4b96cbde 382 PIRSF PIRSF005572 1 382 1.2E-59 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Amet_2011 878bf2e0b8dc77c09dbfbb4f4b96cbde 382 Pfam PF00266 Aminotransferase class-V 3 371 1.5E-90 T 12-10-2018 IPR000192 Aminotransferase class V domain Amet_2011 878bf2e0b8dc77c09dbfbb4f4b96cbde 382 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 3 378 5.2E-145 T 12-10-2018 IPR010969 Cysteine desulfurase-related, unknown function Amet_2011 878bf2e0b8dc77c09dbfbb4f4b96cbde 382 Gene3D G3DSA:3.40.640.10 17 268 1.4E-117 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_3601 4a17c8bf3e3e6dcb59fc65883cf3bc52 99 TIGRFAM TIGR02271 TIGR02271: conserved domain 1 85 6.0E-22 T 12-10-2018 IPR019060 Domain of unknown function DUF2382 Amet_3601 4a17c8bf3e3e6dcb59fc65883cf3bc52 99 Pfam PF09557 Domain of unknown function (DUF2382) 1 80 1.0E-14 T 12-10-2018 IPR019060 Domain of unknown function DUF2382 Amet_0944 c1a0b15960ac6c321a9616a0ced3938d 226 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 2 213 1.2E-30 T 12-10-2018 IPR010178 Integral membrane protein 1906 Amet_0944 c1a0b15960ac6c321a9616a0ced3938d 226 Pfam PF07314 Protein of unknown function (DUF1461) 9 193 4.7E-45 T 12-10-2018 IPR010178 Integral membrane protein 1906 Amet_4116 da6f6a848648c14cf7e7461e8a8acb86 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 250 5.7E-10 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Amet_4116 da6f6a848648c14cf7e7461e8a8acb86 257 Gene3D G3DSA:3.40.50.300 1 251 7.0E-65 T 12-10-2018 Amet_4116 da6f6a848648c14cf7e7461e8a8acb86 257 Pfam PF00005 ABC transporter 19 179 2.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4116 da6f6a848648c14cf7e7461e8a8acb86 257 SUPERFAMILY SSF52540 3 250 1.11E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4116 da6f6a848648c14cf7e7461e8a8acb86 257 SMART SM00382 28 227 1.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1069 9ebb0fe34458be1e51e2ba3d6d775931 174 Pfam PF02417 Chromate transporter 5 169 1.5E-46 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Amet_4404 4217c2106024fed5878bdd008cd3adda 395 Gene3D G3DSA:1.20.1530.20 1 386 1.1E-25 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Amet_4404 4217c2106024fed5878bdd008cd3adda 395 Pfam PF00999 Sodium/hydrogen exchanger family 7 383 1.1E-36 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amet_1117 c40644f6d77ee038743df7a9c8018200 309 SUPERFAMILY SSF161098 94 292 8.37E-19 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1117 c40644f6d77ee038743df7a9c8018200 309 Gene3D G3DSA:1.10.3720.10 89 299 5.3E-21 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1117 c40644f6d77ee038743df7a9c8018200 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 306 1.7E-33 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_3532 80f7383b243469364251149a1d30634f 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 155 1.6E-32 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Amet_0824 5a9cd5b53d7884f11747f063e90c4c51 560 Pfam PF16949 Putative ATP-binding cassette 41 509 8.5E-17 T 12-10-2018 IPR031599 Putative ATP-binding cassette Amet_2075 037f5734ab46315eda0df98025ff3b89 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 276 1.2E-39 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_3942 37b5a20e86d6886de5e0c73a593f3743 292 SMART SM00382 30 208 7.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3942 37b5a20e86d6886de5e0c73a593f3743 292 Pfam PF00005 ABC transporter 21 156 7.6E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3942 37b5a20e86d6886de5e0c73a593f3743 292 Gene3D G3DSA:3.40.50.300 1 266 7.4E-41 T 12-10-2018 Amet_3942 37b5a20e86d6886de5e0c73a593f3743 292 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3942 37b5a20e86d6886de5e0c73a593f3743 292 SUPERFAMILY SSF52540 3 222 1.65E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0202 7d7b212e30d80b46f1b3aa71bd404f7e 592 Gene3D G3DSA:2.70.98.70 334 582 3.0E-35 T 12-10-2018 Amet_0202 7d7b212e30d80b46f1b3aa71bd404f7e 592 Gene3D G3DSA:1.50.10.100 45 333 6.5E-55 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Amet_0202 7d7b212e30d80b46f1b3aa71bd404f7e 592 Pfam PF16889 Heparinase II/III N-terminus 91 311 1.6E-19 T 12-10-2018 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 Amet_0202 7d7b212e30d80b46f1b3aa71bd404f7e 592 Pfam PF07940 Heparinase II/III-like protein 335 546 2.7E-56 T 12-10-2018 IPR012480 Heparinase II/III-like GO:0016829 Amet_0202 7d7b212e30d80b46f1b3aa71bd404f7e 592 SUPERFAMILY SSF48230 91 317 9.15E-35 T 12-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Amet_3167 07a4d7e1e2621fe871f12cbdac58277c 147 Pfam PF03473 MOSC domain 36 140 1.5E-5 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Amet_3167 07a4d7e1e2621fe871f12cbdac58277c 147 Gene3D G3DSA:2.40.33.20 1 147 8.7E-37 T 12-10-2018 Amet_3167 07a4d7e1e2621fe871f12cbdac58277c 147 SUPERFAMILY SSF50800 1 145 5.23E-41 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Amet_4019 e00411585f889e6f267af704e3371d7a 756 SUPERFAMILY SSF48371 381 622 1.5E-13 T 12-10-2018 IPR016024 Armadillo-type fold Amet_4019 e00411585f889e6f267af704e3371d7a 756 SUPERFAMILY SSF57997 36 257 6.47E-7 T 12-10-2018 Amet_2388 8fa3a392c7135437dcd87110cd8fdd78 97 Pfam PF01381 Helix-turn-helix 35 80 2.0E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2388 8fa3a392c7135437dcd87110cd8fdd78 97 Gene3D G3DSA:1.10.260.40 24 95 2.0E-8 T 12-10-2018 Amet_2388 8fa3a392c7135437dcd87110cd8fdd78 97 SUPERFAMILY SSF47413 24 91 8.19E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_3644 53af63bc4152a35cb13c066b768fb63b 144 SUPERFAMILY SSF54631 1 117 3.92E-33 T 12-10-2018 Amet_3644 53af63bc4152a35cb13c066b768fb63b 144 Pfam PF00571 CBS domain 69 118 4.4E-12 T 12-10-2018 IPR000644 CBS domain Amet_3644 53af63bc4152a35cb13c066b768fb63b 144 Pfam PF00571 CBS domain 3 54 2.1E-10 T 12-10-2018 IPR000644 CBS domain Amet_3644 53af63bc4152a35cb13c066b768fb63b 144 SMART SM00116 75 122 8.0E-11 T 12-10-2018 IPR000644 CBS domain Amet_3644 53af63bc4152a35cb13c066b768fb63b 144 SMART SM00116 10 58 1.2E-4 T 12-10-2018 IPR000644 CBS domain Amet_3644 53af63bc4152a35cb13c066b768fb63b 144 Gene3D G3DSA:3.10.580.10 1 121 3.0E-38 T 12-10-2018 Amet_0755 752bd2ff571651dd6f84814324363a5f 123 SUPERFAMILY SSF81301 4 116 1.46E-20 T 12-10-2018 Amet_0755 752bd2ff571651dd6f84814324363a5f 123 Pfam PF01909 Nucleotidyltransferase domain 16 83 7.5E-12 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Amet_0755 752bd2ff571651dd6f84814324363a5f 123 Gene3D G3DSA:3.30.460.10 3 104 5.0E-19 T 12-10-2018 Amet_1144 1d4215550d5e16b268a4caa59f793f42 99 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 8 94 3.5E-21 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Amet_1144 1d4215550d5e16b268a4caa59f793f42 99 Pfam PF03334 Na+/H+ antiporter subunit 8 87 8.8E-22 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 Amet_4788 f38330f0bf8ca9fe571e40cbe111045d 182 Pfam PF14584 Protein of unknown function (DUF4446) 14 162 3.7E-53 T 12-10-2018 IPR027981 Protein of unknown function DUF4446 Amet_2025 4cd78d1c7ae951e5ea7accab40096488 314 Gene3D G3DSA:3.20.20.20 15 314 2.1E-106 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Amet_2025 4cd78d1c7ae951e5ea7accab40096488 314 Pfam PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit 16 259 2.8E-44 T 12-10-2018 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel Amet_2622 0299c518fda585af9f572bf9800b537f 350 Gene3D G3DSA:2.40.30.40 70 159 4.3E-119 T 12-10-2018 IPR023367 Peptidase M42, domain 2 Amet_2622 0299c518fda585af9f572bf9800b537f 350 Pfam PF05343 M42 glutamyl aminopeptidase 44 331 3.3E-92 T 12-10-2018 IPR008007 Peptidase M42 Amet_2622 0299c518fda585af9f572bf9800b537f 350 SUPERFAMILY SSF101821 70 175 2.29E-23 T 12-10-2018 Amet_2622 0299c518fda585af9f572bf9800b537f 350 Gene3D G3DSA:3.40.630.10 9 334 4.3E-119 T 12-10-2018 Amet_2622 0299c518fda585af9f572bf9800b537f 350 PIRSF PIRSF001123 1 350 1.9E-112 T 12-10-2018 IPR008007 Peptidase M42 Amet_2622 0299c518fda585af9f572bf9800b537f 350 SUPERFAMILY SSF53187 1 338 3.52E-66 T 12-10-2018 Amet_2313 46425ae7aa2c68f1a1eecff74998694d 122 Gene3D G3DSA:3.30.460.10 1 110 1.3E-39 T 12-10-2018 Amet_2313 46425ae7aa2c68f1a1eecff74998694d 122 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 107 25.018 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Amet_2313 46425ae7aa2c68f1a1eecff74998694d 122 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 106 2.0E-37 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Amet_2313 46425ae7aa2c68f1a1eecff74998694d 122 Pfam PF02410 Ribosomal silencing factor during starvation 11 106 1.7E-29 T 12-10-2018 Amet_2313 46425ae7aa2c68f1a1eecff74998694d 122 SUPERFAMILY SSF81301 6 118 7.36E-40 T 12-10-2018 Amet_3132 bbcf7df2c0279eb08175bfcaa4aae46f 149 SUPERFAMILY SSF54611 10 141 8.07E-10 T 12-10-2018 IPR035958 SecB-like superfamily Amet_1496 daba2530b2f49ba66adc8e720beb725c 211 Pfam PF03358 NADPH-dependent FMN reductase 1 156 5.0E-28 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Amet_1496 daba2530b2f49ba66adc8e720beb725c 211 SUPERFAMILY SSF52218 1 191 9.35E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1496 daba2530b2f49ba66adc8e720beb725c 211 Gene3D G3DSA:3.40.50.360 1 203 2.9E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 Gene3D G3DSA:1.10.10.10 1 60 8.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 209 3.0E-17 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 Pfam PF08279 HTH domain 4 56 2.2E-16 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 4 320 34.021 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 Gene3D G3DSA:2.30.30.100 274 321 6.1E-9 T 12-10-2018 Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 SUPERFAMILY SSF50037 276 320 3.3E-5 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 Pfam PF02237 Biotin protein ligase C terminal domain 274 320 1.0E-5 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 319 1.9E-58 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 SUPERFAMILY SSF46785 4 58 4.37E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 SUPERFAMILY SSF55681 71 258 1.24E-57 T 12-10-2018 Amet_4534 c871ebc4e04bfc087a1cd1f3313beaff 326 Gene3D G3DSA:3.30.930.10 68 270 1.2E-61 T 12-10-2018 Amet_0336 00b6c568da88a5eef64c41d868a79f09 356 Gene3D G3DSA:3.40.50.11030 222 356 2.7E-39 T 12-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Amet_0336 00b6c568da88a5eef64c41d868a79f09 356 SUPERFAMILY SSF55821 21 215 1.37E-62 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Amet_0336 00b6c568da88a5eef64c41d868a79f09 356 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 18 213 4.7E-66 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Amet_0336 00b6c568da88a5eef64c41d868a79f09 356 Gene3D G3DSA:3.90.870.10 3 218 3.9E-82 T 12-10-2018 Amet_0336 00b6c568da88a5eef64c41d868a79f09 356 PIRSF PIRSF004930 2 356 2.9E-127 T 12-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Amet_0336 00b6c568da88a5eef64c41d868a79f09 356 Pfam PF01300 Telomere recombination 26 202 3.9E-58 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 Amet_0336 00b6c568da88a5eef64c41d868a79f09 356 Pfam PF03481 Putative GTP-binding controlling metal-binding 204 350 1.3E-28 T 12-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain Amet_1182 a50d28e6fdf583651342da6f9fcb2ddf 189 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 2 178 9.2E-36 T 12-10-2018 IPR030949 ECF transporter S component, folate family Amet_1182 a50d28e6fdf583651342da6f9fcb2ddf 189 Gene3D G3DSA:1.10.1760.20 3 188 2.4E-42 T 12-10-2018 Amet_1182 a50d28e6fdf583651342da6f9fcb2ddf 189 Pfam PF07155 ECF-type riboflavin transporter, S component 2 169 6.5E-26 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 Amet_3941 505d553be6578056ad0f3a2b4f48e318 121 SUPERFAMILY SSF46785 5 77 2.72E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3941 505d553be6578056ad0f3a2b4f48e318 121 Gene3D G3DSA:1.10.10.10 7 120 4.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3941 505d553be6578056ad0f3a2b4f48e318 121 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 1.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_3941 505d553be6578056ad0f3a2b4f48e318 121 SMART SM00345 14 73 2.7E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Amet_1035 729080b66a1172c45d22b668069dc10d 274 Pfam PF02517 CAAX protease self-immunity 125 209 1.9E-12 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_0217 63318a85b76ccca1b1959d88c8a7f36f 304 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 83 231 2.9E-36 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amet_0217 63318a85b76ccca1b1959d88c8a7f36f 304 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 83 231 1.3E-42 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Amet_0217 63318a85b76ccca1b1959d88c8a7f36f 304 Gene3D G3DSA:1.10.260.150 41 304 8.4E-75 T 12-10-2018 Amet_1821 781ac112fde1039ff09bc9884b0609ef 133 Pfam PF13789 Domain of unknown function (DUF4181) 13 104 6.9E-14 T 12-10-2018 IPR025441 Protein of unknown function DUF4181 Amet_2537 288ca43cd213f2a00dcda9d185ced5cf 426 SUPERFAMILY SSF53383 47 375 9.07E-43 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_2537 288ca43cd213f2a00dcda9d185ced5cf 426 Gene3D G3DSA:3.40.640.10 66 278 3.1E-173 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_2537 288ca43cd213f2a00dcda9d185ced5cf 426 Pfam PF06838 Methionine gamma-lyase 23 421 9.5E-180 T 12-10-2018 IPR009651 Putative methionine gamma-lyase Amet_2537 288ca43cd213f2a00dcda9d185ced5cf 426 Gene3D G3DSA:3.90.1150.60 26 417 3.1E-173 T 12-10-2018 Amet_3852 eacf30e85cf1885164fcc786eebb7c9d 491 Pfam PF00753 Metallo-beta-lactamase superfamily 261 466 2.3E-25 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3852 eacf30e85cf1885164fcc786eebb7c9d 491 Gene3D G3DSA:3.60.15.10 230 487 8.0E-46 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_3852 eacf30e85cf1885164fcc786eebb7c9d 491 SMART SM00849 263 466 1.5E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase Amet_3852 eacf30e85cf1885164fcc786eebb7c9d 491 SUPERFAMILY SSF56281 258 471 1.04E-39 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Amet_3028 e748315e88e916feb97a91bdc447ea1b 349 Gene3D G3DSA:3.50.90.10 44 349 2.8E-97 T 12-10-2018 IPR023158 YerB-like superfamily Amet_3028 e748315e88e916feb97a91bdc447ea1b 349 SUPERFAMILY SSF159774 56 347 3.01E-93 T 12-10-2018 IPR023158 YerB-like superfamily Amet_3028 e748315e88e916feb97a91bdc447ea1b 349 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 226 336 8.8E-32 T 12-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain Amet_3028 e748315e88e916feb97a91bdc447ea1b 349 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 58 200 1.6E-43 T 12-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal Amet_3104 5394563888029ee592ada74e6e533313 321 SUPERFAMILY SSF117892 101 217 1.96E-17 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Amet_3104 5394563888029ee592ada74e6e533313 321 TIGRFAM TIGR01933 hflK: HflK protein 30 310 1.7E-80 T 12-10-2018 IPR010201 HflK GO:0016021 Amet_3104 5394563888029ee592ada74e6e533313 321 SMART SM00244 28 211 9.8E-27 T 12-10-2018 IPR001107 Band 7 domain Amet_3104 5394563888029ee592ada74e6e533313 321 Gene3D G3DSA:3.30.479.30 90 200 4.6E-17 T 12-10-2018 Amet_3104 5394563888029ee592ada74e6e533313 321 Pfam PF01145 SPFH domain / Band 7 family 34 226 9.5E-21 T 12-10-2018 IPR001107 Band 7 domain Amet_0789 c18f038d95d8ad1264e6f62a3df6ca4c 203 Pfam PF17248 Family of unknown function (DUF5317) 28 176 4.2E-33 T 12-10-2018 IPR035168 Protein of unknown function DUF5317 Amet_0083 d72536be1ef0f035f77398f40e2589ee 109 Pfam PF06153 Cyclic-di-AMP receptor 1 108 2.7E-48 T 12-10-2018 IPR010375 Cyclic-di-AMP receptor Amet_0083 d72536be1ef0f035f77398f40e2589ee 109 SUPERFAMILY SSF54913 1 107 1.08E-11 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amet_0083 d72536be1ef0f035f77398f40e2589ee 109 Gene3D G3DSA:3.30.70.120 1 103 5.0E-41 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amet_1156 9649b22e80e6c9478dd33930c2b5ed65 281 SMART SM00382 56 254 9.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1156 9649b22e80e6c9478dd33930c2b5ed65 281 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1156 9649b22e80e6c9478dd33930c2b5ed65 281 Pfam PF00005 ABC transporter 48 204 1.0E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1156 9649b22e80e6c9478dd33930c2b5ed65 281 PIRSF PIRSF037116 28 281 1.2E-80 T 12-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK Amet_1156 9649b22e80e6c9478dd33930c2b5ed65 281 PIRSF PIRSF037116 2 32 27.0 T 12-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK Amet_1156 9649b22e80e6c9478dd33930c2b5ed65 281 SUPERFAMILY SSF52540 31 276 4.07E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1156 9649b22e80e6c9478dd33930c2b5ed65 281 Gene3D G3DSA:3.40.50.300 29 281 2.0E-63 T 12-10-2018 Amet_4705 d41da6af3d7ae59a5083a4e90740d038 659 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 40 645 6.5E-235 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Amet_4705 d41da6af3d7ae59a5083a4e90740d038 659 Pfam PF11874 Domain of unknown function (DUF3394) 577 625 3.7E-9 T 12-10-2018 IPR021814 Protein of unknown function DUF3394 Amet_4705 d41da6af3d7ae59a5083a4e90740d038 659 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 137 573 1.3E-99 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_2675 ebca9a469a7333856bf7b805e9c9edb5 92 Gene3D G3DSA:3.30.1230.10 1 92 2.1E-35 T 12-10-2018 IPR035931 YlxR-like superfamily Amet_2675 ebca9a469a7333856bf7b805e9c9edb5 92 SUPERFAMILY SSF64376 4 88 7.06E-28 T 12-10-2018 IPR035931 YlxR-like superfamily Amet_2675 ebca9a469a7333856bf7b805e9c9edb5 92 Pfam PF04296 Protein of unknown function (DUF448) 9 81 8.7E-29 T 12-10-2018 IPR007393 Domain of unknown function DUF448 Amet_0611 c0b9dcb5fad58cf7a8a8fe9636e11596 138 Pfam PF03748 Flagellar basal body-associated protein FliL 45 138 1.2E-14 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Amet_2812 5dfb89d5fa8217052aaa236f27f3a36d 401 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 390 6.5E-36 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_3226 0fcd530637d68c6d55338ae5ddfb85a4 446 Pfam PF03390 2-hydroxycarboxylate transporter family 22 440 1.0E-148 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 Amet_3226 0fcd530637d68c6d55338ae5ddfb85a4 446 PIRSF PIRSF005348 1 446 1.5E-167 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 Amet_1444 a49e0e4ff83d9ca1b0d1ccbc3b667f12 282 Gene3D G3DSA:3.30.1380.10 131 277 2.2E-19 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_1444 a49e0e4ff83d9ca1b0d1ccbc3b667f12 282 SUPERFAMILY SSF55166 126 277 1.37E-26 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_1444 a49e0e4ff83d9ca1b0d1ccbc3b667f12 282 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 199 278 2.9E-21 T 12-10-2018 IPR039561 Peptidase M15C GO:0008233 Amet_0946 ed3df62b620e4a8c87ad8fa72a6b7ef4 71 Pfam PF04023 FeoA domain 22 68 1.5E-10 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Amet_0946 ed3df62b620e4a8c87ad8fa72a6b7ef4 71 SMART SM00899 1 69 4.9E-12 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Amet_0946 ed3df62b620e4a8c87ad8fa72a6b7ef4 71 SUPERFAMILY SSF50037 19 68 4.81E-11 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal Amet_0946 ed3df62b620e4a8c87ad8fa72a6b7ef4 71 Gene3D G3DSA:2.30.30.90 19 68 1.9E-12 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain Amet_2095 eb81950b795ec0a2fdf1021449ccf226 391 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 189 386 1.1E-9 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Amet_2095 eb81950b795ec0a2fdf1021449ccf226 391 SUPERFAMILY SSF51726 16 388 1.12E-38 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amet_2095 eb81950b795ec0a2fdf1021449ccf226 391 Gene3D G3DSA:3.20.20.210 13 388 1.6E-29 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amet_2152 037581711638b302eded42267c4a5c1a 1081 Gene3D G3DSA:3.40.50.300 2 168 2.3E-12 T 12-10-2018 Amet_2152 037581711638b302eded42267c4a5c1a 1081 Gene3D G3DSA:3.40.50.300 770 1074 6.9E-9 T 12-10-2018 Amet_2152 037581711638b302eded42267c4a5c1a 1081 Pfam PF13555 P-loop containing region of AAA domain 4 60 1.1E-20 T 12-10-2018 Amet_2152 037581711638b302eded42267c4a5c1a 1081 Pfam PF13558 Putative exonuclease SbcCD, C subunit 949 1035 1.4E-24 T 12-10-2018 Amet_2152 037581711638b302eded42267c4a5c1a 1081 SUPERFAMILY SSF52540 4 1045 2.29E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4728 961328c8882fb3a07c129350d48c3c39 313 SUPERFAMILY SSF103481 198 296 1.96E-11 T 12-10-2018 Amet_4728 961328c8882fb3a07c129350d48c3c39 313 Pfam PF00892 EamA-like transporter family 157 293 1.5E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_4728 961328c8882fb3a07c129350d48c3c39 313 Pfam PF00892 EamA-like transporter family 12 142 9.1E-20 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_4728 961328c8882fb3a07c129350d48c3c39 313 SUPERFAMILY SSF103481 42 144 4.84E-11 T 12-10-2018 Amet_2563 8a394be979706a107efe6bd4960f3ac4 216 SUPERFAMILY SSF54106 164 215 5.49E-8 T 12-10-2018 Amet_2563 8a394be979706a107efe6bd4960f3ac4 216 Pfam PF01476 LysM domain 166 215 4.6E-11 T 12-10-2018 IPR018392 LysM domain Amet_2563 8a394be979706a107efe6bd4960f3ac4 216 SMART SM00257 165 215 5.9E-8 T 12-10-2018 IPR018392 LysM domain Amet_2563 8a394be979706a107efe6bd4960f3ac4 216 Gene3D G3DSA:3.10.350.10 165 213 5.2E-14 T 12-10-2018 IPR036779 LysM domain superfamily Amet_0627 f5cb0a7dcaa03689c39db072c349b543 42 TIGRFAM TIGR04223 quorum_AgrD: cyclic lactone autoinducer peptide 7 37 5.4E-6 T 12-10-2018 IPR009229 Staphylococcal AgrD Amet_1415 05731a0c8b121b70647bb4a1c8a8d808 172 Pfam PF04191 Phospholipid methyltransferase 93 161 1.1E-10 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Amet_1415 05731a0c8b121b70647bb4a1c8a8d808 172 Gene3D G3DSA:1.20.120.1630 3 172 1.6E-17 T 12-10-2018 Amet_0771 ddd986dc205c73954ddeb67addbff411 284 Gene3D G3DSA:1.10.3210.10 1 277 7.7E-81 T 12-10-2018 Amet_0771 ddd986dc205c73954ddeb67addbff411 284 TIGRFAM TIGR00277 HDIG: HDIG domain 119 211 6.1E-8 T 12-10-2018 IPR006675 HDIG domain Amet_0771 ddd986dc205c73954ddeb67addbff411 284 SUPERFAMILY SSF109604 6 273 2.13E-74 T 12-10-2018 Amet_0771 ddd986dc205c73954ddeb67addbff411 284 Pfam PF08668 HDOD domain 18 213 7.3E-67 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD Amet_3508 a7675b957f0f469b70e9b9501142b0a7 110 Pfam PF13280 WYL domain 1 106 1.5E-10 T 12-10-2018 IPR026881 WYL domain Amet_3510 6d68a71396ee1f33851e6aa7d068e434 350 Pfam PF01212 Beta-eliminating lyase 21 293 9.9E-37 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Amet_3510 6d68a71396ee1f33851e6aa7d068e434 350 SUPERFAMILY SSF53383 8 346 2.26E-83 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Amet_3510 6d68a71396ee1f33851e6aa7d068e434 350 Gene3D G3DSA:3.90.1150.10 12 338 8.5E-119 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Amet_3510 6d68a71396ee1f33851e6aa7d068e434 350 Gene3D G3DSA:3.40.640.10 19 256 8.5E-119 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Amet_1116 4bd83dcce82949c2d870e896b0fc8e83 143 Pfam PF00258 Flavodoxin 6 135 2.2E-20 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Amet_1116 4bd83dcce82949c2d870e896b0fc8e83 143 Gene3D G3DSA:3.40.50.360 1 143 1.1E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1116 4bd83dcce82949c2d870e896b0fc8e83 143 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Amet_1116 4bd83dcce82949c2d870e896b0fc8e83 143 SUPERFAMILY SSF52218 3 141 3.77E-40 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1116 4bd83dcce82949c2d870e896b0fc8e83 143 TIGRFAM TIGR01753 flav_short: flavodoxin 4 141 1.6E-51 T 12-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 Amet_0822 f431ed6c93152d6eb8d0dc3ef4a75ed9 123 Pfam PF01910 Thiamine-binding protein 28 120 3.9E-33 T 12-10-2018 IPR002767 Thiamine-binding protein Amet_0822 f431ed6c93152d6eb8d0dc3ef4a75ed9 123 Gene3D G3DSA:3.30.70.930 22 123 2.7E-37 T 12-10-2018 IPR029756 MTH1187/YkoF-like Amet_0822 f431ed6c93152d6eb8d0dc3ef4a75ed9 123 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 27 123 2.2E-30 T 12-10-2018 IPR002767 Thiamine-binding protein Amet_0822 f431ed6c93152d6eb8d0dc3ef4a75ed9 123 SUPERFAMILY SSF89957 25 123 1.09E-30 T 12-10-2018 IPR029756 MTH1187/YkoF-like Amet_2316 8d2871f1fd9baf599cefd682da1e2f5f 126 SUPERFAMILY SSF55298 2 125 9.27E-52 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amet_2316 8d2871f1fd9baf599cefd682da1e2f5f 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 1.1E-58 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Amet_2316 8d2871f1fd9baf599cefd682da1e2f5f 126 Pfam PF01042 Endoribonuclease L-PSP 7 125 1.0E-49 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Amet_2316 8d2871f1fd9baf599cefd682da1e2f5f 126 Gene3D G3DSA:3.30.1330.40 1 126 4.7E-59 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Amet_2316 8d2871f1fd9baf599cefd682da1e2f5f 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Amet_1249 13dcfdb6d3e900b69091488873aa7ef4 266 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 7.3E-101 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Amet_1249 13dcfdb6d3e900b69091488873aa7ef4 266 Gene3D G3DSA:3.40.1190.20 1 263 1.3E-107 T 12-10-2018 IPR029056 Ribokinase-like Amet_1249 13dcfdb6d3e900b69091488873aa7ef4 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 256 5.1E-108 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1249 13dcfdb6d3e900b69091488873aa7ef4 266 SUPERFAMILY SSF53613 1 259 9.04E-87 T 12-10-2018 IPR029056 Ribokinase-like Amet_2708 9a2ad2cbc75ee225bbc2851f7d51473d 135 Pfam PF04347 Flagellar biosynthesis protein, FliO 29 115 8.9E-6 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Amet_3529 2986a96822531bdf247cb0745465b019 374 Gene3D G3DSA:3.30.420.40 9 361 4.9E-23 T 12-10-2018 Amet_3529 2986a96822531bdf247cb0745465b019 374 SUPERFAMILY SSF53067 205 365 3.63E-15 T 12-10-2018 Amet_3529 2986a96822531bdf247cb0745465b019 374 Gene3D G3DSA:3.30.420.40 203 348 4.9E-23 T 12-10-2018 Amet_0260 c1e39531790fa9a235ee41d6a579e35d 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 6 49 1.0E-16 T 12-10-2018 Amet_0260 c1e39531790fa9a235ee41d6a579e35d 94 Pfam PF00936 BMC domain 6 81 1.0E-28 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0260 c1e39531790fa9a235ee41d6a579e35d 94 SMART SM00877 5 81 1.4E-35 T 12-10-2018 IPR000249 Microcompartment protein, bacteria Amet_0260 c1e39531790fa9a235ee41d6a579e35d 94 Gene3D G3DSA:3.30.70.1710 1 94 6.3E-41 T 12-10-2018 Amet_0260 c1e39531790fa9a235ee41d6a579e35d 94 SUPERFAMILY SSF143414 5 90 1.57E-32 T 12-10-2018 IPR037233 CcmK-like superfamily Amet_0260 c1e39531790fa9a235ee41d6a579e35d 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 23 42 - T 12-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Amet_3912 02746095efa2168f6dc30ec5af4bd733 189 Gene3D G3DSA:1.10.10.10 1 97 3.4E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3912 02746095efa2168f6dc30ec5af4bd733 189 SUPERFAMILY SSF46785 3 171 1.9E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3912 02746095efa2168f6dc30ec5af4bd733 189 Pfam PF03551 Transcriptional regulator PadR-like family 6 80 2.9E-10 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amet_1614 afb32f78ae1eb8588bd27cf3f44731a0 366 Gene3D G3DSA:3.20.20.370 72 284 8.3E-35 T 12-10-2018 Amet_1614 afb32f78ae1eb8588bd27cf3f44731a0 366 Pfam PF01522 Polysaccharide deacetylase 129 258 9.2E-13 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Amet_1614 afb32f78ae1eb8588bd27cf3f44731a0 366 SUPERFAMILY SSF88713 89 272 1.22E-21 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Amet_3316 b7fcc6d3d8a1982d8006fe8e5784d9ad 202 Pfam PF04854 Protein of unknown function, DUF624 20 96 5.1E-28 T 12-10-2018 IPR006938 Protein of unknown function DUF624 Amet_3624 8d7b94f4c4a7160e18db77f841bfd452 441 Pfam PF02450 Lecithin:cholesterol acyltransferase 36 147 4.5E-11 T 12-10-2018 IPR003386 Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase GO:0006629|GO:0008374 Amet_3624 8d7b94f4c4a7160e18db77f841bfd452 441 SUPERFAMILY SSF53474 4 320 3.95E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold Amet_4632 afbd7e5da8d090ab2098194194a6c987 395 Pfam PF01594 AI-2E family transporter 37 374 3.2E-64 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Amet_2452 f81be517eead42fe5094b8797ae46101 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 1.8E-40 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Amet_2452 f81be517eead42fe5094b8797ae46101 149 SUPERFAMILY SSF46785 2 137 1.29E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2452 f81be517eead42fe5094b8797ae46101 149 Gene3D G3DSA:1.10.10.10 1 149 5.4E-57 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2452 f81be517eead42fe5094b8797ae46101 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Amet_2452 f81be517eead42fe5094b8797ae46101 149 Pfam PF02082 Transcriptional regulator 1 82 5.1E-29 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type Amet_0173 1e82cb728348ad94fae7231f35a13341 800 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 613 796 5.5E-28 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_0173 1e82cb728348ad94fae7231f35a13341 800 SUPERFAMILY SSF81606 595 795 1.57E-16 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_0173 1e82cb728348ad94fae7231f35a13341 800 Gene3D G3DSA:3.60.40.10 580 800 2.8E-42 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_0173 1e82cb728348ad94fae7231f35a13341 800 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 39 797 2.3E-222 T 12-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_0173 1e82cb728348ad94fae7231f35a13341 800 SMART SM00331 585 796 5.7E-25 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Amet_0619 f7fda7b6cfaa8d4d966573b29ca98037 440 SUPERFAMILY SSF55874 303 433 3.67E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0619 f7fda7b6cfaa8d4d966573b29ca98037 440 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 236 291 6.3E-11 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain Amet_0619 f7fda7b6cfaa8d4d966573b29ca98037 440 Gene3D G3DSA:1.10.287.130 224 289 1.5E-6 T 12-10-2018 Amet_0619 f7fda7b6cfaa8d4d966573b29ca98037 440 SUPERFAMILY SSF55890 237 304 2.88E-12 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Amet_0619 f7fda7b6cfaa8d4d966573b29ca98037 440 Pfam PF14501 GHKL domain 329 436 1.8E-19 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Amet_0619 f7fda7b6cfaa8d4d966573b29ca98037 440 Gene3D G3DSA:3.30.565.10 290 435 4.9E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1670 94856b39e356e87e033e69b346d96347 414 Gene3D G3DSA:3.40.50.720 96 274 3.2E-24 T 12-10-2018 Amet_1670 94856b39e356e87e033e69b346d96347 414 SUPERFAMILY SSF51735 100 253 5.89E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1670 94856b39e356e87e033e69b346d96347 414 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 115 256 1.3E-7 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Amet_1959 3bc4aae89f8f26572eb4082e62f165d1 110 Pfam PF13262 Protein of unknown function (DUF4054) 8 100 8.9E-17 T 12-10-2018 IPR025127 Protein of unknown function DUF4054 Amet_0422 3bc4aae89f8f26572eb4082e62f165d1 110 Pfam PF13262 Protein of unknown function (DUF4054) 8 100 8.9E-17 T 12-10-2018 IPR025127 Protein of unknown function DUF4054 Amet_4359 3bc4aae89f8f26572eb4082e62f165d1 110 Pfam PF13262 Protein of unknown function (DUF4054) 8 100 8.9E-17 T 12-10-2018 IPR025127 Protein of unknown function DUF4054 Amet_4227 f3c4ec94c4ac5f1a87cd8d0f2f35e906 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 2.0E-20 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 Amet_1672 70b0c518c60be2efe5263e64322103b0 127 Pfam PF06271 RDD family 5 119 8.9E-20 T 12-10-2018 IPR010432 RDD Amet_3868 4a8bded02093651fe8d4c35253fa6654 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 404 3.8E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3868 4a8bded02093651fe8d4c35253fa6654 413 Gene3D G3DSA:1.10.287.130 149 272 5.2E-17 T 12-10-2018 Amet_3868 4a8bded02093651fe8d4c35253fa6654 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 274 6.7E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_3868 4a8bded02093651fe8d4c35253fa6654 413 Gene3D G3DSA:3.30.565.10 280 406 2.6E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3868 4a8bded02093651fe8d4c35253fa6654 413 SUPERFAMILY SSF55874 286 403 2.36E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3868 4a8bded02093651fe8d4c35253fa6654 413 SUPERFAMILY SSF47384 197 275 6.87E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Amet_3868 4a8bded02093651fe8d4c35253fa6654 413 SMART SM00388 211 276 1.5E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Amet_0787 35a15fdf37e7bf845972cec2473c43f3 162 Gene3D G3DSA:1.20.58.300 6 132 1.6E-6 T 12-10-2018 Amet_0787 35a15fdf37e7bf845972cec2473c43f3 162 Pfam PF05130 FlgN protein 5 144 2.2E-21 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Amet_0787 35a15fdf37e7bf845972cec2473c43f3 162 SUPERFAMILY SSF140566 5 126 3.4E-8 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Amet_1312 24252eec9204f5443115141c5e8fe459 624 SUPERFAMILY SSF53098 233 561 6.07E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1312 24252eec9204f5443115141c5e8fe459 624 Pfam PF01609 Transposase DDE domain 262 549 1.2E-18 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_2664 c873b60fd585210a53256dc78de90174 86 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 1.9E-25 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH Amet_2664 c873b60fd585210a53256dc78de90174 86 SUPERFAMILY SSF50346 1 75 1.65E-10 T 12-10-2018 IPR011033 PRC-barrel-like superfamily Amet_2664 c873b60fd585210a53256dc78de90174 86 Pfam PF05239 PRC-barrel domain 2 76 4.4E-10 T 12-10-2018 IPR027275 PRC-barrel domain Amet_2021 966653df2829bf8eb487f351497931c8 223 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 109 202 1.6E-34 T 12-10-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal Amet_3787 68d4ee126e63f0d49f33b163d47a74ba 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 34 165 4.6E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 ProSitePatterns PS00756 Protein secY signature 2. 161 178 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 422 30.983 T 12-10-2018 IPR026593 Protein translocase subunit SecY Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 SUPERFAMILY SSF103491 3 413 6.8E-130 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 Pfam PF00344 SecY translocase 69 406 8.6E-122 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PIRSF PIRSF004557 1 423 3.1E-126 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 417 7.1E-129 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 Gene3D G3DSA:1.10.3370.10 1 418 3.2E-172 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 1.1E-97 T 12-10-2018 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PRINTS PR00303 Preprotein translocase SecY subunit signature 359 377 1.1E-97 T 12-10-2018 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PRINTS PR00303 Preprotein translocase SecY subunit signature 142 167 1.1E-97 T 12-10-2018 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PRINTS PR00303 Preprotein translocase SecY subunit signature 391 409 1.1E-97 T 12-10-2018 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PRINTS PR00303 Preprotein translocase SecY subunit signature 304 326 1.1E-97 T 12-10-2018 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PRINTS PR00303 Preprotein translocase SecY subunit signature 168 191 1.1E-97 T 12-10-2018 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PRINTS PR00303 Preprotein translocase SecY subunit signature 260 279 1.1E-97 T 12-10-2018 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 1.1E-97 T 12-10-2018 Amet_4458 592c4abc20fc972f50881d157d01cd6e 423 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 1.1E-97 T 12-10-2018 Amet_0527 ccd553d2d04ca00f237bd5767f43422c 346 SMART SM00471 125 261 5.5E-11 T 12-10-2018 IPR003607 HD/PDEase domain Amet_0527 ccd553d2d04ca00f237bd5767f43422c 346 Pfam PF01966 HD domain 129 252 4.6E-17 T 12-10-2018 IPR006674 HD domain Amet_0527 ccd553d2d04ca00f237bd5767f43422c 346 Gene3D G3DSA:1.10.3210.10 3 293 2.7E-77 T 12-10-2018 Amet_0527 ccd553d2d04ca00f237bd5767f43422c 346 SUPERFAMILY SSF109604 122 291 1.8E-34 T 12-10-2018 Amet_4573 fc704b1aafa07bdfb785d2bd70053027 449 Pfam PF00860 Permease family 27 410 9.9E-46 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Amet_4573 fc704b1aafa07bdfb785d2bd70053027 449 PIRSF PIRSF005353 1 449 1.3E-196 T 12-10-2018 IPR026033 Purine permease PbuG-like Amet_4259 8c3e2001a0afc11709c7a2d9d1cd29db 163 Gene3D G3DSA:1.20.1260.10 3 150 2.7E-26 T 12-10-2018 IPR012347 Ferritin-like Amet_4259 8c3e2001a0afc11709c7a2d9d1cd29db 163 SUPERFAMILY SSF47240 5 154 6.68E-23 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_4259 8c3e2001a0afc11709c7a2d9d1cd29db 163 Pfam PF02915 Rubrerythrin 8 145 2.4E-15 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Amet_1128 37ebc992819b44c3bb09e70d1c0c9624 244 SUPERFAMILY SSF52540 7 203 6.69E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1128 37ebc992819b44c3bb09e70d1c0c9624 244 Gene3D G3DSA:3.40.50.300 3 242 1.2E-53 T 12-10-2018 Amet_1128 37ebc992819b44c3bb09e70d1c0c9624 244 SMART SM00382 31 197 1.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1128 37ebc992819b44c3bb09e70d1c0c9624 244 Pfam PF00005 ABC transporter 22 148 4.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2815 0ab62b708b7ee2da73d019181ad0b00f 359 Gene3D G3DSA:3.40.50.2300 63 329 1.7E-99 T 12-10-2018 Amet_2815 0ab62b708b7ee2da73d019181ad0b00f 359 Pfam PF13407 Periplasmic binding protein domain 53 309 4.4E-54 T 12-10-2018 IPR025997 Periplasmic binding protein Amet_2815 0ab62b708b7ee2da73d019181ad0b00f 359 Gene3D G3DSA:3.40.50.2300 154 348 1.7E-99 T 12-10-2018 Amet_2815 0ab62b708b7ee2da73d019181ad0b00f 359 SUPERFAMILY SSF53822 50 343 1.85E-63 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_0374 f0e0dfba5cd0db17bfda9ca3ff801764 295 Pfam PF04018 Domain of unknown function (DUF368) 12 74 1.7E-7 T 12-10-2018 IPR007163 Protein of unknown function DUF368 Amet_0374 f0e0dfba5cd0db17bfda9ca3ff801764 295 Pfam PF04018 Domain of unknown function (DUF368) 25 237 2.2E-34 T 12-10-2018 IPR007163 Protein of unknown function DUF368 Amet_3257 b44e9400ef16da081cf197b4fdaf788e 84 Pfam PF12773 Double zinc ribbon 34 77 8.7E-11 T 12-10-2018 IPR025874 Double zinc ribbon Amet_2298 8fd2a0c378b5ee3d441cd1e6bfa59c8e 231 Gene3D G3DSA:2.70.70.10 116 231 2.3E-19 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_2298 8fd2a0c378b5ee3d441cd1e6bfa59c8e 231 SUPERFAMILY SSF51261 82 227 1.67E-20 T 12-10-2018 IPR011055 Duplicated hybrid motif Amet_2298 8fd2a0c378b5ee3d441cd1e6bfa59c8e 231 Pfam PF01551 Peptidase family M23 136 222 4.8E-14 T 12-10-2018 IPR016047 Peptidase M23 Amet_4541 4f44d7651f449c8145ddc5c0f86b60ca 132 Pfam PF02310 B12 binding domain 6 119 3.1E-22 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_4541 4f44d7651f449c8145ddc5c0f86b60ca 132 Gene3D G3DSA:3.40.50.280 1 132 1.4E-57 T 12-10-2018 Amet_4541 4f44d7651f449c8145ddc5c0f86b60ca 132 SUPERFAMILY SSF52242 2 129 2.35E-48 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_4541 4f44d7651f449c8145ddc5c0f86b60ca 132 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 3 131 1.2E-50 T 12-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_2531 d741ea4e12918c56575e608f38931095 248 Pfam PF02616 Segregation and condensation protein ScpA 20 241 5.1E-39 T 12-10-2018 IPR003768 Segregation and condensation protein A Amet_2531 d741ea4e12918c56575e608f38931095 248 Hamap MF_01805 Segregation and condensation protein A [scpA]. 3 245 24.009 T 12-10-2018 IPR003768 Segregation and condensation protein A Amet_3103 adbaaaf5c4474d530886ed72170e604a 327 TIGRFAM TIGR01932 hflC: HflC protein 184 324 5.7E-41 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Amet_3103 adbaaaf5c4474d530886ed72170e604a 327 SUPERFAMILY SSF117892 97 232 1.57E-20 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily Amet_3103 adbaaaf5c4474d530886ed72170e604a 327 Pfam PF01145 SPFH domain / Band 7 family 44 241 7.5E-20 T 12-10-2018 IPR001107 Band 7 domain Amet_3103 adbaaaf5c4474d530886ed72170e604a 327 SMART SM00244 39 226 5.9E-16 T 12-10-2018 IPR001107 Band 7 domain Amet_3103 adbaaaf5c4474d530886ed72170e604a 327 PIRSF PIRSF005651 18 327 8.1E-103 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Amet_3103 adbaaaf5c4474d530886ed72170e604a 327 Gene3D G3DSA:3.30.479.30 98 240 1.1E-17 T 12-10-2018 Amet_3057 6e6800e9d919ef328a804cf6d0f883af 346 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 343 1.7E-62 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Amet_3057 6e6800e9d919ef328a804cf6d0f883af 346 SUPERFAMILY SSF52540 12 207 7.97E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3057 6e6800e9d919ef328a804cf6d0f883af 346 SUPERFAMILY SSF48019 224 344 4.87E-23 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Amet_3057 6e6800e9d919ef328a804cf6d0f883af 346 Gene3D G3DSA:1.20.272.10 220 346 7.0E-35 T 12-10-2018 Amet_3057 6e6800e9d919ef328a804cf6d0f883af 346 Gene3D G3DSA:3.40.50.300 3 141 6.3E-42 T 12-10-2018 Amet_3057 6e6800e9d919ef328a804cf6d0f883af 346 Pfam PF06144 DNA polymerase III, delta subunit 19 199 1.4E-34 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Amet_1247 40c3d0382fa8c19290bfd33b2c23d658 211 SUPERFAMILY SSF51391 6 205 6.15E-64 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1247 40c3d0382fa8c19290bfd33b2c23d658 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 209 28.783 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1247 40c3d0382fa8c19290bfd33b2c23d658 211 Gene3D G3DSA:3.20.20.70 4 207 4.2E-71 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1247 40c3d0382fa8c19290bfd33b2c23d658 211 Pfam PF02581 Thiamine monophosphate synthase 11 191 7.6E-67 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1247 40c3d0382fa8c19290bfd33b2c23d658 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 203 2.7E-68 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Amet_1178 a8b84d25394efdb1ab8cb70505694a14 135 Pfam PF07784 Protein of unknown function (DUF1622) 30 102 5.7E-19 T 12-10-2018 IPR012427 Protein of unknown function DUF1622 Amet_3446 ea8eba930685922df359305a51993936 456 SUPERFAMILY SSF56059 222 423 1.24E-10 T 12-10-2018 Amet_3446 ea8eba930685922df359305a51993936 456 Pfam PF14398 YheC/D like ATP-grasp 201 449 7.3E-67 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D Amet_4119 898aa709af63d56b8b001b181ddbc2dc 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 33 49 1.6E-7 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Amet_4119 898aa709af63d56b8b001b181ddbc2dc 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 55 71 1.6E-7 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Amet_4119 898aa709af63d56b8b001b181ddbc2dc 375 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 74 92 1.6E-7 T 12-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Amet_4119 898aa709af63d56b8b001b181ddbc2dc 375 Gene3D G3DSA:3.40.50.2300 151 280 4.5E-84 T 12-10-2018 Amet_4119 898aa709af63d56b8b001b181ddbc2dc 375 Gene3D G3DSA:3.40.50.2300 40 354 4.5E-84 T 12-10-2018 Amet_4119 898aa709af63d56b8b001b181ddbc2dc 375 SUPERFAMILY SSF53822 31 374 1.95E-82 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_4119 898aa709af63d56b8b001b181ddbc2dc 375 Pfam PF13458 Periplasmic binding protein 33 370 1.5E-61 T 12-10-2018 IPR028081 Leucine-binding protein domain Amet_4338 a566dab2f3799ce9eadc268bed4fc5c7 497 Pfam PF00171 Aldehyde dehydrogenase family 29 493 2.3E-178 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Amet_4338 a566dab2f3799ce9eadc268bed4fc5c7 497 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 40 491 1.5E-206 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 Amet_4338 a566dab2f3799ce9eadc268bed4fc5c7 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 292 303 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Amet_4338 a566dab2f3799ce9eadc268bed4fc5c7 497 Gene3D G3DSA:3.40.309.10 271 465 1.0E-184 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Amet_4338 a566dab2f3799ce9eadc268bed4fc5c7 497 Gene3D G3DSA:3.40.605.10 29 487 1.0E-184 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Amet_4338 a566dab2f3799ce9eadc268bed4fc5c7 497 SUPERFAMILY SSF53720 19 495 1.44E-175 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Amet_4713 239a716376b10a12768f1b8d0580e3b9 396 Gene3D G3DSA:3.30.1330.100 7 105 1.7E-6 T 12-10-2018 Amet_4713 239a716376b10a12768f1b8d0580e3b9 396 SUPERFAMILY SSF144010 6 395 4.84E-46 T 12-10-2018 Amet_4713 239a716376b10a12768f1b8d0580e3b9 396 Pfam PF01996 F420-0:Gamma-glutamyl ligase 11 389 1.5E-81 T 12-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Amet_0983 9e434c73b9017f621a9cf2411929c6b9 133 SUPERFAMILY SSF52788 1 126 3.92E-37 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Amet_0983 9e434c73b9017f621a9cf2411929c6b9 133 SMART SM00226 3 127 1.3E-40 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Amet_0983 9e434c73b9017f621a9cf2411929c6b9 133 Gene3D G3DSA:3.40.50.2300 2 133 8.5E-44 T 12-10-2018 Amet_0983 9e434c73b9017f621a9cf2411929c6b9 133 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 124 7.0E-23 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Amet_0800 e8c472512d07d3ed2cc362c8c556c3b2 434 Gene3D G3DSA:1.20.1250.20 2 426 6.5E-70 T 12-10-2018 Amet_0800 e8c472512d07d3ed2cc362c8c556c3b2 434 Pfam PF07690 Major Facilitator Superfamily 22 379 2.8E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_0800 e8c472512d07d3ed2cc362c8c556c3b2 434 PIRSF PIRSF002808 1 434 1.5E-42 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Amet_0800 e8c472512d07d3ed2cc362c8c556c3b2 434 SUPERFAMILY SSF103473 6 424 9.16E-70 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_2087 10403304badfd399980f581740f149cb 385 Gene3D G3DSA:3.20.20.210 8 381 1.4E-28 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amet_2087 10403304badfd399980f581740f149cb 385 SUPERFAMILY SSF51726 11 384 6.28E-41 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Amet_2087 10403304badfd399980f581740f149cb 385 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 182 379 7.5E-10 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Amet_3751 cb33038f5cf5575e76bc3ab3e48de5e4 559 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 550 3.6E-117 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 Amet_3751 cb33038f5cf5575e76bc3ab3e48de5e4 559 Pfam PF02652 L-lactate permease 4 549 2.4E-123 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 Amet_3568 1f862f5d27e58c6c66c220846ee49301 429 SMART SM00387 314 424 1.9E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_3568 1f862f5d27e58c6c66c220846ee49301 429 SUPERFAMILY SSF55874 280 421 9.43E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_3568 1f862f5d27e58c6c66c220846ee49301 429 Pfam PF14501 GHKL domain 317 413 1.6E-16 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Amet_3568 1f862f5d27e58c6c66c220846ee49301 429 Gene3D G3DSA:3.30.565.10 268 420 2.7E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0556 458c55424ffc40855a57056dc9c65ba9 495 Gene3D G3DSA:3.90.1210.30 3 85 1.3E-29 T 12-10-2018 Amet_0556 458c55424ffc40855a57056dc9c65ba9 495 Pfam PF08666 SAF domain 11 81 1.1E-14 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Amet_0556 458c55424ffc40855a57056dc9c65ba9 495 SMART SM00858 11 82 1.3E-14 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Amet_0556 458c55424ffc40855a57056dc9c65ba9 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 494 6.4E-161 T 12-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 Amet_3038 85907383b7627a20b527ee60706a1396 432 SUPERFAMILY SSF141322 369 431 1.09E-8 T 12-10-2018 Amet_3038 85907383b7627a20b527ee60706a1396 432 Gene3D G3DSA:2.40.50.140 369 432 1.4E-11 T 12-10-2018 Amet_3038 85907383b7627a20b527ee60706a1396 432 SUPERFAMILY SSF52096 9 193 8.94E-26 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_3038 85907383b7627a20b527ee60706a1396 432 Gene3D G3DSA:3.90.226.10 23 234 4.4E-41 T 12-10-2018 Amet_3038 85907383b7627a20b527ee60706a1396 432 Pfam PF01957 NfeD-like C-terminal, partner-binding 283 431 1.5E-19 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 Pfam PF00005 ABC transporter 539 775 3.5E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 Gene3D G3DSA:1.10.8.280 190 318 1.2E-95 T 12-10-2018 Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 Gene3D G3DSA:3.40.50.300 31 113 3.8E-41 T 12-10-2018 Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 Gene3D G3DSA:1.20.1580.10 607 745 8.5E-116 T 12-10-2018 Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 Gene3D G3DSA:3.40.50.300 532 834 8.5E-116 T 12-10-2018 Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 ProSitePatterns PS00211 ABC transporters family signature. 745 759 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 Gene3D G3DSA:1.20.1580.10 156 402 1.2E-95 T 12-10-2018 Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 SUPERFAMILY SSF52540 31 483 7.84E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 SUPERFAMILY SSF52540 536 825 5.87E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 Gene3D G3DSA:3.40.50.300 403 492 1.2E-95 T 12-10-2018 Amet_3847 a0252c48354fac23d9922fbcbacb4a7a 842 Gene3D G3DSA:1.20.1580.10 114 147 3.8E-41 T 12-10-2018 Amet_2055 b3c96dbcd2878ce30612e736033c2a5d 413 SUPERFAMILY SSF56059 111 323 2.47E-38 T 12-10-2018 Amet_2055 b3c96dbcd2878ce30612e736033c2a5d 413 Pfam PF13535 ATP-grasp domain 147 295 6.7E-26 T 12-10-2018 Amet_2055 b3c96dbcd2878ce30612e736033c2a5d 413 Gene3D G3DSA:3.30.470.20 105 413 1.7E-71 T 12-10-2018 Amet_0262 55da593c5133f7cb79b4e9f76effe5ed 212 PIRSF PIRSF010130 1 212 3.4E-81 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Amet_0262 55da593c5133f7cb79b4e9f76effe5ed 212 Pfam PF06130 Phosphate propanoyltransferase 137 200 3.1E-17 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Amet_0262 55da593c5133f7cb79b4e9f76effe5ed 212 Pfam PF06130 Phosphate propanoyltransferase 28 107 2.6E-27 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Amet_0256 38fd22a6c68acf53da53493c4c6a1ace 299 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 74 298 2.0E-81 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Amet_0256 38fd22a6c68acf53da53493c4c6a1ace 299 Gene3D G3DSA:3.40.50.11240 117 297 1.8E-61 T 12-10-2018 Amet_0256 38fd22a6c68acf53da53493c4c6a1ace 299 Gene3D G3DSA:1.10.30.40 50 115 1.8E-23 T 12-10-2018 Amet_0256 38fd22a6c68acf53da53493c4c6a1ace 299 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 62 298 40.119 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Amet_0256 38fd22a6c68acf53da53493c4c6a1ace 299 PIRSF PIRSF018982 2 32 810.0 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Amet_0256 38fd22a6c68acf53da53493c4c6a1ace 299 PIRSF PIRSF018982 49 299 8.2E-100 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Amet_4324 d6761cb00afeaf3783deb762c7cd70f4 187 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 17 181 4.6E-42 T 12-10-2018 IPR030949 ECF transporter S component, folate family Amet_4324 d6761cb00afeaf3783deb762c7cd70f4 187 Pfam PF07155 ECF-type riboflavin transporter, S component 17 178 3.2E-14 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 Amet_4324 d6761cb00afeaf3783deb762c7cd70f4 187 Gene3D G3DSA:1.10.1760.20 9 187 5.8E-47 T 12-10-2018 Amet_3355 72904a89860770978ec69f9f1e45b83b 68 SUPERFAMILY SSF143100 4 61 5.49E-12 T 12-10-2018 IPR035069 TTHA1013/TTHA0281-like Amet_3355 72904a89860770978ec69f9f1e45b83b 68 Gene3D G3DSA:3.30.160.250 5 66 2.0E-8 T 12-10-2018 Amet_2957 b37a459b9e34480e680dad7b873b98d4 240 SUPERFAMILY SSF46785 14 139 1.18E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2957 b37a459b9e34480e680dad7b873b98d4 240 SUPERFAMILY SSF46785 132 232 8.3E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2957 b37a459b9e34480e680dad7b873b98d4 240 Gene3D G3DSA:1.10.10.10 146 238 3.5E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2957 b37a459b9e34480e680dad7b873b98d4 240 Gene3D G3DSA:1.10.10.10 4 145 1.4E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2957 b37a459b9e34480e680dad7b873b98d4 240 Pfam PF01051 Initiator Replication protein 12 229 1.5E-49 T 12-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 Amet_4418 1ceacfbe5cc807489cdc4a3b2e328bdf 332 Pfam PF11553 Protein of unknown function (DUF3231) 173 332 9.8E-55 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 Amet_4418 1ceacfbe5cc807489cdc4a3b2e328bdf 332 Pfam PF11553 Protein of unknown function (DUF3231) 4 161 1.0E-56 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 Amet_4418 1ceacfbe5cc807489cdc4a3b2e328bdf 332 Gene3D G3DSA:1.20.1260.10 1 147 6.1E-10 T 12-10-2018 IPR012347 Ferritin-like Amet_0194 2a77c2a63bfd198e77f02ae70bf40d35 171 Gene3D G3DSA:1.10.10.10 2 127 4.1E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_0194 2a77c2a63bfd198e77f02ae70bf40d35 171 SUPERFAMILY SSF46785 4 95 8.75E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_0194 2a77c2a63bfd198e77f02ae70bf40d35 171 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 47 2.9E-12 T 12-10-2018 Amet_1414 7bb9958710d3a43f5682c2dab1750094 203 Gene3D G3DSA:3.40.50.150 23 202 8.0E-30 T 12-10-2018 Amet_1414 7bb9958710d3a43f5682c2dab1750094 203 Pfam PF13489 Methyltransferase domain 38 176 9.8E-18 T 12-10-2018 Amet_1414 7bb9958710d3a43f5682c2dab1750094 203 SUPERFAMILY SSF53335 19 183 3.14E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2279 fdd8322f53fb3fd4d3dbab76fdd1c60a 181 SMART SM00387 1 106 1.6E-4 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_2279 fdd8322f53fb3fd4d3dbab76fdd1c60a 181 Gene3D G3DSA:3.30.565.10 2 104 5.6E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2279 fdd8322f53fb3fd4d3dbab76fdd1c60a 181 SUPERFAMILY SSF55874 8 134 4.85E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2279 fdd8322f53fb3fd4d3dbab76fdd1c60a 181 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 8 104 3.8E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_0764 57fd198bfbb58403152d731fddfd03e9 541 SUPERFAMILY SSF55103 238 519 3.11E-40 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Amet_0764 57fd198bfbb58403152d731fddfd03e9 541 Gene3D G3DSA:3.30.43.10 3 78 3.5E-10 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Amet_0764 57fd198bfbb58403152d731fddfd03e9 541 Gene3D G3DSA:3.30.465.10 85 259 3.5E-21 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Amet_0764 57fd198bfbb58403152d731fddfd03e9 541 SUPERFAMILY SSF56176 12 261 8.18E-39 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Amet_0764 57fd198bfbb58403152d731fddfd03e9 541 Pfam PF01565 FAD binding domain 30 117 2.2E-9 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amet_0764 57fd198bfbb58403152d731fddfd03e9 541 Pfam PF01565 FAD binding domain 134 187 5.9E-8 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Amet_0764 57fd198bfbb58403152d731fddfd03e9 541 Pfam PF02913 FAD linked oxidases, C-terminal domain 267 518 2.7E-38 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Amet_0764 57fd198bfbb58403152d731fddfd03e9 541 Gene3D G3DSA:3.30.70.2740 400 479 2.4E-9 T 12-10-2018 Amet_1885 f26e3879cd41a11bcfaae5ddef5e1313 325 Pfam PF01758 Sodium Bile acid symporter family 38 223 3.4E-26 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Amet_1885 f26e3879cd41a11bcfaae5ddef5e1313 325 Gene3D G3DSA:1.20.1530.20 1 312 1.5E-37 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Amet_3413 b91c3d249ccbaa528419d488c2cd114d 280 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 10 279 5.7E-102 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Amet_3413 b91c3d249ccbaa528419d488c2cd114d 280 Pfam PF05681 Fumarate hydratase (Fumerase) 11 278 8.7E-117 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Amet_0623 1e60fb37a4556a5e2ed5a44fb03e4e64 535 Pfam PF01609 Transposase DDE domain 193 471 3.6E-14 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_1086 d3629dd08b743bd65b605b51f022ba48 248 Gene3D G3DSA:3.30.70.2970 55 163 3.0E-62 T 12-10-2018 Amet_1086 d3629dd08b743bd65b605b51f022ba48 248 Gene3D G3DSA:3.30.110.170 45 246 3.0E-62 T 12-10-2018 Amet_1086 d3629dd08b743bd65b605b51f022ba48 248 Pfam PF04402 Protein of unknown function (DUF541) 43 246 4.4E-46 T 12-10-2018 IPR007497 Protein of unknown function DUF541 Amet_0603 ab903ab30932562dbe560c02c7a3d51f 261 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 152 248 1.6E-14 T 12-10-2018 IPR018745 Domain of unknown function DUF2294 Amet_0603 ab903ab30932562dbe560c02c7a3d51f 261 Pfam PF00072 Response regulator receiver domain 15 122 1.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0603 ab903ab30932562dbe560c02c7a3d51f 261 SMART SM00448 13 124 9.9E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0603 ab903ab30932562dbe560c02c7a3d51f 261 Gene3D G3DSA:3.40.50.2300 10 135 1.3E-31 T 12-10-2018 Amet_0603 ab903ab30932562dbe560c02c7a3d51f 261 SUPERFAMILY SSF52172 13 127 9.25E-31 T 12-10-2018 IPR011006 CheY-like superfamily Amet_3598 7fe32a2c27e24849ffb9ad6ee4feb07d 165 SUPERFAMILY SSF75217 11 164 2.62E-41 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Amet_3598 7fe32a2c27e24849ffb9ad6ee4feb07d 165 Pfam PF00588 SpoU rRNA Methylase family 11 153 3.5E-35 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Amet_3598 7fe32a2c27e24849ffb9ad6ee4feb07d 165 Gene3D G3DSA:3.40.1280.10 2 165 2.5E-65 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amet_3598 7fe32a2c27e24849ffb9ad6ee4feb07d 165 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 11 162 34.809 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Amet_3598 7fe32a2c27e24849ffb9ad6ee4feb07d 165 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 10 164 1.1E-58 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Amet_3598 7fe32a2c27e24849ffb9ad6ee4feb07d 165 PIRSF PIRSF029256 10 165 7.7E-62 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Amet_0044 274cea9d09eb09298acaf44ccdbc1762 112 Gene3D G3DSA:1.20.58.1000 12 112 1.6E-30 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Amet_0044 274cea9d09eb09298acaf44ccdbc1762 112 Pfam PF02583 Metal-sensitive transcriptional repressor 31 109 2.6E-27 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Amet_1679 eb3e9fa20eaf7ea6bf21db3c43da9fc1 196 Pfam PF02698 DUF218 domain 44 185 2.8E-24 T 12-10-2018 IPR003848 Domain of unknown function DUF218 Amet_4548 1c473671821c5ae9797ca0b034b41b0c 251 SUPERFAMILY SSF117778 22 73 1.83E-19 T 12-10-2018 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily GO:0046983 Amet_4548 1c473671821c5ae9797ca0b034b41b0c 251 Gene3D G3DSA:3.30.30.60 23 73 1.6E-20 T 12-10-2018 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily GO:0046983 Amet_4548 1c473671821c5ae9797ca0b034b41b0c 251 Gene3D G3DSA:3.40.50.280 91 250 1.3E-44 T 12-10-2018 Amet_4548 1c473671821c5ae9797ca0b034b41b0c 251 Pfam PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase 11 87 1.8E-33 T 12-10-2018 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 Amet_4548 1c473671821c5ae9797ca0b034b41b0c 251 Pfam PF02310 B12 binding domain 111 236 9.1E-22 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_4548 1c473671821c5ae9797ca0b034b41b0c 251 SUPERFAMILY SSF52242 96 247 4.19E-41 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Amet_1211 7965f8bb25395587162039ef4dc2aa1b 471 Pfam PF01554 MatE 250 416 5.9E-29 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1211 7965f8bb25395587162039ef4dc2aa1b 471 Pfam PF01554 MatE 25 185 9.2E-37 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1211 7965f8bb25395587162039ef4dc2aa1b 471 PIRSF PIRSF006603 1 464 5.2E-157 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1211 7965f8bb25395587162039ef4dc2aa1b 471 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 429 9.2E-85 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_0370 5e1464fe0401540f300e95321e06d074 264 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 262 2.2E-80 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Amet_0370 5e1464fe0401540f300e95321e06d074 264 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Amet_0370 5e1464fe0401540f300e95321e06d074 264 Pfam PF00460 Flagella basal body rod protein 4 34 5.2E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Amet_0370 5e1464fe0401540f300e95321e06d074 264 SUPERFAMILY SSF117143 89 224 1.06E-27 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Amet_0370 5e1464fe0401540f300e95321e06d074 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 136 3.2E-43 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Amet_0370 5e1464fe0401540f300e95321e06d074 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 244 8.2E-28 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Amet_0370 5e1464fe0401540f300e95321e06d074 264 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 185 262 3.9E-25 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Amet_3158 ffdf4641cb0460a8d936ce0e287b5d6b 143 SUPERFAMILY SSF54862 19 139 9.21E-26 T 12-10-2018 Amet_3158 ffdf4641cb0460a8d936ce0e287b5d6b 143 Gene3D G3DSA:3.30.70.20 18 133 1.3E-12 T 12-10-2018 Amet_3158 ffdf4641cb0460a8d936ce0e287b5d6b 143 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3158 ffdf4641cb0460a8d936ce0e287b5d6b 143 Gene3D G3DSA:3.30.70.20 69 124 1.3E-12 T 12-10-2018 Amet_3158 ffdf4641cb0460a8d936ce0e287b5d6b 143 Pfam PF12837 4Fe-4S binding domain 88 110 6.4E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_2863 55fa27c1536c499b3b0975854e9818c8 400 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 127 321 5.2E-57 T 12-10-2018 IPR010897 Sporulation stage II, protein P Amet_2863 55fa27c1536c499b3b0975854e9818c8 400 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 141 323 4.5E-50 T 12-10-2018 IPR010897 Sporulation stage II, protein P Amet_1879 34c04018d4cd503e0f4dba41ac15f9a1 337 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1879 34c04018d4cd503e0f4dba41ac15f9a1 337 Pfam PF00005 ABC transporter 26 182 5.9E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1879 34c04018d4cd503e0f4dba41ac15f9a1 337 SMART SM00382 34 240 1.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1879 34c04018d4cd503e0f4dba41ac15f9a1 337 SUPERFAMILY SSF52540 33 311 9.23E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1879 34c04018d4cd503e0f4dba41ac15f9a1 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 318 1.0E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_1879 34c04018d4cd503e0f4dba41ac15f9a1 337 Gene3D G3DSA:3.40.50.300 3 334 1.9E-97 T 12-10-2018 Amet_1879 34c04018d4cd503e0f4dba41ac15f9a1 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 299 3.3E-15 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2153 d36110375af56cf685d71cbdfac56dae 401 SUPERFAMILY SSF56726 256 398 6.54E-8 T 12-10-2018 IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily GO:0000737|GO:0003677|GO:0005694 Reactome: R-HSA-912446 Amet_2153 d36110375af56cf685d71cbdfac56dae 401 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 256 399 6.3E-35 T 12-10-2018 IPR024534 Domain of unknown function DUF2220 Amet_2721 558ebf6c9880045bc6fd64417a9b67bd 147 Pfam PF02050 Flagellar FliJ protein 23 142 1.8E-13 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Amet_2721 558ebf6c9880045bc6fd64417a9b67bd 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 7 144 2.5E-20 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Amet_3911 0f5bd06167e6a99498e6eba546ec29c9 130 Pfam PF01695 IstB-like ATP binding protein 32 128 3.2E-23 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Amet_3911 0f5bd06167e6a99498e6eba546ec29c9 130 Gene3D G3DSA:3.40.50.300 37 130 8.0E-20 T 12-10-2018 Amet_3911 0f5bd06167e6a99498e6eba546ec29c9 130 SUPERFAMILY SSF52540 39 124 3.33E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0876 1541aec525bc8f156a9daef73412e8d2 130 Pfam PF15935 RNase LS, bacterial toxin 5 96 5.0E-7 T 12-10-2018 IPR031845 Bacterial toxin, RNase RnlA/LsoA Amet_0670 3bc700ee1202b271996ac64ac5cd9f56 154 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 5 98 6.1E-13 T 12-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Amet_0218 609e2e7c1586253c385f5624143f1d75 312 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 7 310 1.2E-32 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA Amet_0218 609e2e7c1586253c385f5624143f1d75 312 Pfam PF04754 Putative transposase, YhgA-like 6 214 3.3E-69 T 12-10-2018 IPR006842 Transposase (putative), YhgA-like Amet_1980 a7f9f8453963adb4b76f66481c033f55 468 PIRSF PIRSF016636 1 468 2.5E-137 T 12-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB Amet_1980 a7f9f8453963adb4b76f66481c033f55 468 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 57 376 7.3E-25 T 12-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT Amet_1980 a7f9f8453963adb4b76f66481c033f55 468 PIRSF PIRSF500217 1 468 1.0E-140 T 12-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 Amet_3150 df3526c22ec9eb6c370c8cded350b8c4 81 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 4 48 8.0E-5 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 Amet_3150 df3526c22ec9eb6c370c8cded350b8c4 81 Pfam PF03698 Uncharacterised protein family (UPF0180) 4 78 1.6E-27 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 Amet_2803 0822039a289c041c950c88ae2b86df47 148 Gene3D G3DSA:3.30.110.150 53 146 6.8E-34 T 12-10-2018 IPR038594 SepF-like superfamily Amet_2803 0822039a289c041c950c88ae2b86df47 148 Hamap MF_01197 Cell division protein SepF [sepF]. 3 138 19.603 T 12-10-2018 IPR023052 Cell division protein SepF GO:0090529 Amet_2803 0822039a289c041c950c88ae2b86df47 148 Pfam PF04472 Cell division protein SepF 59 130 2.2E-28 T 12-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 Amet_0480 d567654e31c82248aeea317e8b4955a6 250 Pfam PF00731 AIR carboxylase 117 243 1.8E-20 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Amet_0480 d567654e31c82248aeea317e8b4955a6 250 SUPERFAMILY SSF52255 116 244 1.96E-32 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Amet_0480 d567654e31c82248aeea317e8b4955a6 250 SMART SM01001 115 247 1.4E-42 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Amet_0480 d567654e31c82248aeea317e8b4955a6 250 Gene3D G3DSA:3.40.50.7700 116 249 3.0E-38 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Amet_2661 c770eb9f678a6bcfcc275fc6ab9342e4 362 Gene3D G3DSA:3.40.250.10 13 145 1.1E-41 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_2661 c770eb9f678a6bcfcc275fc6ab9342e4 362 SUPERFAMILY SSF52821 21 167 4.58E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily Amet_2661 c770eb9f678a6bcfcc275fc6ab9342e4 362 SUPERFAMILY SSF52540 151 354 5.01E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2661 c770eb9f678a6bcfcc275fc6ab9342e4 362 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 28 333 8.3E-100 T 12-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 Amet_2661 c770eb9f678a6bcfcc275fc6ab9342e4 362 SMART SM00450 15 144 2.5E-13 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_2661 c770eb9f678a6bcfcc275fc6ab9342e4 362 Pfam PF00581 Rhodanese-like domain 28 140 6.2E-10 T 12-10-2018 IPR001763 Rhodanese-like domain Amet_3531 26f4c00121f636d70b6c06e94933fa62 415 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 412 3.3E-109 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_3531 26f4c00121f636d70b6c06e94933fa62 415 PIRSF PIRSF006066 1 415 3.7E-159 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_3531 26f4c00121f636d70b6c06e94933fa62 415 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 413 6.4E-125 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_2823 7ca09633d3201f85cafd5010497eddfb 300 Pfam PF04536 TPM domain 40 158 1.1E-33 T 12-10-2018 IPR007621 TPM domain Amet_2823 7ca09633d3201f85cafd5010497eddfb 300 Gene3D G3DSA:3.10.310.50 27 170 1.6E-45 T 12-10-2018 Amet_2966 9d79ae69ea2d97cca825eaaded4095cf 229 Gene3D G3DSA:3.40.50.2300 1 150 6.8E-35 T 12-10-2018 Amet_2966 9d79ae69ea2d97cca825eaaded4095cf 229 SMART SM00448 2 115 5.3E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_2966 9d79ae69ea2d97cca825eaaded4095cf 229 Gene3D G3DSA:1.10.10.10 152 212 1.8E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2966 9d79ae69ea2d97cca825eaaded4095cf 229 SUPERFAMILY SSF52172 1 192 1.11E-38 T 12-10-2018 IPR011006 CheY-like superfamily Amet_2966 9d79ae69ea2d97cca825eaaded4095cf 229 PIRSF PIRSF006171 1 226 7.3E-79 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 Amet_2966 9d79ae69ea2d97cca825eaaded4095cf 229 Pfam PF08279 HTH domain 170 198 9.9E-5 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 Amet_2966 9d79ae69ea2d97cca825eaaded4095cf 229 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_3054 f0b1dd02ca55d6fd7d5a05650033884f 417 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 212 412 1.2E-47 T 12-10-2018 IPR010897 Sporulation stage II, protein P Amet_3054 f0b1dd02ca55d6fd7d5a05650033884f 417 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 89 409 1.3E-72 T 12-10-2018 IPR010897 Sporulation stage II, protein P Amet_3762 70d053d78a59aad44e7f6eaee7340100 243 SMART SM00382 28 213 1.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_3762 70d053d78a59aad44e7f6eaee7340100 243 Gene3D G3DSA:3.40.50.300 1 243 1.2E-61 T 12-10-2018 Amet_3762 70d053d78a59aad44e7f6eaee7340100 243 Pfam PF00005 ABC transporter 19 162 4.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_3762 70d053d78a59aad44e7f6eaee7340100 243 SUPERFAMILY SSF52540 3 225 1.74E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3683 5fe7ea7b82cb082c5f7c9c6a92f5ab43 430 SUPERFAMILY SSF103473 6 413 1.83E-61 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_3683 5fe7ea7b82cb082c5f7c9c6a92f5ab43 430 Pfam PF07690 Major Facilitator Superfamily 16 362 4.6E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_3683 5fe7ea7b82cb082c5f7c9c6a92f5ab43 430 Gene3D G3DSA:1.20.1250.20 2 419 7.4E-60 T 12-10-2018 Amet_4235 967015356407ed7b147e2a1d58bae628 258 Hamap MF_00443 Thiazole synthase [thiG]. 3 254 40.925 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Amet_4235 967015356407ed7b147e2a1d58bae628 258 SUPERFAMILY SSF110399 4 232 4.71E-81 T 12-10-2018 Amet_4235 967015356407ed7b147e2a1d58bae628 258 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 248 3.1E-110 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Amet_4235 967015356407ed7b147e2a1d58bae628 258 Gene3D G3DSA:3.20.20.70 1 254 2.1E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_2220 a0f31d894ab31bf920304ce85f229265 341 Gene3D G3DSA:3.40.47.40 4 341 3.3E-156 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily Amet_2220 a0f31d894ab31bf920304ce85f229265 341 SUPERFAMILY SSF53901 58 316 1.2E-18 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_2220 a0f31d894ab31bf920304ce85f229265 341 PIRSF PIRSF011570 4 339 1.7E-168 T 12-10-2018 IPR010894 Stage V sporulation AD Amet_2220 a0f31d894ab31bf920304ce85f229265 341 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 10 336 1.9E-152 T 12-10-2018 IPR010894 Stage V sporulation AD Amet_2220 a0f31d894ab31bf920304ce85f229265 341 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 8 336 2.9E-165 T 12-10-2018 IPR010894 Stage V sporulation AD Amet_0286 010780ad4f676bbb8c1e7f9c7395568e 184 SUPERFAMILY SSF48452 5 160 1.64E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0286 010780ad4f676bbb8c1e7f9c7395568e 184 SMART SM00028 125 158 0.024 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0286 010780ad4f676bbb8c1e7f9c7395568e 184 SMART SM00028 6 39 28.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0286 010780ad4f676bbb8c1e7f9c7395568e 184 SMART SM00028 40 73 0.24 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Amet_0286 010780ad4f676bbb8c1e7f9c7395568e 184 Gene3D G3DSA:1.25.40.10 99 182 3.1E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_0286 010780ad4f676bbb8c1e7f9c7395568e 184 Pfam PF13432 Tetratricopeptide repeat 12 59 1.2E-4 T 12-10-2018 Amet_0286 010780ad4f676bbb8c1e7f9c7395568e 184 Gene3D G3DSA:1.25.40.10 2 98 2.1E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_1499 65b71abd9aa430ace4b9f2e17765655a 513 Pfam PF05598 Transposase domain (DUF772) 51 125 3.7E-23 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_1499 65b71abd9aa430ace4b9f2e17765655a 513 Pfam PF13751 Transposase DDE domain 373 502 3.6E-18 T 12-10-2018 IPR025668 Transposase DDE domain Amet_4514 6465c7bed96fa90d1bd827db19ca1cfe 169 PIRSF PIRSF015034 1 169 9.8E-60 T 12-10-2018 IPR025542 YacH protein Amet_4514 6465c7bed96fa90d1bd827db19ca1cfe 169 Pfam PF02151 UvrB/uvrC motif 130 165 4.4E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 Amet_4514 6465c7bed96fa90d1bd827db19ca1cfe 169 SUPERFAMILY SSF46600 129 166 2.48E-6 T 12-10-2018 IPR036876 UVR domain superfamily Amet_0622 c96123508a2ec28260151a0830e9aba2 412 SUPERFAMILY SSF56672 15 365 1.68E-52 T 12-10-2018 Amet_0622 c96123508a2ec28260151a0830e9aba2 412 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 68 288 6.3E-44 T 12-10-2018 IPR000477 Reverse transcriptase domain Amet_0622 c96123508a2ec28260151a0830e9aba2 412 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 12 375 8.6E-124 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Amet_0622 c96123508a2ec28260151a0830e9aba2 412 Pfam PF08388 Group II intron, maturase-specific domain 313 380 4.7E-19 T 12-10-2018 IPR013597 Group II intron, maturase-specific Amet_0698 77636ea470c33718c5574b9d9e1f567b 475 Gene3D G3DSA:1.20.1740.10 6 465 4.5E-60 T 12-10-2018 Amet_0698 77636ea470c33718c5574b9d9e1f567b 475 PIRSF PIRSF006060 1 464 2.5E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amet_0698 77636ea470c33718c5574b9d9e1f567b 475 Pfam PF13520 Amino acid permease 13 430 6.0E-36 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Amet_0693 8eeacf1d2dd68a09c1dd3145f05af6d3 461 Pfam PF07260 Progressive ankylosis protein (ANKH) 259 442 3.8E-9 T 12-10-2018 IPR009887 Progressive ankylosis GO:0015114|GO:0016021|GO:0035435 Reactome: R-HSA-5223345 Amet_0335 69f745e557d669c9113b7f44ff9dd000 466 Gene3D G3DSA:3.90.1310.10 54 365 5.1E-119 T 12-10-2018 Amet_0335 69f745e557d669c9113b7f44ff9dd000 466 SUPERFAMILY SSF56601 96 462 5.43E-91 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Amet_0335 69f745e557d669c9113b7f44ff9dd000 466 Gene3D G3DSA:3.40.710.10 138 458 5.1E-119 T 12-10-2018 Amet_0335 69f745e557d669c9113b7f44ff9dd000 466 Pfam PF00905 Penicillin binding protein transpeptidase domain 156 458 5.0E-72 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Amet_3590 e8fea28d34a22f0dea298d940077fad4 513 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 255 333 5.9E-9 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Amet_3590 e8fea28d34a22f0dea298d940077fad4 513 Gene3D G3DSA:3.40.47.10 147 410 3.0E-8 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_3590 e8fea28d34a22f0dea298d940077fad4 513 PIRSF PIRSF037559 1 513 6.2E-292 T 12-10-2018 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta Amet_3590 e8fea28d34a22f0dea298d940077fad4 513 SUPERFAMILY SSF53901 184 292 2.07E-10 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 Amet_3548 9d95f62907f77541238da1ce6145fe20 94 Pfam PF11823 Protein of unknown function (DUF3343) 8 75 3.6E-21 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 Amet_1462 97816880ced31969f4e793f607518220 82 Gene3D G3DSA:3.40.30.10 34 82 8.5E-15 T 12-10-2018 Amet_1462 97816880ced31969f4e793f607518220 82 Pfam PF00578 AhpC/TSA family 40 82 1.5E-9 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Amet_1462 97816880ced31969f4e793f607518220 82 SUPERFAMILY SSF52833 36 82 5.87E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily Amet_3618 1ee4879e9dc5cfd26336875e9b1a4d97 346 SUPERFAMILY SSF81345 5 341 1.31E-83 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Amet_3618 1ee4879e9dc5cfd26336875e9b1a4d97 346 Pfam PF01032 FecCD transport family 18 341 9.1E-94 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Amet_3618 1ee4879e9dc5cfd26336875e9b1a4d97 346 Gene3D G3DSA:1.10.3470.10 5 345 5.3E-103 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Amet_3393 cea127ff288e0239a3f9c5fe2e7a3be7 403 Gene3D G3DSA:2.40.30.130 2 88 6.8E-29 T 12-10-2018 Amet_3393 cea127ff288e0239a3f9c5fe2e7a3be7 403 SUPERFAMILY SSF55186 92 233 4.19E-29 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Amet_3393 cea127ff288e0239a3f9c5fe2e7a3be7 403 Gene3D G3DSA:3.10.310.40 293 400 1.3E-16 T 12-10-2018 Amet_3393 cea127ff288e0239a3f9c5fe2e7a3be7 403 SUPERFAMILY SSF50447 5 80 1.13E-15 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Amet_3393 cea127ff288e0239a3f9c5fe2e7a3be7 403 Pfam PF01411 tRNA synthetases class II (A) 19 91 7.0E-9 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Amet_3393 cea127ff288e0239a3f9c5fe2e7a3be7 403 Gene3D G3DSA:3.30.980.10 89 243 3.2E-44 T 12-10-2018 Amet_3393 cea127ff288e0239a3f9c5fe2e7a3be7 403 Pfam PF02272 DHHA1 domain 264 395 2.2E-13 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Amet_3393 cea127ff288e0239a3f9c5fe2e7a3be7 403 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 184 226 2.1E-7 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amet_3393 cea127ff288e0239a3f9c5fe2e7a3be7 403 SMART SM00863 184 226 1.1E-11 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Amet_0200 a19d95bc831fe2b372dc56d44cf7be27 508 Gene3D G3DSA:3.30.460.10 25 166 1.6E-5 T 12-10-2018 Amet_2880 a7a69e3d3276dafe3051f0b9153469e3 372 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 8 365 4.7E-139 T 12-10-2018 IPR013438 Sporulation stage V, protein E Amet_2880 a7a69e3d3276dafe3051f0b9153469e3 372 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 9 366 1.4E-116 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_2880 a7a69e3d3276dafe3051f0b9153469e3 372 Pfam PF01098 Cell cycle protein 12 367 3.1E-106 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_1638 5716e9186d925348f4e755f62aec01d8 272 SMART SM00967 34 109 4.0E-8 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Amet_1638 5716e9186d925348f4e755f62aec01d8 272 SUPERFAMILY SSF75217 98 268 6.54E-44 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases Amet_1638 5716e9186d925348f4e755f62aec01d8 272 SUPERFAMILY SSF55315 6 107 2.47E-15 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Amet_1638 5716e9186d925348f4e755f62aec01d8 272 Pfam PF00588 SpoU rRNA Methylase family 122 262 5.8E-39 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Amet_1638 5716e9186d925348f4e755f62aec01d8 272 Gene3D G3DSA:3.40.1280.10 117 272 1.5E-52 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Amet_1638 5716e9186d925348f4e755f62aec01d8 272 Gene3D G3DSA:3.30.1330.30 6 107 5.8E-20 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Amet_0228 7b1bfcab722251cf0401a47dd97e4811 346 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 338 1.4E-102 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Amet_0228 7b1bfcab722251cf0401a47dd97e4811 346 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 334 2.0E-107 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Amet_0228 7b1bfcab722251cf0401a47dd97e4811 346 Gene3D G3DSA:3.40.718.10 1 342 1.3E-133 T 12-10-2018 Amet_0228 7b1bfcab722251cf0401a47dd97e4811 346 SUPERFAMILY SSF53659 5 340 2.37E-103 T 12-10-2018 Amet_3797 3d832d055f541a6831c68176ec9e6bea 408 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 378 8.3E-41 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_3394 baf68e2b24a865f51db2a1453db5c957 373 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 251 323 1.4E-12 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Amet_3394 baf68e2b24a865f51db2a1453db5c957 373 Pfam PF07282 Putative transposase DNA-binding domain 296 364 3.2E-20 T 12-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Amet_3394 baf68e2b24a865f51db2a1453db5c957 373 Pfam PF01385 Probable transposase 174 282 7.0E-22 T 12-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 Amet_3394 baf68e2b24a865f51db2a1453db5c957 373 Pfam PF12323 Helix-turn-helix domain 1 45 1.5E-21 T 12-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain Amet_2495 2ed0ac49b2f2326e92835f4e7f1efa99 128 Pfam PF06686 Stage III sporulation protein AC/AD protein family 71 125 4.1E-20 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family Amet_2495 2ed0ac49b2f2326e92835f4e7f1efa99 128 Pfam PF06686 Stage III sporulation protein AC/AD protein family 3 57 1.8E-14 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family Amet_2495 2ed0ac49b2f2326e92835f4e7f1efa99 128 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 28 126 2.4E-36 T 12-10-2018 IPR014211 Stage III sporulation protein AD Amet_1279 b3c9cfe6451df316096d80fc70714ad2 169 SUPERFAMILY SSF50475 7 166 8.63E-20 T 12-10-2018 Amet_1279 b3c9cfe6451df316096d80fc70714ad2 169 Pfam PF01613 Flavin reductase like domain 20 165 5.1E-6 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Amet_1279 b3c9cfe6451df316096d80fc70714ad2 169 Gene3D G3DSA:2.30.110.10 3 169 9.7E-25 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Amet_0345 9ba5c84d87fe209fa17b9910e22568b3 148 Pfam PF03899 ATP synthase I chain 11 108 1.3E-14 T 12-10-2018 IPR005598 ATP synthase protein I Amet_0359 2bc7f09349b3e425e238061acd29bf29 334 Pfam PF08486 Stage II sporulation protein 52 161 8.7E-21 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Amet_0359 2bc7f09349b3e425e238061acd29bf29 334 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 34 328 2.4E-105 T 12-10-2018 IPR014225 Sporulation stage II, protein D firmicutes Amet_0359 2bc7f09349b3e425e238061acd29bf29 334 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 58 328 2.2E-73 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Amet_4233 80747c17326b691ae199b04c67a29a7e 437 Gene3D G3DSA:3.20.20.540 47 363 5.9E-138 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Amet_4233 80747c17326b691ae199b04c67a29a7e 437 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 4 427 88.935 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Amet_4233 80747c17326b691ae199b04c67a29a7e 437 Pfam PF01964 Radical SAM ThiC family 5 422 7.0E-198 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Amet_4233 80747c17326b691ae199b04c67a29a7e 437 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 5 424 4.1E-181 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Amet_2894 04ad407e556d16f1782671c495b7cb9b 197 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 17 193 3.2E-33 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like Amet_2894 04ad407e556d16f1782671c495b7cb9b 197 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 12 195 1.8E-38 T 12-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 Amet_2519 7d6de91c150790f475f7d7af5b5d6bd7 278 Pfam PF00953 Glycosyl transferase family 4 77 231 3.3E-7 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Amet_2559 d47c3a070fc81d4eb74dec83fbc41773 378 Pfam PF04865 Baseplate J-like protein 71 319 8.2E-59 T 12-10-2018 IPR006949 Baseplate protein J-like Amet_0724 b9d4c7d7be7b8353c53cad3108c5229d 137 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 1 135 1.8E-50 T 12-10-2018 IPR022258 Flagellar operon protein YvyF Amet_2267 bc1acad84f748b80bc175af022c49596 225 Pfam PF07799 Protein of unknown function (DUF1643) 51 193 1.8E-4 T 12-10-2018 IPR012441 Protein of unknown function DUF1643 Amet_2928 b9b976980f4e61eef1f26ac45b33a83a 151 Gene3D G3DSA:1.10.10.1320 1 93 2.8E-5 T 12-10-2018 Amet_2970 9ef8fd4de005f932a9b1808cf8d42057 242 SUPERFAMILY SSF69318 15 144 2.09E-10 T 12-10-2018 Amet_2869 7024a84130af6d696f320a26d0b8182c 98 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 3 76 5.6E-26 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH Amet_2869 7024a84130af6d696f320a26d0b8182c 98 SUPERFAMILY SSF50346 1 74 1.88E-15 T 12-10-2018 IPR011033 PRC-barrel-like superfamily Amet_2869 7024a84130af6d696f320a26d0b8182c 98 Pfam PF05239 PRC-barrel domain 1 76 3.1E-12 T 12-10-2018 IPR027275 PRC-barrel domain Amet_2869 7024a84130af6d696f320a26d0b8182c 98 Gene3D G3DSA:2.30.30.240 1 77 1.1E-9 T 12-10-2018 Amet_2793 4efe04dc8e37af4277f9ee1b62b0239f 283 SUPERFAMILY SSF54506 3 135 1.16E-42 T 12-10-2018 Amet_2793 4efe04dc8e37af4277f9ee1b62b0239f 283 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 65 79 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amet_2793 4efe04dc8e37af4277f9ee1b62b0239f 283 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 279 37.052 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amet_2793 4efe04dc8e37af4277f9ee1b62b0239f 283 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 277 8.2E-87 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amet_2793 4efe04dc8e37af4277f9ee1b62b0239f 283 Gene3D G3DSA:3.10.310.10 124 269 2.3E-100 T 12-10-2018 Amet_2793 4efe04dc8e37af4277f9ee1b62b0239f 283 SUPERFAMILY SSF54506 144 276 2.36E-40 T 12-10-2018 Amet_2793 4efe04dc8e37af4277f9ee1b62b0239f 283 Pfam PF01678 Diaminopimelate epimerase 159 270 1.5E-22 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amet_2793 4efe04dc8e37af4277f9ee1b62b0239f 283 Pfam PF01678 Diaminopimelate epimerase 5 127 1.0E-35 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Amet_2793 4efe04dc8e37af4277f9ee1b62b0239f 283 Gene3D G3DSA:3.10.310.10 5 275 2.3E-100 T 12-10-2018 Amet_1084 496117ab5379ecd2a08c0b14f5091ca6 52 Pfam PF00301 Rubredoxin 2 48 6.7E-24 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 Amet_1084 496117ab5379ecd2a08c0b14f5091ca6 52 PRINTS PR00163 Rubredoxin signature 2 18 8.9E-12 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 Amet_1084 496117ab5379ecd2a08c0b14f5091ca6 52 PRINTS PR00163 Rubredoxin signature 32 48 8.9E-12 T 12-10-2018 IPR024935 Rubredoxin domain GO:0005506 Amet_1084 496117ab5379ecd2a08c0b14f5091ca6 52 Gene3D G3DSA:2.20.28.10 1 50 1.1E-26 T 12-10-2018 Amet_1084 496117ab5379ecd2a08c0b14f5091ca6 52 ProSitePatterns PS00202 Rubredoxin signature. 32 42 - T 12-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Amet_1084 496117ab5379ecd2a08c0b14f5091ca6 52 PIRSF PIRSF000071 1 52 1.2E-25 T 12-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 Amet_1084 496117ab5379ecd2a08c0b14f5091ca6 52 SUPERFAMILY SSF57802 2 50 5.89E-23 T 12-10-2018 Amet_3936 d70f9e3be4c6f764848c2d67f49f656d 258 Pfam PF01061 ABC-2 type transporter 8 220 1.1E-26 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amet_3936 d70f9e3be4c6f764848c2d67f49f656d 258 PIRSF PIRSF006648 1 258 1.7E-73 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_2227 b848930ffb52a9857326e247b21d312b 153 Pfam PF11385 Protein of unknown function (DUF3189) 3 148 4.0E-52 T 12-10-2018 IPR021525 Protein of unknown function DUF3189 Amet_4667 1a565d7dcf1579709cf7169f68e03293 358 SUPERFAMILY SSF51412 8 347 3.36E-56 T 12-10-2018 Amet_4667 1a565d7dcf1579709cf7169f68e03293 358 Pfam PF03060 Nitronate monooxygenase 14 351 6.7E-55 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Amet_4667 1a565d7dcf1579709cf7169f68e03293 358 Gene3D G3DSA:3.20.20.70 9 358 3.2E-78 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3515 617b88db057686ddbd8f230702c1cb89 379 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_3515 617b88db057686ddbd8f230702c1cb89 379 Gene3D G3DSA:1.10.238.260 268 377 5.0E-28 T 12-10-2018 Amet_3515 617b88db057686ddbd8f230702c1cb89 379 Gene3D G3DSA:3.20.20.70 1 267 8.3E-90 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_3515 617b88db057686ddbd8f230702c1cb89 379 SUPERFAMILY SSF51569 2 278 6.04E-83 T 12-10-2018 Amet_3515 617b88db057686ddbd8f230702c1cb89 379 Pfam PF00682 HMGL-like 4 261 1.4E-80 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Amet_3515 617b88db057686ddbd8f230702c1cb89 379 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 5 363 1.4E-143 T 12-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 Amet_3515 617b88db057686ddbd8f230702c1cb89 379 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 190 203 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Amet_2364 803b6ccb6947b19123188180227d0634 261 Pfam PF06738 Putative threonine/serine exporter 10 252 1.4E-78 T 12-10-2018 IPR010619 Putative threonine/serine exporter Amet_1261 7a2ecf6915981e771562e2ca7a2fc936 219 Pfam PF01081 KDPG and KHG aldolase 14 204 1.2E-43 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Amet_1261 7a2ecf6915981e771562e2ca7a2fc936 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 13 212 5.5E-57 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Amet_1261 7a2ecf6915981e771562e2ca7a2fc936 219 SUPERFAMILY SSF51569 7 214 3.85E-66 T 12-10-2018 Amet_1261 7a2ecf6915981e771562e2ca7a2fc936 219 Gene3D G3DSA:3.20.20.70 5 219 3.6E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1416 7d574cc5ac0df1a926eeb75fcb644053 245 Pfam PF12838 4Fe-4S dicluster domain 176 238 5.4E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_1416 7d574cc5ac0df1a926eeb75fcb644053 245 Gene3D G3DSA:3.30.70.20 171 240 7.0E-8 T 12-10-2018 Amet_1416 7d574cc5ac0df1a926eeb75fcb644053 245 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 177 188 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_1416 7d574cc5ac0df1a926eeb75fcb644053 245 SUPERFAMILY SSF46548 136 239 1.99E-10 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Amet_2690 f5a70f4417c90304546ed41801160251 152 Gene3D G3DSA:1.10.8.1150 84 151 3.5E-5 T 12-10-2018 Amet_3770 19164623a54843fe3a284bcaa138cb44 406 SUPERFAMILY SSF103473 2 404 3.14E-39 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_3770 19164623a54843fe3a284bcaa138cb44 406 Pfam PF07690 Major Facilitator Superfamily 10 363 4.9E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_3770 19164623a54843fe3a284bcaa138cb44 406 Gene3D G3DSA:1.20.1250.20 1 401 1.0E-36 T 12-10-2018 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 Gene3D G3DSA:3.40.220.10 1 177 2.9E-44 T 12-10-2018 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 146 6.4E-26 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 SUPERFAMILY SSF52949 1 184 6.18E-32 T 12-10-2018 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 SUPERFAMILY SSF53187 182 496 1.19E-114 T 12-10-2018 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 Gene3D G3DSA:3.40.630.10 178 497 3.6E-130 T 12-10-2018 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 8.7E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 8.7E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 8.7E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 8.7E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 8.7E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 491 2.5E-121 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Amet_4616 a21ab8ee03395134f4d337e4bfd1c214 500 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 500 36.815 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Amet_4617 bfacc109d484697ff1b81f3fe220607c 469 Pfam PF03553 Na+/H+ antiporter family 160 453 4.7E-62 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Amet_4617 bfacc109d484697ff1b81f3fe220607c 469 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 456 8.6E-150 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 Amet_2693 25ffd6819374635b6984a0594b474ea5 604 Pfam PF14804 Jag N-terminus 7 53 2.2E-7 T 12-10-2018 IPR032782 Jag, N-terminal Amet_2693 25ffd6819374635b6984a0594b474ea5 604 Pfam PF03961 Flagellar Assembly Protein A 151 597 1.6E-126 T 12-10-2018 IPR005646 Flagellar assembly protein A Amet_2693 25ffd6819374635b6984a0594b474ea5 604 SMART SM01245 6 55 1.0E-8 T 12-10-2018 IPR032782 Jag, N-terminal Amet_3088 a4dc29c678fd7e145c0a6bd7914004c0 83 Pfam PF10719 Late competence development protein ComFB 3 77 5.9E-8 T 12-10-2018 IPR019657 Late competence development protein ComFB Amet_3359 a21e12ebcd9ce0dbb87dca4a55e9209c 334 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 3 212 1.6E-40 T 12-10-2018 IPR000477 Reverse transcriptase domain Amet_3359 a21e12ebcd9ce0dbb87dca4a55e9209c 334 SUPERFAMILY SSF56672 2 215 4.0E-44 T 12-10-2018 Amet_3359 a21e12ebcd9ce0dbb87dca4a55e9209c 334 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 2 301 1.4E-98 T 12-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Amet_3359 a21e12ebcd9ce0dbb87dca4a55e9209c 334 Pfam PF08388 Group II intron, maturase-specific domain 238 311 8.5E-17 T 12-10-2018 IPR013597 Group II intron, maturase-specific Amet_4585 2f6117d44671c8de6f37dfce3afd8e8e 556 Pfam PF01268 Formate--tetrahydrofolate ligase 2 556 3.6E-272 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_4585 2f6117d44671c8de6f37dfce3afd8e8e 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_4585 2f6117d44671c8de6f37dfce3afd8e8e 556 Gene3D G3DSA:3.30.1510.10 129 247 5.5E-208 T 12-10-2018 Amet_4585 2f6117d44671c8de6f37dfce3afd8e8e 556 SUPERFAMILY SSF52540 4 554 1.94E-248 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4585 2f6117d44671c8de6f37dfce3afd8e8e 556 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_4585 2f6117d44671c8de6f37dfce3afd8e8e 556 Gene3D G3DSA:3.10.410.10 443 532 9.3E-38 T 12-10-2018 Amet_4585 2f6117d44671c8de6f37dfce3afd8e8e 556 Gene3D G3DSA:3.40.50.300 7 438 5.5E-208 T 12-10-2018 Amet_4585 2f6117d44671c8de6f37dfce3afd8e8e 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 49.586 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Amet_2201 04407ce263339c8dbcf72b515e307348 508 Pfam PF00395 S-layer homology domain 26 67 5.3E-11 T 12-10-2018 IPR001119 S-layer homology domain Amet_2201 04407ce263339c8dbcf72b515e307348 508 Pfam PF00395 S-layer homology domain 161 201 1.7E-11 T 12-10-2018 IPR001119 S-layer homology domain Amet_2201 04407ce263339c8dbcf72b515e307348 508 SUPERFAMILY SSF48452 409 492 5.14E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Amet_3128 ae766ad87fac50c0dfdc071fcc778908 321 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 4.4E-26 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Amet_3600 1580431d25361461517a8139054ec389 158 TIGRFAM TIGR02271 TIGR02271: conserved domain 30 143 1.9E-41 T 12-10-2018 IPR019060 Domain of unknown function DUF2382 Amet_3600 1580431d25361461517a8139054ec389 158 Pfam PF09557 Domain of unknown function (DUF2382) 30 138 2.8E-27 T 12-10-2018 IPR019060 Domain of unknown function DUF2382 Amet_2336 4a53e92b155b113c35e2d76fd6a73a42 225 Pfam PF08955 BofC C-terminal domain 161 224 4.6E-5 T 12-10-2018 IPR015050 Bypass of forespore C, C-terminal Amet_4044 3abe5a3f34d4a05c43220636d5e7870f 145 Pfam PF07374 Protein of unknown function (DUF1492) 54 131 9.6E-5 T 12-10-2018 IPR010861 Protein of unknown function DUF1492 Amet_4687 241219cf976b895a6728de3e1a039b44 272 SUPERFAMILY SSF55383 51 121 8.24E-14 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_4687 241219cf976b895a6728de3e1a039b44 272 Pfam PF07833 Copper amine oxidase N-terminal domain 49 97 3.7E-8 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_4687 241219cf976b895a6728de3e1a039b44 272 Pfam PF07833 Copper amine oxidase N-terminal domain 99 136 4.9E-7 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_1364 08dabd23be1ca03e11a1fb07665fb1f7 75 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 49 63 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Amet_1364 08dabd23be1ca03e11a1fb07665fb1f7 75 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 26 35 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Amet_1364 08dabd23be1ca03e11a1fb07665fb1f7 75 Gene3D G3DSA:1.10.8.910 11 75 4.4E-27 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily Amet_1364 08dabd23be1ca03e11a1fb07665fb1f7 75 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 11 70 2.7E-26 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 SUPERFAMILY SSF51905 143 592 8.9E-67 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 SMART SM00900 49 123 1.2E-17 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 149 588 6.3E-126 T 12-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 Gene3D G3DSA:3.50.50.60 148 589 9.2E-147 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 Pfam PF00890 FAD binding domain 149 575 1.8E-82 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 Gene3D G3DSA:3.90.700.10 382 532 9.2E-147 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 Pfam PF04205 FMN-binding domain 49 120 4.5E-12 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 540 562 2.5E-6 T 12-10-2018 Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 169 2.5E-6 T 12-10-2018 Amet_0759 1b03e6d0c6c6025ebfa42fab33e124d0 593 SUPERFAMILY SSF56425 406 536 1.73E-26 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Amet_2405 3007e9cc929f296315760bc1de1e6fe8 157 Gene3D G3DSA:1.20.140.160 20 141 7.7E-6 T 12-10-2018 Amet_2405 3007e9cc929f296315760bc1de1e6fe8 157 SUPERFAMILY SSF88659 83 140 1.57E-7 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_3029 e5dee29551c67c9eb875171637352a14 205 Pfam PF04367 Protein of unknown function (DUF502) 56 160 3.9E-28 T 12-10-2018 IPR007462 Protein of unknown function DUF502 Amet_1783 0c1260453aead4bfa66ca490c5f4e0e7 185 Pfam PF00398 Ribosomal RNA adenine dimethylase 24 97 4.5E-9 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Amet_1783 0c1260453aead4bfa66ca490c5f4e0e7 185 Gene3D G3DSA:3.40.50.150 17 179 3.2E-18 T 12-10-2018 Amet_1783 0c1260453aead4bfa66ca490c5f4e0e7 185 SUPERFAMILY SSF53335 5 165 7.7E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0509 b628d0519549c1fcd7d5bf871ac922d8 471 SUPERFAMILY SSF53686 36 368 2.36E-54 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_0509 b628d0519549c1fcd7d5bf871ac922d8 471 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 367 1.2E-50 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_0509 b628d0519549c1fcd7d5bf871ac922d8 471 Gene3D G3DSA:3.40.50.1100 100 208 2.8E-43 T 12-10-2018 Amet_0509 b628d0519549c1fcd7d5bf871ac922d8 471 Gene3D G3DSA:3.40.50.1100 62 367 2.8E-43 T 12-10-2018 Amet_0300 e35500f7880fc0603a5b114d47c85d15 88 Pfam PF13711 Domain of unknown function (DUF4160) 9 72 2.5E-24 T 12-10-2018 IPR025427 Protein of unknown function DUF4160 Amet_1753 1df0b26534bca2512302c7da54ca5632 486 Pfam PF05598 Transposase domain (DUF772) 56 126 1.4E-9 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_2104 41a4bb120d10380420dd298eb4a302d9 72 Gene3D G3DSA:1.10.260.40 5 72 5.9E-10 T 12-10-2018 Amet_2104 41a4bb120d10380420dd298eb4a302d9 72 SUPERFAMILY SSF47413 1 69 3.38E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2104 41a4bb120d10380420dd298eb4a302d9 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 64 1.2E-22 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_2104 41a4bb120d10380420dd298eb4a302d9 72 SMART SM00530 5 61 1.0E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_3876 397abdaa9123530c6daf444880e19ad7 456 PIRSF PIRSF006603 2 450 3.2E-105 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3876 397abdaa9123530c6daf444880e19ad7 456 Pfam PF01554 MatE 28 189 4.0E-30 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3876 397abdaa9123530c6daf444880e19ad7 456 Pfam PF01554 MatE 250 409 2.3E-28 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3876 397abdaa9123530c6daf444880e19ad7 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 409 4.8E-76 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4267 9e5944e8f99a31078492c1988726d70a 421 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 98 5.3E-9 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Amet_4267 9e5944e8f99a31078492c1988726d70a 421 Pfam PF00107 Zinc-binding dehydrogenase 226 329 3.4E-10 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Amet_4267 9e5944e8f99a31078492c1988726d70a 421 SUPERFAMILY SSF50129 3 189 1.4E-25 T 12-10-2018 IPR011032 GroES-like superfamily Amet_4267 9e5944e8f99a31078492c1988726d70a 421 Gene3D G3DSA:3.90.180.10 14 353 7.3E-37 T 12-10-2018 Amet_4267 9e5944e8f99a31078492c1988726d70a 421 Gene3D G3DSA:3.40.50.720 163 320 7.3E-37 T 12-10-2018 Amet_4267 9e5944e8f99a31078492c1988726d70a 421 SUPERFAMILY SSF51735 175 339 9.64E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_3092 6ff2f93c48d974220db38026d76a35ca 137 Gene3D G3DSA:3.10.129.10 2 137 2.4E-46 T 12-10-2018 Amet_3092 6ff2f93c48d974220db38026d76a35ca 137 SUPERFAMILY SSF54637 3 137 1.83E-42 T 12-10-2018 IPR029069 HotDog domain superfamily Amet_3092 6ff2f93c48d974220db38026d76a35ca 137 Pfam PF01575 MaoC like domain 14 117 4.1E-25 T 12-10-2018 IPR002539 MaoC-like dehydratase domain Amet_3448 7384355983d6809b3ab6d5fca71ed8c4 343 Gene3D G3DSA:3.30.470.20 209 333 1.3E-9 T 12-10-2018 Amet_3448 7384355983d6809b3ab6d5fca71ed8c4 343 Pfam PF14398 YheC/D like ATP-grasp 91 338 9.1E-60 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D Amet_3448 7384355983d6809b3ab6d5fca71ed8c4 343 SUPERFAMILY SSF56059 100 312 6.48E-12 T 12-10-2018 Amet_3203 a36340444db419380dadf162bbbc3856 383 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 374 1.1E-78 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_3203 a36340444db419380dadf162bbbc3856 383 Gene3D G3DSA:3.30.300.210 226 377 3.7E-34 T 12-10-2018 IPR038501 Spore germination GerAC superfamily Amet_3203 a36340444db419380dadf162bbbc3856 383 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 211 374 1.1E-32 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_0442 80c5efc7dce483802657bc3f03a6acdc 219 PIRSF PIRSF000090 1 217 1.9E-58 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Amet_0442 80c5efc7dce483802657bc3f03a6acdc 219 Gene3D G3DSA:3.40.50.620 1 218 6.9E-63 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_0442 80c5efc7dce483802657bc3f03a6acdc 219 Pfam PF01012 Electron transfer flavoprotein domain 6 157 1.9E-37 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0442 80c5efc7dce483802657bc3f03a6acdc 219 SMART SM00893 3 166 3.4E-29 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0442 80c5efc7dce483802657bc3f03a6acdc 219 SUPERFAMILY SSF52402 2 211 6.91E-53 T 12-10-2018 Amet_1458 09b68887c61cde9ed00f6588506eb791 342 SMART SM00387 223 334 9.0E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1458 09b68887c61cde9ed00f6588506eb791 342 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 224 329 1.9E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Amet_1458 09b68887c61cde9ed00f6588506eb791 342 Gene3D G3DSA:3.30.565.10 184 338 2.1E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1458 09b68887c61cde9ed00f6588506eb791 342 SUPERFAMILY SSF55874 190 330 3.14E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_0813 6525531d3385f88ae442797ff209ff7d 56 PRINTS PR00354 7Fe ferredoxin signature 17 27 3.7E-5 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Amet_0813 6525531d3385f88ae442797ff209ff7d 56 PRINTS PR00354 7Fe ferredoxin signature 33 50 3.7E-5 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Amet_0813 6525531d3385f88ae442797ff209ff7d 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0813 6525531d3385f88ae442797ff209ff7d 56 Pfam PF12838 4Fe-4S dicluster domain 8 52 3.7E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_0813 6525531d3385f88ae442797ff209ff7d 56 Gene3D G3DSA:3.30.70.20 2 54 1.1E-20 T 12-10-2018 Amet_0813 6525531d3385f88ae442797ff209ff7d 56 SUPERFAMILY SSF54862 1 55 1.54E-17 T 12-10-2018 Amet_0813 6525531d3385f88ae442797ff209ff7d 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_0927 2d071d18f8c0f9c07c163e55dcaee202 364 SUPERFAMILY SSF51905 2 311 3.72E-13 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0927 2d071d18f8c0f9c07c163e55dcaee202 364 Gene3D G3DSA:3.50.50.60 1 60 1.3E-7 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0927 2d071d18f8c0f9c07c163e55dcaee202 364 Gene3D G3DSA:3.50.50.60 121 362 9.0E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Amet_0927 2d071d18f8c0f9c07c163e55dcaee202 364 Pfam PF13450 NAD(P)-binding Rossmann-like domain 5 36 2.8E-5 T 12-10-2018 Amet_3763 c0929d2b74eff44496a8196751d7ad10 254 PIRSF PIRSF005647 1 254 1.2E-79 T 12-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type Amet_3763 c0929d2b74eff44496a8196751d7ad10 254 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 232 1.2E-19 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_3763 c0929d2b74eff44496a8196751d7ad10 254 SUPERFAMILY SSF52540 1 232 1.54E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3763 c0929d2b74eff44496a8196751d7ad10 254 Gene3D G3DSA:3.40.50.300 1 254 1.9E-61 T 12-10-2018 Amet_4000 2db14ae60f740242f6177a5de32f7e56 159 Gene3D G3DSA:2.20.25.270 20 82 5.7E-12 T 12-10-2018 Amet_4000 2db14ae60f740242f6177a5de32f7e56 159 Pfam PF04324 BFD-like [2Fe-2S] binding domain 97 150 2.8E-6 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Amet_4000 2db14ae60f740242f6177a5de32f7e56 159 Gene3D G3DSA:1.10.10.1100 84 154 1.1E-23 T 12-10-2018 Amet_4517 de9c268fc5be4cf710d2eb6af1fd6090 160 SUPERFAMILY SSF49329 22 158 5.63E-41 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Amet_4517 de9c268fc5be4cf710d2eb6af1fd6090 160 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 146 157 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Amet_4517 de9c268fc5be4cf710d2eb6af1fd6090 160 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 23 157 7.4E-35 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Amet_4517 de9c268fc5be4cf710d2eb6af1fd6090 160 Gene3D G3DSA:2.60.40.200 20 157 8.1E-39 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Amet_1592 d5e29a09ce5d9d2dd89de86777039a18 68 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 21 30 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Amet_1592 d5e29a09ce5d9d2dd89de86777039a18 68 Gene3D G3DSA:1.10.8.910 6 68 1.8E-27 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily Amet_1592 d5e29a09ce5d9d2dd89de86777039a18 68 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 44 58 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Amet_1592 d5e29a09ce5d9d2dd89de86777039a18 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 6 65 6.7E-27 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Amet_3815 3b9f07a22e93cc5092cb23c85ab5c48d 88 Pfam PF12674 Putative zinc ribbon domain 5 86 1.4E-32 T 12-10-2018 IPR025868 Putative zinc ribbon domain Amet_1149 c0f39b27271122a13c02ee14d6619278 532 Pfam PF00361 Proton-conducting membrane transporter 120 409 5.2E-51 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Amet_1105 e0af5c250cf1a4be9925751995d5524d 329 Gene3D G3DSA:3.40.190.10 135 255 4.2E-55 T 12-10-2018 Amet_1105 e0af5c250cf1a4be9925751995d5524d 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 71 316 6.3E-20 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_1105 e0af5c250cf1a4be9925751995d5524d 329 Gene3D G3DSA:3.40.190.150 38 317 4.2E-55 T 12-10-2018 Amet_1105 e0af5c250cf1a4be9925751995d5524d 329 SUPERFAMILY SSF53850 124 291 2.04E-5 T 12-10-2018 Amet_1105 e0af5c250cf1a4be9925751995d5524d 329 PIRSF PIRSF017082 1 329 5.3E-56 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_3717 d5e6db0b105327609364616a5dbdc36e 228 Pfam PF12698 ABC-2 family transporter protein 48 222 4.4E-20 T 12-10-2018 Amet_0830 205821aa04e39579e067e4d4be46041f 173 Pfam PF00583 Acetyltransferase (GNAT) family 56 145 3.1E-11 T 12-10-2018 IPR000182 GNAT domain Amet_0830 205821aa04e39579e067e4d4be46041f 173 SUPERFAMILY SSF55729 1 159 1.41E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_0830 205821aa04e39579e067e4d4be46041f 173 Gene3D G3DSA:3.40.630.30 1 167 4.8E-23 T 12-10-2018 Amet_3429 ac091a9f63ca9317e1c7acdb3e91a550 386 Pfam PF14398 YheC/D like ATP-grasp 127 381 3.2E-66 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D Amet_3429 ac091a9f63ca9317e1c7acdb3e91a550 386 SUPERFAMILY SSF56059 133 362 2.16E-9 T 12-10-2018 Amet_1558 ae55877920309426cb67803a48504679 157 SUPERFAMILY SSF55874 26 148 2.01E-11 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_1558 ae55877920309426cb67803a48504679 157 Gene3D G3DSA:3.30.565.10 25 151 1.6E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_4123 984db2fdbd16a25014fde03cc33c25cb 67 Pfam PF04024 PspC domain 4 62 1.1E-21 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Amet_2443 4e88fa3b038091a72185e6ff4c7345f0 118 Pfam PF10710 Protein of unknown function (DUF2512) 3 116 2.8E-11 T 12-10-2018 IPR019649 Protein of unknown function DUF2512 Amet_2345 5bcbea668c0309e35d4eea964b5e8ec1 46 Pfam PF13165 Six-cysteine peptide SCIFF 2 45 1.4E-23 T 12-10-2018 IPR023975 Six-cysteine peptide SCIFF Amet_2345 5bcbea668c0309e35d4eea964b5e8ec1 46 TIGRFAM TIGR03973 six_Cys_in_45: six-cysteine peptide SCIFF 2 44 6.9E-24 T 12-10-2018 IPR023975 Six-cysteine peptide SCIFF Amet_2137 1c1955e8fd4961deb473a7db9d30cc85 74 Pfam PF07872 Protein of unknown function (DUF1659) 15 49 2.3E-8 T 12-10-2018 IPR012454 Protein of unknown function DUF1659 Amet_2506 203fe9e987c8a372cd2711a7a397caaa 149 Pfam PF02681 Divergent PAP2 family 9 144 1.3E-51 T 12-10-2018 IPR003832 Protein of unknown function DUF212 Amet_0224 a4acdaaf99b6d20a64cfab5f408b4787 988 Pfam PF13086 AAA domain 271 485 4.7E-7 T 12-10-2018 Amet_0224 a4acdaaf99b6d20a64cfab5f408b4787 988 Gene3D G3DSA:3.40.50.300 787 984 6.6E-38 T 12-10-2018 Amet_0224 a4acdaaf99b6d20a64cfab5f408b4787 988 Pfam PF13087 AAA domain 776 958 7.1E-29 T 12-10-2018 Amet_0224 a4acdaaf99b6d20a64cfab5f408b4787 988 SUPERFAMILY SSF52540 269 966 3.3E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0035 d23fc3ca7c58628737df9e7950ca389a 367 Pfam PF07907 YibE/F-like protein 122 359 6.0E-76 T 12-10-2018 IPR012507 YibE/F-like Amet_1024 d9bfaa4d1bb185c5485bcf1a3a251641 235 SUPERFAMILY SSF52540 3 230 7.22E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1024 d9bfaa4d1bb185c5485bcf1a3a251641 235 Gene3D G3DSA:3.40.50.300 1 234 3.2E-67 T 12-10-2018 Amet_1024 d9bfaa4d1bb185c5485bcf1a3a251641 235 Pfam PF00005 ABC transporter 23 158 7.9E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1024 d9bfaa4d1bb185c5485bcf1a3a251641 235 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_1024 d9bfaa4d1bb185c5485bcf1a3a251641 235 SMART SM00382 27 215 6.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2791 6468a9416cf1f759940de63adba66657 94 Hamap MF_01503 UPF0296 protein . 4 92 30.099 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A Amet_2791 6468a9416cf1f759940de63adba66657 94 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 6 79 4.0E-36 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A Amet_2791 6468a9416cf1f759940de63adba66657 94 Pfam PF04025 Domain of unknown function (DUF370) 6 78 5.9E-38 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A Amet_3583 735c24ef9ee9c03702226473cb389f97 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 292 5.3E-44 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_2644 6dbc7adabc59441fff671cf51b43d752 140 Gene3D G3DSA:1.10.287.1080 6 103 1.6E-6 T 12-10-2018 Amet_2644 6dbc7adabc59441fff671cf51b43d752 140 SUPERFAMILY SSF101386 10 95 2.24E-7 T 12-10-2018 Amet_2672 f977c8497a245ef9c4ee1b9c8a2c8550 138 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 11 99 3.0E-45 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Amet_2672 f977c8497a245ef9c4ee1b9c8a2c8550 138 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 112 24.908 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Amet_2672 f977c8497a245ef9c4ee1b9c8a2c8550 138 Gene3D G3DSA:3.30.300.20 3 107 4.3E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta Amet_2672 f977c8497a245ef9c4ee1b9c8a2c8550 138 Pfam PF02033 Ribosome-binding factor A 8 111 1.3E-31 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Amet_2672 f977c8497a245ef9c4ee1b9c8a2c8550 138 SUPERFAMILY SSF89919 6 115 1.14E-31 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Amet_2672 f977c8497a245ef9c4ee1b9c8a2c8550 138 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 6 117 3.3E-29 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Amet_1668 71ebbcf2ab551b297d5843a456df511f 96 PIRSF PIRSF032582 1 96 8.6E-41 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Amet_1668 71ebbcf2ab551b297d5843a456df511f 96 Pfam PF09827 CRISPR associated protein Cas2 1 78 2.4E-25 T 12-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Amet_1668 71ebbcf2ab551b297d5843a456df511f 96 Gene3D G3DSA:3.30.70.240 1 96 1.1E-34 T 12-10-2018 Amet_1668 71ebbcf2ab551b297d5843a456df511f 96 SUPERFAMILY SSF143430 1 89 1.57E-27 T 12-10-2018 Amet_1668 71ebbcf2ab551b297d5843a456df511f 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 94 2.9E-21 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Amet_1668 71ebbcf2ab551b297d5843a456df511f 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 95 15.854 T 12-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Amet_0278 835b736829a10d638c79e40a7c2c2863 124 Pfam PF06695 Putative small multi-drug export protein 1 108 6.8E-35 T 12-10-2018 IPR009577 Putative small multi-drug export Amet_1803 5b477e7f2db176b564109cc215d02363 244 Pfam PF14285 Domain of unknown function (DUF4367) 134 243 2.3E-12 T 12-10-2018 IPR025377 Domain of unknown function DUF4367 Amet_2130 896eeaf1a5b247bc2798076336ab8e9e 162 Pfam PF13673 Acetyltransferase (GNAT) domain 43 152 2.3E-11 T 12-10-2018 IPR000182 GNAT domain Amet_2130 896eeaf1a5b247bc2798076336ab8e9e 162 Gene3D G3DSA:3.40.630.30 2 162 5.1E-22 T 12-10-2018 Amet_2130 896eeaf1a5b247bc2798076336ab8e9e 162 SUPERFAMILY SSF55729 2 156 1.27E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_3718 e8db1f1e161089ea4e0b6a74744418e1 244 SUPERFAMILY SSF82866 16 152 7.19E-5 T 12-10-2018 Amet_3718 e8db1f1e161089ea4e0b6a74744418e1 244 Pfam PF01061 ABC-2 type transporter 10 205 1.4E-8 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amet_3461 f3699431e2c553fe241d1b3dcc86da7c 466 Pfam PF03553 Na+/H+ antiporter family 160 453 1.4E-56 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Amet_3461 f3699431e2c553fe241d1b3dcc86da7c 466 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 456 7.6E-147 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 Amet_0886 49f351f93a621f60f2dad25f6f92da29 101 SMART SM00530 3 58 1.2E-18 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0886 49f351f93a621f60f2dad25f6f92da29 101 Pfam PF01381 Helix-turn-helix 4 58 7.1E-20 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Amet_0886 49f351f93a621f60f2dad25f6f92da29 101 Gene3D G3DSA:1.10.260.40 2 62 3.7E-25 T 12-10-2018 Amet_0886 49f351f93a621f60f2dad25f6f92da29 101 SUPERFAMILY SSF47413 3 66 1.31E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0301 5c6e23c10d3fa7a0b6ae121c8a5e244c 81 SUPERFAMILY SSF143880 1 74 1.57E-22 T 12-10-2018 IPR036782 NE0471-like, N-terminal Amet_0301 5c6e23c10d3fa7a0b6ae121c8a5e244c 81 Gene3D G3DSA:3.30.2020.10 1 78 2.3E-9 T 12-10-2018 IPR036782 NE0471-like, N-terminal Amet_0301 5c6e23c10d3fa7a0b6ae121c8a5e244c 81 Pfam PF10387 Protein of unknown function (DUF2442) 6 75 1.5E-20 T 12-10-2018 IPR018841 Protein of unknown function DUF2442 Amet_1706 b47fbfe96b850bd3a61fda32e7a8fd4a 317 Gene3D G3DSA:3.40.50.720 1 312 1.2E-105 T 12-10-2018 Amet_1706 b47fbfe96b850bd3a61fda32e7a8fd4a 317 SUPERFAMILY SSF51735 1 315 1.62E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1706 b47fbfe96b850bd3a61fda32e7a8fd4a 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 241 4.3E-29 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Amet_1582 2531c322e1eb8148c72165c730c08011 449 SUPERFAMILY SSF53098 43 429 1.97E-18 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_1582 2531c322e1eb8148c72165c730c08011 449 Pfam PF13546 DDE superfamily endonuclease 37 270 5.4E-16 T 12-10-2018 IPR038721 Transposase IS701-like, DDE domain Amet_4146 b26468b579c44b8c0939cd5670a4c775 219 SUPERFAMILY SSF89392 56 205 3.18E-14 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Amet_4146 b26468b579c44b8c0939cd5670a4c775 219 Pfam PF17131 Outer membrane lipoprotein-sorting protein 73 183 1.7E-8 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein Amet_4146 b26468b579c44b8c0939cd5670a4c775 219 Gene3D G3DSA:2.50.20.10 17 212 1.3E-21 T 12-10-2018 Amet_2100 3720ed6d749257045602bbb9b09bd808 185 Pfam PF10050 Predicted metal-binding protein (DUF2284) 20 172 9.5E-35 T 12-10-2018 IPR019271 Protein of unknown function DUF2284, metal-binding Amet_1177 70d6b7af1442bc470f01c97a471117bc 710 Pfam PF03063 Prismane/CO dehydrogenase family 125 689 3.3E-128 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Amet_1177 70d6b7af1442bc470f01c97a471117bc 710 Gene3D G3DSA:3.40.50.2030 494 706 1.7E-68 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_1177 70d6b7af1442bc470f01c97a471117bc 710 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 87 709 3.7E-201 T 12-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Amet_1177 70d6b7af1442bc470f01c97a471117bc 710 Gene3D G3DSA:1.20.1270.30 138 313 3.2E-43 T 12-10-2018 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Amet_1177 70d6b7af1442bc470f01c97a471117bc 710 SUPERFAMILY SSF56821 73 709 6.26E-171 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Amet_1177 70d6b7af1442bc470f01c97a471117bc 710 Gene3D G3DSA:3.40.50.2030 316 493 7.5E-51 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Amet_3084 4ac81d34d3ec94d508e8952183fc0ce9 322 Gene3D G3DSA:3.40.190.150 32 312 1.3E-82 T 12-10-2018 Amet_3084 4ac81d34d3ec94d508e8952183fc0ce9 322 SUPERFAMILY SSF53850 119 282 3.33E-5 T 12-10-2018 Amet_3084 4ac81d34d3ec94d508e8952183fc0ce9 322 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 310 9.3E-55 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_3084 4ac81d34d3ec94d508e8952183fc0ce9 322 Gene3D G3DSA:3.40.190.10 128 250 1.3E-82 T 12-10-2018 Amet_3084 4ac81d34d3ec94d508e8952183fc0ce9 322 PIRSF PIRSF017082 1 322 2.1E-105 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 Amet_1579 eddde82da2bf23c2c566450442f59fcf 312 Gene3D G3DSA:3.10.180.10 67 210 6.0E-115 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1579 eddde82da2bf23c2c566450442f59fcf 312 Gene3D G3DSA:3.10.180.10 7 301 6.0E-115 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1579 eddde82da2bf23c2c566450442f59fcf 312 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 266 2.4E-30 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amet_1579 eddde82da2bf23c2c566450442f59fcf 312 SUPERFAMILY SSF54593 4 282 4.55E-49 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1619 fbfdb46d433ab52eac7e8f482f367aa7 219 Pfam PF00436 Single-strand binding protein family 110 205 9.7E-13 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Amet_1619 fbfdb46d433ab52eac7e8f482f367aa7 219 SUPERFAMILY SSF50249 8 208 1.18E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold Amet_1619 fbfdb46d433ab52eac7e8f482f367aa7 219 Gene3D G3DSA:2.40.50.140 1 101 7.1E-14 T 12-10-2018 Amet_1619 fbfdb46d433ab52eac7e8f482f367aa7 219 Gene3D G3DSA:2.40.50.140 102 208 1.4E-21 T 12-10-2018 Amet_2079 cfc6d62153f5f3989b0e6db62e5f4716 491 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 16 461 1.3E-120 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 Amet_2079 cfc6d62153f5f3989b0e6db62e5f4716 491 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 10 477 45.47 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 Amet_1101 2353c802d2e83330617607e5c85530df 376 Pfam PF07907 YibE/F-like protein 120 360 5.4E-83 T 12-10-2018 IPR012507 YibE/F-like Amet_4301 e5caff73b539b63a8760ffff913b8544 537 Pfam PF02554 Carbon starvation protein CstA 1 349 3.5E-129 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Amet_4301 e5caff73b539b63a8760ffff913b8544 537 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 374 489 1.0E-37 T 12-10-2018 IPR025299 CstA, C-terminal domain Amet_3693 302c529f7843a489a074fa69ce30ddc8 173 Gene3D G3DSA:1.10.1760.20 1 167 1.4E-49 T 12-10-2018 Amet_3693 302c529f7843a489a074fa69ce30ddc8 173 Pfam PF07155 ECF-type riboflavin transporter, S component 4 162 1.6E-46 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 Amet_2033 bbe6a857892595115d5baaf83e58d7e9 139 Pfam PF12953 Domain of unknown function (DUF3842) 3 129 2.5E-49 T 12-10-2018 IPR024208 Protein of unknown function DUF3842 Amet_3629 5b48aa12eebffc290762e078737dba14 93 SUPERFAMILY SSF103007 2 92 2.09E-31 T 12-10-2018 IPR036746 TT1725-like superfamily Amet_3629 5b48aa12eebffc290762e078737dba14 93 Pfam PF04456 Protein of unknown function (DUF503) 3 89 1.6E-33 T 12-10-2018 IPR007546 Protein of unknown function DUF503 Amet_3629 5b48aa12eebffc290762e078737dba14 93 Gene3D G3DSA:3.30.70.1120 1 93 8.7E-33 T 12-10-2018 IPR036746 TT1725-like superfamily Amet_2406 3b65621fd21d502d81cb7f6ba117a40e 148 Pfam PF01471 Putative peptidoglycan binding domain 96 146 8.2E-16 T 12-10-2018 IPR002477 Peptidoglycan binding-like Amet_2406 3b65621fd21d502d81cb7f6ba117a40e 148 SUPERFAMILY SSF47090 90 146 2.07E-17 T 12-10-2018 IPR036365 PGBD-like superfamily Amet_2406 3b65621fd21d502d81cb7f6ba117a40e 148 Gene3D G3DSA:1.10.101.10 77 148 2.5E-20 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Amet_1422 e0584e38ebd7b579c48b69534b5c6c5d 298 SUPERFAMILY SSF141571 72 289 6.28E-23 T 12-10-2018 Amet_1422 e0584e38ebd7b579c48b69534b5c6c5d 298 Pfam PF00805 Pentapeptide repeats (8 copies) 227 265 1.4E-12 T 12-10-2018 IPR001646 Pentapeptide repeat Amet_1422 e0584e38ebd7b579c48b69534b5c6c5d 298 Gene3D G3DSA:2.160.20.100 183 288 1.3E-17 T 12-10-2018 Amet_0958 7fe084ffbd507f8c935ba4183a1f8ce7 160 Gene3D G3DSA:3.60.21.10 1 160 1.9E-33 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like Amet_0958 7fe084ffbd507f8c935ba4183a1f8ce7 160 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 5 147 5.0E-24 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Amet_0958 7fe084ffbd507f8c935ba4183a1f8ce7 160 SUPERFAMILY SSF56300 4 150 1.9E-32 T 12-10-2018 Amet_0958 7fe084ffbd507f8c935ba4183a1f8ce7 160 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 104 128 - T 12-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site Amet_0958 7fe084ffbd507f8c935ba4183a1f8ce7 160 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 5 146 1.2E-19 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Amet_2566 da32e923098d4aaeff89018b1f4eb483 149 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 28 146 1.8E-31 T 12-10-2018 IPR014986 Clostridium phage phiCD119, XkdN Amet_2566 da32e923098d4aaeff89018b1f4eb483 149 Gene3D G3DSA:3.30.2220.30 25 141 1.7E-22 T 12-10-2018 IPR038559 Clostridium phage phiCD119, XkdN superfamily Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 SUPERFAMILY SSF56235 3 535 5.79E-179 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 355 373 2.5E-39 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 379 397 2.5E-39 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 264 283 2.5E-39 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 434 451 2.5E-39 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 44 69 2.5E-39 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 235 251 2.5E-39 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 131 150 2.5E-39 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 113 131 2.5E-39 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 410 425 2.5E-39 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 Gene3D G3DSA:3.60.20.40 356 535 5.8E-67 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 Gene3D G3DSA:1.10.246.130 251 355 1.9E-23 T 12-10-2018 Amet_0676 8a1e11209553f8638d8d8a31290a2543 535 Pfam PF01019 Gamma-glutamyltranspeptidase 37 530 1.9E-158 T 12-10-2018 Amet_4288 dd0807cbd7c87525c1a6b4705009246b 243 Pfam PF01966 HD domain 44 149 1.5E-10 T 12-10-2018 IPR006674 HD domain Amet_4288 dd0807cbd7c87525c1a6b4705009246b 243 TIGRFAM TIGR00277 HDIG: HDIG domain 44 111 8.8E-8 T 12-10-2018 IPR006675 HDIG domain Amet_4288 dd0807cbd7c87525c1a6b4705009246b 243 SMART SM00471 39 159 7.3E-8 T 12-10-2018 IPR003607 HD/PDEase domain Amet_4288 dd0807cbd7c87525c1a6b4705009246b 243 Gene3D G3DSA:1.10.3210.50 20 243 2.2E-56 T 12-10-2018 Amet_4288 dd0807cbd7c87525c1a6b4705009246b 243 SUPERFAMILY SSF109604 29 241 3.4E-50 T 12-10-2018 Amet_3247 abdcc3fc11c7cdb36bd2ce22aa567a87 79 Gene3D G3DSA:1.10.150.130 29 79 7.3E-6 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal Amet_3729 3a536ee1cb448c402a7f7eacda1705d7 379 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 70 350 2.9E-56 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Amet_3729 3a536ee1cb448c402a7f7eacda1705d7 379 Gene3D G3DSA:3.40.190.170 61 369 2.4E-79 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Amet_1840 3905ec3f130199ce9f28c171e251f3a1 226 Pfam PF03773 Predicted permease 10 152 1.2E-38 T 12-10-2018 IPR005524 Predicted permease DUF318 Amet_3488 ddafdda52628c4edc71ead75fc05e01e 336 Pfam PF13480 Acetyltransferase (GNAT) domain 150 279 3.8E-8 T 12-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Amet_3488 ddafdda52628c4edc71ead75fc05e01e 336 SUPERFAMILY SSF55729 139 302 7.06E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2363 f403df7c719cb0a6bf21ef57a4549e39 149 Pfam PF12821 Threonine/Serine exporter, ThrE 8 133 8.2E-36 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE Amet_0413 da18ce0545a554d4805622eb6d0817c2 188 Pfam PF11985 Protein of unknown function (DUF3486) 11 158 1.4E-31 T 12-10-2018 IPR021874 Bacteriophage Mu, Gp27 Amet_1950 da18ce0545a554d4805622eb6d0817c2 188 Pfam PF11985 Protein of unknown function (DUF3486) 11 158 1.4E-31 T 12-10-2018 IPR021874 Bacteriophage Mu, Gp27 Amet_3959 52f7421bc1f9a24b231c487fd2a773cb 134 Gene3D G3DSA:1.10.357.10 9 130 1.5E-5 T 12-10-2018 Amet_3959 52f7421bc1f9a24b231c487fd2a773cb 134 SUPERFAMILY SSF48498 42 127 1.67E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Amet_2101 462fe7d3f6d1504a699925b2230a0bc8 223 Pfam PF07796 Protein of unknown function (DUF1638) 30 194 4.0E-45 T 12-10-2018 IPR012437 Domain of unknown function DUF1638 Amet_2315 f7514661c92699c56a15bfff59960a00 215 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 8 98 2.0E-21 T 12-10-2018 IPR013559 YheO-like Amet_2315 f7514661c92699c56a15bfff59960a00 215 Pfam PF08348 YheO-like PAS domain 9 120 4.1E-42 T 12-10-2018 IPR013559 YheO-like Amet_2315 f7514661c92699c56a15bfff59960a00 215 Pfam PF13309 HTH domain 148 209 1.2E-23 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Amet_0685 3a3408d2d2aaf6a48a07fcef43d4a78a 411 Pfam PF13556 PucR C-terminal helix-turn-helix domain 345 403 2.1E-19 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Amet_0685 3a3408d2d2aaf6a48a07fcef43d4a78a 411 Pfam PF07905 Purine catabolism regulatory protein-like family 12 129 9.9E-33 T 12-10-2018 IPR012914 Purine catabolism PurC-like domain Amet_0685 3a3408d2d2aaf6a48a07fcef43d4a78a 411 Gene3D G3DSA:1.10.10.2840 277 407 8.5E-21 T 12-10-2018 Amet_4782 03ab08448c298997e6beebb4a6d179bc 229 Pfam PF02674 Colicin V production protein 4 62 4.1E-10 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Amet_4782 03ab08448c298997e6beebb4a6d179bc 229 Pfam PF02674 Colicin V production protein 122 220 1.3E-11 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Amet_0264 ecc465baa68bc786692c982a081d72da 245 PIRSF PIRSF034981 158 244 0.0084 T 12-10-2018 IPR013372 Ethanolamine utilization, putative Amet_0264 ecc465baa68bc786692c982a081d72da 245 PIRSF PIRSF034981 1 174 6.4E-6 T 12-10-2018 IPR013372 Ethanolamine utilization, putative Amet_4649 095a31aed7a76f65ed1c6baa64ff7a5a 162 Gene3D G3DSA:1.10.4010.10 2 162 1.2E-13 T 12-10-2018 Amet_4649 095a31aed7a76f65ed1c6baa64ff7a5a 162 SUPERFAMILY SSF101386 3 162 2.14E-41 T 12-10-2018 Amet_4649 095a31aed7a76f65ed1c6baa64ff7a5a 162 PIRSF PIRSF030140 1 162 1.5E-51 T 12-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 Amet_4649 095a31aed7a76f65ed1c6baa64ff7a5a 162 Pfam PF08761 dUTPase 4 162 1.8E-43 T 12-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 Amet_2546 2e1eb20c7b31f005e9caa3ff1cf6aa65 105 Pfam PF09682 Bacteriophage holin of superfamily 6 (Holin_LLH) 6 94 4.1E-13 T 12-10-2018 IPR010026 Phage holin, LL-H family Amet_0832 e30f3a554099c48ee6b0e9c9c4ef1804 238 Pfam PF04474 Protein of unknown function (DUF554) 2 220 2.7E-81 T 12-10-2018 IPR007563 Protein of unknown function DUF554 Amet_1703 91d213f3dae37ea3993f9476d40cb81a 105 SUPERFAMILY SSF101386 34 90 4.86E-5 T 12-10-2018 Amet_0538 e10736ea6d45e8db6a0e082ec0abf2e4 428 Gene3D G3DSA:3.40.50.11440 34 275 7.4E-139 T 12-10-2018 Amet_0538 e10736ea6d45e8db6a0e082ec0abf2e4 428 Gene3D G3DSA:3.90.226.30 6 420 7.4E-139 T 12-10-2018 Amet_0538 e10736ea6d45e8db6a0e082ec0abf2e4 428 Pfam PF09861 Domain of unknown function (DUF2088) 8 207 6.4E-76 T 12-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 Amet_0147 58a2165936e36d8d8b23a50e2f920006 517 Pfam PF03806 AbgT putative transporter family 16 516 4.3E-202 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 Amet_3571 f43398bfbf20569f6ae6a3a46ffb2bf4 228 Pfam PF02080 TrkA-C domain 153 218 5.0E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Amet_3571 f43398bfbf20569f6ae6a3a46ffb2bf4 228 Gene3D G3DSA:3.30.70.1450 123 220 8.1E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_3571 f43398bfbf20569f6ae6a3a46ffb2bf4 228 SUPERFAMILY SSF116726 139 218 2.09E-14 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Amet_2226 c1e02fa6bad59b09a4608932b6e2f8c0 226 SMART SM00567 E-Z type HEAT repeats 142 171 0.074 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amet_2226 c1e02fa6bad59b09a4608932b6e2f8c0 226 SMART SM00567 E-Z type HEAT repeats 173 202 7.9E-4 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Amet_2226 c1e02fa6bad59b09a4608932b6e2f8c0 226 SUPERFAMILY SSF48371 109 204 3.15E-17 T 12-10-2018 IPR016024 Armadillo-type fold Amet_2226 c1e02fa6bad59b09a4608932b6e2f8c0 226 Pfam PF13646 HEAT repeats 137 211 4.6E-15 T 12-10-2018 Amet_2226 c1e02fa6bad59b09a4608932b6e2f8c0 226 Gene3D G3DSA:1.25.10.10 108 225 3.4E-19 T 12-10-2018 IPR011989 Armadillo-like helical Amet_1830 21cdd2c613d20ee372faef792c83680d 295 Pfam PF02374 Anion-transporting ATPase 4 287 8.1E-88 T 12-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Amet_1830 21cdd2c613d20ee372faef792c83680d 295 Gene3D G3DSA:3.40.50.300 1 285 3.6E-83 T 12-10-2018 Amet_1830 21cdd2c613d20ee372faef792c83680d 295 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 7 283 1.7E-78 T 12-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Amet_1830 21cdd2c613d20ee372faef792c83680d 295 SUPERFAMILY SSF52540 6 267 5.65E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1656 902f6efba256f2576b9dac9844d3331c 82 Gene3D G3DSA:3.40.1440.10 1 82 8.7E-31 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amet_1656 902f6efba256f2576b9dac9844d3331c 82 SUPERFAMILY SSF82771 1 71 7.59E-15 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amet_1656 902f6efba256f2576b9dac9844d3331c 82 Pfam PF01541 GIY-YIG catalytic domain 2 71 8.6E-18 T 12-10-2018 IPR000305 GIY-YIG endonuclease Amet_4740 440e9c542f546b338c47f16cb559fad5 490 Pfam PF12704 MacB-like periplasmic core domain 14 209 1.1E-13 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Amet_1455 ade9873ece69052c981a857004574858 170 SUPERFAMILY SSF55729 7 169 1.26E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_1455 ade9873ece69052c981a857004574858 170 Gene3D G3DSA:3.40.630.30 3 169 1.3E-39 T 12-10-2018 Amet_1455 ade9873ece69052c981a857004574858 170 Pfam PF00583 Acetyltransferase (GNAT) family 38 143 2.9E-18 T 12-10-2018 IPR000182 GNAT domain Amet_1239 c173730f16c6cd816be5821047104452 126 Pfam PF04205 FMN-binding domain 50 122 1.1E-13 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_1239 c173730f16c6cd816be5821047104452 126 Gene3D G3DSA:3.90.1010.20 73 126 2.5E-6 T 12-10-2018 Amet_1239 c173730f16c6cd816be5821047104452 126 SMART SM00900 50 125 1.8E-17 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_1201 e703f662f786d66e4a9dbec920883a3d 60 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 20 29 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Amet_1201 e703f662f786d66e4a9dbec920883a3d 60 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 6 54 2.3E-15 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Amet_1201 e703f662f786d66e4a9dbec920883a3d 60 Gene3D G3DSA:1.10.8.910 7 59 2.8E-14 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily Amet_1393 2bfb2039f58e67204b34c7d75764689c 406 SUPERFAMILY SSF52218 186 295 1.18E-12 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1393 2bfb2039f58e67204b34c7d75764689c 406 Gene3D G3DSA:3.40.50.360 186 296 3.5E-7 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1393 2bfb2039f58e67204b34c7d75764689c 406 SUPERFAMILY SSF52218 26 101 8.38E-11 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1393 2bfb2039f58e67204b34c7d75764689c 406 Gene3D G3DSA:3.40.50.360 14 143 3.4E-12 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_2604 6e4e386f5b1165443bc4c773b6ec6605 264 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 6 185 4.8E-48 T 12-10-2018 IPR010183 Bacteriophage lambda, Bet Amet_2604 6e4e386f5b1165443bc4c773b6ec6605 264 Pfam PF03837 RecT family 22 191 3.3E-40 T 12-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 Amet_0856 dd800f1d5037befec1faeaa2ff75f625 263 Pfam PF06114 IrrE N-terminal-like domain 48 168 7.5E-17 T 12-10-2018 IPR010359 IrrE N-terminal-like domain Amet_2038 be47f72f43f252152bf0eab71e7409b1 317 SUPERFAMILY SSF52540 13 245 7.8E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_2038 be47f72f43f252152bf0eab71e7409b1 317 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 314 2.1E-14 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2038 be47f72f43f252152bf0eab71e7409b1 317 Pfam PF00005 ABC transporter 40 183 1.2E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_2038 be47f72f43f252152bf0eab71e7409b1 317 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Amet_2038 be47f72f43f252152bf0eab71e7409b1 317 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 296 1.7E-10 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Amet_2038 be47f72f43f252152bf0eab71e7409b1 317 SMART SM00382 47 232 1.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_2038 be47f72f43f252152bf0eab71e7409b1 317 Gene3D G3DSA:3.40.50.300 11 317 6.7E-61 T 12-10-2018 Amet_2995 cf4e7854f004e5b05dafae7f3ab9b9a1 155 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 145 25.298 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 Amet_2995 cf4e7854f004e5b05dafae7f3ab9b9a1 155 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 16 143 1.4E-40 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 Amet_4664 c07a092c7abefd1e8670e9f1a5041a87 160 Pfam PF04308 Ribonuclease H-like 13 154 8.1E-49 T 12-10-2018 IPR007405 Bacteriophage KVP40, Orf299 Amet_4158 d64ed12b97d8651861d1f5dbd4723b41 88 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 5.0E-17 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 Amet_1699 af1425897f758b7db9812c1b560404e2 390 Pfam PF01963 TraB family 5 226 1.6E-35 T 12-10-2018 IPR002816 Pheromone shutdown, TraB Amet_1699 af1425897f758b7db9812c1b560404e2 390 TIGRFAM TIGR00261 traB: TraB family protein 10 383 1.4E-107 T 12-10-2018 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal Amet_0514 f4f5aef392d9556ac0db2d10aac98c9f 517 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 40 507 9.2E-183 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_0514 f4f5aef392d9556ac0db2d10aac98c9f 517 PIRSF PIRSF005690 27 517 3.0E-178 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_2072 cac0689a980f73ba8f8ec4940033fbe7 143 Gene3D G3DSA:1.10.10.10 1 143 8.6E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2072 cac0689a980f73ba8f8ec4940033fbe7 143 SUPERFAMILY SSF46785 8 140 2.41E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2072 cac0689a980f73ba8f8ec4940033fbe7 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 3.5E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_2072 cac0689a980f73ba8f8ec4940033fbe7 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 3.5E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_2072 cac0689a980f73ba8f8ec4940033fbe7 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 3.5E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_2072 cac0689a980f73ba8f8ec4940033fbe7 143 Pfam PF01047 MarR family 37 94 4.4E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_2072 cac0689a980f73ba8f8ec4940033fbe7 143 SMART SM00347 30 128 6.5E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_2076 3f7422b7f8ef1428e8b421c9ac15eef3 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 258 1.8E-39 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_1467 bf4c93c9abc0abd7de31a3a99db53d3e 118 SUPERFAMILY SSF53146 1 116 6.41E-34 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Amet_1467 bf4c93c9abc0abd7de31a3a99db53d3e 118 Gene3D G3DSA:3.30.420.130 1 104 1.4E-29 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Amet_1467 bf4c93c9abc0abd7de31a3a99db53d3e 118 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 96 1.1E-20 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Amet_3314 292c1757266f2fff55790983fd03af91 164 Pfam PF04024 PspC domain 3 59 1.3E-22 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Amet_4719 5713d5042375f16fb0ad1bc006548a4f 281 SUPERFAMILY SSF52540 3 253 7.38E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4719 5713d5042375f16fb0ad1bc006548a4f 281 Gene3D G3DSA:3.40.50.300 1 279 4.3E-67 T 12-10-2018 Amet_4719 5713d5042375f16fb0ad1bc006548a4f 281 Pfam PF00005 ABC transporter 21 178 3.3E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_4719 5713d5042375f16fb0ad1bc006548a4f 281 SMART SM00382 30 228 4.9E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_0760 13dc91ae28830117255ba8c3e9bb0ea3 167 Pfam PF00881 Nitroreductase family 4 56 3.0E-17 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amet_0760 13dc91ae28830117255ba8c3e9bb0ea3 167 Pfam PF00881 Nitroreductase family 65 146 6.2E-8 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amet_0760 13dc91ae28830117255ba8c3e9bb0ea3 167 Gene3D G3DSA:3.40.109.10 1 167 7.4E-51 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_0760 13dc91ae28830117255ba8c3e9bb0ea3 167 SUPERFAMILY SSF55469 4 165 6.54E-47 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_0334 0cc9d2d362192cf933457d774c115661 404 Pfam PF01098 Cell cycle protein 60 391 8.8E-79 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_1318 cd0bc4b015868ac32f2ec71c4f7b0421 128 Gene3D G3DSA:1.10.287.1080 16 106 7.5E-10 T 12-10-2018 Amet_1318 cd0bc4b015868ac32f2ec71c4f7b0421 128 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 101 4.1E-8 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Amet_1318 cd0bc4b015868ac32f2ec71c4f7b0421 128 SUPERFAMILY SSF101386 21 102 3.75E-7 T 12-10-2018 Amet_2683 dbfb1edce8f49a12fadaf6fbdcedfc5a 260 Pfam PF01148 Cytidylyltransferase family 3 257 1.7E-56 T 12-10-2018 Amet_1381 b96939f59c4209f925bf596320e9fc9e 78 Gene3D G3DSA:3.30.70.930 1 77 2.2E-14 T 12-10-2018 IPR029756 MTH1187/YkoF-like Amet_1381 b96939f59c4209f925bf596320e9fc9e 78 Pfam PF01910 Thiamine-binding protein 4 74 1.5E-7 T 12-10-2018 IPR002767 Thiamine-binding protein Amet_1381 b96939f59c4209f925bf596320e9fc9e 78 SUPERFAMILY SSF89957 2 76 3.4E-13 T 12-10-2018 IPR029756 MTH1187/YkoF-like Amet_1391 6fce11c4f9314cf3bb587d4b8f8ed746 140 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 136 1.4E-24 T 12-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Amet_1554 f7988cf67f2acd6ba5550b5b09ca4efa 403 Pfam PF12704 MacB-like periplasmic core domain 21 242 7.7E-25 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Amet_1554 f7988cf67f2acd6ba5550b5b09ca4efa 403 Pfam PF02687 FtsX-like permease family 309 396 1.4E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_0077 c02b687ee77d10ada7cee33652bfbb29 258 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 250 1.4E-66 T 12-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Amet_0077 c02b687ee77d10ada7cee33652bfbb29 258 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 247 5.0E-78 T 12-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Amet_0637 4c861aad4d8badb202f406b2fd1feed2 245 Gene3D G3DSA:3.30.70.1880 89 245 1.7E-36 T 12-10-2018 Amet_0637 4c861aad4d8badb202f406b2fd1feed2 245 Pfam PF05949 Bacterial protein of unknown function (DUF881) 91 240 3.6E-37 T 12-10-2018 IPR010273 Protein of unknown function DUF881 Amet_0310 0a553cf572c4a6c39f769acf96633e50 576 Pfam PF08757 CotH kinase protein 81 420 7.3E-87 T 12-10-2018 IPR014867 Spore coat protein CotH Amet_1234 f0690ff5d2f17db5583689947153943d 346 PIRSF PIRSF006268 4 340 6.9E-104 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Amet_1234 f0690ff5d2f17db5583689947153943d 346 SUPERFAMILY SSF143631 36 334 4.45E-96 T 12-10-2018 IPR003374 ApbE-like superfamily Amet_1234 f0690ff5d2f17db5583689947153943d 346 Gene3D G3DSA:3.10.520.20 25 346 2.0E-113 T 12-10-2018 Amet_1234 f0690ff5d2f17db5583689947153943d 346 Pfam PF02424 ApbE family 40 315 5.5E-86 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Amet_2411 9753a1be704733464d3439198f2c183d 577 Gene3D G3DSA:3.40.50.300 48 272 3.6E-19 T 12-10-2018 Amet_2411 9753a1be704733464d3439198f2c183d 577 Pfam PF03354 Phage Terminase 106 554 3.2E-47 T 12-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type Amet_3330 915e1c67b9d6ae126ca4390fca952140 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 321 2.1E-43 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_3330 915e1c67b9d6ae126ca4390fca952140 323 SUPERFAMILY SSF161098 91 305 1.16E-18 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3330 915e1c67b9d6ae126ca4390fca952140 323 Gene3D G3DSA:1.10.3720.10 85 316 7.1E-22 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3459 59c1c5bbc54cd863239044799b3c9f6f 326 Pfam PF14249 Tocopherol cyclase 132 317 2.9E-14 T 12-10-2018 IPR025893 Tocopherol cyclase GO:0009976 Amet_3459 59c1c5bbc54cd863239044799b3c9f6f 326 SUPERFAMILY SSF159245 20 238 2.09E-16 T 12-10-2018 Amet_3319 84af69af6f883923ae3659ffcb4360bf 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 281 5.0E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_3319 84af69af6f883923ae3659ffcb4360bf 292 Gene3D G3DSA:1.10.3720.10 48 290 2.6E-68 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3319 84af69af6f883923ae3659ffcb4360bf 292 SUPERFAMILY SSF161098 52 279 9.42E-58 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4775 3b375240a823399d2455183fbc9de19d 107 Pfam PF10704 Protein of unknown function (DUF2508) 43 103 2.3E-12 T 12-10-2018 IPR019644 Protein of unknown function DUF2508 Amet_2240 4e7b257e2a8a24cbdcfeda2446c14b0a 164 Gene3D G3DSA:3.30.460.40 1 153 1.9E-47 T 12-10-2018 Amet_2240 4e7b257e2a8a24cbdcfeda2446c14b0a 164 SUPERFAMILY SSF81301 10 138 2.09E-5 T 12-10-2018 Amet_2240 4e7b257e2a8a24cbdcfeda2446c14b0a 164 Pfam PF10706 Aminoglycoside-2''-adenylyltransferase 10 142 5.5E-10 T 12-10-2018 IPR019646 Aminoglycoside-2''-adenylyltransferase Amet_0738 fb01779037f3dc4b771ea17f3838db00 51 Pfam PF14070 Putative motility protein 3 42 7.0E-11 T 12-10-2018 IPR025906 Putative motility protein Amet_1040 ea20c8be5ff5b88a384a5cad68a0dad0 121 Gene3D G3DSA:1.10.10.10 10 98 1.7E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_1040 ea20c8be5ff5b88a384a5cad68a0dad0 121 SMART SM00421 34 92 0.0021 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_1040 ea20c8be5ff5b88a384a5cad68a0dad0 121 SUPERFAMILY SSF46894 29 87 3.27E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Amet_1040 ea20c8be5ff5b88a384a5cad68a0dad0 121 Pfam PF00196 Bacterial regulatory proteins, luxR family 37 87 1.8E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Amet_0055 66072b78537d035319b9b1830cf2d7b3 134 Gene3D G3DSA:3.30.110.40 63 133 1.5E-13 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_0055 66072b78537d035319b9b1830cf2d7b3 134 SUPERFAMILY SSF64307 55 133 2.88E-15 T 12-10-2018 IPR036868 TusA-like domain superfamily Amet_0055 66072b78537d035319b9b1830cf2d7b3 134 Pfam PF01206 Sulfurtransferase TusA 65 132 1.6E-15 T 12-10-2018 IPR001455 TusA-like domain Amet_4355 8beac7151b45ce2f3518853e9c9d2ad8 334 Pfam PF11863 Protein of unknown function (DUF3383) 89 324 3.6E-16 T 12-10-2018 IPR021808 Protein of unknown function DUF3383 Amet_1963 8beac7151b45ce2f3518853e9c9d2ad8 334 Pfam PF11863 Protein of unknown function (DUF3383) 89 324 3.6E-16 T 12-10-2018 IPR021808 Protein of unknown function DUF3383 Amet_0426 8beac7151b45ce2f3518853e9c9d2ad8 334 Pfam PF11863 Protein of unknown function (DUF3383) 89 324 3.6E-16 T 12-10-2018 IPR021808 Protein of unknown function DUF3383 Amet_2004 50edb876b30f30fa362af788b3581661 417 Pfam PF12679 ABC-2 family transporter protein 21 413 1.3E-6 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Amet_0041 0c20e7f1a2c58fb1adf9bed132aae0e9 463 Pfam PF07969 Amidohydrolase family 352 434 1.5E-15 T 12-10-2018 IPR013108 Amidohydrolase 3 Amet_0041 0c20e7f1a2c58fb1adf9bed132aae0e9 463 Pfam PF07969 Amidohydrolase family 43 223 1.2E-8 T 12-10-2018 IPR013108 Amidohydrolase 3 Amet_0041 0c20e7f1a2c58fb1adf9bed132aae0e9 463 SUPERFAMILY SSF51556 55 390 8.29E-53 T 12-10-2018 IPR032466 Metal-dependent hydrolase Amet_0041 0c20e7f1a2c58fb1adf9bed132aae0e9 463 Gene3D G3DSA:3.20.20.140 54 274 3.2E-49 T 12-10-2018 Amet_0041 0c20e7f1a2c58fb1adf9bed132aae0e9 463 Gene3D G3DSA:3.20.20.140 285 385 2.3E-23 T 12-10-2018 Amet_0041 0c20e7f1a2c58fb1adf9bed132aae0e9 463 SUPERFAMILY SSF51338 1 435 1.18E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Amet_3856 006317109ae876088afb50d84b275053 148 Pfam PF01169 Uncharacterized protein family UPF0016 102 143 5.6E-9 T 12-10-2018 IPR001727 Gdt1 family Amet_3856 006317109ae876088afb50d84b275053 148 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 4.4E-22 T 12-10-2018 IPR001727 Gdt1 family Amet_1370 ae03a100bc1c3ac3f947de5922db5076 210 Gene3D G3DSA:2.60.120.40 73 210 3.0E-6 T 12-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 Amet_1370 ae03a100bc1c3ac3f947de5922db5076 210 Pfam PF01391 Collagen triple helix repeat (20 copies) 9 67 6.8E-8 T 12-10-2018 IPR008160 Collagen triple helix repeat Amet_1276 7dd5a5df8a1a1ca5c2b5a934af083707 273 Gene3D G3DSA:1.10.3720.10 75 267 1.5E-20 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1276 7dd5a5df8a1a1ca5c2b5a934af083707 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 266 2.6E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1276 7dd5a5df8a1a1ca5c2b5a934af083707 273 SUPERFAMILY SSF161098 75 256 2.88E-27 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1267 b31bc614252f30f31dac97be047e7b79 494 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 16 434 2.7E-132 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane Amet_4679 c1c4239e9b386f6dac9ccbc64ac9f268 126 Pfam PF09851 Short C-terminal domain 95 119 2.9E-6 T 12-10-2018 IPR018649 SHOCT domain Amet_4178 5ccacb0f8646c297912a27cc4830dc94 85 Gene3D G3DSA:3.30.1370.80 6 85 2.1E-5 T 12-10-2018 IPR036473 Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain superfamily Amet_1909 5a4e300dc4b8f4d4d40235c980a327ce 359 Gene3D G3DSA:2.120.10.30 209 357 7.0E-11 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Amet_1909 5a4e300dc4b8f4d4d40235c980a327ce 359 SUPERFAMILY SSF82171 98 357 3.81E-17 T 12-10-2018 Amet_1160 bf58fac1e9de21d41b5bc6a98c01e2b5 280 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 23 267 6.3E-78 T 12-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 Amet_1160 bf58fac1e9de21d41b5bc6a98c01e2b5 280 SUPERFAMILY SSF161098 73 259 5.63E-34 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1160 bf58fac1e9de21d41b5bc6a98c01e2b5 280 Gene3D G3DSA:1.10.3720.10 67 267 1.7E-30 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1160 bf58fac1e9de21d41b5bc6a98c01e2b5 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 256 2.3E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1857 8c1ddbc47016952f6157bf6021fcf82b 95 TIGRFAM TIGR04104 cxxc_20_cxxc: cxxc_20_cxxc protein 5 94 1.5E-25 T 12-10-2018 IPR026369 CxxC-20-CxxC protein Amet_0524 b1344d4f50b59e491ab172c90951d28b 253 Pfam PF02361 Cobalt transport protein 21 219 1.6E-22 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Amet_4606 eaa355c97b31a7c8f028b7f8d8abc48d 765 Pfam PF00395 S-layer homology domain 643 685 9.6E-4 T 12-10-2018 IPR001119 S-layer homology domain Amet_0085 da19b375abbc27b88b829dfd6cbea7a0 298 Pfam PF04468 PSP1 C-terminal conserved region 61 146 1.1E-32 T 12-10-2018 IPR007557 PSP1, C-terminal Amet_1629 55b6595822053d821644b857ea221a88 303 Pfam PF08812 YtxC-like family 70 286 1.4E-67 T 12-10-2018 IPR014199 Sporulation protein YtxC Amet_1148 93b31ed865d89e5970621f240aae3ac9 91 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 1 84 7.9E-23 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Amet_2980 f8153e086c4cf2868d0ae86bfc019082 498 Pfam PF00474 Sodium:solute symporter family 35 440 2.3E-53 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amet_2980 f8153e086c4cf2868d0ae86bfc019082 498 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 440 2.4E-55 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Amet_2980 f8153e086c4cf2868d0ae86bfc019082 498 Gene3D G3DSA:1.20.1730.10 25 496 4.8E-75 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily Amet_0757 a20103d253c609a49a004c2cb4c6dedc 443 Pfam PF07670 Nucleoside recognition 134 228 3.8E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Amet_1123 cc03544fd342a52ea680b94d51f800c4 315 PIRSF PIRSF039012 1 315 5.9E-94 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Amet_1123 cc03544fd342a52ea680b94d51f800c4 315 Gene3D G3DSA:3.40.630.10 6 313 1.0E-79 T 12-10-2018 Amet_1123 cc03544fd342a52ea680b94d51f800c4 315 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 39 303 9.5E-30 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Amet_1123 cc03544fd342a52ea680b94d51f800c4 315 SUPERFAMILY SSF53187 28 305 5.62E-42 T 12-10-2018 Amet_1324 d20f8885d4bb72221cb4897a71a5c61c 299 Pfam PF00005 ABC transporter 17 154 5.9E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_1324 d20f8885d4bb72221cb4897a71a5c61c 299 SMART SM00382 26 203 4.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain Amet_1324 d20f8885d4bb72221cb4897a71a5c61c 299 Gene3D G3DSA:3.40.50.300 1 227 5.1E-49 T 12-10-2018 Amet_1324 d20f8885d4bb72221cb4897a71a5c61c 299 SUPERFAMILY SSF52540 2 217 3.91E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1152 5f8ef1692a168ad1a03ca6c028a2d5b6 141 Pfam PF06754 Phosphonate metabolism protein PhnG 2 138 3.5E-31 T 12-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_1152 5f8ef1692a168ad1a03ca6c028a2d5b6 141 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 2 139 1.7E-30 T 12-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Amet_2404 353519360a68dba929ab4fa46ec342b8 61 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 4 54 3.4E-11 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Amet_2404 353519360a68dba929ab4fa46ec342b8 61 Gene3D G3DSA:1.10.8.910 4 61 2.3E-13 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily Amet_0841 7678b4ebbc3a98dccfe9c3b2575a47ba 276 Pfam PF02498 BRO family, N-terminal domain 15 101 5.2E-32 T 12-10-2018 IPR003497 BRO N-terminal domain Amet_0841 7678b4ebbc3a98dccfe9c3b2575a47ba 276 Pfam PF03374 Phage antirepressor protein KilAC domain 144 247 8.0E-33 T 12-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 Amet_0841 7678b4ebbc3a98dccfe9c3b2575a47ba 276 SMART SM01040 15 101 1.7E-45 T 12-10-2018 IPR003497 BRO N-terminal domain Amet_2287 e1cf70f50a425af1f35db237a261316b 82 Pfam PF14209 Domain of unknown function (DUF4321) 32 79 1.1E-10 T 12-10-2018 IPR025470 Protein of unknown function DUF4321 Amet_3993 3ad4d90466a363f664d6302c1c3ffc4f 319 Gene3D G3DSA:3.90.1530.30 41 102 1.0E-14 T 12-10-2018 Amet_3993 3ad4d90466a363f664d6302c1c3ffc4f 319 SMART SM00470 27 117 4.1E-16 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_3993 3ad4d90466a363f664d6302c1c3ffc4f 319 Pfam PF02195 ParB-like nuclease domain 44 116 1.5E-14 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_3993 3ad4d90466a363f664d6302c1c3ffc4f 319 SUPERFAMILY SSF110849 27 119 1.17E-17 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Amet_2184 0f7762e69df191060a90bf9f8adf96ab 318 Gene3D G3DSA:3.40.50.1390 28 162 1.5E-18 T 12-10-2018 Amet_2184 0f7762e69df191060a90bf9f8adf96ab 318 SMART SM00857 30 180 1.7E-30 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_2184 0f7762e69df191060a90bf9f8adf96ab 318 Pfam PF00239 Resolvase, N terminal domain 30 178 5.0E-23 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Amet_2184 0f7762e69df191060a90bf9f8adf96ab 318 SUPERFAMILY SSF53041 30 180 2.75E-23 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Amet_2184 0f7762e69df191060a90bf9f8adf96ab 318 Gene3D G3DSA:1.10.10.2600 164 304 4.4E-5 T 12-10-2018 IPR038109 DNA-binding recombinase domain superfamily Amet_3018 df9d1be026fa78e6467b1dd908eafaf9 107 Pfam PF03551 Transcriptional regulator PadR-like family 16 88 8.1E-21 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal Amet_3018 df9d1be026fa78e6467b1dd908eafaf9 107 SUPERFAMILY SSF46785 5 105 6.13E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3018 df9d1be026fa78e6467b1dd908eafaf9 107 Gene3D G3DSA:1.10.10.10 1 107 1.5E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_2541 f0419386b9a0b5ccece1c58a255cf369 80 SUPERFAMILY SSF50182 6 65 1.85E-25 T 12-10-2018 IPR010920 LSM domain superfamily Amet_2541 f0419386b9a0b5ccece1c58a255cf369 80 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 1.7E-32 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Amet_2541 f0419386b9a0b5ccece1c58a255cf369 80 Pfam PF17209 Hfq protein 7 69 1.1E-33 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Amet_2541 f0419386b9a0b5ccece1c58a255cf369 80 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 30.434 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Amet_2541 f0419386b9a0b5ccece1c58a255cf369 80 Gene3D G3DSA:2.30.30.100 1 73 7.0E-33 T 12-10-2018 Amet_0146 21cf5b5f5a4e6064082a01d4ff481f7b 517 Pfam PF03806 AbgT putative transporter family 16 516 6.4E-205 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 Amet_1874 b706837019947790ec16d4119902df37 109 Pfam PF11345 Protein of unknown function (DUF3147) 10 103 3.7E-5 T 12-10-2018 IPR021493 Protein of unknown function DUF3147 Amet_3780 888690325ef5864c1e76f837e656f05b 50 Gene3D G3DSA:1.10.1530.10 1 39 7.4E-6 T 12-10-2018 Amet_0268 e5af0ddac758e93f108afa0561e89cbd 367 PIRSF PIRSF019466 1 367 1.4E-153 T 12-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 Amet_0268 e5af0ddac758e93f108afa0561e89cbd 367 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 353 8.7E-157 T 12-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 Amet_3966 0176c38a3b69c69de80a41b0b5fce25b 563 Pfam PF03235 Protein of unknown function DUF262 13 268 1.1E-33 T 12-10-2018 IPR004919 Domain of unknown function DUF262 Amet_0140 3d91799af4d86ecca7b212a4602a172f 335 Pfam PF01699 Sodium/calcium exchanger protein 184 332 1.1E-14 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Amet_0140 3d91799af4d86ecca7b212a4602a172f 335 Pfam PF01699 Sodium/calcium exchanger protein 6 148 9.7E-14 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Amet_0140 3d91799af4d86ecca7b212a4602a172f 335 Gene3D G3DSA:1.20.58.1130 8 217 5.8E-42 T 12-10-2018 Amet_0140 3d91799af4d86ecca7b212a4602a172f 335 Gene3D G3DSA:1.20.1420.30 35 325 5.8E-42 T 12-10-2018 Amet_4628 35948452f889fe4e8ece9a09def31173 558 SUPERFAMILY SSF161098 330 550 1.05E-40 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4628 35948452f889fe4e8ece9a09def31173 558 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 391 548 2.2E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_4628 35948452f889fe4e8ece9a09def31173 558 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 292 4.1E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_4628 35948452f889fe4e8ece9a09def31173 558 SUPERFAMILY SSF161098 44 296 1.12E-49 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4628 35948452f889fe4e8ece9a09def31173 558 Gene3D G3DSA:1.10.3720.10 321 557 4.3E-38 T 12-10-2018 IPR035906 MetI-like superfamily Amet_4628 35948452f889fe4e8ece9a09def31173 558 Gene3D G3DSA:1.10.3720.10 43 304 2.5E-59 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2550 782a8de126d0b973fc5be6e8f45bc65f 360 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 71 289 1.9E-23 T 12-10-2018 IPR000477 Reverse transcriptase domain Amet_2550 782a8de126d0b973fc5be6e8f45bc65f 360 SUPERFAMILY SSF56672 27 336 3.84E-34 T 12-10-2018 Amet_1474 5313ccf9e3d684cd15382342b2ea7693 193 Pfam PF01965 DJ-1/PfpI family 6 174 8.6E-23 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Amet_1474 5313ccf9e3d684cd15382342b2ea7693 193 Gene3D G3DSA:3.40.50.880 1 193 4.3E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_1474 5313ccf9e3d684cd15382342b2ea7693 193 SUPERFAMILY SSF52317 5 192 1.87E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like Amet_0311 a6378b61d0f29701c3f84a113141d948 357 Pfam PF01757 Acyltransferase family 13 328 2.1E-34 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Amet_2455 4bbcd6138ca3f7b4f609d6f976eeebf7 182 SUPERFAMILY SSF50346 94 157 1.2E-8 T 12-10-2018 IPR011033 PRC-barrel-like superfamily Amet_2455 4bbcd6138ca3f7b4f609d6f976eeebf7 182 Pfam PF05239 PRC-barrel domain 94 158 1.9E-9 T 12-10-2018 IPR027275 PRC-barrel domain Amet_3433 ac714aba2ed11e72c3121129736f60ab 113 SUPERFAMILY SSF55008 43 110 5.89E-5 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_1081 8e286a886b8e8958a7f9737f85e81157 207 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 5 207 37.547 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Amet_1081 8e286a886b8e8958a7f9737f85e81157 207 Gene3D G3DSA:3.20.20.70 4 207 6.2E-70 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Amet_1081 8e286a886b8e8958a7f9737f85e81157 207 SUPERFAMILY SSF51366 5 204 7.69E-54 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Amet_1081 8e286a886b8e8958a7f9737f85e81157 207 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 202 3.9E-49 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Amet_3377 503698a00cc361e0b1dbbe167c94347e 320 Gene3D G3DSA:3.40.33.10 67 317 5.4E-52 T 12-10-2018 IPR035940 CAP superfamily Amet_3377 503698a00cc361e0b1dbbe167c94347e 320 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 193 316 1.8E-54 T 12-10-2018 IPR014258 CAP domain, YkwD-like Amet_3377 503698a00cc361e0b1dbbe167c94347e 320 Pfam PF00188 Cysteine-rich secretory protein family 200 314 6.5E-14 T 12-10-2018 IPR014044 CAP domain Amet_3377 503698a00cc361e0b1dbbe167c94347e 320 SUPERFAMILY SSF55797 193 315 4.45E-21 T 12-10-2018 IPR035940 CAP superfamily Amet_1315 ef4d4081f8bc829827496476a194ef71 137 Pfam PF13276 HTH-like domain 27 83 3.9E-14 T 12-10-2018 IPR025948 HTH-like domain Amet_4793 2061678633ee3f6f5de98fc628328d96 89 Pfam PF01169 Uncharacterized protein family UPF0016 7 81 2.2E-24 T 12-10-2018 IPR001727 Gdt1 family Amet_3187 1c86d871c7905b5720067fc269066b46 200 PIRSF PIRSF006091 1 200 2.4E-26 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Amet_3187 1c86d871c7905b5720067fc269066b46 200 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 19.194 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Amet_3187 1c86d871c7905b5720067fc269066b46 200 SMART SM00900 99 192 1.8E-22 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_3187 1c86d871c7905b5720067fc269066b46 200 Pfam PF04205 FMN-binding domain 101 189 1.4E-15 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Amet_0654 96d3b4c69cd1e7c0d6517c5722ba8a34 144 Gene3D G3DSA:3.90.1720.10 6 144 1.1E-18 T 12-10-2018 Amet_0654 96d3b4c69cd1e7c0d6517c5722ba8a34 144 Pfam PF00877 NlpC/P60 family 21 138 2.3E-8 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Amet_0654 96d3b4c69cd1e7c0d6517c5722ba8a34 144 SUPERFAMILY SSF54001 6 142 1.37E-16 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Amet_4762 9828c88413c2ad0393652cd1838ba4ad 502 SUPERFAMILY SSF55486 285 498 1.44E-43 T 12-10-2018 Amet_4762 9828c88413c2ad0393652cd1838ba4ad 502 Gene3D G3DSA:1.10.390.60 266 500 2.9E-46 T 12-10-2018 Amet_4762 9828c88413c2ad0393652cd1838ba4ad 502 Pfam PF01433 Peptidase family M1 domain 283 496 6.2E-26 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Amet_3727 cbb1a1ca9edab718596618c3db4dc238 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 415 3.7E-94 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Amet_3727 cbb1a1ca9edab718596618c3db4dc238 425 PIRSF PIRSF006066 1 425 1.1E-110 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_3727 cbb1a1ca9edab718596618c3db4dc238 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 420 4.2E-100 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Amet_3740 92c80c99cc36a25b82629889ee136bb5 306 SUPERFAMILY SSF103481 39 138 1.31E-17 T 12-10-2018 Amet_3740 92c80c99cc36a25b82629889ee136bb5 306 Pfam PF00892 EamA-like transporter family 9 137 5.0E-29 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_3740 92c80c99cc36a25b82629889ee136bb5 306 Pfam PF00892 EamA-like transporter family 153 286 2.5E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Amet_3740 92c80c99cc36a25b82629889ee136bb5 306 SUPERFAMILY SSF103481 187 287 1.44E-9 T 12-10-2018 Amet_4143 bc78a1a0d2e027c19da2bd9c7998e021 116 SUPERFAMILY SSF50118 2 113 1.36E-42 T 12-10-2018 Amet_4143 bc78a1a0d2e027c19da2bd9c7998e021 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 110 1.8E-33 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Amet_4143 bc78a1a0d2e027c19da2bd9c7998e021 116 Gene3D G3DSA:2.30.30.110 1 116 1.1E-52 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Amet_4143 bc78a1a0d2e027c19da2bd9c7998e021 116 PIRSF PIRSF033490 1 113 9.8E-38 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Amet_4057 8a281f7d2fb2515791051d58cfc06d8e 383 SUPERFAMILY SSF116734 186 381 2.62E-29 T 12-10-2018 Amet_4057 8a281f7d2fb2515791051d58cfc06d8e 383 Gene3D G3DSA:1.10.287.1120 142 376 3.0E-51 T 12-10-2018 Amet_4057 8a281f7d2fb2515791051d58cfc06d8e 383 SUPERFAMILY SSF116734 12 192 2.78E-23 T 12-10-2018 Amet_4057 8a281f7d2fb2515791051d58cfc06d8e 383 Gene3D G3DSA:3.90.220.20 63 380 3.0E-51 T 12-10-2018 Amet_4057 8a281f7d2fb2515791051d58cfc06d8e 383 Pfam PF01420 Type I restriction modification DNA specificity domain 59 169 3.9E-11 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Amet_4057 8a281f7d2fb2515791051d58cfc06d8e 383 Pfam PF01420 Type I restriction modification DNA specificity domain 196 360 2.7E-10 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 Amet_4057 8a281f7d2fb2515791051d58cfc06d8e 383 Gene3D G3DSA:3.90.220.20 198 332 3.0E-51 T 12-10-2018 Amet_1025 7962ee62dc830acc88af5e8bf954ccad 68 SUPERFAMILY SSF140500 8 61 8.11E-7 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 Amet_1025 7962ee62dc830acc88af5e8bf954ccad 68 Pfam PF09388 Spo0E like sporulation regulatory protein 12 54 9.2E-10 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 Amet_4597 0105be6f3002fe1aeee1995b96fe49d7 366 Pfam PF03845 Spore germination protein 7 323 4.3E-56 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_4597 0105be6f3002fe1aeee1995b96fe49d7 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 363 9.6E-66 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Amet_4597 0105be6f3002fe1aeee1995b96fe49d7 366 Gene3D G3DSA:1.20.1740.10 3 364 3.5E-8 T 12-10-2018 Amet_4272 98cd0148137c01c624645c2a9abcf29f 97 Pfam PF07875 Coat F domain 16 77 8.4E-16 T 12-10-2018 IPR012851 Spore coat protein CotF-like Amet_4244 ce4f89930a1c3826907592c56868c635 431 Pfam PF03600 Citrate transporter 14 366 1.5E-42 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Amet_4244 ce4f89930a1c3826907592c56868c635 431 TIGRFAM TIGR00784 citMHS: citrate transporter 1 430 8.9E-139 T 12-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 Amet_2901 fb928c8f365f0e9ab0fc98a11ace0b19 87 Pfam PF03698 Uncharacterised protein family (UPF0180) 4 59 2.0E-10 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 Amet_4704 e9527c51b81ca2c7c84f5716dbc0e583 179 Pfam PF08905 Domain of unknown function (DUF1850) 64 144 5.3E-18 T 12-10-2018 IPR015001 Protein of unknown function DUF1850 Amet_0069 368b77474dbd0305a6811bbf9d4dd741 206 SUPERFAMILY SSF63965 9 205 3.01E-74 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Amet_0069 368b77474dbd0305a6811bbf9d4dd741 206 Gene3D G3DSA:3.40.50.10230 1 206 1.6E-85 T 12-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Amet_0069 368b77474dbd0305a6811bbf9d4dd741 206 Pfam PF02570 Precorrin-8X methylmutase 9 204 1.7E-82 T 12-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 Amet_1329 b814a5f06274f53ad1c7c719e255b6e7 227 Pfam PF02613 Nitrate reductase delta subunit 60 191 5.4E-31 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Amet_1329 b814a5f06274f53ad1c7c719e255b6e7 227 Gene3D G3DSA:1.10.3480.10 9 222 1.2E-53 T 12-10-2018 Amet_1329 b814a5f06274f53ad1c7c719e255b6e7 227 SUPERFAMILY SSF89155 13 221 2.09E-48 T 12-10-2018 IPR036411 TorD-like superfamily Amet_1816 c53457cca6ef09325dce4661601f7e92 121 Gene3D G3DSA:2.40.50.660 40 121 4.9E-13 T 12-10-2018 Amet_1816 c53457cca6ef09325dce4661601f7e92 121 Pfam PF10694 Protein of unknown function (DUF2500) 13 118 5.1E-38 T 12-10-2018 IPR019635 Protein of unknown function DUF2500 Amet_3478 7a14117c7efc292bf009159cd2f042bf 574 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_3478 7a14117c7efc292bf009159cd2f042bf 574 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 32 2.3E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_3478 7a14117c7efc292bf009159cd2f042bf 574 SUPERFAMILY SSF54523 13 90 5.65E-6 T 12-10-2018 Amet_3478 7a14117c7efc292bf009159cd2f042bf 574 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 2.2E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_2204 60d53a1bce07bc8e4ba639dadc051958 203 Pfam PF02589 LUD domain 8 197 1.0E-41 T 12-10-2018 IPR003741 LUD domain Amet_2204 60d53a1bce07bc8e4ba639dadc051958 203 PIRSF PIRSF020269 1 203 7.2E-64 T 12-10-2018 IPR009501 Uncharacterised conserved protein UCP020269 Amet_0191 2de6783b9bab65e4d8762e93c91ac4ca 639 Pfam PF00395 S-layer homology domain 31 76 3.0E-10 T 12-10-2018 IPR001119 S-layer homology domain Amet_0191 2de6783b9bab65e4d8762e93c91ac4ca 639 Pfam PF00395 S-layer homology domain 182 213 1.9E-7 T 12-10-2018 IPR001119 S-layer homology domain Amet_1645 de06965469349626c7a838402a449803 291 SUPERFAMILY SSF81345 12 265 1.7E-43 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Amet_1645 de06965469349626c7a838402a449803 291 Pfam PF00950 ABC 3 transport family 14 270 1.1E-82 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Amet_1645 de06965469349626c7a838402a449803 291 Gene3D G3DSA:1.10.3470.10 16 274 2.6E-5 T 12-10-2018 IPR037294 ABC transporter, BtuC-like Amet_3432 19b8451d3707fcd7e7a7f9f13c759876 98 Gene3D G3DSA:3.30.70.100 9 90 1.7E-6 T 12-10-2018 Amet_3432 19b8451d3707fcd7e7a7f9f13c759876 98 SUPERFAMILY SSF55008 11 82 1.29E-9 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Amet_3470 42053a67784791757d78095463b848ec 255 SUPERFAMILY SSF100950 6 245 3.95E-68 T 12-10-2018 IPR037171 NagB/RpiA transferase-like Amet_3470 42053a67784791757d78095463b848ec 255 Gene3D G3DSA:3.40.50.1360 6 245 1.3E-75 T 12-10-2018 Amet_3470 42053a67784791757d78095463b848ec 255 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 234 1.4E-69 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Amet_3470 42053a67784791757d78095463b848ec 255 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 10 242 1.2E-65 T 12-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Amet_1140 c6b2eb12d73664a5aa1f97557884a6bc 91 Pfam PF02583 Metal-sensitive transcriptional repressor 8 84 6.8E-25 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Amet_1140 c6b2eb12d73664a5aa1f97557884a6bc 91 Gene3D G3DSA:1.20.58.1000 1 89 3.7E-27 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Amet_1285 82e7fec7e92bab29ad6d95cba8835615 515 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 44 503 5.6E-168 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_1285 82e7fec7e92bab29ad6d95cba8835615 515 PIRSF PIRSF005690 26 515 1.1E-163 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_3988 c5da614154f820e1aa00d276fe43c567 296 Pfam PF11185 Protein of unknown function (DUF2971) 145 235 7.7E-12 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 Amet_0298 bb485670d7c24bb513ac62eab98d3600 303 Pfam PF00395 S-layer homology domain 151 193 1.4E-9 T 12-10-2018 IPR001119 S-layer homology domain Amet_0298 bb485670d7c24bb513ac62eab98d3600 303 Pfam PF00395 S-layer homology domain 89 132 2.1E-11 T 12-10-2018 IPR001119 S-layer homology domain Amet_0298 bb485670d7c24bb513ac62eab98d3600 303 Pfam PF00395 S-layer homology domain 32 72 1.6E-13 T 12-10-2018 IPR001119 S-layer homology domain Amet_2583 5ee8cc24cfa8e47ae96696d650b930da 164 SUPERFAMILY SSF88659 91 142 2.8E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Amet_4230 eb997d9de8ffc6424bc74a513dd99eb7 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 416 1.9E-74 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4230 eb997d9de8ffc6424bc74a513dd99eb7 453 Pfam PF01554 MatE 247 409 1.3E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4230 eb997d9de8ffc6424bc74a513dd99eb7 453 Pfam PF01554 MatE 21 181 4.5E-34 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4230 eb997d9de8ffc6424bc74a513dd99eb7 453 PIRSF PIRSF006603 1 453 8.1E-77 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_0661 8cbd9b1b677bce86c4a26699248fe53a 462 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 455 3.6E-114 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 Amet_3480 05fc303da416e71f0d66f0c158a4874e 405 Gene3D G3DSA:1.20.81.30 57 173 5.3E-34 T 12-10-2018 Amet_3480 05fc303da416e71f0d66f0c158a4874e 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.0E-21 T 12-10-2018 IPR003004 GspF/PilC family Amet_3480 05fc303da416e71f0d66f0c158a4874e 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.0E-21 T 12-10-2018 IPR003004 GspF/PilC family Amet_3480 05fc303da416e71f0d66f0c158a4874e 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.0E-21 T 12-10-2018 IPR003004 GspF/PilC family Amet_3480 05fc303da416e71f0d66f0c158a4874e 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.0E-21 T 12-10-2018 IPR003004 GspF/PilC family Amet_3480 05fc303da416e71f0d66f0c158a4874e 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.3E-31 T 12-10-2018 IPR018076 Type II secretion system F domain Amet_3480 05fc303da416e71f0d66f0c158a4874e 405 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 9.6E-32 T 12-10-2018 IPR018076 Type II secretion system F domain Amet_3480 05fc303da416e71f0d66f0c158a4874e 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Amet_3480 05fc303da416e71f0d66f0c158a4874e 405 Gene3D G3DSA:1.20.81.30 257 369 1.6E-29 T 12-10-2018 Amet_0765 0aff7df101a512fa2a467c898748e014 259 Gene3D G3DSA:3.40.50.620 1 259 2.3E-84 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_0765 0aff7df101a512fa2a467c898748e014 259 SUPERFAMILY SSF52402 1 257 2.09E-68 T 12-10-2018 Amet_0765 0aff7df101a512fa2a467c898748e014 259 SMART SM00893 22 213 2.9E-51 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0765 0aff7df101a512fa2a467c898748e014 259 Pfam PF01012 Electron transfer flavoprotein domain 23 188 2.2E-40 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_0765 0aff7df101a512fa2a467c898748e014 259 PIRSF PIRSF000090 1 259 2.5E-77 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Amet_3887 97c0faadeaf07f79d2455d4e862d7f8c 421 Pfam PF07690 Major Facilitator Superfamily 20 241 1.1E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Amet_3887 97c0faadeaf07f79d2455d4e862d7f8c 421 Gene3D G3DSA:1.20.1250.20 2 412 2.0E-51 T 12-10-2018 Amet_3887 97c0faadeaf07f79d2455d4e862d7f8c 421 SUPERFAMILY SSF103473 7 407 6.8E-59 T 12-10-2018 IPR036259 MFS transporter superfamily Amet_1361 6503dfe25694c49d86aec33d4fb7f33b 117 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 2.4E-17 T 12-10-2018 IPR012452 Protein of unknown function DUF1657 Amet_0767 38755e57cd2f391048dc883e80710f1b 410 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 4 409 23.408 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Amet_0767 38755e57cd2f391048dc883e80710f1b 410 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 4 407 2.1E-100 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Amet_0767 38755e57cd2f391048dc883e80710f1b 410 Pfam PF03616 Sodium/glutamate symporter 4 377 2.6E-108 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 Amet_0211 2b11eea9296f85865309748e1f9d889c 369 Pfam PF04230 Polysaccharide pyruvyl transferase 19 303 1.9E-40 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase Amet_1435 6a3f72a1fceedb3b7acb2ed30fb64dfb 129 SUPERFAMILY SSF54593 2 128 5.91E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1435 6a3f72a1fceedb3b7acb2ed30fb64dfb 129 Gene3D G3DSA:3.10.180.10 1 129 1.4E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1435 6a3f72a1fceedb3b7acb2ed30fb64dfb 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 127 2.4E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amet_3850 a1f8af9c64d06ee2e49ab2d7de7a78e6 214 Pfam PF13468 Glyoxalase-like domain 5 177 6.8E-15 T 12-10-2018 IPR025870 Glyoxalase-like domain Amet_1734 64b97d57b9b5625e06c348cc349a7db7 297 SUPERFAMILY SSF161098 57 285 1.96E-61 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1734 64b97d57b9b5625e06c348cc349a7db7 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 293 4.4E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1734 64b97d57b9b5625e06c348cc349a7db7 297 Gene3D G3DSA:1.10.3720.10 54 295 1.1E-71 T 12-10-2018 IPR035906 MetI-like superfamily Amet_2484 59249ca6017c4e94367388c1f4ad887d 127 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 23 1.6E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_2484 59249ca6017c4e94367388c1f4ad887d 127 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 23 1.4E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site Amet_0181 cdc8d4b909db26881fd68d298fc3aca7 934 Pfam PF00395 S-layer homology domain 235 278 3.6E-7 T 12-10-2018 IPR001119 S-layer homology domain Amet_0181 cdc8d4b909db26881fd68d298fc3aca7 934 Pfam PF00395 S-layer homology domain 53 93 5.3E-10 T 12-10-2018 IPR001119 S-layer homology domain Amet_1659 6726d0964d82bf462fcbdfe660232de4 245 Gene3D G3DSA:3.40.109.10 1 244 2.0E-68 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_1659 6726d0964d82bf462fcbdfe660232de4 245 SUPERFAMILY SSF55469 58 244 1.96E-27 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_1659 6726d0964d82bf462fcbdfe660232de4 245 Pfam PF00881 Nitroreductase family 64 243 1.6E-24 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Amet_1659 6726d0964d82bf462fcbdfe660232de4 245 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 78 243 4.8E-43 T 12-10-2018 IPR020051 SagB-type dehydrogenase domain Amet_2301 f0f0e8ceddceff3ec2aecf5bf0c26c86 246 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 3 225 5.2E-62 T 12-10-2018 IPR018768 Domain of unknown function DUF2344 Amet_2301 f0f0e8ceddceff3ec2aecf5bf0c26c86 246 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 3 198 8.1E-59 T 12-10-2018 IPR018768 Domain of unknown function DUF2344 Amet_2270 20adea7056a8a63c7c90fa264f4e3063 66 Gene3D G3DSA:3.40.1440.10 4 66 4.3E-6 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Amet_0701 556e12c3d78fd9766bf14103fffea69b 248 Pfam PF04018 Domain of unknown function (DUF368) 14 224 1.8E-33 T 12-10-2018 IPR007163 Protein of unknown function DUF368 Amet_1995 43fe268f22ea5b51f969cbded44d6dee 734 Pfam PF08757 CotH kinase protein 311 627 2.8E-75 T 12-10-2018 IPR014867 Spore coat protein CotH Amet_1995 43fe268f22ea5b51f969cbded44d6dee 734 SUPERFAMILY SSF52058 59 192 1.11E-22 T 12-10-2018 Amet_1995 43fe268f22ea5b51f969cbded44d6dee 734 Gene3D G3DSA:3.80.10.10 24 239 1.9E-32 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily Amet_0614 0b3c55b85c00e6e6d7e38990f57b62cb 120 Pfam PF00072 Response regulator receiver domain 5 115 2.2E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0614 0b3c55b85c00e6e6d7e38990f57b62cb 120 Gene3D G3DSA:3.40.50.2300 2 120 4.4E-38 T 12-10-2018 Amet_0614 0b3c55b85c00e6e6d7e38990f57b62cb 120 SMART SM00448 3 115 1.2E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Amet_0614 0b3c55b85c00e6e6d7e38990f57b62cb 120 SUPERFAMILY SSF52172 4 120 1.99E-37 T 12-10-2018 IPR011006 CheY-like superfamily Amet_4777 099fd66eaef306a57ad29177c5d66cc6 386 Gene3D G3DSA:1.20.1530.20 2 384 3.5E-38 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily Amet_4777 099fd66eaef306a57ad29177c5d66cc6 386 Pfam PF00999 Sodium/hydrogen exchanger family 7 375 5.3E-27 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Amet_3332 65c6eec3c442e7253fa9cd734de8ba25 193 SUPERFAMILY SSF53323 6 190 8.11E-38 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_3332 65c6eec3c442e7253fa9cd734de8ba25 193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 189 5.5E-40 T 12-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Amet_3332 65c6eec3c442e7253fa9cd734de8ba25 193 Gene3D G3DSA:3.40.920.10 5 193 1.6E-50 T 12-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Amet_3325 f1e682abbd64fab4789ad2f20d6d1119 304 SUPERFAMILY SSF55166 135 289 1.91E-38 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_3325 f1e682abbd64fab4789ad2f20d6d1119 304 Gene3D G3DSA:3.30.1380.10 91 302 4.9E-78 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Amet_3325 f1e682abbd64fab4789ad2f20d6d1119 304 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 152 281 5.6E-45 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 Amet_4759 610922deebf895f6d28a68da1ca1c557 270 Pfam PF13485 Peptidase MA superfamily 100 265 8.8E-11 T 12-10-2018 IPR039568 Peptidase MA-like Amet_1625 201a3d48c81157311ab8f65fc08aeb97 66 Gene3D G3DSA:1.10.8.910 14 65 2.1E-6 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily Amet_1625 201a3d48c81157311ab8f65fc08aeb97 66 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 16 51 9.3E-8 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Amet_3741 21d95f5163dbbf9d33b0a903b72581ae 172 Pfam PF09413 Putative prokaryotic signal transducing protein 47 106 9.5E-7 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 Amet_3978 1ee780eeb9cf70d6af3332931e6f06be 259 Pfam PF14283 Domain of unknown function (DUF4366) 117 233 2.0E-19 T 12-10-2018 IPR025376 Domain of unknown function DUF4366 Amet_1432 2e9bd99b9c76e3007ccb8042b39da24e 144 Pfam PF06713 Bacterial PH domain 64 137 1.3E-27 T 12-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 Amet_3300 8eaff3fd3956ddb64cd844f79718d7c0 261 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 213 4.9E-45 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 Amet_3300 8eaff3fd3956ddb64cd844f79718d7c0 261 Gene3D G3DSA:3.90.1570.50 99 255 1.0E-34 T 12-10-2018 Amet_2494 814f339ccf20e6b0b3376fb7d458a467 67 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 63 1.2E-18 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family Amet_2494 814f339ccf20e6b0b3376fb7d458a467 67 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 3.6E-30 T 12-10-2018 IPR009570 Stage III sporulation protein AC Amet_3909 77c898cb3a7ea585c17ff4fc1cb0e5f6 162 Pfam PF12802 MarR family 32 95 4.9E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_3909 77c898cb3a7ea585c17ff4fc1cb0e5f6 162 SUPERFAMILY SSF46785 13 148 1.34E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_3909 77c898cb3a7ea585c17ff4fc1cb0e5f6 162 Gene3D G3DSA:1.10.10.10 9 151 1.3E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3909 77c898cb3a7ea585c17ff4fc1cb0e5f6 162 SMART SM00347 27 131 9.5E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_3909 77c898cb3a7ea585c17ff4fc1cb0e5f6 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 6.1E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_3909 77c898cb3a7ea585c17ff4fc1cb0e5f6 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 6.1E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_3909 77c898cb3a7ea585c17ff4fc1cb0e5f6 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 6.1E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Amet_4265 3d0e72f65b546489cfaa659ab27f24c8 248 Pfam PF02535 ZIP Zinc transporter 109 246 1.2E-24 T 12-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Amet_4345 ad830aa8b0d763cc119574d6006b8e56 395 Pfam PF04865 Baseplate J-like protein 75 298 7.2E-30 T 12-10-2018 IPR006949 Baseplate protein J-like Amet_1973 ad830aa8b0d763cc119574d6006b8e56 395 Pfam PF04865 Baseplate J-like protein 75 298 7.2E-30 T 12-10-2018 IPR006949 Baseplate protein J-like Amet_0436 ad830aa8b0d763cc119574d6006b8e56 395 Pfam PF04865 Baseplate J-like protein 75 298 7.2E-30 T 12-10-2018 IPR006949 Baseplate protein J-like Amet_3293 8949303a344fbd9daf008c51dfa7ad02 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 251 1.8E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_3293 8949303a344fbd9daf008c51dfa7ad02 269 Gene3D G3DSA:1.10.3720.10 5 261 7.7E-48 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3293 8949303a344fbd9daf008c51dfa7ad02 269 SUPERFAMILY SSF161098 3 259 8.97E-52 T 12-10-2018 IPR035906 MetI-like superfamily Amet_3369 bb8fb1fdad8a75b0f0db17329d70bfe0 118 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 20 110 9.8E-27 T 12-10-2018 IPR009241 Toxin HigB-like Amet_2990 abd5aadae04ca6d2fe9fbe80ac202e4d 372 SUPERFAMILY SSF102705 4 371 1.29E-130 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Amet_2990 abd5aadae04ca6d2fe9fbe80ac202e4d 372 Gene3D G3DSA:3.40.1390.30 2 119 1.2E-40 T 12-10-2018 Amet_2990 abd5aadae04ca6d2fe9fbe80ac202e4d 372 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 351 5.9E-85 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Amet_2990 abd5aadae04ca6d2fe9fbe80ac202e4d 372 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 368 6.0E-68 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Amet_2990 abd5aadae04ca6d2fe9fbe80ac202e4d 372 PIRSF PIRSF037489 1 372 8.6E-153 T 12-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria Amet_2990 abd5aadae04ca6d2fe9fbe80ac202e4d 372 Gene3D G3DSA:3.30.70.120 131 240 2.3E-42 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amet_4306 0909a929ff0d585da6ff2bfe905cf724 75 Gene3D G3DSA:3.30.70.3270 38 75 2.5E-5 T 12-10-2018 Amet_4306 0909a929ff0d585da6ff2bfe905cf724 75 Pfam PF12838 4Fe-4S dicluster domain 14 65 8.2E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Amet_4306 0909a929ff0d585da6ff2bfe905cf724 75 Gene3D G3DSA:3.30.70.20 1 37 3.3E-8 T 12-10-2018 Amet_4306 0909a929ff0d585da6ff2bfe905cf724 75 SUPERFAMILY SSF54862 4 71 9.95E-16 T 12-10-2018 Amet_4306 0909a929ff0d585da6ff2bfe905cf724 75 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Amet_3721 971eee3acdb5974243291d6529fb799e 320 Pfam PF03595 Voltage-dependent anion channel 14 288 6.2E-22 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Amet_3721 971eee3acdb5974243291d6529fb799e 320 Gene3D G3DSA:1.50.10.150 5 303 1.1E-35 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily Amet_4702 3002864695e95dfba608c7dda16a9dff 309 Gene3D G3DSA:3.90.1640.20 8 293 2.0E-79 T 12-10-2018 Amet_4702 3002864695e95dfba608c7dda16a9dff 309 Pfam PF14336 Domain of unknown function (DUF4392) 9 285 7.6E-92 T 12-10-2018 IPR025504 Domain of unknown function DUF4392 KEGG: 00471+4.2.1.48 Amet_0768 077b3d6dfa1a36a7a7d54210f1d32137 136 Pfam PF11026 Protein of unknown function (DUF2721) 6 122 1.7E-34 T 12-10-2018 IPR021279 Protein of unknown function DUF2721 Amet_3947 4432e7aa77f0ff4cb9430646a7f995c2 135 Pfam PF09862 Protein of unknown function (DUF2089) 9 131 2.5E-45 T 12-10-2018 IPR018658 Protein of unknown function DUF2089 Amet_1242 6aaaa642e46a5cb257dcd1158d2bd6c0 269 SUPERFAMILY SSF53850 3 265 7.53E-60 T 12-10-2018 Amet_1242 6aaaa642e46a5cb257dcd1158d2bd6c0 269 Gene3D G3DSA:3.40.190.10 109 226 1.5E-60 T 12-10-2018 Amet_1242 6aaaa642e46a5cb257dcd1158d2bd6c0 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 263 6.3E-57 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amet_1242 6aaaa642e46a5cb257dcd1158d2bd6c0 269 Gene3D G3DSA:3.40.190.10 43 262 1.5E-60 T 12-10-2018 Amet_1242 6aaaa642e46a5cb257dcd1158d2bd6c0 269 SMART SM00062 41 265 1.5E-63 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Amet_0501 a4a09797480505a792438f3790ff01e9 476 Pfam PF02447 GntP family permease 7 470 5.5E-81 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Amet_4320 df5d13760b44aa921118344103242efa 435 Pfam PF07613 Protein of unknown function (DUF1576) 53 227 1.9E-59 T 12-10-2018 IPR011470 Protein of unknown function DUF1576 Amet_4320 df5d13760b44aa921118344103242efa 435 Pfam PF07613 Protein of unknown function (DUF1576) 266 429 3.4E-57 T 12-10-2018 IPR011470 Protein of unknown function DUF1576 Amet_1017 ce7b2edf41e5e31e31abe9e117f63615 158 Pfam PF07670 Nucleoside recognition 15 104 1.1E-5 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Amet_2814 e335f04cdf0fa137a36fd2c005735cf0 353 Pfam PF13407 Periplasmic binding protein domain 49 307 2.3E-68 T 12-10-2018 IPR025997 Periplasmic binding protein Amet_2814 e335f04cdf0fa137a36fd2c005735cf0 353 Gene3D G3DSA:3.40.50.2300 151 339 3.6E-114 T 12-10-2018 Amet_2814 e335f04cdf0fa137a36fd2c005735cf0 353 Gene3D G3DSA:3.40.50.2300 50 327 3.6E-114 T 12-10-2018 Amet_2814 e335f04cdf0fa137a36fd2c005735cf0 353 SUPERFAMILY SSF53822 46 340 1.73E-73 T 12-10-2018 IPR028082 Periplasmic binding protein-like I Amet_3938 6ed13e60db55bccfd113ff58fe9b6f1d 181 Pfam PF12867 DinB superfamily 20 168 1.1E-16 T 12-10-2018 IPR024775 DinB-like domain Amet_3938 6ed13e60db55bccfd113ff58fe9b6f1d 181 SUPERFAMILY SSF109854 64 154 7.33E-5 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Amet_4618 4e839f70346799dde4b917979914a0b5 140 SUPERFAMILY SSF55729 11 114 5.11E-6 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_4618 4e839f70346799dde4b917979914a0b5 140 Gene3D G3DSA:3.40.630.30 2 123 6.2E-7 T 12-10-2018 Amet_0784 a7f11c25d38d7d7e392352425ec5f6ab 143 Pfam PF03646 FlaG protein 45 141 5.4E-27 T 12-10-2018 IPR005186 FlaG protein Amet_0784 a7f11c25d38d7d7e392352425ec5f6ab 143 Gene3D G3DSA:3.30.160.170 6 139 1.9E-24 T 12-10-2018 IPR035924 FlaG-like superfamily Amet_0784 a7f11c25d38d7d7e392352425ec5f6ab 143 SUPERFAMILY SSF160214 50 143 4.97E-26 T 12-10-2018 IPR035924 FlaG-like superfamily Amet_3748 4d6ce55deeab6d0ead1e6b8c83dc1768 341 PIRSF PIRSF000089 1 330 6.1E-104 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Amet_3748 4d6ce55deeab6d0ead1e6b8c83dc1768 341 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 205 288 1.4E-32 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Amet_3748 4d6ce55deeab6d0ead1e6b8c83dc1768 341 Gene3D G3DSA:3.40.50.620 2 200 5.5E-66 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Amet_3748 4d6ce55deeab6d0ead1e6b8c83dc1768 341 Gene3D G3DSA:3.40.50.1220 201 336 2.6E-52 T 12-10-2018 Amet_3748 4d6ce55deeab6d0ead1e6b8c83dc1768 341 SUPERFAMILY SSF52467 205 325 1.25E-43 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Amet_3748 4d6ce55deeab6d0ead1e6b8c83dc1768 341 Pfam PF01012 Electron transfer flavoprotein domain 4 185 1.9E-47 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_3748 4d6ce55deeab6d0ead1e6b8c83dc1768 341 SMART SM00893 4 191 9.5E-47 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Amet_3748 4d6ce55deeab6d0ead1e6b8c83dc1768 341 SUPERFAMILY SSF52402 4 194 1.53E-50 T 12-10-2018 Amet_1716 f950f05f7d9de7ce143cd2dea11adf06 378 SUPERFAMILY SSF101478 3 193 3.01E-7 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amet_1716 f950f05f7d9de7ce143cd2dea11adf06 378 Gene3D G3DSA:1.10.4080.10 1 241 4.3E-9 T 12-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Amet_4750 651ca7511942df149049dfe9b70aa6a7 55 TIGRFAM TIGR04129 CxxH_BA5709: CxxH/CxxC protein, BA_5709 family 2 54 3.2E-17 T 12-10-2018 IPR025626 YyzF-like protein Amet_4750 651ca7511942df149049dfe9b70aa6a7 55 Pfam PF14116 YyzF-like protein 4 55 3.5E-20 T 12-10-2018 IPR025626 YyzF-like protein Amet_3528 458dcfaa0f3276ca0c49cea317f44f4a 282 SUPERFAMILY SSF52540 147 254 2.26E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3528 458dcfaa0f3276ca0c49cea317f44f4a 282 Gene3D G3DSA:3.40.50.300 140 279 1.2E-6 T 12-10-2018 Amet_3105 f80452394927c09efd6b12c44ed1b7a5 360 SUPERFAMILY SSF52540 24 70 1.41E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3105 f80452394927c09efd6b12c44ed1b7a5 360 Gene3D G3DSA:3.40.50.300 221 360 4.0E-5 T 12-10-2018 Amet_3105 f80452394927c09efd6b12c44ed1b7a5 360 Gene3D G3DSA:3.40.50.300 21 203 8.6E-6 T 12-10-2018 Amet_3105 f80452394927c09efd6b12c44ed1b7a5 360 SUPERFAMILY SSF52540 219 350 5.94E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0776 5074deb4d48a76dd8181921a07c275b8 183 Pfam PF04892 VanZ like family 56 167 3.9E-12 T 12-10-2018 IPR006976 VanZ-like Amet_4156 a7357110f9d79ec4eb3730fff42521ce 79 Pfam PF13244 Domain of unknown function (DUF4040) 10 75 5.8E-22 T 12-10-2018 IPR025383 Domain of unknown function DUF4040 Amet_0245 7ae3c7e934239364fc563b8514a05a2d 92 Gene3D G3DSA:3.90.20.10 2 92 3.5E-7 T 12-10-2018 Amet_1576 3d66488bd98af973b37883d8d15d1f64 332 Pfam PF14027 Protein of unknown function (DUF4243) 23 310 9.7E-14 T 12-10-2018 IPR025337 Questin oxidase-like GO:0016491 Amet_0210 5aca20dfc784f74a814dcca7737a421e 423 Pfam PF04932 O-Antigen ligase 206 348 2.5E-10 T 12-10-2018 IPR007016 O-antigen ligase-related Amet_0307 d58d640c442d6a5fbfb2b404c1fbbfa1 139 Pfam PF04138 GtrA-like protein 11 127 1.0E-27 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Amet_2889 c039784420b9aa7eac3d3bff4ec99223 51 SUPERFAMILY SSF140500 2 43 2.75E-5 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 Amet_2889 c039784420b9aa7eac3d3bff4ec99223 51 Pfam PF09388 Spo0E like sporulation regulatory protein 2 42 3.9E-10 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 Amet_3486 11cd93665afd852e2d076f49f366fee1 226 Pfam PF13847 Methyltransferase domain 43 161 1.5E-18 T 12-10-2018 IPR025714 Methyltransferase domain Amet_3486 11cd93665afd852e2d076f49f366fee1 226 SUPERFAMILY SSF53335 4 203 1.51E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_3486 11cd93665afd852e2d076f49f366fee1 226 Gene3D G3DSA:3.40.50.150 7 178 9.3E-29 T 12-10-2018 Amet_0540 1d19802bd636e71500871a0b33ffc399 317 Gene3D G3DSA:3.40.50.1100 49 146 3.8E-101 T 12-10-2018 Amet_0540 1d19802bd636e71500871a0b33ffc399 317 SUPERFAMILY SSF53686 4 313 4.85E-82 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_0540 1d19802bd636e71500871a0b33ffc399 317 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 303 1.1E-72 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_0540 1d19802bd636e71500871a0b33ffc399 317 Gene3D G3DSA:3.40.50.1100 7 307 3.8E-101 T 12-10-2018 Amet_4484 0e74443a8cfafc7afe8829a4461bd7b8 80 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 78 4.7E-13 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Amet_4484 0e74443a8cfafc7afe8829a4461bd7b8 80 Gene3D G3DSA:3.30.1330.30 3 79 1.4E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Amet_4484 0e74443a8cfafc7afe8829a4461bd7b8 80 SUPERFAMILY SSF55315 7 78 3.6E-18 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Amet_3688 c15589c343c589ca499f270b8c93b6ab 62 Pfam PF04070 Domain of unknown function (DUF378) 2 59 2.3E-23 T 12-10-2018 IPR007211 Protein of unknown function DUF378 Amet_4440 e5ab5fe845d6ec64b9a8100077da9ac8 236 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 45 229 1.0E-49 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_4440 e5ab5fe845d6ec64b9a8100077da9ac8 236 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 45 231 2.0E-70 T 12-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 Amet_4440 e5ab5fe845d6ec64b9a8100077da9ac8 236 Gene3D G3DSA:3.40.630.40 41 236 6.6E-58 T 12-10-2018 Amet_4440 e5ab5fe845d6ec64b9a8100077da9ac8 236 SMART SM00646 117 229 5.7E-25 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Amet_4440 e5ab5fe845d6ec64b9a8100077da9ac8 236 SUPERFAMILY SSF53187 45 233 2.7E-52 T 12-10-2018 Amet_3015 a15252315ca7a33c86dc5dccc20081d2 90 Pfam PF02583 Metal-sensitive transcriptional repressor 9 87 9.4E-27 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Amet_3015 a15252315ca7a33c86dc5dccc20081d2 90 Gene3D G3DSA:1.20.58.1000 1 90 3.2E-29 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Amet_3121 c8bdaace0bdf183f79f3a13f98a07a40 171 Gene3D G3DSA:1.10.10.10 1 64 1.6E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Amet_3121 c8bdaace0bdf183f79f3a13f98a07a40 171 SUPERFAMILY SSF46785 5 67 5.46E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 SUPERFAMILY SSF69360 196 322 1.51E-8 T 12-10-2018 Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 SUPERFAMILY SSF69360 57 144 2.16E-10 T 12-10-2018 Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 SUPERFAMILY SSF69360 339 491 8.44E-14 T 12-10-2018 Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 306 343 1.5E-7 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 133 167 6.1E-5 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 447 481 1.6E-13 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 379 413 2.8E-8 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 200 228 4.5E-10 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 65 96 1.9E-8 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 413 447 2.8E-8 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 99 130 5.5E-11 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 238 272 1.1E-11 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 167 199 1.8E-7 T 12-10-2018 IPR032774 WG containing repeat Amet_1855 15a553ea3abd9501d0c9e74fe73da058 492 Pfam PF14903 WG containing repeat 343 377 4.7E-4 T 12-10-2018 IPR032774 WG containing repeat Amet_4711 e56a9ab2ab152b9fb469d101035f5645 232 Pfam PF04143 Sulphur transport 64 222 1.1E-30 T 12-10-2018 IPR007272 Sulphur transport domain Amet_0705 4d455b07b3760693064c7a384c713ed6 131 Pfam PF06949 Protein of unknown function (DUF1292) 53 125 1.4E-15 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 Amet_2674 2293c2c372914402c72192a53367f666 103 SUPERFAMILY SSF55315 2 100 1.02E-23 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Amet_2674 2293c2c372914402c72192a53367f666 103 Gene3D G3DSA:3.30.1330.30 1 100 4.6E-33 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like Amet_2674 2293c2c372914402c72192a53367f666 103 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 92 8.5E-13 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Amet_4112 98b1cc2ac9e88cab94cf776f0dc02a9b 347 Gene3D G3DSA:3.40.50.1100 51 153 1.5E-95 T 12-10-2018 Amet_4112 98b1cc2ac9e88cab94cf776f0dc02a9b 347 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 14 304 1.7E-62 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Amet_4112 98b1cc2ac9e88cab94cf776f0dc02a9b 347 SUPERFAMILY SSF53686 11 316 1.96E-83 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Amet_4112 98b1cc2ac9e88cab94cf776f0dc02a9b 347 Gene3D G3DSA:3.40.50.1100 16 311 1.5E-95 T 12-10-2018 Amet_2712 d243bf70283749ee561c0f202c076ca2 138 Pfam PF03748 Flagellar basal body-associated protein FliL 45 138 7.4E-16 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Amet_0096 ad0fd59679fd1b1f714be3bbf4bc4155 178 Pfam PF07670 Nucleoside recognition 46 145 1.7E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Amet_1106 23c4c7005a40a7117ec4adf091163446 188 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 57 179 3.5E-12 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 Amet_2217 b9e7b2ba8c78693e31d66c94570f27eb 136 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 5 133 3.0E-65 T 12-10-2018 IPR020144 Stage V sporulation protein AB Amet_2217 b9e7b2ba8c78693e31d66c94570f27eb 136 Pfam PF13782 Stage V sporulation protein AB 25 133 3.9E-33 T 12-10-2018 IPR020144 Stage V sporulation protein AB Amet_2169 62bd294512dc7a3982f880e019ef3814 199 Gene3D G3DSA:2.40.50.140 115 196 4.3E-5 T 12-10-2018 Amet_3069 00e8d143e5ef95f3e227b21b23c5996b 261 Pfam PF01061 ABC-2 type transporter 13 222 3.5E-21 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Amet_3069 00e8d143e5ef95f3e227b21b23c5996b 261 PIRSF PIRSF006648 2 257 5.2E-23 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_3069 00e8d143e5ef95f3e227b21b23c5996b 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 180 199 5.1E-8 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_3069 00e8d143e5ef95f3e227b21b23c5996b 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 62 84 5.1E-8 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_3069 00e8d143e5ef95f3e227b21b23c5996b 261 PRINTS PR00164 ABC-2 type transport system membrane protein signature 143 167 5.1E-8 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Amet_2469 fdbebc13ffa42603b5f069ebd513864c 197 Pfam PF03956 Lysine exporter LysO 7 195 6.4E-59 T 12-10-2018 IPR005642 Lysine exporter LysO Amet_2469 fdbebc13ffa42603b5f069ebd513864c 197 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 41 180 9.0E-35 T 12-10-2018 IPR005642 Lysine exporter LysO Amet_0563 780d8778ee5ac3f1e03c8cdd55d177f0 241 PRINTS PR01837 MgtC/SapB protein signature 33 51 1.3E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_0563 780d8778ee5ac3f1e03c8cdd55d177f0 241 PRINTS PR01837 MgtC/SapB protein signature 93 117 1.3E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_0563 780d8778ee5ac3f1e03c8cdd55d177f0 241 PRINTS PR01837 MgtC/SapB protein signature 66 88 1.3E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_0563 780d8778ee5ac3f1e03c8cdd55d177f0 241 PRINTS PR01837 MgtC/SapB protein signature 14 33 1.3E-43 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_0563 780d8778ee5ac3f1e03c8cdd55d177f0 241 SUPERFAMILY SSF55021 146 226 3.03E-5 T 12-10-2018 Amet_0563 780d8778ee5ac3f1e03c8cdd55d177f0 241 Pfam PF02308 MgtC family 11 139 6.3E-37 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Amet_2525 cf650cd275a8fd105a0e055c794f9a99 273 Pfam PF01048 Phosphorylase superfamily 25 270 2.3E-54 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Amet_2525 cf650cd275a8fd105a0e055c794f9a99 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 271 5.9E-108 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Amet_2525 cf650cd275a8fd105a0e055c794f9a99 273 SUPERFAMILY SSF53167 3 273 1.1E-96 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Amet_2525 cf650cd275a8fd105a0e055c794f9a99 273 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 271 1.7E-109 T 12-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Amet_2525 cf650cd275a8fd105a0e055c794f9a99 273 PIRSF PIRSF000477 1 273 8.3E-114 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Amet_2525 cf650cd275a8fd105a0e055c794f9a99 273 Gene3D G3DSA:3.40.50.1580 1 272 5.2E-113 T 12-10-2018 Amet_0667 c3d7f82dee2b88a4570034a86bd6a784 151 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 26 150 5.0E-16 T 12-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 Amet_4043 7deb7218ba278f4398abe8ea1d40bdff 212 Gene3D G3DSA:3.40.960.10 107 208 1.1E-15 T 12-10-2018 Amet_4043 7deb7218ba278f4398abe8ea1d40bdff 212 SUPERFAMILY SSF52980 107 204 1.34E-9 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Amet_4043 7deb7218ba278f4398abe8ea1d40bdff 212 Pfam PF04480 Protein of unknown function (DUF559) 124 204 3.3E-7 T 12-10-2018 IPR007569 Protein of unknown function DUF559 Amet_0237 031df5b2dfdb49e4b2e5f1b338685067 234 SUPERFAMILY SSF52540 93 175 5.6E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0237 031df5b2dfdb49e4b2e5f1b338685067 234 Gene3D G3DSA:3.40.50.300 8 195 7.0E-8 T 12-10-2018 Amet_0237 031df5b2dfdb49e4b2e5f1b338685067 234 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 37 156 9.7E-14 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Amet_2862 8d4d1d7d3cb16cad61d41b198df79c27 305 Pfam PF14045 YIEGIA protein 8 296 3.8E-122 T 12-10-2018 IPR025918 YIEGIA protein Amet_2862 8d4d1d7d3cb16cad61d41b198df79c27 305 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 1 301 3.0E-145 T 12-10-2018 Amet_3918 77a9e80b01449d0f879c8d3863c60593 101 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 15 91 4.8E-25 T 12-10-2018 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase Amet_3918 77a9e80b01449d0f879c8d3863c60593 101 Gene3D G3DSA:2.60.40.2240 1 98 3.7E-28 T 12-10-2018 Amet_4205 f826ea4782912d00445e6d47b6b4154e 392 Gene3D G3DSA:3.40.1710.10 46 192 2.2E-6 T 12-10-2018 Amet_4205 f826ea4782912d00445e6d47b6b4154e 392 Pfam PF12698 ABC-2 family transporter protein 23 384 2.1E-30 T 12-10-2018 Amet_0512 304e3a04c5c73740a3d4064a33558931 371 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 3 369 3.6E-71 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_0512 304e3a04c5c73740a3d4064a33558931 371 Gene3D G3DSA:3.30.300.210 217 370 1.4E-25 T 12-10-2018 IPR038501 Spore germination GerAC superfamily Amet_0512 304e3a04c5c73740a3d4064a33558931 371 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 203 368 1.1E-27 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Amet_4307 3a3a2c23e0b0e1ec665159bc8ed3a617 223 SUPERFAMILY SSF52540 3 199 5.53E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4307 3a3a2c23e0b0e1ec665159bc8ed3a617 223 Gene3D G3DSA:3.40.50.300 9 202 5.9E-9 T 12-10-2018 Amet_4307 3a3a2c23e0b0e1ec665159bc8ed3a617 223 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 15 174 2.8E-7 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Amet_4249 671b027068d4b3f2b4c7d4bb0b93de73 435 Pfam PF13786 Domain of unknown function (DUF4179) 40 128 1.8E-11 T 12-10-2018 IPR025436 Domain of unknown function DUF4179 Amet_1735 2c9847295246e51630ff9255880d456e 273 SUPERFAMILY SSF161098 2 273 1.87E-71 T 12-10-2018 IPR035906 MetI-like superfamily Amet_1735 2c9847295246e51630ff9255880d456e 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 267 5.2E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Amet_1735 2c9847295246e51630ff9255880d456e 273 Gene3D G3DSA:1.10.3720.10 1 264 8.6E-67 T 12-10-2018 IPR035906 MetI-like superfamily Amet_0948 3132aa92d7900b4f5e99d3fa11997ef0 215 SUPERFAMILY SSF53335 39 146 1.41E-7 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_0948 3132aa92d7900b4f5e99d3fa11997ef0 215 Gene3D G3DSA:3.40.50.150 20 188 1.3E-35 T 12-10-2018 Amet_1301 3cf039a361451176e2d8ade442200e11 434 SUPERFAMILY SSF51445 54 430 3.05E-104 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily Amet_1301 3cf039a361451176e2d8ade442200e11 434 Gene3D G3DSA:3.20.20.300 53 416 2.8E-133 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Amet_1301 3cf039a361451176e2d8ade442200e11 434 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 67 396 1.0E-99 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Amet_2412 60708cf28b735322886ddbb2aece71f4 413 Pfam PF04860 Phage portal protein 40 370 3.7E-56 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein Amet_0495 98ec65257c412b0f2f8ff40f3518ad79 369 Pfam PF17231 Family of unknown function (DUF5305) 124 341 2.5E-53 T 12-10-2018 IPR035185 Protein of unknown function DUF5305 Amet_1147 bdd35cdd1ef34d2004121889f3d861ea 128 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 116 1.1E-17 T 12-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein Amet_0377 beb2161378521e7c01c20a183fd2262b 82 SUPERFAMILY SSF143120 2 68 3.79E-13 T 12-10-2018 IPR036165 YefM-like superfamily Amet_0377 beb2161378521e7c01c20a183fd2262b 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 54 8.8E-8 T 12-10-2018 Amet_0377 beb2161378521e7c01c20a183fd2262b 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 61 1.9E-8 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Amet_1924 e69a051d4d608dc4d2ffce4c83b0891a 156 Pfam PF09299 Mu transposase, C-terminal 17 70 1.5E-4 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal Amet_0386 e69a051d4d608dc4d2ffce4c83b0891a 156 Pfam PF09299 Mu transposase, C-terminal 17 70 1.5E-4 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal Amet_4396 e69a051d4d608dc4d2ffce4c83b0891a 156 Pfam PF09299 Mu transposase, C-terminal 17 70 1.5E-4 T 12-10-2018 IPR015378 Transposase-like, Mu, C-terminal Amet_4012 bed50ebffdcbeec724f571df4d13a170 378 Pfam PF10926 Protein of unknown function (DUF2800) 4 360 1.5E-151 T 12-10-2018 IPR021229 Protein of unknown function DUF2800 Amet_2602 291db8f9bafa2113daeeffd64b2184a5 262 Pfam PF07261 Replication initiation and membrane attachment 151 219 1.1E-11 T 12-10-2018 IPR006343 DnaD domain Amet_2602 291db8f9bafa2113daeeffd64b2184a5 262 Gene3D G3DSA:1.10.10.630 140 218 3.6E-8 T 12-10-2018 IPR034829 DnaD-like domain superfamily Amet_2602 291db8f9bafa2113daeeffd64b2184a5 262 Pfam PF13730 Helix-turn-helix domain 23 78 1.2E-5 T 12-10-2018 Amet_2602 291db8f9bafa2113daeeffd64b2184a5 262 SUPERFAMILY SSF158499 147 212 3.14E-8 T 12-10-2018 IPR034829 DnaD-like domain superfamily Amet_2602 291db8f9bafa2113daeeffd64b2184a5 262 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 144 216 4.4E-10 T 12-10-2018 IPR006343 DnaD domain Amet_3188 e5fbc98fff234c34bcfe65da2c031c6d 209 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 188 2.5E-58 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Amet_3188 e5fbc98fff234c34bcfe65da2c031c6d 209 PIRSF PIRSF006102 1 205 5.6E-63 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Amet_3703 78fbf7e79d09d20b8158b97e58f7e665 375 Pfam PF12671 Putative amidase domain 211 370 9.1E-43 T 12-10-2018 IPR024301 Putative amidase domain Amet_4365 041c3670751c3b7dbc401b4ee13649e6 449 Pfam PF06381 Protein of unknown function (DUF1073) 54 398 2.5E-85 T 12-10-2018 IPR024459 Protein of unknown function DUF1073 Amet_4365 041c3670751c3b7dbc401b4ee13649e6 449 TIGRFAM TIGR01555 phge_rel_HI1409: phage-associated protein, HI1409 family 31 420 1.8E-72 T 12-10-2018 IPR006445 Phage-associated protein HI1409 Amet_1777 0379eb568a4e5caae06d265d3217d94b 101 Pfam PF05717 IS66 Orf2 like protein 9 90 2.4E-34 T 12-10-2018 IPR008878 Transposase IS66, Orf2 Amet_1887 2401941d801302bb2eb5fd9b0aa6af4c 550 SUPERFAMILY SSF52096 138 541 2.49E-25 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Amet_1887 2401941d801302bb2eb5fd9b0aa6af4c 550 Pfam PF03572 Peptidase family S41 326 531 1.9E-14 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Amet_3944 d9df775cf1942f25743b0b13b0733573 114 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 6 104 1.8E-21 T 12-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Amet_3016 a5925d229e0f9e3064857f7991d34fd3 435 Pfam PF01554 MatE 6 166 5.9E-38 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3016 a5925d229e0f9e3064857f7991d34fd3 435 Pfam PF01554 MatE 232 393 3.5E-34 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3016 a5925d229e0f9e3064857f7991d34fd3 435 TIGRFAM TIGR00797 matE: MATE efflux family protein 6 406 7.3E-91 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_3016 a5925d229e0f9e3064857f7991d34fd3 435 PIRSF PIRSF006603 1 435 1.7E-112 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_0696 7531bf47e8606a1dab55c5a77068d56a 486 PIRSF PIRSF002457 10 486 1.7E-109 T 12-10-2018 IPR030676 Citrate carrier CitT-related Amet_0696 7531bf47e8606a1dab55c5a77068d56a 486 Pfam PF00939 Sodium:sulfate symporter transmembrane region 24 474 3.4E-78 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Amet_0696 7531bf47e8606a1dab55c5a77068d56a 486 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 46 474 5.8E-92 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Amet_4314 838ce1357972514b193bf1cd2f58063c 236 Pfam PF04972 BON domain 185 234 6.2E-14 T 12-10-2018 IPR007055 BON domain Amet_4314 838ce1357972514b193bf1cd2f58063c 236 Pfam PF04972 BON domain 29 88 1.1E-8 T 12-10-2018 IPR007055 BON domain Amet_4314 838ce1357972514b193bf1cd2f58063c 236 Pfam PF04972 BON domain 108 161 2.3E-9 T 12-10-2018 IPR007055 BON domain Amet_4188 5848b97a7b1525a338a79e6923144769 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 97 1.9E-15 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Amet_4188 5848b97a7b1525a338a79e6923144769 105 Gene3D G3DSA:3.40.50.2300 2 105 4.0E-28 T 12-10-2018 Amet_4188 5848b97a7b1525a338a79e6923144769 105 SUPERFAMILY SSF52794 1 103 6.54E-26 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Amet_0580 5771a1cf58748cf0fc8aebef109e8b50 499 Pfam PF00209 Sodium:neurotransmitter symporter family 6 119 3.6E-24 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0580 5771a1cf58748cf0fc8aebef109e8b50 499 Pfam PF00209 Sodium:neurotransmitter symporter family 151 471 9.2E-38 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0580 5771a1cf58748cf0fc8aebef109e8b50 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 1.1E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0580 5771a1cf58748cf0fc8aebef109e8b50 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.1E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0580 5771a1cf58748cf0fc8aebef109e8b50 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 1.1E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0580 5771a1cf58748cf0fc8aebef109e8b50 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 1.1E-14 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Amet_0580 5771a1cf58748cf0fc8aebef109e8b50 499 SUPERFAMILY SSF161070 6 478 2.75E-111 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Amet_1983 3f8c75a9a193cfac587e7f07e625eddf 185 Gene3D G3DSA:3.40.50.360 1 185 5.2E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1983 3f8c75a9a193cfac587e7f07e625eddf 185 SUPERFAMILY SSF52218 3 178 9.32E-43 T 12-10-2018 IPR029039 Flavoprotein-like superfamily Amet_1983 3f8c75a9a193cfac587e7f07e625eddf 185 Pfam PF03358 NADPH-dependent FMN reductase 2 144 2.8E-41 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Amet_2209 3aecc6567c80720315f9460c4372319d 115 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 3 106 5.5E-30 T 12-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Amet_0595 8bc71743572c116ecdcd78c34bb301b8 93 SUPERFAMILY SSF143120 2 69 3.01E-13 T 12-10-2018 IPR036165 YefM-like superfamily Amet_0595 8bc71743572c116ecdcd78c34bb301b8 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 69 9.5E-9 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Amet_0595 8bc71743572c116ecdcd78c34bb301b8 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 16 56 2.4E-5 T 12-10-2018 Amet_4322 ccaa90a5e18804392b2525deadc777ce 121 Pfam PF07784 Protein of unknown function (DUF1622) 38 101 8.6E-18 T 12-10-2018 IPR012427 Protein of unknown function DUF1622 Amet_0466 aff5db68bc7e72fed969ed6f4e02acc1 138 Pfam PF05598 Transposase domain (DUF772) 59 122 1.6E-10 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_3240 cd1af3f06304e5983ca96076f98d39ba 181 Gene3D G3DSA:1.10.1760.20 1 180 8.6E-53 T 12-10-2018 Amet_3240 cd1af3f06304e5983ca96076f98d39ba 181 PIRSF PIRSF016661 1 181 1.5E-41 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Amet_3240 cd1af3f06304e5983ca96076f98d39ba 181 Pfam PF02632 BioY family 31 172 1.5E-37 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Amet_4006 c0cbe9e0deb4f2ce7f97fdde5de81006 138 Gene3D G3DSA:1.10.10.2600 1 90 5.1E-10 T 12-10-2018 IPR038109 DNA-binding recombinase domain superfamily Amet_4419 3e65735aa45ea91e1ee171e6b3f8a0de 210 SUPERFAMILY SSF102198 3 205 3.27E-52 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amet_4419 3e65735aa45ea91e1ee171e6b3f8a0de 210 Pfam PF04199 Putative cyclase 5 150 4.4E-26 T 12-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amet_4419 3e65735aa45ea91e1ee171e6b3f8a0de 210 Gene3D G3DSA:3.50.30.50 1 205 4.3E-51 T 12-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Amet_2230 75a64198e3bb10b383dfb2b380d36206 130 Gene3D G3DSA:3.40.50.720 2 129 7.1E-41 T 12-10-2018 Amet_2230 75a64198e3bb10b383dfb2b380d36206 130 Pfam PF13380 CoA binding domain 15 128 8.6E-35 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Amet_2230 75a64198e3bb10b383dfb2b380d36206 130 SMART SM00881 11 103 9.3E-21 T 12-10-2018 IPR003781 CoA-binding GO:0048037 Amet_2230 75a64198e3bb10b383dfb2b380d36206 130 SUPERFAMILY SSF51735 7 128 1.4E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily Amet_1442 81abdeb3c65569c7325817dc6da803d5 239 Pfam PF01553 Acyltransferase 36 160 2.3E-21 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amet_1442 81abdeb3c65569c7325817dc6da803d5 239 SUPERFAMILY SSF69593 17 234 7.59E-43 T 12-10-2018 Amet_1442 81abdeb3c65569c7325817dc6da803d5 239 SMART SM00563 51 164 2.0E-24 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Amet_3254 88ebe16b46838870436ce668c05a3626 281 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 4 233 7.6E-59 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amet_3254 88ebe16b46838870436ce668c05a3626 281 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 243 7.8E-46 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amet_3254 88ebe16b46838870436ce668c05a3626 281 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 239 13.795 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Amet_4041 e4025fa4dab26cbe89f64c622f8d05f7 183 Pfam PF05119 Phage terminase, small subunit 73 147 1.5E-6 T 12-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family Amet_2998 f5450e559e3f1655739430094b58ac3d 233 Pfam PF03591 AzlC protein 13 152 8.1E-36 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease Amet_0719 43b7187a0f7751177d3039a0aa7082c2 73 Pfam PF07872 Protein of unknown function (DUF1659) 9 48 3.5E-10 T 12-10-2018 IPR012454 Protein of unknown function DUF1659 Amet_0170 2b708ed85e6d9d5750239c6cfe776c1c 169 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 13 90 8.1E-22 T 12-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like Amet_0170 2b708ed85e6d9d5750239c6cfe776c1c 169 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 5 115 1.4E-24 T 12-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ Amet_3075 09c866893047dd94abda2511f4855b96 449 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 1 437 3.4E-139 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_3075 09c866893047dd94abda2511f4855b96 449 PIRSF PIRSF005690 2 444 8.2E-141 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Amet_0599 843a74214d85400a2f5d04792657bde4 785 Pfam PF02687 FtsX-like permease family 685 775 2.5E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_0599 843a74214d85400a2f5d04792657bde4 785 Pfam PF02687 FtsX-like permease family 298 388 3.2E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_4402 e58d96d60bb877de19c8fb98612ce6b3 237 Gene3D G3DSA:1.10.3910.10 1 65 6.3E-5 T 12-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Amet_4402 e58d96d60bb877de19c8fb98612ce6b3 237 Pfam PF01814 Hemerythrin HHE cation binding domain 84 232 5.3E-25 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Amet_4402 e58d96d60bb877de19c8fb98612ce6b3 237 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 11 231 7.5E-78 T 12-10-2018 IPR019903 Repair of iron centres family Amet_4402 e58d96d60bb877de19c8fb98612ce6b3 237 Pfam PF04405 Domain of Unknown function (DUF542) 8 61 5.7E-22 T 12-10-2018 IPR019903 Repair of iron centres family Amet_4402 e58d96d60bb877de19c8fb98612ce6b3 237 Gene3D G3DSA:1.20.120.520 71 237 6.5E-23 T 12-10-2018 Amet_1603 3805f596033050100968a9ef7d1b9c8d 149 Pfam PF13655 N-terminal domain of reverse transcriptase 24 102 2.4E-31 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain Amet_3884 5c37b5955f2fee487f80f88aaa0f0542 41 Gene3D G3DSA:3.30.70.1290 2 40 1.6E-6 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3884 5c37b5955f2fee487f80f88aaa0f0542 41 SUPERFAMILY SSF143422 3 32 2.62E-6 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_0246 3a416343f8f96f8a55204a0b0cd5dd12 422 Pfam PF13546 DDE superfamily endonuclease 69 220 7.3E-13 T 12-10-2018 IPR038721 Transposase IS701-like, DDE domain Amet_0246 3a416343f8f96f8a55204a0b0cd5dd12 422 SUPERFAMILY SSF53098 64 379 3.87E-11 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_2299 edfecf3eaa227e4aa74617890297f6e9 305 Pfam PF02163 Peptidase family M50 114 173 1.4E-7 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Amet_1772 4fe0b78dcf08e1367a30819bc1c7e29c 129 SUPERFAMILY SSF160214 39 129 2.75E-25 T 12-10-2018 IPR035924 FlaG-like superfamily Amet_1772 4fe0b78dcf08e1367a30819bc1c7e29c 129 Pfam PF03646 FlaG protein 30 127 1.8E-27 T 12-10-2018 IPR005186 FlaG protein Amet_1772 4fe0b78dcf08e1367a30819bc1c7e29c 129 Gene3D G3DSA:3.30.160.170 4 125 4.6E-27 T 12-10-2018 IPR035924 FlaG-like superfamily Amet_1215 99f626517dbae947f1eb679667519aff 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 4 96 7.3E-18 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Amet_2424 86d4ee6cf7c5705d04a275c5c0f770c1 307 SMART SM00507 230 284 0.0051 T 12-10-2018 IPR003615 HNH nuclease Amet_2132 522eea4acda93db6f082c2589d1e8918 401 Pfam PF01548 Transposase 11 155 2.8E-25 T 12-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Amet_2132 522eea4acda93db6f082c2589d1e8918 401 Pfam PF02371 Transposase IS116/IS110/IS902 family 247 330 2.8E-15 T 12-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Amet_3953 ff56e7a9a04f3af7031779f87c7d84d7 640 Pfam PF02687 FtsX-like permease family 86 179 1.3E-5 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_3953 ff56e7a9a04f3af7031779f87c7d84d7 640 PIRSF PIRSF018968 1 640 1.2E-105 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 Amet_2334 029a9cd7c66e326b98201201d482452d 66 Pfam PF04070 Domain of unknown function (DUF378) 2 58 1.6E-27 T 12-10-2018 IPR007211 Protein of unknown function DUF378 Amet_4292 deb8ef85ec25f8601068dc543cee1622 144 Pfam PF13655 N-terminal domain of reverse transcriptase 20 98 4.0E-30 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain Amet_1409 deb8ef85ec25f8601068dc543cee1622 144 Pfam PF13655 N-terminal domain of reverse transcriptase 20 98 4.0E-30 T 12-10-2018 IPR025960 Reverse transcriptase, N-terminal domain Amet_1325 36d2a17f5ad79330a3cf527de88319f3 660 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 178 190 7.6E-8 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD Amet_1325 36d2a17f5ad79330a3cf527de88319f3 660 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 98 112 7.6E-8 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD Amet_1325 36d2a17f5ad79330a3cf527de88319f3 660 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 246 260 7.6E-8 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD Amet_1325 36d2a17f5ad79330a3cf527de88319f3 660 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 161 175 7.6E-8 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD Amet_0368 a4a63c6bdd8857e8f8254faed55cf2b1 449 Pfam PF02687 FtsX-like permease family 345 440 2.0E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_0368 a4a63c6bdd8857e8f8254faed55cf2b1 449 Pfam PF12704 MacB-like periplasmic core domain 21 242 1.1E-14 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Amet_4778 94045818b1fc448f89f97b9f1c7eafee 117 SUPERFAMILY SSF54913 4 108 1.21E-11 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amet_0040 f09c52cfaae2272f04e79dd20e6acd71 474 Pfam PF03606 C4-dicarboxylate anaerobic carrier 16 466 2.1E-105 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 Amet_2478 5b2cbeedc26361f9c5372af2732f9730 70 SUPERFAMILY SSF47413 9 61 1.46E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_2478 5b2cbeedc26361f9c5372af2732f9730 70 Gene3D G3DSA:1.10.260.40 3 60 2.6E-6 T 12-10-2018 Amet_0303 ce81e95df7bb1dda54724dfa73aa3cfd 476 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 129 286 3.1E-14 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Amet_3523 20e89099f4b10444d50f5c5e4aa1f764 108 PRINTS PR00340 P-II protein signature 82 102 1.7E-19 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3523 20e89099f4b10444d50f5c5e4aa1f764 108 PRINTS PR00340 P-II protein signature 23 41 1.7E-19 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3523 20e89099f4b10444d50f5c5e4aa1f764 108 PRINTS PR00340 P-II protein signature 2 17 1.7E-19 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3523 20e89099f4b10444d50f5c5e4aa1f764 108 SMART SM00938 4 104 9.5E-39 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3523 20e89099f4b10444d50f5c5e4aa1f764 108 Gene3D G3DSA:3.30.70.120 1 108 8.5E-29 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Amet_3523 20e89099f4b10444d50f5c5e4aa1f764 108 SUPERFAMILY SSF54913 1 106 1.68E-28 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Amet_3523 20e89099f4b10444d50f5c5e4aa1f764 108 Pfam PF00543 Nitrogen regulatory protein P-II 4 104 1.2E-25 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Amet_3506 e7f7f89c0d3b79bd8d98e456f7a5e36f 307 SUPERFAMILY SSF48239 42 301 1.06E-10 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Amet_4153 d93dc584e5bb3191954c75f9975cd2ae 127 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 15 117 1.7E-25 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Amet_4089 652390e7b136afec7c3f6b743b79ef00 53 Pfam PF07561 Domain of Unknown Function (DUF1540) 9 50 4.0E-12 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 Amet_2714 32041f9acdd01cff2316aca1cbe52c23 262 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Amet_2714 32041f9acdd01cff2316aca1cbe52c23 262 Pfam PF01618 MotA/TolQ/ExbB proton channel family 100 217 4.4E-25 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Amet_1004 8f804c43965aeafb7e01c50f78575aa2 769 SUPERFAMILY SSF52540 191 753 8.77E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_1004 8f804c43965aeafb7e01c50f78575aa2 769 Pfam PF13538 UvrD-like helicase C-terminal domain 703 747 2.9E-11 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain Amet_1004 8f804c43965aeafb7e01c50f78575aa2 769 Pfam PF13245 AAA domain 202 568 4.1E-10 T 12-10-2018 Amet_1004 8f804c43965aeafb7e01c50f78575aa2 769 Gene3D G3DSA:3.40.50.300 189 337 1.5E-10 T 12-10-2018 Amet_1004 8f804c43965aeafb7e01c50f78575aa2 769 Gene3D G3DSA:3.40.50.300 594 769 8.9E-48 T 12-10-2018 Amet_1004 8f804c43965aeafb7e01c50f78575aa2 769 Gene3D G3DSA:3.40.50.300 377 583 1.2E-9 T 12-10-2018 Amet_0860 85b351c460a7b18a5e1663861d53340c 73 Pfam PF11148 Protein of unknown function (DUF2922) 3 69 1.2E-22 T 12-10-2018 IPR021321 Protein of unknown function DUF2922 Amet_3396 66a40a3a5fb75b04479d0efc352614b6 321 Pfam PF03547 Membrane transport protein 173 310 1.7E-15 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Amet_3396 66a40a3a5fb75b04479d0efc352614b6 321 Pfam PF03547 Membrane transport protein 11 152 4.8E-7 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Amet_2034 4bee4a59cac4f74e0a1198ce9a33b5e8 62 Pfam PF10133 Predicted RNA-binding protein 1 59 1.1E-23 T 12-10-2018 IPR019300 RNA-binding protein, predicted Amet_3566 aa02cc76ee99455767442e0161501da7 106 Pfam PF11381 Protein of unknown function (DUF3185) 37 94 2.3E-15 T 12-10-2018 IPR021521 Protein of unknown function DUF3185 Amet_3340 00858b472df832345e2dbb710ddb8135 120 Pfam PF07875 Coat F domain 35 94 9.1E-11 T 12-10-2018 IPR012851 Spore coat protein CotF-like Amet_0596 f3a274326882e721b9f60b960404a048 105 Gene3D G3DSA:3.30.2310.20 1 103 9.5E-12 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Amet_0596 f3a274326882e721b9f60b960404a048 105 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 10 101 3.6E-7 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Amet_0893 8eee1603d2e662e32bd7dc966b6b0dee 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 119 9.7E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Amet_0893 8eee1603d2e662e32bd7dc966b6b0dee 131 SUPERFAMILY SSF54593 2 124 2.61E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_0893 8eee1603d2e662e32bd7dc966b6b0dee 131 Gene3D G3DSA:3.10.180.10 2 119 5.4E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Amet_1390 52d6d14b5de3bf0a313c1ea3148ef833 159 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 136 3.0E-26 T 12-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Amet_4016 ed39b33b518832536d467b2fc6080097 138 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 14 132 1.5E-27 T 12-10-2018 IPR006480 Bacteriophage holin family Amet_4016 ed39b33b518832536d467b2fc6080097 138 Pfam PF05105 Bacteriophage holin family 18 130 2.4E-41 T 12-10-2018 IPR006480 Bacteriophage holin family Amet_0711 6c280530c8c95f1d5527ee1a5ee9d282 308 Pfam PF03547 Membrane transport protein 9 157 4.7E-20 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Amet_0711 6c280530c8c95f1d5527ee1a5ee9d282 308 Pfam PF03547 Membrane transport protein 165 304 9.0E-19 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Amet_2991 f2652ba304c03a246b54693e4fffd3c8 233 Pfam PF12847 Methyltransferase domain 7 155 4.2E-59 T 12-10-2018 Amet_2991 f2652ba304c03a246b54693e4fffd3c8 233 SUPERFAMILY SSF53335 10 141 1.31E-14 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Amet_2991 f2652ba304c03a246b54693e4fffd3c8 233 Gene3D G3DSA:3.40.50.150 1 163 1.0E-57 T 12-10-2018 Amet_2991 f2652ba304c03a246b54693e4fffd3c8 233 PIRSF PIRSF018637 3 231 8.6E-89 T 12-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 Amet_1578 455b982b7ac4fdfdf183002cc975ab60 244 Pfam PF01925 Sulfite exporter TauE/SafE 12 237 1.6E-28 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Amet_1359 bc02b5de88d2eb5ba9c912ea30cca587 186 Gene3D G3DSA:1.20.120.520 2 186 2.2E-27 T 12-10-2018 Amet_1359 bc02b5de88d2eb5ba9c912ea30cca587 186 Pfam PF01814 Hemerythrin HHE cation binding domain 4 138 3.0E-15 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Amet_1491 3f8f8208f029ad9beca8aa85d3e6b144 411 Pfam PF04235 Protein of unknown function (DUF418) 249 410 3.6E-47 T 12-10-2018 IPR007349 Domain of unknown function DUF418 Amet_1594 78d5f2bc8f89bd8cabc17fe6e92cd3f3 485 Gene3D G3DSA:1.10.443.10 154 371 1.8E-20 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Amet_1594 78d5f2bc8f89bd8cabc17fe6e92cd3f3 485 SUPERFAMILY SSF56349 54 367 5.0E-24 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Amet_1594 78d5f2bc8f89bd8cabc17fe6e92cd3f3 485 Pfam PF00589 Phage integrase family 162 361 1.7E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Amet_1216 4e8933f083e00a788009c10d95013772 247 Pfam PF03591 AzlC protein 34 175 1.0E-37 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease Amet_1070 e995c2e803f24079499866dae4248af1 183 Pfam PF02417 Chromate transporter 7 170 4.2E-46 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Amet_4297 49373b1954981758126f6334f3dce61a 206 Pfam PF01844 HNH endonuclease 136 191 2.9E-7 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 Amet_3788 5a607bd47829db557edea9ac7efc00a7 355 Gene3D G3DSA:3.40.190.170 53 355 7.6E-83 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Amet_3788 5a607bd47829db557edea9ac7efc00a7 355 PIRSF PIRSF006470 32 355 1.7E-68 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Amet_3788 5a607bd47829db557edea9ac7efc00a7 355 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 59 339 2.4E-65 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Amet_4196 04e05e5276a6ba728c35461be929626f 101 SUPERFAMILY SSF52794 1 100 7.06E-34 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 Amet_4196 04e05e5276a6ba728c35461be929626f 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 7.8E-19 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 Amet_4196 04e05e5276a6ba728c35461be929626f 101 Gene3D G3DSA:3.40.50.2300 2 101 6.5E-32 T 12-10-2018 Amet_3425 f748d9f4bf2d096f14f1e698f7dc7b9a 440 Pfam PF14398 YheC/D like ATP-grasp 182 435 1.8E-60 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D Amet_4594 0ef1562d117a271c1be09acda0aa876a 334 Pfam PF11553 Protein of unknown function (DUF3231) 169 330 6.8E-60 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 Amet_4594 0ef1562d117a271c1be09acda0aa876a 334 Pfam PF11553 Protein of unknown function (DUF3231) 3 161 1.5E-58 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 Amet_4594 0ef1562d117a271c1be09acda0aa876a 334 Gene3D G3DSA:1.20.1260.10 4 147 2.8E-11 T 12-10-2018 IPR012347 Ferritin-like Amet_4594 0ef1562d117a271c1be09acda0aa876a 334 Gene3D G3DSA:1.20.1260.10 173 318 1.5E-5 T 12-10-2018 IPR012347 Ferritin-like Amet_4745 bf30ec18e62a16e2ff28edb612d014ab 470 Pfam PF12704 MacB-like periplasmic core domain 21 278 1.1E-6 T 12-10-2018 IPR025857 MacB-like periplasmic core domain Amet_4745 bf30ec18e62a16e2ff28edb612d014ab 470 Pfam PF02687 FtsX-like permease family 335 462 6.5E-22 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Amet_2826 0958f0dab9c3d4bc06c08f36d5e11bd7 294 Gene3D G3DSA:3.40.109.30 176 266 5.4E-8 T 12-10-2018 Amet_2826 0958f0dab9c3d4bc06c08f36d5e11bd7 294 Gene3D G3DSA:3.40.109.10 3 152 6.3E-29 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_2826 0958f0dab9c3d4bc06c08f36d5e11bd7 294 SUPERFAMILY SSF55469 194 266 2.09E-7 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_2826 0958f0dab9c3d4bc06c08f36d5e11bd7 294 Pfam PF14512 Putative TM nitroreductase 11 254 4.1E-41 T 12-10-2018 IPR029478 Putative nitroreductase TM1586 Amet_2826 0958f0dab9c3d4bc06c08f36d5e11bd7 294 SUPERFAMILY SSF55469 12 159 3.02E-23 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Amet_0725 bce1b4edcd779ea6ce65f96fed532249 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 35 89 8.8E-18 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Amet_0725 bce1b4edcd779ea6ce65f96fed532249 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 9 89 3.9E-13 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Amet_0725 bce1b4edcd779ea6ce65f96fed532249 97 SUPERFAMILY SSF101498 9 89 7.98E-15 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Amet_2430 9cf8e592f4f9d8a57ba3ce88d734477e 355 Pfam PF04865 Baseplate J-like protein 62 310 9.0E-65 T 12-10-2018 IPR006949 Baseplate protein J-like Amet_1818 6f186a52704dfd949180976cca23579d 117 TIGRFAM TIGR04104 cxxc_20_cxxc: cxxc_20_cxxc protein 2 90 2.1E-23 T 12-10-2018 IPR026369 CxxC-20-CxxC protein Amet_2976 0358b3a6642aaa34c75171c6e1c8348b 400 Pfam PF01566 Natural resistance-associated macrophage protein 46 369 3.1E-25 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Amet_2835 84b9e55125f5ccb96b08e65e1227eecd 252 Pfam PF09851 Short C-terminal domain 222 249 2.6E-8 T 12-10-2018 IPR018649 SHOCT domain Amet_0743 315e0665e9c3e005c8f2a183c13e2e1b 288 Pfam PF12784 PD-(D/E)XK nuclease family transposase 8 243 3.2E-72 T 12-10-2018 Amet_0743 315e0665e9c3e005c8f2a183c13e2e1b 288 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 279 7.7E-40 T 12-10-2018 IPR010106 Recombination-promoting nuclease RpnA Amet_3277 32dd14018f7d1db62f709faa449f3238 80 Pfam PF11666 Protein of unknown function (DUF2933) 38 68 1.8E-4 T 12-10-2018 IPR021682 Protein of unknown function DUF2933 Amet_2802 cd280afcc9514cd4ba399783e4226d08 94 Pfam PF02325 YGGT family 13 84 1.2E-16 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 Amet_0806 48cc6d175a9bf085c9d40d8ae1ef6e61 216 SUPERFAMILY SSF52540 9 203 5.32E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_0806 48cc6d175a9bf085c9d40d8ae1ef6e61 216 Pfam PF00005 ABC transporter 25 167 4.0E-7 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Amet_0806 48cc6d175a9bf085c9d40d8ae1ef6e61 216 Gene3D G3DSA:3.40.50.300 7 211 1.8E-18 T 12-10-2018 Amet_4645 2283806d3d301023bf16bf01c582f2d3 475 Pfam PF04389 Peptidase family M28 272 458 1.7E-27 T 12-10-2018 IPR007484 Peptidase M28 Amet_4645 2283806d3d301023bf16bf01c582f2d3 475 SUPERFAMILY SSF53187 79 465 5.24E-42 T 12-10-2018 Amet_2252 231d922591aa4b86a548cc68d8050032 169 SUPERFAMILY SSF55729 1 140 1.38E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_2252 231d922591aa4b86a548cc68d8050032 169 Gene3D G3DSA:3.40.630.30 1 155 2.6E-21 T 12-10-2018 Amet_2252 231d922591aa4b86a548cc68d8050032 169 Pfam PF00583 Acetyltransferase (GNAT) family 62 131 3.2E-11 T 12-10-2018 IPR000182 GNAT domain Amet_2765 1c740702b6dc439fccbc5b37dd55443d 413 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 13 395 9.0E-105 T 12-10-2018 IPR014226 Sporulation integral membrane protein YlbJ Amet_4049 c7fc8bd37111396664085c7307749374 782 Pfam PF05272 Virulence-associated protein E 451 650 3.5E-61 T 12-10-2018 IPR007936 Virulence-associated E Amet_3768 804e040fabc3c10b12e1599eb679a8ef 75 Gene3D G3DSA:2.30.30.320 4 75 6.0E-27 T 12-10-2018 IPR037135 DUF1653-like domain superfamily Amet_3768 804e040fabc3c10b12e1599eb679a8ef 75 Pfam PF07866 Protein of unknown function (DUF1653) 13 73 3.8E-27 T 12-10-2018 IPR023387 DUF1653-like domain Amet_2428 8f5ec4508e67bc249d9f32671368f50f 129 Pfam PF10844 Protein of unknown function (DUF2577) 9 125 2.0E-24 T 12-10-2018 IPR022555 Protein of unknown function, DUF2577 Amet_2598 21f59a69b2abe97b440d5e669630e305 125 Pfam PF06356 Protein of unknown function (DUF1064) 16 124 1.1E-40 T 12-10-2018 IPR009414 Protein of unknown function DUF1064 Amet_0529 0715dc3b5303f6fc2c19fadf79ce0865 242 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 123 234 6.2E-22 T 12-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF Amet_3663 2ed75c09461bee7684cc05c3548d1183 116 SUPERFAMILY SSF52266 75 107 8.46E-5 T 12-10-2018 Amet_2715 fc2a5e41d6d6a9f0101dcae50555ffe1 65 Pfam PF06289 Flagellar protein (FlbD) 1 59 2.0E-29 T 12-10-2018 IPR009384 Swarming motility protein SwrD-like Amet_0296 532fcb6be901a5fa9a2bb574b7571d59 280 Pfam PF01618 MotA/TolQ/ExbB proton channel family 111 228 5.3E-23 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Amet_2231 6e08f13afe90d6afffdef72184fd949b 122 Pfam PF01925 Sulfite exporter TauE/SafE 2 109 5.6E-19 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Amet_4002 d22f1f79d06ad92e9b899025451bb3c5 528 Pfam PF14281 PD-(D/E)XK nuclease superfamily 32 290 4.1E-39 T 12-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 Amet_4002 d22f1f79d06ad92e9b899025451bb3c5 528 Pfam PF14281 PD-(D/E)XK nuclease superfamily 332 485 4.2E-8 T 12-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 Amet_1996 6c5e269b77ea77b362158033d2fe8ed8 262 Pfam PF09359 VTC domain 7 232 1.5E-40 T 12-10-2018 IPR018966 VTC domain Amet_1996 6c5e269b77ea77b362158033d2fe8ed8 262 Gene3D G3DSA:2.40.320.20 1 230 6.7E-12 T 12-10-2018 Amet_0341 d46b7beed3013394dcaafa323506a309 346 ProSitePatterns PS01348 MraY family signature 2. 149 160 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_0341 d46b7beed3013394dcaafa323506a309 346 Pfam PF00953 Glycosyl transferase family 4 73 229 5.2E-45 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Amet_3895 da4a9b01377817577a92685bff3856f6 175 SUPERFAMILY SSF143422 8 65 1.83E-10 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3895 da4a9b01377817577a92685bff3856f6 175 Gene3D G3DSA:3.30.70.1290 1 103 5.1E-23 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_1799 d3cd11ad8f925c2fc766887dbe0b385a 240 Pfam PF14285 Domain of unknown function (DUF4367) 131 239 1.4E-15 T 12-10-2018 IPR025377 Domain of unknown function DUF4367 Amet_2145 769a072fe50e4765e737d5b3c2e0f6ce 404 Pfam PF02195 ParB-like nuclease domain 80 155 6.6E-5 T 12-10-2018 IPR003115 ParB/Sulfiredoxin Amet_1789 15b6835bb3fb42bc16da6b1b93f17bfe 213 Gene3D G3DSA:1.10.4030.30 39 176 8.1E-7 T 12-10-2018 Amet_1789 15b6835bb3fb42bc16da6b1b93f17bfe 213 Pfam PF13623 SurA N-terminal domain 12 143 2.0E-9 T 12-10-2018 Amet_1789 15b6835bb3fb42bc16da6b1b93f17bfe 213 SUPERFAMILY SSF109998 51 170 5.89E-10 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily Amet_4024 0d72c3dd4b0cdb1bce8b678db4b664a7 143 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 10 140 1.3E-13 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component Amet_4024 0d72c3dd4b0cdb1bce8b678db4b664a7 143 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 10 107 2.1E-10 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component Amet_4496 d7cc307f8e8c0d80d8244ab2235e7c5a 169 Pfam PF05991 YacP-like NYN domain 5 167 7.6E-55 T 12-10-2018 IPR010298 Protein of unknown function DUF901 Amet_4279 f22f75a8407fd5d342d38b0f632c8a7d 288 Pfam PF02517 CAAX protease self-immunity 126 233 1.2E-16 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_4135 ce73f726a508feaaebe50dbc6023c941 942 Pfam PF09992 Phosphodiester glycosidase 208 386 9.2E-32 T 12-10-2018 IPR018711 Phosphodiester glycosidase Amet_4773 a05f3a9ee8a501944f999604b5785778 336 Pfam PF06081 Aromatic acid exporter family member 1 1 142 6.1E-25 T 12-10-2018 IPR010343 Aromatic acid exporter family member 1 Amet_3883 4e28334f7cef3ba9a725e541a17de0f4 99 Pfam PF14104 Domain of unknown function (DUF4277) 4 88 5.3E-15 T 12-10-2018 IPR025457 Domain of unknown function DUF4277 Amet_4331 50206ed0d1c898fabd93398cfbd72b50 127 Pfam PF07009 NusG domain II 8 118 4.6E-26 T 12-10-2018 IPR024045 NusG, domain 2 Amet_4331 50206ed0d1c898fabd93398cfbd72b50 127 Gene3D G3DSA:2.60.320.10 29 124 3.5E-23 T 12-10-2018 IPR038690 NusG, domain 2 superfamily Amet_4724 23418fcbd3635db72fcf3c0d6053d5df 309 SMART SM00014 147 258 0.0024 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amet_4724 23418fcbd3635db72fcf3c0d6053d5df 309 SUPERFAMILY SSF48317 107 261 4.45E-35 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Amet_4724 23418fcbd3635db72fcf3c0d6053d5df 309 Pfam PF01569 PAP2 superfamily 160 258 2.5E-16 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Amet_4724 23418fcbd3635db72fcf3c0d6053d5df 309 Gene3D G3DSA:1.10.606.20 31 270 6.7E-42 T 12-10-2018 Amet_2370 9395612ce166008da34ebfb712b87adf 121 Pfam PF16552 D-ornithine 4,5-aminomutase alpha-subunit 2 116 7.2E-57 T 12-10-2018 IPR015130 D-Lysine 5,6-aminomutase alpha subunit Amet_2370 9395612ce166008da34ebfb712b87adf 121 SUPERFAMILY SSF51703 17 117 2.2E-14 T 12-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Amet_2370 9395612ce166008da34ebfb712b87adf 121 Gene3D G3DSA:1.10.8.1000 45 121 2.9E-36 T 12-10-2018 Amet_4637 0985ede22f69dee71c3d9a293fbfeaa2 440 SUPERFAMILY SSF82171 41 335 1.44E-5 T 12-10-2018 Amet_0095 7856339fbe5d8ddda62f064f9c4ee5e2 191 Pfam PF07670 Nucleoside recognition 42 148 3.3E-10 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Amet_2375 a86df4cca7dd70bd35ab75c03ece7929 140 Gene3D G3DSA:1.20.5.340 5 131 5.2E-6 T 12-10-2018 Amet_3840 c710f808884272c55bf2af37f6159da8 377 SUPERFAMILY SSF103481 121 190 3.01E-6 T 12-10-2018 Amet_4439 06645a8444ff6f8081d460a383ee3b83 127 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 22 121 1.6E-15 T 12-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Amet_1114 6b3fd2e53fe78b216227aca4d1a7f32e 196 Pfam PF12672 Protein of unknown function (DUF3793) 20 185 1.5E-33 T 12-10-2018 IPR024523 Protein of unknown function DUF3793 Amet_1611 9d1ef817100f35ca91ee0cc5285cd2ee 666 SUPERFAMILY SSF55874 26 143 4.97E-6 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Amet_2429 380e608b9fcc9ae4f8351f35336c68a0 146 Pfam PF10934 Protein of unknown function (DUF2634) 26 130 8.3E-32 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 Amet_2429 380e608b9fcc9ae4f8351f35336c68a0 146 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 44 136 3.0E-47 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 Amet_1299 8338efbd17db9bb9d5e7d298d39f4b57 66 Pfam PF11213 Protein of unknown function (DUF3006) 3 64 5.7E-22 T 12-10-2018 IPR021377 Protein of unknown function DUF3006 Amet_3823 3c68e385efa106f93791a6640333bcfd 218 Pfam PF06130 Phosphate propanoyltransferase 34 113 4.6E-27 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Amet_3823 3c68e385efa106f93791a6640333bcfd 218 Pfam PF06130 Phosphate propanoyltransferase 143 208 4.3E-15 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Amet_3823 3c68e385efa106f93791a6640333bcfd 218 PIRSF PIRSF010130 1 218 5.3E-82 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Amet_3969 e22431ac56267c7448a406c29dc6920e 282 Pfam PF03432 Relaxase/Mobilisation nuclease domain 5 218 6.5E-43 T 12-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 Amet_2584 9946ff213670d266d06fbd1d09ba4aeb 230 Pfam PF16784 Putative HNHc nuclease 37 211 1.2E-40 T 12-10-2018 Amet_3728 48c89346d5462f5eda4f4036f716a47b 212 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 37 165 1.9E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Amet_4082 1419b08d3546ab8199464dbe38a282f1 226 Pfam PF07833 Copper amine oxidase N-terminal domain 71 171 9.0E-18 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_4082 1419b08d3546ab8199464dbe38a282f1 226 SUPERFAMILY SSF55383 74 165 6.02E-12 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_2447 0589394f5a162a27208ba4a2b9437c96 106 Pfam PF11823 Protein of unknown function (DUF3343) 16 77 5.6E-13 T 12-10-2018 IPR021778 Domain of unknown function DUF3343 Amet_0003 9121a560d7fcb671e7c72e796cb85c15 69 Gene3D G3DSA:3.10.290.10 1 69 8.0E-23 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Amet_0003 9121a560d7fcb671e7c72e796cb85c15 69 Pfam PF13275 S4 domain 5 68 2.2E-23 T 12-10-2018 Amet_0003 9121a560d7fcb671e7c72e796cb85c15 69 SUPERFAMILY SSF55174 2 67 4.58E-19 T 12-10-2018 Amet_2558 155050a20f8dcb764577dfa265f505a1 298 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 8 157 6.5E-41 T 12-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 Amet_1606 d989356581f297c78251cc89e36e803f 74 TIGRFAM TIGR04540 CLB_0814_fam: conserved hypothetical protein 3 74 1.0E-27 T 12-10-2018 IPR030902 Conserved hypothetical protein Amet_1145 5e5f6874a2b2c3aceddb6b72f6484106 179 Pfam PF13244 Domain of unknown function (DUF4040) 8 70 4.1E-16 T 12-10-2018 IPR025383 Domain of unknown function DUF4040 Amet_1896 5571b1b43156144b749bcdb9dff02222 181 Pfam PF12867 DinB superfamily 20 168 1.2E-16 T 12-10-2018 IPR024775 DinB-like domain Amet_4531 a5d52a036c175a1ce750215248246367 427 Pfam PF02447 GntP family permease 2 249 2.4E-12 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Amet_0021 55be2baf6dc784339d7e5e92f5ac7dc0 349 Pfam PF13303 Phosphotransferase system, EIIC 16 347 4.7E-113 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Amet_0861 53be1fb9ce13cff4ba3c25710d99f042 74 Pfam PF07872 Protein of unknown function (DUF1659) 15 49 2.6E-6 T 12-10-2018 IPR012454 Protein of unknown function DUF1659 Amet_2264 96b980b28db25b09b77cb3731de73c23 143 Pfam PF01541 GIY-YIG catalytic domain 26 65 8.0E-5 T 12-10-2018 IPR000305 GIY-YIG endonuclease Amet_4422 8f54f4a9c7f399e9c87e0db4b8dac6ee 120 SUPERFAMILY SSF47240 3 91 2.92E-22 T 12-10-2018 IPR009078 Ferritin-like superfamily Amet_4422 8f54f4a9c7f399e9c87e0db4b8dac6ee 120 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 5 119 1.1E-48 T 12-10-2018 IPR030907 Ferritin-like protein Amet_0013 7d485e15c895e824a77c0c86e975a51f 154 Pfam PF06177 QueT transporter 7 147 1.4E-45 T 12-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 Amet_0013 7d485e15c895e824a77c0c86e975a51f 154 PIRSF PIRSF031501 1 152 8.6E-39 T 12-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 Amet_4504 44c4e5e1220c1b3c61986400dbb2c6d0 274 Pfam PF06207 Protein of unknown function (DUF1002) 18 236 5.1E-83 T 12-10-2018 IPR009343 Protein of unknown function DUF1002 Amet_1910 cf430340b1fa6668a4cae7ab401a86e9 486 Pfam PF05598 Transposase domain (DUF772) 56 126 1.6E-9 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_2188 cf430340b1fa6668a4cae7ab401a86e9 486 Pfam PF05598 Transposase domain (DUF772) 56 126 1.6E-9 T 12-10-2018 IPR008490 Transposase InsH, N-terminal Amet_0814 3f34dc88a4d93ea8b5c7db4870a96e3e 271 Pfam PF03780 Asp23 family, cell envelope-related function 212 267 7.4E-8 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 Amet_0814 3f34dc88a4d93ea8b5c7db4870a96e3e 271 SUPERFAMILY SSF52540 3 149 2.7E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_4669 5cd9033be6b4c29cdc252d83c9c53c11 347 Pfam PF12698 ABC-2 family transporter protein 20 336 4.5E-16 T 12-10-2018 Amet_1655 22dd86958ed0da7132623ac284e8ab0c 452 SUPERFAMILY SSF55383 28 74 4.32E-6 T 12-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Amet_1655 22dd86958ed0da7132623ac284e8ab0c 452 Pfam PF07833 Copper amine oxidase N-terminal domain 49 79 6.0E-8 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_0079 f75aa8846bcdd9dafc760273cc27b76f 61 Pfam PF10764 Inhibitor of sigma-G Gin 7 51 3.6E-15 T 12-10-2018 IPR019700 Anti-sigma-G factor Gin Amet_4118 c77e25a3bdde440ed2261167202ff666 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 275 1.6E-42 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_4256 243a0359589d089689d69abdb108c578 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 416 1.2E-48 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4256 243a0359589d089689d69abdb108c578 447 PIRSF PIRSF006603 1 447 8.7E-64 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4256 243a0359589d089689d69abdb108c578 447 Pfam PF01554 MatE 22 182 3.9E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_4256 243a0359589d089689d69abdb108c578 447 Pfam PF01554 MatE 252 402 1.3E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_1016 7c001124ef5980ca40ffc6e44420f603 141 Pfam PF07670 Nucleoside recognition 20 96 7.0E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Amet_2396 c084598ae7cd37ced864ac6d8ecf7831 246 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 42 212 1.3E-5 T 12-10-2018 IPR019276 Protein of unkown function DUF2303 Amet_4163 87468a89d5b79ecff20a2e670af0043a 258 Pfam PF12698 ABC-2 family transporter protein 55 239 2.3E-8 T 12-10-2018 Amet_0474 293ae32d7ee9bb229595ecfc8e650b1b 110 Pfam PF12986 Domain of unknown function (DUF3870) 8 100 7.0E-37 T 12-10-2018 IPR024617 Domain of unknown function DUF3870 Amet_3268 8a6639f38cc04965e237188ee3647f61 181 Pfam PF09335 SNARE associated Golgi protein 20 134 1.0E-24 T 12-10-2018 IPR032816 SNARE associated Golgi protein Amet_4329 a4f5f024d6768fe1fd38fbc030f9b676 104 Pfam PF01169 Uncharacterized protein family UPF0016 8 82 7.1E-23 T 12-10-2018 IPR001727 Gdt1 family Amet_3512 f938274d237965a4f92a94e287c4e85b 161 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 11 156 1.5E-11 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 Amet_1560 4c1ff649325c7b39ad3a91bc0d3e0aa6 413 Pfam PF04235 Protein of unknown function (DUF418) 250 411 3.5E-45 T 12-10-2018 IPR007349 Domain of unknown function DUF418 Amet_4754 99f6c6eef90eadae77d4c3b5c5ed4bc6 295 Pfam PF09648 YycH protein 40 293 1.5E-30 T 12-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 Amet_0498 40f6a3a4d4cc258d51a09856c848a563 219 Pfam PF01554 MatE 10 168 2.3E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Amet_2408 f09002c6611fec11b64ce57a55cafaeb 216 Pfam PF10668 Phage terminase small subunit 1 55 4.7E-18 T 12-10-2018 IPR018925 Phage terminase small subunit Amet_1426 6a71e8efac20cf46db4346656bac5d25 272 Pfam PF04294 VanW like protein 70 202 1.1E-39 T 12-10-2018 IPR007391 Vancomycin resistance VanW Amet_2012 96cd147d20507b3e375ca08628eae1ef 177 Gene3D G3DSA:1.10.15.40 113 166 4.8E-18 T 12-10-2018 Amet_2012 96cd147d20507b3e375ca08628eae1ef 177 Pfam PF04060 Putative Fe-S cluster 121 153 1.6E-13 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 Amet_0785 7d0176ad430180889da577607c67fd44 558 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 247 545 5.7E-48 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Amet_0785 7d0176ad430180889da577607c67fd44 558 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 8 117 3.4E-24 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Amet_0785 7d0176ad430180889da577607c67fd44 558 Pfam PF07196 Flagellin hook IN motif 144 202 7.4E-5 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Amet_3801 027667420343d5a79ddaa5e2af2ad503 190 Gene3D G3DSA:3.30.70.1290 3 103 2.8E-13 T 12-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Amet_3130 e01844131db09ced8c5b5e1b9f98a971 523 Pfam PF01609 Transposase DDE domain 200 467 5.1E-12 T 12-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Amet_1566 bb8061bc458c3e1c9860bec9d6e8883f 457 Pfam PF01098 Cell cycle protein 81 445 1.6E-41 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Amet_4284 10988af4740127249ded1c98726fe649 227 Pfam PF02163 Peptidase family M50 27 201 1.2E-7 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Amet_0949 c083dde0871ac121a40af7332cd48d78 323 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 5 297 3.8E-39 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Amet_0949 c083dde0871ac121a40af7332cd48d78 323 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 10 304 7.7E-35 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Amet_0840 039f89f185661ce72b0e19829f458441 81 Pfam PF12728 Helix-turn-helix domain 17 64 2.1E-7 T 12-10-2018 Amet_3885 6303bb25f76cd577e6a5b1deb2963511 305 Pfam PF16138 Domain of unknown function (4846) 63 303 3.1E-107 T 12-10-2018 IPR032315 Protein of unknown function DUF4846 Amet_2180 46f2476f2ddcd4a30c4b968c835a0de7 359 Pfam PF01594 AI-2E family transporter 16 347 1.2E-75 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like Amet_1265 0026b194f02df942e6096aba9090dd48 160 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 10 154 2.6E-12 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 Amet_2121 bf155082860fae90449e2c38dc7bf09f 222 Pfam PF02517 CAAX protease self-immunity 86 204 2.7E-13 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_0219 6c723e459eae39dc6b398737cb1b169a 88 SUPERFAMILY SSF46785 24 86 1.32E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Amet_2460 9448ec969340431c4032096cc12e1f73 725 SUPERFAMILY SSF53098 501 607 4.93E-5 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily Amet_4063 705d8e9ac9787c6fcd32d56094055de0 131 Pfam PF04186 FxsA cytoplasmic membrane protein 8 114 3.3E-31 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 Amet_1713 5319ec18b86aa71860605b6c81863cd9 143 Pfam PF04463 Protein of unknown function (DUF523) 2 142 2.6E-44 T 12-10-2018 IPR007553 Domain of unknown function DUF523 Amet_3363 fbe5c7c096a394b8783978fc5d9b5401 394 Pfam PF14319 Transposase zinc-binding domain 6 111 7.0E-34 T 12-10-2018 IPR026889 Transposase zinc-binding domain Amet_3363 fbe5c7c096a394b8783978fc5d9b5401 394 Pfam PF04986 Putative transposase 138 323 4.6E-60 T 12-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 Amet_3699 d05cffe2ff1acb138473912494fd75f1 187 Pfam PF17248 Family of unknown function (DUF5317) 26 179 1.1E-39 T 12-10-2018 IPR035168 Protein of unknown function DUF5317 Amet_1997 b5adb8fa2723179d587ffd68cff38924 228 Pfam PF16316 Domain of unknown function (DUF4956) 44 149 9.6E-14 T 12-10-2018 IPR032531 Protein of unknown function DUF4956 Amet_1271 63fe567e0da3805114fb27b0fd561abb 132 Pfam PF06103 Bacterial protein of unknown function (DUF948) 20 93 1.3E-8 T 12-10-2018 IPR009293 Uncharacterised protein family UPF0478 Amet_2578 6393c3227b2bf4d1710bea539d6b6d28 498 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 51 417 7.2E-16 T 12-10-2018 IPR021145 Portal protein Amet_1654 469a52cc8e6aa5d89b421afa29c7a6f9 231 Pfam PF09335 SNARE associated Golgi protein 64 187 1.9E-25 T 12-10-2018 IPR032816 SNARE associated Golgi protein Amet_1036 2f02195df770de6b0477b3e257b973bc 289 Pfam PF02517 CAAX protease self-immunity 142 229 1.0E-18 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Amet_3269 3b859d2e9e6fc69fb6649d44b68782b5 75 Pfam PF09851 Short C-terminal domain 47 73 4.6E-11 T 12-10-2018 IPR018649 SHOCT domain Amet_4786 8a5a3da19ac1a319f95fa0f486f34bbe 86 Pfam PF03698 Uncharacterised protein family (UPF0180) 2 79 3.2E-22 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 Amet_4455 7f5bee7e35d130f40c86b1d4e31244d0 94 SUPERFAMILY SSF50104 8 85 7.22E-13 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily Amet_3473 f6f04aa8b28038b575b75563781415bb 187 Pfam PF05137 Fimbrial assembly protein (PilN) 106 177 2.1E-10 T 12-10-2018 IPR007813 Fimbrial assembly PilN Amet_4414 94f34396d31a6ec0a50344af37d6468d 73 Pfam PF07833 Copper amine oxidase N-terminal domain 17 51 1.4E-6 T 12-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Amet_3489 331b00de6079044e75ebcd9539915cfc 358 SUPERFAMILY SSF55729 198 344 5.61E-6 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase Amet_4771 b3d4eb85e97a0e05695c681443f22aac 309 Pfam PF09991 Predicted membrane protein (DUF2232) 19 298 1.3E-70 T 12-10-2018 IPR018710 Protein of unknown function DUF2232 Amet_0839 586b684bff2db256089e77bcbdba390e 70 SUPERFAMILY SSF47413 5 58 1.79E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Amet_0839 586b684bff2db256089e77bcbdba390e 70 Gene3D G3DSA:1.10.260.40 3 66 1.5E-5 T 12-10-2018 Amet_4117 f61cc32adb9d5833e29555549aed8a7c 360 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 314 5.2E-46 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Amet_2840 64931427a073362dcee0734c2981b33b 570 SUPERFAMILY SSF52540 21 147 2.0E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Amet_3111 082a7165da452f79f06f460571b0df8d 141 Pfam PF04657 Putative inner membrane exporter, YdcZ 3 136 1.5E-26 T 12-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Amet_2500 584fc3a8b76d3ad9ae4d8ea79de147c5 130 Pfam PF03780 Asp23 family, cell envelope-related function 9 113 3.4E-40 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 Amet_2498 72f58f12e871df08a63855c11fd460d2 196 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 19 196 1.2E-47 T 12-10-2018 IPR014195 Sporulation stage III, protein AG Amet_1408 2fa9f4cbcec754a0b23cce0dd21a5260 315 Pfam PF11185 Protein of unknown function (DUF2971) 104 214 8.7E-13 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 Amet_0559 90cee1c98fb9f2ef59723cc494fa79e5 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 149 1.6E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Amet_2103 6b19405ad4bce8bc4cf103c99d6ea98e 151 Pfam PF11188 Protein of unknown function (DUF2975) 46 151 3.8E-10 T 12-10-2018 IPR021354 Protein of unknown function DUF2975 Amet_3471 3ada91ca91fecfbc81681240758e1df6 571 Pfam PF00395 S-layer homology domain 448 487 1.2E-8 T 12-10-2018 IPR001119 S-layer homology domain Amet_0116 e1641f4a06799050c1d4b04666d316f1 93 Pfam PF05717 IS66 Orf2 like protein 1 82 8.5E-30 T 12-10-2018 IPR008878 Transposase IS66, Orf2 Amet_1683 6ff8e0d01024e5357c474330778282c3 56 Pfam PF12655 Domain of unknown function (DUF3787) 5 56 8.9E-27 T 12-10-2018 IPR024209 Protein of unknown function DUF3787 Amet_2031 56ce32be2e8cc419ccaa5bd1853c0ba7 226 Pfam PF12654 Domain of unknown function (DUF3786) 28 201 4.8E-55 T 12-10-2018 IPR024264 Domain of unknown function DUF3786 Amet_1221 33438a771b453564f03700e6e714eb9d 124 Pfam PF03780 Asp23 family, cell envelope-related function 17 123 6.2E-30 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 Amet_3738 40d68795fb8858619bffa45383aa97f5 347 Pfam PF03601 Conserved hypothetical protein 698 9 324 7.4E-77 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Amet_2772 c3f7b001fa546fee1f1d52f5ace9a49c 118 Pfam PF03780 Asp23 family, cell envelope-related function 10 115 4.1E-35 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 Amet_0694 f54738e86d0d3c0a21b3a388adee3e89 558 Pfam PF03553 Na+/H+ antiporter family 189 510 5.1E-60 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Amet_0215 3a28b6dacac328bfc268e53b3efc5af6 143 Pfam PF14134 Domain of unknown function (DUF4301) 2 142 1.1E-26 T 12-10-2018 IPR025393 Domain of unknown function DUF4301 Amet_0829 7bba781161715d1916bc157ac8e23d3d 447 Pfam PF03413 Peptidase propeptide and YPEB domain 201 263 0.0041 T 12-10-2018 IPR025711 PepSY domain Amet_4369 3410789693c600a2a05e79bd2a57d1be 139 Pfam PF11985 Protein of unknown function (DUF3486) 11 138 2.1E-29 T 12-10-2018 IPR021874 Bacteriophage Mu, Gp27 Amet_3297 29404bfa380e1427ef268a6b71fdfa35 263 Pfam PF09335 SNARE associated Golgi protein 78 194 1.3E-22 T 12-10-2018 IPR032816 SNARE associated Golgi protein Amet_1230 fe10518ebe56f4a073fe34c3080a3518 327 Pfam PF03773 Predicted permease 35 324 1.4E-69 T 12-10-2018 IPR005524 Predicted permease DUF318