Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Pfam PF01138 3' exoribonuclease family, domain 1 322 455 5.1E-19 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 2.8E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 SMART SM00322 551 616 2.7E-12 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Gene3D G3DSA:2.40.50.140 621 691 1.2E-28 T 11-10-2018 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 692 30.799 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Gene3D G3DSA:3.30.230.70 2 228 1.0E-81 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 SMART SM00316 619 689 1.1E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 SUPERFAMILY SSF50249 619 698 3.04E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 318 4.9E-10 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 4.9E-15 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Pfam PF03725 3' exoribonuclease family, domain 2 458 526 8.1E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Gene3D G3DSA:3.30.1370.10 549 620 2.4E-20 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 SUPERFAMILY SSF54791 554 639 1.97E-22 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 SUPERFAMILY SSF54211 289 487 1.87E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 SUPERFAMILY SSF54211 5 142 2.23E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Pfam PF00013 KH domain 556 612 3.4E-9 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 SUPERFAMILY SSF55666 143 233 3.27E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 PIRSF PIRSF005499 1 706 1.1E-299 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Pfam PF00575 S1 RNA binding domain 617 689 3.2E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 SUPERFAMILY SSF55666 449 547 6.31E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_1534 ac9b2aa0865c24b5453cdb20990608d6 706 Gene3D G3DSA:3.30.230.70 231 548 1.1E-115 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_1977 7365f31c7f9b00bf146a761ef7b7f6f4 64 SUPERFAMILY SSF143034 2 64 4.58E-24 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1977 7365f31c7f9b00bf146a761ef7b7f6f4 64 Gene3D G3DSA:2.40.50.530 1 64 1.0E-25 T 11-10-2018 Clos_1977 7365f31c7f9b00bf146a761ef7b7f6f4 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.98 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Clos_1977 7365f31c7f9b00bf146a761ef7b7f6f4 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1977 7365f31c7f9b00bf146a761ef7b7f6f4 64 Pfam PF01632 Ribosomal protein L35 2 62 6.0E-27 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1977 7365f31c7f9b00bf146a761ef7b7f6f4 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.1E-29 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Clos_1977 7365f31c7f9b00bf146a761ef7b7f6f4 64 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.8E-23 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Clos_1977 7365f31c7f9b00bf146a761ef7b7f6f4 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.8E-23 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Clos_1977 7365f31c7f9b00bf146a761ef7b7f6f4 64 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.8E-23 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Clos_2172 7c362c22335645804567b3460b547046 571 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 91 263 6.5E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_2172 7c362c22335645804567b3460b547046 571 Gene3D G3DSA:3.30.230.10 344 550 4.6E-50 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_2172 7c362c22335645804567b3460b547046 571 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 95 114 2.9E-31 T 11-10-2018 Clos_2172 7c362c22335645804567b3460b547046 571 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 440 459 2.9E-31 T 11-10-2018 Clos_2172 7c362c22335645804567b3460b547046 571 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 470 489 2.9E-31 T 11-10-2018 Clos_2172 7c362c22335645804567b3460b547046 571 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 493 511 2.9E-31 T 11-10-2018 Clos_2172 7c362c22335645804567b3460b547046 571 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 4 531 1.7E-258 T 11-10-2018 IPR014251 Sporulation protease LonB Clos_2172 7c362c22335645804567b3460b547046 571 SMART SM00382 87 265 2.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2172 7c362c22335645804567b3460b547046 571 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 443 451 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Clos_2172 7c362c22335645804567b3460b547046 571 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 344 514 1.5E-28 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Clos_2172 7c362c22335645804567b3460b547046 571 SUPERFAMILY SSF52540 53 326 4.71E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2172 7c362c22335645804567b3460b547046 571 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 171 186 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_2172 7c362c22335645804567b3460b547046 571 SUPERFAMILY SSF54211 349 532 3.57E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_2172 7c362c22335645804567b3460b547046 571 Gene3D G3DSA:3.40.50.300 50 261 1.8E-33 T 11-10-2018 Clos_0475 14651876552fbae995a2314c8a50602d 213 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 208 1.4E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_0475 14651876552fbae995a2314c8a50602d 213 PIRSF PIRSF002939 3 213 3.0E-109 T 11-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 Clos_0475 14651876552fbae995a2314c8a50602d 213 Pfam PF08281 Sigma-70, region 4 168 204 1.8E-7 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_0475 14651876552fbae995a2314c8a50602d 213 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 15 209 9.4E-113 T 11-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_0475 14651876552fbae995a2314c8a50602d 213 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 59 72 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_0475 14651876552fbae995a2314c8a50602d 213 Pfam PF04542 Sigma-70 region 2 35 104 6.4E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0475 14651876552fbae995a2314c8a50602d 213 SUPERFAMILY SSF88946 17 104 1.83E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0475 14651876552fbae995a2314c8a50602d 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_0475 14651876552fbae995a2314c8a50602d 213 SUPERFAMILY SSF88659 122 210 8.89E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_2871 eb418774506347032b2b135aa4f97e0c 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 7 624 41.849 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 Gene3D G3DSA:1.10.10.1800 460 550 1.4E-19 T 11-10-2018 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 Pfam PF01134 Glucose inhibited division protein A 10 399 1.1E-165 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 Pfam PF13932 GidA associated domain 402 616 1.8E-78 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 SMART SM01228 546 617 8.0E-43 T 11-10-2018 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 9 622 2.7E-269 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 Gene3D G3DSA:1.10.150.570 569 621 2.7E-23 T 11-10-2018 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 1.0E-5 T 11-10-2018 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.0E-5 T 11-10-2018 Clos_2871 eb418774506347032b2b135aa4f97e0c 630 Gene3D G3DSA:3.50.50.60 2 235 8.6E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2871 eb418774506347032b2b135aa4f97e0c 630 Gene3D G3DSA:3.50.50.60 301 459 3.5E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2871 eb418774506347032b2b135aa4f97e0c 630 SUPERFAMILY SSF51905 8 262 1.36E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2612 8542ab98188a851ba203e97ba8e6f2db 406 Gene3D G3DSA:2.40.50.100 67 253 1.6E-66 T 11-10-2018 Clos_2612 8542ab98188a851ba203e97ba8e6f2db 406 Gene3D G3DSA:2.40.30.170 57 329 1.6E-66 T 11-10-2018 Clos_2612 8542ab98188a851ba203e97ba8e6f2db 406 Gene3D G3DSA:1.10.287.470 101 218 1.6E-66 T 11-10-2018 Clos_2612 8542ab98188a851ba203e97ba8e6f2db 406 Gene3D G3DSA:2.40.420.20 330 388 1.6E-66 T 11-10-2018 Clos_2612 8542ab98188a851ba203e97ba8e6f2db 406 SUPERFAMILY SSF111369 57 326 7.85E-24 T 11-10-2018 Clos_2612 8542ab98188a851ba203e97ba8e6f2db 406 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 185 402 1.5E-46 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Clos_2612 8542ab98188a851ba203e97ba8e6f2db 406 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 320 1.1E-29 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 PIRSF PIRSF000429 1 392 4.1E-132 T 11-10-2018 IPR002155 Thiolase GO:0016747 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 Gene3D G3DSA:3.40.47.10 6 275 1.6E-157 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.1E-108 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 SUPERFAMILY SSF53901 270 391 2.41E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 Gene3D G3DSA:3.40.47.10 126 388 1.6E-157 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 SUPERFAMILY SSF53901 3 269 1.2E-94 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 1.3E-145 T 11-10-2018 IPR002155 Thiolase GO:0016747 Clos_0258 0ebacf81649bac8a0febb9abf4860197 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 5.8E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Clos_1312 e1e4f68dcc9b95f0cb9eb46c0d8e09b1 495 Gene3D G3DSA:3.30.1870.10 111 186 2.4E-98 T 11-10-2018 Clos_1312 e1e4f68dcc9b95f0cb9eb46c0d8e09b1 495 Gene3D G3DSA:1.20.1440.30 187 303 2.4E-98 T 11-10-2018 Clos_1312 e1e4f68dcc9b95f0cb9eb46c0d8e09b1 495 Pfam PF05139 Erythromycin esterase 109 442 8.0E-75 T 11-10-2018 IPR007815 Erythromycin esterase GO:0046677 Clos_1312 e1e4f68dcc9b95f0cb9eb46c0d8e09b1 495 PIRSF PIRSF036794 43 225 1.6E-42 T 11-10-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type Clos_1312 e1e4f68dcc9b95f0cb9eb46c0d8e09b1 495 PIRSF PIRSF036794 227 452 7.6E-20 T 11-10-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type Clos_1312 e1e4f68dcc9b95f0cb9eb46c0d8e09b1 495 SUPERFAMILY SSF159501 53 446 1.1E-105 T 11-10-2018 Clos_1312 e1e4f68dcc9b95f0cb9eb46c0d8e09b1 495 Gene3D G3DSA:3.40.1660.10 53 442 2.4E-98 T 11-10-2018 Clos_1897 1d44bedc80faa7ef7746ade69a6a3a15 423 SUPERFAMILY SSF53335 3 417 6.39E-80 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1897 1d44bedc80faa7ef7746ade69a6a3a15 423 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 46 1.2E-7 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1897 1d44bedc80faa7ef7746ade69a6a3a15 423 Pfam PF00145 C-5 cytosine-specific DNA methylase 115 413 3.6E-53 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1897 1d44bedc80faa7ef7746ade69a6a3a15 423 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 6 413 6.3E-52 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1897 1d44bedc80faa7ef7746ade69a6a3a15 423 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 211 224 1.4E-15 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1897 1d44bedc80faa7ef7746ade69a6a3a15 423 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 165 179 1.4E-15 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1897 1d44bedc80faa7ef7746ade69a6a3a15 423 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 1.4E-15 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1897 1d44bedc80faa7ef7746ade69a6a3a15 423 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 122 134 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 Gene3D G3DSA:3.40.190.10 134 343 7.8E-122 T 11-10-2018 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 168 187 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 150 164 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 294 320 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 205 224 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 249 268 3.2E-53 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 SUPERFAMILY SSF53850 29 346 5.22E-95 T 11-10-2018 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 Pfam PF13416 Bacterial extracellular solute-binding protein 45 302 1.3E-36 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 Gene3D G3DSA:3.40.190.10 32 318 7.8E-122 T 11-10-2018 Clos_2537 1dfb05e369b2d4a45574ce4b889f5460 348 PIRSF PIRSF019574 4 348 2.0E-125 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 Clos_0554 9204e6d838ecdecd0530403457f980ea 714 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 533 707 1.1E-49 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_0554 9204e6d838ecdecd0530403457f980ea 714 Gene3D G3DSA:3.40.630.40 529 714 1.0E-60 T 11-10-2018 Clos_0554 9204e6d838ecdecd0530403457f980ea 714 Pfam PF11741 AMIN domain 203 305 1.4E-20 T 11-10-2018 IPR021731 AMIN domain Clos_0554 9204e6d838ecdecd0530403457f980ea 714 Pfam PF11741 AMIN domain 322 415 8.7E-8 T 11-10-2018 IPR021731 AMIN domain Clos_0554 9204e6d838ecdecd0530403457f980ea 714 SUPERFAMILY SSF55383 70 164 3.92E-18 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_0554 9204e6d838ecdecd0530403457f980ea 714 Pfam PF07833 Copper amine oxidase N-terminal domain 68 169 4.0E-27 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Clos_0554 9204e6d838ecdecd0530403457f980ea 714 Gene3D G3DSA:3.30.457.10 72 155 1.7E-13 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_0554 9204e6d838ecdecd0530403457f980ea 714 SMART SM00646 597 707 2.1E-45 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_0554 9204e6d838ecdecd0530403457f980ea 714 Gene3D G3DSA:2.60.40.3500 304 419 1.5E-16 T 11-10-2018 Clos_0554 9204e6d838ecdecd0530403457f980ea 714 Gene3D G3DSA:2.60.40.3500 185 303 1.4E-23 T 11-10-2018 Clos_0554 9204e6d838ecdecd0530403457f980ea 714 SUPERFAMILY SSF53187 531 711 5.02E-54 T 11-10-2018 Clos_1437 ebca966921f0c68a2d509a7dfb7e4919 211 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 18 126 2.7E-26 T 11-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Clos_1437 ebca966921f0c68a2d509a7dfb7e4919 211 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 207 1.7E-56 T 11-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Clos_1437 ebca966921f0c68a2d509a7dfb7e4919 211 SMART SM00983 146 205 2.3E-20 T 11-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Clos_1437 ebca966921f0c68a2d509a7dfb7e4919 211 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 146 204 3.7E-17 T 11-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Clos_1437 ebca966921f0c68a2d509a7dfb7e4919 211 SUPERFAMILY SSF63999 3 130 3.01E-32 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Clos_1437 ebca966921f0c68a2d509a7dfb7e4919 211 Gene3D G3DSA:3.40.50.10240 1 211 1.4E-63 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Clos_1437 ebca966921f0c68a2d509a7dfb7e4919 211 SUPERFAMILY SSF63862 126 210 4.71E-14 T 11-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Clos_2629 e662fda0db0a2c9540d07a7461f89079 801 Gene3D G3DSA:3.60.40.10 581 800 4.7E-41 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2629 e662fda0db0a2c9540d07a7461f89079 801 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 41 798 2.8E-223 T 11-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2629 e662fda0db0a2c9540d07a7461f89079 801 SMART SM00331 586 797 9.3E-24 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2629 e662fda0db0a2c9540d07a7461f89079 801 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 614 797 5.1E-28 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2629 e662fda0db0a2c9540d07a7461f89079 801 SUPERFAMILY SSF81606 598 796 9.94E-18 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 365 3.0E-98 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 PIRSF PIRSF000804 1 366 6.8E-120 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 SUPERFAMILY SSF55979 1 116 1.12E-27 T 11-10-2018 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 SUPERFAMILY SSF55979 244 365 4.4E-34 T 11-10-2018 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 3.5E-30 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 364 5.3E-28 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 SMART SM00480 17 361 2.5E-119 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 Pfam PF02767 DNA polymerase III beta subunit, central domain 128 240 4.7E-31 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 Gene3D G3DSA:3.70.10.10 137 363 7.8E-124 T 11-10-2018 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 Gene3D G3DSA:3.10.150.10 1 241 7.8E-124 T 11-10-2018 Clos_0002 e389de6cfd0fc591cf041837c142b157 368 SUPERFAMILY SSF55979 128 243 1.0E-25 T 11-10-2018 Clos_0843 898cc610fc9a8c03bb5de4a82bca3f35 199 Pfam PF03167 Uracil DNA glycosylase superfamily 36 186 3.5E-27 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_0843 898cc610fc9a8c03bb5de4a82bca3f35 199 SUPERFAMILY SSF52141 12 197 3.11E-41 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_0843 898cc610fc9a8c03bb5de4a82bca3f35 199 SMART SM00987 34 187 2.1E-17 T 11-10-2018 Clos_0843 898cc610fc9a8c03bb5de4a82bca3f35 199 SMART SM00986 34 187 2.1E-17 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_0843 898cc610fc9a8c03bb5de4a82bca3f35 199 Gene3D G3DSA:3.40.470.10 6 199 4.9E-52 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_1528 21312f626e424c9f5b26d0a672137416 719 Gene3D G3DSA:3.40.50.300 218 392 6.2E-74 T 11-10-2018 Clos_1528 21312f626e424c9f5b26d0a672137416 719 Gene3D G3DSA:3.40.50.10050 515 622 6.5E-41 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Clos_1528 21312f626e424c9f5b26d0a672137416 719 Pfam PF11987 Translation-initiation factor 2 507 611 1.4E-39 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Clos_1528 21312f626e424c9f5b26d0a672137416 719 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 136 719 1.1E-259 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Clos_1528 21312f626e424c9f5b26d0a672137416 719 SUPERFAMILY SSF50447 393 476 8.84E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_1528 21312f626e424c9f5b26d0a672137416 719 Gene3D G3DSA:1.10.10.2480 1 66 1.7E-21 T 11-10-2018 Clos_1528 21312f626e424c9f5b26d0a672137416 719 Gene3D G3DSA:2.40.30.10 623 719 3.4E-33 T 11-10-2018 Clos_1528 21312f626e424c9f5b26d0a672137416 719 SUPERFAMILY SSF50447 624 718 1.5E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_1528 21312f626e424c9f5b26d0a672137416 719 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 719 17.243 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Clos_1528 21312f626e424c9f5b26d0a672137416 719 Gene3D G3DSA:2.40.30.10 393 509 2.1E-39 T 11-10-2018 Clos_1528 21312f626e424c9f5b26d0a672137416 719 SUPERFAMILY SSF52156 500 628 5.62E-38 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Clos_1528 21312f626e424c9f5b26d0a672137416 719 Pfam PF00009 Elongation factor Tu GTP binding domain 225 381 3.7E-36 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1528 21312f626e424c9f5b26d0a672137416 719 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 143 193 4.6E-14 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Clos_1528 21312f626e424c9f5b26d0a672137416 719 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 50 3.4E-15 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Clos_1528 21312f626e424c9f5b26d0a672137416 719 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 380 1.5E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_1528 21312f626e424c9f5b26d0a672137416 719 ProSitePatterns PS01176 Initiation factor 2 signature. 672 694 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Clos_1528 21312f626e424c9f5b26d0a672137416 719 SUPERFAMILY SSF52540 204 393 8.14E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1154 a006ff2185a0777d6116f2f0edc127be 205 SUPERFAMILY SSF53254 3 202 1.14E-60 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Clos_1154 a006ff2185a0777d6116f2f0edc127be 205 SMART SM00855 3 157 2.5E-21 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Clos_1154 a006ff2185a0777d6116f2f0edc127be 205 PIRSF PIRSF000709 2 197 4.5E-24 T 11-10-2018 Clos_1154 a006ff2185a0777d6116f2f0edc127be 205 Gene3D G3DSA:3.40.50.1240 2 204 1.1E-69 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Clos_1154 a006ff2185a0777d6116f2f0edc127be 205 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Clos_1154 a006ff2185a0777d6116f2f0edc127be 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 197 2.7E-60 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Clos_1752 32a40ab427f30435f0dd43c053098706 110 Gene3D G3DSA:3.30.70.1490 1 109 5.5E-34 T 11-10-2018 IPR036764 Cysteine protease Prp superfamily Clos_1752 32a40ab427f30435f0dd43c053098706 110 SUPERFAMILY SSF118010 1 109 1.29E-33 T 11-10-2018 IPR036764 Cysteine protease Prp superfamily Clos_1752 32a40ab427f30435f0dd43c053098706 110 Pfam PF04327 Cysteine protease Prp 1 103 1.8E-27 T 11-10-2018 IPR007422 Cysteine protease Prp Clos_1417 effca51e252043513d8116a8f5df5c77 308 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1417 effca51e252043513d8116a8f5df5c77 308 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 302 6.2E-101 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1417 effca51e252043513d8116a8f5df5c77 308 SUPERFAMILY SSF55174 14 101 1.23E-13 T 11-10-2018 Clos_1417 effca51e252043513d8116a8f5df5c77 308 SUPERFAMILY SSF55120 74 304 1.4E-77 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1417 effca51e252043513d8116a8f5df5c77 308 Gene3D G3DSA:3.10.290.10 3 71 1.2E-18 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_1417 effca51e252043513d8116a8f5df5c77 308 Pfam PF01479 S4 domain 16 61 5.3E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1417 effca51e252043513d8116a8f5df5c77 308 Pfam PF00849 RNA pseudouridylate synthase 88 242 1.9E-36 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1417 effca51e252043513d8116a8f5df5c77 308 Gene3D G3DSA:3.30.2350.10 80 305 9.0E-74 T 11-10-2018 Clos_1417 effca51e252043513d8116a8f5df5c77 308 SMART SM00363 15 79 1.1E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_2385 a48ca2447693d681dfc157af463d8d29 98 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Clos_2385 a48ca2447693d681dfc157af463d8d29 98 SMART SM00877 4 80 4.1E-36 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2385 a48ca2447693d681dfc157af463d8d29 98 Pfam PF00936 BMC domain 5 80 1.5E-28 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2385 a48ca2447693d681dfc157af463d8d29 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 1.0E-17 T 11-10-2018 Clos_2385 a48ca2447693d681dfc157af463d8d29 98 Gene3D G3DSA:3.30.70.1710 1 98 2.3E-40 T 11-10-2018 Clos_2385 a48ca2447693d681dfc157af463d8d29 98 SUPERFAMILY SSF143414 3 95 5.1E-32 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 3 96 4.6E-28 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 361 383 6.7E-18 T 11-10-2018 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 256 6.7E-18 T 11-10-2018 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 333 349 6.7E-18 T 11-10-2018 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 130 6.7E-18 T 11-10-2018 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 Gene3D G3DSA:1.10.1060.10 2 106 2.5E-30 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 SUPERFAMILY SSF46548 8 119 7.85E-22 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 SUPERFAMILY SSF51971 110 340 5.89E-55 T 11-10-2018 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 371 389 7.0E-13 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 335 356 7.0E-13 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 258 7.0E-13 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 132 7.0E-13 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 SUPERFAMILY SSF51971 306 394 9.89E-6 T 11-10-2018 Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 Gene3D G3DSA:3.50.50.60 107 227 2.4E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 Gene3D G3DSA:3.50.50.60 234 417 1.5E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0064 50979bc49c683e247c6f0e31722b64dd 417 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 111 394 6.3E-29 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_0545 fe17688630a9f257f9a593606082eb2a 410 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 68 404 1.0E-84 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Clos_0545 fe17688630a9f257f9a593606082eb2a 410 SUPERFAMILY SSF55021 337 406 1.86E-10 T 11-10-2018 Clos_0545 fe17688630a9f257f9a593606082eb2a 410 Pfam PF13840 ACT domain 340 401 8.9E-14 T 11-10-2018 IPR027795 CASTOR, ACT domain Clos_0545 fe17688630a9f257f9a593606082eb2a 410 Gene3D G3DSA:3.30.2130.10 258 410 1.1E-23 T 11-10-2018 Clos_0545 fe17688630a9f257f9a593606082eb2a 410 Gene3D G3DSA:3.40.1160.10 1 257 1.6E-81 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Clos_0545 fe17688630a9f257f9a593606082eb2a 410 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Clos_0545 fe17688630a9f257f9a593606082eb2a 410 SUPERFAMILY SSF53633 2 247 3.53E-67 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Clos_0545 fe17688630a9f257f9a593606082eb2a 410 PIRSF PIRSF000726 50 410 1.8E-80 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Clos_0545 fe17688630a9f257f9a593606082eb2a 410 PIRSF PIRSF000726 1 63 1.6E-10 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Clos_0545 fe17688630a9f257f9a593606082eb2a 410 SUPERFAMILY SSF55021 264 349 1.31E-7 T 11-10-2018 Clos_0545 fe17688630a9f257f9a593606082eb2a 410 Pfam PF00696 Amino acid kinase family 2 234 8.4E-49 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Clos_0793 618c4ed82f6ba384fffc4c50aae4e683 193 Gene3D G3DSA:1.20.1200.10 12 192 4.8E-57 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_0793 618c4ed82f6ba384fffc4c50aae4e683 193 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 176 3.0E-49 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_0793 618c4ed82f6ba384fffc4c50aae4e683 193 Pfam PF01923 Cobalamin adenosyltransferase 3 164 5.4E-53 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_0793 618c4ed82f6ba384fffc4c50aae4e683 193 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 177 1.6E-61 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_0793 618c4ed82f6ba384fffc4c50aae4e683 193 SUPERFAMILY SSF89028 2 177 2.94E-59 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 Gene3D G3DSA:2.60.120.10 2 148 1.8E-42 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 SUPERFAMILY SSF46785 151 228 8.35E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 ProSitePatterns PS00042 Crp-type HTH domain signature. 180 203 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 SMART SM00100 15 133 1.1E-26 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 Pfam PF13545 Crp-like helix-turn-helix domain 154 226 9.9E-19 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 Pfam PF00027 Cyclic nucleotide-binding domain 34 121 1.5E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 SMART SM00419 172 220 4.7E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 178 194 1.1E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 209 1.1E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 SUPERFAMILY SSF51206 9 147 2.88E-37 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Clos_2132 83ddeaa9187e295e9b17d274a1a2410e 229 Gene3D G3DSA:1.10.10.10 149 229 2.7E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2452 33162fa8589b8010a54c9ca0db3e6be7 236 SUPERFAMILY SSF144010 24 235 3.66E-28 T 11-10-2018 Clos_2452 33162fa8589b8010a54c9ca0db3e6be7 236 Gene3D G3DSA:3.90.1660.10 72 167 2.4E-7 T 11-10-2018 Clos_2452 33162fa8589b8010a54c9ca0db3e6be7 236 Gene3D G3DSA:3.30.1330.100 32 184 2.4E-7 T 11-10-2018 Clos_2452 33162fa8589b8010a54c9ca0db3e6be7 236 Pfam PF01996 F420-0:Gamma-glutamyl ligase 29 183 1.6E-10 T 11-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Clos_1420 865c58b5892f64bea048d821b7015dd0 280 SUPERFAMILY SSF54506 3 135 1.67E-39 T 11-10-2018 Clos_1420 865c58b5892f64bea048d821b7015dd0 280 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 65 79 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Clos_1420 865c58b5892f64bea048d821b7015dd0 280 Gene3D G3DSA:3.10.310.10 124 269 8.0E-102 T 11-10-2018 Clos_1420 865c58b5892f64bea048d821b7015dd0 280 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 277 8.5E-90 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Clos_1420 865c58b5892f64bea048d821b7015dd0 280 Gene3D G3DSA:3.10.310.10 5 275 8.0E-102 T 11-10-2018 Clos_1420 865c58b5892f64bea048d821b7015dd0 280 Pfam PF01678 Diaminopimelate epimerase 158 270 2.0E-26 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Clos_1420 865c58b5892f64bea048d821b7015dd0 280 Pfam PF01678 Diaminopimelate epimerase 5 127 4.1E-32 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Clos_1420 865c58b5892f64bea048d821b7015dd0 280 SUPERFAMILY SSF54506 142 276 1.33E-43 T 11-10-2018 Clos_1420 865c58b5892f64bea048d821b7015dd0 280 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 279 37.763 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Clos_1988 dbd82dea72a0a660689536f6e66e005e 97 Pfam PF01527 Transposase 1 77 1.6E-12 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Clos_1988 dbd82dea72a0a660689536f6e66e005e 97 Gene3D G3DSA:1.10.10.60 8 89 3.8E-14 T 11-10-2018 Clos_1988 dbd82dea72a0a660689536f6e66e005e 97 SUPERFAMILY SSF46689 4 96 2.69E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2000 dbd82dea72a0a660689536f6e66e005e 97 Pfam PF01527 Transposase 1 77 1.6E-12 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Clos_2000 dbd82dea72a0a660689536f6e66e005e 97 Gene3D G3DSA:1.10.10.60 8 89 3.8E-14 T 11-10-2018 Clos_2000 dbd82dea72a0a660689536f6e66e005e 97 SUPERFAMILY SSF46689 4 96 2.69E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2233 dbd82dea72a0a660689536f6e66e005e 97 Pfam PF01527 Transposase 1 77 1.6E-12 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Clos_2233 dbd82dea72a0a660689536f6e66e005e 97 Gene3D G3DSA:1.10.10.60 8 89 3.8E-14 T 11-10-2018 Clos_2233 dbd82dea72a0a660689536f6e66e005e 97 SUPERFAMILY SSF46689 4 96 2.69E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_1894 dbd82dea72a0a660689536f6e66e005e 97 Pfam PF01527 Transposase 1 77 1.6E-12 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Clos_1894 dbd82dea72a0a660689536f6e66e005e 97 Gene3D G3DSA:1.10.10.60 8 89 3.8E-14 T 11-10-2018 Clos_1894 dbd82dea72a0a660689536f6e66e005e 97 SUPERFAMILY SSF46689 4 96 2.69E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0638 10a59ffefe019c5f7e0d9b0232946bd7 334 Gene3D G3DSA:3.40.50.620 5 206 2.5E-83 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0638 10a59ffefe019c5f7e0d9b0232946bd7 334 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 273 299 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Clos_0638 10a59ffefe019c5f7e0d9b0232946bd7 334 Pfam PF01012 Electron transfer flavoprotein domain 9 187 4.0E-52 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0638 10a59ffefe019c5f7e0d9b0232946bd7 334 Gene3D G3DSA:3.40.50.1220 207 334 1.8E-53 T 11-10-2018 Clos_0638 10a59ffefe019c5f7e0d9b0232946bd7 334 SUPERFAMILY SSF52402 7 203 2.51E-58 T 11-10-2018 Clos_0638 10a59ffefe019c5f7e0d9b0232946bd7 334 SMART SM00893 9 198 4.4E-61 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0638 10a59ffefe019c5f7e0d9b0232946bd7 334 SUPERFAMILY SSF52467 209 328 2.58E-45 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clos_0638 10a59ffefe019c5f7e0d9b0232946bd7 334 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 210 292 2.8E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Clos_0638 10a59ffefe019c5f7e0d9b0232946bd7 334 PIRSF PIRSF000089 5 334 4.7E-118 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Clos_1379 27b54f3eaa8bdca9cb1f1406f4792992 366 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 363 32.138 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_1379 27b54f3eaa8bdca9cb1f1406f4792992 366 Gene3D G3DSA:3.40.50.2000 4 353 4.2E-109 T 11-10-2018 Clos_1379 27b54f3eaa8bdca9cb1f1406f4792992 366 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 142 7.3E-41 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_1379 27b54f3eaa8bdca9cb1f1406f4792992 366 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 190 355 3.9E-36 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Clos_1379 27b54f3eaa8bdca9cb1f1406f4792992 366 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 357 4.4E-90 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_1379 27b54f3eaa8bdca9cb1f1406f4792992 366 Gene3D G3DSA:3.40.50.2000 165 347 4.2E-109 T 11-10-2018 Clos_1379 27b54f3eaa8bdca9cb1f1406f4792992 366 SUPERFAMILY SSF53756 1 363 3.62E-104 T 11-10-2018 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 SUPERFAMILY SSF64586 408 480 1.67E-22 T 11-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 150 161 4.4E-11 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 4.4E-11 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 111 122 4.4E-11 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 PRINTS PR01046 Prolyl-tRNA synthetase signature 141 149 4.4E-11 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 Gene3D G3DSA:3.30.110.30 407 480 7.4E-25 T 11-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 413 480 1.7E-23 T 11-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 SUPERFAMILY SSF55681 18 280 3.4E-81 T 11-10-2018 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 Gene3D G3DSA:3.30.930.10 8 287 7.0E-108 T 11-10-2018 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 Hamap MF_01571 Proline--tRNA ligase [proS]. 12 480 45.928 T 11-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 Pfam PF03129 Anticodon binding domain 294 386 4.0E-22 T 11-10-2018 IPR004154 Anticodon-binding Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 Gene3D G3DSA:3.40.50.800 288 404 1.9E-40 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 SUPERFAMILY SSF52954 283 405 7.7E-36 T 11-10-2018 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 106 275 3.4E-21 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 SMART SM00946 413 480 5.3E-31 T 11-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Clos_0465 633b2ef11a0ad027faf8f4403634907e 480 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 15 480 5.4E-189 T 11-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 Clos_2409 b4f2aa2cfc65d8c53ce2c2def6e98787 248 Gene3D G3DSA:3.40.50.970 63 237 2.5E-23 T 11-10-2018 Clos_2409 b4f2aa2cfc65d8c53ce2c2def6e98787 248 SUPERFAMILY SSF52518 15 236 5.89E-58 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_2409 b4f2aa2cfc65d8c53ce2c2def6e98787 248 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 209 2.7E-24 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Clos_1932 5195517d35edf2e854740fe0d5dff8c1 183 Pfam PF00583 Acetyltransferase (GNAT) family 40 148 3.1E-8 T 11-10-2018 IPR000182 GNAT domain Clos_1932 5195517d35edf2e854740fe0d5dff8c1 183 Gene3D G3DSA:3.40.630.30 30 169 2.7E-12 T 11-10-2018 Clos_1932 5195517d35edf2e854740fe0d5dff8c1 183 SUPERFAMILY SSF55729 37 165 4.95E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0657 5dc2a55ab8d766a6f1b7b4ae78ee5b87 230 SUPERFAMILY SSF54913 13 107 1.02E-13 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Clos_0657 5dc2a55ab8d766a6f1b7b4ae78ee5b87 230 SUPERFAMILY SSF54913 125 221 2.73E-19 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Clos_0657 5dc2a55ab8d766a6f1b7b4ae78ee5b87 230 Pfam PF00543 Nitrogen regulatory protein P-II 138 220 1.9E-6 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Clos_0657 5dc2a55ab8d766a6f1b7b4ae78ee5b87 230 Gene3D G3DSA:3.30.70.120 9 118 2.3E-10 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clos_0657 5dc2a55ab8d766a6f1b7b4ae78ee5b87 230 Gene3D G3DSA:3.30.70.120 124 222 2.1E-19 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clos_0734 4e9ad83d59e6a7c89cc613794c5203c9 239 SUPERFAMILY SSF52540 69 223 4.44E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0734 4e9ad83d59e6a7c89cc613794c5203c9 239 PIRSF PIRSF003073 1 239 5.5E-67 T 11-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clos_0734 4e9ad83d59e6a7c89cc613794c5203c9 239 SMART SM00382 92 224 2.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0734 4e9ad83d59e6a7c89cc613794c5203c9 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 93 113 3.4E-5 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_0734 4e9ad83d59e6a7c89cc613794c5203c9 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 123 137 3.4E-5 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_0734 4e9ad83d59e6a7c89cc613794c5203c9 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 155 169 3.4E-5 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_0734 4e9ad83d59e6a7c89cc613794c5203c9 239 Gene3D G3DSA:3.40.50.300 55 237 2.2E-47 T 11-10-2018 Clos_0734 4e9ad83d59e6a7c89cc613794c5203c9 239 Pfam PF01695 IstB-like ATP binding protein 51 223 4.4E-58 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 164 267 3.8E-46 T 11-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 Pfam PF00072 Response regulator receiver domain 7 120 2.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 SMART SM00448 5 120 6.1E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 PIRSF PIRSF002937 1 274 6.1E-133 T 11-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 SUPERFAMILY SSF52172 3 132 2.13E-35 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 SUPERFAMILY SSF46894 156 271 3.66E-48 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 4 274 6.0E-128 T 11-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 Gene3D G3DSA:1.10.10.10 155 274 4.8E-53 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 Gene3D G3DSA:3.40.50.2300 2 137 2.4E-35 T 11-10-2018 Clos_1602 1e994b6de6e42f35b3c5b8c15719dcd5 274 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 164 272 8.0E-54 T 11-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 Clos_1831 7e8abfd7b230b5e1b9baa42d2efb4f69 598 Gene3D G3DSA:3.80.30.20 175 366 1.6E-21 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Clos_1831 7e8abfd7b230b5e1b9baa42d2efb4f69 598 Gene3D G3DSA:3.40.50.280 16 139 1.3E-11 T 11-10-2018 Clos_1831 7e8abfd7b230b5e1b9baa42d2efb4f69 598 Pfam PF04055 Radical SAM superfamily 182 341 2.8E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1831 7e8abfd7b230b5e1b9baa42d2efb4f69 598 Pfam PF13311 Protein of unknown function (DUF4080) 371 556 4.8E-59 T 11-10-2018 IPR025288 Domain of unknown function DUF4080 Clos_1831 7e8abfd7b230b5e1b9baa42d2efb4f69 598 SUPERFAMILY SSF102114 161 383 8.37E-44 T 11-10-2018 Clos_1831 7e8abfd7b230b5e1b9baa42d2efb4f69 598 SUPERFAMILY SSF52242 42 137 2.28E-6 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_1831 7e8abfd7b230b5e1b9baa42d2efb4f69 598 Pfam PF02310 B12 binding domain 11 126 1.0E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_1831 7e8abfd7b230b5e1b9baa42d2efb4f69 598 SMART SM00729 177 389 1.8E-28 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_1470 815590a6fc506a78339badcf1ee317d7 203 Pfam PF01351 Ribonuclease HII 21 200 3.9E-33 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain Clos_1470 815590a6fc506a78339badcf1ee317d7 203 Gene3D G3DSA:3.30.420.10 3 203 4.1E-73 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_1470 815590a6fc506a78339badcf1ee317d7 203 SUPERFAMILY SSF53098 7 198 6.98E-60 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_1470 815590a6fc506a78339badcf1ee317d7 203 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 201 32.613 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 Clos_0328 eeb0720649d8e9d258d5bb2259ba68fb 188 TIGRFAM TIGR00277 HDIG: HDIG domain 18 87 4.6E-7 T 11-10-2018 IPR006675 HDIG domain Clos_0328 eeb0720649d8e9d258d5bb2259ba68fb 188 SUPERFAMILY SSF109604 4 113 4.71E-10 T 11-10-2018 Clos_0328 eeb0720649d8e9d258d5bb2259ba68fb 188 Gene3D G3DSA:1.10.3210.10 1 142 4.4E-7 T 11-10-2018 Clos_2590 069e6eff364982ad154586dc8b5ec5eb 65 Pfam PF01197 Ribosomal protein L31 1 64 5.8E-33 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2590 069e6eff364982ad154586dc8b5ec5eb 65 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.4E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2590 069e6eff364982ad154586dc8b5ec5eb 65 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2590 069e6eff364982ad154586dc8b5ec5eb 65 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.4E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2590 069e6eff364982ad154586dc8b5ec5eb 65 SUPERFAMILY SSF143800 1 65 5.49E-27 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2590 069e6eff364982ad154586dc8b5ec5eb 65 Gene3D G3DSA:2.30.170.50 1 65 8.4E-33 T 11-10-2018 Clos_2590 069e6eff364982ad154586dc8b5ec5eb 65 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 65 27.332 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2590 069e6eff364982ad154586dc8b5ec5eb 65 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.4E-32 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2590 069e6eff364982ad154586dc8b5ec5eb 65 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 Pfam PF02272 DHHA1 domain 739 874 3.8E-25 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 Gene3D G3DSA:3.30.54.20 626 679 1.2E-50 T 11-10-2018 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 8.5E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 SUPERFAMILY SSF55681 5 243 3.81E-96 T 11-10-2018 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 SUPERFAMILY SSF50447 456 554 4.21E-20 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 Gene3D G3DSA:3.10.310.40 766 875 1.6E-37 T 11-10-2018 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 Gene3D G3DSA:3.30.980.10 564 699 1.2E-50 T 11-10-2018 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 Gene3D G3DSA:2.40.30.130 468 554 1.3E-13 T 11-10-2018 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 SUPERFAMILY SSF55186 554 713 2.22E-50 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 180.215 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 1.8E-27 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 1.8E-27 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 197 208 1.8E-27 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 1.8E-27 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 224 237 1.8E-27 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 SUPERFAMILY SSF101353 244 457 7.19E-65 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 Gene3D G3DSA:3.30.930.10 4 240 1.1E-101 T 11-10-2018 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 Pfam PF01411 tRNA synthetases class II (A) 8 555 4.2E-201 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Clos_1666 373fc6ea437e4e7ab9db4c3e94455a33 880 SMART SM00863 655 698 2.8E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 178 316 7.3E-33 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 Pfam PF00994 Probable molybdopterin binding domain 182 318 2.1E-27 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 169 9.3E-42 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 Gene3D G3DSA:3.90.105.10 24 176 5.6E-126 T 11-10-2018 Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 SUPERFAMILY SSF53218 179 326 8.51E-42 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 SMART SM00852 182 320 2.3E-42 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 SUPERFAMILY SSF63867 330 404 7.59E-13 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 Gene3D G3DSA:3.40.980.10 177 329 5.6E-126 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 Gene3D G3DSA:2.40.340.10 330 398 5.6E-126 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 Gene3D G3DSA:2.170.190.11 47 143 5.6E-126 T 11-10-2018 Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 SUPERFAMILY SSF63882 5 178 2.49E-53 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1103 2759ddc9124e169c39b3922baa952aaf 410 Pfam PF03454 MoeA C-terminal region (domain IV) 334 404 2.3E-9 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1817 fe36e658d7d29070df9e7afde4481c23 678 Pfam PF13361 UvrD-like helicase C-terminal domain 276 599 9.0E-49 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Clos_1817 fe36e658d7d29070df9e7afde4481c23 678 Gene3D G3DSA:3.40.50.300 281 619 1.9E-76 T 11-10-2018 Clos_1817 fe36e658d7d29070df9e7afde4481c23 678 SUPERFAMILY SSF52540 2 617 3.48E-132 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1817 fe36e658d7d29070df9e7afde4481c23 678 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 269 5.5E-57 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Clos_1817 fe36e658d7d29070df9e7afde4481c23 678 Gene3D G3DSA:1.10.10.160 112 189 2.1E-78 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Clos_1817 fe36e658d7d29070df9e7afde4481c23 678 Gene3D G3DSA:1.10.486.10 383 530 1.9E-76 T 11-10-2018 Clos_1817 fe36e658d7d29070df9e7afde4481c23 678 Gene3D G3DSA:3.40.50.300 9 272 2.1E-78 T 11-10-2018 Clos_1099 5a35640b39409790f75f314c2e97321c 364 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 291 302 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_1099 5a35640b39409790f75f314c2e97321c 364 SUPERFAMILY SSF54862 249 351 1.38E-13 T 11-10-2018 Clos_1099 5a35640b39409790f75f314c2e97321c 364 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 258 269 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_1099 5a35640b39409790f75f314c2e97321c 364 Gene3D G3DSA:3.30.70.20 18 98 4.4E-11 T 11-10-2018 Clos_1099 5a35640b39409790f75f314c2e97321c 364 Pfam PF00037 4Fe-4S binding domain 53 74 4.9E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1099 5a35640b39409790f75f314c2e97321c 364 SUPERFAMILY SSF54862 15 78 4.63E-14 T 11-10-2018 Clos_1099 5a35640b39409790f75f314c2e97321c 364 Pfam PF13187 4Fe-4S dicluster domain 258 306 9.8E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1099 5a35640b39409790f75f314c2e97321c 364 Gene3D G3DSA:3.30.70.20 250 309 1.1E-11 T 11-10-2018 Clos_1099 5a35640b39409790f75f314c2e97321c 364 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0290 f512c458abcd325b0e21790bd442cbbb 385 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 217 382 1.7E-33 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Clos_0290 f512c458abcd325b0e21790bd442cbbb 385 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 3 384 2.2E-75 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Clos_0290 f512c458abcd325b0e21790bd442cbbb 385 Gene3D G3DSA:3.30.300.210 232 385 4.7E-32 T 11-10-2018 IPR038501 Spore germination GerAC superfamily Clos_2072 10ad3e2a1dbfef9012eaba3b3544ee7b 228 Pfam PF07486 Cell Wall Hydrolase 128 225 2.0E-29 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 Clos_2072 10ad3e2a1dbfef9012eaba3b3544ee7b 228 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 29 226 1.3E-83 T 11-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 Clos_2072 10ad3e2a1dbfef9012eaba3b3544ee7b 228 Gene3D G3DSA:2.40.10.420 192 227 2.2E-20 T 11-10-2018 Clos_2072 10ad3e2a1dbfef9012eaba3b3544ee7b 228 Gene3D G3DSA:1.10.101.10 23 103 2.2E-22 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Clos_2072 10ad3e2a1dbfef9012eaba3b3544ee7b 228 Gene3D G3DSA:1.10.10.2520 112 191 3.9E-30 T 11-10-2018 Clos_2072 10ad3e2a1dbfef9012eaba3b3544ee7b 228 SUPERFAMILY SSF47090 27 95 3.92E-21 T 11-10-2018 IPR036365 PGBD-like superfamily Clos_2072 10ad3e2a1dbfef9012eaba3b3544ee7b 228 Pfam PF01471 Putative peptidoglycan binding domain 36 92 1.3E-18 T 11-10-2018 IPR002477 Peptidoglycan binding-like Clos_0982 0ecff3a44e5dc1656b7d526da37e152e 225 Pfam PF00072 Response regulator receiver domain 4 113 8.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0982 0ecff3a44e5dc1656b7d526da37e152e 225 SUPERFAMILY SSF46894 126 220 1.42E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_0982 0ecff3a44e5dc1656b7d526da37e152e 225 SMART SM00448 2 112 1.6E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0982 0ecff3a44e5dc1656b7d526da37e152e 225 Gene3D G3DSA:3.40.50.2300 1 125 4.8E-30 T 11-10-2018 Clos_0982 0ecff3a44e5dc1656b7d526da37e152e 225 SMART SM00862 144 219 7.7E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0982 0ecff3a44e5dc1656b7d526da37e152e 225 SUPERFAMILY SSF52172 3 120 2.13E-32 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0982 0ecff3a44e5dc1656b7d526da37e152e 225 Gene3D G3DSA:1.10.10.10 126 224 9.9E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0982 0ecff3a44e5dc1656b7d526da37e152e 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 219 5.1E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0210 52e61818efda194c7aedf846aeacf953 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 178 316 7.5E-33 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_0210 52e61818efda194c7aedf846aeacf953 411 Gene3D G3DSA:2.40.340.10 330 398 2.4E-126 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0210 52e61818efda194c7aedf846aeacf953 411 Gene3D G3DSA:2.170.190.11 47 143 2.4E-126 T 11-10-2018 Clos_0210 52e61818efda194c7aedf846aeacf953 411 Pfam PF00994 Probable molybdopterin binding domain 182 318 1.3E-28 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_0210 52e61818efda194c7aedf846aeacf953 411 SUPERFAMILY SSF63867 332 404 9.03E-11 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0210 52e61818efda194c7aedf846aeacf953 411 SMART SM00852 182 320 1.2E-42 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_0210 52e61818efda194c7aedf846aeacf953 411 SUPERFAMILY SSF53218 179 324 1.05E-40 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_0210 52e61818efda194c7aedf846aeacf953 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 404 2.8E-9 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0210 52e61818efda194c7aedf846aeacf953 411 Gene3D G3DSA:3.40.980.10 177 329 2.4E-126 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_0210 52e61818efda194c7aedf846aeacf953 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 169 3.0E-42 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0210 52e61818efda194c7aedf846aeacf953 411 SUPERFAMILY SSF63882 5 178 1.19E-53 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0210 52e61818efda194c7aedf846aeacf953 411 Gene3D G3DSA:3.90.105.10 25 176 2.4E-126 T 11-10-2018 Clos_1225 f8ee3069f2715fbbb4610bd336317e57 87 Gene3D G3DSA:1.20.58.110 1 86 1.0E-22 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1225 f8ee3069f2715fbbb4610bd336317e57 87 Pfam PF01649 Ribosomal protein S20 2 84 1.1E-22 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1225 f8ee3069f2715fbbb4610bd336317e57 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.813 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1225 f8ee3069f2715fbbb4610bd336317e57 87 SUPERFAMILY SSF46992 3 86 3.92E-24 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1225 f8ee3069f2715fbbb4610bd336317e57 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.1E-23 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1225 f8ee3069f2715fbbb4610bd336317e57 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 16 80 3.0E-22 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0808 270b7672bf19b3f243e91558238526ed 152 Gene3D G3DSA:2.60.120.10 12 152 1.2E-44 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_0808 270b7672bf19b3f243e91558238526ed 152 Pfam PF06249 Ethanolamine utilisation protein EutQ 4 152 5.3E-63 T 11-10-2018 IPR010424 Ethanolamine utilisation EutQ Clos_0808 270b7672bf19b3f243e91558238526ed 152 SUPERFAMILY SSF51182 59 150 4.45E-23 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Clos_1145 597832d8d80700bc36c17de27adb9402 171 Pfam PF13353 4Fe-4S single cluster domain 16 153 9.1E-35 T 11-10-2018 Clos_1145 597832d8d80700bc36c17de27adb9402 171 SUPERFAMILY SSF102114 23 115 4.51E-7 T 11-10-2018 Clos_1145 597832d8d80700bc36c17de27adb9402 171 PIRSF PIRSF000368 1 170 1.0E-49 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 Clos_1145 597832d8d80700bc36c17de27adb9402 171 Pfam PF04055 Radical SAM superfamily 24 116 1.7E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1145 597832d8d80700bc36c17de27adb9402 171 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 8 156 4.5E-45 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 Clos_1145 597832d8d80700bc36c17de27adb9402 171 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Clos_1145 597832d8d80700bc36c17de27adb9402 171 Gene3D G3DSA:3.20.20.70 3 168 4.9E-38 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2667 35d9aeea87285d8f31556d81d637c53f 79 SMART SM00966 8 51 7.2E-9 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Clos_2667 35d9aeea87285d8f31556d81d637c53f 79 SUPERFAMILY SSF89447 2 53 8.11E-16 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily Clos_2667 35d9aeea87285d8f31556d81d637c53f 79 Gene3D G3DSA:2.10.260.10 1 51 1.7E-24 T 11-10-2018 Clos_2667 35d9aeea87285d8f31556d81d637c53f 79 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 1.6E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Clos_2667 35d9aeea87285d8f31556d81d637c53f 79 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 6.1E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Clos_1161 871eee2979b310914e5bd3f7dd3b654f 330 SUPERFAMILY SSF54106 150 191 1.7E-9 T 11-10-2018 Clos_1161 871eee2979b310914e5bd3f7dd3b654f 330 Gene3D G3DSA:3.10.350.10 146 200 2.8E-14 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1161 871eee2979b310914e5bd3f7dd3b654f 330 Gene3D G3DSA:1.10.10.2520 210 293 5.0E-30 T 11-10-2018 Clos_1161 871eee2979b310914e5bd3f7dd3b654f 330 Gene3D G3DSA:2.40.10.420 295 329 1.6E-7 T 11-10-2018 Clos_1161 871eee2979b310914e5bd3f7dd3b654f 330 Pfam PF07486 Cell Wall Hydrolase 226 329 3.7E-27 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 Clos_1161 871eee2979b310914e5bd3f7dd3b654f 330 Pfam PF01476 LysM domain 150 191 1.1E-9 T 11-10-2018 IPR018392 LysM domain Clos_1161 871eee2979b310914e5bd3f7dd3b654f 330 SMART SM00257 149 192 2.1E-9 T 11-10-2018 IPR018392 LysM domain Clos_2740 a09193abf1918fd570fd1524154787a6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 130 146 4.9E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Clos_2740 a09193abf1918fd570fd1524154787a6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 314 335 4.9E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Clos_2740 a09193abf1918fd570fd1524154787a6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 154 167 4.9E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Clos_2740 a09193abf1918fd570fd1524154787a6 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 115 130 4.9E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Clos_2740 a09193abf1918fd570fd1524154787a6 587 Pfam PF05746 DALR anticodon binding domain 470 587 2.3E-28 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Clos_2740 a09193abf1918fd570fd1524154787a6 587 Gene3D G3DSA:3.40.50.620 109 463 2.4E-96 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_2740 a09193abf1918fd570fd1524154787a6 587 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 587 22.679 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Clos_2740 a09193abf1918fd570fd1524154787a6 587 Gene3D G3DSA:1.10.730.10 464 587 9.4E-30 T 11-10-2018 Clos_2740 a09193abf1918fd570fd1524154787a6 587 SUPERFAMILY SSF55190 7 99 2.49E-15 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Clos_2740 a09193abf1918fd570fd1524154787a6 587 SUPERFAMILY SSF52374 110 463 2.35E-74 T 11-10-2018 Clos_2740 a09193abf1918fd570fd1524154787a6 587 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 86 2.4E-16 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_2740 a09193abf1918fd570fd1524154787a6 587 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 587 5.4E-130 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Clos_2740 a09193abf1918fd570fd1524154787a6 587 Gene3D G3DSA:3.30.1360.70 2 106 5.3E-21 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Clos_2740 a09193abf1918fd570fd1524154787a6 587 SMART SM00836 470 587 1.4E-37 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Clos_2740 a09193abf1918fd570fd1524154787a6 587 SUPERFAMILY SSF47323 464 587 1.48E-29 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2740 a09193abf1918fd570fd1524154787a6 587 Pfam PF00750 tRNA synthetases class I (R) 109 455 1.8E-75 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Clos_2740 a09193abf1918fd570fd1524154787a6 587 SMART SM01016 2 87 3.1E-18 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_0620 5a02daa282c213a4fb1f30aee797b690 111 Gene3D G3DSA:2.40.50.140 2 111 1.7E-30 T 11-10-2018 Clos_0620 5a02daa282c213a4fb1f30aee797b690 111 SUPERFAMILY SSF50249 4 110 1.42E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0620 5a02daa282c213a4fb1f30aee797b690 111 Pfam PF01588 Putative tRNA binding domain 14 109 1.8E-14 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Clos_0620 5a02daa282c213a4fb1f30aee797b690 111 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 6 110 4.1E-47 T 11-10-2018 IPR008231 Probable chaperone CsaA Clos_2461 b82ed0371f4d44883dd86ce4cc75931f 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2461 b82ed0371f4d44883dd86ce4cc75931f 56 Gene3D G3DSA:3.30.70.20 2 54 1.0E-20 T 11-10-2018 Clos_2461 b82ed0371f4d44883dd86ce4cc75931f 56 SUPERFAMILY SSF54862 1 55 3.45E-16 T 11-10-2018 Clos_2461 b82ed0371f4d44883dd86ce4cc75931f 56 Pfam PF12838 4Fe-4S dicluster domain 9 52 5.2E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0072 4462671584dc746cb5c41478086b339f 354 SUPERFAMILY SSF53067 3 172 2.69E-64 T 11-10-2018 Clos_0072 4462671584dc746cb5c41478086b339f 354 Gene3D G3DSA:3.30.420.40 137 328 3.4E-144 T 11-10-2018 Clos_0072 4462671584dc746cb5c41478086b339f 354 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 4 348 6.9E-140 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Clos_0072 4462671584dc746cb5c41478086b339f 354 PRINTS PR00471 Acetate kinase family signature 5 16 2.8E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_0072 4462671584dc746cb5c41478086b339f 354 PRINTS PR00471 Acetate kinase family signature 270 283 2.8E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_0072 4462671584dc746cb5c41478086b339f 354 PRINTS PR00471 Acetate kinase family signature 179 200 2.8E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_0072 4462671584dc746cb5c41478086b339f 354 PRINTS PR00471 Acetate kinase family signature 293 309 2.8E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_0072 4462671584dc746cb5c41478086b339f 354 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_0072 4462671584dc746cb5c41478086b339f 354 Pfam PF00871 Acetokinase family 4 329 4.7E-57 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_0072 4462671584dc746cb5c41478086b339f 354 SUPERFAMILY SSF53067 117 344 1.34E-40 T 11-10-2018 Clos_0072 4462671584dc746cb5c41478086b339f 354 Gene3D G3DSA:3.30.420.40 4 351 3.4E-144 T 11-10-2018 Clos_0072 4462671584dc746cb5c41478086b339f 354 PIRSF PIRSF036458 1 352 1.4E-141 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Clos_0072 4462671584dc746cb5c41478086b339f 354 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 179 196 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_0072 4462671584dc746cb5c41478086b339f 354 Hamap MF_00542 Probable butyrate kinase [buk]. 1 354 142.968 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 4 600 2.1E-189 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 SUPERFAMILY SSF46600 191 244 1.18E-13 T 11-10-2018 IPR036876 UVR domain superfamily Clos_2255 4a867629a65fe9cc8374c58da555b273 621 Gene3D G3DSA:1.10.150.20 561 620 8.7E-24 T 11-10-2018 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 SUPERFAMILY SSF82771 14 98 9.02E-26 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 Gene3D G3DSA:3.30.420.340 380 560 4.6E-55 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily Clos_2255 4a867629a65fe9cc8374c58da555b273 621 SMART SM00278 567 586 47.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 SMART SM00278 599 618 0.086 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 Gene3D G3DSA:3.40.1440.10 2 100 4.5E-36 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 SUPERFAMILY SSF47781 532 620 6.99E-23 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_2255 4a867629a65fe9cc8374c58da555b273 621 Pfam PF02151 UvrB/uvrC motif 205 239 5.3E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 618 29.761 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 Pfam PF12826 Helix-hairpin-helix motif 572 620 1.1E-11 T 11-10-2018 Clos_2255 4a867629a65fe9cc8374c58da555b273 621 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 388 553 3.2E-52 T 11-10-2018 IPR001162 UvrC family homology region Clos_2255 4a867629a65fe9cc8374c58da555b273 621 SMART SM00465 14 96 1.2E-24 T 11-10-2018 IPR000305 GIY-YIG endonuclease Clos_2255 4a867629a65fe9cc8374c58da555b273 621 Pfam PF01541 GIY-YIG catalytic domain 15 91 9.3E-12 T 11-10-2018 IPR000305 GIY-YIG endonuclease Clos_1504 651c02715276737623f4ef59805a118d 218 Pfam PF12945 Flagellar protein YcgR 8 92 7.6E-16 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Clos_1504 651c02715276737623f4ef59805a118d 218 Gene3D G3DSA:2.40.10.220 103 210 1.3E-11 T 11-10-2018 Clos_1504 651c02715276737623f4ef59805a118d 218 SUPERFAMILY SSF141371 101 178 2.16E-7 T 11-10-2018 Clos_1504 651c02715276737623f4ef59805a118d 218 Pfam PF07238 PilZ domain 102 207 4.3E-16 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 SMART SM00861 316 479 2.9E-62 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 SUPERFAMILY SSF52922 488 620 3.53E-27 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 Pfam PF02780 Transketolase, C-terminal domain 491 613 1.1E-26 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 SUPERFAMILY SSF52518 315 495 5.63E-54 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 280 6.2E-127 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 4 622 45.493 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 SUPERFAMILY SSF52518 3 378 8.07E-81 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 Pfam PF02779 Transketolase, pyrimidine binding domain 316 476 4.3E-39 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 Gene3D G3DSA:3.40.50.970 314 485 2.5E-68 T 11-10-2018 Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 Gene3D G3DSA:3.40.50.920 491 623 1.6E-32 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_1607 7dc8354f49fbe46f654e972b211b4cb2 624 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 5 620 1.1E-260 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 Pfam PF16360 GTP-binding GTPase Middle Region 109 189 9.0E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 Gene3D G3DSA:3.40.50.11060 11 133 2.0E-39 T 11-10-2018 Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 Gene3D G3DSA:3.40.50.300 194 362 8.6E-40 T 11-10-2018 Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 8.1E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 197 217 8.1E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 PIRSF PIRSF006809 1 415 1.5E-144 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 Hamap MF_00900 GTPase HflX [hflX]. 22 386 47.308 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 Pfam PF01926 50S ribosome-binding GTPase 196 322 3.5E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 Pfam PF13167 GTP-binding GTPase N-terminal 19 107 1.2E-30 T 11-10-2018 IPR025121 GTPase HflX, N-terminal Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 SUPERFAMILY SSF52540 194 364 2.46E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0996 06df8e7a64102d2f00364e2d5d139c50 416 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 5 354 1.3E-134 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 SUPERFAMILY SSF51215 30 156 2.62E-8 T 11-10-2018 IPR037923 Transcription regulator HTH-like Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 SUPERFAMILY SSF46689 169 218 2.51E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 Pfam PF12833 Helix-turn-helix domain 191 269 9.3E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 2.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 2.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 Gene3D G3DSA:1.10.10.2730 223 269 3.1E-17 T 11-10-2018 Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 SUPERFAMILY SSF46689 221 272 8.06E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 SMART SM00342 185 268 7.4E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2808 66f4a14e141b913f6fe751e68239ba1b 275 Gene3D G3DSA:1.10.10.60 166 222 1.4E-13 T 11-10-2018 Clos_2787 6d6774a7e06029edbaf6429ebcae24d6 402 Gene3D G3DSA:1.10.3210.10 198 353 4.0E-26 T 11-10-2018 Clos_2787 6d6774a7e06029edbaf6429ebcae24d6 402 Pfam PF00563 EAL domain 58 190 7.5E-13 T 11-10-2018 IPR001633 EAL domain Clos_2787 6d6774a7e06029edbaf6429ebcae24d6 402 Pfam PF08668 HDOD domain 204 326 3.5E-20 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Clos_2787 6d6774a7e06029edbaf6429ebcae24d6 402 SMART SM00052 2 195 9.6E-5 T 11-10-2018 IPR001633 EAL domain Clos_2787 6d6774a7e06029edbaf6429ebcae24d6 402 SUPERFAMILY SSF141868 2 191 7.85E-30 T 11-10-2018 IPR035919 EAL domain superfamily Clos_2787 6d6774a7e06029edbaf6429ebcae24d6 402 SUPERFAMILY SSF109604 181 400 4.08E-44 T 11-10-2018 Clos_2787 6d6774a7e06029edbaf6429ebcae24d6 402 Gene3D G3DSA:3.20.20.450 1 197 1.3E-18 T 11-10-2018 IPR035919 EAL domain superfamily Clos_2787 6d6774a7e06029edbaf6429ebcae24d6 402 PIRSF PIRSF003180 1 402 4.8E-129 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Clos_0008 7029b18858d32ee4ea32a317ee6a15cd 105 Pfam PF01740 STAS domain 16 101 3.2E-15 T 11-10-2018 IPR002645 STAS domain Clos_0008 7029b18858d32ee4ea32a317ee6a15cd 105 SUPERFAMILY SSF52091 10 103 1.22E-22 T 11-10-2018 IPR036513 STAS domain superfamily Clos_0008 7029b18858d32ee4ea32a317ee6a15cd 105 Gene3D G3DSA:3.30.750.24 8 105 3.3E-24 T 11-10-2018 IPR036513 STAS domain superfamily Clos_0008 7029b18858d32ee4ea32a317ee6a15cd 105 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 8 103 1.2E-23 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Clos_2856 e73aa359895b51fa7cf334821e00b9ae 563 Gene3D G3DSA:1.10.8.60 8 238 9.4E-104 T 11-10-2018 Clos_2856 e73aa359895b51fa7cf334821e00b9ae 563 SUPERFAMILY SSF52540 33 226 1.27E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2856 e73aa359895b51fa7cf334821e00b9ae 563 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 2.0E-140 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Clos_2856 e73aa359895b51fa7cf334821e00b9ae 563 Pfam PF13177 DNA polymerase III, delta subunit 20 178 8.4E-47 T 11-10-2018 Clos_2856 e73aa359895b51fa7cf334821e00b9ae 563 SUPERFAMILY SSF48019 244 360 2.04E-14 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Clos_2856 e73aa359895b51fa7cf334821e00b9ae 563 SMART SM00382 37 179 2.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2856 e73aa359895b51fa7cf334821e00b9ae 563 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 360 7.4E-12 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Clos_2856 e73aa359895b51fa7cf334821e00b9ae 563 Gene3D G3DSA:1.20.272.10 246 367 7.6E-13 T 11-10-2018 Clos_2856 e73aa359895b51fa7cf334821e00b9ae 563 Gene3D G3DSA:3.40.50.300 13 177 9.4E-104 T 11-10-2018 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 223 5.5E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.5E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 209 5.5E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.5E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.5E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 Gene3D G3DSA:3.40.50.620 1 335 8.6E-153 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 SUPERFAMILY SSF52374 3 316 6.7E-113 T 11-10-2018 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 490 9.2E-177 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 Gene3D G3DSA:1.10.10.350 394 494 6.0E-23 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 SUPERFAMILY SSF48163 320 487 1.31E-39 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 326 5.0E-112 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Clos_0467 3ae8a555ba556ff5a660feb5489b6c47 495 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 488 33.152 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 SUPERFAMILY SSF52172 10 139 2.56E-34 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1195 6c19d193e161e9fa210d465057a6236d 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 1.1E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 1.1E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 1.1E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 SMART SM00448 11 124 1.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 Gene3D G3DSA:3.40.50.12740 11 221 1.4E-71 T 11-10-2018 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 SMART SM00421 159 216 3.0E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 Pfam PF00072 Response regulator receiver domain 13 125 6.5E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 216 3.4E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_1195 6c19d193e161e9fa210d465057a6236d 224 SUPERFAMILY SSF46894 155 221 3.16E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 Gene3D G3DSA:2.30.22.10 132 187 1.7E-22 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 SUPERFAMILY SSF58014 37 132 3.66E-26 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 Gene3D G3DSA:3.90.20.20 16 131 9.3E-28 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 SUPERFAMILY SSF51064 133 187 5.23E-15 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 PRINTS PR00773 GrpE protein signature 58 74 2.6E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 PRINTS PR00773 GrpE protein signature 140 155 2.6E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 PRINTS PR00773 GrpE protein signature 86 101 2.6E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 PRINTS PR00773 GrpE protein signature 166 185 2.6E-26 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 Hamap MF_01151 Protein GrpE [grpE]. 2 187 20.06 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Clos_1232 cc91abe2ab863f9800f268175b365e34 187 Pfam PF01025 GrpE 27 187 2.3E-51 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Clos_2514 58f1ac0ff06b122c3d8a4b7b18214690 421 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 49 413 5.0E-126 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clos_2514 58f1ac0ff06b122c3d8a4b7b18214690 421 Gene3D G3DSA:3.40.640.10 12 290 2.3E-106 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_2514 58f1ac0ff06b122c3d8a4b7b18214690 421 SUPERFAMILY SSF53383 41 417 5.98E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2514 58f1ac0ff06b122c3d8a4b7b18214690 421 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 41 416 9.6E-155 T 11-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase Clos_2514 58f1ac0ff06b122c3d8a4b7b18214690 421 PIRSF PIRSF000390 37 419 2.4E-119 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Clos_2514 58f1ac0ff06b122c3d8a4b7b18214690 421 Gene3D G3DSA:3.90.1150.10 291 420 9.6E-36 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_0213 a1aecf204e945f5d54bfbd8346cc69c4 344 SUPERFAMILY SSF81345 9 337 7.45E-79 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0213 a1aecf204e945f5d54bfbd8346cc69c4 344 Gene3D G3DSA:1.10.3470.10 7 343 1.4E-105 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0213 a1aecf204e945f5d54bfbd8346cc69c4 344 Pfam PF01032 FecCD transport family 23 337 2.7E-87 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_0318 0fe5cedfb16de7b4be19afb86e16cc15 350 SUPERFAMILY SSF53807 74 348 1.1E-59 T 11-10-2018 Clos_0318 0fe5cedfb16de7b4be19afb86e16cc15 350 Pfam PF01497 Periplasmic binding protein 85 321 5.8E-33 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_0318 0fe5cedfb16de7b4be19afb86e16cc15 350 Gene3D G3DSA:3.40.50.1980 174 345 1.3E-37 T 11-10-2018 Clos_0318 0fe5cedfb16de7b4be19afb86e16cc15 350 Gene3D G3DSA:3.40.50.1980 62 158 6.0E-12 T 11-10-2018 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 SUPERFAMILY SSF46689 360 467 4.93E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 Gene3D G3DSA:3.40.50.300 132 318 1.7E-58 T 11-10-2018 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 SUPERFAMILY SSF55785 5 108 7.99E-9 T 11-10-2018 IPR035965 PAS domain superfamily Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 2.6E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 471 2.6E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 SUPERFAMILY SSF52540 147 391 5.43E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 Pfam PF02954 Bacterial regulatory protein, Fis family 429 467 3.0E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 Gene3D G3DSA:1.10.8.60 319 396 7.2E-20 T 11-10-2018 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 Gene3D G3DSA:3.30.450.20 15 123 1.7E-10 T 11-10-2018 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 Gene3D G3DSA:1.10.10.60 397 471 1.5E-13 T 11-10-2018 Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 SMART SM00382 168 310 4.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2496 3f999b33a10fb8c95ab5e5c577e41e70 475 Pfam PF00158 Sigma-54 interaction domain 148 313 1.2E-60 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 Gene3D G3DSA:1.20.272.10 228 332 8.9E-37 T 11-10-2018 Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 Gene3D G3DSA:1.10.3710.10 333 420 1.0E-18 T 11-10-2018 Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 Gene3D G3DSA:1.10.8.60 152 216 1.2E-9 T 11-10-2018 Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 41 149 6.0E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 Gene3D G3DSA:3.40.50.300 1 151 9.1E-38 T 11-10-2018 Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 SUPERFAMILY SSF52540 3 220 1.94E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 Pfam PF16193 AAA C-terminal domain 175 253 1.5E-20 T 11-10-2018 IPR032423 AAA C-terminal domain Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 417 4.0E-56 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 SUPERFAMILY SSF48019 239 418 2.83E-60 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Clos_1688 cbc8eaa32fd241b31b7354cc27f26e48 420 SMART SM00382 37 153 8.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 SUPERFAMILY SSF56042 827 972 5.76E-13 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 SMART SM01211 984 1247 2.1E-111 T 11-10-2018 Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 SUPERFAMILY SSF52317 981 1247 1.15E-68 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 Pfam PF02769 AIR synthase related protein, C-terminal domain 440 588 6.0E-23 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 SUPERFAMILY SSF55326 204 429 3.45E-29 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 Gene3D G3DSA:3.40.50.880 954 1248 5.7E-79 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 3 1247 0.0 T 11-10-2018 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 984 1247 1.1E-87 T 11-10-2018 Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 Gene3D G3DSA:3.90.650.10 820 953 2.1E-10 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 Gene3D G3DSA:3.90.650.10 437 607 6.5E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 Gene3D G3DSA:3.30.1330.10 645 809 4.2E-30 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 SUPERFAMILY SSF55326 632 810 1.31E-39 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Clos_2223 b19fe01e1037f554261cc6dd7f9a67a4 1248 SUPERFAMILY SSF56042 440 605 1.27E-35 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Clos_1700 abf5d885ad89990d8306ac0477a81b18 410 Gene3D G3DSA:3.40.640.10 35 285 9.0E-192 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1700 abf5d885ad89990d8306ac0477a81b18 410 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 5 410 53.987 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Clos_1700 abf5d885ad89990d8306ac0477a81b18 410 Gene3D G3DSA:3.90.1150.10 9 392 9.0E-192 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_1700 abf5d885ad89990d8306ac0477a81b18 410 PIRSF PIRSF000412 1 410 8.0E-175 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Clos_1700 abf5d885ad89990d8306ac0477a81b18 410 SUPERFAMILY SSF53383 3 409 2.2E-184 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1700 abf5d885ad89990d8306ac0477a81b18 410 Pfam PF00464 Serine hydroxymethyltransferase 7 382 1.9E-180 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Clos_1700 abf5d885ad89990d8306ac0477a81b18 410 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 220 236 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Clos_0834 980360b65178e3e0ce883c98b61bea14 541 SUPERFAMILY SSF55785 5 88 2.09E-7 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0834 980360b65178e3e0ce883c98b61bea14 541 Pfam PF00990 Diguanylate cyclase, GGDEF domain 382 535 2.5E-42 T 11-10-2018 IPR000160 GGDEF domain Clos_0834 980360b65178e3e0ce883c98b61bea14 541 Pfam PF00989 PAS fold 141 254 5.6E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_0834 980360b65178e3e0ce883c98b61bea14 541 Pfam PF13426 PAS domain 9 82 2.9E-4 T 11-10-2018 IPR000014 PAS domain Clos_0834 980360b65178e3e0ce883c98b61bea14 541 Gene3D G3DSA:3.30.450.20 118 255 3.8E-18 T 11-10-2018 Clos_0834 980360b65178e3e0ce883c98b61bea14 541 Gene3D G3DSA:3.30.450.20 5 110 9.2E-7 T 11-10-2018 Clos_0834 980360b65178e3e0ce883c98b61bea14 541 Pfam PF08447 PAS fold 286 354 5.3E-11 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Clos_0834 980360b65178e3e0ce883c98b61bea14 541 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 380 538 7.2E-48 T 11-10-2018 IPR000160 GGDEF domain Clos_0834 980360b65178e3e0ce883c98b61bea14 541 SUPERFAMILY SSF55785 269 371 1.26E-18 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0834 980360b65178e3e0ce883c98b61bea14 541 SMART SM00267 372 539 2.1E-49 T 11-10-2018 IPR000160 GGDEF domain Clos_0834 980360b65178e3e0ce883c98b61bea14 541 Gene3D G3DSA:3.30.70.270 371 539 1.0E-49 T 11-10-2018 Clos_0834 980360b65178e3e0ce883c98b61bea14 541 SUPERFAMILY SSF55073 387 538 2.75E-42 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_0834 980360b65178e3e0ce883c98b61bea14 541 SMART SM00091 138 206 2.6E-4 T 11-10-2018 IPR000014 PAS domain Clos_0834 980360b65178e3e0ce883c98b61bea14 541 SMART SM00091 262 328 2.0E-10 T 11-10-2018 IPR000014 PAS domain Clos_0834 980360b65178e3e0ce883c98b61bea14 541 SMART SM00091 1 64 140.0 T 11-10-2018 IPR000014 PAS domain Clos_0834 980360b65178e3e0ce883c98b61bea14 541 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 378 1.4E-18 T 11-10-2018 IPR000014 PAS domain Clos_0834 980360b65178e3e0ce883c98b61bea14 541 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 263 8.7E-14 T 11-10-2018 IPR000014 PAS domain Clos_0834 980360b65178e3e0ce883c98b61bea14 541 SUPERFAMILY SSF55785 137 249 7.15E-13 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0834 980360b65178e3e0ce883c98b61bea14 541 Gene3D G3DSA:3.30.450.20 268 370 2.9E-19 T 11-10-2018 Clos_1584 9250f93dfc4563c90310c35b62c8786f 179 SUPERFAMILY SSF47413 2 65 8.73E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1584 9250f93dfc4563c90310c35b62c8786f 179 Pfam PF07883 Cupin domain 106 173 4.3E-16 T 11-10-2018 IPR013096 Cupin 2, conserved barrel Clos_1584 9250f93dfc4563c90310c35b62c8786f 179 Pfam PF01381 Helix-turn-helix 7 58 4.5E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1584 9250f93dfc4563c90310c35b62c8786f 179 Gene3D G3DSA:2.60.120.10 73 174 9.5E-22 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_1584 9250f93dfc4563c90310c35b62c8786f 179 SUPERFAMILY SSF51182 54 179 1.48E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Clos_1584 9250f93dfc4563c90310c35b62c8786f 179 SMART SM00530 6 61 4.6E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1584 9250f93dfc4563c90310c35b62c8786f 179 Gene3D G3DSA:1.10.260.40 2 69 2.4E-18 T 11-10-2018 Clos_0906 5c27f5ac8e0c2e528e6ab82547ddadb6 180 Pfam PF00717 Peptidase S24-like 35 106 7.2E-12 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Clos_0906 5c27f5ac8e0c2e528e6ab82547ddadb6 180 Gene3D G3DSA:2.10.109.10 36 168 7.1E-32 T 11-10-2018 Clos_0906 5c27f5ac8e0c2e528e6ab82547ddadb6 180 SUPERFAMILY SSF51306 29 176 8.02E-43 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Clos_0906 5c27f5ac8e0c2e528e6ab82547ddadb6 180 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 171 3.6E-44 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_0906 5c27f5ac8e0c2e528e6ab82547ddadb6 180 ProSitePatterns PS00501 Signal peptidases I serine active site. 37 44 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Clos_0906 5c27f5ac8e0c2e528e6ab82547ddadb6 180 ProSitePatterns PS00761 Signal peptidases I signature 3. 135 148 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Clos_0906 5c27f5ac8e0c2e528e6ab82547ddadb6 180 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 6.0E-13 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_0906 5c27f5ac8e0c2e528e6ab82547ddadb6 180 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 82 94 6.0E-13 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_0906 5c27f5ac8e0c2e528e6ab82547ddadb6 180 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 130 149 6.0E-13 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_0508 7ab7c59b610bb0bcb45056af354d8ce1 122 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 122 28.088 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0508 7ab7c59b610bb0bcb45056af354d8ce1 122 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 122 3.0E-46 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0508 7ab7c59b610bb0bcb45056af354d8ce1 122 Gene3D G3DSA:3.30.420.100 5 122 1.0E-44 T 11-10-2018 Clos_0508 7ab7c59b610bb0bcb45056af354d8ce1 122 SUPERFAMILY SSF53137 7 120 2.62E-52 T 11-10-2018 Clos_0508 7ab7c59b610bb0bcb45056af354d8ce1 122 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 122 4.3E-42 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2556 7ee20f176e4d7683f8a4a7087a4c214d 276 Pfam PF08680 TATA-box binding 123 276 1.2E-35 T 11-10-2018 IPR014794 TATA-box binding Clos_2556 7ee20f176e4d7683f8a4a7087a4c214d 276 Gene3D G3DSA:3.30.360.40 204 276 6.8E-20 T 11-10-2018 Clos_2556 7ee20f176e4d7683f8a4a7087a4c214d 276 SUPERFAMILY SSF143842 74 274 1.96E-48 T 11-10-2018 IPR036209 YwmB-like superfamily Clos_0294 ea0866832944f3601143f55eadeed916 213 Gene3D G3DSA:1.20.120.680 7 211 2.7E-71 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Clos_0294 ea0866832944f3601143f55eadeed916 213 SUPERFAMILY SSF101262 3 211 3.27E-59 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Clos_0294 ea0866832944f3601143f55eadeed916 213 Pfam PF04961 Formiminotransferase-cyclodeaminase 8 191 6.0E-66 T 11-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Clos_1501 3b46fc3062490202837096612f4404e0 675 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 5 673 5.2E-263 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Clos_1501 3b46fc3062490202837096612f4404e0 675 PIRSF PIRSF005419 1 675 1.2E-257 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Clos_1501 3b46fc3062490202837096612f4404e0 675 Gene3D G3DSA:1.10.8.540 485 573 2.5E-32 T 11-10-2018 Clos_1501 3b46fc3062490202837096612f4404e0 675 Pfam PF00771 FHIPEP family 15 665 8.5E-272 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Clos_1501 3b46fc3062490202837096612f4404e0 675 Gene3D G3DSA:1.10.490.80 576 673 3.4E-24 T 11-10-2018 Clos_1501 3b46fc3062490202837096612f4404e0 675 Gene3D G3DSA:3.40.30.60 342 484 2.8E-54 T 11-10-2018 Clos_1501 3b46fc3062490202837096612f4404e0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 8.6E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Clos_1501 3b46fc3062490202837096612f4404e0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 8.6E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Clos_1501 3b46fc3062490202837096612f4404e0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 8.6E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Clos_1501 3b46fc3062490202837096612f4404e0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 8.6E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Clos_1501 3b46fc3062490202837096612f4404e0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 8.6E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Clos_1501 3b46fc3062490202837096612f4404e0 675 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 8.6E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Clos_1501 3b46fc3062490202837096612f4404e0 675 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 11-10-2018 IPR025505 FHIPEP conserved site Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Gene3D G3DSA:3.30.70.100 6 73 8.6E-8 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 SUPERFAMILY SSF55008 85 140 4.58E-10 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 312 862 1.2E-160 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00941 Cadmium-transporting ATPase signature 179 200 9.9E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00941 Cadmium-transporting ATPase signature 168 177 9.9E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00941 Cadmium-transporting ATPase signature 446 460 9.9E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00941 Cadmium-transporting ATPase signature 427 443 9.9E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00941 Cadmium-transporting ATPase signature 346 366 9.9E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 SUPERFAMILY SSF81665 312 833 4.18E-14 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 SUPERFAMILY SSF56784 561 858 8.76E-57 T 11-10-2018 IPR036412 HAD-like superfamily Clos_1087 8490e0447c746f92c57e3181527f94ac 866 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 312 860 4.6E-175 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 SUPERFAMILY SSF81653 364 461 7.85E-24 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Gene3D G3DSA:2.70.150.20 349 465 7.7E-31 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Pfam PF00702 haloacid dehalogenase-like hydrolase 560 771 5.8E-34 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Pfam PF00122 E1-E2 ATPase 364 542 1.4E-49 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Gene3D G3DSA:3.30.70.100 166 255 4.9E-11 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Gene3D G3DSA:3.30.70.100 83 165 1.9E-9 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 563 577 2.8E-21 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 757 776 2.8E-21 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 781 793 2.8E-21 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 701 711 2.8E-21 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 411 425 2.8E-21 T 11-10-2018 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 SUPERFAMILY SSF55008 6 61 5.5E-8 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Gene3D G3DSA:3.40.50.1000 544 810 2.4E-79 T 11-10-2018 IPR023214 HAD superfamily Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Gene3D G3DSA:3.40.1110.10 574 685 2.4E-79 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 565 571 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 ProSitePatterns PS01047 Heavy-metal-associated domain. 170 199 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 SUPERFAMILY SSF55008 165 235 6.02E-11 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Pfam PF00403 Heavy-metal-associated domain 168 223 2.0E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Pfam PF00403 Heavy-metal-associated domain 90 138 5.1E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 Pfam PF00403 Heavy-metal-associated domain 10 49 2.2E-5 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_1087 8490e0447c746f92c57e3181527f94ac 866 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 333 836 3.1E-76 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_2411 952f7d31bbd7717029eeb498d13ee1c6 76 Pfam PF13237 4Fe-4S dicluster domain 8 66 1.2E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2411 952f7d31bbd7717029eeb498d13ee1c6 76 Gene3D G3DSA:3.30.70.20 2 39 4.7E-8 T 11-10-2018 Clos_2411 952f7d31bbd7717029eeb498d13ee1c6 76 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2411 952f7d31bbd7717029eeb498d13ee1c6 76 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2411 952f7d31bbd7717029eeb498d13ee1c6 76 Gene3D G3DSA:3.30.70.3270 40 76 1.3E-5 T 11-10-2018 Clos_2411 952f7d31bbd7717029eeb498d13ee1c6 76 SUPERFAMILY SSF54862 4 73 8.91E-17 T 11-10-2018 Clos_1529 f5394fd344c5e34250f7fe8c2d56beef 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 109 25.277 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Clos_1529 f5394fd344c5e34250f7fe8c2d56beef 132 Gene3D G3DSA:3.30.300.20 1 104 1.7E-34 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Clos_1529 f5394fd344c5e34250f7fe8c2d56beef 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 96 3.0E-32 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Clos_1529 f5394fd344c5e34250f7fe8c2d56beef 132 SUPERFAMILY SSF89919 1 102 1.57E-31 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Clos_1529 f5394fd344c5e34250f7fe8c2d56beef 132 Pfam PF02033 Ribosome-binding factor A 5 108 3.0E-31 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Clos_1529 f5394fd344c5e34250f7fe8c2d56beef 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 1.2E-31 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 630 9.1E-116 T 11-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 121 1.6E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 Gene3D G3DSA:1.10.10.2770 441 571 2.1E-27 T 11-10-2018 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 SUPERFAMILY SSF46785 579 630 9.98E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 SUPERFAMILY SSF52540 3 195 2.31E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 Pfam PF09106 Elongation factor SelB, winged helix 448 503 1.4E-15 T 11-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 Gene3D G3DSA:1.10.10.10 574 631 5.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 Gene3D G3DSA:2.40.30.10 175 296 1.3E-38 T 11-10-2018 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 Pfam PF03144 Elongation factor Tu domain 2 194 260 1.4E-11 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 SUPERFAMILY SSF50465 265 364 2.12E-27 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 SUPERFAMILY SSF50447 174 267 6.87E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 PRINTS PR00315 GTP-binding elongation factor signature 73 84 2.4E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 PRINTS PR00315 GTP-binding elongation factor signature 5 18 2.4E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 PRINTS PR00315 GTP-binding elongation factor signature 57 67 2.4E-6 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 Pfam PF09107 Elongation factor SelB, winged helix 585 630 9.0E-20 T 11-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 Gene3D G3DSA:3.40.50.300 1 174 1.2E-45 T 11-10-2018 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 Pfam PF00009 Elongation factor Tu GTP binding domain 4 167 8.9E-30 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1735 72d3cf3d308662cf08c442885ce8024c 631 SUPERFAMILY SSF46785 438 508 8.16E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0801 b8e1673f766137cbdd6396dc18a04da6 492 Pfam PF00171 Aldehyde dehydrogenase family 13 328 2.3E-26 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Clos_0801 b8e1673f766137cbdd6396dc18a04da6 492 Gene3D G3DSA:3.40.309.10 223 407 5.4E-178 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Clos_0801 b8e1673f766137cbdd6396dc18a04da6 492 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 492 4.2E-233 T 11-10-2018 IPR013357 Acetaldehyde dehydrogenase, acetylating Clos_0801 b8e1673f766137cbdd6396dc18a04da6 492 SUPERFAMILY SSF53720 11 450 9.82E-83 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Clos_0801 b8e1673f766137cbdd6396dc18a04da6 492 Gene3D G3DSA:3.40.605.10 15 445 5.4E-178 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 Pfam PF00344 SecY translocase 69 407 2.7E-118 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 SUPERFAMILY SSF103491 2 414 6.8E-126 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PIRSF PIRSF004557 1 424 3.4E-125 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 423 30.913 T 11-10-2018 IPR026593 Protein translocase subunit SecY Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 Gene3D G3DSA:1.10.3370.10 1 419 2.7E-167 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 168 191 9.7E-98 T 11-10-2018 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 360 378 9.7E-98 T 11-10-2018 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 392 410 9.7E-98 T 11-10-2018 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 9.7E-98 T 11-10-2018 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 9.7E-98 T 11-10-2018 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 142 167 9.7E-98 T 11-10-2018 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 305 327 9.7E-98 T 11-10-2018 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 260 279 9.7E-98 T 11-10-2018 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 9.7E-98 T 11-10-2018 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 418 3.2E-125 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0512 7e5f7de05419910ce9d3ae6ebfa2a753 424 ProSitePatterns PS00756 Protein secY signature 2. 161 178 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0004 5b9a93f56364e3206c8c3bb347592590 365 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Clos_0004 5b9a93f56364e3206c8c3bb347592590 365 ProSitePatterns PS00618 RecF protein signature 2. 309 327 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Clos_0004 5b9a93f56364e3206c8c3bb347592590 365 SUPERFAMILY SSF52540 1 357 5.48E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0004 5b9a93f56364e3206c8c3bb347592590 365 Gene3D G3DSA:3.40.50.300 6 341 1.1E-111 T 11-10-2018 Clos_0004 5b9a93f56364e3206c8c3bb347592590 365 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 348 2.9E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Clos_0004 5b9a93f56364e3206c8c3bb347592590 365 Gene3D G3DSA:1.20.1050.90 120 308 1.1E-111 T 11-10-2018 Clos_0004 5b9a93f56364e3206c8c3bb347592590 365 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 364 4.5E-112 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Clos_0004 5b9a93f56364e3206c8c3bb347592590 365 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 365 94.52 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Clos_2288 267f25384cf14814eb0282df7c4780ad 1174 Gene3D G3DSA:3.40.50.300 4 280 6.8E-43 T 11-10-2018 Clos_2288 267f25384cf14814eb0282df7c4780ad 1174 Gene3D G3DSA:3.40.50.300 915 1173 3.9E-23 T 11-10-2018 Clos_2288 267f25384cf14814eb0282df7c4780ad 1174 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1055 1131 3.7E-13 T 11-10-2018 Clos_2288 267f25384cf14814eb0282df7c4780ad 1174 SUPERFAMILY SSF52540 905 1165 1.17E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2288 267f25384cf14814eb0282df7c4780ad 1174 Pfam PF13476 AAA domain 6 264 1.2E-11 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain Clos_2288 267f25384cf14814eb0282df7c4780ad 1174 SUPERFAMILY SSF52540 22 1149 2.58E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0323 55fda38cd8753ffec312e3088cb9d19f 262 Gene3D G3DSA:3.40.50.1400 4 257 3.6E-90 T 11-10-2018 Clos_0323 55fda38cd8753ffec312e3088cb9d19f 262 SUPERFAMILY SSF53800 3 257 4.97E-74 T 11-10-2018 Clos_0323 55fda38cd8753ffec312e3088cb9d19f 262 Gene3D G3DSA:3.40.50.1400 114 238 3.6E-90 T 11-10-2018 Clos_0323 55fda38cd8753ffec312e3088cb9d19f 262 PIRSF PIRSF033579 1 261 3.6E-93 T 11-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Clos_0323 55fda38cd8753ffec312e3088cb9d19f 262 Pfam PF06180 Cobalt chelatase (CbiK) 4 257 4.2E-87 T 11-10-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Clos_0873 7520ac65506c91fe8117fb7528fc0b9e 415 Gene3D G3DSA:3.90.1710.10 108 241 4.4E-84 T 11-10-2018 Clos_0873 7520ac65506c91fe8117fb7528fc0b9e 415 Pfam PF06545 Protein of unknown function (DUF1116) 87 301 2.8E-102 T 11-10-2018 IPR009499 Protein of unknown function DUF1116 Clos_0873 7520ac65506c91fe8117fb7528fc0b9e 415 Gene3D G3DSA:3.90.1700.10 249 414 6.3E-78 T 11-10-2018 Clos_0873 7520ac65506c91fe8117fb7528fc0b9e 415 Gene3D G3DSA:1.10.10.660 41 107 4.4E-84 T 11-10-2018 IPR024033 Uncharacterised domain superfamily, YlbE Clos_1467 fa711a63a624f12b3989e2981bbcca49 249 Gene3D G3DSA:3.40.1280.10 1 177 1.0E-74 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clos_1467 fa711a63a624f12b3989e2981bbcca49 249 Gene3D G3DSA:1.10.1270.20 178 249 1.1E-29 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Clos_1467 fa711a63a624f12b3989e2981bbcca49 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 237 3.4E-96 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Clos_1467 fa711a63a624f12b3989e2981bbcca49 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 109.435 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Clos_1467 fa711a63a624f12b3989e2981bbcca49 249 SUPERFAMILY SSF75217 1 247 1.83E-100 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Clos_1467 fa711a63a624f12b3989e2981bbcca49 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 226 1.3E-67 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Clos_1467 fa711a63a624f12b3989e2981bbcca49 249 PIRSF PIRSF000386 1 249 2.7E-104 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Clos_0594 3eb682a7c5b84c19abf928e496461e69 96 SUPERFAMILY SSF46689 8 93 2.15E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0594 3eb682a7c5b84c19abf928e496461e69 96 Gene3D G3DSA:1.10.10.60 12 91 2.2E-7 T 11-10-2018 Clos_0594 3eb682a7c5b84c19abf928e496461e69 96 Pfam PF01527 Transposase 8 76 2.4E-12 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Clos_2450 ef4e194a80246fa710bf2f6b3e0b8d5c 291 Gene3D G3DSA:1.10.1670.50 234 291 7.9E-27 T 11-10-2018 Clos_2450 ef4e194a80246fa710bf2f6b3e0b8d5c 291 SUPERFAMILY SSF48150 112 285 4.4E-45 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Clos_2450 ef4e194a80246fa710bf2f6b3e0b8d5c 291 SUPERFAMILY SSF55945 9 111 3.77E-22 T 11-10-2018 Clos_2450 ef4e194a80246fa710bf2f6b3e0b8d5c 291 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 268 7.0E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Clos_2450 ef4e194a80246fa710bf2f6b3e0b8d5c 291 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 12 117 3.9E-25 T 11-10-2018 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357|Reactome: R-HSA-5649702 Clos_2450 ef4e194a80246fa710bf2f6b3e0b8d5c 291 SMART SM00478 122 285 1.3E-20 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Clos_2450 ef4e194a80246fa710bf2f6b3e0b8d5c 291 Gene3D G3DSA:1.10.340.30 112 233 9.3E-41 T 11-10-2018 Clos_2450 ef4e194a80246fa710bf2f6b3e0b8d5c 291 Gene3D G3DSA:3.30.310.260 1 111 2.3E-43 T 11-10-2018 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Pfam PF00989 PAS fold 144 192 2.4E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Pfam PF02954 Bacterial regulatory protein, Fis family 542 580 5.6E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 363 378 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 301 314 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 SUPERFAMILY SSF52540 277 521 9.19E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Gene3D G3DSA:3.10.580.10 67 134 5.6E-10 T 11-10-2018 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Pfam PF00571 CBS domain 82 130 1.2E-9 T 11-10-2018 IPR000644 CBS domain Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Pfam PF00571 CBS domain 11 61 7.7E-8 T 11-10-2018 IPR000644 CBS domain Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Gene3D G3DSA:1.10.8.60 448 521 4.8E-24 T 11-10-2018 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Gene3D G3DSA:3.10.580.10 2 64 1.0E-10 T 11-10-2018 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 SUPERFAMILY SSF46689 490 584 1.74E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Pfam PF00158 Sigma-54 interaction domain 278 443 2.8E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Gene3D G3DSA:1.10.10.60 522 584 6.9E-14 T 11-10-2018 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 SMART SM00091 140 206 9.5E-7 T 11-10-2018 IPR000014 PAS domain Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 2.4E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 2.4E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 SMART SM00382 297 440 6.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Gene3D G3DSA:3.40.50.300 262 447 5.0E-62 T 11-10-2018 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 139 247 1.2E-8 T 11-10-2018 IPR000014 PAS domain Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 SMART SM00116 18 66 7.5E-4 T 11-10-2018 IPR000644 CBS domain Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 SMART SM00116 85 132 1.9E-6 T 11-10-2018 IPR000644 CBS domain Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 Gene3D G3DSA:3.30.450.20 135 241 2.3E-14 T 11-10-2018 Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 SUPERFAMILY SSF55785 138 241 2.36E-11 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0026 94831bdb7a0cbb9b6c942a349affa7e1 585 SUPERFAMILY SSF54631 9 131 1.65E-25 T 11-10-2018 Clos_0995 1e2a8b8bac8499dc86bf3a67dee34684 292 PIRSF PIRSF018249 5 292 4.4E-82 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 Clos_0995 1e2a8b8bac8499dc86bf3a67dee34684 292 Pfam PF13847 Methyltransferase domain 101 194 7.6E-10 T 11-10-2018 IPR025714 Methyltransferase domain Clos_0995 1e2a8b8bac8499dc86bf3a67dee34684 292 SUPERFAMILY SSF53335 35 272 2.39E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0995 1e2a8b8bac8499dc86bf3a67dee34684 292 Gene3D G3DSA:3.40.50.150 19 291 1.2E-59 T 11-10-2018 Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 SUPERFAMILY SSF89447 2 51 3.4E-13 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 PIRSF PIRSF026579 1 182 2.7E-88 T 11-10-2018 IPR014213 Sporulation stage V, protein T Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.3E-14 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.6E-9 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 Gene3D G3DSA:3.30.450.40 56 182 3.9E-42 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 Gene3D G3DSA:2.10.260.10 1 51 6.3E-22 T 11-10-2018 Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 SUPERFAMILY SSF55781 106 181 5.4E-5 T 11-10-2018 Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 SMART SM00966 8 52 4.5E-9 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 182 1.4E-85 T 11-10-2018 IPR014213 Sporulation stage V, protein T Clos_2640 ca0adaa1ad538f0f47cbf949617eb61a 182 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 182 5.7E-49 T 11-10-2018 IPR039472 Sporulation stage V protein T, GAF domain Clos_1818 c4f056d7ac33e3d1628d7c62f27f5f73 469 Pfam PF00395 S-layer homology domain 128 144 0.013 T 11-10-2018 IPR001119 S-layer homology domain Clos_1818 c4f056d7ac33e3d1628d7c62f27f5f73 469 Pfam PF00395 S-layer homology domain 162 204 6.0E-13 T 11-10-2018 IPR001119 S-layer homology domain Clos_1818 c4f056d7ac33e3d1628d7c62f27f5f73 469 Pfam PF00395 S-layer homology domain 27 68 5.4E-8 T 11-10-2018 IPR001119 S-layer homology domain Clos_2281 666ce7b83ca18b688c7c9f64f4c33138 173 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 54 1.8E-13 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Clos_2281 666ce7b83ca18b688c7c9f64f4c33138 173 SUPERFAMILY SSF50331 79 172 2.46E-20 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Clos_2281 666ce7b83ca18b688c7c9f64f4c33138 173 Gene3D G3DSA:2.40.50.100 97 167 1.9E-26 T 11-10-2018 Clos_2281 666ce7b83ca18b688c7c9f64f4c33138 173 Gene3D G3DSA:1.10.1660.10 6 55 7.4E-7 T 11-10-2018 Clos_2281 666ce7b83ca18b688c7c9f64f4c33138 173 Pfam PF12728 Helix-turn-helix domain 6 54 4.4E-14 T 11-10-2018 Clos_2281 666ce7b83ca18b688c7c9f64f4c33138 173 Pfam PF03459 TOBE domain 111 170 6.7E-10 T 11-10-2018 IPR005116 Transport-associated OB, type 1 Clos_2281 666ce7b83ca18b688c7c9f64f4c33138 173 Gene3D G3DSA:2.40.50.140 68 171 1.9E-26 T 11-10-2018 Clos_1852 426a2f31a7cd38c28affd9680952c258 72 Gene3D G3DSA:1.10.260.40 2 71 5.3E-12 T 11-10-2018 Clos_1852 426a2f31a7cd38c28affd9680952c258 72 Pfam PF01381 Helix-turn-helix 7 55 1.6E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1852 426a2f31a7cd38c28affd9680952c258 72 SUPERFAMILY SSF47413 5 63 1.35E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1852 426a2f31a7cd38c28affd9680952c258 72 SMART SM00530 4 59 3.3E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_2721 dbf5389ae44e710b85d51b35a0531fbc 447 Gene3D G3DSA:3.30.70.100 3 67 2.9E-16 T 11-10-2018 Clos_2721 dbf5389ae44e710b85d51b35a0531fbc 447 Pfam PF13473 Cupredoxin-like domain 338 423 9.1E-7 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain Clos_2721 dbf5389ae44e710b85d51b35a0531fbc 447 SUPERFAMILY SSF55008 3 67 5.24E-13 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_2721 dbf5389ae44e710b85d51b35a0531fbc 447 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 37 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Clos_2721 dbf5389ae44e710b85d51b35a0531fbc 447 Pfam PF00403 Heavy-metal-associated domain 7 62 3.7E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_2721 dbf5389ae44e710b85d51b35a0531fbc 447 Gene3D G3DSA:2.60.40.420 330 424 2.8E-27 T 11-10-2018 IPR008972 Cupredoxin Clos_2721 dbf5389ae44e710b85d51b35a0531fbc 447 SUPERFAMILY SSF49503 336 423 4.01E-7 T 11-10-2018 IPR008972 Cupredoxin Clos_2721 dbf5389ae44e710b85d51b35a0531fbc 447 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 113 303 5.1E-46 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain Clos_0096 aebdc3205ecd4268adca9a10832af525 463 SMART SM00388 241 307 2.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 Gene3D G3DSA:1.10.287.130 240 303 6.7E-20 T 11-10-2018 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 SUPERFAMILY SSF55874 297 459 3.27E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0096 aebdc3205ecd4268adca9a10832af525 463 SUPERFAMILY SSF158472 189 236 3.27E-8 T 11-10-2018 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 Pfam PF00672 HAMP domain 189 236 1.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 460 4.0E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0096 aebdc3205ecd4268adca9a10832af525 463 Gene3D G3DSA:3.30.565.10 304 459 1.1E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0096 aebdc3205ecd4268adca9a10832af525 463 SUPERFAMILY SSF47384 224 308 1.28E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 SMART SM00304 188 240 7.5E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 304 6.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 SUPERFAMILY SSF103190 50 163 7.06E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Clos_0096 aebdc3205ecd4268adca9a10832af525 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 1.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 1.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 1.7E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0096 aebdc3205ecd4268adca9a10832af525 463 SMART SM00387 353 461 1.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0096 aebdc3205ecd4268adca9a10832af525 463 Gene3D G3DSA:1.20.1480.50 151 239 5.8E-11 T 11-10-2018 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 SMART SM00400 36 90 6.0E-32 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 Pfam PF10410 DnaB-helicase binding domain of primase 365 419 9.1E-7 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 Pfam PF13155 Toprim-like 260 345 1.6E-23 T 11-10-2018 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 SUPERFAMILY SSF56731 117 419 2.49E-102 T 11-10-2018 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 250 7.3E-42 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 Pfam PF01807 CHC2 zinc finger 6 100 4.0E-35 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 SUPERFAMILY SSF57783 5 100 2.38E-33 T 11-10-2018 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 Hamap MF_00974 DNA primase [dnaG]. 4 586 27.876 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 Gene3D G3DSA:3.40.1360.10 240 362 5.7E-44 T 11-10-2018 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 PIRSF PIRSF002811 2 601 1.2E-164 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 Gene3D G3DSA:3.90.980.10 109 239 1.1E-42 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 SMART SM00493 257 328 6.8E-18 T 11-10-2018 IPR006171 TOPRIM domain Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 TIGRFAM TIGR01391 dnaG: DNA primase 5 411 4.4E-143 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 SUPERFAMILY SSF48024 463 504 6.15E-5 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Clos_1278 95fd92be66f91637a5ecb1870b01a776 604 Gene3D G3DSA:3.90.580.10 1 103 4.8E-38 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Clos_0497 4ea65696e28b9c6c77f812648fe050b5 110 Pfam PF00237 Ribosomal protein L22p/L17e 6 108 1.8E-41 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Clos_0497 4ea65696e28b9c6c77f812648fe050b5 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 1.6E-47 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0497 4ea65696e28b9c6c77f812648fe050b5 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0497 4ea65696e28b9c6c77f812648fe050b5 110 Gene3D G3DSA:3.90.470.10 1 110 8.4E-50 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0497 4ea65696e28b9c6c77f812648fe050b5 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 30.554 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0497 4ea65696e28b9c6c77f812648fe050b5 110 SUPERFAMILY SSF54843 2 110 6.02E-46 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 Gene3D G3DSA:3.30.565.10 301 452 5.2E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1733 64528331f1d1fe355107c6bad16f5045 457 Pfam PF16736 Single Cache-like 51 138 5.2E-7 T 11-10-2018 IPR031967 PhoR, single Cache-like domain Clos_1733 64528331f1d1fe355107c6bad16f5045 457 SUPERFAMILY SSF103190 49 147 7.85E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Clos_1733 64528331f1d1fe355107c6bad16f5045 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 293 3.4E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 Gene3D G3DSA:3.30.450.20 8 151 1.4E-5 T 11-10-2018 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 Pfam PF00672 HAMP domain 175 217 4.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 SUPERFAMILY SSF47384 210 295 1.65E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 Gene3D G3DSA:1.10.287.130 222 299 1.2E-16 T 11-10-2018 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 3.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 3.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 3.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 3.4E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 SUPERFAMILY SSF158472 175 223 3.79E-8 T 11-10-2018 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 SMART SM00387 339 451 2.5E-41 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1733 64528331f1d1fe355107c6bad16f5045 457 SUPERFAMILY SSF55874 283 449 9.56E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1733 64528331f1d1fe355107c6bad16f5045 457 SMART SM00388 227 294 2.5E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 SMART SM00304 174 226 8.9E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_1733 64528331f1d1fe355107c6bad16f5045 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 449 1.2E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1733 64528331f1d1fe355107c6bad16f5045 457 Gene3D G3DSA:1.10.8.500 173 221 1.1E-6 T 11-10-2018 Clos_1751 904ead1e8b4561a4361779311e031037 100 TIGRFAM TIGR00062 L27: ribosomal protein bL27 10 90 1.1E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1751 904ead1e8b4561a4361779311e031037 100 Gene3D G3DSA:2.40.50.100 30 100 1.5E-29 T 11-10-2018 Clos_1751 904ead1e8b4561a4361779311e031037 100 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 10 93 28.046 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1751 904ead1e8b4561a4361779311e031037 100 ProSitePatterns PS00831 Ribosomal protein L27 signature. 43 57 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1751 904ead1e8b4561a4361779311e031037 100 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 37 78 2.0E-14 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1751 904ead1e8b4561a4361779311e031037 100 Pfam PF01016 Ribosomal L27 protein 11 90 4.6E-36 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1751 904ead1e8b4561a4361779311e031037 100 PRINTS PR00063 Ribosomal protein L27 signature 13 37 5.4E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1751 904ead1e8b4561a4361779311e031037 100 PRINTS PR00063 Ribosomal protein L27 signature 63 87 5.4E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1751 904ead1e8b4561a4361779311e031037 100 PRINTS PR00063 Ribosomal protein L27 signature 38 62 5.4E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1751 904ead1e8b4561a4361779311e031037 100 SUPERFAMILY SSF110324 11 92 1.01E-33 T 11-10-2018 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 SMART SM00463 712 790 2.6E-12 T 11-10-2018 IPR002625 Smr domain Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 Pfam PF00488 MutS domain V 330 512 5.0E-37 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 789 21.231 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 SMART SM00534 327 512 1.5E-77 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 Gene3D G3DSA:3.30.1370.110 703 790 2.0E-22 T 11-10-2018 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 Gene3D G3DSA:3.40.50.300 292 597 3.7E-86 T 11-10-2018 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 SUPERFAMILY SSF48334 20 287 7.32E-27 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 SUPERFAMILY SSF160443 713 790 1.7E-8 T 11-10-2018 IPR036063 Smr domain superfamily Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 PIRSF PIRSF005814 1 790 3.1E-262 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 409 425 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 SMART SM00533 9 314 3.3E-23 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 790 1.5E-221 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 Pfam PF01713 Smr domain 715 790 3.8E-17 T 11-10-2018 IPR002625 Smr domain Clos_1836 a6a44517ab4ea2c7d3c61abf6d88354d 790 SUPERFAMILY SSF52540 291 512 3.33E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1029 23b4ccb4c8109c543afbd8e728ab0003 172 Pfam PF04143 Sulphur transport 2 162 4.5E-37 T 11-10-2018 IPR007272 Sulphur transport domain Clos_1741 f78b8564ddd9ea6b1465b4c068244b77 291 Pfam PF03313 Serine dehydratase alpha chain 16 276 3.2E-77 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Clos_1741 f78b8564ddd9ea6b1465b4c068244b77 291 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 3 290 4.3E-112 T 11-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Clos_2615 97ba16ae926efa4f3944477ef31065a5 554 Gene3D G3DSA:2.40.420.20 464 525 1.4E-12 T 11-10-2018 Clos_2615 97ba16ae926efa4f3944477ef31065a5 554 Gene3D G3DSA:2.40.30.170 380 463 2.5E-11 T 11-10-2018 Clos_2615 97ba16ae926efa4f3944477ef31065a5 554 SUPERFAMILY SSF111369 83 262 2.75E-6 T 11-10-2018 Clos_2615 97ba16ae926efa4f3944477ef31065a5 554 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 339 424 4.9E-9 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Clos_2615 97ba16ae926efa4f3944477ef31065a5 554 Gene3D G3DSA:2.40.30.170 172 262 8.2E-10 T 11-10-2018 Clos_2615 97ba16ae926efa4f3944477ef31065a5 554 Pfam PF13437 HlyD family secretion protein 148 245 9.7E-16 T 11-10-2018 Clos_2615 97ba16ae926efa4f3944477ef31065a5 554 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 84 104 7.9E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Clos_2615 97ba16ae926efa4f3944477ef31065a5 554 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 449 464 7.9E-6 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 Gene3D G3DSA:3.40.50.11540 148 326 1.3E-79 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 Gene3D G3DSA:3.30.70.20 527 581 6.8E-15 T 11-10-2018 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 Pfam PF10531 SLBB domain 339 387 3.4E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 Gene3D G3DSA:1.20.1440.230 423 526 2.4E-36 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 143 315 8.2E-49 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 SUPERFAMILY SSF142984 337 420 2.09E-25 T 11-10-2018 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 Gene3D G3DSA:3.10.20.600 328 422 3.3E-33 T 11-10-2018 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 426 510 5.1E-34 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 Pfam PF12838 4Fe-4S dicluster domain 533 578 2.9E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 SUPERFAMILY SSF142019 97 336 1.22E-91 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 SUPERFAMILY SSF54862 531 581 1.16E-14 T 11-10-2018 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 Gene3D G3DSA:3.40.30.10 3 91 1.2E-8 T 11-10-2018 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 534 545 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 SMART SM00928 425 470 1.7E-22 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 SUPERFAMILY SSF140490 421 522 4.45E-38 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0276 bc21dde0a1814bd33aca88d07fcded08 582 SUPERFAMILY SSF52833 3 78 4.14E-8 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 Gene3D G3DSA:3.40.50.300 7 599 1.9E-249 T 11-10-2018 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 Gene3D G3DSA:1.20.1580.10 92 496 1.9E-249 T 11-10-2018 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 Pfam PF00005 ABC transporter 626 862 4.9E-10 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 Gene3D G3DSA:3.30.190.20 132 243 1.9E-249 T 11-10-2018 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 SUPERFAMILY SSF52540 616 915 3.77E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 Gene3D G3DSA:1.20.1580.10 695 832 1.5E-146 T 11-10-2018 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 927 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 Gene3D G3DSA:1.10.8.280 286 407 1.9E-249 T 11-10-2018 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 Gene3D G3DSA:3.40.50.300 616 938 1.5E-146 T 11-10-2018 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 SMART SM00382 25 568 20.0 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 SMART SM00382 635 910 0.0053 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 942 23.077 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Clos_2257 8e167bc6cebc8e5ce3443fd05305154b 947 SUPERFAMILY SSF52540 12 573 1.31E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2030 f9140703a6bb4685065c6133f1500cda 578 Pfam PF13538 UvrD-like helicase C-terminal domain 512 555 1.1E-6 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain Clos_2030 f9140703a6bb4685065c6133f1500cda 578 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 235 382 2.7E-8 T 11-10-2018 IPR018647 Domain of unknown function DUF2075 Clos_2030 f9140703a6bb4685065c6133f1500cda 578 Pfam PF08378 Nuclease-related domain 15 115 1.7E-11 T 11-10-2018 IPR011528 Nuclease-related domain, NERD Clos_2030 f9140703a6bb4685065c6133f1500cda 578 Gene3D G3DSA:3.40.50.300 209 395 1.5E-21 T 11-10-2018 Clos_2030 f9140703a6bb4685065c6133f1500cda 578 SUPERFAMILY SSF52540 211 560 2.16E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2030 f9140703a6bb4685065c6133f1500cda 578 Gene3D G3DSA:3.40.50.300 404 577 4.0E-14 T 11-10-2018 Clos_2314 1e987b7ba66a047f966dc45b360b2cb2 345 SUPERFAMILY SSF53187 8 344 3.87E-51 T 11-10-2018 Clos_2314 1e987b7ba66a047f966dc45b360b2cb2 345 SUPERFAMILY SSF101821 76 188 5.49E-30 T 11-10-2018 Clos_2314 1e987b7ba66a047f966dc45b360b2cb2 345 PIRSF PIRSF001123 7 345 2.0E-34 T 11-10-2018 IPR008007 Peptidase M42 Clos_2314 1e987b7ba66a047f966dc45b360b2cb2 345 Pfam PF05343 M42 glutamyl aminopeptidase 51 338 2.3E-76 T 11-10-2018 IPR008007 Peptidase M42 Clos_2314 1e987b7ba66a047f966dc45b360b2cb2 345 Gene3D G3DSA:2.40.30.40 79 173 1.2E-115 T 11-10-2018 IPR023367 Peptidase M42, domain 2 Clos_2314 1e987b7ba66a047f966dc45b360b2cb2 345 Gene3D G3DSA:3.40.630.10 17 343 1.2E-115 T 11-10-2018 Clos_1019 b63552d1c6e4a320ac126e5489ecc6d3 251 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 5 19 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Clos_1019 b63552d1c6e4a320ac126e5489ecc6d3 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 206 7.5E-45 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Clos_1019 b63552d1c6e4a320ac126e5489ecc6d3 251 Gene3D G3DSA:3.30.950.10 110 230 1.9E-46 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Clos_1019 b63552d1c6e4a320ac126e5489ecc6d3 251 Gene3D G3DSA:3.40.1010.10 1 109 2.5E-28 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Clos_1019 b63552d1c6e4a320ac126e5489ecc6d3 251 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 2 247 1.3E-102 T 11-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 Clos_1019 b63552d1c6e4a320ac126e5489ecc6d3 251 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 75 108 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Clos_1019 b63552d1c6e4a320ac126e5489ecc6d3 251 SUPERFAMILY SSF53790 1 247 3.53E-65 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 Gene3D G3DSA:3.80.30.10 135 314 5.3E-61 T 11-10-2018 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 PIRSF PIRSF000371 4 308 3.6E-102 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 Pfam PF13353 4Fe-4S single cluster domain 25 62 7.5E-6 T 11-10-2018 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 Pfam PF04055 Radical SAM superfamily 32 252 1.4E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 TIGRFAM TIGR04395 cutC_activ_rSAM: choline TMA-lyase-activating enzyme 9 316 2.9E-172 T 11-10-2018 IPR030905 Choline TMA-lyase-activating enzyme Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 SUPERFAMILY SSF102114 95 285 4.9E-18 T 11-10-2018 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 Hamap MF_02059 Choline trimethylamine-lyase activating enzyme [cutD]. 8 316 62.322 T 11-10-2018 IPR030905 Choline TMA-lyase-activating enzyme Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 ProSitePatterns PS01087 Radical activating enzymes signature. 26 47 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 SUPERFAMILY SSF54862 14 157 2.3E-21 T 11-10-2018 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 Pfam PF13187 4Fe-4S dicluster domain 64 108 5.5E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 Gene3D G3DSA:3.30.70.20 59 122 5.1E-10 T 11-10-2018 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 15 307 4.8E-117 T 11-10-2018 Clos_2397 5ad8bed1a70234b24b299893c5ad6207 316 Gene3D G3DSA:3.20.20.70 11 58 1.3E-14 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0408 1216b7c4aa6b959ee5e77c3e87dcfcb3 380 Gene3D G3DSA:3.20.20.80 83 368 2.8E-92 T 11-10-2018 Clos_0408 1216b7c4aa6b959ee5e77c3e87dcfcb3 380 Pfam PF01476 LysM domain 4 46 2.2E-5 T 11-10-2018 IPR018392 LysM domain Clos_0408 1216b7c4aa6b959ee5e77c3e87dcfcb3 380 Gene3D G3DSA:3.10.50.10 275 333 2.8E-92 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily Clos_0408 1216b7c4aa6b959ee5e77c3e87dcfcb3 380 SMART SM00636 58 362 1.6E-19 T 11-10-2018 IPR011583 Chitinase II GO:0008061 Clos_0408 1216b7c4aa6b959ee5e77c3e87dcfcb3 380 SUPERFAMILY SSF54106 2 46 1.83E-7 T 11-10-2018 Clos_0408 1216b7c4aa6b959ee5e77c3e87dcfcb3 380 Gene3D G3DSA:3.10.350.10 1 59 2.8E-7 T 11-10-2018 IPR036779 LysM domain superfamily Clos_0408 1216b7c4aa6b959ee5e77c3e87dcfcb3 380 Pfam PF00704 Glycosyl hydrolases family 18 85 360 4.4E-20 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Clos_0408 1216b7c4aa6b959ee5e77c3e87dcfcb3 380 SMART SM00257 3 47 4.6E-4 T 11-10-2018 IPR018392 LysM domain Clos_0408 1216b7c4aa6b959ee5e77c3e87dcfcb3 380 SUPERFAMILY SSF51445 74 378 2.34E-42 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Clos_2804 98aa8f69166498625fcd1b52aa84afcb 442 Pfam PF02562 PhoH-like protein 233 439 2.4E-57 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 Clos_2804 98aa8f69166498625fcd1b52aa84afcb 442 SUPERFAMILY SSF88723 2 150 9.22E-12 T 11-10-2018 IPR029060 PIN-like domain superfamily Clos_2804 98aa8f69166498625fcd1b52aa84afcb 442 SMART SM00670 3 135 1.4E-13 T 11-10-2018 IPR002716 PIN domain Clos_2804 98aa8f69166498625fcd1b52aa84afcb 442 Gene3D G3DSA:3.40.50.1010 1 149 6.5E-22 T 11-10-2018 Clos_2804 98aa8f69166498625fcd1b52aa84afcb 442 Pfam PF13638 PIN domain 5 147 9.7E-33 T 11-10-2018 IPR002716 PIN domain Clos_2804 98aa8f69166498625fcd1b52aa84afcb 442 SUPERFAMILY SSF52540 232 419 3.08E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2804 98aa8f69166498625fcd1b52aa84afcb 442 Gene3D G3DSA:3.40.50.300 231 441 3.2E-72 T 11-10-2018 Clos_2414 5f287f1c7285663145064d6d4c5c945f 302 Pfam PF01515 Phosphate acetyl/butaryl transferase 7 75 1.3E-7 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Clos_2414 5f287f1c7285663145064d6d4c5c945f 302 Pfam PF01515 Phosphate acetyl/butaryl transferase 79 293 9.5E-49 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Clos_2414 5f287f1c7285663145064d6d4c5c945f 302 PIRSF PIRSF000428 1 301 1.3E-88 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Clos_2414 5f287f1c7285663145064d6d4c5c945f 302 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 5 297 2.2E-128 T 11-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 Clos_2414 5f287f1c7285663145064d6d4c5c945f 302 Gene3D G3DSA:3.40.718.10 2 300 1.2E-107 T 11-10-2018 Clos_2414 5f287f1c7285663145064d6d4c5c945f 302 SUPERFAMILY SSF53659 4 299 1.36E-66 T 11-10-2018 Clos_1149 c91ac6ca65628db4e6b55ce46f816a13 122 Gene3D G3DSA:2.40.50.660 40 122 1.4E-11 T 11-10-2018 Clos_1149 c91ac6ca65628db4e6b55ce46f816a13 122 Pfam PF10694 Protein of unknown function (DUF2500) 14 119 2.7E-38 T 11-10-2018 IPR019635 Protein of unknown function DUF2500 Clos_1215 a733b967e945b3e06adb30d121dbb4e4 371 Pfam PF00248 Aldo/keto reductase family 9 279 4.8E-43 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Clos_1215 a733b967e945b3e06adb30d121dbb4e4 371 Gene3D G3DSA:3.20.20.100 3 279 3.6E-46 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Clos_1215 a733b967e945b3e06adb30d121dbb4e4 371 SUPERFAMILY SSF46548 288 364 2.79E-14 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Clos_1215 a733b967e945b3e06adb30d121dbb4e4 371 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 343 354 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_1215 a733b967e945b3e06adb30d121dbb4e4 371 Pfam PF13534 4Fe-4S dicluster domain 291 357 1.5E-9 T 11-10-2018 Clos_1215 a733b967e945b3e06adb30d121dbb4e4 371 SUPERFAMILY SSF51430 6 282 5.63E-49 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Clos_1215 a733b967e945b3e06adb30d121dbb4e4 371 Gene3D G3DSA:1.10.1060.10 280 369 3.6E-13 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Clos_0368 0221550f79ed08c23227e0e5e88f136c 125 Pfam PF00936 BMC domain 4 83 5.4E-24 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0368 0221550f79ed08c23227e0e5e88f136c 125 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 53 3.0E-12 T 11-10-2018 Clos_0368 0221550f79ed08c23227e0e5e88f136c 125 SMART SM00877 3 83 6.1E-25 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0368 0221550f79ed08c23227e0e5e88f136c 125 SUPERFAMILY SSF143414 4 92 9.55E-25 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_0368 0221550f79ed08c23227e0e5e88f136c 125 Gene3D G3DSA:3.30.70.1710 1 116 2.2E-34 T 11-10-2018 Clos_1428 ef666dc861bc88eeaa1c3c84f1c8bdfd 310 Gene3D G3DSA:3.10.25.10 206 310 1.0E-33 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Clos_1428 ef666dc861bc88eeaa1c3c84f1c8bdfd 310 SUPERFAMILY SSF50486 204 307 2.83E-30 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Clos_1428 ef666dc861bc88eeaa1c3c84f1c8bdfd 310 SUPERFAMILY SSF53328 1 206 2.22E-72 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Clos_1428 ef666dc861bc88eeaa1c3c84f1c8bdfd 310 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 36.745 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Clos_1428 ef666dc861bc88eeaa1c3c84f1c8bdfd 310 Pfam PF00551 Formyl transferase 1 178 1.3E-45 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Clos_1428 ef666dc861bc88eeaa1c3c84f1c8bdfd 310 Gene3D G3DSA:3.40.50.170 1 205 9.8E-83 T 11-10-2018 Clos_1428 ef666dc861bc88eeaa1c3c84f1c8bdfd 310 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Clos_1428 ef666dc861bc88eeaa1c3c84f1c8bdfd 310 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 300 3.1E-100 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Clos_1428 ef666dc861bc88eeaa1c3c84f1c8bdfd 310 Pfam PF02911 Formyl transferase, C-terminal domain 204 299 6.6E-28 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 Gene3D G3DSA:1.20.120.790 492 626 1.2E-34 T 11-10-2018 IPR037196 HSP90, C-terminal domain Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 Pfam PF00183 Hsp90 protein 184 228 1.2E-6 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 Pfam PF00183 Hsp90 protein 216 625 1.3E-108 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 152 2.6E-11 T 11-10-2018 Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 SUPERFAMILY SSF55874 2 210 1.57E-62 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 SUPERFAMILY SSF54211 236 488 1.21E-78 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 Gene3D G3DSA:3.30.565.10 1 228 2.4E-72 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 SUPERFAMILY SSF110942 511 625 6.02E-28 T 11-10-2018 IPR037196 HSP90, C-terminal domain Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 PIRSF PIRSF002583 1 626 8.9E-199 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 626 26.361 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 Gene3D G3DSA:3.40.50.11260 403 489 3.3E-27 T 11-10-2018 Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 Gene3D G3DSA:3.30.230.80 235 402 5.1E-54 T 11-10-2018 Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 PRINTS PR00775 90kDa heat shock protein signature 2 22 2.4E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 PRINTS PR00775 90kDa heat shock protein signature 115 137 2.4E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 PRINTS PR00775 90kDa heat shock protein signature 23 45 2.4E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 PRINTS PR00775 90kDa heat shock protein signature 72 89 2.4E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 PRINTS PR00775 90kDa heat shock protein signature 165 182 2.4E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 PRINTS PR00775 90kDa heat shock protein signature 188 206 2.4E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Clos_1676 9ead20bd97e360422350bb3488ac88e7 626 PRINTS PR00775 90kDa heat shock protein signature 90 107 2.4E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Clos_0416 1fcec378740caf1bfc31820832444d0d 470 Gene3D G3DSA:3.30.450.20 5 118 1.6E-18 T 11-10-2018 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 SUPERFAMILY SSF46689 369 469 2.11E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 SMART SM00382 177 319 5.7E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0416 1fcec378740caf1bfc31820832444d0d 470 SUPERFAMILY SSF52540 156 398 2.83E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0416 1fcec378740caf1bfc31820832444d0d 470 Pfam PF00989 PAS fold 9 117 1.7E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 Pfam PF00158 Sigma-54 interaction domain 157 323 8.5E-64 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 181 194 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 242 257 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 Gene3D G3DSA:3.40.50.300 142 327 1.1E-60 T 11-10-2018 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 Gene3D G3DSA:1.10.8.60 329 400 7.6E-22 T 11-10-2018 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_0416 1fcec378740caf1bfc31820832444d0d 470 SMART SM00091 8 74 2.5E-4 T 11-10-2018 IPR000014 PAS domain Clos_0416 1fcec378740caf1bfc31820832444d0d 470 SUPERFAMILY SSF55785 8 118 2.79E-15 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0416 1fcec378740caf1bfc31820832444d0d 470 Gene3D G3DSA:1.10.10.60 406 470 2.2E-15 T 11-10-2018 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 127 5.5E-10 T 11-10-2018 IPR000014 PAS domain Clos_0416 1fcec378740caf1bfc31820832444d0d 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 470 3.7E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 3.7E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0416 1fcec378740caf1bfc31820832444d0d 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 464 6.7E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2167 fb210fbba49da173a835ad87d5272230 201 Gene3D G3DSA:3.30.565.40 10 108 3.0E-18 T 11-10-2018 Clos_2167 fb210fbba49da173a835ad87d5272230 201 Pfam PF11738 Protein of unknown function (DUF3298) 112 182 8.2E-16 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 Clos_2167 fb210fbba49da173a835ad87d5272230 201 Pfam PF13739 Domain of unknown function (DUF4163) 18 94 2.9E-12 T 11-10-2018 IPR025303 Deacetylase PdaC Clos_2167 fb210fbba49da173a835ad87d5272230 201 Gene3D G3DSA:3.90.640.20 110 195 1.0E-15 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily Clos_2859 98694188ef11fe7f2c0d0c474a79bcc7 255 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 46 174 1.5E-28 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 Clos_2859 98694188ef11fe7f2c0d0c474a79bcc7 255 Gene3D G3DSA:3.30.200.180 5 249 1.8E-85 T 11-10-2018 Clos_2859 98694188ef11fe7f2c0d0c474a79bcc7 255 SUPERFAMILY SSF55166 43 183 2.46E-25 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Clos_2859 98694188ef11fe7f2c0d0c474a79bcc7 255 Gene3D G3DSA:3.30.1380.10 24 172 1.8E-85 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 26.854 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 Gene3D G3DSA:3.40.50.720 1 164 9.3E-51 T 11-10-2018 Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 SUPERFAMILY SSF48179 161 268 1.02E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 4.9E-36 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.7E-21 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 PIRSF PIRSF000193 2 269 8.5E-86 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 Gene3D G3DSA:1.10.3730.10 165 268 5.7E-35 T 11-10-2018 Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 SUPERFAMILY SSF51735 3 158 5.57E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0129 e18ce13bfeef18ecba9453039dce5881 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 265 6.0E-82 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Clos_0847 57dd78ad10f0f685c8fc3952722a2311 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 329 3.5E-124 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI Clos_0847 57dd78ad10f0f685c8fc3952722a2311 330 SUPERFAMILY SSF51735 118 295 2.25E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0847 57dd78ad10f0f685c8fc3952722a2311 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 4.2E-5 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Clos_0847 57dd78ad10f0f685c8fc3952722a2311 330 Gene3D G3DSA:3.40.50.720 128 297 3.5E-109 T 11-10-2018 Clos_0847 57dd78ad10f0f685c8fc3952722a2311 330 Pfam PF00107 Zinc-binding dehydrogenase 162 274 2.1E-12 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Clos_0847 57dd78ad10f0f685c8fc3952722a2311 330 SUPERFAMILY SSF50129 4 146 3.35E-40 T 11-10-2018 IPR011032 GroES-like superfamily Clos_0847 57dd78ad10f0f685c8fc3952722a2311 330 SMART SM00829 18 327 2.9E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Clos_0847 57dd78ad10f0f685c8fc3952722a2311 330 Gene3D G3DSA:3.90.180.10 20 328 3.5E-109 T 11-10-2018 Clos_0918 9bd9481cd2cc3e9a72d7aa97c54de896 136 Gene3D G3DSA:1.10.10.10 1 81 3.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0918 9bd9481cd2cc3e9a72d7aa97c54de896 136 Gene3D G3DSA:3.30.1490.190 83 136 4.9E-15 T 11-10-2018 Clos_0918 9bd9481cd2cc3e9a72d7aa97c54de896 136 SUPERFAMILY SSF46785 4 133 4.15E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0918 9bd9481cd2cc3e9a72d7aa97c54de896 136 Pfam PF01475 Ferric uptake regulator family 11 128 4.2E-29 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 657 759 1.2E-8 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 SUPERFAMILY SSF52540 31 543 3.61E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 SUPERFAMILY SSF54211 571 765 2.24E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 Gene3D G3DSA:3.40.50.300 5 169 4.0E-25 T 11-10-2018 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 Gene3D G3DSA:3.40.50.300 219 456 1.2E-57 T 11-10-2018 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 654 673 2.3E-14 T 11-10-2018 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 2.3E-14 T 11-10-2018 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 714 732 2.3E-14 T 11-10-2018 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 573 589 2.3E-14 T 11-10-2018 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 684 703 2.3E-14 T 11-10-2018 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 Gene3D G3DSA:3.30.230.10 549 787 3.9E-97 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 Pfam PF13654 AAA domain 26 547 1.8E-194 T 11-10-2018 Clos_1728 3abedd8b5af13126a60fd6491341dbf3 801 Gene3D G3DSA:1.10.8.60 457 544 3.6E-14 T 11-10-2018 Clos_2855 e41c4188159c519ca8cd6482cb05652e 114 SUPERFAMILY SSF82607 19 113 1.11E-31 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Clos_2855 e41c4188159c519ca8cd6482cb05652e 114 Pfam PF02575 YbaB/EbfC DNA-binding family 19 109 3.2E-33 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Clos_2855 e41c4188159c519ca8cd6482cb05652e 114 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 13 107 22.57 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Clos_2855 e41c4188159c519ca8cd6482cb05652e 114 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 11 113 1.9E-26 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Clos_2855 e41c4188159c519ca8cd6482cb05652e 114 Gene3D G3DSA:3.30.1310.10 7 114 1.7E-37 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Clos_2855 e41c4188159c519ca8cd6482cb05652e 114 PIRSF PIRSF004555 11 114 6.4E-40 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Clos_0622 bfc2cc379cbb984347b050021b1c4b13 391 Pfam PF06826 Predicted Permease Membrane Region 219 388 8.3E-32 T 11-10-2018 IPR006512 YidE/YbjL duplication Clos_0622 bfc2cc379cbb984347b050021b1c4b13 391 Pfam PF06826 Predicted Permease Membrane Region 15 190 5.2E-26 T 11-10-2018 IPR006512 YidE/YbjL duplication Clos_0622 bfc2cc379cbb984347b050021b1c4b13 391 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 223 376 3.2E-21 T 11-10-2018 IPR006512 YidE/YbjL duplication Clos_0583 a9789ff997750eee36bd5f6c73b8ce8f 1164 Gene3D G3DSA:1.10.150.870 759 881 4.5E-5 T 11-10-2018 Clos_0583 a9789ff997750eee36bd5f6c73b8ce8f 1164 SUPERFAMILY SSF89550 5 269 2.35E-43 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Clos_0583 a9789ff997750eee36bd5f6c73b8ce8f 1164 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 297 717 4.3E-182 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_0583 a9789ff997750eee36bd5f6c73b8ce8f 1164 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1035 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_0583 a9789ff997750eee36bd5f6c73b8ce8f 1164 Gene3D G3DSA:1.10.10.1600 430 507 1.3E-29 T 11-10-2018 Clos_0583 a9789ff997750eee36bd5f6c73b8ce8f 1164 Gene3D G3DSA:3.20.20.140 1 276 7.1E-116 T 11-10-2018 Clos_0583 a9789ff997750eee36bd5f6c73b8ce8f 1164 Pfam PF02811 PHP domain 7 179 3.0E-53 T 11-10-2018 IPR004013 PHP domain GO:0003824 Clos_0583 a9789ff997750eee36bd5f6c73b8ce8f 1164 SMART SM00481 6 73 1.0E-32 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clos_0583 a9789ff997750eee36bd5f6c73b8ce8f 1164 Pfam PF14579 Helix-hairpin-helix motif 804 893 2.0E-25 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 PRINTS PR00046 Major sigma-70 factor signature 223 238 3.1E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 PRINTS PR00046 Major sigma-70 factor signature 238 249 3.1E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 PRINTS PR00046 Major sigma-70 factor signature 85 93 3.1E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 PRINTS PR00046 Major sigma-70 factor signature 206 218 3.1E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 PRINTS PR00046 Major sigma-70 factor signature 61 74 3.1E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 251 3.5E-37 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 PIRSF PIRSF000770 159 256 7.0E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 PIRSF PIRSF000770 106 153 0.14 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 PIRSF PIRSF000770 5 103 2.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 Gene3D G3DSA:1.20.120.1810 4 104 2.5E-26 T 11-10-2018 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 SUPERFAMILY SSF88659 109 183 7.41E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 Pfam PF04542 Sigma-70 region 2 37 103 1.0E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 32 252 4.9E-83 T 11-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 Gene3D G3DSA:1.10.10.10 105 158 2.5E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 SUPERFAMILY SSF88659 170 255 4.11E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 Pfam PF04539 Sigma-70 region 3 117 179 2.6E-8 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 SUPERFAMILY SSF88946 12 105 3.01E-33 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 Gene3D G3DSA:1.10.10.10 180 256 1.5E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 22 251 1.3E-106 T 11-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_1794 8dfbd22cd98b61e7fd841342997edb36 256 Pfam PF04545 Sigma-70, region 4 202 250 1.8E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1186 24.279 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 SMART SM00968 525 643 6.0E-34 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 PIRSF PIRSF005719 1 1193 0.0 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 Gene3D G3DSA:1.20.1060.20 498 685 7.4E-57 T 11-10-2018 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 Pfam PF06470 SMC proteins Flexible Hinge Domain 525 643 6.9E-29 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 Gene3D G3DSA:1.20.5.170 695 790 1.1E-5 T 11-10-2018 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 Gene3D G3DSA:3.40.50.300 938 1194 5.7E-53 T 11-10-2018 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 Gene3D G3DSA:3.30.70.1620 585 673 7.4E-57 T 11-10-2018 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 Gene3D G3DSA:3.40.50.300 1 242 3.6E-60 T 11-10-2018 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1184 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1177 2.5E-64 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 SUPERFAMILY SSF52540 2 1177 3.26E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1460 aac4b47dfdc1f244070ceefad68e47d2 1194 SUPERFAMILY SSF75553 482 692 3.53E-46 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 Clos_2861 586694ca0dbeda0dcb5bc4c2060f0aab 271 Pfam PF04294 VanW like protein 70 203 2.6E-34 T 11-10-2018 IPR007391 Vancomycin resistance VanW Clos_2702 a94b34db44193313e323908cdb47cdd2 330 Pfam PF04392 ABC transporter substrate binding protein 40 327 9.5E-78 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein Clos_2702 a94b34db44193313e323908cdb47cdd2 330 Gene3D G3DSA:3.40.50.2300 150 318 2.1E-85 T 11-10-2018 Clos_2702 a94b34db44193313e323908cdb47cdd2 330 Gene3D G3DSA:3.40.50.2300 51 300 2.1E-85 T 11-10-2018 Clos_2702 a94b34db44193313e323908cdb47cdd2 330 SUPERFAMILY SSF53822 44 251 1.41E-14 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Clos_2784 c57c1d3bf3034819bdc136e4328198e8 229 Pfam PF00072 Response regulator receiver domain 5 114 8.8E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2784 c57c1d3bf3034819bdc136e4328198e8 229 SUPERFAMILY SSF52172 4 119 6.69E-42 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2784 c57c1d3bf3034819bdc136e4328198e8 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 2.3E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_2784 c57c1d3bf3034819bdc136e4328198e8 229 SMART SM00862 150 226 1.7E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_2784 c57c1d3bf3034819bdc136e4328198e8 229 SMART SM00448 3 113 6.2E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2784 c57c1d3bf3034819bdc136e4328198e8 229 Gene3D G3DSA:1.10.10.10 128 229 6.1E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2784 c57c1d3bf3034819bdc136e4328198e8 229 Gene3D G3DSA:3.40.50.2300 1 123 3.4E-38 T 11-10-2018 Clos_2784 c57c1d3bf3034819bdc136e4328198e8 229 SUPERFAMILY SSF46894 132 227 2.76E-30 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_1558 14c9de1b414ac1850214cb718443dc90 340 Pfam PF05343 M42 glutamyl aminopeptidase 40 326 7.3E-92 T 11-10-2018 IPR008007 Peptidase M42 Clos_1558 14c9de1b414ac1850214cb718443dc90 340 PIRSF PIRSF001123 1 340 7.8E-116 T 11-10-2018 IPR008007 Peptidase M42 Clos_1558 14c9de1b414ac1850214cb718443dc90 340 SUPERFAMILY SSF101821 65 170 7.02E-25 T 11-10-2018 Clos_1558 14c9de1b414ac1850214cb718443dc90 340 SUPERFAMILY SSF53187 2 334 3.14E-63 T 11-10-2018 Clos_1558 14c9de1b414ac1850214cb718443dc90 340 Gene3D G3DSA:2.40.30.40 64 153 3.5E-117 T 11-10-2018 IPR023367 Peptidase M42, domain 2 Clos_1558 14c9de1b414ac1850214cb718443dc90 340 Gene3D G3DSA:3.40.630.10 2 326 3.5E-117 T 11-10-2018 Clos_2075 ff9811ae0520dd7048c7b486141d8f4c 602 SMART SM00283 325 600 9.4E-50 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2075 ff9811ae0520dd7048c7b486141d8f4c 602 Pfam PF17200 Single Cache domain 2 57 217 5.7E-34 T 11-10-2018 IPR033480 Single Cache domain 2 Clos_2075 ff9811ae0520dd7048c7b486141d8f4c 602 Gene3D G3DSA:3.30.450.20 52 212 3.9E-26 T 11-10-2018 Clos_2075 ff9811ae0520dd7048c7b486141d8f4c 602 SMART SM01049 53 157 9.2E-11 T 11-10-2018 IPR033480 Single Cache domain 2 Clos_2075 ff9811ae0520dd7048c7b486141d8f4c 602 Gene3D G3DSA:1.10.287.950 298 600 8.0E-59 T 11-10-2018 Clos_2075 ff9811ae0520dd7048c7b486141d8f4c 602 SUPERFAMILY SSF58104 271 600 1.22E-64 T 11-10-2018 Clos_2075 ff9811ae0520dd7048c7b486141d8f4c 602 Gene3D G3DSA:1.20.1480.50 213 297 6.3E-8 T 11-10-2018 Clos_2075 ff9811ae0520dd7048c7b486141d8f4c 602 SMART SM00304 241 296 0.0029 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_2075 ff9811ae0520dd7048c7b486141d8f4c 602 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 392 547 1.5E-32 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_1783 349baea8f1894cd44aca635b0d329085 216 SUPERFAMILY SSF54211 2 129 6.07E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_1783 349baea8f1894cd44aca635b0d329085 216 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 202 7.2E-64 T 11-10-2018 IPR015796 Impact family, bacterial/archaeal Clos_1783 349baea8f1894cd44aca635b0d329085 216 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site Clos_1783 349baea8f1894cd44aca635b0d329085 216 Pfam PF01205 Uncharacterized protein family UPF0029 20 121 9.0E-32 T 11-10-2018 IPR001498 Impact, N-terminal Clos_1783 349baea8f1894cd44aca635b0d329085 216 Gene3D G3DSA:3.30.230.30 1 132 1.7E-48 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily Clos_1783 349baea8f1894cd44aca635b0d329085 216 Pfam PF09186 Domain of unknown function (DUF1949) 140 195 3.8E-17 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal Clos_1783 349baea8f1894cd44aca635b0d329085 216 SUPERFAMILY SSF54980 135 203 2.28E-14 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_2246 1631de7721332c33502e92b1c0f68f29 423 Pfam PF14501 GHKL domain 314 421 3.4E-17 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Clos_2246 1631de7721332c33502e92b1c0f68f29 423 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 225 277 4.4E-8 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain Clos_2246 1631de7721332c33502e92b1c0f68f29 423 SUPERFAMILY SSF55874 280 421 1.67E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2246 1631de7721332c33502e92b1c0f68f29 423 Gene3D G3DSA:3.30.565.10 269 422 1.5E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2246 1631de7721332c33502e92b1c0f68f29 423 SMART SM00387 313 423 4.2E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0859 bc53ece91f01d00b83fc85e91c03dd84 220 SUPERFAMILY SSF116726 134 218 8.5E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Clos_0859 bc53ece91f01d00b83fc85e91c03dd84 220 Gene3D G3DSA:3.40.50.720 2 140 5.4E-31 T 11-10-2018 Clos_0859 bc53ece91f01d00b83fc85e91c03dd84 220 Pfam PF02080 TrkA-C domain 152 219 1.3E-7 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Clos_0859 bc53ece91f01d00b83fc85e91c03dd84 220 SUPERFAMILY SSF51735 7 130 9.81E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0859 bc53ece91f01d00b83fc85e91c03dd84 220 Pfam PF02254 TrkA-N domain 8 123 6.3E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Clos_0859 bc53ece91f01d00b83fc85e91c03dd84 220 Gene3D G3DSA:3.30.70.1450 141 218 1.2E-17 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Clos_1812 c1f975dcc487e8bcd1867d0701a4140a 159 Gene3D G3DSA:3.30.70.640 1 159 6.6E-67 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1812 c1f975dcc487e8bcd1867d0701a4140a 159 SUPERFAMILY SSF55040 11 155 2.22E-59 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1812 c1f975dcc487e8bcd1867d0701a4140a 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.866 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1812 c1f975dcc487e8bcd1867d0701a4140a 159 Pfam PF01967 MoaC family 15 150 6.7E-54 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1812 c1f975dcc487e8bcd1867d0701a4140a 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 5.3E-61 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1166 4539662c756f97f57eea8e731cd8577f 608 Pfam PF01432 Peptidase family M3 211 591 1.7E-70 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Clos_1166 4539662c756f97f57eea8e731cd8577f 608 SUPERFAMILY SSF55486 15 590 8.03E-127 T 11-10-2018 Clos_1166 4539662c756f97f57eea8e731cd8577f 608 Gene3D G3DSA:1.10.1370.20 235 607 1.6E-134 T 11-10-2018 Clos_1166 4539662c756f97f57eea8e731cd8577f 608 Gene3D G3DSA:1.20.140.70 32 186 8.7E-53 T 11-10-2018 Clos_1166 4539662c756f97f57eea8e731cd8577f 608 Pfam PF08439 Oligopeptidase F 121 190 9.5E-26 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Clos_1166 4539662c756f97f57eea8e731cd8577f 608 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 15 603 1.1E-200 T 11-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 Clos_1166 4539662c756f97f57eea8e731cd8577f 608 Gene3D G3DSA:1.10.287.830 188 234 4.8E-20 T 11-10-2018 Clos_0705 fc2b76a5742232cd6ab24159b14b11c0 244 Gene3D G3DSA:3.40.50.300 1 243 6.0E-64 T 11-10-2018 Clos_0705 fc2b76a5742232cd6ab24159b14b11c0 244 SUPERFAMILY SSF52540 3 226 1.47E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0705 fc2b76a5742232cd6ab24159b14b11c0 244 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0705 fc2b76a5742232cd6ab24159b14b11c0 244 Pfam PF00005 ABC transporter 19 162 1.4E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0705 fc2b76a5742232cd6ab24159b14b11c0 244 SMART SM00382 28 213 5.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1571 2e3890400fcb21a82cf7a68fd4015e93 379 Gene3D G3DSA:3.40.50.970 1 195 2.0E-77 T 11-10-2018 Clos_1571 2e3890400fcb21a82cf7a68fd4015e93 379 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 277 371 6.9E-22 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clos_1571 2e3890400fcb21a82cf7a68fd4015e93 379 SUPERFAMILY SSF52518 4 259 4.71E-72 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_1571 2e3890400fcb21a82cf7a68fd4015e93 379 SUPERFAMILY SSF52922 269 378 5.71E-23 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_1571 2e3890400fcb21a82cf7a68fd4015e93 379 Gene3D G3DSA:3.40.50.920 265 379 2.5E-23 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_1571 2e3890400fcb21a82cf7a68fd4015e93 379 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 247 2.1E-71 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Clos_1788 80328c20e5ecc588b5340f2fd1a311d4 857 Gene3D G3DSA:3.90.1310.20 71 615 2.0E-178 T 11-10-2018 Clos_1788 80328c20e5ecc588b5340f2fd1a311d4 857 SUPERFAMILY SSF56601 266 781 1.2E-106 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_1788 80328c20e5ecc588b5340f2fd1a311d4 857 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 88 704 3.8E-158 T 11-10-2018 Clos_1788 80328c20e5ecc588b5340f2fd1a311d4 857 Gene3D G3DSA:3.40.710.10 354 715 2.0E-178 T 11-10-2018 Clos_1788 80328c20e5ecc588b5340f2fd1a311d4 857 SUPERFAMILY SSF53955 65 304 3.09E-62 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Clos_1788 80328c20e5ecc588b5340f2fd1a311d4 857 Pfam PF00912 Transglycosylase 76 250 2.2E-55 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_1788 80328c20e5ecc588b5340f2fd1a311d4 857 Gene3D G3DSA:1.10.3810.10 86 305 2.0E-178 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_1788 80328c20e5ecc588b5340f2fd1a311d4 857 Pfam PF00905 Penicillin binding protein transpeptidase domain 408 699 7.1E-39 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Clos_0170 7786b97f86785c03ce1507e5bdbddf06 346 PIRSF PIRSF000089 14 343 7.2E-118 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Clos_0170 7786b97f86785c03ce1507e5bdbddf06 346 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 218 301 1.1E-36 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Clos_0170 7786b97f86785c03ce1507e5bdbddf06 346 SUPERFAMILY SSF52467 218 338 2.84E-47 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clos_0170 7786b97f86785c03ce1507e5bdbddf06 346 Gene3D G3DSA:3.40.50.1220 216 345 2.2E-58 T 11-10-2018 Clos_0170 7786b97f86785c03ce1507e5bdbddf06 346 Gene3D G3DSA:3.40.50.620 14 215 1.9E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0170 7786b97f86785c03ce1507e5bdbddf06 346 SUPERFAMILY SSF52402 12 251 3.21E-53 T 11-10-2018 Clos_0170 7786b97f86785c03ce1507e5bdbddf06 346 SMART SM00893 18 207 3.4E-54 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0170 7786b97f86785c03ce1507e5bdbddf06 346 Pfam PF01012 Electron transfer flavoprotein domain 18 197 2.1E-44 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_2362 fad96c347550a302187bdc1dad49db47 505 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_2362 fad96c347550a302187bdc1dad49db47 505 Pfam PF02954 Bacterial regulatory protein, Fis family 462 499 1.2E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2362 fad96c347550a302187bdc1dad49db47 505 Gene3D G3DSA:3.40.50.300 180 365 1.9E-66 T 11-10-2018 Clos_2362 fad96c347550a302187bdc1dad49db47 505 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 54 122 2.7E-6 T 11-10-2018 IPR000014 PAS domain Clos_2362 fad96c347550a302187bdc1dad49db47 505 Pfam PF00158 Sigma-54 interaction domain 194 362 6.0E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_2362 fad96c347550a302187bdc1dad49db47 505 SUPERFAMILY SSF55785 50 151 1.15E-9 T 11-10-2018 IPR035965 PAS domain superfamily Clos_2362 fad96c347550a302187bdc1dad49db47 505 SUPERFAMILY SSF52540 193 439 3.28E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2362 fad96c347550a302187bdc1dad49db47 505 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 408 417 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_2362 fad96c347550a302187bdc1dad49db47 505 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 281 296 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_2362 fad96c347550a302187bdc1dad49db47 505 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 484 504 8.2E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2362 fad96c347550a302187bdc1dad49db47 505 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 484 8.2E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2362 fad96c347550a302187bdc1dad49db47 505 SUPERFAMILY SSF46689 408 504 4.12E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2362 fad96c347550a302187bdc1dad49db47 505 Gene3D G3DSA:1.10.8.60 366 433 7.4E-23 T 11-10-2018 Clos_2362 fad96c347550a302187bdc1dad49db47 505 Gene3D G3DSA:1.10.10.60 434 505 9.9E-17 T 11-10-2018 Clos_2362 fad96c347550a302187bdc1dad49db47 505 Gene3D G3DSA:3.30.450.20 45 157 1.8E-12 T 11-10-2018 Clos_2362 fad96c347550a302187bdc1dad49db47 505 SMART SM00382 214 358 3.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2470 cf3ceb2f519bcc6e521a07323e184321 152 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 130 2.2E-38 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Clos_2470 cf3ceb2f519bcc6e521a07323e184321 152 Gene3D G3DSA:3.40.50.300 2 150 1.1E-42 T 11-10-2018 Clos_2470 cf3ceb2f519bcc6e521a07323e184321 152 SUPERFAMILY SSF52540 12 126 1.82E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2470 cf3ceb2f519bcc6e521a07323e184321 152 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 127 3.3E-39 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Clos_2598 1417fee22efa035b8dd80d4bcec7fa10 126 Pfam PF03061 Thioesterase superfamily 23 87 2.3E-6 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Clos_2598 1417fee22efa035b8dd80d4bcec7fa10 126 Gene3D G3DSA:3.10.129.10 1 126 5.4E-38 T 11-10-2018 Clos_2598 1417fee22efa035b8dd80d4bcec7fa10 126 SUPERFAMILY SSF54637 4 125 1.79E-17 T 11-10-2018 IPR029069 HotDog domain superfamily Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 Pfam PF00455 DeoR C terminal sensor domain 75 232 6.7E-49 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.5E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.5E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 7.7E-18 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 SMART SM01134 73 234 4.4E-64 T 11-10-2018 Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 SUPERFAMILY SSF100950 74 234 4.81E-33 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 SUPERFAMILY SSF46785 5 78 1.4E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 Gene3D G3DSA:1.10.10.10 1 56 4.5E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2546 2d0f3a465d53f6e400cca6eff094cd14 253 SMART SM00420 6 58 4.8E-18 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 5 78 21.047 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 4.5E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 4.5E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 4.5E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 4.5E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 Pfam PF01084 Ribosomal protein S18 23 73 8.8E-27 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 26 78 2.0E-20 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 SUPERFAMILY SSF46911 2 77 5.75E-30 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 Gene3D G3DSA:4.10.640.10 1 78 1.3E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 77 6.4E-33 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0037 2d23c1bba72afbdc73c1268955c64ecd 78 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0048 a88b33beb15115c124266d390a348293 622 Gene3D G3DSA:3.40.50.300 311 497 1.6E-63 T 11-10-2018 Clos_0048 a88b33beb15115c124266d390a348293 622 SUPERFAMILY SSF46689 570 620 4.35E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0048 a88b33beb15115c124266d390a348293 622 Pfam PF00158 Sigma-54 interaction domain 326 492 9.2E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0048 a88b33beb15115c124266d390a348293 622 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 349 362 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0048 a88b33beb15115c124266d390a348293 622 Gene3D G3DSA:3.40.50.10660 79 169 2.3E-23 T 11-10-2018 Clos_0048 a88b33beb15115c124266d390a348293 622 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 412 427 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_0048 a88b33beb15115c124266d390a348293 622 SUPERFAMILY SSF52540 324 553 7.11E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0048 a88b33beb15115c124266d390a348293 622 SUPERFAMILY SSF55785 195 298 5.76E-10 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0048 a88b33beb15115c124266d390a348293 622 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 197 306 1.1E-6 T 11-10-2018 IPR000014 PAS domain Clos_0048 a88b33beb15115c124266d390a348293 622 Gene3D G3DSA:1.10.8.60 498 575 3.8E-16 T 11-10-2018 Clos_0048 a88b33beb15115c124266d390a348293 622 Gene3D G3DSA:3.40.50.2300 5 184 2.3E-23 T 11-10-2018 Clos_0048 a88b33beb15115c124266d390a348293 622 Gene3D G3DSA:3.30.450.20 186 297 2.8E-15 T 11-10-2018 Clos_0048 a88b33beb15115c124266d390a348293 622 Pfam PF00989 PAS fold 200 297 7.1E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_0048 a88b33beb15115c124266d390a348293 622 SUPERFAMILY SSF159800 3 187 1.14E-38 T 11-10-2018 Clos_0048 a88b33beb15115c124266d390a348293 622 SMART SM00382 345 490 3.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0048 a88b33beb15115c124266d390a348293 622 SMART SM00091 197 265 1.9E-4 T 11-10-2018 IPR000014 PAS domain Clos_0048 a88b33beb15115c124266d390a348293 622 Pfam PF06506 Propionate catabolism activator 49 187 1.6E-21 T 11-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.0E-61 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 Gene3D G3DSA:3.90.1170.10 1 147 1.0E-57 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 SUPERFAMILY SSF54686 1 138 9.16E-61 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.0E-53 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.7E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.7E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.7E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.7E-39 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.012 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0499 293eb5a883889667fc7289c7edf091d3 147 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 Gene3D G3DSA:2.40.50.140 1 108 5.0E-34 T 11-10-2018 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 585 35.252 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 559 4.6E-113 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 Pfam PF02938 GAD domain 312 406 7.0E-33 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 Gene3D G3DSA:3.30.1360.30 276 420 5.1E-201 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 SUPERFAMILY SSF50249 2 111 5.33E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 585 1.0E-256 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 SUPERFAMILY SSF55261 293 419 9.65E-43 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 Gene3D G3DSA:3.30.930.10 120 582 5.1E-201 T 11-10-2018 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 Pfam PF01336 OB-fold nucleic acid binding domain 21 104 1.0E-16 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 2.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 2.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 2.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 2.3E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1709 467386af13ae6ab24fc15c9740174eb9 588 SUPERFAMILY SSF55681 110 584 5.94E-110 T 11-10-2018 Clos_2357 0eeec7f9edd3162e629d29cb6c9e3ddb 177 Pfam PF14317 YcxB-like protein 115 175 5.0E-6 T 11-10-2018 IPR025588 YcxB-like protein Clos_2679 4550859ae857ddd2988294b3c3940091 147 SMART SM00347 26 126 2.8E-23 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2679 4550859ae857ddd2988294b3c3940091 147 Gene3D G3DSA:1.10.10.10 1 146 7.4E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2679 4550859ae857ddd2988294b3c3940091 147 SUPERFAMILY SSF46785 7 143 1.94E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2679 4550859ae857ddd2988294b3c3940091 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 2.5E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2679 4550859ae857ddd2988294b3c3940091 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 2.5E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2679 4550859ae857ddd2988294b3c3940091 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 2.5E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2679 4550859ae857ddd2988294b3c3940091 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 2.5E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2679 4550859ae857ddd2988294b3c3940091 147 Pfam PF01047 MarR family 37 90 6.7E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 2.1E-71 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 5.3E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 5.3E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 5.3E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 5.3E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 5.3E-44 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 SUPERFAMILY SSF55347 154 316 6.85E-74 T 11-10-2018 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 4.9E-137 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 SUPERFAMILY SSF51735 4 170 3.24E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 Gene3D G3DSA:3.30.360.10 153 317 1.2E-152 T 11-10-2018 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 PIRSF PIRSF000149 1 336 1.0E-139 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 103 2.7E-34 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 SMART SM00846 3 154 7.5E-84 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0716 24feec0d05ef2cd38bf7f4dd97a8ad12 337 Gene3D G3DSA:3.40.50.720 4 331 1.2E-152 T 11-10-2018 Clos_0172 7a203a971fe4e9a63f5b86d12d6217d3 308 Pfam PF11155 Domain of unknown function (DUF2935) 9 176 1.8E-44 T 11-10-2018 IPR021328 Protein of unknown function DUF2935 Clos_0172 7a203a971fe4e9a63f5b86d12d6217d3 308 Pfam PF11155 Domain of unknown function (DUF2935) 190 302 5.0E-34 T 11-10-2018 IPR021328 Protein of unknown function DUF2935 Clos_0172 7a203a971fe4e9a63f5b86d12d6217d3 308 SUPERFAMILY SSF158430 8 189 1.83E-40 T 11-10-2018 Clos_0172 7a203a971fe4e9a63f5b86d12d6217d3 308 SUPERFAMILY SSF158430 182 306 1.57E-36 T 11-10-2018 Clos_0172 7a203a971fe4e9a63f5b86d12d6217d3 308 Gene3D G3DSA:1.20.1260.120 105 308 1.9E-61 T 11-10-2018 Clos_0172 7a203a971fe4e9a63f5b86d12d6217d3 308 Gene3D G3DSA:1.20.1260.120 1 72 1.2E-14 T 11-10-2018 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 SMART SM00091 327 393 1.3E-6 T 11-10-2018 IPR000014 PAS domain Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 Pfam PF08448 PAS fold 334 435 1.7E-6 T 11-10-2018 IPR013656 PAS fold-4 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 SUPERFAMILY SSF53850 46 275 2.17E-47 T 11-10-2018 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 SUPERFAMILY SSF55874 506 664 3.67E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 SUPERFAMILY SSF55785 318 426 4.36E-14 T 11-10-2018 IPR035965 PAS domain superfamily Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 Gene3D G3DSA:3.30.565.10 512 664 6.8E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 SMART SM00388 451 517 1.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 Gene3D G3DSA:3.40.190.10 44 270 6.8E-56 T 11-10-2018 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 272 9.1E-46 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 SMART SM00387 558 666 1.1E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 Gene3D G3DSA:3.30.450.20 309 438 1.4E-14 T 11-10-2018 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 560 664 1.5E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 SMART SM00062 53 274 7.8E-35 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 330 437 1.3E-7 T 11-10-2018 IPR000014 PAS domain Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 2.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 2.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 609 2.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 623 2.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 Gene3D G3DSA:1.10.287.130 443 511 2.8E-19 T 11-10-2018 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 Pfam PF00512 His Kinase A (phospho-acceptor) domain 453 515 1.7E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 Gene3D G3DSA:3.40.190.10 138 232 6.8E-56 T 11-10-2018 Clos_2826 806ef00a660bc4600f5f68e36e3ff0a5 669 SUPERFAMILY SSF47384 447 515 1.96E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_2326 e081d137ecf24dd975de196a512e5021 629 Pfam PF13519 von Willebrand factor type A domain 446 553 8.7E-15 T 11-10-2018 IPR002035 von Willebrand factor, type A Clos_2326 e081d137ecf24dd975de196a512e5021 629 Gene3D G3DSA:1.10.8.80 215 304 3.8E-16 T 11-10-2018 Clos_2326 e081d137ecf24dd975de196a512e5021 629 SUPERFAMILY SSF53300 441 613 2.78E-23 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_2326 e081d137ecf24dd975de196a512e5021 629 SUPERFAMILY SSF52540 4 285 3.0E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2326 e081d137ecf24dd975de196a512e5021 629 Gene3D G3DSA:3.40.50.410 437 623 7.3E-21 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_2326 e081d137ecf24dd975de196a512e5021 629 Pfam PF07728 AAA domain (dynein-related subfamily) 33 163 3.2E-12 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Clos_2326 e081d137ecf24dd975de196a512e5021 629 Gene3D G3DSA:3.40.50.300 5 169 5.1E-44 T 11-10-2018 Clos_2326 e081d137ecf24dd975de196a512e5021 629 SMART SM00327 443 623 1.2E-17 T 11-10-2018 IPR002035 von Willebrand factor, type A Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 Pfam PF16326 ABC transporter C-terminal domain 574 637 6.4E-9 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 Pfam PF12848 ABC transporter 235 320 3.1E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 SUPERFAMILY SSF52540 4 242 3.06E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 Gene3D G3DSA:3.40.50.300 3 290 6.1E-68 T 11-10-2018 Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 Gene3D G3DSA:1.10.287.380 565 640 2.5E-6 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 SUPERFAMILY SSF52540 312 537 1.7E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 Pfam PF00005 ABC transporter 350 479 1.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 SMART SM00382 358 523 2.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 SMART SM00382 28 243 1.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 Gene3D G3DSA:3.40.50.300 295 562 3.1E-63 T 11-10-2018 Clos_2465 102870d780582c21ae2caf5fb9c6aeec 640 Pfam PF00005 ABC transporter 19 196 7.5E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 Gene3D G3DSA:3.20.20.70 1 290 1.8E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 286 64.984 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 1.5E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 1.5E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 1.5E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 1.5E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 285 9.4E-110 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 PIRSF PIRSF001365 1 289 1.7E-94 T 11-10-2018 IPR002220 DapA-like GO:0016829 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 SUPERFAMILY SSF51569 1 287 1.99E-100 T 11-10-2018 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 5.0E-97 T 11-10-2018 IPR002220 DapA-like GO:0016829 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_1163 a3e46b2b23bf262d7af8f9024706ca78 290 SMART SM01130 1 288 3.6E-133 T 11-10-2018 IPR002220 DapA-like GO:0016829 Clos_0426 cf5a67ad317b04a3a92db7533af4662a 241 Pfam PF04397 LytTr DNA-binding domain 144 233 3.7E-21 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_0426 cf5a67ad317b04a3a92db7533af4662a 241 Gene3D G3DSA:3.40.50.2300 1 132 9.6E-28 T 11-10-2018 Clos_0426 cf5a67ad317b04a3a92db7533af4662a 241 Pfam PF00072 Response regulator receiver domain 6 114 2.1E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0426 cf5a67ad317b04a3a92db7533af4662a 241 SUPERFAMILY SSF52172 3 149 3.42E-24 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0426 cf5a67ad317b04a3a92db7533af4662a 241 SMART SM00850 142 236 4.2E-23 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_0426 cf5a67ad317b04a3a92db7533af4662a 241 SMART SM00448 3 116 2.9E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0426 cf5a67ad317b04a3a92db7533af4662a 241 Gene3D G3DSA:2.40.50.1020 133 231 8.0E-22 T 11-10-2018 Clos_2224 a44732fe2cef7fc239d629ae8e476138 241 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Clos_2224 a44732fe2cef7fc239d629ae8e476138 241 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 13 228 4.5E-22 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Clos_2224 a44732fe2cef7fc239d629ae8e476138 241 SUPERFAMILY SSF100950 1 240 5.58E-94 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_2224 a44732fe2cef7fc239d629ae8e476138 241 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 4 240 1.8E-89 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Clos_2224 a44732fe2cef7fc239d629ae8e476138 241 Gene3D G3DSA:3.40.50.1360 1 241 5.9E-96 T 11-10-2018 Clos_2224 a44732fe2cef7fc239d629ae8e476138 241 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 42.341 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 Clos_0447 ee5fb14168066780621cc5e2a777a883 324 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Clos_0447 ee5fb14168066780621cc5e2a777a883 324 Pfam PF01207 Dihydrouridine synthase (Dus) 14 313 7.6E-99 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Clos_0447 ee5fb14168066780621cc5e2a777a883 324 Gene3D G3DSA:3.20.20.70 6 248 1.9E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0447 ee5fb14168066780621cc5e2a777a883 324 SUPERFAMILY SSF51395 10 317 1.87E-89 T 11-10-2018 Clos_0447 ee5fb14168066780621cc5e2a777a883 324 Gene3D G3DSA:1.10.1200.80 251 323 2.7E-21 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 Clos_0447 ee5fb14168066780621cc5e2a777a883 324 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 2.9E-121 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Clos_0447 ee5fb14168066780621cc5e2a777a883 324 PIRSF PIRSF006621 1 323 8.2E-106 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Clos_0574 553d6b8afe4c16ed03f86d594b519503 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 284 40.967 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 Clos_0574 553d6b8afe4c16ed03f86d594b519503 290 Pfam PF03668 P-loop ATPase protein family 1 281 6.3E-105 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 Clos_0574 553d6b8afe4c16ed03f86d594b519503 290 PIRSF PIRSF005052 1 285 6.8E-108 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 Clos_0574 553d6b8afe4c16ed03f86d594b519503 290 SUPERFAMILY SSF52540 1 152 1.47E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0574 553d6b8afe4c16ed03f86d594b519503 290 Gene3D G3DSA:3.40.50.300 38 162 1.3E-6 T 11-10-2018 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 Gene3D G3DSA:3.90.640.10 183 256 5.8E-135 T 11-10-2018 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 SUPERFAMILY SSF53067 7 145 1.94E-44 T 11-10-2018 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 7 333 1.7E-159 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 SUPERFAMILY SSF53067 146 326 2.15E-50 T 11-10-2018 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 Gene3D G3DSA:3.30.420.40 151 314 5.8E-135 T 11-10-2018 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 Pfam PF06723 MreB/Mbl protein 9 333 3.3E-155 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 66 89 8.5E-64 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 46 64 8.5E-64 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 8.5E-64 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 8.5E-64 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 8.5E-64 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_1765 1d575640bc341a7266f147e68dd41b59 343 Gene3D G3DSA:3.30.420.40 11 324 5.8E-135 T 11-10-2018 Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 306 324 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 SUPERFAMILY SSF53335 1 328 7.98E-91 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 64 76 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 103 117 2.7E-17 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 151 164 2.7E-17 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 2.7E-17 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 Gene3D G3DSA:3.40.50.150 4 322 7.8E-124 T 11-10-2018 Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 Gene3D G3DSA:3.90.120.10 146 315 7.8E-124 T 11-10-2018 Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 325 1.1E-102 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_1855 1c6c78952fb8e9e49d11b8ac53c5a538 329 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 4 324 1.0E-79 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_0967 5137a8335eebadaba37645876b52918b 461 Pfam PF04552 Sigma-54, DNA binding domain 302 460 3.8E-66 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Clos_0967 5137a8335eebadaba37645876b52918b 461 Pfam PF04963 Sigma-54 factor, core binding domain 100 287 9.3E-53 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Clos_0967 5137a8335eebadaba37645876b52918b 461 Gene3D G3DSA:1.10.10.60 401 459 5.1E-24 T 11-10-2018 Clos_0967 5137a8335eebadaba37645876b52918b 461 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Clos_0967 5137a8335eebadaba37645876b52918b 461 Gene3D G3DSA:1.10.10.1330 106 218 9.2E-25 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Clos_0967 5137a8335eebadaba37645876b52918b 461 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 50 3.9E-17 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Clos_0967 5137a8335eebadaba37645876b52918b 461 PIRSF PIRSF000774 1 461 2.0E-153 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Clos_0967 5137a8335eebadaba37645876b52918b 461 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 459 7.0E-134 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Clos_0967 5137a8335eebadaba37645876b52918b 461 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 440 447 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Clos_0967 5137a8335eebadaba37645876b52918b 461 PRINTS PR00045 Sigma-54 factor signature 377 388 4.6E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Clos_0967 5137a8335eebadaba37645876b52918b 461 PRINTS PR00045 Sigma-54 factor signature 361 373 4.6E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Clos_0967 5137a8335eebadaba37645876b52918b 461 PRINTS PR00045 Sigma-54 factor signature 435 453 4.6E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Clos_0967 5137a8335eebadaba37645876b52918b 461 PRINTS PR00045 Sigma-54 factor signature 173 190 4.6E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Clos_0628 2de8194b681caf1add8eceb1d3e2b9bb 393 SUPERFAMILY SSF53822 61 286 1.93E-5 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Clos_0628 2de8194b681caf1add8eceb1d3e2b9bb 393 Pfam PF12683 Protein of unknown function (DUF3798) 46 316 4.0E-126 T 11-10-2018 IPR024258 Protein of unknown function DUF3798 Clos_0628 2de8194b681caf1add8eceb1d3e2b9bb 393 Gene3D G3DSA:3.40.50.11390 157 306 2.4E-72 T 11-10-2018 Clos_0628 2de8194b681caf1add8eceb1d3e2b9bb 393 Gene3D G3DSA:3.40.50.11400 46 156 2.4E-72 T 11-10-2018 Clos_0298 2bc66db4741aa794a6c21d4437412caa 503 SUPERFAMILY SSF53623 99 339 8.13E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_0298 2bc66db4741aa794a6c21d4437412caa 503 SUPERFAMILY SSF63418 1 99 5.49E-22 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Clos_0298 2bc66db4741aa794a6c21d4437412caa 503 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 475 1.3E-85 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Clos_0298 2bc66db4741aa794a6c21d4437412caa 503 Gene3D G3DSA:3.40.1390.10 2 98 2.8E-26 T 11-10-2018 Clos_0298 2bc66db4741aa794a6c21d4437412caa 503 Gene3D G3DSA:3.40.1190.10 99 344 2.5E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_0298 2bc66db4741aa794a6c21d4437412caa 503 Pfam PF01225 Mur ligase family, catalytic domain 23 96 1.0E-8 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Clos_0298 2bc66db4741aa794a6c21d4437412caa 503 Pfam PF08245 Mur ligase middle domain 108 319 1.2E-43 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Clos_0298 2bc66db4741aa794a6c21d4437412caa 503 SUPERFAMILY SSF53244 339 488 9.52E-9 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_1035 5cb025f66ce120c927e27ff57888a167 124 SMART SM00347 1 98 2.6E-27 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1035 5cb025f66ce120c927e27ff57888a167 124 PRINTS PR00598 Bacterial regulatory protein MarR family signature 39 54 1.3E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1035 5cb025f66ce120c927e27ff57888a167 124 PRINTS PR00598 Bacterial regulatory protein MarR family signature 22 38 1.3E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1035 5cb025f66ce120c927e27ff57888a167 124 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 108 1.3E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1035 5cb025f66ce120c927e27ff57888a167 124 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 1.3E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1035 5cb025f66ce120c927e27ff57888a167 124 ProSitePatterns PS01117 MarR-type HTH domain signature. 37 71 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Clos_1035 5cb025f66ce120c927e27ff57888a167 124 SUPERFAMILY SSF46785 2 117 6.83E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1035 5cb025f66ce120c927e27ff57888a167 124 Pfam PF01047 MarR family 6 62 6.9E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1035 5cb025f66ce120c927e27ff57888a167 124 Gene3D G3DSA:1.10.10.10 1 120 2.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0837 42a8fc018954a2092ebaa4dde6b6f4fc 367 Pfam PF14286 DHHW protein 187 328 1.5E-11 T 11-10-2018 IPR025945 DHHW protein Clos_0581 9cf253f9327f80365af83a494836da78 699 SUPERFAMILY SSF53187 29 458 1.41E-29 T 11-10-2018 Clos_0581 9cf253f9327f80365af83a494836da78 699 Pfam PF04389 Peptidase family M28 254 452 6.6E-11 T 11-10-2018 IPR007484 Peptidase M28 Clos_0581 9cf253f9327f80365af83a494836da78 699 Gene3D G3DSA:3.40.630.10 223 462 1.4E-19 T 11-10-2018 Clos_0581 9cf253f9327f80365af83a494836da78 699 Gene3D G3DSA:3.40.630.10 25 104 2.0E-8 T 11-10-2018 Clos_2302 97be83fb669348b6613853d6a2ee0cf5 502 Gene3D G3DSA:1.20.1570.10 206 334 4.0E-164 T 11-10-2018 Clos_2302 97be83fb669348b6613853d6a2ee0cf5 502 Hamap MF_01567 UPF0371 protein . 1 502 57.718 T 11-10-2018 IPR014999 Uncharacterised protein family UPF0371 Clos_2302 97be83fb669348b6613853d6a2ee0cf5 502 Gene3D G3DSA:3.10.630.10 4 284 4.0E-164 T 11-10-2018 Clos_2302 97be83fb669348b6613853d6a2ee0cf5 502 Gene3D G3DSA:3.40.140.40 342 494 2.3E-52 T 11-10-2018 Clos_2302 97be83fb669348b6613853d6a2ee0cf5 502 PIRSF PIRSF033132 1 502 1.6E-260 T 11-10-2018 IPR014999 Uncharacterised protein family UPF0371 Clos_2302 97be83fb669348b6613853d6a2ee0cf5 502 Pfam PF08903 Domain of unknown function (DUF1846) 4 499 3.6E-236 T 11-10-2018 IPR014999 Uncharacterised protein family UPF0371 Clos_2464 b92e4d44d7a4c0615043a29e040d583f 217 Gene3D G3DSA:1.10.10.10 3 79 4.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2464 b92e4d44d7a4c0615043a29e040d583f 217 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 4 212 34.591 T 11-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 Clos_2464 b92e4d44d7a4c0615043a29e040d583f 217 Pfam PF06971 Putative DNA-binding protein N-terminus 8 56 1.4E-20 T 11-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 Clos_2464 b92e4d44d7a4c0615043a29e040d583f 217 Pfam PF02629 CoA binding domain 84 181 9.4E-20 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Clos_2464 b92e4d44d7a4c0615043a29e040d583f 217 SMART SM00881 82 183 9.1E-14 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Clos_2464 b92e4d44d7a4c0615043a29e040d583f 217 SUPERFAMILY SSF51735 84 209 1.77E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_2464 b92e4d44d7a4c0615043a29e040d583f 217 Gene3D G3DSA:3.40.50.720 80 217 1.6E-44 T 11-10-2018 Clos_2464 b92e4d44d7a4c0615043a29e040d583f 217 SUPERFAMILY SSF46785 12 82 2.11E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0672 89300dccaadd57e9a4e230cbca93b296 530 SMART SM00382 344 512 2.4 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0672 89300dccaadd57e9a4e230cbca93b296 530 SMART SM00382 26 226 8.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0672 89300dccaadd57e9a4e230cbca93b296 530 SUPERFAMILY SSF52540 2 255 3.01E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0672 89300dccaadd57e9a4e230cbca93b296 530 Pfam PF00005 ABC transporter 18 184 5.7E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0672 89300dccaadd57e9a4e230cbca93b296 530 Gene3D G3DSA:3.40.50.300 286 530 3.7E-43 T 11-10-2018 Clos_0672 89300dccaadd57e9a4e230cbca93b296 530 SUPERFAMILY SSF52540 296 513 1.15E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0672 89300dccaadd57e9a4e230cbca93b296 530 Gene3D G3DSA:3.40.50.300 2 279 8.4E-60 T 11-10-2018 Clos_0672 89300dccaadd57e9a4e230cbca93b296 530 Pfam PF00005 ABC transporter 335 467 7.7E-13 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0672 89300dccaadd57e9a4e230cbca93b296 530 Pfam PF12848 ABC transporter 223 302 3.8E-20 T 11-10-2018 IPR032781 ABC-transporter extension domain Clos_2016 19668597ab02ea11b1e13d4d08027c74 222 SUPERFAMILY SSF50249 9 208 1.24E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_2016 19668597ab02ea11b1e13d4d08027c74 222 Gene3D G3DSA:2.40.50.140 2 100 2.4E-13 T 11-10-2018 Clos_2016 19668597ab02ea11b1e13d4d08027c74 222 Gene3D G3DSA:2.40.50.140 103 210 1.5E-24 T 11-10-2018 Clos_2016 19668597ab02ea11b1e13d4d08027c74 222 Pfam PF00436 Single-strand binding protein family 111 206 2.7E-15 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Clos_0255 60a5e9cee73dc57e9e8a52936c0c0cd9 310 Gene3D G3DSA:1.20.58.1130 9 199 4.3E-87 T 11-10-2018 Clos_0255 60a5e9cee73dc57e9e8a52936c0c0cd9 310 Pfam PF01699 Sodium/calcium exchanger protein 6 144 2.4E-25 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Clos_0255 60a5e9cee73dc57e9e8a52936c0c0cd9 310 Pfam PF01699 Sodium/calcium exchanger protein 167 307 4.0E-27 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Clos_0255 60a5e9cee73dc57e9e8a52936c0c0cd9 310 Gene3D G3DSA:1.20.1420.30 36 300 4.3E-87 T 11-10-2018 Clos_0255 60a5e9cee73dc57e9e8a52936c0c0cd9 310 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 302 1.1E-71 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 Clos_2611 37512e0480593316204b791f7cbacce0 1037 Gene3D G3DSA:3.30.2090.10 711 799 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Clos_2611 37512e0480593316204b791f7cbacce0 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.3E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 6.3E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 PRINTS PR00702 Acriflavin resistance protein family signature 354 375 6.3E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.3E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 6.3E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 6.3E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 6.3E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 PRINTS PR00702 Acriflavin resistance protein family signature 327 350 6.3E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 6.3E-62 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 Gene3D G3DSA:1.20.1640.10 507 1013 0.0 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 Gene3D G3DSA:3.30.2090.10 177 267 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Clos_2611 37512e0480593316204b791f7cbacce0 1037 SUPERFAMILY SSF82693 560 659 5.75E-14 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 SUPERFAMILY SSF82866 288 484 3.01E-46 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 Gene3D G3DSA:1.20.1640.10 10 506 0.0 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1016 4.3E-269 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Clos_2611 37512e0480593316204b791f7cbacce0 1037 Gene3D G3DSA:3.30.70.1320 134 323 0.0 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 Gene3D G3DSA:3.30.70.1430 40 807 0.0 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 Gene3D G3DSA:3.30.70.1430 561 661 0.0 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 SUPERFAMILY SSF82714 712 796 1.96E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Clos_2611 37512e0480593316204b791f7cbacce0 1037 SUPERFAMILY SSF82693 40 134 8.63E-24 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 SUPERFAMILY SSF82866 796 1018 8.24E-54 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 SUPERFAMILY SSF82714 183 262 2.35E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Clos_2611 37512e0480593316204b791f7cbacce0 1037 Gene3D G3DSA:3.30.70.1440 662 856 0.0 T 11-10-2018 Clos_2611 37512e0480593316204b791f7cbacce0 1037 SUPERFAMILY SSF82693 136 321 1.19E-15 T 11-10-2018 Clos_0269 c40788bc693d81f4a78b7d3a5712f1c4 250 SUPERFAMILY SSF52540 4 236 1.09E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0269 c40788bc693d81f4a78b7d3a5712f1c4 250 Gene3D G3DSA:3.40.50.300 1 246 9.7E-64 T 11-10-2018 Clos_0269 c40788bc693d81f4a78b7d3a5712f1c4 250 SMART SM00382 28 229 2.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0269 c40788bc693d81f4a78b7d3a5712f1c4 250 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 250 3.6E-128 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Clos_0269 c40788bc693d81f4a78b7d3a5712f1c4 250 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0269 c40788bc693d81f4a78b7d3a5712f1c4 250 Pfam PF00005 ABC transporter 19 175 3.8E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1349 5c845f80b56df77341b13b0e2ea68930 303 Gene3D G3DSA:1.10.3720.10 92 298 3.4E-30 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1349 5c845f80b56df77341b13b0e2ea68930 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 4.2E-38 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_1349 5c845f80b56df77341b13b0e2ea68930 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 72 2.7E-16 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Clos_1349 5c845f80b56df77341b13b0e2ea68930 303 SUPERFAMILY SSF161098 96 289 2.49E-36 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 Gene3D G3DSA:2.30.30.790 5 114 4.5E-15 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 PRINTS PR00061 Ribosomal protein L19 signature 33 62 5.5E-38 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 PRINTS PR00061 Ribosomal protein L19 signature 3 32 5.5E-38 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 PRINTS PR00061 Ribosomal protein L19 signature 87 112 5.5E-38 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 SUPERFAMILY SSF50104 1 107 3.51E-45 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 PIRSF PIRSF002191 1 115 8.4E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 Pfam PF01245 Ribosomal protein L19 3 113 7.3E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 113 3.0E-49 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1468 84d0841a9472f5c6ecc1155f7a6d527c 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 114 32.032 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 Gene3D G3DSA:3.50.50.60 140 257 1.1E-68 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 5.4E-11 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 SUPERFAMILY SSF55424 323 431 2.92E-13 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 Gene3D G3DSA:3.50.50.60 3 312 1.1E-68 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 SUPERFAMILY SSF51905 2 313 3.02E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.1E-17 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 1.1E-17 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 125 143 1.1E-17 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 1.1E-17 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 6.7E-36 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 6.7E-36 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 6.7E-36 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 424 6.7E-36 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 6.7E-36 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 128 137 6.7E-36 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 322 343 6.7E-36 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 382 397 6.7E-36 T 11-10-2018 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 Gene3D G3DSA:3.30.390.30 326 436 3.0E-13 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Clos_2376 c8a11723f0b24aa83978bbe3e04fd77f 438 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 306 6.5E-42 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 Gene3D G3DSA:3.90.226.10 196 364 3.0E-96 T 11-10-2018 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 Pfam PF13180 PDZ domain 107 187 1.5E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 Pfam PF03572 Peptidase family S41 206 366 4.2E-58 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 Gene3D G3DSA:2.30.42.10 107 195 3.0E-96 T 11-10-2018 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 SMART SM00228 107 179 2.7E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 SMART SM00245 181 367 1.9E-71 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 SUPERFAMILY SSF50156 100 211 2.89E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 60 384 2.1E-109 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 Gene3D G3DSA:3.30.750.44 59 342 3.0E-96 T 11-10-2018 Clos_2259 272e5c80b6c155fd565ed45cbc37ad95 398 SUPERFAMILY SSF52096 56 373 1.99E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_0299 f39ce818538329b20d0fbb47190456be 409 Pfam PF01546 Peptidase family M20/M25/M40 142 405 5.3E-16 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Clos_0299 f39ce818538329b20d0fbb47190456be 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 407 2.8E-180 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 Clos_0299 f39ce818538329b20d0fbb47190456be 409 SUPERFAMILY SSF53187 1 407 6.29E-85 T 11-10-2018 Clos_0299 f39ce818538329b20d0fbb47190456be 409 Pfam PF07687 Peptidase dimerisation domain 209 309 6.9E-10 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Clos_0299 f39ce818538329b20d0fbb47190456be 409 Gene3D G3DSA:3.40.630.10 4 403 6.8E-185 T 11-10-2018 Clos_0299 f39ce818538329b20d0fbb47190456be 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Clos_0299 f39ce818538329b20d0fbb47190456be 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 141 180 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Clos_0299 f39ce818538329b20d0fbb47190456be 409 SUPERFAMILY SSF55031 212 322 3.35E-33 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Clos_0299 f39ce818538329b20d0fbb47190456be 409 Gene3D G3DSA:3.30.70.360 212 322 6.8E-185 T 11-10-2018 Clos_0299 f39ce818538329b20d0fbb47190456be 409 Hamap MF_00550 Peptidase T [pepT]. 1 407 59.86 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 Clos_0299 f39ce818538329b20d0fbb47190456be 409 PIRSF PIRSF037215 1 409 1.1E-188 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 Clos_2044 1b442afada8fce41cef19b5607608d82 139 Pfam PF00293 NUDIX domain 6 117 1.9E-19 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_2044 1b442afada8fce41cef19b5607608d82 139 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Clos_2044 1b442afada8fce41cef19b5607608d82 139 PRINTS PR00502 NUDIX hydrolase family signature 46 61 7.5E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Clos_2044 1b442afada8fce41cef19b5607608d82 139 PRINTS PR00502 NUDIX hydrolase family signature 32 46 7.5E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Clos_2044 1b442afada8fce41cef19b5607608d82 139 Gene3D G3DSA:3.90.79.10 3 132 4.5E-30 T 11-10-2018 Clos_2044 1b442afada8fce41cef19b5607608d82 139 SUPERFAMILY SSF55811 6 120 4.2E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_2370 cec5d23cbb89095c7714758b9000e3fe 679 SMART SM00304 321 373 1.1E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_2370 cec5d23cbb89095c7714758b9000e3fe 679 SMART SM00283 395 678 7.1E-24 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2370 cec5d23cbb89095c7714758b9000e3fe 679 Gene3D G3DSA:3.30.450.20 80 193 1.5E-32 T 11-10-2018 Clos_2370 cec5d23cbb89095c7714758b9000e3fe 679 Gene3D G3DSA:1.10.287.950 321 679 5.8E-53 T 11-10-2018 Clos_2370 cec5d23cbb89095c7714758b9000e3fe 679 SUPERFAMILY SSF103190 70 204 8.11E-13 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Clos_2370 cec5d23cbb89095c7714758b9000e3fe 679 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 463 629 7.1E-26 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2370 cec5d23cbb89095c7714758b9000e3fe 679 SUPERFAMILY SSF58104 341 677 3.05E-52 T 11-10-2018 Clos_2370 cec5d23cbb89095c7714758b9000e3fe 679 Pfam PF02743 Cache domain 53 279 3.3E-28 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_2370 cec5d23cbb89095c7714758b9000e3fe 679 Gene3D G3DSA:3.30.450.20 194 293 1.5E-32 T 11-10-2018 Clos_2087 78f11e796b109cd064236197b329d321 450 Pfam PF01523 Putative modulator of DNA gyrase 22 310 1.1E-55 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Clos_2087 78f11e796b109cd064236197b329d321 450 Gene3D G3DSA:3.30.2290.10 1 214 5.9E-68 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Clos_2087 78f11e796b109cd064236197b329d321 450 SUPERFAMILY SSF111283 3 450 5.62E-112 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Clos_1317 c9579cb6bc574c7b864092d5e9e99bec 656 PIRSF PIRSF015855 1 649 1.8E-156 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Clos_1317 c9579cb6bc574c7b864092d5e9e99bec 656 Pfam PF01555 DNA methylase 117 477 2.2E-36 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Clos_1317 c9579cb6bc574c7b864092d5e9e99bec 656 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Clos_1317 c9579cb6bc574c7b864092d5e9e99bec 656 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 181 200 9.5E-11 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Clos_1317 c9579cb6bc574c7b864092d5e9e99bec 656 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 117 129 9.5E-11 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Clos_1317 c9579cb6bc574c7b864092d5e9e99bec 656 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 439 453 9.5E-11 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Clos_1317 c9579cb6bc574c7b864092d5e9e99bec 656 SUPERFAMILY SSF53335 86 494 6.76E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1499 14fb35ee8e7e541fbafca1581ac82a08 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 205 224 7.7E-26 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Clos_1499 14fb35ee8e7e541fbafca1581ac82a08 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 7.7E-26 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Clos_1499 14fb35ee8e7e541fbafca1581ac82a08 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 183 205 7.7E-26 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Clos_1499 14fb35ee8e7e541fbafca1581ac82a08 262 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 82 101 7.7E-26 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Clos_1499 14fb35ee8e7e541fbafca1581ac82a08 262 Pfam PF01311 Bacterial export proteins, family 1 14 250 5.0E-68 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Clos_1499 14fb35ee8e7e541fbafca1581ac82a08 262 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 258 2.1E-59 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 SUPERFAMILY SSF69189 283 377 6.28E-16 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 109 126 1.3E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 136 149 1.3E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.3E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 272 3.5E-61 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 Gene3D G3DSA:3.40.710.10 22 294 1.5E-87 T 11-10-2018 Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 SUPERFAMILY SSF56601 7 291 7.27E-73 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 SMART SM00936 291 382 3.9E-10 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 Gene3D G3DSA:2.60.410.10 295 382 8.9E-14 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1740 5603a0ec096767605d67f2b849ab2b73 442 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 294 380 1.3E-10 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1465 03313d97b28da59c6f32473dcc683a69 76 Gene3D G3DSA:3.30.300.20 6 72 8.5E-6 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Clos_1465 03313d97b28da59c6f32473dcc683a69 76 Hamap MF_00088 UPF0109 protein . 1 75 23.172 T 11-10-2018 IPR020627 Uncharacterised protein family UPF0109 Clos_1465 03313d97b28da59c6f32473dcc683a69 76 SUPERFAMILY SSF54814 15 59 1.7E-7 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Clos_1465 03313d97b28da59c6f32473dcc683a69 76 Pfam PF13083 KH domain 4 74 5.1E-24 T 11-10-2018 Clos_0694 70f4699053a5fab9d5c621eaef9580a8 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 53 187 2.0E-20 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_0694 70f4699053a5fab9d5c621eaef9580a8 192 Gene3D G3DSA:1.10.1740.10 29 131 5.0E-14 T 11-10-2018 Clos_0694 70f4699053a5fab9d5c621eaef9580a8 192 SUPERFAMILY SSF88659 124 190 7.66E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_0694 70f4699053a5fab9d5c621eaef9580a8 192 SUPERFAMILY SSF88946 45 123 3.26E-11 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0694 70f4699053a5fab9d5c621eaef9580a8 192 Pfam PF04542 Sigma-70 region 2 53 110 2.7E-7 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0694 70f4699053a5fab9d5c621eaef9580a8 192 Gene3D G3DSA:1.10.10.10 132 191 9.7E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0694 70f4699053a5fab9d5c621eaef9580a8 192 Pfam PF08281 Sigma-70, region 4 140 184 4.7E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_0241 f5792bade80b23e1d80c8b37b067c05d 666 Gene3D G3DSA:3.30.450.20 40 172 8.8E-13 T 11-10-2018 Clos_0241 f5792bade80b23e1d80c8b37b067c05d 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 456 616 1.1E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0241 f5792bade80b23e1d80c8b37b067c05d 666 Pfam PF02743 Cache domain 50 268 9.0E-25 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_0241 f5792bade80b23e1d80c8b37b067c05d 666 SMART SM00304 306 361 0.0013 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0241 f5792bade80b23e1d80c8b37b067c05d 666 SMART SM00283 390 665 1.3E-58 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0241 f5792bade80b23e1d80c8b37b067c05d 666 SUPERFAMILY SSF58104 337 665 5.75E-65 T 11-10-2018 Clos_0241 f5792bade80b23e1d80c8b37b067c05d 666 Gene3D G3DSA:3.30.450.20 191 281 8.9E-6 T 11-10-2018 Clos_0241 f5792bade80b23e1d80c8b37b067c05d 666 Gene3D G3DSA:1.10.287.950 325 665 3.4E-57 T 11-10-2018 Clos_1346 43f12fa4ebb1768ea92c5221af9265a0 140 SUPERFAMILY SSF54637 2 139 4.69E-44 T 11-10-2018 IPR029069 HotDog domain superfamily Clos_1346 43f12fa4ebb1768ea92c5221af9265a0 140 Gene3D G3DSA:3.10.129.10 3 140 1.1E-46 T 11-10-2018 Clos_1346 43f12fa4ebb1768ea92c5221af9265a0 140 Pfam PF01575 MaoC like domain 16 118 1.0E-24 T 11-10-2018 IPR002539 MaoC-like dehydratase domain Clos_0376 f82d3c88599690eb814c7f00d06e59e6 158 SUPERFAMILY SSF47741 85 154 2.22E-32 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Clos_0376 f82d3c88599690eb814c7f00d06e59e6 158 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 57 3.4E-7 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Clos_0376 f82d3c88599690eb814c7f00d06e59e6 158 Gene3D G3DSA:1.10.150.120 76 158 2.6E-34 T 11-10-2018 Clos_0376 f82d3c88599690eb814c7f00d06e59e6 158 Gene3D G3DSA:3.10.20.30 1 75 1.8E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Clos_0376 f82d3c88599690eb814c7f00d06e59e6 158 Pfam PF01799 [2Fe-2S] binding domain 74 146 2.6E-31 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Clos_0376 f82d3c88599690eb814c7f00d06e59e6 158 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Clos_0376 f82d3c88599690eb814c7f00d06e59e6 158 SUPERFAMILY SSF54292 5 79 1.19E-23 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Clos_1435 38b719623e89250c8c1fdfa1b26f25aa 292 Gene3D G3DSA:1.10.40.50 226 292 3.6E-22 T 11-10-2018 Clos_1435 38b719623e89250c8c1fdfa1b26f25aa 292 Pfam PF03193 RsgA GTPase 62 225 2.3E-62 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Clos_1435 38b719623e89250c8c1fdfa1b26f25aa 292 Pfam PF16745 RsgA N-terminal domain 4 58 4.9E-21 T 11-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal Clos_1435 38b719623e89250c8c1fdfa1b26f25aa 292 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 290 38.845 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Clos_1435 38b719623e89250c8c1fdfa1b26f25aa 292 SUPERFAMILY SSF52540 66 289 2.01E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1435 38b719623e89250c8c1fdfa1b26f25aa 292 Gene3D G3DSA:2.40.50.140 1 61 3.5E-23 T 11-10-2018 Clos_1435 38b719623e89250c8c1fdfa1b26f25aa 292 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 284 1.3E-80 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Clos_1435 38b719623e89250c8c1fdfa1b26f25aa 292 Gene3D G3DSA:3.40.50.300 62 225 6.0E-50 T 11-10-2018 Clos_1435 38b719623e89250c8c1fdfa1b26f25aa 292 SUPERFAMILY SSF50249 1 65 2.03E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 Pfam PF13509 S1 domain 5 67 4.9E-12 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 Pfam PF13509 S1 domain 73 133 4.4E-7 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 Gene3D G3DSA:2.40.50.140 148 215 2.4E-17 T 11-10-2018 Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 SMART SM00316 145 208 1.2E-12 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 SMART SM00316 72 133 21.0 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 SUPERFAMILY SSF50249 142 210 1.48E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 Gene3D G3DSA:1.10.10.10 216 278 6.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 Gene3D G3DSA:2.40.50.140 78 145 6.5E-6 T 11-10-2018 Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 Pfam PF00575 S1 RNA binding domain 145 208 4.9E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_2114 f14e7a1c6716752d99db2726c8082c7e 290 PIRSF PIRSF012524 1 279 4.5E-74 T 11-10-2018 IPR014464 Conserved virulence factor B Clos_2837 d4276e1d81862f05047d573b99966826 72 Gene3D G3DSA:1.10.260.40 1 58 1.8E-6 T 11-10-2018 Clos_2837 d4276e1d81862f05047d573b99966826 72 SUPERFAMILY SSF47413 6 49 1.93E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_2837 d4276e1d81862f05047d573b99966826 72 Pfam PF01381 Helix-turn-helix 14 46 4.6E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_0027 7ebd1174861fa7b3bfd503611b67f8cb 388 SUPERFAMILY SSF142984 238 303 6.67E-6 T 11-10-2018 Clos_0027 7ebd1174861fa7b3bfd503611b67f8cb 388 TIGRFAM TIGR04481 PR_assoc_PrdC: proline reductase-associated electron transfer protein PrdC 4 388 2.3E-155 T 11-10-2018 IPR031001 Proline reductase-associated electron transfer protein PrdC Clos_0027 7ebd1174861fa7b3bfd503611b67f8cb 388 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 58 2.6E-11 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Clos_0027 7ebd1174861fa7b3bfd503611b67f8cb 388 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 82 225 2.3E-39 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0027 7ebd1174861fa7b3bfd503611b67f8cb 388 SUPERFAMILY SSF142019 44 243 2.48E-45 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0027 7ebd1174861fa7b3bfd503611b67f8cb 388 Gene3D G3DSA:3.40.50.11540 87 232 6.3E-12 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 Gene3D G3DSA:3.40.50.10090 394 493 3.1E-18 T 11-10-2018 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 221 3.6E-43 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 SUPERFAMILY SSF53790 3 259 1.26E-73 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 Gene3D G3DSA:3.30.950.10 125 252 2.2E-38 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 PIRSF PIRSF036426 1 260 1.6E-97 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 89 122 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 14 28 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 9 245 7.1E-89 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 Gene3D G3DSA:3.40.50.10090 253 375 9.4E-23 T 11-10-2018 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 Pfam PF02602 Uroporphyrinogen-III synthase HemD 272 486 5.7E-45 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 Gene3D G3DSA:3.40.1010.10 7 124 4.4E-42 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Clos_1328 5143ff2e2eefd2235d1be789121ef5e8 496 SUPERFAMILY SSF69618 258 494 1.44E-49 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Gene3D G3DSA:1.10.460.10 135 550 6.8E-156 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 609 1.2E-239 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 SUPERFAMILY SSF57783 569 611 5.61E-14 T 11-10-2018 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Pfam PF01131 DNA topoisomerase 128 547 7.8E-134 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 657 674 0.11 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 575 610 8.7E-13 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 652 5.5E-13 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Gene3D G3DSA:3.40.50.140 1 134 1.6E-53 T 11-10-2018 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 SUPERFAMILY SSF56712 3 588 1.57E-195 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Gene3D G3DSA:2.70.20.10 184 457 6.8E-156 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 641 54.104 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Pfam PF01751 Toprim domain 5 113 1.7E-30 T 11-10-2018 IPR006171 TOPRIM domain Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 1.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 294 303 1.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 374 390 1.6E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Gene3D G3DSA:1.10.290.10 251 389 6.8E-156 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 Gene3D G3DSA:3.30.65.10 560 615 3.0E-14 T 11-10-2018 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 280 303 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 SMART SM00493 3 103 4.5E-32 T 11-10-2018 IPR006171 TOPRIM domain Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 SMART SM00436 104 192 5.4E-52 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Clos_1474 d3ba198f48cb57bbcd9f01129587e0a4 692 SMART SM00437 243 510 1.9E-114 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 PRINTS PR00297 10kDa chaperonin signature 80 93 1.1E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 PRINTS PR00297 10kDa chaperonin signature 59 71 1.1E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 Hamap MF_00580 10 kDa chaperonin [groS]. 2 94 25.784 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 Gene3D G3DSA:2.30.33.40 1 94 7.5E-36 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 SMART SM00883 2 93 3.1E-51 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 SUPERFAMILY SSF50129 1 94 1.32E-32 T 11-10-2018 IPR011032 GroES-like superfamily Clos_2448 8fc2da5ebaab50b5533e4f59388ff26e 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 8.0E-34 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Clos_1814 1b489eae33444793ff4f81c664943478 385 SUPERFAMILY SSF53383 3 374 1.63E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1814 1b489eae33444793ff4f81c664943478 385 Gene3D G3DSA:1.10.260.50 14 280 2.0E-146 T 11-10-2018 Clos_1814 1b489eae33444793ff4f81c664943478 385 Gene3D G3DSA:3.90.1150.10 3 371 2.0E-146 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_1814 1b489eae33444793ff4f81c664943478 385 Pfam PF00266 Aminotransferase class-V 3 367 1.1E-81 T 11-10-2018 IPR000192 Aminotransferase class V domain Clos_1814 1b489eae33444793ff4f81c664943478 385 Gene3D G3DSA:3.40.640.10 60 236 2.0E-146 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1814 1b489eae33444793ff4f81c664943478 385 PIRSF PIRSF005572 1 382 1.5E-131 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Clos_0632 e2676fe7246b78c0c2408a107a8ce526 117 Pfam PF03960 ArsC family 47 115 2.8E-14 T 11-10-2018 IPR006660 Arsenate reductase-like Clos_0632 e2676fe7246b78c0c2408a107a8ce526 117 Gene3D G3DSA:3.40.30.10 1 117 2.7E-48 T 11-10-2018 Clos_0632 e2676fe7246b78c0c2408a107a8ce526 117 SUPERFAMILY SSF52833 5 116 1.0E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0632 e2676fe7246b78c0c2408a107a8ce526 117 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 116 3.0E-30 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR Clos_1750 c3135095243d2f2051736af246ed1122 430 Gene3D G3DSA:3.40.50.300 158 344 5.5E-60 T 11-10-2018 Clos_1750 c3135095243d2f2051736af246ed1122 430 PIRSF PIRSF002401 1 378 2.3E-143 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type Clos_1750 c3135095243d2f2051736af246ed1122 430 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 361 428 4.9E-21 T 11-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Clos_1750 c3135095243d2f2051736af246ed1122 430 SUPERFAMILY SSF102741 359 429 2.75E-18 T 11-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Clos_1750 c3135095243d2f2051736af246ed1122 430 Pfam PF01926 50S ribosome-binding GTPase 160 283 4.0E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1750 c3135095243d2f2051736af246ed1122 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 5.5E-37 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1750 c3135095243d2f2051736af246ed1122 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 5.5E-37 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1750 c3135095243d2f2051736af246ed1122 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 5.5E-37 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1750 c3135095243d2f2051736af246ed1122 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 5.5E-37 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1750 c3135095243d2f2051736af246ed1122 430 Hamap MF_01454 GTPase Obg [obg]. 1 330 48.661 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Clos_1750 c3135095243d2f2051736af246ed1122 430 Pfam PF09269 Domain of unknown function (DUF1967) 361 428 1.1E-23 T 11-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Clos_1750 c3135095243d2f2051736af246ed1122 430 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Clos_1750 c3135095243d2f2051736af246ed1122 430 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 326 2.7E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_1750 c3135095243d2f2051736af246ed1122 430 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 329 6.2E-141 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Clos_1750 c3135095243d2f2051736af246ed1122 430 Gene3D G3DSA:2.40.240.60 361 430 6.8E-20 T 11-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Clos_1750 c3135095243d2f2051736af246ed1122 430 SUPERFAMILY SSF52540 160 353 3.65E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1750 c3135095243d2f2051736af246ed1122 430 Gene3D G3DSA:2.70.210.12 1 157 7.4E-58 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily Clos_1750 c3135095243d2f2051736af246ed1122 430 Pfam PF01018 GTP1/OBG 3 157 1.0E-59 T 11-10-2018 IPR006169 GTP1/OBG domain Clos_1750 c3135095243d2f2051736af246ed1122 430 SUPERFAMILY SSF82051 1 157 5.49E-55 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily Clos_2469 ef644691af8b8d374e2661f48b567749 233 SUPERFAMILY SSF53067 107 214 1.29E-13 T 11-10-2018 Clos_2469 ef644691af8b8d374e2661f48b567749 233 Gene3D G3DSA:3.30.420.40 95 189 1.4E-59 T 11-10-2018 Clos_2469 ef644691af8b8d374e2661f48b567749 233 Pfam PF00814 Glycoprotease family 33 181 2.1E-30 T 11-10-2018 IPR000905 Gcp-like domain Clos_2469 ef644691af8b8d374e2661f48b567749 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 217 1.1E-55 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Clos_2469 ef644691af8b8d374e2661f48b567749 233 SUPERFAMILY SSF53067 1 103 3.8E-29 T 11-10-2018 Clos_2469 ef644691af8b8d374e2661f48b567749 233 Gene3D G3DSA:3.30.420.40 3 219 1.4E-59 T 11-10-2018 Clos_1197 0aaa663bc5a36db8f238ca8dba30d163 298 Pfam PF03466 LysR substrate binding domain 90 291 3.1E-40 T 11-10-2018 IPR005119 LysR, substrate-binding Clos_1197 0aaa663bc5a36db8f238ca8dba30d163 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1197 0aaa663bc5a36db8f238ca8dba30d163 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1197 0aaa663bc5a36db8f238ca8dba30d163 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1197 0aaa663bc5a36db8f238ca8dba30d163 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1197 0aaa663bc5a36db8f238ca8dba30d163 298 Gene3D G3DSA:1.10.10.10 1 88 1.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1197 0aaa663bc5a36db8f238ca8dba30d163 298 SUPERFAMILY SSF53850 90 297 9.59E-38 T 11-10-2018 Clos_1197 0aaa663bc5a36db8f238ca8dba30d163 298 SUPERFAMILY SSF46785 1 86 9.67E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1197 0aaa663bc5a36db8f238ca8dba30d163 298 Gene3D G3DSA:3.40.190.290 91 297 3.1E-40 T 11-10-2018 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 Gene3D G3DSA:1.10.10.60 142 193 9.9E-15 T 11-10-2018 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 246 2.0E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 230 2.0E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 Pfam PF00072 Response regulator receiver domain 4 115 8.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 SUPERFAMILY SSF52172 1 134 4.84E-35 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 Gene3D G3DSA:3.40.50.2300 2 141 1.0E-34 T 11-10-2018 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 Gene3D G3DSA:1.10.10.60 194 251 1.1E-18 T 11-10-2018 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 Pfam PF12833 Helix-turn-helix domain 167 247 3.0E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 SUPERFAMILY SSF46689 197 249 7.17E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 SMART SM00342 161 246 1.1E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0180 79dfd95c9efa7d24e3d1d3831c86752d 253 SMART SM00448 2 116 2.0E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 Gene3D G3DSA:3.40.1160.10 2 263 7.7E-81 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 Pfam PF00696 Amino acid kinase family 10 240 6.3E-47 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 263 34.059 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 261 2.2E-88 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 PRINTS PR00474 Glutamate 5-kinase family signature 153 180 5.1E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 5.1E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 PRINTS PR00474 Glutamate 5-kinase family signature 214 234 5.1E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 PRINTS PR00474 Glutamate 5-kinase family signature 81 109 5.1E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 PRINTS PR00474 Glutamate 5-kinase family signature 121 142 5.1E-47 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 ProSitePatterns PS00902 Glutamate 5-kinase signature. 212 229 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 SUPERFAMILY SSF53633 10 261 7.33E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Clos_0128 da8b4dae076a88325c7d6b4f337dbfa9 263 PIRSF PIRSF000729 5 263 1.5E-91 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Clos_0462 e247f6f7b4bbb96cde38bfe3bcc58d28 284 Pfam PF08369 Proto-chlorophyllide reductase 57 kD subunit 3 47 3.6E-13 T 11-10-2018 IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal GO:0015979|GO:0015995|GO:0016491|GO:0055114 KEGG: 00860+1.3.7.7|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Clos_0462 e247f6f7b4bbb96cde38bfe3bcc58d28 284 Gene3D G3DSA:1.10.8.550 1 49 1.0E-12 T 11-10-2018 Clos_0462 e247f6f7b4bbb96cde38bfe3bcc58d28 284 Pfam PF12838 4Fe-4S dicluster domain 156 199 1.6E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0462 e247f6f7b4bbb96cde38bfe3bcc58d28 284 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 115 275 5.1E-18 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Clos_0462 e247f6f7b4bbb96cde38bfe3bcc58d28 284 Gene3D G3DSA:3.30.70.20 151 202 2.2E-12 T 11-10-2018 Clos_0462 e247f6f7b4bbb96cde38bfe3bcc58d28 284 SUPERFAMILY SSF56014 82 274 1.4E-26 T 11-10-2018 Clos_0462 e247f6f7b4bbb96cde38bfe3bcc58d28 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 185 196 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0462 e247f6f7b4bbb96cde38bfe3bcc58d28 284 SUPERFAMILY SSF54862 128 201 6.02E-18 T 11-10-2018 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Gene3D G3DSA:3.40.50.300 564 803 8.2E-247 T 11-10-2018 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Gene3D G3DSA:3.40.50.300 501 1011 8.2E-247 T 11-10-2018 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SUPERFAMILY SSF143517 1010 1164 9.42E-35 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SMART SM01058 501 598 5.8E-48 T 11-10-2018 IPR003711 CarD-like/TRCF domain Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Gene3D G3DSA:3.90.1150.50 1021 1173 3.8E-34 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SUPERFAMILY SSF52540 16 371 6.05E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SMART SM00982 1025 1125 1.0E-33 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SUPERFAMILY SSF52540 380 489 1.88E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Gene3D G3DSA:3.40.50.11180 41 358 2.6E-66 T 11-10-2018 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Pfam PF03461 TRCF domain 1026 1118 8.2E-27 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Gene3D G3DSA:3.30.2060.10 141 226 2.6E-66 T 11-10-2018 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Gene3D G3DSA:2.30.30.840 505 563 8.2E-247 T 11-10-2018 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 40 1159 28.176 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Pfam PF02559 CarD-like/TRCF domain 502 597 3.0E-32 T 11-10-2018 IPR003711 CarD-like/TRCF domain Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SMART SM00487 622 812 4.4E-36 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SUPERFAMILY SSF52540 804 1011 8.57E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Pfam PF00270 DEAD/DEAH box helicase 627 786 3.4E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 158 1098 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 Pfam PF00271 Helicase conserved C-terminal domain 829 931 1.6E-16 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SUPERFAMILY SSF52540 545 805 1.37E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SUPERFAMILY SSF141259 494 570 3.53E-24 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily Clos_2642 0f765ae1b66626e41b02eb51b96193d6 1174 SMART SM00490 848 932 1.3E-18 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_0183 e56006485f0a254a400acd59ef28ae1d 281 Gene3D G3DSA:3.40.190.10 145 237 3.5E-73 T 11-10-2018 Clos_0183 e56006485f0a254a400acd59ef28ae1d 281 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 80 93 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site Clos_0183 e56006485f0a254a400acd59ef28ae1d 281 SMART SM00062 54 275 2.0E-59 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_0183 e56006485f0a254a400acd59ef28ae1d 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 272 2.5E-58 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_0183 e56006485f0a254a400acd59ef28ae1d 281 SUPERFAMILY SSF53850 1 272 1.18E-62 T 11-10-2018 Clos_0183 e56006485f0a254a400acd59ef28ae1d 281 Gene3D G3DSA:3.40.190.10 52 270 3.5E-73 T 11-10-2018 Clos_2094 d063831663966a41f3e3b7bff5e03d8c 274 Gene3D G3DSA:1.10.3720.10 76 271 1.3E-20 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2094 d063831663966a41f3e3b7bff5e03d8c 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 265 4.5E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2094 d063831663966a41f3e3b7bff5e03d8c 274 SUPERFAMILY SSF161098 76 257 6.41E-28 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 SUPERFAMILY SSF54862 667 834 2.2E-24 T 11-10-2018 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 SMART SM00890 622 681 5.3E-31 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 609 9.6E-32 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Gene3D G3DSA:3.40.920.10 415 624 6.4E-91 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Pfam PF13484 4Fe-4S double cluster binding domain 690 759 4.4E-10 T 11-10-2018 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Gene3D G3DSA:4.10.780.10 632 670 2.4E-8 T 11-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 PIRSF PIRSF000159 1 1172 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 SUPERFAMILY SSF52518 790 1170 3.93E-138 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Gene3D G3DSA:3.40.50.970 789 1172 2.2E-177 T 11-10-2018 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 248 1.5E-77 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1170 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 SUPERFAMILY SSF52518 4 258 8.53E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 SUPERFAMILY SSF52922 260 413 5.71E-50 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Pfam PF10371 Domain of unknown function 625 680 8.7E-25 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 959 1069 4.9E-11 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Gene3D G3DSA:3.30.70.20 671 787 1.2E-48 T 11-10-2018 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Gene3D G3DSA:3.40.50.920 260 413 2.0E-62 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 747 758 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 374 1.7E-15 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 SUPERFAMILY SSF53323 416 670 3.66E-87 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_0237 0b7250a9a8c02008ff9e3198359cbbb9 1172 Gene3D G3DSA:3.40.50.970 2 258 5.8E-109 T 11-10-2018 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 309 5.0E-115 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 SUPERFAMILY SSF51905 3 309 5.8E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.2E-37 T 11-10-2018 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.2E-37 T 11-10-2018 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.2E-37 T 11-10-2018 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.2E-37 T 11-10-2018 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.2E-37 T 11-10-2018 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 Gene3D G3DSA:3.50.50.60 7 308 2.5E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0954 3c64134050a4e4a45123b5042bef6468 314 Gene3D G3DSA:3.50.50.60 121 249 2.5E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 5.0E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 5.0E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 5.0E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 5.0E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 5.0E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 5.0E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 5.0E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 5.0E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 5.0E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0954 3c64134050a4e4a45123b5042bef6468 314 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 298 5.3E-51 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_2068 f6ca331717c2c91f0dc552357719c88c 274 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 232 5.2E-69 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_2068 f6ca331717c2c91f0dc552357719c88c 274 SUPERFAMILY SSF53681 113 259 5.36E-25 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_2068 f6ca331717c2c91f0dc552357719c88c 274 Hamap MF_00258 Glutamate racemase [murI]. 8 261 33.526 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_2068 f6ca331717c2c91f0dc552357719c88c 274 Gene3D G3DSA:3.40.50.1860 9 235 9.8E-77 T 11-10-2018 Clos_2068 f6ca331717c2c91f0dc552357719c88c 274 Gene3D G3DSA:3.40.50.1860 99 210 9.8E-77 T 11-10-2018 Clos_2068 f6ca331717c2c91f0dc552357719c88c 274 SUPERFAMILY SSF53681 9 109 1.77E-34 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_2068 f6ca331717c2c91f0dc552357719c88c 274 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_2068 f6ca331717c2c91f0dc552357719c88c 274 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 216 8.4E-26 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_2569 a5cfafec3043a06aceb4820fd1ca673e 374 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 370 8.6E-155 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Clos_2569 a5cfafec3043a06aceb4820fd1ca673e 374 Gene3D G3DSA:3.40.50.2000 192 354 2.1E-147 T 11-10-2018 Clos_2569 a5cfafec3043a06aceb4820fd1ca673e 374 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 367 1.3E-120 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Clos_2569 a5cfafec3043a06aceb4820fd1ca673e 374 Gene3D G3DSA:3.40.50.2000 6 365 2.1E-147 T 11-10-2018 Clos_2569 a5cfafec3043a06aceb4820fd1ca673e 374 SUPERFAMILY SSF53756 3 371 4.02E-136 T 11-10-2018 Clos_0333 9cf65e8d974f202ea446cacfab2305db 310 Gene3D G3DSA:3.40.50.1100 7 304 2.4E-127 T 11-10-2018 Clos_0333 9cf65e8d974f202ea446cacfab2305db 310 SUPERFAMILY SSF53686 3 308 7.86E-107 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clos_0333 9cf65e8d974f202ea446cacfab2305db 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 308 2.1E-135 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Clos_0333 9cf65e8d974f202ea446cacfab2305db 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Clos_0333 9cf65e8d974f202ea446cacfab2305db 310 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 308 1.1E-140 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Clos_0333 9cf65e8d974f202ea446cacfab2305db 310 Gene3D G3DSA:3.40.50.1100 48 147 2.4E-127 T 11-10-2018 Clos_0333 9cf65e8d974f202ea446cacfab2305db 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 297 1.2E-74 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Clos_1266 16b4cf3a4ed0498a5e123c8372357875 195 Pfam PF14278 Transcriptional regulator C-terminal region 89 164 1.7E-16 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type Clos_1266 16b4cf3a4ed0498a5e123c8372357875 195 SUPERFAMILY SSF46689 8 74 2.14E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_1266 16b4cf3a4ed0498a5e123c8372357875 195 Gene3D G3DSA:1.10.357.10 5 193 1.1E-41 T 11-10-2018 Clos_1936 0fb383c4673755b093780e85ad373975 353 SUPERFAMILY SSF144083 288 351 3.92E-17 T 11-10-2018 Clos_1936 0fb383c4673755b093780e85ad373975 353 Pfam PF01544 CorA-like Mg2+ transporter protein 62 351 1.0E-53 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Clos_1936 0fb383c4673755b093780e85ad373975 353 Gene3D G3DSA:3.30.460.20 24 159 2.2E-31 T 11-10-2018 Clos_1936 0fb383c4673755b093780e85ad373975 353 Gene3D G3DSA:1.20.58.340 160 274 2.1E-24 T 11-10-2018 Clos_1936 0fb383c4673755b093780e85ad373975 353 Gene3D G3DSA:1.20.58.340 276 353 5.3E-23 T 11-10-2018 Clos_1936 0fb383c4673755b093780e85ad373975 353 SUPERFAMILY SSF143865 21 287 2.09E-56 T 11-10-2018 Clos_1936 0fb383c4673755b093780e85ad373975 353 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 37 352 4.0E-67 T 11-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 Clos_0362 6d23d4501ea290ee3f6818e05fbbd0d9 471 Pfam PF01979 Amidohydrolase family 54 440 1.8E-28 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Clos_0362 6d23d4501ea290ee3f6818e05fbbd0d9 471 SUPERFAMILY SSF51338 3 458 6.79E-29 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0362 6d23d4501ea290ee3f6818e05fbbd0d9 471 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 443 5.5E-90 T 11-10-2018 Clos_0362 6d23d4501ea290ee3f6818e05fbbd0d9 471 SUPERFAMILY SSF51556 56 386 4.99E-98 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_0362 6d23d4501ea290ee3f6818e05fbbd0d9 471 TIGRFAM TIGR03178 allantoinase: allantoinase 4 458 1.3E-107 T 11-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 Clos_0362 6d23d4501ea290ee3f6818e05fbbd0d9 471 Gene3D G3DSA:2.30.40.10 6 455 1.9E-150 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0362 6d23d4501ea290ee3f6818e05fbbd0d9 471 Gene3D G3DSA:3.20.20.140 56 382 1.9E-150 T 11-10-2018 Clos_0055 0892a941a2376e97a4d1fe4261223554 71 SUPERFAMILY SSF55008 1 67 1.83E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_0055 0892a941a2376e97a4d1fe4261223554 71 Pfam PF00403 Heavy-metal-associated domain 5 64 4.1E-17 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_0055 0892a941a2376e97a4d1fe4261223554 71 Gene3D G3DSA:3.30.70.100 1 70 1.1E-19 T 11-10-2018 Clos_0055 0892a941a2376e97a4d1fe4261223554 71 PRINTS PR00944 Copper ion binding protein signature 27 40 4.7E-9 T 11-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Clos_0055 0892a941a2376e97a4d1fe4261223554 71 PRINTS PR00944 Copper ion binding protein signature 14 27 4.7E-9 T 11-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Clos_0055 0892a941a2376e97a4d1fe4261223554 71 PRINTS PR00944 Copper ion binding protein signature 40 52 4.7E-9 T 11-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Clos_0055 0892a941a2376e97a4d1fe4261223554 71 PRINTS PR00944 Copper ion binding protein signature 52 65 4.7E-9 T 11-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Clos_0055 0892a941a2376e97a4d1fe4261223554 71 PRINTS PR00944 Copper ion binding protein signature 2 14 4.7E-9 T 11-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Clos_0055 0892a941a2376e97a4d1fe4261223554 71 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Clos_0199 9a891bc369ffe16e2d1c21cf488f3e20 486 SUPERFAMILY SSF51905 1 410 4.75E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0199 9a891bc369ffe16e2d1c21cf488f3e20 486 Gene3D G3DSA:3.30.9.10 86 322 6.2E-114 T 11-10-2018 Clos_0199 9a891bc369ffe16e2d1c21cf488f3e20 486 Pfam PF01266 FAD dependent oxidoreductase 3 360 4.4E-59 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Clos_0199 9a891bc369ffe16e2d1c21cf488f3e20 486 Gene3D G3DSA:3.50.50.60 3 355 6.2E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0199 9a891bc369ffe16e2d1c21cf488f3e20 486 Pfam PF04324 BFD-like [2Fe-2S] binding domain 406 459 3.9E-13 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Clos_0199 9a891bc369ffe16e2d1c21cf488f3e20 486 SUPERFAMILY SSF54373 218 314 1.88E-6 T 11-10-2018 Clos_0199 9a891bc369ffe16e2d1c21cf488f3e20 486 Gene3D G3DSA:1.10.10.1100 393 466 1.1E-17 T 11-10-2018 Clos_1972 eea8f095fdfb8089df7dbfa74153d1f9 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 8.8E-24 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Clos_1972 eea8f095fdfb8089df7dbfa74153d1f9 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 339 47.358 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Clos_1972 eea8f095fdfb8089df7dbfa74153d1f9 339 Gene3D G3DSA:3.30.930.10 8 339 1.9E-126 T 11-10-2018 Clos_1972 eea8f095fdfb8089df7dbfa74153d1f9 339 SUPERFAMILY SSF46589 15 99 3.82E-21 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Clos_1972 eea8f095fdfb8089df7dbfa74153d1f9 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 339 1.5E-107 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Clos_1972 eea8f095fdfb8089df7dbfa74153d1f9 339 Pfam PF01409 tRNA synthetases class II core domain (F) 93 339 1.8E-106 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Clos_1972 eea8f095fdfb8089df7dbfa74153d1f9 339 SUPERFAMILY SSF55681 93 339 3.83E-83 T 11-10-2018 Clos_1853 0ed38b6db14983658a5450d5d39194db 125 Gene3D G3DSA:1.10.260.40 7 116 2.3E-24 T 11-10-2018 Clos_1853 0ed38b6db14983658a5450d5d39194db 125 Pfam PF12844 Helix-turn-helix domain 9 67 3.2E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1853 0ed38b6db14983658a5450d5d39194db 125 SMART SM00530 10 65 2.9E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1853 0ed38b6db14983658a5450d5d39194db 125 SUPERFAMILY SSF47413 3 70 5.63E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 50 63 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 209 235 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 Pfam PF04545 Sigma-70, region 4 190 236 1.4E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 PRINTS PR00046 Major sigma-70 factor signature 192 204 8.6E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 PRINTS PR00046 Major sigma-70 factor signature 209 224 8.6E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 PRINTS PR00046 Major sigma-70 factor signature 50 63 8.6E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 PRINTS PR00046 Major sigma-70 factor signature 224 235 8.6E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 SUPERFAMILY SSF88659 172 241 8.6E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 23 240 8.0E-78 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 Gene3D G3DSA:1.10.1740.10 8 93 2.3E-30 T 11-10-2018 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 Pfam PF04542 Sigma-70 region 2 23 95 9.1E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 239 1.3E-35 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 PIRSF PIRSF000770 2 245 2.3E-48 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 Pfam PF04539 Sigma-70 region 3 104 155 2.7E-8 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 SUPERFAMILY SSF88659 96 158 1.83E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 SUPERFAMILY SSF88946 5 95 3.45E-27 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1510 e269a41b843e429d01acbdb14ff5e891 245 Gene3D G3DSA:1.20.140.160 94 242 6.0E-46 T 11-10-2018 Clos_1857 6844679974b9a971a5018440eefb8d53 1903 Pfam PF00270 DEAD/DEAH box helicase 98 217 2.2E-10 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Clos_1857 6844679974b9a971a5018440eefb8d53 1903 SUPERFAMILY SSF52540 111 1312 2.66E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1857 6844679974b9a971a5018440eefb8d53 1903 SMART SM00490 1165 1269 3.0E-4 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1857 6844679974b9a971a5018440eefb8d53 1903 Gene3D G3DSA:3.40.50.300 1160 1294 1.6E-11 T 11-10-2018 Clos_1857 6844679974b9a971a5018440eefb8d53 1903 SUPERFAMILY SSF52540 92 421 6.27E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1857 6844679974b9a971a5018440eefb8d53 1903 Pfam PF00271 Helicase conserved C-terminal domain 1221 1269 5.7E-7 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1857 6844679974b9a971a5018440eefb8d53 1903 SMART SM00487 92 445 6.9E-23 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clos_2574 1fc578d6458fa38095f0567dc87ce9fc 174 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 13 169 9.3E-38 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Clos_2574 1fc578d6458fa38095f0567dc87ce9fc 174 Gene3D G3DSA:3.40.50.2300 11 174 1.3E-52 T 11-10-2018 Clos_2574 1fc578d6458fa38095f0567dc87ce9fc 174 SMART SM00226 11 172 2.6E-45 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Clos_2574 1fc578d6458fa38095f0567dc87ce9fc 174 SUPERFAMILY SSF52788 9 173 1.83E-41 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Clos_2574 1fc578d6458fa38095f0567dc87ce9fc 174 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 13 30 1.3E-7 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Clos_2574 1fc578d6458fa38095f0567dc87ce9fc 174 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 90 105 1.3E-7 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Clos_2574 1fc578d6458fa38095f0567dc87ce9fc 174 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 56 72 1.3E-7 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Clos_1005 a05b30f7a744bd576b24dd03c576e8f1 188 SUPERFAMILY SSF53335 8 155 4.71E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1005 a05b30f7a744bd576b24dd03c576e8f1 188 Pfam PF03848 Tellurite resistance protein TehB 21 95 9.8E-10 T 11-10-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain Clos_1005 a05b30f7a744bd576b24dd03c576e8f1 188 Gene3D G3DSA:3.40.50.150 3 184 1.3E-21 T 11-10-2018 Clos_2430 7e378b91afb7f7283705b42bab4b4d24 332 SUPERFAMILY SSF81345 7 326 1.29E-75 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2430 7e378b91afb7f7283705b42bab4b4d24 332 Gene3D G3DSA:1.10.3470.10 4 330 4.2E-90 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2430 7e378b91afb7f7283705b42bab4b4d24 332 Pfam PF01032 FecCD transport family 19 326 4.9E-88 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_0766 13e383c3155ac0538afee03b6942eece 437 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 5 422 1.1E-179 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Clos_0766 13e383c3155ac0538afee03b6942eece 437 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 4 427 88.556 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Clos_0766 13e383c3155ac0538afee03b6942eece 437 Pfam PF01964 Radical SAM ThiC family 5 422 1.9E-197 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Clos_0766 13e383c3155ac0538afee03b6942eece 437 Gene3D G3DSA:3.20.20.540 46 363 6.7E-139 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Clos_1678 dcb363438597b77407a4f893394588c8 398 Pfam PF11798 IMS family HHH motif 170 199 2.2E-8 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Clos_1678 dcb363438597b77407a4f893394588c8 398 Pfam PF00817 impB/mucB/samB family 8 156 1.0E-45 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Clos_1678 dcb363438597b77407a4f893394588c8 398 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 347 4.2E-17 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Clos_1678 dcb363438597b77407a4f893394588c8 398 SUPERFAMILY SSF56672 4 237 3.38E-72 T 11-10-2018 Clos_1678 dcb363438597b77407a4f893394588c8 398 Gene3D G3DSA:1.10.150.20 178 231 1.2E-14 T 11-10-2018 Clos_1678 dcb363438597b77407a4f893394588c8 398 Hamap MF_01113 DNA polymerase IV [dinB]. 2 354 34.016 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Clos_1678 dcb363438597b77407a4f893394588c8 398 Gene3D G3DSA:3.30.1490.100 244 348 1.0E-21 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Clos_1678 dcb363438597b77407a4f893394588c8 398 Gene3D G3DSA:2.30.40.20 22 75 1.0E-51 T 11-10-2018 Clos_1678 dcb363438597b77407a4f893394588c8 398 Gene3D G3DSA:3.30.70.270 5 164 1.0E-51 T 11-10-2018 Clos_1678 dcb363438597b77407a4f893394588c8 398 SUPERFAMILY SSF100879 243 342 3.61E-24 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Clos_0993 9fc72691c4f0dd41b02d110e38e7fd52 411 Gene3D G3DSA:3.40.50.300 2 181 8.7E-36 T 11-10-2018 Clos_0993 9fc72691c4f0dd41b02d110e38e7fd52 411 Gene3D G3DSA:3.40.50.11410 292 402 2.6E-38 T 11-10-2018 Clos_0993 9fc72691c4f0dd41b02d110e38e7fd52 411 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 164 3.0E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_0993 9fc72691c4f0dd41b02d110e38e7fd52 411 TIGRFAM TIGR03918 GTP_HydF: [FeFe] hydrogenase H-cluster maturation GTPase HydF 3 399 8.6E-166 T 11-10-2018 IPR023873 [FeFe]-hydrogenase H-cluster maturation GTPase HydF Clos_0993 9fc72691c4f0dd41b02d110e38e7fd52 411 Pfam PF01926 50S ribosome-binding GTPase 12 126 1.8E-17 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_0993 9fc72691c4f0dd41b02d110e38e7fd52 411 SUPERFAMILY SSF52540 12 182 1.52E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0993 9fc72691c4f0dd41b02d110e38e7fd52 411 Gene3D G3DSA:3.40.50.11420 184 291 3.0E-41 T 11-10-2018 Clos_2258 223985a517861766c56f30c046c108b4 659 Pfam PF12344 Ultra-violet resistance protein B 550 592 3.3E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Clos_2258 223985a517861766c56f30c046c108b4 659 SUPERFAMILY SSF52540 32 569 1.13E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2258 223985a517861766c56f30c046c108b4 659 SMART SM00487 8 424 1.0E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clos_2258 223985a517861766c56f30c046c108b4 659 Pfam PF02151 UvrB/uvrC motif 622 657 1.5E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 Clos_2258 223985a517861766c56f30c046c108b4 659 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 657 44.408 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Clos_2258 223985a517861766c56f30c046c108b4 659 Pfam PF04851 Type III restriction enzyme, res subunit 14 137 1.0E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Clos_2258 223985a517861766c56f30c046c108b4 659 SUPERFAMILY SSF46600 615 657 2.75E-11 T 11-10-2018 IPR036876 UVR domain superfamily Clos_2258 223985a517861766c56f30c046c108b4 659 Pfam PF00271 Helicase conserved C-terminal domain 433 542 3.3E-19 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_2258 223985a517861766c56f30c046c108b4 659 Gene3D G3DSA:3.40.50.300 1 239 4.2E-83 T 11-10-2018 Clos_2258 223985a517861766c56f30c046c108b4 659 Gene3D G3DSA:3.40.50.300 413 594 1.9E-51 T 11-10-2018 Clos_2258 223985a517861766c56f30c046c108b4 659 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 655 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Clos_2258 223985a517861766c56f30c046c108b4 659 Gene3D G3DSA:4.10.860.10 604 658 6.8E-9 T 11-10-2018 Clos_2258 223985a517861766c56f30c046c108b4 659 SMART SM00490 458 544 2.7E-21 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_2258 223985a517861766c56f30c046c108b4 659 Gene3D G3DSA:3.40.50.300 271 412 9.4E-54 T 11-10-2018 Clos_2258 223985a517861766c56f30c046c108b4 659 SUPERFAMILY SSF52540 2 413 4.68E-137 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2095 daed19eed283a4b086fdd339aa7e8c06 512 SUPERFAMILY SSF109604 301 492 2.76E-36 T 11-10-2018 Clos_2095 daed19eed283a4b086fdd339aa7e8c06 512 SMART SM00471 310 462 1.1E-5 T 11-10-2018 IPR003607 HD/PDEase domain Clos_2095 daed19eed283a4b086fdd339aa7e8c06 512 Pfam PF01966 HD domain 316 452 1.6E-19 T 11-10-2018 IPR006674 HD domain Clos_2095 daed19eed283a4b086fdd339aa7e8c06 512 Gene3D G3DSA:3.30.450.40 142 291 4.6E-16 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_2095 daed19eed283a4b086fdd339aa7e8c06 512 Gene3D G3DSA:1.10.3210.10 292 502 1.4E-76 T 11-10-2018 Clos_2095 daed19eed283a4b086fdd339aa7e8c06 512 SUPERFAMILY SSF55781 143 290 1.13E-13 T 11-10-2018 Clos_2095 daed19eed283a4b086fdd339aa7e8c06 512 Pfam PF13185 GAF domain 143 286 8.3E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 Clos_1117 0671ae92bd58f5114a56c4388c41d942 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 296 1.8E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_1117 0671ae92bd58f5114a56c4388c41d942 300 Gene3D G3DSA:1.10.3720.10 70 299 3.3E-34 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1117 0671ae92bd58f5114a56c4388c41d942 300 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 17 296 1.1E-82 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Clos_1117 0671ae92bd58f5114a56c4388c41d942 300 SUPERFAMILY SSF161098 21 292 1.18E-33 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2340 9201c0aee176f24e9dd571d09063f64b 461 SMART SM00487 22 219 6.3E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clos_2340 9201c0aee176f24e9dd571d09063f64b 461 SUPERFAMILY SSF52540 71 357 9.0E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2340 9201c0aee176f24e9dd571d09063f64b 461 Gene3D G3DSA:3.40.50.300 1 208 5.2E-76 T 11-10-2018 Clos_2340 9201c0aee176f24e9dd571d09063f64b 461 Pfam PF00270 DEAD/DEAH box helicase 27 190 1.5E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Clos_2340 9201c0aee176f24e9dd571d09063f64b 461 Gene3D G3DSA:3.40.50.300 211 439 2.3E-54 T 11-10-2018 Clos_2340 9201c0aee176f24e9dd571d09063f64b 461 SMART SM00490 255 336 8.3E-35 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_2340 9201c0aee176f24e9dd571d09063f64b 461 Pfam PF00271 Helicase conserved C-terminal domain 229 336 1.6E-31 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_2382 329100303850253c1bcaa091ed168a6c 449 SUPERFAMILY SSF55957 358 449 3.53E-24 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 Gene3D G3DSA:3.40.120.10 174 363 4.2E-72 T 11-10-2018 Clos_2382 329100303850253c1bcaa091ed168a6c 449 SUPERFAMILY SSF53738 258 365 8.63E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 Gene3D G3DSA:3.40.120.10 3 156 6.1E-54 T 11-10-2018 Clos_2382 329100303850253c1bcaa091ed168a6c 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 445 1.3E-176 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 SUPERFAMILY SSF53738 3 181 1.81E-48 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 Gene3D G3DSA:3.30.310.50 371 449 2.6E-24 T 11-10-2018 Clos_2382 329100303850253c1bcaa091ed168a6c 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 374 445 2.3E-16 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 254 5.0E-21 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 2.7E-45 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 4.1E-15 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 4.1E-15 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 4.1E-15 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 369 7.0E-34 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 447 44.945 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 SUPERFAMILY SSF53738 158 257 2.16E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Clos_2382 329100303850253c1bcaa091ed168a6c 449 Gene3D G3DSA:3.40.120.10 257 340 4.2E-72 T 11-10-2018 Clos_1010 3c7fcec2ae26068a94aa8172ede9c992 67 SUPERFAMILY SSF50331 1 67 6.8E-20 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Clos_1010 3c7fcec2ae26068a94aa8172ede9c992 67 Pfam PF03459 TOBE domain 4 65 6.4E-16 T 11-10-2018 IPR005116 Transport-associated OB, type 1 Clos_1010 3c7fcec2ae26068a94aa8172ede9c992 67 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 66 1.5E-20 T 11-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 Clos_1010 3c7fcec2ae26068a94aa8172ede9c992 67 Gene3D G3DSA:2.40.50.100 1 67 1.1E-22 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 Pfam PF00122 E1-E2 ATPase 252 431 6.3E-48 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 225 725 6.8E-76 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 SUPERFAMILY SSF55008 11 68 2.88E-11 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 Pfam PF00403 Heavy-metal-associated domain 13 71 3.4E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 201 748 2.9E-175 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 201 749 3.3E-159 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 300 314 5.2E-22 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 664 5.2E-22 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 669 681 5.2E-22 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 452 466 5.2E-22 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 589 599 5.2E-22 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 Gene3D G3DSA:3.40.50.1000 433 698 1.9E-82 T 11-10-2018 IPR023214 HAD superfamily Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 SUPERFAMILY SSF81665 200 446 2.22E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 Pfam PF00702 haloacid dehalogenase-like hydrolase 448 659 5.0E-34 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 SUPERFAMILY SSF81653 253 350 6.8E-24 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 Gene3D G3DSA:3.40.1110.10 463 573 1.9E-82 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 Gene3D G3DSA:2.70.150.20 237 354 1.4E-31 T 11-10-2018 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 SUPERFAMILY SSF56784 450 746 4.9E-61 T 11-10-2018 IPR036412 HAD-like superfamily Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 454 460 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 ProSitePatterns PS01047 Heavy-metal-associated domain. 15 44 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 PRINTS PR00941 Cadmium-transporting ATPase signature 13 22 2.0E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 PRINTS PR00941 Cadmium-transporting ATPase signature 235 255 2.0E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 PRINTS PR00941 Cadmium-transporting ATPase signature 316 332 2.0E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 PRINTS PR00941 Cadmium-transporting ATPase signature 335 349 2.0E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2162 12fb1d01e2455ae2122ed1fe0d347f43 754 Gene3D G3DSA:3.30.70.100 11 96 5.7E-12 T 11-10-2018 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.2E-36 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 416 3.8E-30 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 SMART SM01209 101 293 1.1E-122 T 11-10-2018 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 Gene3D G3DSA:3.30.1490.20 119 188 2.6E-24 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 416 6.3E-167 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 5.2E-77 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 SUPERFAMILY SSF56059 102 323 7.58E-61 T 11-10-2018 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 SUPERFAMILY SSF51246 327 416 2.41E-29 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 Gene3D G3DSA:3.30.470.20 189 326 1.1E-55 T 11-10-2018 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 SUPERFAMILY SSF52440 1 101 7.19E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Clos_0542 7f384fda384af47991a23fac345d6dd7 416 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 416 41.316 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 Gene3D G3DSA:3.90.600.10 327 416 2.3E-34 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 Gene3D G3DSA:3.40.50.20 2 93 1.3E-37 T 11-10-2018 Clos_0542 7f384fda384af47991a23fac345d6dd7 416 SMART SM01210 327 416 3.7E-41 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_0127 bcb3aa656f7a263374e5bf7e3dd15bcc 413 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 412 40.172 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Clos_0127 bcb3aa656f7a263374e5bf7e3dd15bcc 413 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 12 402 2.5E-153 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Clos_0127 bcb3aa656f7a263374e5bf7e3dd15bcc 413 Gene3D G3DSA:3.40.605.10 16 407 2.1E-161 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Clos_0127 bcb3aa656f7a263374e5bf7e3dd15bcc 413 Gene3D G3DSA:3.40.309.10 224 370 2.1E-161 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Clos_0127 bcb3aa656f7a263374e5bf7e3dd15bcc 413 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 319 341 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Clos_0127 bcb3aa656f7a263374e5bf7e3dd15bcc 413 Pfam PF00171 Aldehyde dehydrogenase family 20 280 1.5E-13 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Clos_0127 bcb3aa656f7a263374e5bf7e3dd15bcc 413 SUPERFAMILY SSF53720 6 412 1.23E-111 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Clos_0127 bcb3aa656f7a263374e5bf7e3dd15bcc 413 PIRSF PIRSF000151 1 413 7.1E-175 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Clos_1298 aa0b67f8c5bc0e2d6dc0c7b150f89e97 235 SUPERFAMILY SSF56037 50 228 1.05E-36 T 11-10-2018 Clos_1298 aa0b67f8c5bc0e2d6dc0c7b150f89e97 235 Gene3D G3DSA:3.50.40.10 73 207 8.2E-6 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Clos_1298 aa0b67f8c5bc0e2d6dc0c7b150f89e97 235 SMART SM00873 64 217 6.3E-21 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Clos_1298 aa0b67f8c5bc0e2d6dc0c7b150f89e97 235 Pfam PF03483 B3/4 domain 67 200 1.5E-25 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Clos_0492 97470a3a6de87a2790dac5ca3bf30865 210 Gene3D G3DSA:2.40.30.10 130 209 6.8E-18 T 11-10-2018 Clos_0492 97470a3a6de87a2790dac5ca3bf30865 210 Gene3D G3DSA:2.40.50.620 32 95 2.7E-21 T 11-10-2018 Clos_0492 97470a3a6de87a2790dac5ca3bf30865 210 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 202 1.1E-89 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0492 97470a3a6de87a2790dac5ca3bf30865 210 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 206 40.981 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0492 97470a3a6de87a2790dac5ca3bf30865 210 Pfam PF00297 Ribosomal protein L3 93 180 1.8E-13 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0492 97470a3a6de87a2790dac5ca3bf30865 210 SUPERFAMILY SSF50447 1 208 2.65E-81 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_0492 97470a3a6de87a2790dac5ca3bf30865 210 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site Clos_1613 c1e19c79ad534a510a206c1434fd3662 138 Gene3D G3DSA:1.10.940.10 1 134 2.0E-42 T 11-10-2018 IPR035926 NusB-like superfamily Clos_1613 c1e19c79ad534a510a206c1434fd3662 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 130 8.7E-39 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 Clos_1613 c1e19c79ad534a510a206c1434fd3662 138 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 133 20.76 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 Clos_1613 c1e19c79ad534a510a206c1434fd3662 138 Pfam PF01029 NusB family 6 129 9.3E-37 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Clos_1613 c1e19c79ad534a510a206c1434fd3662 138 SUPERFAMILY SSF48013 2 131 1.13E-35 T 11-10-2018 IPR035926 NusB-like superfamily Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 Gene3D G3DSA:3.30.420.40 416 559 7.8E-81 T 11-10-2018 Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 Gene3D G3DSA:3.30.420.40 7 255 5.8E-71 T 11-10-2018 Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 322 575 1.6E-37 T 11-10-2018 IPR008275 CoA enzyme activase Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 905 1223 3.7E-59 T 11-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 SUPERFAMILY SSF53067 6 255 1.23E-55 T 11-10-2018 Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 672 890 3.1E-83 T 11-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 322 576 8.1E-38 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 255 6.4E-19 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 Gene3D G3DSA:3.30.420.40 322 576 7.8E-81 T 11-10-2018 Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 Gene3D G3DSA:3.30.420.40 98 242 5.8E-71 T 11-10-2018 Clos_2198 25f805bce3e874467b58d5c0a65b06f2 1428 SUPERFAMILY SSF53067 321 576 2.48E-50 T 11-10-2018 Clos_0978 a862e98682210ecca3e9502dd98b9fec 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site Clos_0978 a862e98682210ecca3e9502dd98b9fec 155 SUPERFAMILY SSF74982 3 132 2.09E-53 T 11-10-2018 IPR023620 Small protein B Clos_0978 a862e98682210ecca3e9502dd98b9fec 155 Gene3D G3DSA:2.40.280.10 2 129 1.7E-52 T 11-10-2018 IPR023620 Small protein B Clos_0978 a862e98682210ecca3e9502dd98b9fec 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 73.41 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Clos_0978 a862e98682210ecca3e9502dd98b9fec 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 3.7E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Clos_0978 a862e98682210ecca3e9502dd98b9fec 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 132 2.0E-55 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Clos_0978 a862e98682210ecca3e9502dd98b9fec 155 Pfam PF01668 SmpB protein 9 150 1.4E-61 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Clos_1150 aaacfcfd9194e383fcef11f310c2bc9a 138 Pfam PF00293 NUDIX domain 16 112 2.1E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_1150 aaacfcfd9194e383fcef11f310c2bc9a 138 Gene3D G3DSA:3.90.79.10 1 138 1.5E-29 T 11-10-2018 Clos_1150 aaacfcfd9194e383fcef11f310c2bc9a 138 SUPERFAMILY SSF55811 18 126 3.79E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_1150 aaacfcfd9194e383fcef11f310c2bc9a 138 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 Gene3D G3DSA:3.30.160.20 196 291 1.7E-99 T 11-10-2018 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 SMART SM00937 52 165 3.1E-41 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 6 333 2.1E-152 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 Pfam PF00472 RF-1 domain 199 308 2.4E-43 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 Gene3D G3DSA:1.20.58.410 4 93 3.9E-15 T 11-10-2018 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 Gene3D G3DSA:3.30.70.1660 100 329 1.7E-99 T 11-10-2018 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 336 36.189 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 Pfam PF03462 PCRF domain 6 190 6.2E-58 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 SUPERFAMILY SSF75620 5 334 1.96E-133 T 11-10-2018 Clos_2484 5dcc90f82ce778fc2395b09628b9508f 340 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 215 231 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Clos_0991 62bc6beb262e3279913802638b1ea546 351 Gene3D G3DSA:3.20.20.70 2 349 3.8E-119 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0991 62bc6beb262e3279913802638b1ea546 351 SUPERFAMILY SSF102114 14 306 1.08E-57 T 11-10-2018 Clos_0991 62bc6beb262e3279913802638b1ea546 351 SMART SM00729 54 261 1.9E-25 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_0991 62bc6beb262e3279913802638b1ea546 351 Pfam PF04055 Radical SAM superfamily 58 217 4.0E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_0991 62bc6beb262e3279913802638b1ea546 351 TIGRFAM TIGR03956 rSAM_HydE: [FeFe] hydrogenase H-cluster radical SAM maturase HydE 6 344 1.7E-159 T 11-10-2018 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM Clos_0991 62bc6beb262e3279913802638b1ea546 351 PIRSF PIRSF004762 2 337 1.6E-74 T 11-10-2018 Clos_1397 9e371a01df9d5f7b31ce9a685425e628 151 Pfam PF11385 Protein of unknown function (DUF3189) 2 149 5.7E-51 T 11-10-2018 IPR021525 Protein of unknown function DUF3189 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 Gene3D G3DSA:3.30.70.100 70 137 1.1E-23 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00942 Copper-transporting ATPase 1 signature 3 28 4.3E-11 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00942 Copper-transporting ATPase 1 signature 96 117 4.3E-11 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00942 Copper-transporting ATPase 1 signature 214 239 4.3E-11 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 231 808 2.2E-204 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 Gene3D G3DSA:3.40.1110.10 511 631 6.8E-105 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 4 67 8.4E-14 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 74 137 2.2E-14 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 SUPERFAMILY SSF81665 247 798 4.84E-14 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 SUPERFAMILY SSF55008 72 138 9.69E-22 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 SUPERFAMILY SSF81653 302 399 6.93E-31 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 212 809 8.4E-189 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 502 508 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 349 363 4.6E-31 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 500 514 4.6E-31 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 624 635 4.6E-31 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 656 4.6E-31 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 722 734 4.6E-31 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 699 718 4.6E-31 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 Pfam PF00403 Heavy-metal-associated domain 6 66 4.7E-17 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 Pfam PF00403 Heavy-metal-associated domain 75 136 8.9E-19 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 271 778 1.0E-101 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 ProSitePatterns PS01047 Heavy-metal-associated domain. 78 107 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 Pfam PF00122 E1-E2 ATPase 300 479 6.3E-59 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 Gene3D G3DSA:2.70.150.20 292 404 4.4E-45 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 Gene3D G3DSA:3.40.50.1000 481 751 6.8E-105 T 11-10-2018 IPR023214 HAD superfamily Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 Gene3D G3DSA:3.30.70.100 1 68 8.4E-22 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 Pfam PF00702 haloacid dehalogenase-like hydrolase 496 713 8.8E-50 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00943 Copper-transporting ATPase signature 483 498 2.0E-23 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00943 Copper-transporting ATPase signature 117 137 2.0E-23 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00943 Copper-transporting ATPase signature 269 288 2.0E-23 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00943 Copper-transporting ATPase signature 216 235 2.0E-23 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00943 Copper-transporting ATPase signature 289 307 2.0E-23 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00943 Copper-transporting ATPase signature 733 747 2.0E-23 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00943 Copper-transporting ATPase signature 422 436 2.0E-23 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 PRINTS PR00943 Copper-transporting ATPase signature 676 693 2.0E-23 T 11-10-2018 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 SUPERFAMILY SSF55008 1 69 3.27E-21 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_1066 c6618d7d2648a7a37c56e382a79f5636 815 SUPERFAMILY SSF56784 498 806 3.13E-66 T 11-10-2018 IPR036412 HAD-like superfamily Clos_2807 320e429c229c52ec40f2d803dd0bf882 259 Pfam PF00226 DnaJ domain 200 252 2.8E-17 T 11-10-2018 IPR001623 DnaJ domain Clos_2807 320e429c229c52ec40f2d803dd0bf882 259 SMART SM00271 196 253 2.9E-17 T 11-10-2018 IPR001623 DnaJ domain Clos_2807 320e429c229c52ec40f2d803dd0bf882 259 SUPERFAMILY SSF46565 196 254 1.19E-17 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Clos_2807 320e429c229c52ec40f2d803dd0bf882 259 PRINTS PR00625 DnaJ domain signature 233 253 6.4E-12 T 11-10-2018 IPR001623 DnaJ domain Clos_2807 320e429c229c52ec40f2d803dd0bf882 259 PRINTS PR00625 DnaJ domain signature 217 232 6.4E-12 T 11-10-2018 IPR001623 DnaJ domain Clos_2807 320e429c229c52ec40f2d803dd0bf882 259 PRINTS PR00625 DnaJ domain signature 199 217 6.4E-12 T 11-10-2018 IPR001623 DnaJ domain Clos_2807 320e429c229c52ec40f2d803dd0bf882 259 Gene3D G3DSA:1.10.287.110 184 255 1.4E-17 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Clos_1956 d4fd33eda221ac2cec91129a262e35a2 146 SUPERFAMILY SSF55021 68 142 1.69E-9 T 11-10-2018 Clos_1956 d4fd33eda221ac2cec91129a262e35a2 146 Gene3D G3DSA:3.30.70.260 68 144 1.7E-5 T 11-10-2018 Clos_1956 d4fd33eda221ac2cec91129a262e35a2 146 PIRSF PIRSF025624 1 146 3.8E-51 T 11-10-2018 IPR008310 UPF0735 ACT domain-containing protein Clos_1956 d4fd33eda221ac2cec91129a262e35a2 146 Hamap MF_00707 UPF0735 ACT domain-containing protein . 2 146 31.999 T 11-10-2018 IPR008310 UPF0735 ACT domain-containing protein Clos_1956 d4fd33eda221ac2cec91129a262e35a2 146 Pfam PF13291 ACT domain 68 139 2.3E-6 T 11-10-2018 IPR002912 ACT domain Clos_2435 b3ab942414044a631903784ca9e07f31 554 Gene3D G3DSA:3.40.50.2030 230 378 4.7E-68 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Clos_2435 b3ab942414044a631903784ca9e07f31 554 PIRSF PIRSF000076 5 550 7.6E-274 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Clos_2435 b3ab942414044a631903784ca9e07f31 554 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 5 547 1.7E-235 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Clos_2435 b3ab942414044a631903784ca9e07f31 554 Gene3D G3DSA:1.20.1270.20 3 144 4.8E-43 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Clos_2435 b3ab942414044a631903784ca9e07f31 554 SUPERFAMILY SSF56821 4 547 9.31E-215 T 11-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Clos_2435 b3ab942414044a631903784ca9e07f31 554 Hamap MF_00069 Hydroxylamine reductase [hcp]. 5 549 23.91 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Clos_2435 b3ab942414044a631903784ca9e07f31 554 Gene3D G3DSA:3.40.50.2030 379 548 1.0E-63 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Clos_2435 b3ab942414044a631903784ca9e07f31 554 Pfam PF03063 Prismane/CO dehydrogenase family 5 544 2.5E-184 T 11-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Clos_2435 b3ab942414044a631903784ca9e07f31 554 Gene3D G3DSA:1.20.1270.20 145 228 1.0E-31 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 Gene3D G3DSA:3.10.290.10 327 408 7.1E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 SUPERFAMILY SSF55174 302 407 7.59E-17 T 11-10-2018 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 Pfam PF00579 tRNA synthetases class I (W and Y) 30 320 5.2E-79 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 Gene3D G3DSA:1.10.240.10 222 325 3.4E-36 T 11-10-2018 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 2.2E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 2.2E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 2.2E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.2E-26 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 Pfam PF01479 S4 domain 347 383 1.8E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 SUPERFAMILY SSF52374 3 320 5.06E-98 T 11-10-2018 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 Gene3D G3DSA:3.40.50.620 1 221 6.9E-83 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 408 42.054 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 Clos_0921 2b5c42b7fec12e854ecc747c0094e73f 409 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 1 407 7.0E-130 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Clos_2100 31d5056ebb3f8776fde4ad5690dac620 403 SUPERFAMILY SSF52172 1 155 1.61E-14 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2100 31d5056ebb3f8776fde4ad5690dac620 403 Gene3D G3DSA:3.40.50.2300 1 124 3.4E-14 T 11-10-2018 Clos_2100 31d5056ebb3f8776fde4ad5690dac620 403 SMART SM00331 173 399 3.9E-16 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2100 31d5056ebb3f8776fde4ad5690dac620 403 Gene3D G3DSA:3.60.40.10 141 398 1.5E-51 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2100 31d5056ebb3f8776fde4ad5690dac620 403 Pfam PF00072 Response regulator receiver domain 13 117 1.6E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2100 31d5056ebb3f8776fde4ad5690dac620 403 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 200 399 1.2E-29 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2401 b6bcdabe479c5481e17ecf0df19ff5eb 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 6 49 3.0E-15 T 11-10-2018 Clos_2401 b6bcdabe479c5481e17ecf0df19ff5eb 98 SUPERFAMILY SSF143414 7 93 3.53E-27 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_2401 b6bcdabe479c5481e17ecf0df19ff5eb 98 Gene3D G3DSA:3.30.70.1710 2 97 7.2E-35 T 11-10-2018 Clos_2401 b6bcdabe479c5481e17ecf0df19ff5eb 98 SMART SM00877 7 83 1.0E-33 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2401 b6bcdabe479c5481e17ecf0df19ff5eb 98 Pfam PF00936 BMC domain 8 83 3.3E-27 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 SUPERFAMILY SSF53774 2 327 2.09E-101 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 Gene3D G3DSA:3.40.50.1170 1 211 1.9E-65 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 Pfam PF00710 Asparaginase, N-terminal 5 194 1.7E-52 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 PIRSF PIRSF500176 2 328 2.0E-83 T 11-10-2018 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 SMART SM00870 5 321 3.8E-136 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 PIRSF PIRSF001220 1 329 1.4E-92 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 Gene3D G3DSA:3.40.50.40 212 325 8.1E-33 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 4.7E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 PRINTS PR00139 Asparaginase/glutaminase family signature 256 274 4.7E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Clos_1816 3930f5f3060690cbbdfc84d7dd98581c 330 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 4.7E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 450 558 2.6E-37 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 SUPERFAMILY SSF51905 107 425 1.68E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 296 4.8E-33 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 396 418 4.8E-33 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 130 4.8E-33 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 366 382 4.8E-33 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 257 4.8E-33 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 SUPERFAMILY SSF55424 447 562 9.62E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 143 153 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 110 431 1.3E-67 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 109 565 1.9E-160 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 Gene3D G3DSA:3.50.50.60 251 373 7.5E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 157 9.2E-67 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 242 251 9.2E-67 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 278 303 9.2E-67 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 446 467 9.2E-67 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 533 553 9.2E-67 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 418 9.2E-67 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 511 526 9.2E-67 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 110 132 9.2E-67 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 381 9.2E-67 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 Gene3D G3DSA:3.50.50.60 110 436 7.5E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 SUPERFAMILY SSF51230 2 88 1.14E-15 T 11-10-2018 IPR011053 Single hybrid motif Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 Pfam PF00364 Biotin-requiring enzyme 11 75 1.3E-10 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 Gene3D G3DSA:3.30.390.30 444 562 2.9E-45 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 Gene3D G3DSA:2.40.50.100 1 81 9.0E-15 T 11-10-2018 Clos_1037 b43b41810c2ad1bc01d8d2aa8affaab6 572 PIRSF PIRSF000350 38 564 1.4E-95 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Clos_2678 05319d5d6176d861df4c8f4bf58a472d 575 Pfam PF00005 ABC transporter 349 496 1.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2678 05319d5d6176d861df4c8f4bf58a472d 575 Gene3D G3DSA:3.40.50.300 329 574 4.7E-83 T 11-10-2018 Clos_2678 05319d5d6176d861df4c8f4bf58a472d 575 Gene3D G3DSA:1.20.1560.10 1 314 2.1E-92 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_2678 05319d5d6176d861df4c8f4bf58a472d 575 SUPERFAMILY SSF52540 323 568 3.87E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2678 05319d5d6176d861df4c8f4bf58a472d 575 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2678 05319d5d6176d861df4c8f4bf58a472d 575 Pfam PF00664 ABC transporter transmembrane region 20 285 6.0E-50 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_2678 05319d5d6176d861df4c8f4bf58a472d 575 SMART SM00382 358 544 1.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2678 05319d5d6176d861df4c8f4bf58a472d 575 SUPERFAMILY SSF90123 2 318 3.66E-79 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 SUPERFAMILY SSF50249 4 171 3.48E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 Gene3D G3DSA:3.40.50.300 205 438 1.4E-90 T 11-10-2018 Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 SMART SM00487 257 460 8.7E-36 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 650 1.3E-235 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 Pfam PF00270 DEAD/DEAH box helicase 262 421 1.5E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 SUPERFAMILY SSF52540 375 633 1.33E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 Gene3D G3DSA:2.40.50.140 44 141 3.7E-20 T 11-10-2018 Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 SMART SM00490 492 577 5.4E-24 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 SMART SM00490 327 395 0.21 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 SUPERFAMILY SSF52540 178 441 3.09E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 Pfam PF00271 Helicase conserved C-terminal domain 455 576 5.0E-20 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 Gene3D G3DSA:3.40.50.300 445 617 7.7E-61 T 11-10-2018 Clos_1441 dd2b97e0911c31601812f3d2803f5b15 678 Pfam PF17191 RecG wedge domain 7 172 1.3E-35 T 11-10-2018 IPR033454 RecG, wedge domain Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 SUPERFAMILY SSF52540 128 411 4.31E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 Gene3D G3DSA:3.40.50.300 450 665 6.8E-84 T 11-10-2018 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 Gene3D G3DSA:1.10.8.60 313 440 5.0E-37 T 11-10-2018 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 Gene3D G3DSA:3.40.50.300 115 310 1.0E-66 T 11-10-2018 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 171 297 6.7E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 496 660 3.9E-55 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 SMART SM01086 667 756 2.5E-34 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 530 548 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 SMART SM00382 166 311 6.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 SMART SM00382 496 644 1.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 SUPERFAMILY SSF52540 446 753 8.46E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 Gene3D G3DSA:1.10.8.60 667 758 1.5E-29 T 11-10-2018 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 Pfam PF02151 UvrB/uvrC motif 384 409 2.6E-4 T 11-10-2018 IPR001943 UVR domain GO:0005515 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 Gene3D G3DSA:4.10.860.10 376 428 5.0E-37 T 11-10-2018 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 667 747 3.9E-26 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 574 592 3.8E-39 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 545 563 3.8E-39 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 607 621 3.8E-39 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Clos_0137 b1c1f34c95bb4694cc2f8a5a815e0e00 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 500 518 3.8E-39 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 3.5E-20 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 3.5E-20 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 205 221 3.5E-20 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 285 303 3.5E-20 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 3.5E-20 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 249 270 3.5E-20 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.5E-20 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_1138 668c470663c47ac6938f946253d569e5 421 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 297 3.9E-34 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_1138 668c470663c47ac6938f946253d569e5 421 Gene3D G3DSA:3.50.50.60 121 255 3.9E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1138 668c470663c47ac6938f946253d569e5 421 Gene3D G3DSA:3.50.50.60 4 299 3.9E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 1.5E-23 T 11-10-2018 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.5E-23 T 11-10-2018 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 1.5E-23 T 11-10-2018 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 1.5E-23 T 11-10-2018 Clos_1138 668c470663c47ac6938f946253d569e5 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.5E-23 T 11-10-2018 Clos_1138 668c470663c47ac6938f946253d569e5 421 SUPERFAMILY SSF51905 3 323 7.3E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0563 d65e554be64976096adc5efa5f52baf3 215 SUPERFAMILY SSF102198 1 213 5.36E-59 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_0563 d65e554be64976096adc5efa5f52baf3 215 Pfam PF04199 Putative cyclase 5 155 3.2E-28 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_0563 d65e554be64976096adc5efa5f52baf3 215 Gene3D G3DSA:3.50.30.50 1 212 6.4E-56 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_0057 9092bbb8ebf8533be8d9c7cb12801655 339 Gene3D G3DSA:1.10.8.1150 31 103 2.9E-14 T 11-10-2018 Clos_0057 9092bbb8ebf8533be8d9c7cb12801655 339 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 4 335 32.13 T 11-10-2018 IPR003770 Endolytic murein transglycosylase Clos_0057 9092bbb8ebf8533be8d9c7cb12801655 339 Pfam PF02618 YceG-like family 37 331 5.1E-77 T 11-10-2018 IPR003770 Endolytic murein transglycosylase Clos_0057 9092bbb8ebf8533be8d9c7cb12801655 339 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 335 5.6E-71 T 11-10-2018 IPR003770 Endolytic murein transglycosylase Clos_0621 7822d86d44df4dd03114fea2ac42b180 364 Gene3D G3DSA:3.40.50.1970 2 181 5.9E-51 T 11-10-2018 Clos_0621 7822d86d44df4dd03114fea2ac42b180 364 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 170 198 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Clos_0621 7822d86d44df4dd03114fea2ac42b180 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 353 1.3E-89 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Clos_0621 7822d86d44df4dd03114fea2ac42b180 364 SUPERFAMILY SSF56796 3 362 1.57E-87 T 11-10-2018 Clos_0621 7822d86d44df4dd03114fea2ac42b180 364 Gene3D G3DSA:1.20.1090.10 183 364 9.1E-40 T 11-10-2018 Clos_2589 6579672b3ccd163d02ecb8a9e744312d 195 Gene3D G3DSA:3.30.60.20 146 195 6.1E-24 T 11-10-2018 Clos_2589 6579672b3ccd163d02ecb8a9e744312d 195 SUPERFAMILY SSF57716 146 193 6.18E-15 T 11-10-2018 Clos_2589 6579672b3ccd163d02ecb8a9e744312d 195 Hamap MF_00124 Thymidine kinase [tdk]. 10 194 35.828 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Clos_2589 6579672b3ccd163d02ecb8a9e744312d 195 PIRSF PIRSF035805 8 195 8.4E-67 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Clos_2589 6579672b3ccd163d02ecb8a9e744312d 195 Gene3D G3DSA:3.40.50.300 4 145 1.6E-55 T 11-10-2018 Clos_2589 6579672b3ccd163d02ecb8a9e744312d 195 SUPERFAMILY SSF52540 11 146 6.57E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2589 6579672b3ccd163d02ecb8a9e744312d 195 Pfam PF00265 Thymidine kinase 11 191 7.4E-59 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Clos_2589 6579672b3ccd163d02ecb8a9e744312d 195 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 178 191 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 Pfam PF03705 CheR methyltransferase, all-alpha domain 3 54 5.5E-17 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Clos_1560 f23dd90fc6a491466f8602f18577a609 257 SUPERFAMILY SSF53335 67 241 4.13E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1560 f23dd90fc6a491466f8602f18577a609 257 Gene3D G3DSA:1.10.155.10 2 65 3.6E-7 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Clos_1560 f23dd90fc6a491466f8602f18577a609 257 Gene3D G3DSA:3.40.50.150 66 256 2.7E-65 T 11-10-2018 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 SUPERFAMILY SSF47757 3 66 1.06E-13 T 11-10-2018 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 SMART SM00138 1 254 1.2E-83 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 PRINTS PR00996 Glutamate methyltransferase family signature 214 237 6.3E-36 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 PRINTS PR00996 Glutamate methyltransferase family signature 129 145 6.3E-36 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 PRINTS PR00996 Glutamate methyltransferase family signature 97 117 6.3E-36 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 PRINTS PR00996 Glutamate methyltransferase family signature 23 36 6.3E-36 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 6.3E-36 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 PRINTS PR00996 Glutamate methyltransferase family signature 195 209 6.3E-36 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Clos_1560 f23dd90fc6a491466f8602f18577a609 257 Pfam PF01739 CheR methyltransferase, SAM binding domain 67 246 5.8E-55 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Clos_0331 1f17d67c9d477c430badf4fe40461e1c 456 PIRSF PIRSF006603 3 456 2.1E-77 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0331 1f17d67c9d477c430badf4fe40461e1c 456 Pfam PF01554 MatE 26 185 5.0E-31 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0331 1f17d67c9d477c430badf4fe40461e1c 456 Pfam PF01554 MatE 252 413 1.0E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0331 1f17d67c9d477c430badf4fe40461e1c 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 422 3.9E-69 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_2393 33d363c28cc61fd7c142a39934cfa3a0 281 SUPERFAMILY SSF53067 144 273 1.36E-26 T 11-10-2018 Clos_2393 33d363c28cc61fd7c142a39934cfa3a0 281 Gene3D G3DSA:3.30.420.40 33 272 1.1E-102 T 11-10-2018 Clos_2393 33d363c28cc61fd7c142a39934cfa3a0 281 Pfam PF11104 Type IV pilus assembly protein PilM; 138 258 1.0E-13 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM Clos_2393 33d363c28cc61fd7c142a39934cfa3a0 281 SMART SM00842 34 140 0.0045 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Clos_2393 33d363c28cc61fd7c142a39934cfa3a0 281 SUPERFAMILY SSF53067 32 137 3.37E-11 T 11-10-2018 Clos_2393 33d363c28cc61fd7c142a39934cfa3a0 281 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 147 160 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Clos_2393 33d363c28cc61fd7c142a39934cfa3a0 281 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 36 273 4.3E-101 T 11-10-2018 IPR013366 Ethanolamine utilisation EutJ Clos_2393 33d363c28cc61fd7c142a39934cfa3a0 281 Gene3D G3DSA:3.30.420.40 146 259 1.1E-102 T 11-10-2018 Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 SUPERFAMILY SSF55781 210 353 4.8E-21 T 11-10-2018 Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 Gene3D G3DSA:3.30.70.270 355 516 1.4E-48 T 11-10-2018 Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 SUPERFAMILY SSF55781 7 164 3.49E-8 T 11-10-2018 Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 SUPERFAMILY SSF55073 365 515 2.35E-43 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 Gene3D G3DSA:3.30.450.40 199 353 8.2E-21 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 513 8.6E-43 T 11-10-2018 IPR000160 GGDEF domain Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 SMART SM00065 205 357 4.6E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 516 3.4E-48 T 11-10-2018 IPR000160 GGDEF domain Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 SMART SM00267 349 517 1.8E-42 T 11-10-2018 IPR000160 GGDEF domain Clos_2154 55deb7c0fc94b0d0ec6f18e07dcb203e 517 Pfam PF13185 GAF domain 210 347 2.4E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 SUPERFAMILY SSF47917 349 462 1.75E-53 T 11-10-2018 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 6 462 9.5E-261 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 4 464 58.731 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 Gene3D G3DSA:1.10.1140.10 349 463 2.9E-58 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 Gene3D G3DSA:3.40.50.300 79 348 1.2E-116 T 11-10-2018 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 1.5E-65 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 PIRSF PIRSF039072 1 463 5.7E-266 T 11-10-2018 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 SMART SM00382 145 331 1.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 SUPERFAMILY SSF52540 80 352 1.87E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 76 1.1E-22 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 SUPERFAMILY SSF50615 4 78 1.83E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2560 d6a745ff082a710b49f43570deef9dbd 464 Gene3D G3DSA:2.40.10.170 1 78 1.9E-30 T 11-10-2018 Clos_1361 94a72968c83dc676dcaf178a201063bf 222 PIRSF PIRSF001357 1 221 2.2E-76 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Clos_1361 94a72968c83dc676dcaf178a201063bf 222 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 35.796 T 11-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Clos_1361 94a72968c83dc676dcaf178a201063bf 222 Gene3D G3DSA:3.20.20.70 1 221 4.5E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1361 94a72968c83dc676dcaf178a201063bf 222 SMART SM01133 2 214 5.9E-98 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Clos_1361 94a72968c83dc676dcaf178a201063bf 222 Pfam PF01791 DeoC/LacD family aldolase 4 206 1.5E-17 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Clos_1361 94a72968c83dc676dcaf178a201063bf 222 SUPERFAMILY SSF51569 1 214 4.29E-81 T 11-10-2018 Clos_1361 94a72968c83dc676dcaf178a201063bf 222 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 212 3.3E-85 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Clos_0960 c56f2178f4925687ab2bd079ed5fb1ed 394 PIRSF PIRSF036593 3 388 9.5E-192 T 11-10-2018 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit Clos_0960 c56f2178f4925687ab2bd079ed5fb1ed 394 SUPERFAMILY SSF53659 29 287 2.99E-25 T 11-10-2018 Clos_0960 c56f2178f4925687ab2bd079ed5fb1ed 394 Pfam PF02504 Fatty acid synthesis protein 29 367 1.6E-71 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Clos_0960 c56f2178f4925687ab2bd079ed5fb1ed 394 Gene3D G3DSA:3.40.718.10 112 235 7.0E-12 T 11-10-2018 Clos_2624 bcd7dda9b1dd6ce80ceb478e840dde92 769 Pfam PF13753 Putative flagellar system-associated repeat 658 737 2.2E-8 T 11-10-2018 IPR028059 Putative flagellar system-associated repeat Clos_2661 89f97a140a2d1ddd912f6be1cdfda37b 255 SUPERFAMILY SSF51556 2 254 4.09E-97 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_2661 89f97a140a2d1ddd912f6be1cdfda37b 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Clos_2661 89f97a140a2d1ddd912f6be1cdfda37b 255 Gene3D G3DSA:3.20.20.140 1 255 1.4E-108 T 11-10-2018 Clos_2661 89f97a140a2d1ddd912f6be1cdfda37b 255 Pfam PF01026 TatD related DNase 3 253 1.8E-87 T 11-10-2018 IPR001130 TatD family GO:0016788 Clos_2661 89f97a140a2d1ddd912f6be1cdfda37b 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 3.6E-95 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Clos_2661 89f97a140a2d1ddd912f6be1cdfda37b 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Clos_2661 89f97a140a2d1ddd912f6be1cdfda37b 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Clos_2661 89f97a140a2d1ddd912f6be1cdfda37b 255 PIRSF PIRSF005902 1 255 3.3E-91 T 11-10-2018 IPR001130 TatD family GO:0016788 Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 107 124 5.6E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 59 70 5.6E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 147 5.6E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 SMART SM00936 266 356 1.6E-19 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 248 1.8E-59 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 266 356 1.7E-16 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 SUPERFAMILY SSF56601 3 266 2.82E-65 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 Gene3D G3DSA:2.60.410.10 269 356 2.5E-16 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 Gene3D G3DSA:3.40.710.10 18 268 2.2E-82 T 11-10-2018 Clos_1580 0b7b939bc62720dfc927fb43fc38db1b 371 SUPERFAMILY SSF69189 258 355 6.47E-16 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_0899 ed37b5bc27e4d5dda46eb3def0a082e1 190 Pfam PF05067 Manganese containing catalase 1 183 4.2E-62 T 11-10-2018 IPR007760 Manganese catalase Clos_0899 ed37b5bc27e4d5dda46eb3def0a082e1 190 SUPERFAMILY SSF47240 1 185 5.67E-71 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_0899 ed37b5bc27e4d5dda46eb3def0a082e1 190 Gene3D G3DSA:1.20.1260.10 1 187 2.4E-64 T 11-10-2018 IPR012347 Ferritin-like Clos_1102 996eabfd55d54f3a3d302c2beb6c8664 340 SMART SM00852 174 306 1.6E-22 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1102 996eabfd55d54f3a3d302c2beb6c8664 340 Pfam PF00994 Probable molybdopterin binding domain 174 304 4.0E-20 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1102 996eabfd55d54f3a3d302c2beb6c8664 340 SUPERFAMILY SSF53218 170 311 1.15E-31 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1102 996eabfd55d54f3a3d302c2beb6c8664 340 Gene3D G3DSA:3.40.980.10 148 308 6.3E-28 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1756 7bda0ea4c7516643f02c6ea1a55d5e48 612 Gene3D G3DSA:3.80.30.20 257 444 2.9E-20 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Clos_1756 7bda0ea4c7516643f02c6ea1a55d5e48 612 Pfam PF04055 Radical SAM superfamily 262 423 8.9E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1756 7bda0ea4c7516643f02c6ea1a55d5e48 612 SMART SM00729 258 485 1.6E-30 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_1756 7bda0ea4c7516643f02c6ea1a55d5e48 612 SUPERFAMILY SSF102114 222 603 1.23E-54 T 11-10-2018 Clos_1756 7bda0ea4c7516643f02c6ea1a55d5e48 612 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 7 612 1.1E-302 T 11-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM Clos_0488 ce508650f2354fc08bd5ec8943b834a4 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0488 ce508650f2354fc08bd5ec8943b834a4 156 Gene3D G3DSA:1.10.455.10 2 156 7.3E-61 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Clos_0488 ce508650f2354fc08bd5ec8943b834a4 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.326 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Clos_0488 ce508650f2354fc08bd5ec8943b834a4 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.6E-69 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Clos_0488 ce508650f2354fc08bd5ec8943b834a4 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 1.0E-65 T 11-10-2018 IPR023798 Ribosomal protein S7 domain Clos_0488 ce508650f2354fc08bd5ec8943b834a4 156 PIRSF PIRSF002122 3 156 3.7E-57 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Clos_0488 ce508650f2354fc08bd5ec8943b834a4 156 SUPERFAMILY SSF47973 3 152 6.8E-60 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Clos_0767 0b30a344b076a461b10c4ed0fa117069 162 Gene3D G3DSA:1.10.1760.20 1 159 5.5E-14 T 11-10-2018 Clos_0767 0b30a344b076a461b10c4ed0fa117069 162 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 6 153 1.0E-56 T 11-10-2018 IPR012652 Energy coupling factor transporter S component ThiW Clos_0767 0b30a344b076a461b10c4ed0fa117069 162 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 3 151 2.2E-49 T 11-10-2018 IPR012652 Energy coupling factor transporter S component ThiW Clos_0767 0b30a344b076a461b10c4ed0fa117069 162 PIRSF PIRSF024534 1 160 1.1E-57 T 11-10-2018 IPR012652 Energy coupling factor transporter S component ThiW Clos_2570 c3bb78896a1cf1fec5ddc69e89efd0ea 361 ProSitePatterns PS01348 MraY family signature 2. 164 175 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_2570 c3bb78896a1cf1fec5ddc69e89efd0ea 361 Pfam PF00953 Glycosyl transferase family 4 85 244 3.5E-43 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Clos_1357 63c079ce9caa61fc4edc682326997dcf 384 SUPERFAMILY SSF103263 1 382 1.44E-131 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Clos_1357 63c079ce9caa61fc4edc682326997dcf 384 Gene3D G3DSA:3.60.150.10 1 384 5.6E-142 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Clos_1357 63c079ce9caa61fc4edc682326997dcf 384 PIRSF PIRSF001456 1 378 4.9E-120 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Clos_1357 63c079ce9caa61fc4edc682326997dcf 384 Hamap MF_00300 Chorismate synthase [aroC]. 2 366 34.168 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Clos_1357 63c079ce9caa61fc4edc682326997dcf 384 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Clos_1357 63c079ce9caa61fc4edc682326997dcf 384 Pfam PF01264 Chorismate synthase 2 359 9.8E-113 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Clos_1357 63c079ce9caa61fc4edc682326997dcf 384 ProSitePatterns PS00788 Chorismate synthase signature 2. 126 142 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Clos_1357 63c079ce9caa61fc4edc682326997dcf 384 TIGRFAM TIGR00033 aroC: chorismate synthase 2 363 3.2E-112 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Clos_0744 2b30485fba5af6fd1208ee0cd21afc0e 295 Pfam PF03466 LysR substrate binding domain 84 283 2.0E-25 T 11-10-2018 IPR005119 LysR, substrate-binding Clos_0744 2b30485fba5af6fd1208ee0cd21afc0e 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.2E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_0744 2b30485fba5af6fd1208ee0cd21afc0e 295 Gene3D G3DSA:1.10.10.10 1 89 8.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0744 2b30485fba5af6fd1208ee0cd21afc0e 295 SUPERFAMILY SSF53850 84 281 8.38E-23 T 11-10-2018 Clos_0744 2b30485fba5af6fd1208ee0cd21afc0e 295 Gene3D G3DSA:3.40.190.290 90 294 1.4E-21 T 11-10-2018 Clos_0744 2b30485fba5af6fd1208ee0cd21afc0e 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_0744 2b30485fba5af6fd1208ee0cd21afc0e 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_0744 2b30485fba5af6fd1208ee0cd21afc0e 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_0744 2b30485fba5af6fd1208ee0cd21afc0e 295 SUPERFAMILY SSF46785 1 107 1.93E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1488 a4eacb7f0185a21e519a8a58d3f8f570 448 Gene3D G3DSA:2.60.98.20 178 329 1.4E-12 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Clos_1488 a4eacb7f0185a21e519a8a58d3f8f570 448 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 429 2.6E-91 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clos_1488 a4eacb7f0185a21e519a8a58d3f8f570 448 Pfam PF00460 Flagella basal body rod protein 5 35 7.9E-12 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Clos_1488 a4eacb7f0185a21e519a8a58d3f8f570 448 Pfam PF07559 Flagellar basal body protein FlaE 209 328 4.0E-12 T 11-10-2018 IPR011491 Flagellar hook protein FlgE Clos_1488 a4eacb7f0185a21e519a8a58d3f8f570 448 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 368 446 3.8E-22 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clos_1488 a4eacb7f0185a21e519a8a58d3f8f570 448 SUPERFAMILY SSF117143 92 408 2.62E-60 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clos_1482 3c3c5ebf6b998405a5388b328450075f 437 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 356 4.1E-76 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_1482 3c3c5ebf6b998405a5388b328450075f 437 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 90 3.4E-7 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_1482 3c3c5ebf6b998405a5388b328450075f 437 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 347 356 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_1482 3c3c5ebf6b998405a5388b328450075f 437 SMART SM00382 159 341 7.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1482 3c3c5ebf6b998405a5388b328450075f 437 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 19 436 1.3E-185 T 11-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_1482 3c3c5ebf6b998405a5388b328450075f 437 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 23 436 1.6E-207 T 11-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_1482 3c3c5ebf6b998405a5388b328450075f 437 SUPERFAMILY SSF52540 94 362 7.83E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1482 3c3c5ebf6b998405a5388b328450075f 437 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 436 4.1E-195 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_1482 3c3c5ebf6b998405a5388b328450075f 437 Gene3D G3DSA:3.40.50.12240 13 437 8.4E-157 T 11-10-2018 Clos_2375 6dc0261137f56f8d010cadab02eb01b1 244 Gene3D G3DSA:3.40.50.1580 1 242 4.5E-73 T 11-10-2018 Clos_2375 6dc0261137f56f8d010cadab02eb01b1 244 SUPERFAMILY SSF53167 3 218 6.94E-68 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Clos_2375 6dc0261137f56f8d010cadab02eb01b1 244 Pfam PF01048 Phosphorylase superfamily 17 198 5.0E-38 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Clos_1671 c5d6d0fb9e40204281e7f9c0174ab0f8 179 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 29 161 3.5E-41 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Clos_1671 c5d6d0fb9e40204281e7f9c0174ab0f8 179 Gene3D G3DSA:1.10.10.10 25 179 1.7E-58 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1671 c5d6d0fb9e40204281e7f9c0174ab0f8 179 Pfam PF02082 Transcriptional regulator 29 110 3.4E-30 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Clos_1671 c5d6d0fb9e40204281e7f9c0174ab0f8 179 SUPERFAMILY SSF46785 30 165 1.93E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1671 c5d6d0fb9e40204281e7f9c0174ab0f8 179 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 77 95 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Clos_1122 980dc1f150a4a3cdba7c8a297f9b4b19 243 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 202 1.3E-30 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Clos_1122 980dc1f150a4a3cdba7c8a297f9b4b19 243 PIRSF PIRSF000883 3 243 7.0E-66 T 11-10-2018 IPR011152 Phosphoesterase MJ0912 Clos_1122 980dc1f150a4a3cdba7c8a297f9b4b19 243 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 4 202 4.7E-19 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Clos_1122 980dc1f150a4a3cdba7c8a297f9b4b19 243 Gene3D G3DSA:3.60.21.10 2 242 2.1E-72 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_1122 980dc1f150a4a3cdba7c8a297f9b4b19 243 SUPERFAMILY SSF56300 1 240 2.99E-58 T 11-10-2018 Clos_1416 5ef0872b7650cab6488f5061ce2ddda6 144 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 121 137 1.3E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1416 5ef0872b7650cab6488f5061ce2ddda6 144 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 87 102 1.3E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1416 5ef0872b7650cab6488f5061ce2ddda6 144 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 1.3E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1416 5ef0872b7650cab6488f5061ce2ddda6 144 TIGRFAM TIGR00077 lspA: signal peptidase II 3 136 2.3E-37 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1416 5ef0872b7650cab6488f5061ce2ddda6 144 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 143 15.851 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1416 5ef0872b7650cab6488f5061ce2ddda6 144 Pfam PF01252 Signal peptidase (SPase) II 5 140 4.1E-39 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1416 5ef0872b7650cab6488f5061ce2ddda6 144 ProSitePatterns PS00855 Signal peptidases II signature. 90 102 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_0952 d6da82e440840564e151cdcbfdb6759b 281 Gene3D G3DSA:3.30.1180.10 154 281 1.2E-44 T 11-10-2018 Clos_0952 d6da82e440840564e151cdcbfdb6759b 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 280 5.1E-94 T 11-10-2018 IPR003797 DegV Clos_0952 d6da82e440840564e151cdcbfdb6759b 281 Gene3D G3DSA:3.40.50.10170 3 152 5.6E-52 T 11-10-2018 Clos_0952 d6da82e440840564e151cdcbfdb6759b 281 SUPERFAMILY SSF82549 4 281 2.09E-87 T 11-10-2018 Clos_0952 d6da82e440840564e151cdcbfdb6759b 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 1.3E-99 T 11-10-2018 IPR003797 DegV Clos_1631 97f4dd455cb57c27061a71c0699fde22 468 Gene3D G3DSA:3.10.350.10 409 468 2.9E-6 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1631 97f4dd455cb57c27061a71c0699fde22 468 SMART SM00257 419 466 0.0026 T 11-10-2018 IPR018392 LysM domain Clos_1631 97f4dd455cb57c27061a71c0699fde22 468 SUPERFAMILY SSF54106 417 465 4.71E-5 T 11-10-2018 Clos_1631 97f4dd455cb57c27061a71c0699fde22 468 Pfam PF01476 LysM domain 420 465 2.7E-4 T 11-10-2018 IPR018392 LysM domain Clos_1171 40cd64741948e23cf3fe677dee5950c6 305 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1171 40cd64741948e23cf3fe677dee5950c6 305 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 302 1.8E-72 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1171 40cd64741948e23cf3fe677dee5950c6 305 Gene3D G3DSA:3.30.2350.10 88 305 7.1E-70 T 11-10-2018 Clos_1171 40cd64741948e23cf3fe677dee5950c6 305 Pfam PF00849 RNA pseudouridylate synthase 94 245 3.5E-33 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1171 40cd64741948e23cf3fe677dee5950c6 305 SUPERFAMILY SSF55120 80 302 7.36E-68 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1371 aecbec20bb36b738ebd4e0aaa6977eb7 311 SUPERFAMILY SSF81799 114 215 1.14E-36 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Clos_1371 aecbec20bb36b738ebd4e0aaa6977eb7 311 Gene3D G3DSA:3.40.50.150 5 309 5.5E-108 T 11-10-2018 Clos_1371 aecbec20bb36b738ebd4e0aaa6977eb7 311 SUPERFAMILY SSF53335 5 311 1.16E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1371 aecbec20bb36b738ebd4e0aaa6977eb7 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 310 5.7E-124 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Clos_1371 aecbec20bb36b738ebd4e0aaa6977eb7 311 PIRSF PIRSF004486 1 311 9.1E-120 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Clos_1371 aecbec20bb36b738ebd4e0aaa6977eb7 311 Gene3D G3DSA:1.10.150.170 112 216 5.5E-108 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Clos_1371 aecbec20bb36b738ebd4e0aaa6977eb7 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 311 40.165 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Clos_1371 aecbec20bb36b738ebd4e0aaa6977eb7 311 Pfam PF01795 MraW methylase family 3 311 4.9E-127 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Clos_1368 e861726fcadadb6cc37ef7dad2975e70 244 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 233 1.1E-79 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Clos_1368 e861726fcadadb6cc37ef7dad2975e70 244 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 129 141 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Clos_1368 e861726fcadadb6cc37ef7dad2975e70 244 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 241 17.167 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Clos_1368 e861726fcadadb6cc37ef7dad2975e70 244 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 237 3.3E-66 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 3.9E-40 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 6.4E-221 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.7E-80 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 Gene3D G3DSA:3.30.470.130 1 448 1.5E-196 T 11-10-2018 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.2E-46 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 SUPERFAMILY SSF51246 331 444 1.52E-44 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 SUPERFAMILY SSF56059 83 352 3.37E-73 T 11-10-2018 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 SUPERFAMILY SSF52440 1 113 2.16E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 SMART SM00878 336 442 1.5E-58 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Clos_0395 63078a17b7f8b8e1d6d9b1b2960298bf 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 103 3.6E-40 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 Gene3D G3DSA:3.40.50.720 4 330 7.8E-155 T 11-10-2018 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 SMART SM00846 3 153 1.1E-92 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 PIRSF PIRSF000149 1 335 4.5E-140 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 SUPERFAMILY SSF55347 153 315 8.33E-70 T 11-10-2018 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 Gene3D G3DSA:3.30.360.10 152 316 7.8E-155 T 11-10-2018 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 SUPERFAMILY SSF51735 4 169 8.02E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 1.4E-39 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.4E-39 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.4E-39 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.4E-39 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.4E-39 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 4.7E-67 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0969 affe661336f73a2f22d1a1123baabf5b 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 1.3E-134 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0536 b1c1410d70533b20eb532ef756cca0e1 391 SUPERFAMILY SSF52440 10 108 2.88E-27 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Clos_0536 b1c1410d70533b20eb532ef756cca0e1 391 Pfam PF02222 ATP-grasp domain 122 292 1.6E-52 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Clos_0536 b1c1410d70533b20eb532ef756cca0e1 391 Gene3D G3DSA:3.30.470.20 193 385 4.3E-72 T 11-10-2018 Clos_0536 b1c1410d70533b20eb532ef756cca0e1 391 Gene3D G3DSA:3.30.1490.20 117 192 4.2E-22 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Clos_0536 b1c1410d70533b20eb532ef756cca0e1 391 SUPERFAMILY SSF56059 112 312 2.3E-57 T 11-10-2018 Clos_0536 b1c1410d70533b20eb532ef756cca0e1 391 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 15 375 1.2E-124 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Clos_0536 b1c1410d70533b20eb532ef756cca0e1 391 SUPERFAMILY SSF51246 317 388 3.77E-14 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Clos_0536 b1c1410d70533b20eb532ef756cca0e1 391 Gene3D G3DSA:3.40.50.20 14 116 1.7E-38 T 11-10-2018 Clos_0536 b1c1410d70533b20eb532ef756cca0e1 391 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 15 372 40.25 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 SUPERFAMILY SSF55174 5 95 1.38E-15 T 11-10-2018 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 Gene3D G3DSA:3.30.70.580 66 234 2.3E-57 T 11-10-2018 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 Pfam PF01479 S4 domain 5 48 9.2E-13 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 231 8.5E-47 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 Pfam PF00849 RNA pseudouridylate synthase 66 199 5.8E-20 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 SUPERFAMILY SSF55120 65 234 2.4E-44 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 SMART SM00363 5 63 2.2E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 Gene3D G3DSA:3.30.70.1560 133 216 2.3E-57 T 11-10-2018 Clos_0721 cfd9f8c566c2ec8b1b9f55f26b7a7598 242 Gene3D G3DSA:3.10.290.10 1 63 9.1E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 TIGRFAM TIGR01228 hutU: urocanate hydratase 102 642 1.1E-130 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 PIRSF PIRSF001423 78 661 9.3E-178 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 SUPERFAMILY SSF111326 80 650 3.01E-224 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 Pfam PF17391 Urocanase N-terminal domain 88 214 1.8E-50 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 ProSitePatterns PS01233 Urocanase signature. 538 553 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 Gene3D G3DSA:3.40.50.10730 223 440 9.9E-78 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 Pfam PF01175 Urocanase Rossmann-like domain 217 440 5.5E-82 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 Pfam PF17392 Urocanase C-terminal domain 444 640 4.8E-82 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 Hamap MF_00577 Urocanate hydratase [hutU]. 59 658 42.714 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 Gene3D G3DSA:3.40.1770.10 86 222 4.7E-43 T 11-10-2018 Clos_0579 9fab667ba423023f26be59b9bf118dc4 676 Gene3D G3DSA:3.40.1770.10 446 649 9.1E-88 T 11-10-2018 Clos_2604 85523f51132d63747834d56025934a90 2075 Gene3D G3DSA:2.60.40.10 1556 1655 2.1E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold Clos_2604 85523f51132d63747834d56025934a90 2075 SUPERFAMILY SSF81296 642 725 3.44E-10 T 11-10-2018 IPR014756 Immunoglobulin E-set Clos_2604 85523f51132d63747834d56025934a90 2075 SMART SM00429 1555 1652 0.0053 T 11-10-2018 IPR002909 IPT domain Clos_2604 85523f51132d63747834d56025934a90 2075 SMART SM00429 642 725 1.2 T 11-10-2018 IPR002909 IPT domain Clos_2604 85523f51132d63747834d56025934a90 2075 SMART SM00429 1219 1432 23.0 T 11-10-2018 IPR002909 IPT domain Clos_2604 85523f51132d63747834d56025934a90 2075 SMART SM00429 1072 1216 0.37 T 11-10-2018 IPR002909 IPT domain Clos_2604 85523f51132d63747834d56025934a90 2075 SMART SM00429 966 1067 1.5 T 11-10-2018 IPR002909 IPT domain Clos_2604 85523f51132d63747834d56025934a90 2075 Gene3D G3DSA:2.60.40.10 1656 1773 2.1E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Clos_2604 85523f51132d63747834d56025934a90 2075 SUPERFAMILY SSF81296 966 1066 9.91E-6 T 11-10-2018 IPR014756 Immunoglobulin E-set Clos_2604 85523f51132d63747834d56025934a90 2075 SUPERFAMILY SSF81296 1073 1215 1.77E-8 T 11-10-2018 IPR014756 Immunoglobulin E-set Clos_2604 85523f51132d63747834d56025934a90 2075 Gene3D G3DSA:2.60.40.10 634 730 1.9E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Clos_2604 85523f51132d63747834d56025934a90 2075 Gene3D G3DSA:2.60.40.10 961 1071 1.9E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Clos_2604 85523f51132d63747834d56025934a90 2075 SUPERFAMILY SSF81296 1558 1651 1.18E-9 T 11-10-2018 IPR014756 Immunoglobulin E-set Clos_2604 85523f51132d63747834d56025934a90 2075 SUPERFAMILY SSF49265 1769 1867 2.73E-10 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Clos_2604 85523f51132d63747834d56025934a90 2075 Gene3D G3DSA:2.60.40.10 1780 1865 2.2E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold Clos_2604 85523f51132d63747834d56025934a90 2075 SUPERFAMILY SSF81296 1672 1773 2.7E-5 T 11-10-2018 IPR014756 Immunoglobulin E-set Clos_2604 85523f51132d63747834d56025934a90 2075 Pfam PF01833 IPT/TIG domain 1073 1215 2.8E-9 T 11-10-2018 IPR002909 IPT domain Clos_2604 85523f51132d63747834d56025934a90 2075 Pfam PF01833 IPT/TIG domain 643 715 5.2E-9 T 11-10-2018 IPR002909 IPT domain Clos_2604 85523f51132d63747834d56025934a90 2075 Pfam PF01833 IPT/TIG domain 1557 1651 5.9E-13 T 11-10-2018 IPR002909 IPT domain Clos_2604 85523f51132d63747834d56025934a90 2075 Pfam PF01833 IPT/TIG domain 967 1066 7.3E-6 T 11-10-2018 IPR002909 IPT domain Clos_2604 85523f51132d63747834d56025934a90 2075 SMART SM00060 1779 1854 0.0021 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 565 5.5E-218 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 863 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 Gene3D G3DSA:1.10.730.10 5 743 0.0 T 11-10-2018 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 SUPERFAMILY SSF52374 4 576 2.33E-148 T 11-10-2018 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 SUPERFAMILY SSF50677 194 345 3.14E-64 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 SUPERFAMILY SSF46589 816 880 1.62E-16 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 Gene3D G3DSA:1.10.287.380 809 881 9.9E-17 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 816 881 3.2E-20 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 881 16.055 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 SUPERFAMILY SSF47323 578 831 4.3E-72 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 Pfam PF08264 Anticodon-binding domain of tRNA 609 755 1.1E-46 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 PRINTS PR00986 Valyl-tRNA synthetase signature 478 496 8.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 PRINTS PR00986 Valyl-tRNA synthetase signature 234 251 8.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 8.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 PRINTS PR00986 Valyl-tRNA synthetase signature 349 362 8.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 PRINTS PR00986 Valyl-tRNA synthetase signature 447 468 8.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Clos_2038 3bbe0180d47c3716aec4939828f97223 884 Gene3D G3DSA:3.40.50.620 25 527 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_2038 3bbe0180d47c3716aec4939828f97223 884 Gene3D G3DSA:3.90.740.10 179 346 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 33 44 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 SUPERFAMILY SSF52374 10 334 3.49E-101 T 11-10-2018 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 Gene3D G3DSA:3.90.800.10 99 207 6.5E-104 T 11-10-2018 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 548 51.246 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 338 527 4.1E-60 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 Gene3D G3DSA:1.10.1160.10 259 337 5.3E-35 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 Gene3D G3DSA:3.40.50.620 27 245 6.5E-104 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 548 2.8E-230 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 218 3.6E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 30 42 3.6E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 59 72 3.6E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 55 3.6E-11 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 Gene3D G3DSA:2.40.240.10 338 545 9.0E-81 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 27 335 4.2E-112 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 Gene3D G3DSA:2.40.240.10 346 464 9.0E-81 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_0176 9c4ed9204f993a9dd7c5c31197f66a28 550 SUPERFAMILY SSF50715 338 546 1.52E-76 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_0314 db94a70abe6666d80b59a4051a723fd7 417 SUPERFAMILY SSF53807 14 409 2.42E-80 T 11-10-2018 Clos_0314 db94a70abe6666d80b59a4051a723fd7 417 Gene3D G3DSA:3.40.50.1980 12 146 2.3E-33 T 11-10-2018 Clos_0314 db94a70abe6666d80b59a4051a723fd7 417 Gene3D G3DSA:3.40.50.1980 147 257 2.6E-25 T 11-10-2018 Clos_0314 db94a70abe6666d80b59a4051a723fd7 417 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 13 409 1.7E-85 T 11-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Clos_0314 db94a70abe6666d80b59a4051a723fd7 417 Gene3D G3DSA:3.40.50.1980 285 411 5.8E-10 T 11-10-2018 Clos_2057 561c6646c118c062f2ff2988eced6d11 257 Pfam PF00583 Acetyltransferase (GNAT) family 151 244 1.1E-5 T 11-10-2018 IPR000182 GNAT domain Clos_2057 561c6646c118c062f2ff2988eced6d11 257 Gene3D G3DSA:3.40.630.30 117 249 1.7E-53 T 11-10-2018 Clos_2057 561c6646c118c062f2ff2988eced6d11 257 Gene3D G3DSA:3.40.630.80 12 257 1.7E-53 T 11-10-2018 Clos_2057 561c6646c118c062f2ff2988eced6d11 257 SUPERFAMILY SSF55729 134 251 4.43E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0320 2c771ea7f0b08c302759f166c7ff9d13 267 Gene3D G3DSA:3.40.50.300 1 255 9.5E-66 T 11-10-2018 Clos_0320 2c771ea7f0b08c302759f166c7ff9d13 267 SMART SM00382 26 215 1.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0320 2c771ea7f0b08c302759f166c7ff9d13 267 Pfam PF00005 ABC transporter 17 165 1.5E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0320 2c771ea7f0b08c302759f166c7ff9d13 267 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0320 2c771ea7f0b08c302759f166c7ff9d13 267 SUPERFAMILY SSF52540 1 228 2.28E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1614 b6ce5cfbbf05bafb56bec91fd2d240fd 130 Pfam PF03780 Asp23 family, cell envelope-related function 9 113 9.1E-39 T 11-10-2018 IPR005531 Alkaline shock protein Asp23 Clos_0266 946c227d6f8088e38ee09f3e2d08e54b 283 SUPERFAMILY SSF53850 45 282 9.37E-74 T 11-10-2018 Clos_0266 946c227d6f8088e38ee09f3e2d08e54b 283 Pfam PF12849 PBP superfamily domain 37 270 7.0E-42 T 11-10-2018 IPR024370 PBP domain Clos_0266 946c227d6f8088e38ee09f3e2d08e54b 283 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 281 2.3E-75 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 Clos_0266 946c227d6f8088e38ee09f3e2d08e54b 283 Gene3D G3DSA:3.40.190.10 120 245 4.6E-83 T 11-10-2018 Clos_0266 946c227d6f8088e38ee09f3e2d08e54b 283 Gene3D G3DSA:3.40.190.10 49 275 4.6E-83 T 11-10-2018 Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 Gene3D G3DSA:1.10.1660.10 1 144 2.7E-41 T 11-10-2018 Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 SMART SM00422 3 72 3.3E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 Gene3D G3DSA:1.10.490.50 163 253 1.6E-26 T 11-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 SUPERFAMILY SSF89082 163 251 1.31E-29 T 11-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 SUPERFAMILY SSF46955 3 107 2.53E-27 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.0E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.0E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 1.0E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 Pfam PF13411 MerR HTH family regulatory protein 3 70 7.1E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0665 426cb05409d95d0d9f187c5aac8ac45f 254 Pfam PF07739 TipAS antibiotic-recognition domain 135 249 4.8E-37 T 11-10-2018 IPR012925 TipAS antibiotic-recognition domain Clos_1410 9afbad4b281f0d4ac7042f78c26aa75c 262 Gene3D G3DSA:3.30.1370.160 17 84 8.6E-12 T 11-10-2018 Clos_1410 9afbad4b281f0d4ac7042f78c26aa75c 262 SMART SM00363 186 246 1.3E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1410 9afbad4b281f0d4ac7042f78c26aa75c 262 Gene3D G3DSA:3.10.290.10 184 242 1.2E-11 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_1410 9afbad4b281f0d4ac7042f78c26aa75c 262 Gene3D G3DSA:3.30.70.330 88 171 2.4E-23 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Clos_1410 9afbad4b281f0d4ac7042f78c26aa75c 262 SUPERFAMILY SSF55174 64 257 4.32E-28 T 11-10-2018 Clos_1410 9afbad4b281f0d4ac7042f78c26aa75c 262 Pfam PF01479 S4 domain 187 232 1.0E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0036 0790e59d1e301eab7e2baeffa2843c63 137 PIRSF PIRSF002070 1 136 7.6E-40 T 11-10-2018 Clos_0036 0790e59d1e301eab7e2baeffa2843c63 137 Gene3D G3DSA:2.40.50.140 1 108 9.7E-44 T 11-10-2018 Clos_0036 0790e59d1e301eab7e2baeffa2843c63 137 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 107 1.5E-37 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Clos_0036 0790e59d1e301eab7e2baeffa2843c63 137 Pfam PF00436 Single-strand binding protein family 1 99 2.9E-37 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Clos_0036 0790e59d1e301eab7e2baeffa2843c63 137 SUPERFAMILY SSF50249 1 137 1.58E-48 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0036 0790e59d1e301eab7e2baeffa2843c63 137 Hamap MF_00984 Single-stranded DNA-binding protein. 1 103 34.431 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Clos_1446 06894e5791846e837fd08ad2a5de5fb1 424 Pfam PF05636 HIGH Nucleotidyl Transferase 1 404 1.4E-145 T 11-10-2018 IPR008513 Uncharacterised protein family UPF0348 Clos_1446 06894e5791846e837fd08ad2a5de5fb1 424 Hamap MF_01539 UPF0348 protein . 2 419 37.937 T 11-10-2018 IPR008513 Uncharacterised protein family UPF0348 Clos_1446 06894e5791846e837fd08ad2a5de5fb1 424 SUPERFAMILY SSF52374 2 244 7.19E-18 T 11-10-2018 Clos_1446 06894e5791846e837fd08ad2a5de5fb1 424 Gene3D G3DSA:3.40.50.620 1 253 2.1E-41 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0673 3496fb754a420c5b38df3f489349a736 463 Gene3D G3DSA:3.40.50.720 229 363 1.7E-39 T 11-10-2018 Clos_0673 3496fb754a420c5b38df3f489349a736 463 SUPERFAMILY SSF51735 230 372 4.84E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0673 3496fb754a420c5b38df3f489349a736 463 Pfam PF02254 TrkA-N domain 231 347 1.4E-26 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Clos_0673 3496fb754a420c5b38df3f489349a736 463 Pfam PF02254 TrkA-N domain 3 122 8.9E-24 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Clos_0673 3496fb754a420c5b38df3f489349a736 463 Gene3D G3DSA:3.30.70.1450 139 226 1.6E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Clos_0673 3496fb754a420c5b38df3f489349a736 463 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.7E-12 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Clos_0673 3496fb754a420c5b38df3f489349a736 463 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.7E-12 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Clos_0673 3496fb754a420c5b38df3f489349a736 463 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.7E-12 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Clos_0673 3496fb754a420c5b38df3f489349a736 463 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.7E-12 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Clos_0673 3496fb754a420c5b38df3f489349a736 463 Gene3D G3DSA:3.40.50.720 2 135 2.6E-39 T 11-10-2018 Clos_0673 3496fb754a420c5b38df3f489349a736 463 Pfam PF02080 TrkA-C domain 378 443 3.5E-14 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Clos_0673 3496fb754a420c5b38df3f489349a736 463 Pfam PF02080 TrkA-C domain 155 219 4.7E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Clos_0673 3496fb754a420c5b38df3f489349a736 463 SUPERFAMILY SSF116726 147 217 1.05E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Clos_0673 3496fb754a420c5b38df3f489349a736 463 SUPERFAMILY SSF116726 361 440 1.44E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Clos_0673 3496fb754a420c5b38df3f489349a736 463 Gene3D G3DSA:3.30.70.1450 364 447 4.1E-19 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Clos_0673 3496fb754a420c5b38df3f489349a736 463 SUPERFAMILY SSF51735 1 147 4.97E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1365 605ab0671d5cfeac2df6e1687627f776 190 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 11 188 1.8E-39 T 11-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 Clos_1365 605ab0671d5cfeac2df6e1687627f776 190 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 32 186 3.8E-33 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 Gene3D G3DSA:1.10.287.130 231 310 4.7E-22 T 11-10-2018 Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 SMART SM00388 246 311 2.4E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 SUPERFAMILY SSF55785 120 229 2.09E-8 T 11-10-2018 IPR035965 PAS domain superfamily Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 Gene3D G3DSA:3.30.565.10 311 464 2.0E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 Gene3D G3DSA:3.30.450.20 112 229 1.1E-11 T 11-10-2018 Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 SUPERFAMILY SSF47384 240 309 2.16E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 457 1.6E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 307 9.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 1.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 1.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 1.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 237 2.8E-6 T 11-10-2018 IPR000014 PAS domain Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 SMART SM00387 352 459 1.5E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1078 38bbd21d3e3905de55933423f8b0a7e6 465 SUPERFAMILY SSF55874 302 459 2.1E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Gene3D G3DSA:1.10.150.390 1102 1164 1.9E-29 T 11-10-2018 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Pfam PF04983 RNA polymerase Rpb1, domain 3 479 636 3.4E-27 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Gene3D G3DSA:1.10.274.100 547 632 6.8E-22 T 11-10-2018 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 9 1153 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Gene3D G3DSA:1.10.40.90 364 406 8.4E-24 T 11-10-2018 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Gene3D G3DSA:1.10.132.30 633 767 9.3E-58 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 332 5.7E-92 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 SUPERFAMILY SSF64484 5 1153 0.0 T 11-10-2018 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Gene3D G3DSA:1.10.274.100 480 546 1.9E-25 T 11-10-2018 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Gene3D G3DSA:2.40.50.100 939 1001 3.2E-71 T 11-10-2018 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Pfam PF04998 RNA polymerase Rpb1, domain 5 743 1101 1.1E-67 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Pfam PF05000 RNA polymerase Rpb1, domain 4 665 727 1.2E-13 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1163 18.655 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Pfam PF00623 RNA polymerase Rpb1, domain 2 334 381 2.7E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Pfam PF00623 RNA polymerase Rpb1, domain 2 380 475 9.0E-29 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 SMART SM00663 225 504 7.5E-186 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0485 e1cfe91ba4859ac0bac9327a436d7d86 1179 Gene3D G3DSA:1.10.1790.20 923 1100 3.2E-71 T 11-10-2018 Clos_1191 eb2410438d2695d8d21a4da0ea6e7454 56 Gene3D G3DSA:1.10.287.540 1 55 1.5E-21 T 11-10-2018 Clos_1191 eb2410438d2695d8d21a4da0ea6e7454 56 SUPERFAMILY SSF158221 2 42 7.98E-13 T 11-10-2018 Clos_1191 eb2410438d2695d8d21a4da0ea6e7454 56 Hamap MF_01103 UPF0291 protein . 2 56 12.237 T 11-10-2018 IPR009242 Protein of unknown function DUF896 Clos_1191 eb2410438d2695d8d21a4da0ea6e7454 56 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 56 2.3E-19 T 11-10-2018 IPR009242 Protein of unknown function DUF896 Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 SUPERFAMILY SSF56003 114 769 1.57E-155 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 Gene3D G3DSA:3.30.365.10 374 766 2.9E-99 T 11-10-2018 Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 SUPERFAMILY SSF54665 2 143 1.18E-40 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 Gene3D G3DSA:3.30.365.10 16 287 1.3E-96 T 11-10-2018 Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 Gene3D G3DSA:3.30.365.10 454 626 2.9E-99 T 11-10-2018 Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 710 5.4E-137 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 Gene3D G3DSA:3.30.365.10 123 363 1.3E-96 T 11-10-2018 Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 Gene3D G3DSA:3.90.1170.50 33 122 1.3E-96 T 11-10-2018 Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 SMART SM01008 18 122 2.7E-40 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Clos_0264 ba6309479e474a0b2e38ac7756cdddd3 778 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 122 4.1E-23 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Clos_1572 9b75c5c086eb113938fa1e53752562b1 70 Gene3D G3DSA:3.30.70.20 2 38 3.7E-5 T 11-10-2018 Clos_1572 9b75c5c086eb113938fa1e53752562b1 70 Pfam PF13187 4Fe-4S dicluster domain 16 61 1.2E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1572 9b75c5c086eb113938fa1e53752562b1 70 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 46 57 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_1572 9b75c5c086eb113938fa1e53752562b1 70 Gene3D G3DSA:3.30.70.3270 39 70 1.7E-5 T 11-10-2018 Clos_1572 9b75c5c086eb113938fa1e53752562b1 70 SUPERFAMILY SSF54862 9 65 5.07E-16 T 11-10-2018 Clos_0897 498a374a0875e688638471b99e4a9a3c 317 SUPERFAMILY SSF58104 29 310 1.18E-52 T 11-10-2018 Clos_0897 498a374a0875e688638471b99e4a9a3c 317 Gene3D G3DSA:1.10.287.950 8 317 1.3E-53 T 11-10-2018 Clos_0897 498a374a0875e688638471b99e4a9a3c 317 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 129 273 1.3E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0897 498a374a0875e688638471b99e4a9a3c 317 SMART SM00283 53 315 7.1E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0963 0d215defc5a1d1fe8e65fa53dad0c02f 242 Pfam PF04055 Radical SAM superfamily 28 175 3.9E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_0963 0d215defc5a1d1fe8e65fa53dad0c02f 242 Pfam PF13353 4Fe-4S single cluster domain 19 126 5.5E-17 T 11-10-2018 Clos_0963 0d215defc5a1d1fe8e65fa53dad0c02f 242 ProSitePatterns PS01087 Radical activating enzymes signature. 21 42 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Clos_0963 0d215defc5a1d1fe8e65fa53dad0c02f 242 SUPERFAMILY SSF102114 30 227 3.92E-23 T 11-10-2018 Clos_0963 0d215defc5a1d1fe8e65fa53dad0c02f 242 Gene3D G3DSA:3.20.20.70 9 239 1.8E-51 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 6 518 3.5E-220 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 Gene3D G3DSA:3.40.449.10 27 211 1.2E-220 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 Gene3D G3DSA:3.90.228.20 212 511 1.2E-220 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 Gene3D G3DSA:2.170.8.10 37 328 1.2E-220 T 11-10-2018 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 PIRSF PIRSF006294 1 525 1.5E-236 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 SUPERFAMILY SSF68923 5 210 3.66E-80 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 11 525 54.748 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 Pfam PF01293 Phosphoenolpyruvate carboxykinase 17 478 1.5E-220 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 248 263 - T 11-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Clos_0884 3659ed43cbe6afbe01131a7fd6895c11 526 SUPERFAMILY SSF53795 211 525 1.56E-134 T 11-10-2018 Clos_0908 e03d28012d0161674208573ba737cd25 783 Pfam PF13654 AAA domain 26 543 2.7E-190 T 11-10-2018 Clos_0908 e03d28012d0161674208573ba737cd25 783 Gene3D G3DSA:3.30.230.10 545 781 4.8E-95 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_0908 e03d28012d0161674208573ba737cd25 783 SUPERFAMILY SSF54211 567 760 2.73E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_0908 e03d28012d0161674208573ba737cd25 783 Gene3D G3DSA:1.10.8.60 454 540 3.7E-12 T 11-10-2018 Clos_0908 e03d28012d0161674208573ba737cd25 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 710 728 1.8E-14 T 11-10-2018 Clos_0908 e03d28012d0161674208573ba737cd25 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 569 585 1.8E-14 T 11-10-2018 Clos_0908 e03d28012d0161674208573ba737cd25 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 680 699 1.8E-14 T 11-10-2018 Clos_0908 e03d28012d0161674208573ba737cd25 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 650 669 1.8E-14 T 11-10-2018 Clos_0908 e03d28012d0161674208573ba737cd25 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 1.8E-14 T 11-10-2018 Clos_0908 e03d28012d0161674208573ba737cd25 783 SUPERFAMILY SSF52540 35 542 1.23E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0908 e03d28012d0161674208573ba737cd25 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 567 756 7.7E-10 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Clos_0908 e03d28012d0161674208573ba737cd25 783 Gene3D G3DSA:3.40.50.300 5 182 1.4E-27 T 11-10-2018 Clos_0908 e03d28012d0161674208573ba737cd25 783 Gene3D G3DSA:3.40.50.300 248 453 1.5E-59 T 11-10-2018 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 90 114 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 Pfam PF08245 Mur ligase middle domain 92 303 3.2E-46 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 Pfam PF01225 Mur ligase family, catalytic domain 7 72 7.9E-9 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 SUPERFAMILY SSF53623 83 321 2.09E-63 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 SUPERFAMILY SSF53244 324 464 2.44E-19 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 SUPERFAMILY SSF63418 4 81 1.44E-19 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 6 459 2.3E-102 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 Gene3D G3DSA:3.40.1190.10 83 327 1.0E-73 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 Gene3D G3DSA:3.90.190.20 328 473 5.1E-15 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 Gene3D G3DSA:3.40.1390.10 2 81 1.1E-22 T 11-10-2018 Clos_2017 16dfae1a5c9e3b37c42f5a4451326c1c 501 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 388 2.0E-9 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Clos_2873 af3dfe98d9d7043d757ff8ee5a879a7c 206 SMART SM00393 126 205 1.2E-16 T 11-10-2018 IPR001374 R3H domain GO:0003676 Clos_2873 af3dfe98d9d7043d757ff8ee5a879a7c 206 Pfam PF01424 R3H domain 144 202 3.7E-15 T 11-10-2018 IPR001374 R3H domain GO:0003676 Clos_2873 af3dfe98d9d7043d757ff8ee5a879a7c 206 Gene3D G3DSA:3.30.30.80 1 56 1.1E-17 T 11-10-2018 IPR038247 Jag, N-terminal domain superfamily Clos_2873 af3dfe98d9d7043d757ff8ee5a879a7c 206 Pfam PF14804 Jag N-terminus 8 56 1.4E-19 T 11-10-2018 IPR032782 Jag, N-terminal Clos_2873 af3dfe98d9d7043d757ff8ee5a879a7c 206 Pfam PF13083 KH domain 63 128 9.4E-21 T 11-10-2018 Clos_2873 af3dfe98d9d7043d757ff8ee5a879a7c 206 Gene3D G3DSA:3.30.1370.50 141 206 1.4E-29 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 Clos_2873 af3dfe98d9d7043d757ff8ee5a879a7c 206 SMART SM01245 5 57 7.2E-21 T 11-10-2018 IPR032782 Jag, N-terminal Clos_2873 af3dfe98d9d7043d757ff8ee5a879a7c 206 Gene3D G3DSA:3.30.300.20 58 140 3.7E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Clos_2873 af3dfe98d9d7043d757ff8ee5a879a7c 206 SUPERFAMILY SSF82708 158 202 1.75E-7 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 Clos_1796 f82701c9a81f571aeb59f2d7a41cbcde 111 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 4 108 2.8E-37 T 11-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 Clos_1796 f82701c9a81f571aeb59f2d7a41cbcde 111 Pfam PF01740 STAS domain 6 99 1.4E-16 T 11-10-2018 IPR002645 STAS domain Clos_1796 f82701c9a81f571aeb59f2d7a41cbcde 111 Gene3D G3DSA:3.30.750.24 4 111 4.5E-27 T 11-10-2018 IPR036513 STAS domain superfamily Clos_1796 f82701c9a81f571aeb59f2d7a41cbcde 111 SUPERFAMILY SSF52091 3 110 5.49E-25 T 11-10-2018 IPR036513 STAS domain superfamily Clos_1796 f82701c9a81f571aeb59f2d7a41cbcde 111 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 102 8.0E-26 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Clos_2322 69feeb54b0ee206620f2b88b4d07842e 251 Pfam PF13649 Methyltransferase domain 40 135 4.7E-10 T 11-10-2018 Clos_2322 69feeb54b0ee206620f2b88b4d07842e 251 SUPERFAMILY SSF53335 11 239 1.88E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2322 69feeb54b0ee206620f2b88b4d07842e 251 Gene3D G3DSA:3.40.50.150 37 236 1.6E-30 T 11-10-2018 Clos_2322 69feeb54b0ee206620f2b88b4d07842e 251 Gene3D G3DSA:2.20.25.570 143 208 1.6E-30 T 11-10-2018 Clos_0028 6f1d9cf4f948ef6945830245f4675e96 627 TIGRFAM TIGR04480 D_pro_red_PrdA: D-proline reductase (dithiol), PrdA proprotein 5 598 0.0 T 11-10-2018 IPR031002 D-proline reductase, PrdA proprotein GO:0050002|GO:0055114 KEGG: 00330+1.21.4.1 Clos_0028 6f1d9cf4f948ef6945830245f4675e96 627 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 180 522 3.7E-25 T 11-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Clos_2832 82e9a06a4dc58236849b02e1e5031be7 121 Gene3D G3DSA:2.40.50.1020 8 114 3.5E-12 T 11-10-2018 Clos_2832 82e9a06a4dc58236849b02e1e5031be7 121 SMART SM00850 20 119 1.5E-14 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_2832 82e9a06a4dc58236849b02e1e5031be7 121 Pfam PF04397 LytTr DNA-binding domain 23 118 5.6E-16 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_1899 7304441e43f23518eaa1d43be89a675c 705 Gene3D G3DSA:3.30.565.10 2 215 3.1E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1899 7304441e43f23518eaa1d43be89a675c 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 57 71 2.5E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1899 7304441e43f23518eaa1d43be89a675c 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 676 2.5E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1899 7304441e43f23518eaa1d43be89a675c 705 Gene3D G3DSA:3.30.565.10 544 703 3.4E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1899 7304441e43f23518eaa1d43be89a675c 705 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 589 703 9.7E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1899 7304441e43f23518eaa1d43be89a675c 705 SUPERFAMILY SSF55874 12 186 1.7E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1899 7304441e43f23518eaa1d43be89a675c 705 SUPERFAMILY SSF55874 548 680 2.88E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1899 7304441e43f23518eaa1d43be89a675c 705 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 174 1.3E-29 T 11-10-2018 Clos_1509 fa62d0426b839995f40b9c82c9aa956f 161 Pfam PF03975 CheD chemotactic sensory transduction 48 153 3.4E-39 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Clos_1509 fa62d0426b839995f40b9c82c9aa956f 161 Gene3D G3DSA:3.30.1330.200 2 161 6.7E-52 T 11-10-2018 IPR038592 CheD-like superfamily Clos_1509 fa62d0426b839995f40b9c82c9aa956f 161 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 157 28.018 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Clos_1509 fa62d0426b839995f40b9c82c9aa956f 161 SUPERFAMILY SSF64438 4 159 3.43E-51 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 Pfam PF01628 HrcA protein C terminal domain 104 323 2.4E-60 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 SUPERFAMILY SSF46785 1 81 1.09E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 Gene3D G3DSA:3.30.390.60 128 228 1.4E-54 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 336 1.4E-99 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 PIRSF PIRSF005485 1 341 6.4E-108 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 Gene3D G3DSA:3.30.450.40 104 336 1.4E-54 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 SUPERFAMILY SSF55781 71 339 4.32E-58 T 11-10-2018 Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 330 29.91 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 Gene3D G3DSA:1.10.10.10 1 85 5.7E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1231 ae796de1e510db56ddefd0fa395692bb 343 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 72 1.7E-4 T 11-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 Gene3D G3DSA:3.50.50.60 6 403 1.3E-128 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 Gene3D G3DSA:1.10.8.260 273 337 1.3E-128 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 SUPERFAMILY SSF51905 1 409 3.57E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 SUPERFAMILY SSF160996 193 355 1.96E-39 T 11-10-2018 Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.0E-8 T 11-10-2018 Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 384 2.0E-8 T 11-10-2018 Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.0E-8 T 11-10-2018 Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 Pfam PF03486 HI0933-like protein 4 407 1.3E-134 T 11-10-2018 Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 Gene3D G3DSA:2.40.30.10 192 354 1.3E-128 T 11-10-2018 Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 407 4.0E-151 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.1E-6 T 11-10-2018 Clos_1566 4d3886453839641d09d60dff1c9b7a9b 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 2.1E-6 T 11-10-2018 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 Gene3D G3DSA:1.20.1480.50 267 365 3.6E-6 T 11-10-2018 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 SMART SM00283 387 662 3.4E-60 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 Gene3D G3DSA:3.30.450.20 73 182 1.7E-25 T 11-10-2018 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 SUPERFAMILY SSF103190 64 188 1.9E-12 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 Gene3D G3DSA:1.10.287.950 390 662 5.6E-64 T 11-10-2018 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 460 615 2.3E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 SUPERFAMILY SSF58104 326 662 2.75E-66 T 11-10-2018 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 Pfam PF02743 Cache domain 36 268 2.3E-37 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 SMART SM00304 603 659 9.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 SMART SM00304 306 358 1.1E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0250 7a0358305d69c58a31833aa02cfcd65e 663 Pfam PF00672 HAMP domain 307 354 9.6E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_2008 9e8c9bc10a35c8361363db61f9485cfa 305 SUPERFAMILY SSF56601 2 305 7.12E-112 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_2008 9e8c9bc10a35c8361363db61f9485cfa 305 Hamap MF_00313 Glutaminase [glsA]. 1 305 47.155 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Clos_2008 9e8c9bc10a35c8361363db61f9485cfa 305 Gene3D G3DSA:3.40.710.10 1 305 4.6E-118 T 11-10-2018 Clos_2008 9e8c9bc10a35c8361363db61f9485cfa 305 Pfam PF04960 Glutaminase 19 305 4.8E-119 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Clos_2008 9e8c9bc10a35c8361363db61f9485cfa 305 TIGRFAM TIGR03814 Gln_ase: glutaminase A 5 305 2.4E-125 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Clos_0992 3408745ba3f177c4e81faccb625ffee8 457 SUPERFAMILY SSF102114 33 336 1.96E-45 T 11-10-2018 Clos_0992 3408745ba3f177c4e81faccb625ffee8 457 TIGRFAM TIGR03955 rSAM_HydG: [FeFe] hydrogenase H-cluster radical SAM maturase HydG 2 455 9.9E-188 T 11-10-2018 IPR024007 [FeFe]-hydrogenase maturation HydG, radical SAM Clos_0992 3408745ba3f177c4e81faccb625ffee8 457 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 261 364 1.4E-23 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Clos_0992 3408745ba3f177c4e81faccb625ffee8 457 SMART SM00876 261 368 3.0E-31 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Clos_0992 3408745ba3f177c4e81faccb625ffee8 457 SMART SM00729 73 290 0.0054 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_0992 3408745ba3f177c4e81faccb625ffee8 457 Gene3D G3DSA:3.20.20.70 5 380 1.8E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0152 aadd69288fd9b903216550e47be23cb1 277 SUPERFAMILY SSF53098 119 271 3.64E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_0152 aadd69288fd9b903216550e47be23cb1 277 Pfam PF00665 Integrase core domain 120 228 5.4E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Clos_0152 aadd69288fd9b903216550e47be23cb1 277 Gene3D G3DSA:3.30.420.10 120 275 5.9E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_0152 aadd69288fd9b903216550e47be23cb1 277 Pfam PF13276 HTH-like domain 35 87 1.8E-16 T 11-10-2018 IPR025948 HTH-like domain Clos_0736 aadd69288fd9b903216550e47be23cb1 277 SUPERFAMILY SSF53098 119 271 3.64E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_0736 aadd69288fd9b903216550e47be23cb1 277 Pfam PF00665 Integrase core domain 120 228 5.4E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Clos_0736 aadd69288fd9b903216550e47be23cb1 277 Gene3D G3DSA:3.30.420.10 120 275 5.9E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_0736 aadd69288fd9b903216550e47be23cb1 277 Pfam PF13276 HTH-like domain 35 87 1.8E-16 T 11-10-2018 IPR025948 HTH-like domain Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 SUPERFAMILY SSF143414 3 94 5.76E-26 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 PIRSF PIRSF034834 1 180 6.3E-54 T 11-10-2018 IPR011238 Polyhedral organelle shell protein PduT Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 Gene3D G3DSA:3.30.70.1710 80 179 7.5E-25 T 11-10-2018 Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 Pfam PF00936 BMC domain 4 76 3.8E-23 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 Pfam PF00936 BMC domain 96 171 2.3E-18 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 SUPERFAMILY SSF143414 95 179 2.35E-18 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 SMART SM00877 3 77 6.4E-26 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 SMART SM00877 95 171 4.9E-21 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 Gene3D G3DSA:3.30.70.1710 1 79 7.4E-27 T 11-10-2018 Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 154 2.0E-14 T 11-10-2018 Clos_2390 189a9a400a8f4d2eb90d047686f82e21 180 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 5.0E-22 T 11-10-2018 Clos_0651 26f0911ec0c2a30c521d652743b12032 364 Gene3D G3DSA:1.10.10.10 1 50 3.4E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0651 26f0911ec0c2a30c521d652743b12032 364 SUPERFAMILY SSF46785 1 53 2.31E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0651 26f0911ec0c2a30c521d652743b12032 364 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 46 1.2E-11 T 11-10-2018 Clos_0651 26f0911ec0c2a30c521d652743b12032 364 SUPERFAMILY SSF53613 60 355 6.86E-56 T 11-10-2018 IPR029056 Ribokinase-like Clos_0651 26f0911ec0c2a30c521d652743b12032 364 Gene3D G3DSA:3.40.1190.20 54 362 1.4E-74 T 11-10-2018 IPR029056 Ribokinase-like Clos_0651 26f0911ec0c2a30c521d652743b12032 364 Pfam PF00294 pfkB family carbohydrate kinase 59 347 3.2E-47 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 37.987 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 SUPERFAMILY SSF56053 84 178 3.36E-37 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 Gene3D G3DSA:3.90.930.12 1 83 5.4E-30 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 2.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 PRINTS PR00059 Ribosomal protein L6 signature 72 97 2.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 2.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 PIRSF PIRSF002162 1 178 2.3E-51 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 Gene3D G3DSA:3.90.930.12 84 179 2.3E-40 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 5.4E-74 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 Pfam PF00347 Ribosomal protein L6 11 83 1.6E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 Pfam PF00347 Ribosomal protein L6 91 165 6.3E-19 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0507 1fe03af33a1e2457dc53a9f5ee47e858 179 SUPERFAMILY SSF56053 1 83 1.75E-24 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0070 97241025756c7fd755671a965abb4b5b 592 Gene3D G3DSA:3.40.50.970 349 523 1.2E-22 T 11-10-2018 Clos_0070 97241025756c7fd755671a965abb4b5b 592 SUPERFAMILY SSF52518 336 522 3.17E-32 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_0070 97241025756c7fd755671a965abb4b5b 592 SUPERFAMILY SSF52518 3 219 6.55E-60 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_0070 97241025756c7fd755671a965abb4b5b 592 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 180 1.6E-12 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Clos_0070 97241025756c7fd755671a965abb4b5b 592 TIGRFAM TIGR03336 IOR_alpha: indolepyruvate ferredoxin oxidoreductase, alpha subunit 1 587 4.6E-218 T 11-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Clos_0070 97241025756c7fd755671a965abb4b5b 592 Pfam PF12838 4Fe-4S dicluster domain 541 586 2.7E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0070 97241025756c7fd755671a965abb4b5b 592 Gene3D G3DSA:3.30.70.20 524 592 3.9E-11 T 11-10-2018 Clos_0070 97241025756c7fd755671a965abb4b5b 592 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 364 510 1.4E-28 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Clos_0070 97241025756c7fd755671a965abb4b5b 592 SUPERFAMILY SSF54862 513 590 1.35E-15 T 11-10-2018 Clos_0070 97241025756c7fd755671a965abb4b5b 592 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 572 583 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0070 97241025756c7fd755671a965abb4b5b 592 PIRSF PIRSF006439 1 592 2.0E-232 T 11-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Clos_0070 97241025756c7fd755671a965abb4b5b 592 Gene3D G3DSA:3.40.50.970 1 180 5.5E-56 T 11-10-2018 Clos_1226 b2d9035f312b579333b553caf869c888 324 TIGRFAM TIGR01441 GPR: GPR endopeptidase 5 251 3.3E-97 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Clos_1226 b2d9035f312b579333b553caf869c888 324 Hamap MF_00626 Germination protease [gpr]. 1 324 156.274 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Clos_1226 b2d9035f312b579333b553caf869c888 324 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 2 306 1.0E-122 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Clos_1226 b2d9035f312b579333b553caf869c888 324 Gene3D G3DSA:3.40.50.1450 1 324 1.6E-125 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily Clos_1226 b2d9035f312b579333b553caf869c888 324 PIRSF PIRSF019549 1 256 3.2E-107 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Clos_1226 b2d9035f312b579333b553caf869c888 324 PIRSF PIRSF019549 250 324 4.2E-23 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Clos_1226 b2d9035f312b579333b553caf869c888 324 SUPERFAMILY SSF53163 2 324 2.53E-115 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily Clos_1226 b2d9035f312b579333b553caf869c888 324 Pfam PF03418 Germination protease 9 255 6.8E-92 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Clos_2806 24e89092768da9bf66235d7be7fb4f7d 196 Gene3D G3DSA:1.20.1260.10 1 151 4.6E-55 T 11-10-2018 IPR012347 Ferritin-like Clos_2806 24e89092768da9bf66235d7be7fb4f7d 196 Gene3D G3DSA:2.20.28.10 152 196 1.9E-20 T 11-10-2018 Clos_2806 24e89092768da9bf66235d7be7fb4f7d 196 Pfam PF02915 Rubrerythrin 12 144 3.3E-31 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Clos_2806 24e89092768da9bf66235d7be7fb4f7d 196 SUPERFAMILY SSF57802 153 195 2.86E-12 T 11-10-2018 Clos_2806 24e89092768da9bf66235d7be7fb4f7d 196 SUPERFAMILY SSF47240 4 152 3.87E-41 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_2330 2142f780fceb79bbf51d60da855f7b86 347 Gene3D G3DSA:3.40.50.1980 162 336 1.6E-33 T 11-10-2018 Clos_2330 2142f780fceb79bbf51d60da855f7b86 347 SUPERFAMILY SSF53807 49 335 8.24E-52 T 11-10-2018 Clos_2330 2142f780fceb79bbf51d60da855f7b86 347 Pfam PF01497 Periplasmic binding protein 72 311 2.1E-36 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_2330 2142f780fceb79bbf51d60da855f7b86 347 Gene3D G3DSA:3.40.50.1980 48 161 4.4E-17 T 11-10-2018 Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 Pfam PF01726 LexA DNA binding domain 3 66 6.2E-25 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 Pfam PF00717 Peptidase S24-like 126 189 2.7E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 SUPERFAMILY SSF46785 4 71 2.63E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 TIGRFAM TIGR00498 lexA: repressor LexA 3 206 1.2E-75 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 SUPERFAMILY SSF51306 85 204 2.62E-37 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 Hamap MF_00015 LexA repressor [lexA]. 4 206 33.943 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 Gene3D G3DSA:2.10.109.10 91 206 5.2E-43 T 11-10-2018 Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 133 144 1.3E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 132 1.3E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 173 1.3E-9 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Clos_1549 a7fd9a5b432b2e3eabac40cc397cf756 206 Gene3D G3DSA:1.10.10.10 4 69 2.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 Gene3D G3DSA:3.40.50.620 3 373 9.4E-144 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 SUPERFAMILY SSF57770 137 170 1.02E-7 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 SUPERFAMILY SSF47323 379 526 1.83E-32 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 Gene3D G3DSA:2.20.28.20 137 170 9.4E-144 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 SUPERFAMILY SSF52374 4 377 1.56E-95 T 11-10-2018 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 Gene3D G3DSA:1.10.730.10 374 531 1.5E-35 T 11-10-2018 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 Pfam PF09334 tRNA synthetases class I (M) 4 390 5.1E-142 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 PRINTS PR01041 Methionyl-tRNA synthetase signature 5 18 1.1E-20 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 PRINTS PR01041 Methionyl-tRNA synthetase signature 37 51 1.1E-20 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 PRINTS PR01041 Methionyl-tRNA synthetase signature 285 300 1.1E-20 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 PRINTS PR01041 Methionyl-tRNA synthetase signature 85 96 1.1E-20 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 PRINTS PR01041 Methionyl-tRNA synthetase signature 378 389 1.1E-20 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 PRINTS PR01041 Methionyl-tRNA synthetase signature 248 259 1.1E-20 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 Hamap MF_00098 Methionine--tRNA ligase [metG]. 1 537 37.846 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_1003 04868bfbc4ab637bf9ae87344f28e471 540 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 527 3.0E-160 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2200 142184fa30159a8f06d5c8454d1cabe0 411 Pfam PF04282 Family of unknown function (DUF438) 15 80 5.2E-29 T 11-10-2018 IPR007380 Domain of unknown function DUF438 Clos_2200 142184fa30159a8f06d5c8454d1cabe0 411 Pfam PF13596 PAS domain 291 396 1.8E-27 T 11-10-2018 Clos_2200 142184fa30159a8f06d5c8454d1cabe0 411 SUPERFAMILY SSF55785 290 388 1.03E-7 T 11-10-2018 IPR035965 PAS domain superfamily Clos_2200 142184fa30159a8f06d5c8454d1cabe0 411 Pfam PF01814 Hemerythrin HHE cation binding domain 94 223 1.1E-21 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Clos_2200 142184fa30159a8f06d5c8454d1cabe0 411 Gene3D G3DSA:1.20.120.520 87 305 4.6E-61 T 11-10-2018 Clos_0549 583a3b8937e8f8c952a6177e96791cc2 739 Pfam PF00580 UvrD/REP helicase N-terminal domain 22 286 2.5E-85 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Clos_0549 583a3b8937e8f8c952a6177e96791cc2 739 SUPERFAMILY SSF52540 17 652 3.3E-187 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0549 583a3b8937e8f8c952a6177e96791cc2 739 Gene3D G3DSA:3.40.50.300 22 287 1.3E-106 T 11-10-2018 Clos_0549 583a3b8937e8f8c952a6177e96791cc2 739 Pfam PF13361 UvrD-like helicase C-terminal domain 291 625 1.0E-77 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Clos_0549 583a3b8937e8f8c952a6177e96791cc2 739 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 20 735 3.4E-294 T 11-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 Clos_0549 583a3b8937e8f8c952a6177e96791cc2 739 Gene3D G3DSA:3.40.50.300 294 643 2.6E-126 T 11-10-2018 Clos_0549 583a3b8937e8f8c952a6177e96791cc2 739 Gene3D G3DSA:1.10.10.160 126 201 1.3E-106 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Clos_0549 583a3b8937e8f8c952a6177e96791cc2 739 Pfam PF12073 Protein of unknown function (DUF3553) 695 737 1.2E-6 T 11-10-2018 IPR021938 Protein of unknown function DUF3553 Clos_0549 583a3b8937e8f8c952a6177e96791cc2 739 Gene3D G3DSA:1.10.486.10 397 559 2.6E-126 T 11-10-2018 Clos_1598 16d587d46b0d7c49ef3ea04a417878ef 232 Pfam PF00535 Glycosyl transferase family 2 6 131 1.6E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Clos_1598 16d587d46b0d7c49ef3ea04a417878ef 232 SUPERFAMILY SSF53448 4 222 3.94E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_1598 16d587d46b0d7c49ef3ea04a417878ef 232 Gene3D G3DSA:3.90.550.10 2 231 1.3E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_1466 78b253c9cdcf986bf3e39735a3b7f2a6 167 Pfam PF01782 RimM N-terminal domain 7 86 1.1E-17 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 Clos_1466 78b253c9cdcf986bf3e39735a3b7f2a6 167 Pfam PF05239 PRC-barrel domain 92 165 5.1E-12 T 11-10-2018 IPR027275 PRC-barrel domain Clos_1466 78b253c9cdcf986bf3e39735a3b7f2a6 167 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 164 1.3E-45 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Clos_1466 78b253c9cdcf986bf3e39735a3b7f2a6 167 SUPERFAMILY SSF50346 95 165 5.49E-19 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Clos_1466 78b253c9cdcf986bf3e39735a3b7f2a6 167 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 165 24.06 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Clos_1466 78b253c9cdcf986bf3e39735a3b7f2a6 167 SUPERFAMILY SSF50447 4 86 1.59E-17 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_1466 78b253c9cdcf986bf3e39735a3b7f2a6 167 Gene3D G3DSA:2.40.30.60 4 87 4.5E-16 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Clos_1466 78b253c9cdcf986bf3e39735a3b7f2a6 167 Gene3D G3DSA:2.30.30.240 90 167 1.3E-17 T 11-10-2018 Clos_1949 c89754e85213d523092099457a8a8cd2 737 Gene3D G3DSA:3.20.20.450 484 736 7.4E-98 T 11-10-2018 IPR035919 EAL domain superfamily Clos_1949 c89754e85213d523092099457a8a8cd2 737 SUPERFAMILY SSF55073 316 473 3.22E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_1949 c89754e85213d523092099457a8a8cd2 737 SMART SM00267 299 471 3.8E-62 T 11-10-2018 IPR000160 GGDEF domain Clos_1949 c89754e85213d523092099457a8a8cd2 737 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 6.2E-55 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_1949 c89754e85213d523092099457a8a8cd2 737 Gene3D G3DSA:3.40.190.10 111 204 3.1E-59 T 11-10-2018 Clos_1949 c89754e85213d523092099457a8a8cd2 737 SMART SM00062 26 246 5.7E-55 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_1949 c89754e85213d523092099457a8a8cd2 737 Pfam PF00990 Diguanylate cyclase, GGDEF domain 310 467 7.3E-47 T 11-10-2018 IPR000160 GGDEF domain Clos_1949 c89754e85213d523092099457a8a8cd2 737 Gene3D G3DSA:3.30.70.270 304 483 4.3E-55 T 11-10-2018 Clos_1949 c89754e85213d523092099457a8a8cd2 737 SMART SM00052 481 727 5.3E-106 T 11-10-2018 IPR001633 EAL domain Clos_1949 c89754e85213d523092099457a8a8cd2 737 SUPERFAMILY SSF53850 23 247 8.76E-58 T 11-10-2018 Clos_1949 c89754e85213d523092099457a8a8cd2 737 Gene3D G3DSA:3.40.190.10 29 242 3.1E-59 T 11-10-2018 Clos_1949 c89754e85213d523092099457a8a8cd2 737 SUPERFAMILY SSF141868 487 735 1.27E-90 T 11-10-2018 IPR035919 EAL domain superfamily Clos_1949 c89754e85213d523092099457a8a8cd2 737 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 470 2.1E-38 T 11-10-2018 IPR000160 GGDEF domain Clos_1949 c89754e85213d523092099457a8a8cd2 737 Pfam PF00563 EAL domain 487 722 2.6E-75 T 11-10-2018 IPR001633 EAL domain Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 SUPERFAMILY SSF46689 391 444 6.72E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 Gene3D G3DSA:1.10.8.60 316 391 9.2E-18 T 11-10-2018 Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 Pfam PF13188 PAS domain 11 54 4.0E-4 T 11-10-2018 IPR000014 PAS domain Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 Gene3D G3DSA:3.30.450.20 9 110 7.9E-13 T 11-10-2018 Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 Pfam PF00158 Sigma-54 interaction domain 143 311 4.2E-63 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 68 1.1E-6 T 11-10-2018 IPR000014 PAS domain Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 Gene3D G3DSA:1.10.10.60 392 445 2.6E-9 T 11-10-2018 Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 SMART SM00091 7 73 8.7E-6 T 11-10-2018 IPR000014 PAS domain Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 SMART SM00382 163 307 4.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 SUPERFAMILY SSF52540 143 386 2.1E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 SUPERFAMILY SSF55785 12 92 3.14E-10 T 11-10-2018 IPR035965 PAS domain superfamily Clos_1806 636a95e65d07b093cb7ddc610a7cccb7 446 Gene3D G3DSA:3.40.50.300 129 315 9.9E-62 T 11-10-2018 Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 466 616 4.7E-27 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 Pfam PF02743 Cache domain 38 266 1.9E-22 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 SMART SM00304 305 360 1.5E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 Gene3D G3DSA:3.30.450.20 62 173 2.1E-35 T 11-10-2018 Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 Gene3D G3DSA:1.20.1480.50 276 367 2.3E-11 T 11-10-2018 Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 SUPERFAMILY SSF58104 334 663 1.09E-49 T 11-10-2018 Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 SMART SM00283 389 665 4.0E-17 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 SUPERFAMILY SSF103190 55 184 9.42E-12 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 Gene3D G3DSA:1.10.287.950 416 666 2.1E-34 T 11-10-2018 Clos_2609 6347208e8f6efe6e38e467c5acf7e43c 666 Gene3D G3DSA:3.30.450.20 50 270 2.1E-35 T 11-10-2018 Clos_1039 e5838278b53925796c26a32562ddb580 1085 SMART SM00490 946 1028 4.0E-26 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1039 e5838278b53925796c26a32562ddb580 1085 SUPERFAMILY SSF52540 593 834 5.32E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1039 e5838278b53925796c26a32562ddb580 1085 Gene3D G3DSA:1.20.120.850 856 1078 6.9E-91 T 11-10-2018 Clos_1039 e5838278b53925796c26a32562ddb580 1085 Pfam PF00271 Helicase conserved C-terminal domain 917 1028 6.8E-21 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1039 e5838278b53925796c26a32562ddb580 1085 Pfam PF00176 SNF2 family N-terminal domain 637 906 5.3E-57 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Clos_1039 e5838278b53925796c26a32562ddb580 1085 SUPERFAMILY SSF52540 836 1084 5.0E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1039 e5838278b53925796c26a32562ddb580 1085 Gene3D G3DSA:3.40.50.300 841 1042 6.9E-91 T 11-10-2018 Clos_1039 e5838278b53925796c26a32562ddb580 1085 Gene3D G3DSA:3.40.50.10810 623 835 6.5E-66 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Clos_1039 e5838278b53925796c26a32562ddb580 1085 Pfam PF08455 Bacterial SNF2 helicase associated 230 615 3.9E-104 T 11-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial Clos_1039 e5838278b53925796c26a32562ddb580 1085 SMART SM00487 618 805 2.8E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clos_1030 98c76f7ad5d9f6c0b8e656025f57b790 296 Gene3D G3DSA:3.40.190.290 92 293 9.1E-28 T 11-10-2018 Clos_1030 98c76f7ad5d9f6c0b8e656025f57b790 296 SUPERFAMILY SSF46785 1 87 1.13E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1030 98c76f7ad5d9f6c0b8e656025f57b790 296 SUPERFAMILY SSF53850 91 293 3.26E-29 T 11-10-2018 Clos_1030 98c76f7ad5d9f6c0b8e656025f57b790 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.2E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1030 98c76f7ad5d9f6c0b8e656025f57b790 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.2E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1030 98c76f7ad5d9f6c0b8e656025f57b790 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.2E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1030 98c76f7ad5d9f6c0b8e656025f57b790 296 Pfam PF03466 LysR substrate binding domain 91 291 3.2E-29 T 11-10-2018 IPR005119 LysR, substrate-binding Clos_1030 98c76f7ad5d9f6c0b8e656025f57b790 296 Gene3D G3DSA:1.10.10.10 1 91 9.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1030 98c76f7ad5d9f6c0b8e656025f57b790 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.5E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1517 c31e2426a765250fb942afdf6da68113 251 SUPERFAMILY SSF64005 19 245 4.58E-92 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Clos_1517 c31e2426a765250fb942afdf6da68113 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 195 212 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Clos_1517 c31e2426a765250fb942afdf6da68113 251 Gene3D G3DSA:3.40.1180.10 5 251 5.5E-100 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Clos_1517 c31e2426a765250fb942afdf6da68113 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 22 250 41.221 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Clos_1517 c31e2426a765250fb942afdf6da68113 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 22 249 1.9E-91 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Clos_1517 c31e2426a765250fb942afdf6da68113 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 29 249 1.6E-84 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 SMART SM00926 687 741 9.5E-8 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Gene3D G3DSA:3.10.20.740 4 118 6.3E-33 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 SUPERFAMILY SSF51905 420 497 4.14E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Gene3D G3DSA:3.40.50.740 1036 1139 7.2E-20 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 SUPERFAMILY SSF54862 564 674 5.2E-25 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Gene3D G3DSA:3.40.228.10 817 996 8.7E-43 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Gene3D G3DSA:2.20.25.90 687 740 2.5E-13 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 689 737 2.8E-8 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 SUPERFAMILY SSF53706 687 1128 5.89E-90 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 78 5.5E-16 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Pfam PF00384 Molybdopterin oxidoreductase 744 1100 1.7E-39 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 100 179 1.4E-16 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Gene3D G3DSA:3.50.50.60 182 288 8.4E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 PRINTS PR00419 Adrenodoxin reductase family signature 260 270 3.4E-16 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 PRINTS PR00419 Adrenodoxin reductase family signature 195 217 3.4E-16 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 PRINTS PR00419 Adrenodoxin reductase family signature 218 231 3.4E-16 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 PRINTS PR00419 Adrenodoxin reductase family signature 326 340 3.4E-16 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Gene3D G3DSA:3.50.50.60 292 435 2.2E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 SUPERFAMILY SSF51971 192 436 4.24E-68 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Pfam PF00037 4Fe-4S binding domain 655 673 7.9E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 195 489 1.0E-34 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Gene3D G3DSA:3.40.50.740 749 1008 8.7E-43 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 SUPERFAMILY SSF54292 4 101 3.74E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 Gene3D G3DSA:3.30.70.20 595 676 3.7E-25 T 11-10-2018 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 SUPERFAMILY SSF46548 97 203 3.19E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Clos_0277 4a2e721b498bee287cb04f5c73c778ad 1192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 658 669 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2870 731da588511fcb05fd76670f3ab1af88 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 217 2.5E-55 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Clos_2870 731da588511fcb05fd76670f3ab1af88 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 215 28.177 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Clos_2870 731da588511fcb05fd76670f3ab1af88 239 SUPERFAMILY SSF53335 5 238 3.41E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2870 731da588511fcb05fd76670f3ab1af88 239 Gene3D G3DSA:3.40.50.150 1 239 3.6E-88 T 11-10-2018 Clos_2870 731da588511fcb05fd76670f3ab1af88 239 Pfam PF02527 rRNA small subunit methyltransferase G 22 198 3.9E-52 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Clos_2870 731da588511fcb05fd76670f3ab1af88 239 PIRSF PIRSF003078 2 221 2.5E-55 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Clos_1697 1a4258f80558585ebabbbe6b42d9ff23 473 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 59 365 3.1E-56 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Clos_1697 1a4258f80558585ebabbbe6b42d9ff23 473 SUPERFAMILY SSF53686 35 367 1.96E-55 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clos_1697 1a4258f80558585ebabbbe6b42d9ff23 473 Gene3D G3DSA:3.40.50.1100 65 203 1.1E-19 T 11-10-2018 Clos_1697 1a4258f80558585ebabbbe6b42d9ff23 473 Gene3D G3DSA:3.40.50.1100 204 371 1.9E-20 T 11-10-2018 Clos_1732 c444b3327aed3bb84272f8a99f7ecc5c 297 SMART SM00909 78 166 7.7E-17 T 11-10-2018 IPR019606 GerMN domain Clos_1732 c444b3327aed3bb84272f8a99f7ecc5c 297 Pfam PF10646 Sporulation and spore germination 52 161 2.6E-21 T 11-10-2018 IPR019606 GerMN domain Clos_0233 896f8e331090f06262fd6b98ffa26aee 573 SMART SM00382 358 544 1.9E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0233 896f8e331090f06262fd6b98ffa26aee 573 Pfam PF00005 ABC transporter 349 498 2.7E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0233 896f8e331090f06262fd6b98ffa26aee 573 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0233 896f8e331090f06262fd6b98ffa26aee 573 SUPERFAMILY SSF90123 3 319 1.57E-78 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0233 896f8e331090f06262fd6b98ffa26aee 573 Gene3D G3DSA:3.40.50.300 329 571 4.7E-95 T 11-10-2018 Clos_0233 896f8e331090f06262fd6b98ffa26aee 573 SUPERFAMILY SSF52540 322 569 1.59E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0233 896f8e331090f06262fd6b98ffa26aee 573 Pfam PF00664 ABC transporter transmembrane region 20 286 1.6E-50 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_0233 896f8e331090f06262fd6b98ffa26aee 573 Gene3D G3DSA:1.20.1560.10 1 315 1.7E-82 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_2594 8da25f4d6cd199c1d94bdd7ccdeed028 284 Gene3D G3DSA:3.40.190.10 60 281 7.8E-72 T 11-10-2018 Clos_2594 8da25f4d6cd199c1d94bdd7ccdeed028 284 SMART SM00062 58 284 3.3E-68 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_2594 8da25f4d6cd199c1d94bdd7ccdeed028 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 59 282 1.2E-64 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_2594 8da25f4d6cd199c1d94bdd7ccdeed028 284 SUPERFAMILY SSF53850 21 283 1.25E-67 T 11-10-2018 Clos_2594 8da25f4d6cd199c1d94bdd7ccdeed028 284 Gene3D G3DSA:3.40.190.10 144 240 7.8E-72 T 11-10-2018 Clos_0414 0f8f1b5609c38855088b3169e4982e5c 180 Pfam PF03358 NADPH-dependent FMN reductase 1 145 1.4E-34 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Clos_0414 0f8f1b5609c38855088b3169e4982e5c 180 SUPERFAMILY SSF52218 1 173 2.3E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_0414 0f8f1b5609c38855088b3169e4982e5c 180 Gene3D G3DSA:3.40.50.360 1 180 6.3E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_1413 f770460a098a2922a730ee0a5b868063 262 Gene3D G3DSA:3.20.20.70 1 262 1.6E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1413 f770460a098a2922a730ee0a5b868063 262 Pfam PF00793 DAHP synthetase I family 21 259 1.3E-80 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Clos_1413 f770460a098a2922a730ee0a5b868063 262 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 6 261 7.0E-125 T 11-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Clos_1413 f770460a098a2922a730ee0a5b868063 262 SUPERFAMILY SSF51569 6 260 3.66E-103 T 11-10-2018 Clos_1267 088f0ef6f9e7f9b66cdf6f3644c8b760 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1267 088f0ef6f9e7f9b66cdf6f3644c8b760 233 SMART SM00382 32 215 3.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1267 088f0ef6f9e7f9b66cdf6f3644c8b760 233 Gene3D G3DSA:3.40.50.300 2 230 4.4E-65 T 11-10-2018 Clos_1267 088f0ef6f9e7f9b66cdf6f3644c8b760 233 SUPERFAMILY SSF52540 4 220 1.61E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1267 088f0ef6f9e7f9b66cdf6f3644c8b760 233 Pfam PF00005 ABC transporter 24 166 2.6E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2504 df529fe1301edd479bddf83c2b5265bc 282 Pfam PF08668 HDOD domain 15 211 1.3E-65 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Clos_2504 df529fe1301edd479bddf83c2b5265bc 282 Gene3D G3DSA:1.10.3210.10 1 275 1.1E-82 T 11-10-2018 Clos_2504 df529fe1301edd479bddf83c2b5265bc 282 TIGRFAM TIGR00277 HDIG: HDIG domain 111 209 7.4E-9 T 11-10-2018 IPR006675 HDIG domain Clos_2504 df529fe1301edd479bddf83c2b5265bc 282 SUPERFAMILY SSF109604 4 271 1.07E-77 T 11-10-2018 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 SUPERFAMILY SSF52374 6 328 2.33E-95 T 11-10-2018 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 Pfam PF00579 tRNA synthetases class I (W and Y) 5 284 1.2E-76 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 17 33 4.0E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 143 164 4.0E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 196 206 4.0E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 4.0E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 Gene3D G3DSA:3.40.50.620 7 327 6.8E-134 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 Gene3D G3DSA:1.10.240.10 187 296 6.8E-134 T 11-10-2018 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 4 329 40.439 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Clos_2123 e9eaee03895b4404dfec6729e9f1f7d3 331 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 328 3.0E-108 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Clos_0285 49f3b1c02303e598798fb8e0bc6b56dc 292 PIRSF PIRSF010376 2 290 3.5E-90 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Clos_0285 49f3b1c02303e598798fb8e0bc6b56dc 292 Gene3D G3DSA:3.30.70.890 165 289 2.4E-30 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Clos_0285 49f3b1c02303e598798fb8e0bc6b56dc 292 SUPERFAMILY SSF54211 4 159 1.44E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_0285 49f3b1c02303e598798fb8e0bc6b56dc 292 SUPERFAMILY SSF55060 164 282 6.72E-28 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Clos_0285 49f3b1c02303e598798fb8e0bc6b56dc 292 Gene3D G3DSA:3.30.230.10 1 160 1.5E-57 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_0285 49f3b1c02303e598798fb8e0bc6b56dc 292 Pfam PF08544 GHMP kinases C terminal 200 276 5.7E-12 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain Clos_0285 49f3b1c02303e598798fb8e0bc6b56dc 292 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 284 8.9E-87 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Clos_0285 49f3b1c02303e598798fb8e0bc6b56dc 292 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 282 34.235 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Clos_0285 49f3b1c02303e598798fb8e0bc6b56dc 292 Pfam PF00288 GHMP kinases N terminal domain 87 145 1.3E-11 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 Pfam PF05193 Peptidase M16 inactive domain 208 390 1.5E-15 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 SUPERFAMILY SSF63411 8 244 2.44E-48 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 Gene3D G3DSA:3.30.830.10 1 256 1.4E-88 T 11-10-2018 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 Gene3D G3DSA:3.30.830.10 497 947 4.3E-148 T 11-10-2018 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 SUPERFAMILY SSF63411 263 522 2.12E-58 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 Gene3D G3DSA:3.30.830.10 532 781 4.3E-148 T 11-10-2018 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 Pfam PF08367 Peptidase M16C associated 465 715 6.1E-77 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 SMART SM01264 465 715 1.2E-97 T 11-10-2018 IPR013578 Peptidase M16C associated GO:0006508 Reactome: R-HSA-1268020 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 Gene3D G3DSA:3.30.830.10 257 488 8.3E-65 T 11-10-2018 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 SUPERFAMILY SSF63411 786 975 8.8E-35 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 SUPERFAMILY SSF63411 524 779 1.07E-67 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_1941 1bca7ba12057d0244567bd3fb1179318 976 Pfam PF00675 Insulinase (Peptidase family M16) 60 136 3.4E-6 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Clos_1677 b7a742cfcb4ad77debcab0d2dbcd1797 232 Gene3D G3DSA:2.10.109.10 127 228 1.7E-8 T 11-10-2018 Clos_1677 b7a742cfcb4ad77debcab0d2dbcd1797 232 SUPERFAMILY SSF51306 134 225 1.26E-13 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Clos_1677 b7a742cfcb4ad77debcab0d2dbcd1797 232 SMART SM00530 7 62 4.5E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1677 b7a742cfcb4ad77debcab0d2dbcd1797 232 SUPERFAMILY SSF47413 3 63 8.04E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1677 b7a742cfcb4ad77debcab0d2dbcd1797 232 Gene3D G3DSA:1.10.260.40 1 106 2.7E-14 T 11-10-2018 Clos_1677 b7a742cfcb4ad77debcab0d2dbcd1797 232 Pfam PF01381 Helix-turn-helix 8 60 1.7E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1677 b7a742cfcb4ad77debcab0d2dbcd1797 232 Pfam PF00717 Peptidase S24-like 149 209 2.0E-4 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Clos_1275 3b0ba49571c3182dead18b9c7070daf1 353 SUPERFAMILY SSF51905 1 315 1.8E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1275 3b0ba49571c3182dead18b9c7070daf1 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 268 283 4.1E-14 T 11-10-2018 Clos_1275 3b0ba49571c3182dead18b9c7070daf1 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 4.1E-14 T 11-10-2018 Clos_1275 3b0ba49571c3182dead18b9c7070daf1 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 4.1E-14 T 11-10-2018 Clos_1275 3b0ba49571c3182dead18b9c7070daf1 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 299 4.1E-14 T 11-10-2018 Clos_1275 3b0ba49571c3182dead18b9c7070daf1 353 Gene3D G3DSA:3.50.50.60 1 352 1.1E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1744 6ac22c91f71169ed5cedf7646c47dfd0 215 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 8 115 1.0E-30 T 11-10-2018 IPR013559 YheO-like Clos_1744 6ac22c91f71169ed5cedf7646c47dfd0 215 Pfam PF08348 YheO-like PAS domain 9 120 3.7E-40 T 11-10-2018 IPR013559 YheO-like Clos_1744 6ac22c91f71169ed5cedf7646c47dfd0 215 Pfam PF13309 HTH domain 148 209 5.6E-25 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Clos_2444 8715296b2e3774d5e16462ad2edac17e 390 SUPERFAMILY SSF53901 4 266 5.14E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_2444 8715296b2e3774d5e16462ad2edac17e 390 Gene3D G3DSA:3.40.47.10 125 386 1.7E-147 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_2444 8715296b2e3774d5e16462ad2edac17e 390 Pfam PF00108 Thiolase, N-terminal domain 5 260 1.7E-74 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Clos_2444 8715296b2e3774d5e16462ad2edac17e 390 PIRSF PIRSF000429 1 390 1.2E-128 T 11-10-2018 IPR002155 Thiolase GO:0016747 Clos_2444 8715296b2e3774d5e16462ad2edac17e 390 Gene3D G3DSA:3.40.47.10 6 273 1.7E-147 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_2444 8715296b2e3774d5e16462ad2edac17e 390 SUPERFAMILY SSF53901 269 389 1.85E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_2444 8715296b2e3774d5e16462ad2edac17e 390 Pfam PF02803 Thiolase, C-terminal domain 268 389 1.6E-45 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Clos_2444 8715296b2e3774d5e16462ad2edac17e 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 1.5E-137 T 11-10-2018 IPR002155 Thiolase GO:0016747 Clos_2444 8715296b2e3774d5e16462ad2edac17e 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Gene3D G3DSA:2.40.270.10 997 1062 5.5E-28 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Pfam PF04565 RNA polymerase Rpb2, domain 3 490 558 1.7E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 SUPERFAMILY SSF64484 13 1171 0.0 T 11-10-2018 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Gene3D G3DSA:2.40.50.150 806 945 9.9E-63 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Gene3D G3DSA:3.90.1110.10 142 304 9.7E-61 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 213 911 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Gene3D G3DSA:3.90.1800.10 1072 1128 2.1E-10 T 11-10-2018 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Pfam PF00562 RNA polymerase Rpb2, domain 6 697 1084 2.2E-171 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 283 1.4E-24 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Gene3D G3DSA:2.40.270.10 767 805 2.3E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Pfam PF10385 RNA polymerase beta subunit external 1 domain 568 636 5.7E-25 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Pfam PF04563 RNA polymerase beta subunit 28 476 2.7E-26 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Gene3D G3DSA:3.90.1100.10 413 618 2.8E-74 T 11-10-2018 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Gene3D G3DSA:3.90.1100.10 624 693 1.4E-19 T 11-10-2018 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1162 12.59 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Gene3D G3DSA:2.40.50.100 694 766 7.3E-31 T 11-10-2018 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 ProSitePatterns PS01166 RNA polymerases beta chain signature. 937 949 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0484 a84fc10ff61fa4ec9e74dfd5b34e9b9b 1241 Pfam PF04560 RNA polymerase Rpb2, domain 7 1086 1161 1.5E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0886 07846b6652a300f5e6deac0b7c1bc2cb 541 Gene3D G3DSA:3.40.50.970 346 540 5.7E-41 T 11-10-2018 Clos_0886 07846b6652a300f5e6deac0b7c1bc2cb 541 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 324 7.3E-26 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Clos_0886 07846b6652a300f5e6deac0b7c1bc2cb 541 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 7.3E-24 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Clos_0886 07846b6652a300f5e6deac0b7c1bc2cb 541 SUPERFAMILY SSF52518 1 170 1.72E-35 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_0886 07846b6652a300f5e6deac0b7c1bc2cb 541 SUPERFAMILY SSF52518 351 532 5.31E-40 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_0886 07846b6652a300f5e6deac0b7c1bc2cb 541 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 166 9.5E-36 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Clos_0886 07846b6652a300f5e6deac0b7c1bc2cb 541 Gene3D G3DSA:3.40.50.970 1 173 1.3E-40 T 11-10-2018 Clos_0886 07846b6652a300f5e6deac0b7c1bc2cb 541 Gene3D G3DSA:3.40.50.1220 179 345 2.9E-33 T 11-10-2018 Clos_0886 07846b6652a300f5e6deac0b7c1bc2cb 541 SUPERFAMILY SSF52467 152 331 4.15E-35 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clos_1974 aadc5419e1403483c966537b388a0754 214 Gene3D G3DSA:3.30.70.1450 137 214 7.7E-27 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Clos_1974 aadc5419e1403483c966537b388a0754 214 SUPERFAMILY SSF51735 2 133 4.68E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1974 aadc5419e1403483c966537b388a0754 214 Pfam PF02080 TrkA-C domain 148 213 1.5E-12 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Clos_1974 aadc5419e1403483c966537b388a0754 214 Pfam PF02254 TrkA-N domain 4 119 6.3E-31 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Clos_1974 aadc5419e1403483c966537b388a0754 214 SUPERFAMILY SSF116726 130 213 2.09E-20 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Clos_1974 aadc5419e1403483c966537b388a0754 214 Gene3D G3DSA:3.40.50.720 1 136 1.6E-39 T 11-10-2018 Clos_1369 2d6644280992bd0e7a673a6aed0af77a 52 SUPERFAMILY SSF140500 2 46 6.54E-6 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 Clos_1369 2d6644280992bd0e7a673a6aed0af77a 52 Pfam PF09388 Spo0E like sporulation regulatory protein 2 42 8.2E-9 T 11-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 Gene3D G3DSA:3.40.50.300 150 332 4.7E-71 T 11-10-2018 Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 200 331 1.3E-43 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 SUPERFAMILY SSF52540 156 403 3.38E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 ProSitePatterns PS00674 AAA-protein family signature. 303 321 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 113 602 1.3E-234 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 SUPERFAMILY SSF140990 414 609 1.44E-72 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 SMART SM00382 196 335 2.2E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 612 37.707 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 Gene3D G3DSA:1.20.58.760 414 621 2.0E-75 T 11-10-2018 Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 Pfam PF01434 Peptidase family M41 394 599 2.7E-80 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Clos_0432 aafe0e31272c7e6b098c9220fde3cd09 651 Gene3D G3DSA:1.10.8.60 334 411 3.3E-28 T 11-10-2018 Clos_0907 b36a8e60d375028fe68cd9ae96f14d7d 375 SUPERFAMILY SSF54862 185 259 7.11E-12 T 11-10-2018 Clos_0907 b36a8e60d375028fe68cd9ae96f14d7d 375 SUPERFAMILY SSF48371 295 371 4.22E-8 T 11-10-2018 IPR016024 Armadillo-type fold Clos_0907 b36a8e60d375028fe68cd9ae96f14d7d 375 Gene3D G3DSA:3.30.70.20 179 262 1.7E-6 T 11-10-2018 Clos_0907 b36a8e60d375028fe68cd9ae96f14d7d 375 Pfam PF08331 Domain of unknown function (DUF1730) 54 132 2.5E-20 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 Clos_0907 b36a8e60d375028fe68cd9ae96f14d7d 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 186 197 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0907 b36a8e60d375028fe68cd9ae96f14d7d 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 7 329 8.8E-97 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Clos_0907 b36a8e60d375028fe68cd9ae96f14d7d 375 Pfam PF13484 4Fe-4S double cluster binding domain 185 248 1.9E-15 T 11-10-2018 Clos_0907 b36a8e60d375028fe68cd9ae96f14d7d 375 Pfam PF13646 HEAT repeats 298 360 1.4E-6 T 11-10-2018 Clos_0907 b36a8e60d375028fe68cd9ae96f14d7d 375 Gene3D G3DSA:1.25.10.10 292 374 5.3E-7 T 11-10-2018 IPR011989 Armadillo-like helical Clos_2190 6579bd94cd7f8b607d04cad0c1fecb25 193 SUPERFAMILY SSF53271 6 151 6.82E-41 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_2190 6579bd94cd7f8b607d04cad0c1fecb25 193 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 7 190 4.2E-62 T 11-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Clos_2190 6579bd94cd7f8b607d04cad0c1fecb25 193 Pfam PF00156 Phosphoribosyl transferase domain 38 152 3.2E-21 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Clos_2190 6579bd94cd7f8b607d04cad0c1fecb25 193 Gene3D G3DSA:3.40.50.2020 6 193 1.6E-62 T 11-10-2018 Clos_2190 6579bd94cd7f8b607d04cad0c1fecb25 193 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 193 26.58 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_1014 88806b44f742bdc894efd95f48dd487c 262 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 198 5.6E-71 T 11-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 Clos_1014 88806b44f742bdc894efd95f48dd487c 262 Pfam PF00005 ABC transporter 20 166 1.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1014 88806b44f742bdc894efd95f48dd487c 262 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1014 88806b44f742bdc894efd95f48dd487c 262 SUPERFAMILY SSF52540 1 224 3.31E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1014 88806b44f742bdc894efd95f48dd487c 262 Gene3D G3DSA:3.40.50.300 1 243 5.5E-67 T 11-10-2018 Clos_1014 88806b44f742bdc894efd95f48dd487c 262 SMART SM00382 27 213 5.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 221 244 3.9E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 508 521 3.9E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 548 557 3.9E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 382 397 3.9E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 42 53 3.9E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 SUPERFAMILY SSF52374 11 636 1.05E-138 T 11-10-2018 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 SUPERFAMILY SSF47323 644 879 9.72E-56 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 2 1021 13.753 T 11-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 Gene3D G3DSA:3.40.50.620 16 615 1.0E-249 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 Gene3D G3DSA:3.90.740.10 198 388 1.0E-249 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 622 1.2E-190 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 12 830 4.3E-295 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 Pfam PF08264 Anticodon-binding domain of tRNA 676 823 1.2E-34 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 SUPERFAMILY SSF50677 200 384 4.19E-48 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Clos_2197 fc0f7459ebf9a61669c9dc9901d5779d 1032 Gene3D G3DSA:1.10.730.10 630 814 5.7E-55 T 11-10-2018 Clos_0230 3d6d2c579fb6dbbc101a53d44646d716 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 1.3E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0230 3d6d2c579fb6dbbc101a53d44646d716 232 SMART SM00862 154 230 2.3E-29 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0230 3d6d2c579fb6dbbc101a53d44646d716 232 Gene3D G3DSA:3.40.50.2300 2 131 5.8E-42 T 11-10-2018 Clos_0230 3d6d2c579fb6dbbc101a53d44646d716 232 SMART SM00448 4 114 2.6E-46 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0230 3d6d2c579fb6dbbc101a53d44646d716 232 SUPERFAMILY SSF52172 3 188 9.21E-44 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0230 3d6d2c579fb6dbbc101a53d44646d716 232 Gene3D G3DSA:1.10.10.10 132 232 6.4E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0230 3d6d2c579fb6dbbc101a53d44646d716 232 Pfam PF00072 Response regulator receiver domain 6 115 1.7E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 Gene3D G3DSA:3.90.45.10 1 147 2.2E-54 T 11-10-2018 IPR036821 Peptide deformylase superfamily Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 PRINTS PR01576 Peptide deformylase signature 86 97 2.1E-34 T 11-10-2018 IPR023635 Peptide deformylase Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 PRINTS PR01576 Peptide deformylase signature 117 146 2.1E-34 T 11-10-2018 IPR023635 Peptide deformylase Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 PRINTS PR01576 Peptide deformylase signature 98 116 2.1E-34 T 11-10-2018 IPR023635 Peptide deformylase Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 PRINTS PR01576 Peptide deformylase signature 33 62 2.1E-34 T 11-10-2018 IPR023635 Peptide deformylase Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 Pfam PF01327 Polypeptide deformylase 4 146 1.1E-48 T 11-10-2018 IPR023635 Peptide deformylase Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 9 146 4.4E-47 T 11-10-2018 IPR023635 Peptide deformylase Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 SUPERFAMILY SSF56420 2 146 1.83E-55 T 11-10-2018 IPR036821 Peptide deformylase superfamily Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 PIRSF PIRSF004749 1 147 8.6E-50 T 11-10-2018 IPR023635 Peptide deformylase Clos_1427 90461f87bf8bfdc6d9e5fc14e7d1f7ab 147 Hamap MF_00163 Peptide deformylase [def]. 2 147 27.716 T 11-10-2018 IPR023635 Peptide deformylase Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Gene3D G3DSA:1.10.601.10 133 211 5.8E-52 T 11-10-2018 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Pfam PF00140 Sigma-70 factor, region 1.2 101 134 4.4E-19 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Pfam PF04542 Sigma-70 region 2 139 208 8.5E-23 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 SUPERFAMILY SSF88659 212 286 2.24E-23 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 372 34.891 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 SUPERFAMILY SSF88659 269 371 7.85E-31 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Pfam PF04539 Sigma-70 region 3 218 294 1.8E-31 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 135 360 6.7E-39 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Pfam PF03979 Sigma-70 factor, region 1.1 8 83 1.1E-19 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Gene3D G3DSA:1.20.120.1810 96 132 1.2E-11 T 11-10-2018 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Gene3D G3DSA:1.10.10.10 289 372 7.9E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 332 358 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Pfam PF04545 Sigma-70, region 4 307 360 1.6E-20 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 163 176 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Gene3D G3DSA:1.10.10.10 212 287 1.3E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 135 372 7.5E-124 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 Gene3D G3DSA:1.10.220.120 5 67 1.8E-15 T 11-10-2018 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 PRINTS PR00046 Major sigma-70 factor signature 187 195 5.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 PRINTS PR00046 Major sigma-70 factor signature 332 347 5.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 PRINTS PR00046 Major sigma-70 factor signature 163 176 5.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 PRINTS PR00046 Major sigma-70 factor signature 311 323 5.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 PRINTS PR00046 Major sigma-70 factor signature 347 358 5.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1279 866c62d1a7d99c2656edd89a1964b7f4 372 SUPERFAMILY SSF88946 100 209 3.66E-55 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 476 1.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 1.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 436 1.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 Pfam PF00512 His Kinase A (phospho-acceptor) domain 273 337 6.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 Gene3D G3DSA:1.10.287.130 266 339 1.1E-14 T 11-10-2018 Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 SUPERFAMILY SSF55781 117 265 6.54E-7 T 11-10-2018 Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 Gene3D G3DSA:3.30.565.10 343 502 8.0E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 SUPERFAMILY SSF55874 330 496 6.81E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 Pfam PF13493 Domain of unknown function (DUF4118) 12 115 2.5E-14 T 11-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 SUPERFAMILY SSF47384 264 341 1.79E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 SMART SM00388 272 340 2.6E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 496 6.8E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 SMART SM00387 384 498 7.4E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 Gene3D G3DSA:1.20.120.620 4 110 3.3E-9 T 11-10-2018 IPR038318 KdpD, transmembrane domain superfamily Clos_0610 28c0789c8ec0e23d16ee00e82ef8639e 503 Gene3D G3DSA:3.30.450.40 120 265 3.6E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_0317 c94f39f4deb1dad9dd4c68cf58b0a1f0 512 PIRSF PIRSF005690 25 512 1.4E-152 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Clos_0317 c94f39f4deb1dad9dd4c68cf58b0a1f0 512 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 36 510 1.6E-165 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Clos_0398 bc7b97d71825cdf20167ffb017ce374e 271 SMART SM00450 151 266 4.7E-14 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_0398 bc7b97d71825cdf20167ffb017ce374e 271 SMART SM00450 5 127 4.2E-10 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_0398 bc7b97d71825cdf20167ffb017ce374e 271 Gene3D G3DSA:3.40.250.10 154 271 2.4E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_0398 bc7b97d71825cdf20167ffb017ce374e 271 SUPERFAMILY SSF52821 146 268 3.93E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_0398 bc7b97d71825cdf20167ffb017ce374e 271 Gene3D G3DSA:3.40.250.10 1 146 6.2E-34 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_0398 bc7b97d71825cdf20167ffb017ce374e 271 Pfam PF00581 Rhodanese-like domain 6 123 6.6E-16 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_0398 bc7b97d71825cdf20167ffb017ce374e 271 Pfam PF00581 Rhodanese-like domain 154 261 4.7E-12 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_0398 bc7b97d71825cdf20167ffb017ce374e 271 SUPERFAMILY SSF52821 4 138 2.1E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 488 499 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 SUPERFAMILY SSF54862 566 628 4.19E-15 T 11-10-2018 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Gene3D G3DSA:1.20.1440.230 473 572 2.0E-37 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 SUPERFAMILY SSF140490 471 573 9.55E-41 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Pfam PF12838 4Fe-4S dicluster domain 582 627 2.1E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Gene3D G3DSA:3.40.30.10 39 134 8.0E-29 T 11-10-2018 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Pfam PF10531 SLBB domain 391 437 6.4E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 SUPERFAMILY SSF142019 146 386 1.57E-93 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 SUPERFAMILY SSF142984 387 470 3.79E-25 T 11-10-2018 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Gene3D G3DSA:3.10.20.600 378 472 1.6E-33 T 11-10-2018 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 37 116 4.2E-8 T 11-10-2018 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Gene3D G3DSA:3.30.70.20 576 631 4.8E-16 T 11-10-2018 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 SUPERFAMILY SSF52833 40 129 7.49E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 SMART SM00928 475 520 6.1E-27 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 476 560 1.9E-34 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Gene3D G3DSA:3.40.50.11540 199 377 2.9E-80 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 613 624 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2251 6df643ae60653c02bf9194876ca3c47a 631 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 194 365 8.9E-47 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 Pfam PF00035 Double-stranded RNA binding motif 168 233 1.0E-16 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 14 234 9.6E-82 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 Gene3D G3DSA:3.30.160.20 167 234 1.3E-22 T 11-10-2018 Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 Hamap MF_00104 Ribonuclease 3 [rnc]. 14 231 32.337 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 Pfam PF14622 Ribonuclease-III-like 26 153 2.1E-40 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 SUPERFAMILY SSF54768 163 236 4.71E-22 T 11-10-2018 Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 SMART SM00535 26 161 1.2E-51 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 SMART SM00358 168 235 1.6E-22 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 SUPERFAMILY SSF69065 5 157 9.94E-51 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 ProSitePatterns PS00517 Ribonuclease III family signature. 50 58 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Clos_1458 0b8e11e7e326717790631f8b6cd15dd7 241 Gene3D G3DSA:1.10.1520.10 10 159 7.9E-49 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Clos_0188 fa1a4109b96d17ceb6fff4adc190c16b 459 PRINTS PR00175 Sodium/alanine symporter signature 94 116 5.2E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0188 fa1a4109b96d17ceb6fff4adc190c16b 459 PRINTS PR00175 Sodium/alanine symporter signature 214 233 5.2E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0188 fa1a4109b96d17ceb6fff4adc190c16b 459 PRINTS PR00175 Sodium/alanine symporter signature 415 435 5.2E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0188 fa1a4109b96d17ceb6fff4adc190c16b 459 PRINTS PR00175 Sodium/alanine symporter signature 356 378 5.2E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0188 fa1a4109b96d17ceb6fff4adc190c16b 459 PRINTS PR00175 Sodium/alanine symporter signature 186 204 5.2E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0188 fa1a4109b96d17ceb6fff4adc190c16b 459 PRINTS PR00175 Sodium/alanine symporter signature 309 327 5.2E-47 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0188 fa1a4109b96d17ceb6fff4adc190c16b 459 Pfam PF01235 Sodium:alanine symporter family 55 453 4.1E-119 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0188 fa1a4109b96d17ceb6fff4adc190c16b 459 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 446 3.8E-126 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0188 fa1a4109b96d17ceb6fff4adc190c16b 459 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 94 109 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0385 577e2f41e1192f7c2ae8e5ac1c3eec51 489 Gene3D G3DSA:1.20.120.30 361 483 3.9E-5 T 11-10-2018 Clos_0385 577e2f41e1192f7c2ae8e5ac1c3eec51 489 Gene3D G3DSA:1.10.287.950 39 330 1.4E-46 T 11-10-2018 Clos_0385 577e2f41e1192f7c2ae8e5ac1c3eec51 489 SMART SM00283 84 341 1.1E-28 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0385 577e2f41e1192f7c2ae8e5ac1c3eec51 489 Pfam PF13682 Chemoreceptor zinc-binding domain 378 442 2.8E-8 T 11-10-2018 IPR025991 Chemoreceptor zinc-binding domain Clos_0385 577e2f41e1192f7c2ae8e5ac1c3eec51 489 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 155 309 6.7E-32 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0385 577e2f41e1192f7c2ae8e5ac1c3eec51 489 SUPERFAMILY SSF58104 90 351 1.7E-51 T 11-10-2018 Clos_0930 25631c19231e5920fa77816b8348eb03 578 Gene3D G3DSA:4.10.260.20 515 578 3.8E-19 T 11-10-2018 IPR036991 Iron hydrogenase, small subunit superfamily Clos_0930 25631c19231e5920fa77816b8348eb03 578 SMART SM00902 515 574 2.8E-23 T 11-10-2018 IPR003149 Iron hydrogenase, small subunit Clos_0930 25631c19231e5920fa77816b8348eb03 578 Gene3D G3DSA:3.40.50.1780 203 509 7.9E-159 T 11-10-2018 Clos_0930 25631c19231e5920fa77816b8348eb03 578 Gene3D G3DSA:3.10.20.740 1 121 6.0E-40 T 11-10-2018 Clos_0930 25631c19231e5920fa77816b8348eb03 578 Pfam PF02256 Iron hydrogenase small subunit 519 573 1.7E-22 T 11-10-2018 IPR003149 Iron hydrogenase, small subunit Clos_0930 25631c19231e5920fa77816b8348eb03 578 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 81 119 1.5E-14 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0930 25631c19231e5920fa77816b8348eb03 578 Pfam PF12838 4Fe-4S dicluster domain 143 201 3.9E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0930 25631c19231e5920fa77816b8348eb03 578 SUPERFAMILY SSF54292 1 72 3.6E-18 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Clos_0930 25631c19231e5920fa77816b8348eb03 578 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 136 509 3.5E-168 T 11-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 Clos_0930 25631c19231e5920fa77816b8348eb03 578 SUPERFAMILY SSF53920 187 571 2.35E-135 T 11-10-2018 IPR009016 Iron hydrogenase Clos_0930 25631c19231e5920fa77816b8348eb03 578 SMART SM00929 81 121 1.8E-14 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0930 25631c19231e5920fa77816b8348eb03 578 Gene3D G3DSA:3.30.70.20 139 202 7.9E-159 T 11-10-2018 Clos_0930 25631c19231e5920fa77816b8348eb03 578 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 74 2.1E-17 T 11-10-2018 Clos_0930 25631c19231e5920fa77816b8348eb03 578 SUPERFAMILY SSF54862 73 208 2.18E-34 T 11-10-2018 Clos_0930 25631c19231e5920fa77816b8348eb03 578 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 187 198 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0930 25631c19231e5920fa77816b8348eb03 578 Gene3D G3DSA:3.40.950.10 269 499 7.9E-159 T 11-10-2018 Clos_0930 25631c19231e5920fa77816b8348eb03 578 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 220 505 6.6E-100 T 11-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal Clos_0060 d962ac048682f2cae80895cef84a111f 210 SUPERFAMILY SSF52540 3 206 4.16E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0060 d962ac048682f2cae80895cef84a111f 210 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Clos_0060 d962ac048682f2cae80895cef84a111f 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 206 32.669 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Clos_0060 d962ac048682f2cae80895cef84a111f 210 Pfam PF02223 Thymidylate kinase 9 198 1.1E-60 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Clos_0060 d962ac048682f2cae80895cef84a111f 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 197 1.8E-63 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Clos_0060 d962ac048682f2cae80895cef84a111f 210 Gene3D G3DSA:3.40.50.300 1 208 2.7E-76 T 11-10-2018 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 SUPERFAMILY SSF53623 443 733 9.55E-45 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 Gene3D G3DSA:3.90.190.20 726 879 2.4E-22 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 Pfam PF02875 Mur ligase family, glutamate ligase domain 722 794 2.6E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 Pfam PF08443 RimK-like ATP-grasp domain 386 470 5.1E-5 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 Pfam PF08443 RimK-like ATP-grasp domain 213 318 1.9E-9 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 Gene3D G3DSA:3.30.470.20 364 472 4.7E-13 T 11-10-2018 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 864 0.0 T 11-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 Gene3D G3DSA:3.40.1190.10 473 715 2.9E-40 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 Pfam PF08245 Mur ligase middle domain 485 695 7.3E-27 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 SUPERFAMILY SSF53244 722 849 7.88E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 Gene3D G3DSA:3.30.470.20 205 330 3.9E-19 T 11-10-2018 Clos_2106 b049b72ca958d4b98aa350395da290dd 882 SUPERFAMILY SSF56059 214 478 1.67E-38 T 11-10-2018 Clos_1116 e5d55b45b2355725a6ccea4636266317 319 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 7 305 4.5E-91 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 Clos_1116 e5d55b45b2355725a6ccea4636266317 319 SUPERFAMILY SSF53850 45 319 6.67E-76 T 11-10-2018 Clos_1116 e5d55b45b2355725a6ccea4636266317 319 Gene3D G3DSA:3.40.190.10 48 304 9.0E-97 T 11-10-2018 Clos_1116 e5d55b45b2355725a6ccea4636266317 319 Pfam PF12849 PBP superfamily domain 43 291 1.2E-32 T 11-10-2018 IPR024370 PBP domain Clos_1116 e5d55b45b2355725a6ccea4636266317 319 Gene3D G3DSA:3.40.190.10 127 268 9.0E-97 T 11-10-2018 Clos_2384 5e085b07f87533263f864198c3cdccf4 712 SMART SM00283 421 710 7.2E-50 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2384 5e085b07f87533263f864198c3cdccf4 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 662 2.2E-30 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2384 5e085b07f87533263f864198c3cdccf4 712 Gene3D G3DSA:1.10.287.950 410 710 2.6E-59 T 11-10-2018 Clos_2384 5e085b07f87533263f864198c3cdccf4 712 Gene3D G3DSA:3.30.450.20 56 313 3.2E-65 T 11-10-2018 Clos_2384 5e085b07f87533263f864198c3cdccf4 712 SUPERFAMILY SSF58104 378 710 5.23E-61 T 11-10-2018 Clos_2384 5e085b07f87533263f864198c3cdccf4 712 Pfam PF02743 Cache domain 47 310 5.0E-26 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_2384 5e085b07f87533263f864198c3cdccf4 712 Gene3D G3DSA:1.20.1480.50 314 409 9.1E-10 T 11-10-2018 Clos_2384 5e085b07f87533263f864198c3cdccf4 712 Gene3D G3DSA:3.30.450.20 68 217 3.2E-65 T 11-10-2018 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 9.3E-54 T 11-10-2018 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 599 615 9.3E-54 T 11-10-2018 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 9.3E-54 T 11-10-2018 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 360 379 9.3E-54 T 11-10-2018 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 730 748 9.3E-54 T 11-10-2018 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 776 3.6E-96 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 Hamap MF_01973 Lon protease [lon]. 13 776 72.175 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 204 7.8E-40 T 11-10-2018 IPR003111 Lon, substrate-binding domain Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 SUPERFAMILY SSF52540 314 591 7.84E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 Gene3D G3DSA:2.30.130.40 8 118 4.4E-32 T 11-10-2018 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 Gene3D G3DSA:1.20.58.1480 125 249 1.4E-40 T 11-10-2018 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 SMART SM00382 352 497 4.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 TIGRFAM TIGR00763 lon: endopeptidase La 14 775 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 356 493 3.8E-23 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 680 688 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 Gene3D G3DSA:3.30.230.10 597 779 9.4E-82 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 PIRSF PIRSF001174 1 779 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 SUPERFAMILY SSF54211 599 774 1.56E-55 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 Gene3D G3DSA:1.10.8.60 496 588 5.7E-34 T 11-10-2018 Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 SMART SM00464 12 206 1.0E-63 T 11-10-2018 IPR003111 Lon, substrate-binding domain Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 SUPERFAMILY SSF88697 12 204 1.96E-44 T 11-10-2018 IPR015947 PUA-like superfamily Clos_2171 2811293adb73355e1a2ffaf214a0092f 779 Gene3D G3DSA:3.40.50.300 317 495 1.3E-68 T 11-10-2018 Clos_0216 f52f7323b76f430d14e296711b7c0449 293 SUPERFAMILY SSF159713 14 283 8.76E-52 T 11-10-2018 Clos_0216 f52f7323b76f430d14e296711b7c0449 293 Gene3D G3DSA:3.40.50.11590 133 261 2.7E-17 T 11-10-2018 Clos_0216 f52f7323b76f430d14e296711b7c0449 293 Pfam PF04016 Putative heavy-metal chelation 134 286 1.4E-39 T 11-10-2018 IPR007161 Putative heavy-metal chelation domain Clos_0216 f52f7323b76f430d14e296711b7c0449 293 Pfam PF13938 Putative heavy-metal chelation 22 110 4.5E-13 T 11-10-2018 IPR025251 Domain of unknown function DUF4213 Clos_2795 5c1345029096450adb3daf6be6405bf0 326 Pfam PF01695 IstB-like ATP binding protein 184 299 3.2E-16 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Clos_2795 5c1345029096450adb3daf6be6405bf0 326 SMART SM00382 184 309 1.7E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2795 5c1345029096450adb3daf6be6405bf0 326 SUPERFAMILY SSF52540 176 320 3.01E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2795 5c1345029096450adb3daf6be6405bf0 326 Gene3D G3DSA:3.40.50.300 123 326 6.4E-40 T 11-10-2018 Clos_0352 9b71eea150f573c7325eae7f2693caa3 154 Pfam PF00583 Acetyltransferase (GNAT) family 48 142 4.2E-12 T 11-10-2018 IPR000182 GNAT domain Clos_0352 9b71eea150f573c7325eae7f2693caa3 154 Gene3D G3DSA:3.40.630.30 14 152 1.6E-17 T 11-10-2018 Clos_0352 9b71eea150f573c7325eae7f2693caa3 154 SUPERFAMILY SSF55729 35 147 1.21E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0543 1646d7b5897de456b1a88252b674da7d 263 SUPERFAMILY SSF58104 94 260 2.88E-37 T 11-10-2018 Clos_0543 1646d7b5897de456b1a88252b674da7d 263 Gene3D G3DSA:3.40.50.720 1 96 4.8E-5 T 11-10-2018 Clos_0543 1646d7b5897de456b1a88252b674da7d 263 SUPERFAMILY SSF51735 2 134 4.84E-11 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0543 1646d7b5897de456b1a88252b674da7d 263 Gene3D G3DSA:1.10.287.950 97 263 3.6E-32 T 11-10-2018 Clos_0543 1646d7b5897de456b1a88252b674da7d 263 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 131 260 5.4E-27 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0543 1646d7b5897de456b1a88252b674da7d 263 SMART SM00283 70 259 6.1E-4 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 Pfam PF06723 MreB/Mbl protein 6 330 5.3E-148 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 Gene3D G3DSA:3.30.420.40 8 321 1.6E-129 T 11-10-2018 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 SUPERFAMILY SSF53067 143 323 3.64E-48 T 11-10-2018 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 294 320 2.1E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 63 86 2.1E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 43 61 2.1E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 126 145 2.1E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 181 201 2.1E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 4 330 5.0E-145 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 Gene3D G3DSA:3.30.420.40 148 311 1.6E-129 T 11-10-2018 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 Gene3D G3DSA:3.90.640.10 180 253 1.6E-129 T 11-10-2018 Clos_2551 2cb430866121f58da0d283cef26d15a0 340 SUPERFAMILY SSF53067 5 142 2.36E-42 T 11-10-2018 Clos_1109 04b75f0d1d2fe915d4367fa5ae212ef1 124 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 124 3.5E-48 T 11-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 Clos_1109 04b75f0d1d2fe915d4367fa5ae212ef1 124 Gene3D G3DSA:3.40.30.10 1 109 2.8E-41 T 11-10-2018 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 Gene3D G3DSA:2.30.30.30 118 196 1.5E-34 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 PIRSF PIRSF002158 4 276 5.1E-97 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 6.0E-134 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 SUPERFAMILY SSF50104 127 273 3.49E-61 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 SUPERFAMILY SSF50249 2 125 6.51E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 Gene3D G3DSA:4.10.950.10 197 276 5.2E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 2.9E-56 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 48.306 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 4.8E-34 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 SMART SM01383 42 118 1.4E-45 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 SMART SM01382 124 253 1.3E-92 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Clos_0495 09cc24c39d94b8c6c337ec52f37be2ff 276 Gene3D G3DSA:2.40.50.140 1 114 1.0E-47 T 11-10-2018 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 Gene3D G3DSA:3.10.20.600 369 463 2.5E-33 T 11-10-2018 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 SUPERFAMILY SSF52833 24 125 4.58E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 Pfam PF10531 SLBB domain 381 429 1.2E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 SUPERFAMILY SSF142019 136 377 2.22E-89 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 479 490 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 185 356 9.3E-48 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 Pfam PF13237 4Fe-4S dicluster domain 569 615 2.6E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 Gene3D G3DSA:3.30.70.20 569 622 8.2E-12 T 11-10-2018 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 Gene3D G3DSA:3.40.50.11540 190 368 1.0E-75 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 SMART SM00928 466 511 3.1E-24 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 468 551 2.0E-33 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 SUPERFAMILY SSF140490 462 563 6.28E-39 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 Gene3D G3DSA:1.20.1440.230 464 564 4.7E-35 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 SUPERFAMILY SSF54862 562 621 1.5E-13 T 11-10-2018 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 SUPERFAMILY SSF142984 378 461 1.96E-25 T 11-10-2018 Clos_0989 1fc545a43ed75f25d27ec6bc1757e709 623 Gene3D G3DSA:3.40.30.10 22 128 2.3E-25 T 11-10-2018 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.3E-59 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 60.238 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 Gene3D G3DSA:3.40.50.300 1 205 6.4E-70 T 11-10-2018 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 8.6E-16 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 Gene3D G3DSA:2.40.30.10 341 396 4.4E-28 T 11-10-2018 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 SUPERFAMILY SSF52540 6 221 4.73E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 132 141 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 79 89 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 59 67 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 95 106 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 Gene3D G3DSA:2.40.30.10 208 337 2.3E-54 T 11-10-2018 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 1.3E-226 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 5.6E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 SUPERFAMILY SSF50447 207 304 1.37E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 Pfam PF03144 Elongation factor Tu domain 2 227 297 2.9E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Clos_0476 d6cabbe1ba1ea24a79e8e8590daed108 397 SUPERFAMILY SSF50465 301 396 9.5E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.3E-59 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 60.238 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 Gene3D G3DSA:3.40.50.300 1 205 6.4E-70 T 11-10-2018 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 8.6E-16 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 Gene3D G3DSA:2.40.30.10 341 396 4.4E-28 T 11-10-2018 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 SUPERFAMILY SSF52540 6 221 4.73E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 132 141 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 79 89 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 59 67 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 PRINTS PR00315 GTP-binding elongation factor signature 95 106 6.3E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 Gene3D G3DSA:2.40.30.10 208 337 2.3E-54 T 11-10-2018 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 397 1.3E-226 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 5.6E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 SUPERFAMILY SSF50447 207 304 1.37E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 Pfam PF03144 Elongation factor Tu domain 2 227 297 2.9E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Clos_0490 d6cabbe1ba1ea24a79e8e8590daed108 397 SUPERFAMILY SSF50465 301 396 9.5E-36 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Clos_0797 9e499f55add5fa37314950e04b563f10 455 PIRSF PIRSF018788 1 455 1.1E-238 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Clos_0797 9e499f55add5fa37314950e04b563f10 455 Gene3D G3DSA:1.10.220.70 55 141 2.3E-37 T 11-10-2018 Clos_0797 9e499f55add5fa37314950e04b563f10 455 Gene3D G3DSA:2.30.170.30 1 53 1.6E-26 T 11-10-2018 Clos_0797 9e499f55add5fa37314950e04b563f10 455 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 1.0E-212 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Clos_0797 9e499f55add5fa37314950e04b563f10 455 Gene3D G3DSA:3.20.20.70 142 454 2.8E-151 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0750 744e2f8890d223821fc2a796167ad41f 455 PRINTS PR00175 Sodium/alanine symporter signature 412 432 8.7E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0750 744e2f8890d223821fc2a796167ad41f 455 PRINTS PR00175 Sodium/alanine symporter signature 213 232 8.7E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0750 744e2f8890d223821fc2a796167ad41f 455 PRINTS PR00175 Sodium/alanine symporter signature 94 116 8.7E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0750 744e2f8890d223821fc2a796167ad41f 455 PRINTS PR00175 Sodium/alanine symporter signature 308 326 8.7E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0750 744e2f8890d223821fc2a796167ad41f 455 PRINTS PR00175 Sodium/alanine symporter signature 185 203 8.7E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0750 744e2f8890d223821fc2a796167ad41f 455 PRINTS PR00175 Sodium/alanine symporter signature 353 375 8.7E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0750 744e2f8890d223821fc2a796167ad41f 455 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 5.5E-139 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0750 744e2f8890d223821fc2a796167ad41f 455 Pfam PF01235 Sodium:alanine symporter family 56 450 2.5E-129 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_0750 744e2f8890d223821fc2a796167ad41f 455 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 94 109 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_2215 8462ab5ad84684ee2f603d6fb25f70c7 236 Gene3D G3DSA:3.40.50.300 1 233 3.0E-67 T 11-10-2018 Clos_2215 8462ab5ad84684ee2f603d6fb25f70c7 236 SMART SM00382 27 225 4.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2215 8462ab5ad84684ee2f603d6fb25f70c7 236 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2215 8462ab5ad84684ee2f603d6fb25f70c7 236 SUPERFAMILY SSF52540 3 229 1.66E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2215 8462ab5ad84684ee2f603d6fb25f70c7 236 Pfam PF00005 ABC transporter 22 158 4.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1724 0850d186fa58e1f29c74c118464c25c6 536 Gene3D G3DSA:3.30.70.1070 92 161 1.8E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Clos_1724 0850d186fa58e1f29c74c118464c25c6 536 Pfam PF08486 Stage II sporulation protein 218 308 4.7E-26 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Clos_1724 0850d186fa58e1f29c74c118464c25c6 536 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 223 535 1.3E-76 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Clos_1054 94a3e977ebc3bd9f6f6cc0f7ba47dfd7 237 Gene3D G3DSA:3.40.50.300 39 222 9.1E-40 T 11-10-2018 Clos_1054 94a3e977ebc3bd9f6f6cc0f7ba47dfd7 237 Pfam PF01695 IstB-like ATP binding protein 93 203 1.0E-16 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Clos_1054 94a3e977ebc3bd9f6f6cc0f7ba47dfd7 237 SUPERFAMILY SSF52540 59 236 1.31E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2263 52b465c0152a3762f345381f40295e49 189 Gene3D G3DSA:3.40.50.10420 1 189 2.5E-59 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Clos_2263 52b465c0152a3762f345381f40295e49 189 PIRSF PIRSF006806 1 185 2.2E-49 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Clos_2263 52b465c0152a3762f345381f40295e49 189 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 182 1.4E-45 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Clos_2263 52b465c0152a3762f345381f40295e49 189 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 182 6.2E-54 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Clos_2263 52b465c0152a3762f345381f40295e49 189 SUPERFAMILY SSF100950 1 188 4.19E-48 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_2406 8c5aafa9f7f6a7482ef944fd2af72006 407 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 392 2.6E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2406 8c5aafa9f7f6a7482ef944fd2af72006 407 SUPERFAMILY SSF55874 252 390 7.07E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2406 8c5aafa9f7f6a7482ef944fd2af72006 407 Pfam PF10114 Sensory domain found in PocR 26 164 1.5E-7 T 11-10-2018 IPR018771 PocR domain Clos_2406 8c5aafa9f7f6a7482ef944fd2af72006 407 Gene3D G3DSA:3.30.565.10 247 395 9.3E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2406 8c5aafa9f7f6a7482ef944fd2af72006 407 SMART SM00387 289 393 3.8E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2406 8c5aafa9f7f6a7482ef944fd2af72006 407 Pfam PF06580 Histidine kinase 197 274 3.0E-20 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Clos_0524 7ccad973773473f0bbabb14ee16cf028 287 Pfam PF00005 ABC transporter 23 173 1.2E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0524 7ccad973773473f0bbabb14ee16cf028 287 SUPERFAMILY SSF52540 3 237 7.19E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0524 7ccad973773473f0bbabb14ee16cf028 287 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 278 4.0E-124 T 11-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 Clos_0524 7ccad973773473f0bbabb14ee16cf028 287 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0524 7ccad973773473f0bbabb14ee16cf028 287 Gene3D G3DSA:3.40.50.300 1 287 9.1E-88 T 11-10-2018 Clos_0524 7ccad973773473f0bbabb14ee16cf028 287 SMART SM00382 32 222 1.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1983 f6f3755afa0cd39fd655b0cb1af328c9 85 Pfam PF04023 FeoA domain 11 82 5.9E-15 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Clos_1983 f6f3755afa0cd39fd655b0cb1af328c9 85 SMART SM00899 11 83 1.1E-18 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Clos_1983 f6f3755afa0cd39fd655b0cb1af328c9 85 SUPERFAMILY SSF50037 15 84 3.43E-18 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal Clos_1983 f6f3755afa0cd39fd655b0cb1af328c9 85 Gene3D G3DSA:2.30.30.90 8 85 2.4E-21 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 Pfam PF00403 Heavy-metal-associated domain 6 67 1.6E-16 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 Pfam PF00403 Heavy-metal-associated domain 79 139 1.9E-17 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 Pfam PF00122 E1-E2 ATPase 305 482 5.6E-60 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 SUPERFAMILY SSF55008 6 69 1.57E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 79 139 7.5E-13 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 68 9.8E-13 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 Gene3D G3DSA:2.70.150.20 297 409 1.4E-43 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00942 Copper-transporting ATPase 1 signature 219 244 3.6E-16 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00942 Copper-transporting ATPase 1 signature 4 29 3.6E-16 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00942 Copper-transporting ATPase 1 signature 99 120 3.6E-16 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00942 Copper-transporting ATPase 1 signature 30 53 3.6E-16 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 SUPERFAMILY SSF81653 307 404 7.72E-30 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 Pfam PF00702 haloacid dehalogenase-like hydrolase 500 716 3.8E-50 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 506 512 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 SUPERFAMILY SSF56784 502 809 1.39E-64 T 11-10-2018 IPR036412 HAD-like superfamily Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 Gene3D G3DSA:3.30.70.100 72 140 1.9E-21 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 Gene3D G3DSA:3.30.70.100 3 68 4.6E-20 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 236 811 1.2E-201 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 217 812 1.1E-192 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 Gene3D G3DSA:3.40.50.1000 485 754 5.7E-101 T 11-10-2018 IPR023214 HAD superfamily Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 SUPERFAMILY SSF81665 271 791 2.35E-14 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 780 1.4E-97 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 504 518 2.8E-30 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 638 2.8E-30 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 659 2.8E-30 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 702 721 2.8E-30 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 354 368 2.8E-30 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 725 737 2.8E-30 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 270 811 1.8E-125 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 ProSitePatterns PS01047 Heavy-metal-associated domain. 81 110 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 Gene3D G3DSA:3.40.1110.10 515 634 5.7E-101 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 SUPERFAMILY SSF55008 72 142 9.29E-22 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 679 696 2.5E-27 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 294 312 2.5E-27 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 487 502 2.5E-27 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 775 789 2.5E-27 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 120 140 2.5E-27 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 736 750 2.5E-27 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 427 441 2.5E-27 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 274 293 2.5E-27 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 221 240 2.5E-27 T 11-10-2018 Clos_0054 07eddc00fbac7db4ba837657dd9bcb22 819 PRINTS PR00943 Copper-transporting ATPase signature 91 105 2.5E-27 T 11-10-2018 Clos_1511 71e82606ee372291421c185f4ad8791d 602 SUPERFAMILY SSF63848 349 399 7.19E-5 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Clos_1511 71e82606ee372291421c185f4ad8791d 602 Pfam PF03961 Flagellar Assembly Protein A 149 595 3.0E-136 T 11-10-2018 IPR005646 Flagellar assembly protein A Clos_1511 71e82606ee372291421c185f4ad8791d 602 Pfam PF14804 Jag N-terminus 11 46 1.7E-7 T 11-10-2018 IPR032782 Jag, N-terminal Clos_1511 71e82606ee372291421c185f4ad8791d 602 Gene3D G3DSA:3.30.30.80 4 51 1.8E-5 T 11-10-2018 IPR038247 Jag, N-terminal domain superfamily Clos_1511 71e82606ee372291421c185f4ad8791d 602 SMART SM01245 9 58 4.0E-10 T 11-10-2018 IPR032782 Jag, N-terminal Clos_2779 089a2e1dd0ca30999af9fe05f4fd2787 420 SUPERFAMILY SSF55205 1 416 3.11E-134 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Clos_2779 089a2e1dd0ca30999af9fe05f4fd2787 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 2.2E-95 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Clos_2779 089a2e1dd0ca30999af9fe05f4fd2787 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 8.0E-169 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2779 089a2e1dd0ca30999af9fe05f4fd2787 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 42.795 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2779 089a2e1dd0ca30999af9fe05f4fd2787 420 Gene3D G3DSA:3.65.10.10 21 230 2.5E-161 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Clos_2779 089a2e1dd0ca30999af9fe05f4fd2787 420 Gene3D G3DSA:3.65.10.10 6 413 2.5E-161 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Clos_0813 dcf5f99a523cd7c035e3e6c43508a362 398 SUPERFAMILY SSF89796 3 398 3.66E-130 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Clos_0813 dcf5f99a523cd7c035e3e6c43508a362 398 Pfam PF02515 CoA-transferase family III 6 374 1.0E-128 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 Clos_0813 dcf5f99a523cd7c035e3e6c43508a362 398 Gene3D G3DSA:3.40.50.10540 6 392 1.2E-136 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Clos_0813 dcf5f99a523cd7c035e3e6c43508a362 398 Gene3D G3DSA:3.30.1540.10 232 324 1.2E-136 T 11-10-2018 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 Gene3D G3DSA:3.10.20.740 3 123 2.5E-38 T 11-10-2018 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0990 a56ecff35d731934f76bb6c0de023487 567 SUPERFAMILY SSF53920 188 561 2.09E-116 T 11-10-2018 IPR009016 Iron hydrogenase Clos_0990 a56ecff35d731934f76bb6c0de023487 567 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 32 49 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 222 507 9.3E-97 T 11-10-2018 IPR004108 Iron hydrogenase, large subunit, C-terminal Clos_0990 a56ecff35d731934f76bb6c0de023487 567 Pfam PF12838 4Fe-4S dicluster domain 145 203 2.7E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0990 a56ecff35d731934f76bb6c0de023487 567 Gene3D G3DSA:3.40.950.10 271 501 1.0E-142 T 11-10-2018 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 SMART SM00929 83 123 7.5E-20 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 Gene3D G3DSA:3.40.50.1780 205 511 1.0E-142 T 11-10-2018 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 Pfam PF02256 Iron hydrogenase small subunit 516 561 1.9E-6 T 11-10-2018 IPR003149 Iron hydrogenase, small subunit Clos_0990 a56ecff35d731934f76bb6c0de023487 567 SUPERFAMILY SSF54292 6 74 6.3E-16 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 SUPERFAMILY SSF54862 75 214 4.6E-39 T 11-10-2018 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 Gene3D G3DSA:3.30.70.20 142 204 1.0E-142 T 11-10-2018 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 138 511 4.8E-145 T 11-10-2018 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 1.6E-17 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0990 a56ecff35d731934f76bb6c0de023487 567 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 7 76 2.2E-11 T 11-10-2018 Clos_1592 1dcd986fa212a9e2a5964e056c5f8306 390 SUPERFAMILY SSF143856 99 214 4.58E-48 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Clos_1592 1dcd986fa212a9e2a5964e056c5f8306 390 Gene3D G3DSA:3.40.720.10 4 384 1.4E-166 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Clos_1592 1dcd986fa212a9e2a5964e056c5f8306 390 Gene3D G3DSA:3.30.70.1250 97 214 1.4E-166 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Clos_1592 1dcd986fa212a9e2a5964e056c5f8306 390 PIRSF PIRSF001491 1 389 1.1E-156 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Clos_1592 1dcd986fa212a9e2a5964e056c5f8306 390 SUPERFAMILY SSF53649 1 386 2.51E-77 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Clos_1592 1dcd986fa212a9e2a5964e056c5f8306 390 Hamap MF_00740 Phosphopentomutase [deoB]. 2 385 52.791 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Clos_1592 1dcd986fa212a9e2a5964e056c5f8306 390 TIGRFAM TIGR01696 deoB: phosphopentomutase 4 381 7.5E-164 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Clos_1592 1dcd986fa212a9e2a5964e056c5f8306 390 Pfam PF01676 Metalloenzyme superfamily 4 375 1.5E-40 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Clos_0871 9b38e08a37d48363e847ce233e2b1ccb 518 SUPERFAMILY SSF52210 181 313 3.01E-18 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0871 9b38e08a37d48363e847ce233e2b1ccb 518 Gene3D G3DSA:3.40.50.720 103 186 3.6E-136 T 11-10-2018 Clos_0871 9b38e08a37d48363e847ce233e2b1ccb 518 Gene3D G3DSA:3.40.50.261 347 517 3.6E-136 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0871 9b38e08a37d48363e847ce233e2b1ccb 518 Pfam PF02629 CoA binding domain 188 282 3.8E-16 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Clos_0871 9b38e08a37d48363e847ce233e2b1ccb 518 SUPERFAMILY SSF52210 354 514 3.3E-7 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0871 9b38e08a37d48363e847ce233e2b1ccb 518 Pfam PF00549 CoA-ligase 351 512 2.7E-57 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0871 9b38e08a37d48363e847ce233e2b1ccb 518 Gene3D G3DSA:3.40.50.261 188 346 3.6E-136 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_2407 2edda3c81feac72feabe566242bfb110 253 Gene3D G3DSA:3.40.50.2300 2 138 2.9E-26 T 11-10-2018 Clos_2407 2edda3c81feac72feabe566242bfb110 253 Gene3D G3DSA:1.10.10.60 195 252 2.0E-19 T 11-10-2018 Clos_2407 2edda3c81feac72feabe566242bfb110 253 SMART SM00342 162 245 3.8E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2407 2edda3c81feac72feabe566242bfb110 253 Gene3D G3DSA:1.10.10.60 142 194 4.3E-19 T 11-10-2018 Clos_2407 2edda3c81feac72feabe566242bfb110 253 Pfam PF00072 Response regulator receiver domain 4 115 9.7E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2407 2edda3c81feac72feabe566242bfb110 253 SUPERFAMILY SSF46689 146 196 2.42E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2407 2edda3c81feac72feabe566242bfb110 253 SUPERFAMILY SSF46689 198 248 1.52E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2407 2edda3c81feac72feabe566242bfb110 253 Pfam PF12833 Helix-turn-helix domain 169 246 1.8E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2407 2edda3c81feac72feabe566242bfb110 253 SUPERFAMILY SSF52172 4 127 3.56E-26 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2407 2edda3c81feac72feabe566242bfb110 253 SMART SM00448 2 116 1.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1370 7816b758fd48225619568b57968ad8d2 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 2.0E-62 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Clos_1370 7816b758fd48225619568b57968ad8d2 143 SUPERFAMILY SSF89447 1 135 7.48E-51 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily Clos_1370 7816b758fd48225619568b57968ad8d2 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 56.309 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Clos_1370 7816b758fd48225619568b57968ad8d2 143 Gene3D G3DSA:2.40.330.20 1 142 1.8E-53 T 11-10-2018 IPR038619 MraZ superfamily Clos_1370 7816b758fd48225619568b57968ad8d2 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 138 1.1E-21 T 11-10-2018 IPR020603 MraZ domain Clos_1370 7816b758fd48225619568b57968ad8d2 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 1.4E-21 T 11-10-2018 IPR020603 MraZ domain Clos_1370 7816b758fd48225619568b57968ad8d2 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 141 2.8E-51 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Clos_0366 bdbc4e93fe56781255fbfe7da74eb6b6 88 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 37 3.0E-10 T 11-10-2018 Clos_0366 bdbc4e93fe56781255fbfe7da74eb6b6 88 SUPERFAMILY SSF143414 4 88 1.44E-28 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_0366 bdbc4e93fe56781255fbfe7da74eb6b6 88 SMART SM00877 4 80 2.3E-32 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0366 bdbc4e93fe56781255fbfe7da74eb6b6 88 Gene3D G3DSA:3.30.70.1710 1 88 6.3E-34 T 11-10-2018 Clos_0366 bdbc4e93fe56781255fbfe7da74eb6b6 88 Pfam PF00936 BMC domain 5 80 5.5E-25 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0925 c3f8467ce9c0f00f18c1bb8fd044ff98 473 PIRSF PIRSF019015 2 473 1.9E-131 T 11-10-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type Clos_0925 c3f8467ce9c0f00f18c1bb8fd044ff98 473 Pfam PF12913 SH3 domain (SH3b1 type) 163 211 1.4E-16 T 11-10-2018 IPR039439 SH3b1 domain Clos_0925 c3f8467ce9c0f00f18c1bb8fd044ff98 473 Pfam PF00877 NlpC/P60 family 330 422 2.5E-11 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Clos_0925 c3f8467ce9c0f00f18c1bb8fd044ff98 473 Gene3D G3DSA:3.90.1720.10 302 464 7.2E-34 T 11-10-2018 Clos_0925 c3f8467ce9c0f00f18c1bb8fd044ff98 473 SUPERFAMILY SSF54001 313 439 1.73E-15 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 825 1244 5.2E-92 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Gene3D G3DSA:1.10.150.700 1237 1287 1.3E-13 T 11-10-2018 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Gene3D G3DSA:1.10.150.700 1097 1190 7.2E-32 T 11-10-2018 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Pfam PF14579 Helix-hairpin-helix motif 1350 1431 3.0E-15 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 423 640 8.6E-39 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 SUPERFAMILY SSF89550 339 420 9.22E-22 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Pfam PF02811 PHP domain 342 698 1.2E-50 T 11-10-2018 IPR004013 PHP domain GO:0003824 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Gene3D G3DSA:3.20.20.140 340 420 1.4E-25 T 11-10-2018 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Gene3D G3DSA:3.20.20.140 568 804 1.0E-56 T 11-10-2018 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 SUPERFAMILY SSF53098 425 878 1.67E-107 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Gene3D G3DSA:2.40.50.140 230 328 4.6E-22 T 11-10-2018 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 SMART SM00481 341 408 3.2E-26 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Gene3D G3DSA:3.30.420.10 421 561 4.4E-45 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Pfam PF11490 DNA polymerase III polC-type N-terminus II 95 205 6.6E-19 T 11-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 SMART SM00479 425 590 9.9E-53 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 SUPERFAMILY SSF160975 1376 1421 7.72E-8 T 11-10-2018 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Pfam PF00929 Exonuclease 427 581 3.5E-37 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Pfam PF14480 DNA polymerase III polC-type N-terminus I 8 75 4.6E-8 T 11-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Gene3D G3DSA:3.30.1900.20 974 1096 9.0E-57 T 11-10-2018 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 238 1438 0.0 T 11-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Gene3D G3DSA:1.10.150.870 1288 1424 5.4E-51 T 11-10-2018 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Gene3D G3DSA:1.10.100.20 996 1043 9.0E-57 T 11-10-2018 Clos_1523 5b0feb29f61c7c755881a420d89c3a18 1441 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1441 386.177 T 11-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1759 a605bf9d3bec30b81e3528d5477191a9 93 Pfam PF03776 Septum formation topological specificity factor MinE 14 86 1.2E-26 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Clos_1759 a605bf9d3bec30b81e3528d5477191a9 93 Gene3D G3DSA:3.30.1070.10 1 80 4.4E-16 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Clos_1759 a605bf9d3bec30b81e3528d5477191a9 93 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 91 16.691 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Clos_1759 a605bf9d3bec30b81e3528d5477191a9 93 SUPERFAMILY SSF55229 31 89 7.98E-12 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Clos_1759 a605bf9d3bec30b81e3528d5477191a9 93 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 86 3.9E-22 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 3 150 32.823 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 7 25 3.5E-37 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 75 93 3.5E-37 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 30 48 3.5E-37 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 51 69 3.5E-37 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 116 135 3.5E-37 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 6 147 1.9E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 PIRSF PIRSF006160 3 150 6.0E-59 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 11 144 6.0E-46 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 Gene3D G3DSA:3.30.1360.80 2 151 1.5E-55 T 11-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1075 355b0be2f3761d4939b879fdc7626b7b 152 SUPERFAMILY SSF63411 4 147 4.94E-57 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_0236 6dfd63c88b0c4d3c4fc8a77a03ebca97 313 SUPERFAMILY SSF55890 90 175 1.24E-13 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Clos_0236 6dfd63c88b0c4d3c4fc8a77a03ebca97 313 Gene3D G3DSA:1.10.287.130 74 144 1.6E-7 T 11-10-2018 Clos_0236 6dfd63c88b0c4d3c4fc8a77a03ebca97 313 SUPERFAMILY SSF55874 164 294 1.01E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0236 6dfd63c88b0c4d3c4fc8a77a03ebca97 313 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 87 138 8.5E-15 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain Clos_0236 6dfd63c88b0c4d3c4fc8a77a03ebca97 313 Pfam PF14501 GHKL domain 187 284 1.1E-16 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Clos_0236 6dfd63c88b0c4d3c4fc8a77a03ebca97 313 Gene3D G3DSA:3.30.565.10 145 293 1.9E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0236 6dfd63c88b0c4d3c4fc8a77a03ebca97 313 SMART SM00387 186 297 1.8E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0820 52a51d2d3d42000de744b2eee5881077 584 SMART SM00382 369 541 2.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0820 52a51d2d3d42000de744b2eee5881077 584 SUPERFAMILY SSF90123 2 327 4.45E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0820 52a51d2d3d42000de744b2eee5881077 584 Gene3D G3DSA:3.40.50.300 335 584 9.3E-84 T 11-10-2018 Clos_0820 52a51d2d3d42000de744b2eee5881077 584 SUPERFAMILY SSF52540 335 580 3.11E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0820 52a51d2d3d42000de744b2eee5881077 584 Pfam PF00005 ABC transporter 361 509 1.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0820 52a51d2d3d42000de744b2eee5881077 584 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0820 52a51d2d3d42000de744b2eee5881077 584 Pfam PF00664 ABC transporter transmembrane region 19 297 2.8E-48 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_0820 52a51d2d3d42000de744b2eee5881077 584 Gene3D G3DSA:1.20.1560.10 1 330 8.7E-84 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0846 3b8b719f48e676c81aa1fee24ad8fa53 318 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 303 6.9E-70 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Clos_0846 3b8b719f48e676c81aa1fee24ad8fa53 318 Gene3D G3DSA:3.40.50.1100 7 307 1.3E-97 T 11-10-2018 Clos_0846 3b8b719f48e676c81aa1fee24ad8fa53 318 Gene3D G3DSA:3.40.50.1100 49 146 1.3E-97 T 11-10-2018 Clos_0846 3b8b719f48e676c81aa1fee24ad8fa53 318 SUPERFAMILY SSF53686 3 313 2.75E-82 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clos_1206 f73f4014964196456d4635f13b655924 894 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 169 1.1E-52 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Clos_1206 f73f4014964196456d4635f13b655924 894 Pfam PF00476 DNA polymerase family A 519 892 4.8E-160 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 SUPERFAMILY SSF53098 309 486 4.4E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_1206 f73f4014964196456d4635f13b655924 894 SMART SM00482 652 858 3.1E-114 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 ProSitePatterns PS00447 DNA polymerase family A signature. 720 739 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 SUPERFAMILY SSF47807 171 285 7.18E-35 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Clos_1206 f73f4014964196456d4635f13b655924 894 SUPERFAMILY SSF88723 2 169 1.51E-53 T 11-10-2018 IPR029060 PIN-like domain superfamily Clos_1206 f73f4014964196456d4635f13b655924 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 666 689 4.2E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 621 643 4.2E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 779 790 4.2E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 720 745 4.2E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 841 854 4.2E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 644 659 4.2E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 696 709 4.2E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 811 827 4.2E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 768 4.2E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 SUPERFAMILY SSF56672 489 894 1.11E-159 T 11-10-2018 Clos_1206 f73f4014964196456d4635f13b655924 894 Gene3D G3DSA:3.40.50.1010 6 278 4.4E-102 T 11-10-2018 Clos_1206 f73f4014964196456d4635f13b655924 894 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 265 9.5E-34 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Clos_1206 f73f4014964196456d4635f13b655924 894 Gene3D G3DSA:3.30.70.370 630 890 1.5E-108 T 11-10-2018 Clos_1206 f73f4014964196456d4635f13b655924 894 SMART SM00475 3 262 3.4E-135 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Clos_1206 f73f4014964196456d4635f13b655924 894 SMART SM00474 306 485 2.9E-13 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Clos_1206 f73f4014964196456d4635f13b655924 894 Gene3D G3DSA:1.20.1060.10 510 623 5.4E-44 T 11-10-2018 Clos_1206 f73f4014964196456d4635f13b655924 894 Gene3D G3DSA:1.10.150.20 174 247 4.4E-102 T 11-10-2018 Clos_1206 f73f4014964196456d4635f13b655924 894 SMART SM00279 173 208 2.2E-18 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Clos_1206 f73f4014964196456d4635f13b655924 894 Pfam PF01612 3'-5' exonuclease 307 456 1.4E-11 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Clos_1206 f73f4014964196456d4635f13b655924 894 Gene3D G3DSA:3.30.420.10 304 508 4.6E-44 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_1206 f73f4014964196456d4635f13b655924 894 TIGRFAM TIGR00593 pola: DNA polymerase I 6 894 0.0 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_1206 f73f4014964196456d4635f13b655924 894 Gene3D G3DSA:1.10.150.20 675 818 1.5E-108 T 11-10-2018 Clos_1084 561a9a22008dd9ae62c1d28f34cda3dc 218 SUPERFAMILY SSF53335 13 178 5.18E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1084 561a9a22008dd9ae62c1d28f34cda3dc 218 Gene3D G3DSA:3.40.50.150 18 209 1.5E-30 T 11-10-2018 Clos_1084 561a9a22008dd9ae62c1d28f34cda3dc 218 Pfam PF13649 Methyltransferase domain 49 145 1.2E-20 T 11-10-2018 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 Gene3D G3DSA:3.40.50.10490 10 214 5.8E-96 T 11-10-2018 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.0E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.0E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.0E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.0E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.0E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.0E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 Gene3D G3DSA:1.10.287.610 97 152 5.8E-96 T 11-10-2018 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 SUPERFAMILY SSF52313 6 229 1.18E-100 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 Pfam PF00318 Ribosomal protein S2 9 224 6.0E-104 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.4E-112 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Clos_1513 bfdc8f5486f1566c411d0a0cfc201728 232 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.931 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0165 cde6a77f3dbdf9e8f80b86cc89668a84 267 Gene3D G3DSA:1.10.12.10 209 267 9.1E-21 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Clos_0165 cde6a77f3dbdf9e8f80b86cc89668a84 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 266 2.9E-69 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Clos_0165 cde6a77f3dbdf9e8f80b86cc89668a84 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Clos_0165 cde6a77f3dbdf9e8f80b86cc89668a84 267 SUPERFAMILY SSF52096 9 265 3.53E-91 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_0165 cde6a77f3dbdf9e8f80b86cc89668a84 267 Gene3D G3DSA:3.90.226.10 2 208 1.2E-76 T 11-10-2018 Clos_2049 99d0a0331c2d609b0f73bd4f084c82cd 71 SUPERFAMILY SSF55008 3 67 1.31E-16 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_2049 99d0a0331c2d609b0f73bd4f084c82cd 71 Pfam PF00403 Heavy-metal-associated domain 5 66 1.9E-12 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_2049 99d0a0331c2d609b0f73bd4f084c82cd 71 Gene3D G3DSA:3.30.70.100 1 67 8.3E-17 T 11-10-2018 Clos_0518 7f1057bae45adc3a1fbfec8088d87e7e 123 SUPERFAMILY SSF46946 2 121 3.79E-47 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Clos_0518 7f1057bae45adc3a1fbfec8088d87e7e 123 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 2.4E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0518 7f1057bae45adc3a1fbfec8088d87e7e 123 PIRSF PIRSF002134 1 123 2.4E-46 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0518 7f1057bae45adc3a1fbfec8088d87e7e 123 Gene3D G3DSA:1.10.8.50 1 72 3.5E-31 T 11-10-2018 Clos_0518 7f1057bae45adc3a1fbfec8088d87e7e 123 Pfam PF00416 Ribosomal protein S13/S18 3 109 3.6E-35 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0518 7f1057bae45adc3a1fbfec8088d87e7e 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 28.368 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0518 7f1057bae45adc3a1fbfec8088d87e7e 123 Gene3D G3DSA:4.10.910.10 73 123 1.9E-25 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0518 7f1057bae45adc3a1fbfec8088d87e7e 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_2812 12b266a52ec72b0aaf9462603290e299 335 Pfam PF01032 FecCD transport family 19 328 2.2E-82 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_2812 12b266a52ec72b0aaf9462603290e299 335 SUPERFAMILY SSF81345 7 328 3.27E-76 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2812 12b266a52ec72b0aaf9462603290e299 335 Gene3D G3DSA:1.10.3470.10 5 332 6.0E-83 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0570 38617f0e31fc45f8c9b5316051536bd8 320 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 320 2.4E-116 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0570 38617f0e31fc45f8c9b5316051536bd8 320 Pfam PF04055 Radical SAM superfamily 14 175 1.8E-33 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_0570 38617f0e31fc45f8c9b5316051536bd8 320 SUPERFAMILY SSF102114 3 282 8.5E-78 T 11-10-2018 Clos_0570 38617f0e31fc45f8c9b5316051536bd8 320 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0570 38617f0e31fc45f8c9b5316051536bd8 320 SMART SM00729 10 214 2.3E-19 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_0570 38617f0e31fc45f8c9b5316051536bd8 320 Gene3D G3DSA:3.20.20.70 1 320 3.4E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0570 38617f0e31fc45f8c9b5316051536bd8 320 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 1 320 39.677 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0570 38617f0e31fc45f8c9b5316051536bd8 320 Pfam PF06463 Molybdenum Cofactor Synthesis C 181 302 9.7E-37 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0570 38617f0e31fc45f8c9b5316051536bd8 320 Pfam PF13353 4Fe-4S single cluster domain 20 121 1.1E-7 T 11-10-2018 Clos_0157 5e740963fc284c7a3c0c27e533e45ddc 175 SUPERFAMILY SSF88659 113 171 1.59E-8 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_0157 5e740963fc284c7a3c0c27e533e45ddc 175 Gene3D G3DSA:1.10.10.10 103 173 9.0E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1423 8a0f308928a896e6618d2f9d8a4d004f 200 Gene3D G3DSA:3.40.50.300 9 182 2.4E-63 T 11-10-2018 Clos_1423 8a0f308928a896e6618d2f9d8a4d004f 200 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Clos_1423 8a0f308928a896e6618d2f9d8a4d004f 200 SMART SM00072 4 186 6.5E-53 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Clos_1423 8a0f308928a896e6618d2f9d8a4d004f 200 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 183 1.9E-71 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Clos_1423 8a0f308928a896e6618d2f9d8a4d004f 200 Gene3D G3DSA:3.30.63.10 36 95 2.4E-63 T 11-10-2018 Clos_1423 8a0f308928a896e6618d2f9d8a4d004f 200 Hamap MF_00328 Guanylate kinase [gmk]. 3 186 36.071 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Clos_1423 8a0f308928a896e6618d2f9d8a4d004f 200 SUPERFAMILY SSF52540 3 189 5.15E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1423 8a0f308928a896e6618d2f9d8a4d004f 200 Pfam PF00625 Guanylate kinase 7 184 1.6E-44 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 SMART SM00382 162 312 3.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 Gene3D G3DSA:1.10.10.60 387 456 9.8E-9 T 11-10-2018 Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 Gene3D G3DSA:1.10.8.60 312 386 1.2E-26 T 11-10-2018 Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 SUPERFAMILY SSF46689 400 453 4.12E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 Gene3D G3DSA:3.40.50.300 127 311 4.4E-55 T 11-10-2018 Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 SUPERFAMILY SSF52540 141 383 5.01E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 Pfam PF00158 Sigma-54 interaction domain 142 307 1.5E-55 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0187 28e7b4dd72125e1b2f436f921c661e95 457 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_2646 53594c830e6ee59f09a0998435efd85f 455 Gene3D G3DSA:3.90.550.10 1 249 2.2E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_2646 53594c830e6ee59f09a0998435efd85f 455 Gene3D G3DSA:2.160.10.10 250 436 1.2E-51 T 11-10-2018 Clos_2646 53594c830e6ee59f09a0998435efd85f 455 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 282 309 1.9E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Clos_2646 53594c830e6ee59f09a0998435efd85f 455 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 392 426 0.039 T 11-10-2018 IPR001451 Hexapeptide repeat Clos_2646 53594c830e6ee59f09a0998435efd85f 455 Pfam PF12804 MobA-like NTP transferase domain 5 129 4.6E-19 T 11-10-2018 IPR025877 MobA-like NTP transferase Clos_2646 53594c830e6ee59f09a0998435efd85f 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 1.7E-7 T 11-10-2018 IPR001451 Hexapeptide repeat Clos_2646 53594c830e6ee59f09a0998435efd85f 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 450 3.6E-177 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Clos_2646 53594c830e6ee59f09a0998435efd85f 455 SUPERFAMILY SSF51161 246 450 4.1E-49 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Clos_2646 53594c830e6ee59f09a0998435efd85f 455 SUPERFAMILY SSF53448 3 250 1.0E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_2646 53594c830e6ee59f09a0998435efd85f 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 40.849 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 Pfam PF01479 S4 domain 1 42 4.4E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 Gene3D G3DSA:3.30.70.1560 123 213 1.8E-57 T 11-10-2018 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 224 6.1E-50 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 SUPERFAMILY SSF55120 52 233 1.77E-48 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 Gene3D G3DSA:3.10.290.10 1 56 5.9E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 SUPERFAMILY SSF55174 1 57 3.14E-14 T 11-10-2018 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 Gene3D G3DSA:3.30.70.580 64 221 1.8E-57 T 11-10-2018 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 SMART SM00363 1 61 1.1E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1577 5ac642138218deb746bef1283dc06ed3 234 Pfam PF00849 RNA pseudouridylate synthase 63 194 5.3E-23 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 PIRSF PIRSF016578 6 379 4.8E-25 T 11-10-2018 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 2.0E-29 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 SUPERFAMILY SSF56645 1 242 2.23E-91 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 SUPERFAMILY SSF47203 227 379 6.28E-63 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 Gene3D G3DSA:1.20.140.10 235 379 1.7E-59 T 11-10-2018 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 2.2E-36 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 4.7E-55 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 Gene3D G3DSA:1.10.540.10 1 120 5.7E-43 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Clos_0091 1fb3d5acd7f21bfa688f4a98b2c316a1 379 Gene3D G3DSA:2.40.110.10 121 234 1.7E-46 T 11-10-2018 Clos_2473 1e075a03fc313ccea48987af717d20c8 546 Gene3D G3DSA:1.10.287.130 271 383 4.6E-13 T 11-10-2018 Clos_2473 1e075a03fc313ccea48987af717d20c8 546 SUPERFAMILY SSF47384 303 382 4.32E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_2473 1e075a03fc313ccea48987af717d20c8 546 SMART SM00387 428 540 7.1E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2473 1e075a03fc313ccea48987af717d20c8 546 Gene3D G3DSA:3.30.565.10 388 544 3.7E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2473 1e075a03fc313ccea48987af717d20c8 546 SUPERFAMILY SSF55874 387 540 3.54E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2473 1e075a03fc313ccea48987af717d20c8 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 3.1E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2473 1e075a03fc313ccea48987af717d20c8 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 537 3.1E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2473 1e075a03fc313ccea48987af717d20c8 546 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 518 3.1E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2473 1e075a03fc313ccea48987af717d20c8 546 SMART SM00388 318 386 1.8E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2473 1e075a03fc313ccea48987af717d20c8 546 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 539 2.6E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2645 ec5d0d48c77209d61c3ed77db16a59ca 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Clos_2645 ec5d0d48c77209d61c3ed77db16a59ca 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 315 1.0E-131 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Clos_2645 ec5d0d48c77209d61c3ed77db16a59ca 315 SUPERFAMILY SSF53271 73 306 9.65E-68 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_2645 ec5d0d48c77209d61c3ed77db16a59ca 315 SMART SM01400 8 124 1.1E-82 T 11-10-2018 Clos_2645 ec5d0d48c77209d61c3ed77db16a59ca 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 8 315 51.619 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Clos_2645 ec5d0d48c77209d61c3ed77db16a59ca 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 124 1.0E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Clos_2645 ec5d0d48c77209d61c3ed77db16a59ca 315 Gene3D G3DSA:3.40.50.2020 151 291 7.5E-131 T 11-10-2018 Clos_2645 ec5d0d48c77209d61c3ed77db16a59ca 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 314 4.0E-25 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Clos_2645 ec5d0d48c77209d61c3ed77db16a59ca 315 Gene3D G3DSA:3.40.50.2020 11 303 7.5E-131 T 11-10-2018 Clos_1668 6af5102f83cc0a30629a73def8a2ebcc 178 Pfam PF05239 PRC-barrel domain 89 155 2.6E-8 T 11-10-2018 IPR027275 PRC-barrel domain Clos_1668 6af5102f83cc0a30629a73def8a2ebcc 178 SUPERFAMILY SSF50346 89 142 1.91E-7 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Clos_1381 a693ff1e66fe9c7c617fd34f8e5d6471 260 Pfam PF03799 Cell division protein FtsQ 122 245 1.6E-4 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB Clos_1381 a693ff1e66fe9c7c617fd34f8e5d6471 260 Pfam PF08478 POTRA domain, FtsQ-type 45 112 6.9E-19 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type Clos_1381 a693ff1e66fe9c7c617fd34f8e5d6471 260 Gene3D G3DSA:3.10.20.310 44 111 2.6E-10 T 11-10-2018 Clos_1096 1c320ac30ef96f60f6614b9b6eb70419 850 SMART SM00926 46 100 5.2E-6 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_1096 1c320ac30ef96f60f6614b9b6eb70419 850 Gene3D G3DSA:3.40.228.10 192 405 1.1E-83 T 11-10-2018 Clos_1096 1c320ac30ef96f60f6614b9b6eb70419 850 Pfam PF01568 Molydopterin dinucleotide binding domain 749 839 6.1E-16 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Clos_1096 1c320ac30ef96f60f6614b9b6eb70419 850 SUPERFAMILY SSF50692 702 849 3.39E-25 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Clos_1096 1c320ac30ef96f60f6614b9b6eb70419 850 Gene3D G3DSA:2.20.25.90 43 104 1.9E-13 T 11-10-2018 Clos_1096 1c320ac30ef96f60f6614b9b6eb70419 850 SUPERFAMILY SSF53706 47 714 3.53E-128 T 11-10-2018 Clos_1096 1c320ac30ef96f60f6614b9b6eb70419 850 Pfam PF00384 Molybdopterin oxidoreductase 103 552 6.7E-37 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_1096 1c320ac30ef96f60f6614b9b6eb70419 850 Gene3D G3DSA:2.40.40.20 692 850 3.1E-26 T 11-10-2018 Clos_1096 1c320ac30ef96f60f6614b9b6eb70419 850 Gene3D G3DSA:3.40.50.740 105 568 1.1E-83 T 11-10-2018 Clos_2705 bb4a6cd8ccb3061b396254e494d152b3 330 Gene3D G3DSA:3.40.50.2300 51 300 1.9E-83 T 11-10-2018 Clos_2705 bb4a6cd8ccb3061b396254e494d152b3 330 SUPERFAMILY SSF53822 53 233 9.13E-12 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Clos_2705 bb4a6cd8ccb3061b396254e494d152b3 330 Pfam PF04392 ABC transporter substrate binding protein 41 328 1.0E-72 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein Clos_2705 bb4a6cd8ccb3061b396254e494d152b3 330 Gene3D G3DSA:3.40.50.2300 150 316 1.9E-83 T 11-10-2018 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 Gene3D G3DSA:3.40.50.300 1 279 1.5E-156 T 11-10-2018 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 2.9E-39 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 SUPERFAMILY SSF52540 1 302 2.11E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1364 806450bbe515c88360c16ed658ebf69f 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 364 44.27 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 2.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 85 103 2.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 42 2.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 3 23 2.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 2 364 4.8E-153 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 Gene3D G3DSA:1.10.150.300 111 197 1.5E-156 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 SUPERFAMILY SSF81271 280 361 9.16E-35 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 Gene3D G3DSA:3.10.20.30 46 362 1.5E-156 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Clos_1364 806450bbe515c88360c16ed658ebf69f 364 Pfam PF01926 50S ribosome-binding GTPase 3 120 6.6E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1364 806450bbe515c88360c16ed658ebf69f 364 PIRSF PIRSF006641 1 364 6.5E-157 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 SUPERFAMILY SSF52540 316 540 1.04E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 Pfam PF02374 Anion-transporting ATPase 14 294 1.0E-73 T 11-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 Pfam PF02374 Anion-transporting ATPase 328 468 2.7E-30 T 11-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 Gene3D G3DSA:3.40.50.300 12 298 9.2E-77 T 11-10-2018 Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 13 571 4.0E-255 T 11-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 SMART SM00382 13 232 0.9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 SMART SM00382 326 518 0.29 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 18 295 3.3E-73 T 11-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 Gene3D G3DSA:3.40.50.300 310 580 1.3E-62 T 11-10-2018 Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 PIRSF PIRSF001327 3 582 7.3E-269 T 11-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 Clos_1110 0ba1068ec398f9158765d5b12c7babbb 582 SUPERFAMILY SSF52540 15 295 5.34E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0506 a8bc8be228017f6177b014b71864ce8b 132 SUPERFAMILY SSF56047 3 132 1.44E-48 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0506 a8bc8be228017f6177b014b71864ce8b 132 Gene3D G3DSA:3.30.1490.10 75 132 1.1E-26 T 11-10-2018 Clos_0506 a8bc8be228017f6177b014b71864ce8b 132 Pfam PF00410 Ribosomal protein S8 5 132 2.7E-53 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0506 a8bc8be228017f6177b014b71864ce8b 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.195 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0506 a8bc8be228017f6177b014b71864ce8b 132 Gene3D G3DSA:3.30.1370.30 4 74 1.9E-32 T 11-10-2018 Clos_0506 a8bc8be228017f6177b014b71864ce8b 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 Pfam PF08264 Anticodon-binding domain of tRNA 394 526 3.0E-8 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 SUPERFAMILY SSF52374 3 349 3.75E-112 T 11-10-2018 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 512 3.7E-171 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 510 50.009 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 SUPERFAMILY SSF50249 553 653 4.9E-36 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 3 135 1.2E-14 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 Gene3D G3DSA:2.40.50.140 544 654 1.3E-38 T 11-10-2018 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 Gene3D G3DSA:2.170.220.10 117 227 2.2E-149 T 11-10-2018 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 8.7E-33 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 350 361 8.7E-33 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 8.7E-33 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 225 236 8.7E-33 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 8.7E-33 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 258 273 8.7E-33 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 Pfam PF01588 Putative tRNA binding domain 560 651 8.7E-30 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 SUPERFAMILY SSF47323 352 567 2.8E-45 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 528 653 1.4E-43 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 Pfam PF09334 tRNA synthetases class I (M) 149 362 8.1E-67 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 Gene3D G3DSA:1.10.730.10 340 523 2.3E-55 T 11-10-2018 Clos_2662 bb4ba695eb7761c2770fc84cbc687c68 654 Gene3D G3DSA:3.40.50.620 6 335 2.2E-149 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 331 434 2.5E-13 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 305 2.0E-64 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 SUPERFAMILY SSF55424 325 448 4.98E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 SUPERFAMILY SSF52821 436 543 2.36E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 SMART SM00450 453 549 2.6E-20 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 Gene3D G3DSA:3.40.250.10 452 548 6.2E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 2.4E-16 T 11-10-2018 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.4E-16 T 11-10-2018 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 2.4E-16 T 11-10-2018 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 2.4E-16 T 11-10-2018 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 Gene3D G3DSA:3.50.50.60 4 342 1.1E-187 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 2.4E-23 T 11-10-2018 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 2.4E-23 T 11-10-2018 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.4E-23 T 11-10-2018 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 2.4E-23 T 11-10-2018 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.4E-23 T 11-10-2018 Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 SUPERFAMILY SSF51905 1 321 2.88E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 Pfam PF00581 Rhodanese-like domain 463 543 2.5E-11 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_0895 b767caf73399de3a7f1dc8a8ec4d5808 575 Gene3D G3DSA:3.50.50.60 116 442 1.1E-187 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2775 c4a642a64c339fa63c592e52958fc82b 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 2.5E-59 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Clos_2775 c4a642a64c339fa63c592e52958fc82b 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 5.5E-56 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Clos_2775 c4a642a64c339fa63c592e52958fc82b 159 Gene3D G3DSA:3.40.1280.10 1 159 2.2E-65 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clos_2775 c4a642a64c339fa63c592e52958fc82b 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 31.394 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Clos_2775 c4a642a64c339fa63c592e52958fc82b 159 PIRSF PIRSF004505 1 159 1.4E-53 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Clos_2775 c4a642a64c339fa63c592e52958fc82b 159 SUPERFAMILY SSF75217 1 157 1.53E-59 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Clos_0080 fcebccd92cf444f113a180fe57791ede 792 SUPERFAMILY SSF52242 654 791 1.24E-39 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 Pfam PF02607 B12 binding domain 587 658 1.2E-15 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 Pfam PF00809 Pterin binding enzyme 316 538 1.0E-35 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 Gene3D G3DSA:1.10.1240.10 576 667 3.9E-17 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 SUPERFAMILY SSF82282 3 355 5.36E-109 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 Gene3D G3DSA:3.20.20.20 311 575 6.6E-98 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 PIRSF PIRSF037472 1 792 0.0 T 11-10-2018 IPR017215 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial Clos_0080 fcebccd92cf444f113a180fe57791ede 792 Pfam PF02310 B12 binding domain 674 779 2.3E-23 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 Pfam PF02574 Homocysteine S-methyltransferase 12 283 2.1E-59 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 Gene3D G3DSA:3.40.50.280 671 792 1.7E-44 T 11-10-2018 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 Gene3D G3DSA:3.20.20.330 1 295 7.5E-91 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 SUPERFAMILY SSF47644 587 664 8.24E-16 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 SUPERFAMILY SSF51717 314 570 1.7E-85 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_0080 fcebccd92cf444f113a180fe57791ede 792 SMART SM01018 584 666 5.1E-25 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_1286 39e9d051d970a47b8c9eea1302bd8a34 130 Pfam PF12844 Helix-turn-helix domain 4 66 4.0E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1286 39e9d051d970a47b8c9eea1302bd8a34 130 Gene3D G3DSA:1.10.260.40 3 127 5.1E-21 T 11-10-2018 Clos_1286 39e9d051d970a47b8c9eea1302bd8a34 130 SUPERFAMILY SSF47413 2 68 1.51E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1286 39e9d051d970a47b8c9eea1302bd8a34 130 SMART SM00530 6 61 1.4E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_0212 804d3b462fb7575d11842c4ac2b7e20f 283 SUPERFAMILY SSF159713 14 276 1.07E-62 T 11-10-2018 Clos_0212 804d3b462fb7575d11842c4ac2b7e20f 283 Pfam PF13938 Putative heavy-metal chelation 22 108 3.9E-16 T 11-10-2018 IPR025251 Domain of unknown function DUF4213 Clos_0212 804d3b462fb7575d11842c4ac2b7e20f 283 Gene3D G3DSA:3.40.50.11590 128 252 3.8E-25 T 11-10-2018 Clos_0212 804d3b462fb7575d11842c4ac2b7e20f 283 Pfam PF04016 Putative heavy-metal chelation 130 276 2.6E-44 T 11-10-2018 IPR007161 Putative heavy-metal chelation domain Clos_0252 965491437b824711c7457f37670dd96a 438 Gene3D G3DSA:3.30.590.20 2 418 3.1E-116 T 11-10-2018 Clos_0252 965491437b824711c7457f37670dd96a 438 PIRSF PIRSF017901 2 422 1.1E-87 T 11-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Clos_0252 965491437b824711c7457f37670dd96a 438 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 62 312 5.3E-33 T 11-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Clos_0252 965491437b824711c7457f37670dd96a 438 SUPERFAMILY SSF55931 19 415 4.02E-36 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Clos_0602 e7a5a8689f18a8b04282c7d1d4fa13ac 312 SUPERFAMILY SSF46955 7 52 8.42E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_0602 e7a5a8689f18a8b04282c7d1d4fa13ac 312 Gene3D G3DSA:1.10.1660.10 3 54 3.4E-9 T 11-10-2018 Clos_0602 e7a5a8689f18a8b04282c7d1d4fa13ac 312 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 53 1.7E-18 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Clos_0602 e7a5a8689f18a8b04282c7d1d4fa13ac 312 Pfam PF12728 Helix-turn-helix domain 7 54 8.0E-17 T 11-10-2018 Clos_0602 e7a5a8689f18a8b04282c7d1d4fa13ac 312 Gene3D G3DSA:3.40.190.10 165 265 5.0E-7 T 11-10-2018 Clos_0602 e7a5a8689f18a8b04282c7d1d4fa13ac 312 Pfam PF12727 PBP superfamily domain 104 285 4.3E-58 T 11-10-2018 IPR024370 PBP domain Clos_0602 e7a5a8689f18a8b04282c7d1d4fa13ac 312 SUPERFAMILY SSF53850 89 300 4.34E-17 T 11-10-2018 Clos_0455 d30e2101221fab1858efbfc5cc1d339c 340 ProSitePatterns PS00112 Phosphagen kinase active site signature. 158 164 - T 11-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 Clos_0455 d30e2101221fab1858efbfc5cc1d339c 340 SUPERFAMILY SSF55931 2 259 1.77E-82 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Clos_0455 d30e2101221fab1858efbfc5cc1d339c 340 Gene3D G3DSA:3.30.590.10 3 255 7.0E-71 T 11-10-2018 Clos_0455 d30e2101221fab1858efbfc5cc1d339c 340 Hamap MF_00602 Protein-arginine kinase [mcsB]. 3 340 35.535 T 11-10-2018 IPR023660 Protein arginine kinase GO:0016775 Clos_0455 d30e2101221fab1858efbfc5cc1d339c 340 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 47 244 5.5E-71 T 11-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 Clos_1586 32d738f5dd125a12024d194a3127030f 185 Gene3D G3DSA:1.10.10.10 83 177 1.5E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1586 32d738f5dd125a12024d194a3127030f 185 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 183 30.028 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Clos_1586 32d738f5dd125a12024d194a3127030f 185 SUPERFAMILY SSF46785 84 158 2.85E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1586 32d738f5dd125a12024d194a3127030f 185 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 166 6.5E-57 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Clos_1586 32d738f5dd125a12024d194a3127030f 185 Gene3D G3DSA:1.10.10.10 2 82 2.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1586 32d738f5dd125a12024d194a3127030f 185 PIRSF PIRSF019345 1 180 1.5E-56 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Clos_1586 32d738f5dd125a12024d194a3127030f 185 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 171 2.5E-50 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Clos_1586 32d738f5dd125a12024d194a3127030f 185 SUPERFAMILY SSF46785 1 80 8.16E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2005 e98c36ac0f27abec860d77386dfa6b97 66 SMART SM00357 3 66 6.9E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Clos_2005 e98c36ac0f27abec860d77386dfa6b97 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site Clos_2005 e98c36ac0f27abec860d77386dfa6b97 66 Gene3D G3DSA:2.40.50.140 1 65 2.6E-32 T 11-10-2018 Clos_2005 e98c36ac0f27abec860d77386dfa6b97 66 PIRSF PIRSF002599 1 66 1.5E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Clos_2005 e98c36ac0f27abec860d77386dfa6b97 66 PRINTS PR00050 Cold shock protein signature 24 33 1.8E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Clos_2005 e98c36ac0f27abec860d77386dfa6b97 66 PRINTS PR00050 Cold shock protein signature 4 19 1.8E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Clos_2005 e98c36ac0f27abec860d77386dfa6b97 66 PRINTS PR00050 Cold shock protein signature 39 57 1.8E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Clos_2005 e98c36ac0f27abec860d77386dfa6b97 66 SUPERFAMILY SSF50249 1 64 1.09E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_2005 e98c36ac0f27abec860d77386dfa6b97 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.9E-32 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Clos_2186 a62dc7c98e4d83cb6ed08f7e67bc638d 395 Pfam PF00742 Homoserine dehydrogenase 127 305 2.1E-54 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Clos_2186 a62dc7c98e4d83cb6ed08f7e67bc638d 395 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 173 195 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Clos_2186 a62dc7c98e4d83cb6ed08f7e67bc638d 395 SUPERFAMILY SSF51735 1 148 3.09E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_2186 a62dc7c98e4d83cb6ed08f7e67bc638d 395 PIRSF PIRSF000098 1 371 4.5E-113 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Clos_2186 a62dc7c98e4d83cb6ed08f7e67bc638d 395 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 8 119 1.2E-18 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Clos_2186 a62dc7c98e4d83cb6ed08f7e67bc638d 395 Gene3D G3DSA:3.30.70.260 329 347 3.1E-105 T 11-10-2018 Clos_2186 a62dc7c98e4d83cb6ed08f7e67bc638d 395 Gene3D G3DSA:3.30.360.10 126 328 3.1E-105 T 11-10-2018 Clos_2186 a62dc7c98e4d83cb6ed08f7e67bc638d 395 SUPERFAMILY SSF55347 127 292 1.5E-43 T 11-10-2018 Clos_2186 a62dc7c98e4d83cb6ed08f7e67bc638d 395 Gene3D G3DSA:3.40.50.720 2 324 3.1E-105 T 11-10-2018 Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 358 2.0E-26 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 SUPERFAMILY SSF103025 3 283 9.58E-107 T 11-10-2018 Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 363 1.2E-134 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 Gene3D G3DSA:4.10.1250.10 239 281 1.2E-20 T 11-10-2018 Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 261 9.1E-100 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 364 47.276 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 Gene3D G3DSA:3.30.1360.120 6 238 2.1E-98 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 Gene3D G3DSA:2.40.30.110 282 364 2.2E-28 T 11-10-2018 Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 PIRSF PIRSF006487 1 368 2.8E-110 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 SUPERFAMILY SSF101790 275 365 5.4E-24 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Clos_0065 f85e2b28348c3a2514f4ec644be84f9d 368 Gene3D G3DSA:3.30.70.1400 53 139 2.1E-98 T 11-10-2018 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 289 32.703 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 221 287 5.0E-14 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 Gene3D G3DSA:3.30.160.40 213 291 1.3E-12 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 Gene3D G3DSA:3.40.190.10 100 197 1.7E-71 T 11-10-2018 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 3 203 8.7E-69 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 224 240 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 SUPERFAMILY SSF53850 2 203 8.14E-67 T 11-10-2018 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 SUPERFAMILY SSF54782 213 289 2.22E-16 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 PRINTS PR00151 Porphobilinogen deaminase signature 42 62 3.4E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 PRINTS PR00151 Porphobilinogen deaminase signature 138 155 3.4E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 PRINTS PR00151 Porphobilinogen deaminase signature 119 136 3.4E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 PRINTS PR00151 Porphobilinogen deaminase signature 73 92 3.4E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 PRINTS PR00151 Porphobilinogen deaminase signature 223 240 3.4E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 Gene3D G3DSA:3.40.190.10 3 203 1.7E-71 T 11-10-2018 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 3 286 2.9E-89 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1327 ba5c5027bafbca15b29379987e0f0d88 296 PIRSF PIRSF001438 1 294 2.5E-95 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Clos_1157 2928283b46fd571e0f334a3127f3b672 163 Pfam PF14039 YusW-like protein 60 151 2.7E-20 T 11-10-2018 IPR025623 YusW-like protein Clos_2158 d3f2e569a650601021f8b4d1ad036906 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2158 d3f2e569a650601021f8b4d1ad036906 327 SMART SM00382 39 239 2.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2158 d3f2e569a650601021f8b4d1ad036906 327 SUPERFAMILY SSF52540 3 253 3.84E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2158 d3f2e569a650601021f8b4d1ad036906 327 Pfam PF00005 ABC transporter 31 181 3.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2158 d3f2e569a650601021f8b4d1ad036906 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 1.9E-26 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_2158 d3f2e569a650601021f8b4d1ad036906 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 298 7.5E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_2158 d3f2e569a650601021f8b4d1ad036906 327 Gene3D G3DSA:3.40.50.300 1 326 2.6E-94 T 11-10-2018 Clos_2392 1762afe0923cd6d263f0dee89db53040 86 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 81 4.6E-27 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Clos_2392 1762afe0923cd6d263f0dee89db53040 86 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 81 1.0E-19 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Clos_2392 1762afe0923cd6d263f0dee89db53040 86 SUPERFAMILY SSF159133 1 82 1.15E-25 T 11-10-2018 IPR036677 EutN/Ccml superfamily Clos_2392 1762afe0923cd6d263f0dee89db53040 86 Gene3D G3DSA:2.40.50.220 1 85 5.5E-28 T 11-10-2018 IPR036677 EutN/Ccml superfamily Clos_1176 1915a2dea2a76f2bc47060efd10e9180 143 Pfam PF03473 MOSC domain 36 141 3.3E-6 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Clos_1176 1915a2dea2a76f2bc47060efd10e9180 143 SUPERFAMILY SSF50800 1 142 9.94E-39 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Clos_1176 1915a2dea2a76f2bc47060efd10e9180 143 Gene3D G3DSA:2.40.33.20 1 143 2.1E-35 T 11-10-2018 Clos_0762 5c772ebde66b663cb1b563f0f3c5211e 408 SUPERFAMILY SSF50978 91 347 1.83E-9 T 11-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 Clos_2308 a27704e5191e931f33bac29265c879c1 412 SMART SM00422 1 68 2.3E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2308 a27704e5191e931f33bac29265c879c1 412 Gene3D G3DSA:3.40.50.150 134 359 1.2E-7 T 11-10-2018 Clos_2308 a27704e5191e931f33bac29265c879c1 412 Pfam PF13411 MerR HTH family regulatory protein 2 66 1.0E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2308 a27704e5191e931f33bac29265c879c1 412 SUPERFAMILY SSF46955 2 112 4.4E-14 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_2308 a27704e5191e931f33bac29265c879c1 412 SUPERFAMILY SSF53335 211 334 2.59E-9 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2308 a27704e5191e931f33bac29265c879c1 412 Gene3D G3DSA:1.10.1660.10 1 126 1.3E-18 T 11-10-2018 Clos_0359 875c6c88e34a4fba9c0ed0db8bd79a4b 352 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 324 2.1E-67 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Clos_0359 875c6c88e34a4fba9c0ed0db8bd79a4b 352 Gene3D G3DSA:3.20.20.70 2 349 9.5E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0359 875c6c88e34a4fba9c0ed0db8bd79a4b 352 SUPERFAMILY SSF51395 2 338 7.02E-99 T 11-10-2018 Clos_2552 86493a8d0504157a6767581aedc1b4cc 85 Pfam PF12116 Stage III sporulation protein D 2 81 4.1E-44 T 11-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID Clos_2552 86493a8d0504157a6767581aedc1b4cc 85 Gene3D G3DSA:1.10.10.60 1 85 5.7E-39 T 11-10-2018 Clos_2552 86493a8d0504157a6767581aedc1b4cc 85 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 80 5.1E-45 T 11-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID Clos_2552 86493a8d0504157a6767581aedc1b4cc 85 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Pfam PF14493 Helix-turn-helix domain 633 721 2.3E-25 T 11-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 SUPERFAMILY SSF47819 523 600 1.59E-25 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Pfam PF00570 HRDC domain 526 592 2.9E-19 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 SMART SM00341 522 602 1.3E-17 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Gene3D G3DSA:1.10.10.10 400 518 4.0E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 SUPERFAMILY SSF52540 7 339 4.33E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Gene3D G3DSA:3.40.50.300 1 200 7.3E-76 T 11-10-2018 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Pfam PF00270 DEAD/DEAH box helicase 19 182 7.8E-22 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Pfam PF00271 Helicase conserved C-terminal domain 214 322 4.8E-17 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 SMART SM00487 13 210 1.2E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 SMART SM00956 405 508 2.3E-44 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Pfam PF09382 RQC domain 401 512 1.7E-37 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 SMART SM00490 242 323 1.2E-22 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Pfam PF16124 RecQ zinc-binding 335 398 8.6E-15 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 457 3.4E-151 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Gene3D G3DSA:1.10.150.80 519 601 6.0E-25 T 11-10-2018 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 Gene3D G3DSA:3.40.50.300 202 399 3.2E-56 T 11-10-2018 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 595 1.4E-238 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Clos_0979 6444f0ca100dbfb83657ab17d9e09329 745 SUPERFAMILY SSF52540 200 446 1.35E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1201 1716c31eea975b35fe54e7315a3f30cf 397 Pfam PF02687 FtsX-like permease family 303 390 9.5E-14 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_1201 1716c31eea975b35fe54e7315a3f30cf 397 Pfam PF12704 MacB-like periplasmic core domain 20 237 7.7E-27 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Clos_0812 945a7b791024f79e4cedb96372ff9676 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 Gene3D G3DSA:1.10.8.60 314 380 8.3E-16 T 11-10-2018 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 Pfam PF00158 Sigma-54 interaction domain 144 309 6.8E-62 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 SMART SM00382 162 306 7.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0812 945a7b791024f79e4cedb96372ff9676 452 Gene3D G3DSA:3.40.50.300 130 313 7.6E-61 T 11-10-2018 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 SUPERFAMILY SSF52540 142 382 9.11E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0812 945a7b791024f79e4cedb96372ff9676 452 SUPERFAMILY SSF46689 357 448 3.58E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 SUPERFAMILY SSF55785 16 110 4.54E-7 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0812 945a7b791024f79e4cedb96372ff9676 452 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 9.0E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 449 9.0E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 4.8E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 Gene3D G3DSA:3.30.450.20 16 119 1.8E-13 T 11-10-2018 Clos_0812 945a7b791024f79e4cedb96372ff9676 452 Pfam PF13188 PAS domain 16 54 5.4E-4 T 11-10-2018 IPR000014 PAS domain Clos_0812 945a7b791024f79e4cedb96372ff9676 452 Gene3D G3DSA:1.10.10.60 381 448 3.0E-14 T 11-10-2018 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 202 218 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 372 388 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 186 196 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 249 266 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 231 244 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 Pfam PF01336 OB-fold nucleic acid binding domain 57 133 5.8E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 494 43.918 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 8 489 8.7E-205 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 SUPERFAMILY SSF55681 149 488 2.13E-119 T 11-10-2018 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 Gene3D G3DSA:3.30.930.10 145 495 2.2E-130 T 11-10-2018 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 SUPERFAMILY SSF50249 5 142 1.4E-37 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 Pfam PF00152 tRNA synthetases class II (D, K and N) 149 487 2.1E-81 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_0450 50dea9e04090bf221c4fae2cb80456ee 495 Gene3D G3DSA:2.40.50.140 8 142 2.2E-37 T 11-10-2018 Clos_2748 8a1a8275dbd818944470cb1a20123f9e 244 Gene3D G3DSA:2.60.120.10 6 78 1.8E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_2748 8a1a8275dbd818944470cb1a20123f9e 244 SUPERFAMILY SSF51215 16 66 1.1E-6 T 11-10-2018 IPR037923 Transcription regulator HTH-like Clos_2748 8a1a8275dbd818944470cb1a20123f9e 244 SUPERFAMILY SSF46689 139 183 1.57E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2748 8a1a8275dbd818944470cb1a20123f9e 244 Pfam PF02311 AraC-like ligand binding domain 11 66 3.8E-5 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Clos_2748 8a1a8275dbd818944470cb1a20123f9e 244 SMART SM00342 149 232 1.9E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2748 8a1a8275dbd818944470cb1a20123f9e 244 Gene3D G3DSA:1.10.10.60 183 240 1.2E-12 T 11-10-2018 Clos_2748 8a1a8275dbd818944470cb1a20123f9e 244 Pfam PF12833 Helix-turn-helix domain 156 233 1.1E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2748 8a1a8275dbd818944470cb1a20123f9e 244 SUPERFAMILY SSF46689 185 235 3.23E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2748 8a1a8275dbd818944470cb1a20123f9e 244 Gene3D G3DSA:1.10.10.60 137 182 1.0E-9 T 11-10-2018 Clos_1526 a6953c101e91c6b93e6aff25f07ad08e 89 SUPERFAMILY SSF64376 4 85 1.44E-27 T 11-10-2018 IPR035931 YlxR-like superfamily Clos_1526 a6953c101e91c6b93e6aff25f07ad08e 89 Gene3D G3DSA:3.30.1230.10 1 88 1.3E-34 T 11-10-2018 IPR035931 YlxR-like superfamily Clos_1526 a6953c101e91c6b93e6aff25f07ad08e 89 Pfam PF04296 Protein of unknown function (DUF448) 9 82 1.2E-29 T 11-10-2018 IPR007393 Domain of unknown function DUF448 Clos_0033 b67807510c3a1641b81b96ec4504544d 335 PIRSF PIRSF029792 1 335 2.6E-148 T 11-10-2018 IPR008794 Proline racemase family Clos_0033 b67807510c3a1641b81b96ec4504544d 335 Pfam PF05544 Proline racemase 10 333 8.5E-132 T 11-10-2018 IPR008794 Proline racemase family Clos_0033 b67807510c3a1641b81b96ec4504544d 335 Gene3D G3DSA:3.10.310.10 146 311 2.4E-137 T 11-10-2018 Clos_0033 b67807510c3a1641b81b96ec4504544d 335 Gene3D G3DSA:3.10.310.10 7 334 2.4E-137 T 11-10-2018 Clos_0033 b67807510c3a1641b81b96ec4504544d 335 SUPERFAMILY SSF54506 1 332 7.07E-112 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 405 1.4E-13 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 486 1.4E-13 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 508 526 1.4E-13 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 508 533 1.5E-9 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 592 606 1.5E-9 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 335 1.5E-9 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 471 480 1.5E-9 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 385 604 5.2E-29 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 Gene3D G3DSA:3.50.50.60 480 599 5.1E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 Gene3D G3DSA:3.20.20.70 2 382 1.5E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 SUPERFAMILY SSF51395 4 366 1.5E-92 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 333 4.1E-68 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 Gene3D G3DSA:3.40.50.720 385 637 5.1E-58 T 11-10-2018 Clos_2317 3ab7399a2d2f7094d2971897f42a676e 645 SUPERFAMILY SSF51905 361 604 2.33E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0878 d63bfe10e9aad3538f23144eea80cd04 177 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 59 67 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Clos_0878 d63bfe10e9aad3538f23144eea80cd04 177 Gene3D G3DSA:1.10.150.120 96 177 3.0E-33 T 11-10-2018 Clos_0878 d63bfe10e9aad3538f23144eea80cd04 177 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 27 79 9.2E-6 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Clos_0878 d63bfe10e9aad3538f23144eea80cd04 177 SUPERFAMILY SSF54292 21 98 1.3E-23 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Clos_0878 d63bfe10e9aad3538f23144eea80cd04 177 SUPERFAMILY SSF47741 104 172 1.31E-32 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Clos_0878 d63bfe10e9aad3538f23144eea80cd04 177 Gene3D G3DSA:3.10.20.30 13 95 3.1E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Clos_0878 d63bfe10e9aad3538f23144eea80cd04 177 Pfam PF01799 [2Fe-2S] binding domain 93 165 1.5E-30 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 SUPERFAMILY SSF52540 3 166 5.2E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 ProSitePatterns PS01128 Shikimate kinase signature. 58 83 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 Hamap MF_00109 Shikimate kinase [aroK]. 2 166 26.228 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 PRINTS PR01100 Shikimate kinase family signature 75 84 8.5E-20 T 11-10-2018 Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 PRINTS PR01100 Shikimate kinase family signature 5 20 8.5E-20 T 11-10-2018 Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 PRINTS PR01100 Shikimate kinase family signature 57 65 8.5E-20 T 11-10-2018 Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 PRINTS PR01100 Shikimate kinase family signature 29 42 8.5E-20 T 11-10-2018 Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 PRINTS PR01100 Shikimate kinase family signature 96 113 8.5E-20 T 11-10-2018 Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 Gene3D G3DSA:3.40.50.300 1 169 4.6E-50 T 11-10-2018 Clos_1625 bba5a8a9d1eff4429af91bdc02e39150 169 Pfam PF01202 Shikimate kinase 11 166 3.4E-41 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 329 5.3E-136 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 PRINTS PR00423 Cell division protein FtsZ signature 98 118 7.8E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 PRINTS PR00423 Cell division protein FtsZ signature 189 211 7.8E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 PRINTS PR00423 Cell division protein FtsZ signature 126 147 7.8E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 PRINTS PR00423 Cell division protein FtsZ signature 212 233 7.8E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 Gene3D G3DSA:3.40.50.1440 4 220 2.4E-81 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 SUPERFAMILY SSF52490 12 208 7.06E-71 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 SUPERFAMILY SSF55307 204 320 5.26E-47 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 SMART SM00865 207 324 4.1E-59 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 SMART SM00864 13 205 1.3E-114 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 Pfam PF12327 FtsZ family, C-terminal domain 222 316 1.4E-37 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 Gene3D G3DSA:3.30.1330.20 221 333 5.6E-42 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 3.5E-42 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Clos_1385 a84b2c962bc44cfe8db37f608456770b 368 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 359 39.514 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 Pfam PF00773 RNB domain 245 574 1.7E-117 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 SMART SM00955 245 575 1.8E-178 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 57 702 3.0E-219 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 SUPERFAMILY SSF50249 51 132 6.85E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 TIGRFAM TIGR02063 RNase_R: ribonuclease R 3 704 6.1E-274 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 SMART SM00357 69 130 3.6E-6 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 SMART SM00357 135 199 5.1E-5 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 SMART SM00316 132 196 38.0 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 SMART SM00316 622 704 3.3E-14 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 Pfam PF08206 Ribonuclease B OB domain 145 198 2.0E-11 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 Pfam PF08206 Ribonuclease B OB domain 70 129 4.8E-18 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 Pfam PF00575 S1 RNA binding domain 621 701 1.2E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 Gene3D G3DSA:2.40.50.140 625 705 8.8E-20 T 11-10-2018 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 SUPERFAMILY SSF50249 624 703 1.64E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 SUPERFAMILY SSF50249 206 621 2.68E-144 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 Gene3D G3DSA:2.40.50.140 52 131 1.3E-15 T 11-10-2018 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 Gene3D G3DSA:2.40.50.140 132 200 1.4E-11 T 11-10-2018 Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 SUPERFAMILY SSF50249 123 222 2.25E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0977 a143e010f44d21a88d68d2655bd8760b 705 Hamap MF_01895 Ribonuclease R [rnr]. 21 704 59.794 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Clos_1341 ccb561336187985f93e1a86f2cb91a8f 563 Gene3D G3DSA:3.40.190.10 60 544 3.4E-136 T 11-10-2018 Clos_1341 ccb561336187985f93e1a86f2cb91a8f 563 Gene3D G3DSA:3.10.105.10 305 530 3.4E-136 T 11-10-2018 Clos_1341 ccb561336187985f93e1a86f2cb91a8f 563 SUPERFAMILY SSF53850 44 552 1.99E-120 T 11-10-2018 Clos_1341 ccb561336187985f93e1a86f2cb91a8f 563 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 96 470 5.5E-84 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain Clos_1341 ccb561336187985f93e1a86f2cb91a8f 563 Gene3D G3DSA:3.90.76.10 79 214 3.4E-136 T 11-10-2018 Clos_1341 ccb561336187985f93e1a86f2cb91a8f 563 PIRSF PIRSF002741 1 559 7.7E-115 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 SMART SM00387 459 573 1.4E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 Pfam PF06580 Histidine kinase 369 448 2.5E-25 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 SUPERFAMILY SSF103190 102 178 4.32E-6 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 Pfam PF02743 Cache domain 41 267 7.0E-23 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 Gene3D G3DSA:3.30.450.20 76 172 1.4E-14 T 11-10-2018 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 SUPERFAMILY SSF55874 426 570 6.02E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 Gene3D G3DSA:3.30.565.10 439 575 6.1E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 SMART SM00304 305 357 9.3E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 Pfam PF00672 HAMP domain 306 352 1.2E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 571 9.2E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 Gene3D G3DSA:1.20.1480.50 269 362 1.2E-12 T 11-10-2018 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 570 4.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 4.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 548 4.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0179 466ec056b9bca7abdf95939c0fbe427a 580 SUPERFAMILY SSF158472 306 356 2.75E-9 T 11-10-2018 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 SUPERFAMILY SSF109604 3 189 1.37E-77 T 11-10-2018 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 SUPERFAMILY SSF81271 375 447 2.62E-23 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 SUPERFAMILY SSF55021 646 723 1.21E-13 T 11-10-2018 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 Pfam PF02824 TGS domain 388 447 4.6E-22 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 SUPERFAMILY SSF81301 179 392 4.41E-67 T 11-10-2018 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 Pfam PF13291 ACT domain 646 721 7.3E-23 T 11-10-2018 IPR002912 ACT domain Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 Gene3D G3DSA:1.10.3210.10 1 190 5.2E-84 T 11-10-2018 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 Gene3D G3DSA:3.30.460.10 192 323 2.3E-53 T 11-10-2018 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 Pfam PF13328 HD domain 25 174 3.4E-53 T 11-10-2018 IPR003607 HD/PDEase domain Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 Gene3D G3DSA:3.10.20.30 381 453 1.9E-33 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 25 721 1.7E-257 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 Pfam PF04607 Region found in RelA / SpoT proteins 234 343 1.8E-39 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 Gene3D G3DSA:3.30.70.260 645 724 2.0E-20 T 11-10-2018 Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 SMART SM00471 40 152 7.8E-9 T 11-10-2018 IPR003607 HD/PDEase domain Clos_1714 d15a189cf2ff37fc17ac77acbb081d36 724 SMART SM00954 234 344 1.0E-69 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 8.5E-77 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 8.5E-77 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 8.5E-77 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 339 360 8.5E-77 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 426 446 8.5E-77 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 304 311 8.5E-77 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 8.5E-77 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 8.5E-77 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 419 8.5E-77 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 7.3E-41 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 7.3E-41 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.3E-41 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 7.3E-41 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 7.3E-41 T 11-10-2018 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 462 5.6E-163 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 Gene3D G3DSA:3.30.390.30 342 462 8.7E-46 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 37 47 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 PIRSF PIRSF000350 1 459 2.3E-98 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 SUPERFAMILY SSF55424 339 463 2.41E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 451 6.2E-38 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 SUPERFAMILY SSF51905 2 333 1.3E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2147 2bcb175061349c629d8b719fc51e1144 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 324 2.8E-75 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_2147 2bcb175061349c629d8b719fc51e1144 467 Gene3D G3DSA:3.50.50.60 154 275 2.0E-113 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2147 2bcb175061349c629d8b719fc51e1144 467 Gene3D G3DSA:3.50.50.60 4 329 2.0E-113 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0084 94b5f066b4042e2480946a25dead8a88 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 SUPERFAMILY SSF53901 271 391 2.39E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 SUPERFAMILY SSF53901 4 270 1.93E-92 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 Gene3D G3DSA:3.40.47.10 126 390 2.8E-163 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 Gene3D G3DSA:3.40.47.10 6 276 2.8E-163 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 PIRSF PIRSF000429 1 392 2.3E-138 T 11-10-2018 IPR002155 Thiolase GO:0016747 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 Pfam PF02803 Thiolase, C-terminal domain 271 391 6.6E-53 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 Pfam PF00108 Thiolase, N-terminal domain 4 262 3.0E-108 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Clos_0084 94b5f066b4042e2480946a25dead8a88 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.2E-155 T 11-10-2018 IPR002155 Thiolase GO:0016747 Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 SUPERFAMILY SSF47781 461 549 6.34E-29 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 Gene3D G3DSA:3.30.420.140 315 442 7.0E-149 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 SUPERFAMILY SSF53098 312 460 2.35E-49 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 Pfam PF12836 Helix-hairpin-helix motif 482 546 7.0E-29 T 11-10-2018 Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 SUPERFAMILY SSF50249 630 717 2.39E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 Pfam PF09371 Tex-like protein N-terminal domain 9 193 5.6E-67 T 11-10-2018 IPR018974 Tex-like protein, N-terminal Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 SMART SM00732 316 415 2.1E-33 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 SMART SM00316 644 715 7.4E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 Pfam PF16921 Tex protein YqgF-like domain 317 442 5.5E-54 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 Gene3D G3DSA:2.40.50.140 628 718 1.7E-26 T 11-10-2018 Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 Pfam PF00575 S1 RNA binding domain 645 715 5.9E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 SUPERFAMILY SSF158832 4 311 6.8E-108 T 11-10-2018 Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 Gene3D G3DSA:1.10.150.310 490 625 2.0E-48 T 11-10-2018 Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 Gene3D G3DSA:1.10.3500.10 111 489 7.0E-149 T 11-10-2018 IPR023323 Tex-like domain superfamily Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 SUPERFAMILY SSF47781 551 627 4.61E-17 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_2477 9c27412b8b80b6e058b62e1154cd7b1a 718 Gene3D G3DSA:1.10.10.650 1 108 1.6E-37 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily Clos_1939 9eeb4545ad00555273c44c24f985b350 197 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 196 30.316 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Clos_1939 9eeb4545ad00555273c44c24f985b350 197 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 5 87 1.4E-19 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Clos_1939 9eeb4545ad00555273c44c24f985b350 197 Gene3D G3DSA:1.10.1050.10 6 196 5.6E-64 T 11-10-2018 Clos_1939 9eeb4545ad00555273c44c24f985b350 197 Pfam PF01479 S4 domain 89 135 4.7E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1939 9eeb4545ad00555273c44c24f985b350 197 Gene3D G3DSA:3.10.290.10 87 181 5.6E-64 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_1939 9eeb4545ad00555273c44c24f985b350 197 ProSitePatterns PS00632 Ribosomal protein S4 signature. 86 110 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1939 9eeb4545ad00555273c44c24f985b350 197 SMART SM01390 3 87 1.0E-31 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Clos_1939 9eeb4545ad00555273c44c24f985b350 197 SMART SM00363 88 148 3.3E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1939 9eeb4545ad00555273c44c24f985b350 197 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 196 1.7E-65 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Clos_1939 9eeb4545ad00555273c44c24f985b350 197 SUPERFAMILY SSF55174 2 196 1.23E-58 T 11-10-2018 Clos_1636 1b18c52478429aa79a0aad081c3a2771 400 Pfam PF00482 Type II secretion system (T2SS), protein F 269 391 2.0E-30 T 11-10-2018 IPR018076 Type II secretion system F domain Clos_1636 1b18c52478429aa79a0aad081c3a2771 400 Pfam PF00482 Type II secretion system (T2SS), protein F 66 189 2.8E-29 T 11-10-2018 IPR018076 Type II secretion system F domain Clos_1636 1b18c52478429aa79a0aad081c3a2771 400 Gene3D G3DSA:1.20.81.30 52 168 5.4E-33 T 11-10-2018 Clos_1636 1b18c52478429aa79a0aad081c3a2771 400 Gene3D G3DSA:1.20.81.30 252 363 1.3E-26 T 11-10-2018 Clos_1636 1b18c52478429aa79a0aad081c3a2771 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 364 378 6.9E-21 T 11-10-2018 IPR003004 GspF/PilC family Clos_1636 1b18c52478429aa79a0aad081c3a2771 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 399 6.9E-21 T 11-10-2018 IPR003004 GspF/PilC family Clos_1636 1b18c52478429aa79a0aad081c3a2771 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 62 74 6.9E-21 T 11-10-2018 IPR003004 GspF/PilC family Clos_1636 1b18c52478429aa79a0aad081c3a2771 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 161 189 6.9E-21 T 11-10-2018 IPR003004 GspF/PilC family Clos_2179 36a0708b798863367dc4ac2e0bedd12e 406 Gene3D G3DSA:3.40.50.360 248 402 2.0E-32 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_2179 36a0708b798863367dc4ac2e0bedd12e 406 PIRSF PIRSF005243 1 404 1.2E-121 T 11-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 Clos_2179 36a0708b798863367dc4ac2e0bedd12e 406 Gene3D G3DSA:3.60.15.10 1 242 1.2E-80 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_2179 36a0708b798863367dc4ac2e0bedd12e 406 SUPERFAMILY SSF52218 246 366 7.47E-31 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_2179 36a0708b798863367dc4ac2e0bedd12e 406 SMART SM00849 33 222 7.2E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_2179 36a0708b798863367dc4ac2e0bedd12e 406 SUPERFAMILY SSF56281 11 281 4.33E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_2179 36a0708b798863367dc4ac2e0bedd12e 406 Pfam PF00258 Flavodoxin 251 362 2.9E-12 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Clos_2179 36a0708b798863367dc4ac2e0bedd12e 406 ProSitePatterns PS00201 Flavodoxin signature. 251 267 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Clos_1340 ae9152e5947d35866d71f8440fdc8991 204 SUPERFAMILY SSF55811 25 196 4.06E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_1340 ae9152e5947d35866d71f8440fdc8991 204 Pfam PF00293 NUDIX domain 25 140 1.2E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_1340 ae9152e5947d35866d71f8440fdc8991 204 Gene3D G3DSA:3.90.79.10 7 202 1.3E-45 T 11-10-2018 Clos_1340 ae9152e5947d35866d71f8440fdc8991 204 ProSitePatterns PS00893 Nudix box signature. 61 82 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Clos_2176 a47c7e38675426e052b707ce7c826a37 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.3E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Clos_2176 a47c7e38675426e052b707ce7c826a37 66 PIRSF PIRSF002599 1 66 2.7E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Clos_2176 a47c7e38675426e052b707ce7c826a37 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site Clos_2176 a47c7e38675426e052b707ce7c826a37 66 PRINTS PR00050 Cold shock protein signature 4 19 6.4E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Clos_2176 a47c7e38675426e052b707ce7c826a37 66 PRINTS PR00050 Cold shock protein signature 24 33 6.4E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Clos_2176 a47c7e38675426e052b707ce7c826a37 66 PRINTS PR00050 Cold shock protein signature 39 57 6.4E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Clos_2176 a47c7e38675426e052b707ce7c826a37 66 SUPERFAMILY SSF50249 1 64 1.72E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_2176 a47c7e38675426e052b707ce7c826a37 66 SMART SM00357 3 66 1.0E-28 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Clos_2176 a47c7e38675426e052b707ce7c826a37 66 Gene3D G3DSA:2.40.50.140 1 65 4.2E-30 T 11-10-2018 Clos_2471 3b000c55b3471fe1103d64eee08f3aaf 322 Gene3D G3DSA:3.90.1010.20 190 320 1.3E-5 T 11-10-2018 Clos_2471 3b000c55b3471fe1103d64eee08f3aaf 322 Gene3D G3DSA:3.90.1010.20 69 189 1.1E-6 T 11-10-2018 Clos_0477 4523f5bfd3ab05d3897b9f2b9936940e 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.326 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0477 4523f5bfd3ab05d3897b9f2b9936940e 49 Pfam PF00471 Ribosomal protein L33 3 49 1.8E-22 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0477 4523f5bfd3ab05d3897b9f2b9936940e 49 Gene3D G3DSA:2.20.28.120 1 49 3.0E-23 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0477 4523f5bfd3ab05d3897b9f2b9936940e 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 2.1E-19 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0477 4523f5bfd3ab05d3897b9f2b9936940e 49 SUPERFAMILY SSF57829 2 49 1.4E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Clos_0477 4523f5bfd3ab05d3897b9f2b9936940e 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1330 468ddca582ea22a401fd31af98a6b792 424 Pfam PF00202 Aminotransferase class-III 33 415 6.0E-80 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Clos_1330 468ddca582ea22a401fd31af98a6b792 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Clos_1330 468ddca582ea22a401fd31af98a6b792 424 SUPERFAMILY SSF53383 2 421 1.63E-128 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1330 468ddca582ea22a401fd31af98a6b792 424 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 421 98.882 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Clos_1330 468ddca582ea22a401fd31af98a6b792 424 Gene3D G3DSA:3.40.640.10 69 317 1.7E-172 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1330 468ddca582ea22a401fd31af98a6b792 424 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 420 8.4E-181 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Clos_1330 468ddca582ea22a401fd31af98a6b792 424 Gene3D G3DSA:3.90.1150.10 8 413 1.7E-172 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_1749 52059a4188551a25112ab811989801ea 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 3.0E-22 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Clos_1749 52059a4188551a25112ab811989801ea 98 SMART SM01103 2 85 6.2E-37 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Clos_1749 52059a4188551a25112ab811989801ea 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 2.9E-21 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Clos_1749 52059a4188551a25112ab811989801ea 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 97 4.9E-23 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 Clos_1749 52059a4188551a25112ab811989801ea 98 Gene3D G3DSA:3.30.110.60 1 98 2.9E-33 T 11-10-2018 IPR035920 YhbY-like superfamily Clos_1749 52059a4188551a25112ab811989801ea 98 SUPERFAMILY SSF75471 1 95 2.88E-28 T 11-10-2018 IPR035920 YhbY-like superfamily Clos_1459 a90be588e09b4ea8a6ae45059b6c3ae4 342 Gene3D G3DSA:3.80.30.20 3 246 3.0E-30 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Clos_1459 a90be588e09b4ea8a6ae45059b6c3ae4 342 SUPERFAMILY SSF102114 10 269 6.02E-59 T 11-10-2018 Clos_1459 a90be588e09b4ea8a6ae45059b6c3ae4 342 Pfam PF04055 Radical SAM superfamily 12 181 2.6E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1459 a90be588e09b4ea8a6ae45059b6c3ae4 342 SMART SM00729 7 225 8.0E-48 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_1459 a90be588e09b4ea8a6ae45059b6c3ae4 342 Pfam PF16199 Radical_SAM C-terminal domain 186 272 2.8E-22 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Clos_0107 327648d2e57a1f5b155233e4b07dbbf0 268 Pfam PF13649 Methyltransferase domain 46 143 1.2E-16 T 11-10-2018 Clos_0107 327648d2e57a1f5b155233e4b07dbbf0 268 Gene3D G3DSA:3.40.50.150 2 268 2.5E-42 T 11-10-2018 Clos_0107 327648d2e57a1f5b155233e4b07dbbf0 268 SUPERFAMILY SSF53335 7 216 7.38E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 SUPERFAMILY SSF52335 2 194 3.01E-72 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 SMART SM00851 14 129 4.8E-56 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 512 43.267 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 512 8.8E-208 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 Gene3D G3DSA:3.40.140.20 205 361 8.7E-59 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 SMART SM00798 134 447 8.0E-177 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 445 1.3E-115 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 SUPERFAMILY SSF53927 208 512 1.0E-119 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 Gene3D G3DSA:3.40.50.1380 1 198 1.7E-89 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 Gene3D G3DSA:3.40.140.20 378 512 2.2E-53 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 Pfam PF02142 MGS-like domain 14 129 4.4E-27 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Clos_0541 9ced6cea30dc5dfc6450ee3074d67a5d 512 PIRSF PIRSF000414 1 512 4.3E-213 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Clos_1026 4049946c683dd310336768fdb63248e4 297 Gene3D G3DSA:3.40.190.290 91 294 2.9E-32 T 11-10-2018 Clos_1026 4049946c683dd310336768fdb63248e4 297 Gene3D G3DSA:1.10.10.10 1 69 8.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1026 4049946c683dd310336768fdb63248e4 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1026 4049946c683dd310336768fdb63248e4 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1026 4049946c683dd310336768fdb63248e4 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1026 4049946c683dd310336768fdb63248e4 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1026 4049946c683dd310336768fdb63248e4 297 Pfam PF03466 LysR substrate binding domain 93 287 1.2E-32 T 11-10-2018 IPR005119 LysR, substrate-binding Clos_1026 4049946c683dd310336768fdb63248e4 297 SUPERFAMILY SSF46785 6 84 1.45E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1026 4049946c683dd310336768fdb63248e4 297 SUPERFAMILY SSF53850 93 290 4.67E-29 T 11-10-2018 Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 Pfam PF01546 Peptidase family M20/M25/M40 72 367 8.8E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 366 2.7E-131 T 11-10-2018 IPR010162 Peptidase M20B, peptidase T-like Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 Pfam PF07687 Peptidase dimerisation domain 182 272 9.2E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 SUPERFAMILY SSF55031 178 289 2.22E-22 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 PIRSF PIRSF001123 4 105 1.2E-7 T 11-10-2018 IPR008007 Peptidase M42 Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 PIRSF PIRSF001123 279 371 2.4E-5 T 11-10-2018 IPR008007 Peptidase M42 Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 PIRSF PIRSF001123 96 180 7.5E-5 T 11-10-2018 IPR008007 Peptidase M42 Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 SUPERFAMILY SSF53187 5 367 7.6E-65 T 11-10-2018 Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 Gene3D G3DSA:3.30.70.360 176 287 1.9E-125 T 11-10-2018 Clos_2654 3af8f8ab4c5aac2cf54891ab49d30cb9 371 Gene3D G3DSA:3.40.630.10 14 362 1.9E-125 T 11-10-2018 Clos_1247 1179ede00f2351d8e820a0d7d713952d 713 Pfam PF07698 7TM receptor with intracellular HD hydrolase 284 466 1.1E-37 T 11-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain Clos_1247 1179ede00f2351d8e820a0d7d713952d 713 Gene3D G3DSA:1.10.3210.10 478 683 1.6E-18 T 11-10-2018 Clos_1247 1179ede00f2351d8e820a0d7d713952d 713 SUPERFAMILY SSF109604 490 688 2.23E-16 T 11-10-2018 Clos_1247 1179ede00f2351d8e820a0d7d713952d 713 Pfam PF01966 HD domain 491 634 6.3E-16 T 11-10-2018 IPR006674 HD domain Clos_1247 1179ede00f2351d8e820a0d7d713952d 713 SMART SM00471 487 644 6.4E-12 T 11-10-2018 IPR003607 HD/PDEase domain Clos_1247 1179ede00f2351d8e820a0d7d713952d 713 Pfam PF07697 7TM-HD extracellular 44 274 9.8E-37 T 11-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain Clos_1247 1179ede00f2351d8e820a0d7d713952d 713 TIGRFAM TIGR00277 HDIG: HDIG domain 488 587 2.3E-22 T 11-10-2018 IPR006675 HDIG domain Clos_2214 51e03a8be6623a87cce02a144e174c91 273 Gene3D G3DSA:3.20.20.70 1 249 2.0E-121 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2214 51e03a8be6623a87cce02a144e174c91 273 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 5 271 6.5E-134 T 11-10-2018 IPR009215 TIM-barrel domain, IGPS-like Clos_2214 51e03a8be6623a87cce02a144e174c91 273 SUPERFAMILY SSF51621 1 194 8.79E-84 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Clos_2214 51e03a8be6623a87cce02a144e174c91 273 PIRSF PIRSF034452 1 273 4.0E-146 T 11-10-2018 IPR009215 TIM-barrel domain, IGPS-like Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Pfam PF03144 Elongation factor Tu domain 2 318 385 3.5E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 SUPERFAMILY SSF54980 595 684 1.3E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 178 9.2E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Pfam PF14492 Elongation Factor G, domain II 398 471 1.3E-26 T 11-10-2018 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 SUPERFAMILY SSF50447 259 398 8.7E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Gene3D G3DSA:3.40.50.300 2 287 3.9E-83 T 11-10-2018 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 SUPERFAMILY SSF52540 5 276 3.88E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Pfam PF00009 Elongation factor Tu GTP binding domain 8 276 4.9E-44 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.6E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.6E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.6E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 PRINTS PR00315 GTP-binding elongation factor signature 57 65 1.6E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.6E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Gene3D G3DSA:2.40.30.10 288 405 2.8E-37 T 11-10-2018 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Pfam PF03764 Elongation factor G, domain IV 473 590 6.9E-42 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 SMART SM00889 474 590 9.4E-68 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 SUPERFAMILY SSF54211 476 591 3.29E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 SUPERFAMILY SSF54980 396 474 2.34E-20 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Pfam PF00679 Elongation factor G C-terminus 592 678 3.9E-30 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Gene3D G3DSA:3.30.70.870 406 475 1.2E-20 T 11-10-2018 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Gene3D G3DSA:3.30.70.240 596 667 4.4E-90 T 11-10-2018 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 TIGRFAM TIGR00484 EF-G: translation elongation factor G 6 683 1.1E-225 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 SMART SM00838 592 680 4.7E-46 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Clos_0453 f2762d7179b456be48896bc8ed6cb41f 688 Gene3D G3DSA:3.30.230.10 478 680 4.4E-90 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_0458 a73e535f8358be3b1ac9689b9bdcb620 358 SUPERFAMILY SSF143597 15 142 2.62E-30 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Clos_0458 a73e535f8358be3b1ac9689b9bdcb620 358 Gene3D G3DSA:3.40.1700.10 7 143 7.3E-56 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Clos_0458 a73e535f8358be3b1ac9689b9bdcb620 358 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 1 355 44.55 T 11-10-2018 IPR023763 DNA integrity scanning protein, DisA Clos_0458 a73e535f8358be3b1ac9689b9bdcb620 358 Gene3D G3DSA:1.20.1260.110 144 290 1.7E-47 T 11-10-2018 IPR038331 DisA, linker domain superfamily Clos_0458 a73e535f8358be3b1ac9689b9bdcb620 358 Gene3D G3DSA:1.10.150.20 291 353 9.0E-26 T 11-10-2018 Clos_0458 a73e535f8358be3b1ac9689b9bdcb620 358 Pfam PF10635 DisA bacterial checkpoint controller linker region 143 282 5.3E-55 T 11-10-2018 IPR018906 DNA integrity scanning, DisA, linker region Clos_0458 a73e535f8358be3b1ac9689b9bdcb620 358 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 26 137 1.2E-26 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Clos_0458 a73e535f8358be3b1ac9689b9bdcb620 358 SUPERFAMILY SSF47781 280 352 4.45E-12 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_1421 9b64dc9ac9cda63edf7ddbdd5c9fbed7 293 Pfam PF03755 YicC-like family, N-terminal region 2 156 8.0E-48 T 11-10-2018 IPR013527 YicC-like, N-terminal Clos_1421 9b64dc9ac9cda63edf7ddbdd5c9fbed7 293 Pfam PF08340 Domain of unknown function (DUF1732) 209 293 1.7E-37 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 Clos_1421 9b64dc9ac9cda63edf7ddbdd5c9fbed7 293 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 293 2.2E-83 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Clos_1180 205a148b1b5314389a09afa4d37d5a55 691 SUPERFAMILY SSF90123 21 438 7.98E-85 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1180 205a148b1b5314389a09afa4d37d5a55 691 Gene3D G3DSA:1.20.1560.10 5 82 5.4E-8 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1180 205a148b1b5314389a09afa4d37d5a55 691 Gene3D G3DSA:1.20.1560.10 156 434 1.0E-83 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1180 205a148b1b5314389a09afa4d37d5a55 691 Pfam PF00005 ABC transporter 467 616 3.5E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1180 205a148b1b5314389a09afa4d37d5a55 691 ProSitePatterns PS00211 ABC transporters family signature. 588 602 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1180 205a148b1b5314389a09afa4d37d5a55 691 SMART SM00382 476 661 2.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1180 205a148b1b5314389a09afa4d37d5a55 691 Gene3D G3DSA:3.40.50.300 447 690 3.3E-86 T 11-10-2018 Clos_1180 205a148b1b5314389a09afa4d37d5a55 691 Pfam PF00664 ABC transporter transmembrane region 170 404 3.5E-55 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_1180 205a148b1b5314389a09afa4d37d5a55 691 SUPERFAMILY SSF52540 440 687 2.0E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1230 7fa8525c3d9498174b3ce660779500d9 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 5 353 4.5E-107 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Clos_1230 7fa8525c3d9498174b3ce660779500d9 379 Pfam PF04055 Radical SAM superfamily 8 178 2.8E-23 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1230 7fa8525c3d9498174b3ce660779500d9 379 SMART SM00729 3 223 1.1E-59 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_1230 7fa8525c3d9498174b3ce660779500d9 379 Pfam PF06969 HemN C-terminal domain 302 366 1.4E-13 T 11-10-2018 IPR010723 HemN, C-terminal Clos_1230 7fa8525c3d9498174b3ce660779500d9 379 Gene3D G3DSA:3.80.30.20 1 301 1.4E-114 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Clos_1230 7fa8525c3d9498174b3ce660779500d9 379 SUPERFAMILY SSF102114 3 376 2.62E-122 T 11-10-2018 Clos_0240 67a4e6616836d78848b01f6534e63a8a 208 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 41 191 3.0E-39 T 11-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 Clos_0240 67a4e6616836d78848b01f6534e63a8a 208 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 43 198 8.7E-51 T 11-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 Clos_0240 67a4e6616836d78848b01f6534e63a8a 208 Gene3D G3DSA:1.10.1760.20 38 200 2.9E-50 T 11-10-2018 Clos_2842 cd6972740d043ea5df88c207e9317f6d 155 SUPERFAMILY SSF141694 3 86 4.97E-27 T 11-10-2018 Clos_2842 cd6972740d043ea5df88c207e9317f6d 155 Gene3D G3DSA:2.40.30.100 2 87 1.1E-33 T 11-10-2018 IPR037079 AF2212/PG0164-like superfamily Clos_2842 cd6972740d043ea5df88c207e9317f6d 155 Pfam PF08922 Domain of unknown function (DUF1905) 6 84 8.1E-24 T 11-10-2018 IPR015018 Protein of unknown function DUF1905 Clos_2842 cd6972740d043ea5df88c207e9317f6d 155 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 93 149 1.1E-18 T 11-10-2018 Clos_2093 1cb92258a523dff7780858edb3f80478 258 Pfam PF00005 ABC transporter 27 165 4.1E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2093 1cb92258a523dff7780858edb3f80478 258 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2093 1cb92258a523dff7780858edb3f80478 258 SMART SM00382 35 215 4.9E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2093 1cb92258a523dff7780858edb3f80478 258 Gene3D G3DSA:3.40.50.300 4 245 1.2E-65 T 11-10-2018 Clos_2093 1cb92258a523dff7780858edb3f80478 258 SUPERFAMILY SSF52540 7 218 1.82E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1950 284352485b3f3db63b2da4219116ac43 395 SUPERFAMILY SSF56281 9 282 6.29E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1950 284352485b3f3db63b2da4219116ac43 395 Gene3D G3DSA:3.60.15.10 2 245 4.3E-100 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1950 284352485b3f3db63b2da4219116ac43 395 PIRSF PIRSF005243 1 395 3.5E-155 T 11-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 Clos_1950 284352485b3f3db63b2da4219116ac43 395 Gene3D G3DSA:3.40.50.360 251 395 2.4E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_1950 284352485b3f3db63b2da4219116ac43 395 Pfam PF00258 Flavodoxin 255 385 1.6E-14 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Clos_1950 284352485b3f3db63b2da4219116ac43 395 SUPERFAMILY SSF52218 251 394 5.74E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_1950 284352485b3f3db63b2da4219116ac43 395 SMART SM00849 35 226 1.9E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_2752 e55c02971f30169dc3bd43fe8e48aef1 259 Pfam PF07739 TipAS antibiotic-recognition domain 140 249 1.1E-6 T 11-10-2018 IPR012925 TipAS antibiotic-recognition domain Clos_2752 e55c02971f30169dc3bd43fe8e48aef1 259 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 6.4E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2752 e55c02971f30169dc3bd43fe8e48aef1 259 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 6.4E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2752 e55c02971f30169dc3bd43fe8e48aef1 259 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 43 63 6.4E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2752 e55c02971f30169dc3bd43fe8e48aef1 259 Pfam PF13411 MerR HTH family regulatory protein 8 72 1.4E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2752 e55c02971f30169dc3bd43fe8e48aef1 259 SUPERFAMILY SSF46955 7 109 2.75E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_2752 e55c02971f30169dc3bd43fe8e48aef1 259 Gene3D G3DSA:1.10.1660.10 5 134 8.5E-29 T 11-10-2018 Clos_2752 e55c02971f30169dc3bd43fe8e48aef1 259 SMART SM00422 7 76 1.4E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2355 7252edeeff40e655a9d93a5caf269471 121 SUPERFAMILY SSF54593 4 120 1.65E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Clos_2355 7252edeeff40e655a9d93a5caf269471 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 117 2.0E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Clos_2355 7252edeeff40e655a9d93a5caf269471 121 Gene3D G3DSA:3.10.180.10 3 121 5.2E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Clos_2778 1cb3e12567a56e93166f4eff72275304 264 Pfam PF12706 Beta-lactamase superfamily domain 25 207 1.6E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_2778 1cb3e12567a56e93166f4eff72275304 264 SMART SM00849 13 218 1.8E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_2778 1cb3e12567a56e93166f4eff72275304 264 SUPERFAMILY SSF56281 1 246 6.81E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_2778 1cb3e12567a56e93166f4eff72275304 264 Gene3D G3DSA:3.60.15.10 3 250 2.8E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_0719 09547720747eaa892b5861d91ead8811 310 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 308 1.9E-114 T 11-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Clos_0719 09547720747eaa892b5861d91ead8811 310 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 2 306 6.1E-97 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Clos_0719 09547720747eaa892b5861d91ead8811 310 Gene3D G3DSA:3.20.20.70 1 310 1.9E-130 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0719 09547720747eaa892b5861d91ead8811 310 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 307 1.8E-106 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Clos_0719 09547720747eaa892b5861d91ead8811 310 SUPERFAMILY SSF51569 3 308 1.47E-110 T 11-10-2018 Clos_0719 09547720747eaa892b5861d91ead8811 310 PIRSF PIRSF001359 1 309 1.2E-107 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 312 385 7.2E-28 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SUPERFAMILY SSF52113 579 659 1.96E-16 T 11-10-2018 IPR036420 BRCT domain superfamily Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 PIRSF PIRSF001604 1 661 8.0E-219 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Pfam PF12826 Helix-hairpin-helix motif 499 560 1.0E-22 T 11-10-2018 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Gene3D G3DSA:1.10.150.20 494 572 4.8E-24 T 11-10-2018 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Gene3D G3DSA:1.10.287.610 3 68 1.1E-18 T 11-10-2018 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 640 3.4E-206 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SUPERFAMILY SSF50249 309 384 1.58E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Hamap MF_01588 DNA ligase [ligA]. 1 661 44.368 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SMART SM00532 2 436 9.6E-176 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 309 2.8E-95 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 579 638 6.8E-11 T 11-10-2018 IPR001357 BRCT domain Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Gene3D G3DSA:2.40.50.140 309 380 4.7E-28 T 11-10-2018 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SUPERFAMILY SSF56091 4 306 3.36E-99 T 11-10-2018 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SMART SM00278 434 453 4.9 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SMART SM00278 532 551 88.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SMART SM00278 500 519 110.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SMART SM00278 468 487 0.029 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Pfam PF14520 Helix-hairpin-helix domain 434 488 4.3E-4 T 11-10-2018 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SMART SM00292 580 661 1.1E-8 T 11-10-2018 IPR001357 BRCT domain Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 SUPERFAMILY SSF47781 394 570 1.37E-55 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Gene3D G3DSA:3.40.50.10190 573 661 8.7E-24 T 11-10-2018 IPR036420 BRCT domain superfamily Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Gene3D G3DSA:3.30.470.90 69 308 1.2E-77 T 11-10-2018 Clos_0550 7259750481cb11f7a1f5b3c9e2e6d7c6 661 Gene3D G3DSA:1.10.150.20 420 493 2.1E-23 T 11-10-2018 Clos_2219 28a993b1031bf1499b9c81cd090ae84e 143 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Clos_2219 28a993b1031bf1499b9c81cd090ae84e 143 Pfam PF00258 Flavodoxin 6 135 2.4E-16 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Clos_2219 28a993b1031bf1499b9c81cd090ae84e 143 Gene3D G3DSA:3.40.50.360 3 143 2.8E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_2219 28a993b1031bf1499b9c81cd090ae84e 143 SUPERFAMILY SSF52218 3 142 1.23E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_2219 28a993b1031bf1499b9c81cd090ae84e 143 TIGRFAM TIGR01753 flav_short: flavodoxin 5 141 4.4E-48 T 11-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 Clos_0682 7065a9de1968c9adc1b057c828e9a049 338 Pfam PF12833 Helix-turn-helix domain 252 329 4.6E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0682 7065a9de1968c9adc1b057c828e9a049 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 1.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_0682 7065a9de1968c9adc1b057c828e9a049 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 1.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_0682 7065a9de1968c9adc1b057c828e9a049 338 SUPERFAMILY SSF46689 281 329 1.79E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0682 7065a9de1968c9adc1b057c828e9a049 338 SUPERFAMILY SSF46689 230 279 5.11E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0682 7065a9de1968c9adc1b057c828e9a049 338 Gene3D G3DSA:1.10.10.60 224 333 1.9E-26 T 11-10-2018 Clos_0682 7065a9de1968c9adc1b057c828e9a049 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 282 324 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_0682 7065a9de1968c9adc1b057c828e9a049 338 SMART SM00342 245 328 1.5E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_1344 314f185371c562b19caed10fd88bd5b1 327 SMART SM00382 33 233 1.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1344 314f185371c562b19caed10fd88bd5b1 327 SUPERFAMILY SSF52540 4 253 2.01E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1344 314f185371c562b19caed10fd88bd5b1 327 Gene3D G3DSA:3.40.50.300 1 327 1.4E-103 T 11-10-2018 Clos_1344 314f185371c562b19caed10fd88bd5b1 327 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1344 314f185371c562b19caed10fd88bd5b1 327 Pfam PF00005 ABC transporter 25 183 1.5E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1344 314f185371c562b19caed10fd88bd5b1 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 3.7E-28 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_1344 314f185371c562b19caed10fd88bd5b1 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 3.6E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_2549 1446b8335e8026fe05afcab39f9a52c8 264 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 262 1.6E-85 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Clos_2549 1446b8335e8026fe05afcab39f9a52c8 264 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 243 2.3E-53 T 11-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Clos_2549 1446b8335e8026fe05afcab39f9a52c8 264 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Clos_2549 1446b8335e8026fe05afcab39f9a52c8 264 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 186 262 9.1E-23 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clos_2549 1446b8335e8026fe05afcab39f9a52c8 264 SUPERFAMILY SSF117143 89 224 8.11E-32 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clos_2549 1446b8335e8026fe05afcab39f9a52c8 264 Pfam PF00460 Flagella basal body rod protein 4 34 1.2E-14 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Clos_2549 1446b8335e8026fe05afcab39f9a52c8 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 137 4.2E-48 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clos_2549 1446b8335e8026fe05afcab39f9a52c8 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 245 2.2E-28 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clos_1322 a7bfe41a9a40261aa7ec02949ea43671 363 Pfam PF00899 ThiF family 119 332 8.5E-43 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Clos_1322 a7bfe41a9a40261aa7ec02949ea43671 363 Gene3D G3DSA:3.40.50.720 96 359 5.4E-64 T 11-10-2018 Clos_1322 a7bfe41a9a40261aa7ec02949ea43671 363 SUPERFAMILY SSF69572 91 358 3.66E-58 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Gene3D G3DSA:3.30.56.10 5 187 1.3E-71 T 11-10-2018 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 SUPERFAMILY SSF56037 207 404 1.57E-72 T 11-10-2018 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 SUPERFAMILY SSF46955 410 482 6.04E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 SUPERFAMILY SSF55681 474 690 1.66E-46 T 11-10-2018 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Pfam PF03484 tRNA synthetase B5 domain 414 478 2.7E-17 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 SMART SM00896 704 797 2.5E-45 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Gene3D G3DSA:3.30.70.380 705 798 1.6E-31 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 SUPERFAMILY SSF50249 36 198 7.59E-46 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Gene3D G3DSA:3.50.40.10 198 407 1.2E-86 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Gene3D G3DSA:2.40.50.140 40 160 1.3E-71 T 11-10-2018 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 SMART SM00874 410 478 1.3E-20 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 2 791 43.677 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Pfam PF01588 Putative tRNA binding domain 46 151 6.5E-20 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Pfam PF03483 B3/4 domain 220 391 1.4E-69 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 2 797 3.4E-269 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 SMART SM00873 220 393 6.4E-88 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Gene3D G3DSA:3.30.930.10 495 690 7.1E-61 T 11-10-2018 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Gene3D G3DSA:3.30.56.10 410 483 4.7E-21 T 11-10-2018 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 Pfam PF03147 Ferredoxin-fold anticodon binding domain 704 797 2.4E-30 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Clos_1971 776c55ee4e2eea5e3ed933d213010421 798 SUPERFAMILY SSF54991 699 797 1.03E-31 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Clos_1490 2016d764c8d211b498d6676a19e56627 261 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 217 3.7E-25 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Clos_1490 2016d764c8d211b498d6676a19e56627 261 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 Pfam PF13424 Tetratricopeptide repeat 266 323 1.3E-9 T 11-10-2018 Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 SMART SM00028 328 361 0.0013 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 SMART SM00028 294 327 5.0E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 SMART SM00028 260 293 4.1E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 SMART SM00028 178 211 23.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 SUPERFAMILY SSF48452 160 290 6.6E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 Gene3D G3DSA:1.25.40.10 227 377 3.3E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 SUPERFAMILY SSF48452 257 365 3.52E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 Gene3D G3DSA:1.25.40.10 80 226 8.8E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1829 99ae057f2b12a20a994883cfffdea23c 379 Pfam PF07719 Tetratricopeptide repeat 329 361 3.0E-5 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 Clos_2133 c0f679464b80e57fb1cdd0bb78f5b8ee 133 Pfam PF07784 Protein of unknown function (DUF1622) 29 101 4.1E-17 T 11-10-2018 IPR012427 Protein of unknown function DUF1622 Clos_0088 b7cbcfd9686550b96dcbc41428fa8b7d 280 SUPERFAMILY SSF51735 2 181 8.86E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0088 b7cbcfd9686550b96dcbc41428fa8b7d 280 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 280 1.2E-33 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Clos_0088 b7cbcfd9686550b96dcbc41428fa8b7d 280 SUPERFAMILY SSF48179 183 280 2.13E-31 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Clos_0088 b7cbcfd9686550b96dcbc41428fa8b7d 280 PIRSF PIRSF000105 1 280 5.7E-89 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Clos_0088 b7cbcfd9686550b96dcbc41428fa8b7d 280 Gene3D G3DSA:3.40.50.720 1 187 4.7E-72 T 11-10-2018 Clos_0088 b7cbcfd9686550b96dcbc41428fa8b7d 280 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 181 6.7E-66 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Clos_0088 b7cbcfd9686550b96dcbc41428fa8b7d 280 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 181 205 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Clos_0088 b7cbcfd9686550b96dcbc41428fa8b7d 280 Gene3D G3DSA:1.10.1040.10 191 276 9.1E-33 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Clos_2494 3a8c8c543cdb7dea2c65651e043fb373 74 Gene3D G3DSA:3.30.70.1680 1 62 8.8E-26 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Clos_2494 3a8c8c543cdb7dea2c65651e043fb373 74 Pfam PF02599 Global regulator protein family 1 53 2.9E-24 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Clos_2494 3a8c8c543cdb7dea2c65651e043fb373 74 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 68 17.728 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Clos_2494 3a8c8c543cdb7dea2c65651e043fb373 74 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 38 2.0E-11 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Clos_2494 3a8c8c543cdb7dea2c65651e043fb373 74 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 62 2.5E-25 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Clos_2494 3a8c8c543cdb7dea2c65651e043fb373 74 SUPERFAMILY SSF117130 1 55 1.96E-19 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Clos_0377 efe9a9c79948acaffb3d670a4aaff5b8 418 SUPERFAMILY SSF56003 117 413 4.06E-89 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Clos_0377 efe9a9c79948acaffb3d670a4aaff5b8 418 SMART SM01008 21 125 8.3E-36 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Clos_0377 efe9a9c79948acaffb3d670a4aaff5b8 418 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 142 412 1.2E-85 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Clos_0377 efe9a9c79948acaffb3d670a4aaff5b8 418 SUPERFAMILY SSF54665 3 143 5.36E-38 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Clos_0377 efe9a9c79948acaffb3d670a4aaff5b8 418 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 22 124 1.4E-29 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Clos_0377 efe9a9c79948acaffb3d670a4aaff5b8 418 Gene3D G3DSA:3.30.365.10 1 416 4.3E-139 T 11-10-2018 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 245 257 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 70 268 1.5E-87 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 Pfam PF00813 FliP family 70 264 1.7E-83 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 197 212 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 258 268 6.4E-21 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 152 6.4E-21 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 166 178 6.4E-21 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 190 202 6.4E-21 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 66 75 6.4E-21 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 138 6.4E-21 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 68 87 3.3E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 239 3.3E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 242 267 3.3E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 107 3.3E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 197 217 3.3E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Clos_1497 e92dd1715be29f452fbfa3f166057a3b 269 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 107 126 3.3E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Clos_2686 67c7dc7a73552d5bab5e1c504cfab3f8 180 Gene3D G3DSA:1.20.120.1760 2 167 7.7E-16 T 11-10-2018 Clos_2686 67c7dc7a73552d5bab5e1c504cfab3f8 180 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Clos_2686 67c7dc7a73552d5bab5e1c504cfab3f8 180 PIRSF PIRSF000847 3 173 1.7E-24 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Clos_2686 67c7dc7a73552d5bab5e1c504cfab3f8 180 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 69 4.2E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Clos_0149 5d1b2f7be36ebee77403f59d3531d3fe 330 Gene3D G3DSA:3.40.50.300 65 328 1.0E-27 T 11-10-2018 Clos_0149 5d1b2f7be36ebee77403f59d3531d3fe 330 Pfam PF00005 ABC transporter 100 246 5.8E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0149 5d1b2f7be36ebee77403f59d3531d3fe 330 SUPERFAMILY SSF52540 80 294 2.66E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0149 5d1b2f7be36ebee77403f59d3531d3fe 330 SMART SM00382 105 290 7.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0149 5d1b2f7be36ebee77403f59d3531d3fe 330 ProSitePatterns PS00211 ABC transporters family signature. 219 233 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0544 b401628027728281a695aec7ad8941c0 283 Gene3D G3DSA:3.40.190.10 129 233 6.9E-102 T 11-10-2018 Clos_0544 b401628027728281a695aec7ad8941c0 283 Gene3D G3DSA:3.40.190.10 48 280 6.9E-102 T 11-10-2018 Clos_0544 b401628027728281a695aec7ad8941c0 283 Pfam PF03180 NLPA lipoprotein 48 283 4.1E-96 T 11-10-2018 IPR004872 Lipoprotein NlpA family Clos_0544 b401628027728281a695aec7ad8941c0 283 SUPERFAMILY SSF53850 48 283 4.02E-87 T 11-10-2018 Clos_0544 b401628027728281a695aec7ad8941c0 283 PIRSF PIRSF002854 1 283 5.0E-109 T 11-10-2018 IPR004872 Lipoprotein NlpA family Clos_0595 e630d026c4aa95152c774990f0188317 277 SUPERFAMILY SSF53098 119 271 2.73E-32 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_0595 e630d026c4aa95152c774990f0188317 277 Gene3D G3DSA:3.30.420.10 119 275 1.7E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_0595 e630d026c4aa95152c774990f0188317 277 Pfam PF00665 Integrase core domain 120 228 8.3E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Clos_0595 e630d026c4aa95152c774990f0188317 277 Pfam PF13276 HTH-like domain 35 87 4.2E-16 T 11-10-2018 IPR025948 HTH-like domain Clos_2865 ccb7ae23e7e3c9b0dcb24da0adc5eb50 182 Pfam PF14584 Protein of unknown function (DUF4446) 15 162 2.7E-49 T 11-10-2018 IPR027981 Protein of unknown function DUF4446 Clos_1746 74f24d271d0d94d8c3556d0c4b62f914 316 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 78 228 3.0E-47 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Clos_1746 74f24d271d0d94d8c3556d0c4b62f914 316 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 78 229 1.2E-45 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Clos_1746 74f24d271d0d94d8c3556d0c4b62f914 316 Gene3D G3DSA:1.10.260.150 46 315 6.7E-88 T 11-10-2018 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 471 5.4E-167 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 806 25.342 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Clos_0007 51818b6fd6a524408a0112b653efb733 819 SUPERFAMILY SSF101904 498 815 3.14E-111 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Clos_0007 51818b6fd6a524408a0112b653efb733 819 SUPERFAMILY SSF56719 30 486 1.7E-186 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Gene3D G3DSA:1.10.268.10 369 458 9.9E-223 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Gene3D G3DSA:2.120.10.90 495 804 5.9E-129 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Clos_0007 51818b6fd6a524408a0112b653efb733 819 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 804 0.0 T 11-10-2018 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Gene3D G3DSA:3.90.199.10 32 485 9.9E-223 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Clos_0007 51818b6fd6a524408a0112b653efb733 819 SMART SM00434 11 464 1.3E-295 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 802 2.3E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 658 703 2.1E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 553 602 6.8E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 708 754 2.9E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 505 547 3.1E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 610 653 1.3E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Clos_0007 51818b6fd6a524408a0112b653efb733 819 Gene3D G3DSA:3.30.1360.40 236 332 9.9E-223 T 11-10-2018 Clos_0943 0cd794ce7acba93399621fa3e787f2ba 227 Gene3D G3DSA:1.10.10.10 129 227 8.0E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0943 0cd794ce7acba93399621fa3e787f2ba 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 224 2.4E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0943 0cd794ce7acba93399621fa3e787f2ba 227 SMART SM00448 4 114 8.9E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0943 0cd794ce7acba93399621fa3e787f2ba 227 SMART SM00862 148 224 1.5E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0943 0cd794ce7acba93399621fa3e787f2ba 227 Gene3D G3DSA:3.40.50.2300 1 128 1.3E-40 T 11-10-2018 Clos_0943 0cd794ce7acba93399621fa3e787f2ba 227 SUPERFAMILY SSF52172 1 179 1.34E-43 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0943 0cd794ce7acba93399621fa3e787f2ba 227 Pfam PF00072 Response regulator receiver domain 6 115 1.2E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 Gene3D G3DSA:3.40.1190.10 99 312 1.7E-62 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 SUPERFAMILY SSF53244 312 452 2.47E-41 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 Gene3D G3DSA:3.40.50.720 6 92 5.7E-23 T 11-10-2018 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 Gene3D G3DSA:3.90.190.20 318 454 3.2E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 6 452 35.519 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 371 5.2E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 Pfam PF08245 Mur ligase middle domain 115 292 1.7E-38 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 7 450 5.5E-132 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 SUPERFAMILY SSF53623 101 310 2.22E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_1377 c69b8ee97db13dfab0b6ffd5f4ddb3f9 454 SUPERFAMILY SSF51984 2 99 2.35E-14 T 11-10-2018 Clos_1554 03021f19847c5924e39da5e8cca35243 874 SMART SM00533 286 594 7.8E-101 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 Pfam PF01624 MutS domain I 1 110 3.5E-45 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Clos_1554 03021f19847c5924e39da5e8cca35243 874 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 869 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 SUPERFAMILY SSF52540 570 803 5.72E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1554 03021f19847c5924e39da5e8cca35243 874 Gene3D G3DSA:1.10.1420.10 268 563 2.6E-108 T 11-10-2018 Clos_1554 03021f19847c5924e39da5e8cca35243 874 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 693 709 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 SUPERFAMILY SSF55271 1 106 2.09E-41 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Clos_1554 03021f19847c5924e39da5e8cca35243 874 SUPERFAMILY SSF48334 269 569 4.97E-94 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clos_1554 03021f19847c5924e39da5e8cca35243 874 Pfam PF05190 MutS family domain IV 431 521 1.8E-30 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 SUPERFAMILY SSF53150 105 268 4.05E-36 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 SMART SM00534 612 799 9.3E-115 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 863 25.495 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 Pfam PF05188 MutS domain II 119 254 9.1E-18 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 Gene3D G3DSA:3.30.420.110 118 262 4.7E-31 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 Pfam PF00488 MutS domain V 616 802 1.1E-83 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 Gene3D G3DSA:1.10.1420.10 403 538 2.6E-108 T 11-10-2018 Clos_1554 03021f19847c5924e39da5e8cca35243 874 PIRSF PIRSF037677 1 854 1.7E-180 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 Pfam PF05192 MutS domain III 271 562 1.0E-43 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Clos_1554 03021f19847c5924e39da5e8cca35243 874 Gene3D G3DSA:3.40.50.300 571 874 2.4E-105 T 11-10-2018 Clos_1554 03021f19847c5924e39da5e8cca35243 874 Gene3D G3DSA:3.40.1170.10 1 112 2.1E-47 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 Gene3D G3DSA:3.40.50.1370 133 292 2.3E-110 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 5 307 36.266 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 SUPERFAMILY SSF53671 2 308 2.36E-102 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 225 234 5.9E-37 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 5.9E-37 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 5.9E-37 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 132 149 5.9E-37 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 78 87 5.9E-37 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 5.9E-37 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 304 1.1E-33 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 305 7.2E-107 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 145 5.7E-47 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 1.9E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.9E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.9E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.9E-24 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Clos_2188 6571f6bb643a46fe824d5c48bc4377fb 331 Gene3D G3DSA:3.40.50.1370 6 303 2.3E-110 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 SUPERFAMILY SSF52922 259 414 6.44E-49 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 958 1071 7.9E-10 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 SMART SM00890 622 679 3.5E-31 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 SUPERFAMILY SSF52518 4 258 1.35E-78 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Gene3D G3DSA:3.30.70.20 669 785 1.4E-43 T 11-10-2018 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 SUPERFAMILY SSF52518 788 1175 1.18E-132 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 369 2.2E-16 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 6 1172 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 SUPERFAMILY SSF53323 415 668 1.02E-90 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 5.6E-35 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 PIRSF PIRSF000159 1 1176 0.0 T 11-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 18 247 3.2E-80 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Pfam PF13484 4Fe-4S double cluster binding domain 688 757 5.3E-9 T 11-10-2018 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Pfam PF10371 Domain of unknown function 628 678 8.2E-25 T 11-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Gene3D G3DSA:3.40.50.970 2 258 9.8E-111 T 11-10-2018 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Gene3D G3DSA:3.40.50.970 787 1174 1.4E-170 T 11-10-2018 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Gene3D G3DSA:4.10.780.10 629 668 2.0E-5 T 11-10-2018 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 SUPERFAMILY SSF54862 665 832 8.79E-21 T 11-10-2018 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Gene3D G3DSA:3.40.50.920 259 413 9.8E-61 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_1953 216bbab4b039662635b68afcad6ac6cf 1176 Gene3D G3DSA:3.40.920.10 415 625 4.0E-95 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 SUPERFAMILY SSF55257 7 228 2.94E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 Gene3D G3DSA:1.10.150.20 239 316 7.5E-34 T 11-10-2018 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 SUPERFAMILY SSF47789 249 313 8.89E-25 T 11-10-2018 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 242 307 2.0E-29 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 313 3.4E-123 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 SUPERFAMILY SSF56553 52 173 9.29E-45 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 SMART SM00662 22 229 8.5E-98 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 315 37.612 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 316 2.0E-23 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 28 223 2.5E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 Gene3D G3DSA:2.170.120.12 52 172 5.9E-90 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 154 9.4E-24 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_0521 4051a2ab948103717bcde2d8d437f22d 317 Gene3D G3DSA:3.30.1360.10 18 223 5.9E-90 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_2844 871ee08e4a392cf8e3ea290c7de1ac93 153 Gene3D G3DSA:3.40.630.30 1 153 1.3E-45 T 11-10-2018 Clos_2844 871ee08e4a392cf8e3ea290c7de1ac93 153 SUPERFAMILY SSF55729 17 150 2.23E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2844 871ee08e4a392cf8e3ea290c7de1ac93 153 Pfam PF13673 Acetyltransferase (GNAT) domain 28 122 3.2E-12 T 11-10-2018 IPR000182 GNAT domain Clos_1975 17d171e05b7149c54fe698f1ce21e353 449 Pfam PF02386 Cation transport protein 37 429 1.7E-64 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Clos_1975 17d171e05b7149c54fe698f1ce21e353 449 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 30 418 2.2E-115 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 SUPERFAMILY SSF47413 2 59 1.91E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 SMART SM00354 1 71 2.9E-29 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 Gene3D G3DSA:3.40.50.2300 61 306 4.5E-85 T 11-10-2018 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 Pfam PF13377 Periplasmic binding protein-like domain 168 332 2.3E-33 T 11-10-2018 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.8E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.2E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.2E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 SUPERFAMILY SSF53822 61 334 2.94E-86 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 Gene3D G3DSA:1.10.260.40 2 59 7.1E-20 T 11-10-2018 Clos_2456 ca2bcfbd54dbc8ad2c02f285e27f7c63 343 Gene3D G3DSA:3.40.50.2300 160 289 4.5E-85 T 11-10-2018 Clos_0270 cc41cfa4ad5327ebe2af5992c38f1a94 216 Gene3D G3DSA:1.20.58.220 1 109 3.1E-38 T 11-10-2018 IPR038078 PhoU-like domain superfamily Clos_0270 cc41cfa4ad5327ebe2af5992c38f1a94 216 PIRSF PIRSF003107 1 216 5.0E-73 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Clos_0270 cc41cfa4ad5327ebe2af5992c38f1a94 216 Gene3D G3DSA:1.20.58.220 110 216 5.4E-40 T 11-10-2018 IPR038078 PhoU-like domain superfamily Clos_0270 cc41cfa4ad5327ebe2af5992c38f1a94 216 Pfam PF01895 PhoU domain 17 103 4.6E-26 T 11-10-2018 IPR026022 PhoU domain Clos_0270 cc41cfa4ad5327ebe2af5992c38f1a94 216 Pfam PF01895 PhoU domain 119 204 8.2E-20 T 11-10-2018 IPR026022 PhoU domain Clos_0270 cc41cfa4ad5327ebe2af5992c38f1a94 216 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 213 2.5E-67 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Clos_0270 cc41cfa4ad5327ebe2af5992c38f1a94 216 SUPERFAMILY SSF109755 2 215 3.87E-72 T 11-10-2018 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 587 3.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 550 568 3.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 533 3.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 547 3.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 Gene3D G3DSA:3.40.190.10 85 179 1.1E-39 T 11-10-2018 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 SUPERFAMILY SSF53850 1 220 2.1E-42 T 11-10-2018 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 SUPERFAMILY SSF55874 431 588 5.89E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 Gene3D G3DSA:3.30.565.10 439 594 8.8E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 SUPERFAMILY SSF47384 369 441 1.73E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 587 5.5E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 SMART SM00062 1 221 7.7E-24 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 376 438 1.8E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 Gene3D G3DSA:3.40.190.10 2 217 1.1E-39 T 11-10-2018 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 Gene3D G3DSA:1.10.287.130 354 436 2.4E-19 T 11-10-2018 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 SMART SM00388 374 441 2.1E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 1 219 2.2E-36 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_0748 b9a17dd38fa1c46c07fb5f1e39884689 597 SMART SM00387 482 590 6.3E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 SUPERFAMILY SSF102114 174 401 1.2E-62 T 11-10-2018 Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 Pfam PF04055 Radical SAM superfamily 182 352 6.4E-36 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 34 466 1.2E-157 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 Pfam PF00919 Uncharacterized protein family UPF0004 34 135 4.0E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 34 469 3.0E-173 T 11-10-2018 Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 Pfam PF01938 TRAM domain 407 469 3.0E-14 T 11-10-2018 IPR002792 TRAM domain Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 Gene3D G3DSA:3.40.50.12160 33 163 7.4E-35 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 182 202 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 33 470 74.768 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 Gene3D G3DSA:3.80.30.20 177 410 8.7E-98 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Clos_1555 e4ed6938d01c54dcb708e5486d04e8a4 471 SMART SM00729 178 396 5.8E-63 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_2586 bbae72b9435363353b8c22b443e29101 194 Gene3D G3DSA:3.30.565.10 112 194 8.0E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2586 bbae72b9435363353b8c22b443e29101 194 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 142 186 1.8E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2586 bbae72b9435363353b8c22b443e29101 194 SUPERFAMILY SSF55874 132 188 3.41E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0155 1810c3e625f3d3ac5e14b8ebe67a3a86 193 SUPERFAMILY SSF53187 6 189 2.35E-41 T 11-10-2018 Clos_0155 1810c3e625f3d3ac5e14b8ebe67a3a86 193 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 8 184 5.8E-39 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_0155 1810c3e625f3d3ac5e14b8ebe67a3a86 193 SMART SM00646 68 184 2.9E-20 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_0155 1810c3e625f3d3ac5e14b8ebe67a3a86 193 Gene3D G3DSA:3.40.630.40 2 185 1.6E-44 T 11-10-2018 Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 SUPERFAMILY SSF52540 180 459 2.25E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 Pfam PF00271 Helicase conserved C-terminal domain 587 673 2.9E-10 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 SUPERFAMILY SSF52540 545 721 3.09E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 TIGRFAM TIGR00595 priA: primosomal protein N' 303 821 5.0E-201 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 823 23.965 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 Pfam PF04851 Type III restriction enzyme, res subunit 276 442 5.7E-19 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 Gene3D G3DSA:1.10.8.630 2 117 3.9E-22 T 11-10-2018 Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 SMART SM00490 577 674 8.5E-9 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 SMART SM00487 275 474 6.2E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clos_1426 81eda2c6cf6a3ae35194bb387561346f 824 Gene3D G3DSA:3.40.50.300 269 461 2.4E-74 T 11-10-2018 Clos_1018 71557ad1bcd4878da0e333553c8a272c 184 Pfam PF03602 Conserved hypothetical protein 95 33 89 3.5E-6 T 11-10-2018 Clos_1018 71557ad1bcd4878da0e333553c8a272c 184 SUPERFAMILY SSF53335 22 161 2.09E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1018 71557ad1bcd4878da0e333553c8a272c 184 Gene3D G3DSA:3.40.50.150 2 184 3.6E-53 T 11-10-2018 Clos_1018 71557ad1bcd4878da0e333553c8a272c 184 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 15 133 1.3E-29 T 11-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 Gene3D G3DSA:3.20.80.10 128 291 2.6E-35 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 Gene3D G3DSA:1.10.10.60 58 116 6.3E-14 T 11-10-2018 Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 SUPERFAMILY SSF55136 128 290 3.14E-23 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.8E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 SUPERFAMILY SSF46689 57 110 5.82E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 Pfam PF06445 GyrI-like small molecule binding domain 128 281 1.3E-24 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 SUPERFAMILY SSF46689 5 55 6.72E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 Pfam PF12833 Helix-turn-helix domain 28 105 1.2E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 SMART SM00871 128 289 1.5E-23 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 SMART SM00342 21 104 1.3E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2745 b3339af3f51f80a895aa4ef19bb68cda 291 Gene3D G3DSA:1.10.10.60 3 57 1.2E-13 T 11-10-2018 Clos_1221 1b696482d347c4609255ff431687a327 288 SMART SM00849 43 240 7.3E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_1221 1b696482d347c4609255ff431687a327 288 Pfam PF00753 Metallo-beta-lactamase superfamily 42 227 8.6E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_1221 1b696482d347c4609255ff431687a327 288 SUPERFAMILY SSF56281 32 281 4.46E-52 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1221 1b696482d347c4609255ff431687a327 288 Gene3D G3DSA:3.60.15.10 31 278 9.5E-72 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_2617 9a2b4abb7363a6fd81fecdb3da88bd29 409 Gene3D G3DSA:1.10.287.470 88 217 2.1E-54 T 11-10-2018 Clos_2617 9a2b4abb7363a6fd81fecdb3da88bd29 409 SUPERFAMILY SSF111369 43 288 2.62E-7 T 11-10-2018 Clos_2617 9a2b4abb7363a6fd81fecdb3da88bd29 409 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 295 3.8E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Clos_2617 9a2b4abb7363a6fd81fecdb3da88bd29 409 Gene3D G3DSA:2.40.50.100 54 252 2.1E-54 T 11-10-2018 Clos_2617 9a2b4abb7363a6fd81fecdb3da88bd29 409 Gene3D G3DSA:2.40.420.20 38 393 2.1E-54 T 11-10-2018 Clos_2617 9a2b4abb7363a6fd81fecdb3da88bd29 409 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 187 408 1.2E-30 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Clos_2617 9a2b4abb7363a6fd81fecdb3da88bd29 409 Gene3D G3DSA:2.40.30.170 43 335 2.1E-54 T 11-10-2018 Clos_2055 75754745f94b775bd10aef3cb081bba8 232 Gene3D G3DSA:2.60.120.10 9 229 3.2E-79 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_2055 75754745f94b775bd10aef3cb081bba8 232 Gene3D G3DSA:2.60.120.10 11 134 3.2E-79 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_2055 75754745f94b775bd10aef3cb081bba8 232 SUPERFAMILY SSF51182 4 230 5.45E-69 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Clos_2055 75754745f94b775bd10aef3cb081bba8 232 Pfam PF02678 Pirin 12 118 6.4E-32 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Clos_2055 75754745f94b775bd10aef3cb081bba8 232 PIRSF PIRSF006232 2 230 2.2E-54 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 78 8.9E-19 T 11-10-2018 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 227 268 4.6E-5 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 Pfam PF14697 4Fe-4S dicluster domain 144 204 1.9E-10 T 11-10-2018 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2250 7613f697d05fadbce4096a460345e7cd 311 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 121 7.7E-17 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 SMART SM00929 85 125 2.0E-15 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 33 50 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 Gene3D G3DSA:3.30.200.210 210 310 1.5E-9 T 11-10-2018 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 Gene3D G3DSA:3.30.70.20 127 209 2.4E-23 T 11-10-2018 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 Gene3D G3DSA:3.10.20.740 4 125 4.3E-44 T 11-10-2018 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 SUPERFAMILY SSF54292 4 76 1.57E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 SUPERFAMILY SSF53706 189 308 2.98E-17 T 11-10-2018 Clos_2250 7613f697d05fadbce4096a460345e7cd 311 SUPERFAMILY SSF54862 77 215 5.02E-36 T 11-10-2018 Clos_2785 d869e6fb90cedfca7716966fed3e07b3 268 Pfam PF13485 Peptidase MA superfamily 155 265 1.2E-12 T 11-10-2018 IPR039568 Peptidase MA-like Clos_0974 5ad17319bb039f9828952aaaddb7c162 78 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 77 1.6E-20 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Clos_0974 5ad17319bb039f9828952aaaddb7c162 78 PRINTS PR01651 Protein-export SecG membrane protein signature 58 78 8.9E-8 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Clos_0974 5ad17319bb039f9828952aaaddb7c162 78 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 8.9E-8 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Clos_0974 5ad17319bb039f9828952aaaddb7c162 78 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 8.9E-8 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Clos_0974 5ad17319bb039f9828952aaaddb7c162 78 Pfam PF03840 Preprotein translocase SecG subunit 7 76 3.1E-19 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Clos_1086 5e4eb93fbe67ea607ed4106953217c5a 124 SMART SM00418 40 119 8.8E-6 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1086 5e4eb93fbe67ea607ed4106953217c5a 124 SUPERFAMILY SSF46785 24 113 3.21E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1086 5e4eb93fbe67ea607ed4106953217c5a 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 74 89 1.7E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1086 5e4eb93fbe67ea607ed4106953217c5a 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 89 104 1.7E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1086 5e4eb93fbe67ea607ed4106953217c5a 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 72 1.7E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1086 5e4eb93fbe67ea607ed4106953217c5a 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.7E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1086 5e4eb93fbe67ea607ed4106953217c5a 124 Pfam PF01022 Bacterial regulatory protein, arsR family 47 92 3.2E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1086 5e4eb93fbe67ea607ed4106953217c5a 124 Gene3D G3DSA:1.10.10.10 7 123 1.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0095 111975f8e74ab2a5ced370f8b1731531 232 SUPERFAMILY SSF52172 4 179 1.71E-42 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0095 111975f8e74ab2a5ced370f8b1731531 232 SMART SM00862 152 228 7.3E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0095 111975f8e74ab2a5ced370f8b1731531 232 Pfam PF00072 Response regulator receiver domain 7 117 9.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0095 111975f8e74ab2a5ced370f8b1731531 232 SMART SM00448 5 116 2.7E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0095 111975f8e74ab2a5ced370f8b1731531 232 Gene3D G3DSA:3.40.50.2300 1 130 1.9E-39 T 11-10-2018 Clos_0095 111975f8e74ab2a5ced370f8b1731531 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 6.3E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0095 111975f8e74ab2a5ced370f8b1731531 232 Gene3D G3DSA:1.10.10.10 131 232 3.1E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2048 5272a51392d415bf251a9591282b986a 615 SUPERFAMILY SSF81653 116 213 4.32E-27 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 Gene3D G3DSA:3.40.50.1000 286 558 1.6E-88 T 11-10-2018 IPR023214 HAD superfamily Clos_2048 5272a51392d415bf251a9591282b986a 615 SUPERFAMILY SSF56784 303 605 1.98E-54 T 11-10-2018 IPR036412 HAD-like superfamily Clos_2048 5272a51392d415bf251a9591282b986a 615 Gene3D G3DSA:3.40.1110.10 316 436 1.6E-88 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 519 2.6E-45 T 11-10-2018 Clos_2048 5272a51392d415bf251a9591282b986a 615 SUPERFAMILY SSF81665 68 584 2.09E-16 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 Gene3D G3DSA:2.70.150.20 107 218 3.9E-35 T 11-10-2018 Clos_2048 5272a51392d415bf251a9591282b986a 615 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 63 608 7.3E-172 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 44 608 4.6E-124 T 11-10-2018 Clos_2048 5272a51392d415bf251a9591282b986a 615 Pfam PF00122 E1-E2 ATPase 114 285 1.8E-47 T 11-10-2018 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00941 Cadmium-transporting ATPase signature 198 212 7.6E-12 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00941 Cadmium-transporting ATPase signature 98 118 7.6E-12 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00941 Cadmium-transporting ATPase signature 179 195 7.6E-12 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00941 Cadmium-transporting ATPase signature 118 134 7.6E-12 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00941 Cadmium-transporting ATPase signature 28 45 7.6E-12 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 87 591 4.3E-76 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 429 440 9.0E-27 T 11-10-2018 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 452 462 9.0E-27 T 11-10-2018 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 9.0E-27 T 11-10-2018 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 541 9.0E-27 T 11-10-2018 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 524 9.0E-27 T 11-10-2018 Clos_2048 5272a51392d415bf251a9591282b986a 615 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 163 177 9.0E-27 T 11-10-2018 Clos_0428 cc780b75592e553d5befed9e0ddb2181 201 SMART SM00793 6 193 1.5E-16 T 11-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Clos_0428 cc780b75592e553d5befed9e0ddb2181 201 Pfam PF04647 Accessory gene regulator B 9 183 6.7E-42 T 11-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Clos_0415 339df120e02bc3e1450ba72b452bfbfd 271 Gene3D G3DSA:3.60.21.10 45 223 3.1E-27 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_0415 339df120e02bc3e1450ba72b452bfbfd 271 SUPERFAMILY SSF56300 46 270 6.94E-34 T 11-10-2018 Clos_0415 339df120e02bc3e1450ba72b452bfbfd 271 Pfam PF00149 Calcineurin-like phosphoesterase 46 209 3.6E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Clos_2457 992cf81f9d09baee6f228db5acf40f56 411 Gene3D G3DSA:2.30.40.10 5 405 7.2E-167 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_2457 992cf81f9d09baee6f228db5acf40f56 411 SUPERFAMILY SSF51556 51 369 2.38E-103 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_2457 992cf81f9d09baee6f228db5acf40f56 411 Pfam PF07969 Amidohydrolase family 38 378 4.5E-45 T 11-10-2018 IPR013108 Amidohydrolase 3 Clos_2457 992cf81f9d09baee6f228db5acf40f56 411 Gene3D G3DSA:3.20.20.140 51 358 7.2E-167 T 11-10-2018 Clos_2457 992cf81f9d09baee6f228db5acf40f56 411 SUPERFAMILY SSF51338 2 400 5.28E-12 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_1562 ba2f1505b091e5a142bf1e8a664afdd1 279 Pfam PF02401 LytB protein 3 276 7.4E-100 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Clos_1562 ba2f1505b091e5a142bf1e8a664afdd1 279 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 278 4.3E-95 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Clos_1562 ba2f1505b091e5a142bf1e8a664afdd1 279 Gene3D G3DSA:3.40.1010.20 97 189 6.1E-104 T 11-10-2018 Clos_1562 ba2f1505b091e5a142bf1e8a664afdd1 279 Gene3D G3DSA:3.40.50.11270 12 96 6.1E-104 T 11-10-2018 Clos_1562 ba2f1505b091e5a142bf1e8a664afdd1 279 Gene3D G3DSA:3.40.1010.20 3 276 6.1E-104 T 11-10-2018 Clos_1562 ba2f1505b091e5a142bf1e8a664afdd1 279 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 279 32.935 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Clos_2125 2d8de8dddcf1c17ab2f1c6ac06623495 287 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 14 262 5.9E-87 T 11-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate Clos_2125 2d8de8dddcf1c17ab2f1c6ac06623495 287 SUPERFAMILY SSF52518 12 253 1.0E-74 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_2125 2d8de8dddcf1c17ab2f1c6ac06623495 287 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 199 261 6.3E-24 T 11-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal Clos_2125 2d8de8dddcf1c17ab2f1c6ac06623495 287 Gene3D G3DSA:3.40.50.970 64 209 3.5E-25 T 11-10-2018 Clos_2125 2d8de8dddcf1c17ab2f1c6ac06623495 287 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 48 195 1.2E-25 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Clos_2073 694549981594361295b22990eed2ba10 444 SUPERFAMILY SSF158791 3 124 5.1E-30 T 11-10-2018 Clos_2073 694549981594361295b22990eed2ba10 444 SUPERFAMILY SSF54631 127 265 3.03E-32 T 11-10-2018 Clos_2073 694549981594361295b22990eed2ba10 444 Pfam PF00571 CBS domain 192 245 9.9E-9 T 11-10-2018 IPR000644 CBS domain Clos_2073 694549981594361295b22990eed2ba10 444 Pfam PF00571 CBS domain 127 183 5.4E-6 T 11-10-2018 IPR000644 CBS domain Clos_2073 694549981594361295b22990eed2ba10 444 Gene3D G3DSA:1.10.357.20 265 443 1.1E-59 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Clos_2073 694549981594361295b22990eed2ba10 444 Pfam PF01769 Divalent cation transporter 313 435 9.5E-31 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Clos_2073 694549981594361295b22990eed2ba10 444 Gene3D G3DSA:3.10.580.10 124 251 1.8E-43 T 11-10-2018 Clos_2073 694549981594361295b22990eed2ba10 444 SUPERFAMILY SSF161093 270 442 4.05E-50 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Clos_2073 694549981594361295b22990eed2ba10 444 TIGRFAM TIGR00400 mgtE: magnesium transporter 5 443 4.2E-156 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Clos_2073 694549981594361295b22990eed2ba10 444 SMART SM00116 198 246 2.5E-8 T 11-10-2018 IPR000644 CBS domain Clos_2073 694549981594361295b22990eed2ba10 444 SMART SM00924 24 127 4.3E-31 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Clos_2073 694549981594361295b22990eed2ba10 444 Gene3D G3DSA:1.25.60.10 1 122 1.2E-32 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily Clos_2073 694549981594361295b22990eed2ba10 444 Pfam PF03448 MgtE intracellular N domain 26 124 2.5E-29 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Clos_0794 5b720a57f9e975b3ac9279f53c528de0 379 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 370 4.7E-106 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Clos_0794 5b720a57f9e975b3ac9279f53c528de0 379 Gene3D G3DSA:3.40.50.1970 1 166 4.5E-36 T 11-10-2018 Clos_0794 5b720a57f9e975b3ac9279f53c528de0 379 SUPERFAMILY SSF56796 7 377 1.16E-109 T 11-10-2018 Clos_0794 5b720a57f9e975b3ac9279f53c528de0 379 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 155 183 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Clos_0794 5b720a57f9e975b3ac9279f53c528de0 379 Gene3D G3DSA:1.20.1090.10 168 378 7.8E-71 T 11-10-2018 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 256 372 2.9E-9 T 11-10-2018 IPR000014 PAS domain Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 Gene3D G3DSA:3.30.450.20 249 364 1.1E-17 T 11-10-2018 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 SUPERFAMILY SSF158472 200 249 1.83E-9 T 11-10-2018 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 SMART SM00387 486 598 1.7E-42 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 SMART SM00091 258 324 3.1E-6 T 11-10-2018 IPR000014 PAS domain Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 SMART SM00388 373 440 2.0E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 Pfam PF00672 HAMP domain 199 247 7.5E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 SUPERFAMILY SSF55874 430 596 3.57E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 SUPERFAMILY SSF47384 359 439 8.44E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 Gene3D G3DSA:3.30.450.20 28 176 1.9E-5 T 11-10-2018 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 Gene3D G3DSA:1.10.287.130 365 443 3.2E-25 T 11-10-2018 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 Gene3D G3DSA:3.30.565.10 446 605 1.5E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 SUPERFAMILY SSF55785 247 365 2.09E-13 T 11-10-2018 IPR035965 PAS domain superfamily Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 SMART SM00304 199 251 1.2E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 Pfam PF13426 PAS domain 269 365 8.1E-9 T 11-10-2018 IPR000014 PAS domain Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 Gene3D G3DSA:1.10.8.500 198 248 5.1E-8 T 11-10-2018 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 597 3.5E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 576 1.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 1.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 1.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 595 1.8E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2783 6089bbb932d683be7f892a56c0e58abb 607 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 438 2.3E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_1639 8a6d35a426a8c9e6d650a8209a79a7dd 165 SUPERFAMILY SSF56784 5 137 2.55E-23 T 11-10-2018 IPR036412 HAD-like superfamily Clos_1639 8a6d35a426a8c9e6d650a8209a79a7dd 165 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 4 163 5.7E-44 T 11-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like Clos_1639 8a6d35a426a8c9e6d650a8209a79a7dd 165 Pfam PF13242 HAD-hyrolase-like 91 136 9.9E-9 T 11-10-2018 Clos_1639 8a6d35a426a8c9e6d650a8209a79a7dd 165 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 28 136 1.7E-17 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Clos_1639 8a6d35a426a8c9e6d650a8209a79a7dd 165 Gene3D G3DSA:3.40.50.1000 11 157 4.4E-21 T 11-10-2018 IPR023214 HAD superfamily Clos_1954 6284104ab8efdeede6d9226a58d68965 495 Gene3D G3DSA:3.90.1380.10 1 91 3.5E-19 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily Clos_1954 6284104ab8efdeede6d9226a58d68965 495 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Clos_1954 6284104ab8efdeede6d9226a58d68965 495 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 101 414 4.5E-15 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Clos_1954 6284104ab8efdeede6d9226a58d68965 495 Gene3D G3DSA:3.40.50.1100 108 230 1.9E-129 T 11-10-2018 Clos_1954 6284104ab8efdeede6d9226a58d68965 495 TIGRFAM TIGR00260 thrC: threonine synthase 83 439 4.2E-75 T 11-10-2018 IPR004450 Threonine synthase-like Clos_1954 6284104ab8efdeede6d9226a58d68965 495 Pfam PF14821 Threonine synthase N terminus 5 80 1.7E-19 T 11-10-2018 IPR029144 Threonine synthase, N-terminal Clos_1954 6284104ab8efdeede6d9226a58d68965 495 Gene3D G3DSA:3.40.50.1100 98 443 1.9E-129 T 11-10-2018 Clos_1954 6284104ab8efdeede6d9226a58d68965 495 SUPERFAMILY SSF53686 4 493 7.49E-143 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clos_0770 5aa312e2e36b9e52ced1f034b1312761 157 SUPERFAMILY SSF50475 4 156 3.74E-46 T 11-10-2018 Clos_0770 5aa312e2e36b9e52ced1f034b1312761 157 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 12 154 1.3E-25 T 11-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Clos_0770 5aa312e2e36b9e52ced1f034b1312761 157 Gene3D G3DSA:2.30.110.10 2 156 3.7E-44 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Clos_1443 4d20f932802884af25345168c4f4e852 157 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 157 33.523 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Clos_1443 4d20f932802884af25345168c4f4e852 157 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 6.3E-62 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Clos_1443 4d20f932802884af25345168c4f4e852 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.1E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Clos_1443 4d20f932802884af25345168c4f4e852 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.1E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Clos_1443 4d20f932802884af25345168c4f4e852 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.1E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Clos_1443 4d20f932802884af25345168c4f4e852 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.1E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Clos_1443 4d20f932802884af25345168c4f4e852 157 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.1E-47 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Clos_1443 4d20f932802884af25345168c4f4e852 157 SUPERFAMILY SSF52374 1 155 4.86E-47 T 11-10-2018 Clos_1443 4d20f932802884af25345168c4f4e852 157 Pfam PF01467 Cytidylyltransferase-like 5 133 9.0E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Clos_1443 4d20f932802884af25345168c4f4e852 157 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 5.9E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Clos_1443 4d20f932802884af25345168c4f4e852 157 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 122 0.002 T 11-10-2018 Clos_1443 4d20f932802884af25345168c4f4e852 157 Gene3D G3DSA:3.40.50.620 1 157 6.4E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_2566 ab8987a4c80ca283a39e4f1043372057 231 ProSitePatterns PS00449 ATP synthase a subunit signature. 156 165 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2566 ab8987a4c80ca283a39e4f1043372057 231 Gene3D G3DSA:1.20.120.220 69 231 1.1E-37 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2566 ab8987a4c80ca283a39e4f1043372057 231 Pfam PF00119 ATP synthase A chain 21 227 8.5E-57 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2566 ab8987a4c80ca283a39e4f1043372057 231 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 231 13.788 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2566 ab8987a4c80ca283a39e4f1043372057 231 PRINTS PR00123 ATP synthase A subunit signature 153 175 9.3E-16 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2566 ab8987a4c80ca283a39e4f1043372057 231 PRINTS PR00123 ATP synthase A subunit signature 213 228 9.3E-16 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2566 ab8987a4c80ca283a39e4f1043372057 231 PRINTS PR00123 ATP synthase A subunit signature 78 94 9.3E-16 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2566 ab8987a4c80ca283a39e4f1043372057 231 SUPERFAMILY SSF81336 70 227 6.54E-35 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2566 ab8987a4c80ca283a39e4f1043372057 231 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 24 229 1.0E-37 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Gene3D G3DSA:3.10.20.600 375 469 8.3E-33 T 11-10-2018 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Gene3D G3DSA:3.40.30.10 28 123 1.0E-15 T 11-10-2018 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 581 592 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 191 362 1.1E-48 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Pfam PF10531 SLBB domain 388 434 5.8E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 SUPERFAMILY SSF142019 144 383 3.92E-93 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 SUPERFAMILY SSF140490 468 569 6.41E-39 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Pfam PF00037 4Fe-4S binding domain 605 627 1.1E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Pfam PF00037 4Fe-4S binding domain 575 597 1.0E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 SUPERFAMILY SSF52833 28 118 1.45E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 SMART SM00928 472 517 1.5E-25 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Gene3D G3DSA:1.20.1440.230 470 570 3.1E-36 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 SUPERFAMILY SSF142984 384 467 1.14E-24 T 11-10-2018 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 SUPERFAMILY SSF54862 575 629 5.16E-15 T 11-10-2018 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 473 557 4.1E-34 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 485 496 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Gene3D G3DSA:3.40.50.11540 196 374 2.0E-81 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0929 588bafeabdaa231378f7fb37d4cab5de 635 Gene3D G3DSA:3.30.70.20 573 628 1.8E-13 T 11-10-2018 Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 45 514 3.3E-179 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 Pfam PF01434 Peptidase family M41 323 513 2.1E-61 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 SUPERFAMILY SSF52540 90 355 4.33E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 ProSitePatterns PS00674 AAA-protein family signature. 231 249 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 131 260 4.3E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 Gene3D G3DSA:3.40.50.300 83 261 5.2E-67 T 11-10-2018 Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 SMART SM00382 127 263 3.3E-23 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 Gene3D G3DSA:1.10.8.60 262 339 2.4E-27 T 11-10-2018 Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 SUPERFAMILY SSF140990 345 518 2.09E-57 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 Gene3D G3DSA:1.20.58.760 343 529 8.5E-59 T 11-10-2018 Clos_1979 3774a4021d3ea8757da89afb5c3f9ef8 533 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 9 529 31.107 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 PIRSF PIRSF001554 1 386 8.2E-153 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 Gene3D G3DSA:3.30.470.20 1 234 4.2E-93 T 11-10-2018 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 SUPERFAMILY SSF56059 1 238 1.86E-78 T 11-10-2018 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 Gene3D G3DSA:3.30.1490.20 21 104 4.2E-93 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 Pfam PF08442 ATP-grasp domain 2 203 9.8E-78 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 SUPERFAMILY SSF52210 239 385 8.24E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.3E-165 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 Gene3D G3DSA:3.40.50.261 240 386 1.0E-57 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 Pfam PF00549 CoA-ligase 262 381 2.8E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.753 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Clos_0623 55b98c92c727b7d14df7740267e8aef5 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 165 1.2E-28 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 SUPERFAMILY SSF142433 249 409 3.01E-55 T 11-10-2018 IPR036653 CinA-like, C-terminal Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 407 1.0E-123 T 11-10-2018 IPR008135 Competence-induced protein CinA Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 262 406 4.0E-45 T 11-10-2018 IPR008136 CinA, C-terminal Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 PIRSF PIRSF006728 1 413 1.4E-158 T 11-10-2018 IPR008135 Competence-induced protein CinA Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 Pfam PF02464 Competence-damaged protein 256 407 4.5E-56 T 11-10-2018 IPR008136 CinA, C-terminal Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 413 172.897 T 11-10-2018 IPR008135 Competence-induced protein CinA Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 Gene3D G3DSA:3.90.950.20 242 409 1.6E-55 T 11-10-2018 IPR036653 CinA-like, C-terminal Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 Gene3D G3DSA:3.40.980.10 1 171 1.5E-56 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 SUPERFAMILY SSF53218 2 204 7.46E-41 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 SMART SM00852 4 170 2.2E-45 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1943 e539b2c064e5e614e6329c6c7a3cb385 413 Pfam PF00994 Probable molybdopterin binding domain 4 170 2.8E-38 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_2157 d51008824d67930a6a38ea96e38728cf 439 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 427 1.6E-112 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Clos_2157 d51008824d67930a6a38ea96e38728cf 439 Gene3D G3DSA:3.90.190.20 298 436 1.0E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2157 d51008824d67930a6a38ea96e38728cf 439 SUPERFAMILY SSF53623 4 296 1.72E-84 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2157 d51008824d67930a6a38ea96e38728cf 439 SUPERFAMILY SSF53244 298 430 3.11E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2157 d51008824d67930a6a38ea96e38728cf 439 Pfam PF08245 Mur ligase middle domain 44 269 1.4E-16 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Clos_2157 d51008824d67930a6a38ea96e38728cf 439 PIRSF PIRSF001563 1 434 1.0E-133 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Clos_2157 d51008824d67930a6a38ea96e38728cf 439 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 140 155 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Clos_2157 d51008824d67930a6a38ea96e38728cf 439 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 42 65 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Clos_2157 d51008824d67930a6a38ea96e38728cf 439 Gene3D G3DSA:3.40.1190.10 1 297 4.8E-92 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2157 d51008824d67930a6a38ea96e38728cf 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 296 375 7.1E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Clos_2010 d70a76b8130762c7b384c7515476dc42 142 SUPERFAMILY SSF54631 1 117 6.44E-35 T 11-10-2018 Clos_2010 d70a76b8130762c7b384c7515476dc42 142 Pfam PF00571 CBS domain 68 118 3.3E-14 T 11-10-2018 IPR000644 CBS domain Clos_2010 d70a76b8130762c7b384c7515476dc42 142 Pfam PF00571 CBS domain 3 54 5.7E-12 T 11-10-2018 IPR000644 CBS domain Clos_2010 d70a76b8130762c7b384c7515476dc42 142 Gene3D G3DSA:3.10.580.10 1 137 8.1E-40 T 11-10-2018 Clos_2010 d70a76b8130762c7b384c7515476dc42 142 SMART SM00116 10 58 3.9E-6 T 11-10-2018 IPR000644 CBS domain Clos_2010 d70a76b8130762c7b384c7515476dc42 142 SMART SM00116 75 122 1.1E-10 T 11-10-2018 IPR000644 CBS domain Clos_1500 dd6d53655bbcb6bfc57d1d72de8b0363 362 Gene3D G3DSA:3.40.1690.10 225 362 2.8E-57 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Clos_1500 dd6d53655bbcb6bfc57d1d72de8b0363 362 SUPERFAMILY SSF160544 251 358 1.83E-41 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Clos_1500 dd6d53655bbcb6bfc57d1d72de8b0363 362 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 354 1.1E-126 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Clos_1500 dd6d53655bbcb6bfc57d1d72de8b0363 362 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 12 359 9.4E-125 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Clos_1500 dd6d53655bbcb6bfc57d1d72de8b0363 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 15 37 2.1E-42 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Clos_1500 dd6d53655bbcb6bfc57d1d72de8b0363 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 309 330 2.1E-42 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Clos_1500 dd6d53655bbcb6bfc57d1d72de8b0363 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 235 252 2.1E-42 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Clos_1500 dd6d53655bbcb6bfc57d1d72de8b0363 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 279 294 2.1E-42 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Clos_1500 dd6d53655bbcb6bfc57d1d72de8b0363 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 215 233 2.1E-42 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Clos_0120 81c16913c76a9d58b1485d2e6a948a66 174 SUPERFAMILY SSF55729 7 163 1.87E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0120 81c16913c76a9d58b1485d2e6a948a66 174 Pfam PF13420 Acetyltransferase (GNAT) domain 24 154 1.5E-9 T 11-10-2018 Clos_0120 81c16913c76a9d58b1485d2e6a948a66 174 Gene3D G3DSA:3.40.630.30 2 172 1.3E-31 T 11-10-2018 Clos_0830 d663572d4d16a9c1b69fbf7f94e9156c 290 Pfam PF03466 LysR substrate binding domain 88 289 2.5E-41 T 11-10-2018 IPR005119 LysR, substrate-binding Clos_0830 d663572d4d16a9c1b69fbf7f94e9156c 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.7E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_0830 d663572d4d16a9c1b69fbf7f94e9156c 290 Gene3D G3DSA:1.10.10.10 1 90 6.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0830 d663572d4d16a9c1b69fbf7f94e9156c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_0830 d663572d4d16a9c1b69fbf7f94e9156c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_0830 d663572d4d16a9c1b69fbf7f94e9156c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_0830 d663572d4d16a9c1b69fbf7f94e9156c 290 SUPERFAMILY SSF46785 1 86 4.09E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0830 d663572d4d16a9c1b69fbf7f94e9156c 290 SUPERFAMILY SSF53850 89 289 1.21E-38 T 11-10-2018 Clos_0830 d663572d4d16a9c1b69fbf7f94e9156c 290 Gene3D G3DSA:3.40.190.290 91 290 2.7E-36 T 11-10-2018 Clos_0334 9a935b46e80c5b5524e65c6cc5dcfa84 408 Pfam PF13421 SPFH domain-Band 7 family 63 269 7.2E-25 T 11-10-2018 IPR033880 SPFH domain, YdjI-like Clos_0334 9a935b46e80c5b5524e65c6cc5dcfa84 408 SUPERFAMILY SSF117892 160 271 9.81E-5 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 143 2.1E-16 T 11-10-2018 IPR004176 Clp, N-terminal Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 70 3.4E-18 T 11-10-2018 IPR004176 Clp, N-terminal Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Gene3D G3DSA:1.10.8.60 718 811 1.1E-28 T 11-10-2018 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 SUPERFAMILY SSF52540 487 806 4.71E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 718 797 1.7E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Gene3D G3DSA:1.10.1780.10 2 151 1.9E-54 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 SUPERFAMILY SSF81923 6 147 1.81E-30 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 208 337 4.6E-15 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 SMART SM01086 718 807 6.7E-37 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Clos_0456 0f1248cfeee5227019d670f2a5057040 813 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 298 310 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 SUPERFAMILY SSF52540 164 488 2.98E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Pfam PF07724 AAA domain (Cdc48 subfamily) 537 712 2.6E-59 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Pfam PF02151 UvrB/uvrC motif 420 451 5.0E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 542 560 7.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 7.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 663 7.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 587 605 7.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Gene3D G3DSA:4.10.860.10 412 468 3.7E-45 T 11-10-2018 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Gene3D G3DSA:3.40.50.300 491 716 8.7E-92 T 11-10-2018 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 572 590 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 SMART SM00382 203 348 1.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0456 0f1248cfeee5227019d670f2a5057040 813 SMART SM00382 538 719 1.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Gene3D G3DSA:3.40.50.300 153 346 6.2E-73 T 11-10-2018 Clos_0456 0f1248cfeee5227019d670f2a5057040 813 Gene3D G3DSA:1.10.8.60 349 482 3.7E-45 T 11-10-2018 Clos_2405 474e20f43d4a14ca1c3e1f5571fdb006 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 15 376 3.3E-110 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Clos_2405 474e20f43d4a14ca1c3e1f5571fdb006 387 Gene3D G3DSA:1.20.1090.10 177 385 1.7E-68 T 11-10-2018 Clos_2405 474e20f43d4a14ca1c3e1f5571fdb006 387 SUPERFAMILY SSF56796 10 383 3.01E-110 T 11-10-2018 Clos_2405 474e20f43d4a14ca1c3e1f5571fdb006 387 Gene3D G3DSA:3.40.50.1970 5 176 8.1E-43 T 11-10-2018 Clos_2405 474e20f43d4a14ca1c3e1f5571fdb006 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 165 193 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 Gene3D G3DSA:3.90.105.10 36 174 6.1E-77 T 11-10-2018 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 Gene3D G3DSA:2.40.340.10 327 403 3.8E-20 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 Gene3D G3DSA:3.40.190.10 493 581 4.3E-7 T 11-10-2018 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 Gene3D G3DSA:3.40.980.10 175 315 6.1E-77 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1175 feab07942e81912a0cb5a1eabae41045 639 Pfam PF00994 Probable molybdopterin binding domain 180 316 1.4E-24 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1175 feab07942e81912a0cb5a1eabae41045 639 Gene3D G3DSA:2.170.190.11 59 141 6.1E-77 T 11-10-2018 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 SUPERFAMILY SSF63867 326 402 2.09E-16 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 SMART SM00852 180 317 3.7E-33 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1175 feab07942e81912a0cb5a1eabae41045 639 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 313 3.2E-28 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1175 feab07942e81912a0cb5a1eabae41045 639 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 165 3.0E-29 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 Pfam PF12727 PBP superfamily domain 425 614 1.2E-66 T 11-10-2018 IPR024370 PBP domain Clos_1175 feab07942e81912a0cb5a1eabae41045 639 SUPERFAMILY SSF53850 472 629 2.32E-10 T 11-10-2018 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 253 286 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 SUPERFAMILY SSF53218 177 320 1.2E-35 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1175 feab07942e81912a0cb5a1eabae41045 639 Pfam PF03454 MoeA C-terminal region (domain IV) 332 400 1.1E-14 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1175 feab07942e81912a0cb5a1eabae41045 639 SUPERFAMILY SSF63882 13 175 7.98E-35 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1248 132c48d0bda48000ab8a30e1631ee829 151 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 147 2.3E-41 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Clos_1248 132c48d0bda48000ab8a30e1631ee829 151 Pfam PF02130 Uncharacterized protein family UPF0054 15 146 3.9E-45 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Clos_1248 132c48d0bda48000ab8a30e1631ee829 151 Gene3D G3DSA:3.40.390.30 4 150 1.3E-44 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Clos_1248 132c48d0bda48000ab8a30e1631ee829 151 SUPERFAMILY SSF55486 3 149 1.59E-42 T 11-10-2018 Clos_1248 132c48d0bda48000ab8a30e1631ee829 151 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 151 22.817 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Clos_2637 a830ee47faf910acb3c547290b048b8c 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.5E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Clos_2637 a830ee47faf910acb3c547290b048b8c 92 SUPERFAMILY SSF47729 1 91 6.04E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Clos_2637 a830ee47faf910acb3c547290b048b8c 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Clos_2637 a830ee47faf910acb3c547290b048b8c 92 SMART SM00411 1 91 8.7E-41 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Clos_2637 a830ee47faf910acb3c547290b048b8c 92 Gene3D G3DSA:4.10.520.10 1 92 3.8E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Clos_2637 a830ee47faf910acb3c547290b048b8c 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.2E-11 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Clos_2637 a830ee47faf910acb3c547290b048b8c 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.2E-11 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Clos_0313 165db8b2d93ea590129a9b36af40b0d0 435 Gene3D G3DSA:3.40.50.1980 34 168 3.2E-31 T 11-10-2018 Clos_0313 165db8b2d93ea590129a9b36af40b0d0 435 Gene3D G3DSA:3.40.50.1980 253 407 1.8E-5 T 11-10-2018 Clos_0313 165db8b2d93ea590129a9b36af40b0d0 435 SUPERFAMILY SSF53807 17 387 2.68E-69 T 11-10-2018 Clos_0313 165db8b2d93ea590129a9b36af40b0d0 435 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 34 388 1.5E-55 T 11-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Clos_0313 165db8b2d93ea590129a9b36af40b0d0 435 Gene3D G3DSA:3.40.50.1980 174 252 9.6E-16 T 11-10-2018 Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 129 274 1.7E-53 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 Pfam PF13375 RnfC Barrel sandwich hybrid domain 5 103 6.9E-36 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 SUPERFAMILY SSF46548 325 438 6.28E-20 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 436 5.8E-171 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 Pfam PF10531 SLBB domain 288 336 7.9E-13 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 SUPERFAMILY SSF142019 90 294 2.09E-61 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 Pfam PF13237 4Fe-4S dicluster domain 363 417 3.9E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 442 156.269 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 Gene3D G3DSA:3.30.70.20 338 421 6.8E-9 T 11-10-2018 Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 406 417 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 Gene3D G3DSA:3.40.50.11540 134 283 7.2E-14 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_1775 7846fb9c95d019d2514e41f376c0c330 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 367 378 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 77 1.0E-31 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 1.2E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 1.2E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 1.2E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 Pfam PF00366 Ribosomal protein S17 11 77 1.6E-33 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 SUPERFAMILY SSF50249 6 83 7.28E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 5.6E-37 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 25.648 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0501 b49bc35be81d4806bb60e48b54fda0c0 84 Gene3D G3DSA:2.40.50.140 5 84 3.4E-36 T 11-10-2018 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 SUPERFAMILY SSF56059 2 378 7.42E-148 T 11-10-2018 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 760 778 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Gene3D G3DSA:3.20.20.60 531 872 2.7E-153 T 11-10-2018 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 449 460 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 PIRSF PIRSF000853 1 874 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Gene3D G3DSA:1.10.189.10 344 528 3.8E-75 T 11-10-2018 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 517 868 9.1E-92 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 SUPERFAMILY SSF52009 391 511 7.72E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Gene3D G3DSA:3.50.30.10 382 508 3.8E-75 T 11-10-2018 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 SUPERFAMILY SSF51621 511 871 1.7E-132 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 303 355 4.9E-10 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 295 4.4E-48 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Gene3D G3DSA:3.30.1490.20 10 242 7.6E-106 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Gene3D G3DSA:1.20.80.30 110 197 7.6E-106 T 11-10-2018 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Gene3D G3DSA:3.30.470.20 243 340 7.6E-43 T 11-10-2018 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 2 869 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Clos_1258 858040a162e65f18feaeaf16ef687b1c 874 Pfam PF00391 PEP-utilising enzyme, mobile domain 421 502 1.6E-24 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Clos_2216 61cf0ab344f2c61f7eef029e89f5b7d8 229 Gene3D G3DSA:1.10.3720.10 2 229 1.8E-31 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2216 61cf0ab344f2c61f7eef029e89f5b7d8 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 226 6.9E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2216 61cf0ab344f2c61f7eef029e89f5b7d8 229 SUPERFAMILY SSF161098 12 226 3.27E-34 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2138 7a4174a8bdf9af94f5ba5f8d487fa6f7 340 SUPERFAMILY SSF53218 171 311 5.5E-34 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_2138 7a4174a8bdf9af94f5ba5f8d487fa6f7 340 SMART SM00852 174 306 6.8E-26 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_2138 7a4174a8bdf9af94f5ba5f8d487fa6f7 340 Pfam PF00994 Probable molybdopterin binding domain 175 303 4.2E-23 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_2138 7a4174a8bdf9af94f5ba5f8d487fa6f7 340 Gene3D G3DSA:3.40.980.10 136 309 2.3E-31 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1996 1cd36c9cf7257a4d91cccab51c4919ee 162 SUPERFAMILY SSF47240 28 153 3.08E-17 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_1996 1cd36c9cf7257a4d91cccab51c4919ee 162 Gene3D G3DSA:1.20.1260.10 34 158 3.5E-9 T 11-10-2018 IPR012347 Ferritin-like Clos_1996 1cd36c9cf7257a4d91cccab51c4919ee 162 Pfam PF02915 Rubrerythrin 37 152 4.9E-5 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Clos_2631 8db0884adb6203a5ca5462ba89ef3afe 142 Gene3D G3DSA:2.40.50.140 2 84 2.5E-28 T 11-10-2018 Clos_2631 8db0884adb6203a5ca5462ba89ef3afe 142 Pfam PF00575 S1 RNA binding domain 4 74 5.8E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_2631 8db0884adb6203a5ca5462ba89ef3afe 142 SMART SM00316 4 74 3.5E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_2631 8db0884adb6203a5ca5462ba89ef3afe 142 SUPERFAMILY SSF50249 4 81 1.34E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0361 161c21c043b140e986562c527f372d87 302 SMART SM01221 185 299 1.1E-56 T 11-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0361 161c21c043b140e986562c527f372d87 302 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 8 181 2.7E-62 T 11-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_0361 161c21c043b140e986562c527f372d87 302 SUPERFAMILY SSF55116 186 301 1.57E-39 T 11-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_0361 161c21c043b140e986562c527f372d87 302 Pfam PF02971 Formiminotransferase domain 186 289 5.7E-16 T 11-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0361 161c21c043b140e986562c527f372d87 302 SUPERFAMILY SSF55116 6 181 3.4E-61 T 11-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_0361 161c21c043b140e986562c527f372d87 302 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 6 300 1.1E-96 T 11-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0361 161c21c043b140e986562c527f372d87 302 Gene3D G3DSA:3.30.70.670 186 302 2.6E-28 T 11-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0361 161c21c043b140e986562c527f372d87 302 SMART SM01222 6 183 1.9E-91 T 11-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_0361 161c21c043b140e986562c527f372d87 302 Gene3D G3DSA:3.30.990.10 5 183 9.2E-56 T 11-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_1703 f4e1a3f5a4926c227a8db95302aabace 178 Gene3D G3DSA:3.40.630.30 10 177 1.7E-44 T 11-10-2018 Clos_1703 f4e1a3f5a4926c227a8db95302aabace 178 Pfam PF00583 Acetyltransferase (GNAT) family 52 151 1.9E-17 T 11-10-2018 IPR000182 GNAT domain Clos_1703 f4e1a3f5a4926c227a8db95302aabace 178 SUPERFAMILY SSF55729 10 175 2.27E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1978 a2c27f0ff38b1669c1c9b54e44c8d3d0 142 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 55 140 6.5E-35 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Clos_1978 a2c27f0ff38b1669c1c9b54e44c8d3d0 142 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 141 4.0E-55 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Clos_1978 a2c27f0ff38b1669c1c9b54e44c8d3d0 142 SUPERFAMILY SSF54364 1 50 4.84E-18 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Clos_1978 a2c27f0ff38b1669c1c9b54e44c8d3d0 142 ProSitePatterns PS00938 Initiation factor 3 signature. 30 43 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Clos_1978 a2c27f0ff38b1669c1c9b54e44c8d3d0 142 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 48 1.4E-19 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Clos_1978 a2c27f0ff38b1669c1c9b54e44c8d3d0 142 Gene3D G3DSA:3.30.110.10 48 142 1.0E-34 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Clos_1978 a2c27f0ff38b1669c1c9b54e44c8d3d0 142 SUPERFAMILY SSF55200 54 141 4.84E-30 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Clos_1978 a2c27f0ff38b1669c1c9b54e44c8d3d0 142 Gene3D G3DSA:3.10.20.80 1 47 5.6E-20 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Clos_2054 98e283b668b77322dc8a1c089888cffa 285 Pfam PF02567 Phenazine biosynthesis-like protein 6 282 3.8E-61 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Clos_2054 98e283b668b77322dc8a1c089888cffa 285 PIRSF PIRSF016184 1 285 1.1E-67 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Clos_2054 98e283b668b77322dc8a1c089888cffa 285 Gene3D G3DSA:3.10.310.10 4 277 3.1E-79 T 11-10-2018 Clos_2054 98e283b668b77322dc8a1c089888cffa 285 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 284 1.1E-58 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Clos_2054 98e283b668b77322dc8a1c089888cffa 285 Gene3D G3DSA:3.10.310.10 116 275 3.1E-79 T 11-10-2018 Clos_2054 98e283b668b77322dc8a1c089888cffa 285 SUPERFAMILY SSF54506 2 284 3.03E-67 T 11-10-2018 Clos_0421 896bf1fffc6a7431a47957dc2b8a065c 517 Pfam PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit 4 511 2.1E-279 T 11-10-2018 IPR015130 D-Lysine 5,6-aminomutase alpha subunit Clos_0421 896bf1fffc6a7431a47957dc2b8a065c 517 SUPERFAMILY SSF51703 2 514 4.39E-240 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Clos_0421 896bf1fffc6a7431a47957dc2b8a065c 517 Gene3D G3DSA:3.20.20.440 1 515 2.6E-237 T 11-10-2018 IPR037086 D-Lysine 5,6-aminomutase alpha subunit superfamily Clos_0915 369768c38a914d720049a4a77ec031d1 327 Gene3D G3DSA:3.40.50.1980 184 324 1.3E-37 T 11-10-2018 Clos_0915 369768c38a914d720049a4a77ec031d1 327 Gene3D G3DSA:3.40.50.1980 49 181 5.9E-34 T 11-10-2018 Clos_0915 369768c38a914d720049a4a77ec031d1 327 Pfam PF01497 Periplasmic binding protein 68 299 3.0E-36 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_0915 369768c38a914d720049a4a77ec031d1 327 SUPERFAMILY SSF53807 45 324 4.32E-68 T 11-10-2018 Clos_2733 0dcfc0a6722e341e39c19932cdd3b992 427 Hamap MF_01970 Kynureninase [kynU]. 4 411 36.204 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Clos_2733 0dcfc0a6722e341e39c19932cdd3b992 427 PIRSF PIRSF038800 4 419 7.8E-155 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Clos_2733 0dcfc0a6722e341e39c19932cdd3b992 427 Pfam PF00266 Aminotransferase class-V 80 345 8.0E-19 T 11-10-2018 IPR000192 Aminotransferase class V domain Clos_2733 0dcfc0a6722e341e39c19932cdd3b992 427 Gene3D G3DSA:3.90.1150.10 15 411 6.5E-137 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_2733 0dcfc0a6722e341e39c19932cdd3b992 427 TIGRFAM TIGR01814 kynureninase: kynureninase 12 411 1.1E-111 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Clos_2733 0dcfc0a6722e341e39c19932cdd3b992 427 SUPERFAMILY SSF53383 10 412 2.18E-72 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2733 0dcfc0a6722e341e39c19932cdd3b992 427 Gene3D G3DSA:3.40.640.10 46 315 6.5E-137 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_2535 c8cc5e2374e4198890fe1f4718260a1c 504 SMART SM00267 71 241 3.8E-34 T 11-10-2018 IPR000160 GGDEF domain Clos_2535 c8cc5e2374e4198890fe1f4718260a1c 504 SMART SM00052 251 495 1.5E-121 T 11-10-2018 IPR001633 EAL domain Clos_2535 c8cc5e2374e4198890fe1f4718260a1c 504 SUPERFAMILY SSF141868 257 500 4.84E-90 T 11-10-2018 IPR035919 EAL domain superfamily Clos_2535 c8cc5e2374e4198890fe1f4718260a1c 504 Pfam PF00990 Diguanylate cyclase, GGDEF domain 86 235 1.3E-32 T 11-10-2018 IPR000160 GGDEF domain Clos_2535 c8cc5e2374e4198890fe1f4718260a1c 504 Pfam PF00563 EAL domain 257 490 1.4E-74 T 11-10-2018 IPR001633 EAL domain Clos_2535 c8cc5e2374e4198890fe1f4718260a1c 504 SUPERFAMILY SSF55073 87 243 5.18E-36 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_2535 c8cc5e2374e4198890fe1f4718260a1c 504 Gene3D G3DSA:3.20.20.450 254 503 1.3E-101 T 11-10-2018 IPR035919 EAL domain superfamily Clos_2535 c8cc5e2374e4198890fe1f4718260a1c 504 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 78 239 7.5E-29 T 11-10-2018 IPR000160 GGDEF domain Clos_2535 c8cc5e2374e4198890fe1f4718260a1c 504 Gene3D G3DSA:3.30.70.270 76 253 7.1E-43 T 11-10-2018 Clos_2161 0621f7b5a127aaa0a804fa281fa90ef4 797 SUPERFAMILY SSF53187 359 789 1.26E-24 T 11-10-2018 Clos_2161 0621f7b5a127aaa0a804fa281fa90ef4 797 SUPERFAMILY SSF161098 71 232 1.01E-9 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2161 0621f7b5a127aaa0a804fa281fa90ef4 797 Gene3D G3DSA:1.10.3720.10 66 302 6.1E-9 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2161 0621f7b5a127aaa0a804fa281fa90ef4 797 Gene3D G3DSA:3.40.630.10 549 793 3.8E-19 T 11-10-2018 Clos_2161 0621f7b5a127aaa0a804fa281fa90ef4 797 Pfam PF04389 Peptidase family M28 605 788 1.9E-9 T 11-10-2018 IPR007484 Peptidase M28 Clos_2161 0621f7b5a127aaa0a804fa281fa90ef4 797 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 293 7.4E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_1198 26380d782ff6ebc4fc957e8a28712191 253 SMART SM00954 58 181 5.8E-43 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Clos_1198 26380d782ff6ebc4fc957e8a28712191 253 SUPERFAMILY SSF81301 19 211 1.11E-57 T 11-10-2018 Clos_1198 26380d782ff6ebc4fc957e8a28712191 253 Gene3D G3DSA:1.10.287.860 164 226 3.6E-20 T 11-10-2018 Clos_1198 26380d782ff6ebc4fc957e8a28712191 253 Gene3D G3DSA:3.30.460.10 13 162 1.2E-49 T 11-10-2018 Clos_1198 26380d782ff6ebc4fc957e8a28712191 253 Pfam PF04607 Region found in RelA / SpoT proteins 58 179 1.6E-37 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Pfam PF08264 Anticodon-binding domain of tRNA 650 761 1.2E-16 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 SUPERFAMILY SSF50677 225 414 1.36E-48 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Gene3D G3DSA:3.40.50.620 33 575 4.2E-244 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 801 21.705 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Gene3D G3DSA:3.90.740.10 227 414 4.2E-244 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.1E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 489 507 2.1E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 2.1E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 571 2.1E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.1E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.1E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 2.1E-46 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 416 606 3.6E-19 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 403 7.2E-64 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Gene3D G3DSA:1.10.730.10 621 719 3.0E-12 T 11-10-2018 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 802 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Gene3D G3DSA:3.10.20.590 740 802 7.8E-18 T 11-10-2018 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 SUPERFAMILY SSF47323 622 802 4.49E-32 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 SUPERFAMILY SSF52374 3 629 4.33E-142 T 11-10-2018 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Pfam PF09334 tRNA synthetases class I (M) 40 188 4.2E-21 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2587 e8978d7d7d00089f5980ff7a4174e290 802 Gene3D G3DSA:2.30.210.10 576 591 4.2E-244 T 11-10-2018 Clos_1559 2b178da360a6d88e2dc56defbfbee6c4 350 SUPERFAMILY SSF101821 70 175 9.77E-26 T 11-10-2018 Clos_1559 2b178da360a6d88e2dc56defbfbee6c4 350 SUPERFAMILY SSF53187 2 337 7.98E-65 T 11-10-2018 Clos_1559 2b178da360a6d88e2dc56defbfbee6c4 350 Gene3D G3DSA:3.40.630.10 7 334 4.7E-118 T 11-10-2018 Clos_1559 2b178da360a6d88e2dc56defbfbee6c4 350 PIRSF PIRSF001123 1 350 2.1E-111 T 11-10-2018 IPR008007 Peptidase M42 Clos_1559 2b178da360a6d88e2dc56defbfbee6c4 350 Gene3D G3DSA:2.40.30.40 70 159 4.7E-118 T 11-10-2018 IPR023367 Peptidase M42, domain 2 Clos_1559 2b178da360a6d88e2dc56defbfbee6c4 350 Pfam PF05343 M42 glutamyl aminopeptidase 44 331 1.0E-90 T 11-10-2018 IPR008007 Peptidase M42 Clos_0031 d3272a7782d9fbd810580d1670559368 253 TIGRFAM TIGR04482 D_pro_red_PrdD: proline reductase cluster protein PrdD 8 253 8.1E-121 T 11-10-2018 IPR031000 Proline reductase cluster protein PrdD Clos_0031 d3272a7782d9fbd810580d1670559368 253 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 9 101 1.3E-6 T 11-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Clos_1202 1e16ceac633958e1d0d3fea8a235ec21 224 SMART SM00862 146 220 4.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_1202 1e16ceac633958e1d0d3fea8a235ec21 224 SUPERFAMILY SSF52172 1 180 7.12E-44 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1202 1e16ceac633958e1d0d3fea8a235ec21 224 Gene3D G3DSA:3.40.50.2300 1 127 4.2E-38 T 11-10-2018 Clos_1202 1e16ceac633958e1d0d3fea8a235ec21 224 Pfam PF00072 Response regulator receiver domain 4 113 3.0E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1202 1e16ceac633958e1d0d3fea8a235ec21 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 2.4E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_1202 1e16ceac633958e1d0d3fea8a235ec21 224 Gene3D G3DSA:1.10.10.10 128 223 1.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1202 1e16ceac633958e1d0d3fea8a235ec21 224 SMART SM00448 2 113 7.0E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1020 eec39595599c9234946de19b9f231de2 340 SUPERFAMILY SSF159672 1 225 5.75E-57 T 11-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Clos_1020 eec39595599c9234946de19b9f231de2 340 Pfam PF11760 Cobalamin synthesis G N-terminal 47 127 4.7E-35 T 11-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Clos_1020 eec39595599c9234946de19b9f231de2 340 Gene3D G3DSA:3.30.420.180 209 339 2.6E-31 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Clos_1020 eec39595599c9234946de19b9f231de2 340 Pfam PF01890 Cobalamin synthesis G C-terminus 219 334 7.4E-29 T 11-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 Clos_1020 eec39595599c9234946de19b9f231de2 340 SUPERFAMILY SSF159664 211 337 1.44E-33 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Clos_1020 eec39595599c9234946de19b9f231de2 340 Gene3D G3DSA:3.40.50.11220 1 122 8.7E-35 T 11-10-2018 Clos_0684 105e2e2af88bbcad9b78ca2b93f1e647 583 Pfam PF00005 ABC transporter 352 501 2.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0684 105e2e2af88bbcad9b78ca2b93f1e647 583 Gene3D G3DSA:1.20.1560.10 1 324 5.1E-51 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0684 105e2e2af88bbcad9b78ca2b93f1e647 583 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0684 105e2e2af88bbcad9b78ca2b93f1e647 583 Gene3D G3DSA:3.40.50.300 330 578 1.1E-84 T 11-10-2018 Clos_0684 105e2e2af88bbcad9b78ca2b93f1e647 583 SUPERFAMILY SSF52540 332 570 3.0E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0684 105e2e2af88bbcad9b78ca2b93f1e647 583 Pfam PF00664 ABC transporter transmembrane region 21 293 1.5E-23 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_0684 105e2e2af88bbcad9b78ca2b93f1e647 583 SMART SM00382 361 547 6.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0684 105e2e2af88bbcad9b78ca2b93f1e647 583 SUPERFAMILY SSF90123 10 323 1.57E-54 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1579 b5e86f5cb24fe874e3f02ab9076437c9 308 SUPERFAMILY SSF63380 73 157 1.39E-10 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Clos_1579 b5e86f5cb24fe874e3f02ab9076437c9 308 Gene3D G3DSA:2.40.30.10 61 156 2.1E-6 T 11-10-2018 Clos_1411 ccb863695bf02fa9046466e4b1f98d64 159 Pfam PF05103 DivIVA protein 2 132 4.6E-48 T 11-10-2018 IPR007793 DivIVA family Clos_1411 ccb863695bf02fa9046466e4b1f98d64 159 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 2 32 1.2E-15 T 11-10-2018 IPR019933 DivIVA domain Clos_0746 205c030700603da853cf00e3f7d42497 266 Pfam PF00881 Nitroreductase family 87 247 6.0E-29 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Clos_0746 205c030700603da853cf00e3f7d42497 266 SUPERFAMILY SSF55469 84 262 1.44E-33 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_0746 205c030700603da853cf00e3f7d42497 266 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 43 54 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0746 205c030700603da853cf00e3f7d42497 266 Gene3D G3DSA:3.30.70.20 3 65 7.8E-13 T 11-10-2018 Clos_0746 205c030700603da853cf00e3f7d42497 266 SUPERFAMILY SSF54862 6 70 7.5E-18 T 11-10-2018 Clos_0746 205c030700603da853cf00e3f7d42497 266 Pfam PF13187 4Fe-4S dicluster domain 13 57 1.2E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0746 205c030700603da853cf00e3f7d42497 266 Gene3D G3DSA:3.40.109.10 78 260 6.6E-37 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 Gene3D G3DSA:3.30.420.40 9 354 1.3E-75 T 11-10-2018 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 Gene3D G3DSA:3.30.420.40 170 344 1.3E-75 T 11-10-2018 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 Pfam PF00012 Hsp70 protein 47 353 1.5E-45 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 Gene3D G3DSA:3.90.640.10 207 293 1.3E-75 T 11-10-2018 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 PRINTS PR00301 70kDa heat shock protein signature 312 328 1.0E-11 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 PRINTS PR00301 70kDa heat shock protein signature 6 19 1.0E-11 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 PRINTS PR00301 70kDa heat shock protein signature 123 143 1.0E-11 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 PRINTS PR00301 70kDa heat shock protein signature 182 192 1.0E-11 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 SUPERFAMILY SSF53067 173 357 9.07E-33 T 11-10-2018 Clos_2034 5bb69a16f443a21dae7c8a6ae9c7fb7f 487 SUPERFAMILY SSF53067 6 163 5.18E-23 T 11-10-2018 Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 209 1.7E-15 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 4 320 34.44 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 Pfam PF02237 Biotin protein ligase C terminal domain 274 320 6.8E-7 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 SUPERFAMILY SSF46785 2 57 8.68E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 Gene3D G3DSA:2.30.30.100 274 321 2.8E-10 T 11-10-2018 Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 SUPERFAMILY SSF55681 69 256 6.84E-61 T 11-10-2018 Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 Gene3D G3DSA:1.10.10.10 1 59 2.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 SUPERFAMILY SSF50037 276 320 5.95E-6 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 Gene3D G3DSA:3.30.930.10 65 271 2.9E-63 T 11-10-2018 Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 Pfam PF08279 HTH domain 2 55 2.2E-16 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Clos_0444 d9f6951cbee81b1c3e5506e0c7476e0f 326 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 319 1.7E-64 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Clos_2648 9e282ffd5fe73f8a015cb1ac5cc43d8c 273 Gene3D G3DSA:1.10.10.10 3 74 2.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2648 9e282ffd5fe73f8a015cb1ac5cc43d8c 273 Gene3D G3DSA:3.40.50.2020 76 272 9.3E-55 T 11-10-2018 Clos_2648 9e282ffd5fe73f8a015cb1ac5cc43d8c 273 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 13 74 1.0E-17 T 11-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 Clos_2648 9e282ffd5fe73f8a015cb1ac5cc43d8c 273 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 4 265 1.9E-107 T 11-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 Clos_2648 9e282ffd5fe73f8a015cb1ac5cc43d8c 273 SUPERFAMILY SSF46785 4 74 2.72E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2648 9e282ffd5fe73f8a015cb1ac5cc43d8c 273 SUPERFAMILY SSF53271 86 257 3.55E-37 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_2648 9e282ffd5fe73f8a015cb1ac5cc43d8c 273 Pfam PF09182 Bacterial purine repressor, N-terminal 5 74 2.5E-28 T 11-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 Clos_2648 9e282ffd5fe73f8a015cb1ac5cc43d8c 273 Pfam PF00156 Phosphoribosyl transferase domain 131 245 1.5E-16 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Clos_1436 7e9c74da7782ff8bbcaa9f781dc96ab9 217 Pfam PF00834 Ribulose-phosphate 3 epimerase family 2 199 4.7E-86 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Clos_1436 7e9c74da7782ff8bbcaa9f781dc96ab9 217 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 211 3.9E-89 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Clos_1436 7e9c74da7782ff8bbcaa9f781dc96ab9 217 PIRSF PIRSF001461 1 217 3.0E-96 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Clos_1436 7e9c74da7782ff8bbcaa9f781dc96ab9 217 SUPERFAMILY SSF51366 1 213 1.75E-76 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Clos_1436 7e9c74da7782ff8bbcaa9f781dc96ab9 217 Gene3D G3DSA:3.20.20.70 1 216 1.6E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1436 7e9c74da7782ff8bbcaa9f781dc96ab9 217 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Clos_1436 7e9c74da7782ff8bbcaa9f781dc96ab9 217 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 SUPERFAMILY SSF56003 119 780 5.89E-180 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 Gene3D G3DSA:3.30.365.10 128 368 8.4E-115 T 11-10-2018 Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 Gene3D G3DSA:3.90.1170.50 38 127 8.4E-115 T 11-10-2018 Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 Gene3D G3DSA:3.30.365.10 21 292 8.4E-115 T 11-10-2018 Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 127 2.6E-29 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 SMART SM01008 23 127 3.4E-46 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 Gene3D G3DSA:3.30.365.10 463 635 7.6E-116 T 11-10-2018 Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 Gene3D G3DSA:3.30.365.10 379 776 7.6E-116 T 11-10-2018 Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 720 3.4E-161 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Clos_0879 8fc85bce873aeb68b3df514fe11cbc4b 792 SUPERFAMILY SSF54665 4 144 3.4E-42 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Clos_1543 11727911d2e39c3c41089f8be34297ae 515 SMART SM00471 327 433 5.9E-14 T 11-10-2018 IPR003607 HD/PDEase domain Clos_1543 11727911d2e39c3c41089f8be34297ae 515 Gene3D G3DSA:3.30.1370.10 200 305 3.7E-8 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Clos_1543 11727911d2e39c3c41089f8be34297ae 515 Pfam PF00013 KH domain 208 265 2.7E-6 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Clos_1543 11727911d2e39c3c41089f8be34297ae 515 Hamap MF_00335 Ribonuclease Y [rny]. 7 515 25.717 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Clos_1543 11727911d2e39c3c41089f8be34297ae 515 Pfam PF01966 HD domain 331 423 8.5E-20 T 11-10-2018 IPR006674 HD domain Clos_1543 11727911d2e39c3c41089f8be34297ae 515 Pfam PF12072 Domain of unknown function (DUF3552) 10 200 4.9E-67 T 11-10-2018 IPR022711 Ribonuclease Y, N-terminal Clos_1543 11727911d2e39c3c41089f8be34297ae 515 SUPERFAMILY SSF109604 311 462 4.04E-31 T 11-10-2018 Clos_1543 11727911d2e39c3c41089f8be34297ae 515 SMART SM00322 203 270 6.6E-7 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Clos_1543 11727911d2e39c3c41089f8be34297ae 515 SUPERFAMILY SSF54791 203 299 3.8E-17 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Clos_1543 11727911d2e39c3c41089f8be34297ae 515 Gene3D G3DSA:1.10.3210.10 313 466 6.0E-19 T 11-10-2018 Clos_1543 11727911d2e39c3c41089f8be34297ae 515 TIGRFAM TIGR00277 HDIG: HDIG domain 327 404 9.9E-24 T 11-10-2018 IPR006675 HDIG domain Clos_1543 11727911d2e39c3c41089f8be34297ae 515 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 11 515 2.2E-241 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Clos_0668 aea2d1075e9ea36296f5e71273020836 432 SMART SM00388 225 290 7.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0668 aea2d1075e9ea36296f5e71273020836 432 Gene3D G3DSA:1.10.287.130 221 292 2.3E-14 T 11-10-2018 Clos_0668 aea2d1075e9ea36296f5e71273020836 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 429 5.0E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0668 aea2d1075e9ea36296f5e71273020836 432 SMART SM00304 172 224 1.5E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0668 aea2d1075e9ea36296f5e71273020836 432 SUPERFAMILY SSF158472 173 221 1.57E-10 T 11-10-2018 Clos_0668 aea2d1075e9ea36296f5e71273020836 432 SUPERFAMILY SSF47384 208 285 1.65E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0668 aea2d1075e9ea36296f5e71273020836 432 Gene3D G3DSA:1.10.8.500 171 220 4.0E-13 T 11-10-2018 Clos_0668 aea2d1075e9ea36296f5e71273020836 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 284 3.8E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0668 aea2d1075e9ea36296f5e71273020836 432 SUPERFAMILY SSF55874 298 430 4.71E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0668 aea2d1075e9ea36296f5e71273020836 432 SMART SM00387 333 431 3.3E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0668 aea2d1075e9ea36296f5e71273020836 432 Gene3D G3DSA:3.30.565.10 295 432 1.0E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 Pfam PF03471 Transporter associated domain 341 416 3.8E-20 T 11-10-2018 IPR005170 Transporter-associated domain Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 SMART SM00116 215 264 5.8 T 11-10-2018 IPR000644 CBS domain Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 SMART SM00116 277 325 2.1 T 11-10-2018 IPR000644 CBS domain Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 SUPERFAMILY SSF54631 201 342 2.27E-30 T 11-10-2018 Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 Gene3D G3DSA:3.30.465.10 334 419 1.1E-21 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 SMART SM01091 340 418 2.4E-18 T 11-10-2018 IPR005170 Transporter-associated domain Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 Gene3D G3DSA:3.10.580.10 186 333 1.1E-54 T 11-10-2018 Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 SUPERFAMILY SSF56176 338 417 5.45E-19 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 Pfam PF00571 CBS domain 207 260 7.3E-5 T 11-10-2018 IPR000644 CBS domain Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 Pfam PF00571 CBS domain 275 325 1.1E-5 T 11-10-2018 IPR000644 CBS domain Clos_2426 dd882771412b0354e49bc1ec1bcd8eda 419 Pfam PF01595 Domain of unknown function DUF21 12 191 3.8E-54 T 11-10-2018 IPR002550 CNNM, transmembrane domain Clos_2088 114d2bfa909ca7bed96ee6446eb9cdef 459 Pfam PF01523 Putative modulator of DNA gyrase 21 313 2.4E-64 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Clos_2088 114d2bfa909ca7bed96ee6446eb9cdef 459 Gene3D G3DSA:3.30.2290.10 2 221 8.2E-23 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Clos_2088 114d2bfa909ca7bed96ee6446eb9cdef 459 SUPERFAMILY SSF111283 4 459 2.35E-123 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Clos_2088 114d2bfa909ca7bed96ee6446eb9cdef 459 PIRSF PIRSF004919 1 459 1.4E-128 T 11-10-2018 IPR025502 TldD Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 SMART SM00382 147 275 6.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 SUPERFAMILY SSF52540 114 327 1.98E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 Pfam PF11638 DnaA N-terminal domain 7 68 1.9E-13 T 11-10-2018 IPR024633 DnaA N-terminal domain Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 212 226 5.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 180 194 5.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 148 168 5.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 408 427 5.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 246 273 5.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 359 427 1.3E-31 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 SUPERFAMILY SSF48295 347 449 1.23E-35 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 448 1.6E-181 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 449 34.379 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 ProSitePatterns PS01008 DnaA protein signature. 408 427 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 SMART SM00760 358 427 4.0E-42 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 Gene3D G3DSA:3.30.300.180 1 83 2.7E-23 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 Pfam PF00308 Bacterial dnaA protein 115 332 1.1E-103 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 Gene3D G3DSA:1.10.1750.10 351 450 5.9E-36 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 Gene3D G3DSA:1.10.8.60 281 350 1.2E-28 T 11-10-2018 Clos_0001 7a6bb8aa3b8fb49e5201a25f26706e20 451 Gene3D G3DSA:3.40.50.300 100 279 1.0E-54 T 11-10-2018 Clos_1089 1d26fd039e0655d6999fc02aa4dbbdda 89 SUPERFAMILY SSF52833 5 72 1.25E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_1089 1d26fd039e0655d6999fc02aa4dbbdda 89 Gene3D G3DSA:3.40.30.10 2 78 6.9E-10 T 11-10-2018 Clos_1089 1d26fd039e0655d6999fc02aa4dbbdda 89 Pfam PF13192 Thioredoxin domain 6 69 1.3E-6 T 11-10-2018 IPR012336 Thioredoxin-like fold Clos_0438 cb4c1284ff5d1bf029cdc09db37011eb 313 SMART SM00382 42 255 1.2E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0438 cb4c1284ff5d1bf029cdc09db37011eb 313 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 10 305 7.4E-110 T 11-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Clos_0438 cb4c1284ff5d1bf029cdc09db37011eb 313 Gene3D G3DSA:3.40.50.300 41 245 8.4E-83 T 11-10-2018 Clos_0438 cb4c1284ff5d1bf029cdc09db37011eb 313 Pfam PF03308 ArgK protein 16 276 1.7E-95 T 11-10-2018 Clos_0438 cb4c1284ff5d1bf029cdc09db37011eb 313 SUPERFAMILY SSF52540 3 306 1.61E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1036 e00a55482f7bae2f9d8f9c25dc7740bd 117 SUPERFAMILY SSF69118 3 114 1.96E-30 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Clos_1036 e00a55482f7bae2f9d8f9c25dc7740bd 117 Pfam PF02627 Carboxymuconolactone decarboxylase family 28 106 4.1E-22 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Clos_1036 e00a55482f7bae2f9d8f9c25dc7740bd 117 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 89 9.9E-17 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Clos_1036 e00a55482f7bae2f9d8f9c25dc7740bd 117 Gene3D G3DSA:1.20.1290.10 1 117 3.4E-32 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Clos_0535 f7578286c96be5a73460f2d89f139aec 450 PIRSF PIRSF005353 1 450 1.5E-188 T 11-10-2018 IPR026033 Purine permease PbuG-like Clos_0535 f7578286c96be5a73460f2d89f139aec 450 Pfam PF00860 Permease family 27 409 1.6E-47 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 468 2.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 468 488 2.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 SUPERFAMILY SSF52540 170 416 8.3E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 SUPERFAMILY SSF46689 385 488 1.66E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 385 394 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 34 99 9.0E-10 T 11-10-2018 IPR000014 PAS domain Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 Pfam PF00158 Sigma-54 interaction domain 171 338 4.2E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 Gene3D G3DSA:1.10.10.60 434 489 1.2E-17 T 11-10-2018 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 Gene3D G3DSA:3.30.450.20 36 135 6.3E-16 T 11-10-2018 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 Pfam PF02954 Bacterial regulatory protein, Fis family 446 485 2.7E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 Gene3D G3DSA:1.10.8.60 343 423 1.5E-25 T 11-10-2018 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 195 208 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 SMART SM00382 191 343 2.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 SUPERFAMILY SSF55785 34 126 6.46E-11 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 Pfam PF00989 PAS fold 34 92 4.3E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 SMART SM00091 33 99 1.2E-5 T 11-10-2018 IPR000014 PAS domain Clos_0085 6b3b4818ba876ae9c00a578e6be4ae45 489 Gene3D G3DSA:3.40.50.300 157 342 3.9E-65 T 11-10-2018 Clos_2691 729eeb40292d407ca76ab230c7a92359 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 5.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_2691 729eeb40292d407ca76ab230c7a92359 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 5.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_2691 729eeb40292d407ca76ab230c7a92359 193 SUPERFAMILY SSF48498 88 191 2.54E-15 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Clos_2691 729eeb40292d407ca76ab230c7a92359 193 Gene3D G3DSA:1.10.357.10 3 193 5.4E-32 T 11-10-2018 Clos_2691 729eeb40292d407ca76ab230c7a92359 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Clos_2691 729eeb40292d407ca76ab230c7a92359 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 65 1.2E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_2691 729eeb40292d407ca76ab230c7a92359 193 SUPERFAMILY SSF46689 8 80 2.69E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2691 729eeb40292d407ca76ab230c7a92359 193 Pfam PF08359 YsiA-like protein, C-terminal region 130 190 1.7E-6 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal Clos_1761 cf3ab7436d8d8d2bb08d3993eaf23c11 212 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 6 209 21.072 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Clos_1761 cf3ab7436d8d8d2bb08d3993eaf23c11 212 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 106 206 7.7E-33 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Clos_1761 cf3ab7436d8d8d2bb08d3993eaf23c11 212 Gene3D G3DSA:2.160.20.70 100 212 2.1E-41 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Clos_1761 cf3ab7436d8d8d2bb08d3993eaf23c11 212 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 7 207 5.4E-34 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Clos_1761 cf3ab7436d8d8d2bb08d3993eaf23c11 212 SUPERFAMILY SSF63848 104 208 1.31E-33 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Clos_1717 61682723660237ec87b87b302f37cbc7 168 Gene3D G3DSA:2.160.10.10 1 168 1.2E-65 T 11-10-2018 Clos_1717 61682723660237ec87b87b302f37cbc7 168 SUPERFAMILY SSF51161 4 164 2.5E-50 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Clos_1717 61682723660237ec87b87b302f37cbc7 168 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 49 85 0.0017 T 11-10-2018 IPR001451 Hexapeptide repeat Clos_1717 61682723660237ec87b87b302f37cbc7 168 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 43 1.5E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Clos_1717 61682723660237ec87b87b302f37cbc7 168 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 1.5E-8 T 11-10-2018 IPR001451 Hexapeptide repeat Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 SUPERFAMILY SSF54211 477 596 4.55E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Pfam PF00679 Elongation factor G C-terminus 598 685 6.8E-34 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Gene3D G3DSA:3.30.70.870 403 481 3.1E-31 T 11-10-2018 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 SUPERFAMILY SSF52540 6 280 8.56E-109 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Gene3D G3DSA:3.30.230.10 482 686 2.5E-92 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 SMART SM00889 478 596 1.3E-68 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Pfam PF03144 Elongation factor Tu domain 2 322 389 9.3E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 SUPERFAMILY SSF54980 402 479 1.26E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 SMART SM00838 598 686 1.2E-61 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Gene3D G3DSA:2.40.30.10 291 398 4.5E-46 T 11-10-2018 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Gene3D G3DSA:3.40.50.300 2 290 8.7E-110 T 11-10-2018 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 PRINTS PR00315 GTP-binding elongation factor signature 130 139 4.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Pfam PF03764 Elongation factor G, domain IV 477 595 1.5E-45 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 1.2E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 113.498 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 688 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 1.8E-65 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Pfam PF14492 Elongation Factor G, domain II 402 476 4.0E-33 T 11-10-2018 Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 SUPERFAMILY SSF54980 601 688 3.45E-33 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 SUPERFAMILY SSF50447 263 400 1.49E-37 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_0489 1ad93f356e12bb8dec6a74f05110b6ed 690 Gene3D G3DSA:3.30.70.240 602 673 2.5E-92 T 11-10-2018 Clos_1591 d1cdb79f87e28ab7f27b681fb53c4e41 273 SUPERFAMILY SSF53167 4 273 4.45E-96 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Clos_1591 d1cdb79f87e28ab7f27b681fb53c4e41 273 PIRSF PIRSF000477 1 273 1.9E-115 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Clos_1591 d1cdb79f87e28ab7f27b681fb53c4e41 273 Pfam PF01048 Phosphorylase superfamily 25 270 5.0E-54 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Clos_1591 d1cdb79f87e28ab7f27b681fb53c4e41 273 Gene3D G3DSA:3.40.50.1580 1 272 2.7E-112 T 11-10-2018 Clos_1591 d1cdb79f87e28ab7f27b681fb53c4e41 273 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 271 3.0E-110 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Clos_1591 d1cdb79f87e28ab7f27b681fb53c4e41 273 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 11-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 Clos_1591 d1cdb79f87e28ab7f27b681fb53c4e41 273 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 270 1.4E-112 T 11-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 SUPERFAMILY SSF109604 138 307 1.36E-39 T 11-10-2018 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 Pfam PF12833 Helix-turn-helix domain 30 106 7.2E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 102 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 SUPERFAMILY SSF46689 61 107 7.17E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 SMART SM00471 176 271 1.1E-6 T 11-10-2018 IPR003607 HD/PDEase domain Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 Gene3D G3DSA:1.10.10.60 58 109 4.4E-8 T 11-10-2018 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 Gene3D G3DSA:1.10.3210.10 130 308 4.6E-45 T 11-10-2018 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 SUPERFAMILY SSF46689 12 58 4.93E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 Gene3D G3DSA:1.10.10.60 2 57 4.8E-18 T 11-10-2018 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 SMART SM00342 24 106 3.2E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 Pfam PF13328 HD domain 161 242 3.4E-13 T 11-10-2018 IPR003607 HD/PDEase domain Clos_0592 070ec9427b1d763c23a726abccf1aac5 308 Pfam PF13328 HD domain 247 290 1.5E-8 T 11-10-2018 IPR003607 HD/PDEase domain Clos_1106 1488527a22805f90650012e122f4fae0 111 Pfam PF01022 Bacterial regulatory protein, arsR family 27 70 1.5E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1106 1488527a22805f90650012e122f4fae0 111 Gene3D G3DSA:1.10.10.10 5 108 2.0E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1106 1488527a22805f90650012e122f4fae0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 7.7E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1106 1488527a22805f90650012e122f4fae0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 7.7E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1106 1488527a22805f90650012e122f4fae0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 7.7E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1106 1488527a22805f90650012e122f4fae0 111 SUPERFAMILY SSF46785 17 104 1.89E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1106 1488527a22805f90650012e122f4fae0 111 SMART SM00418 18 96 3.1E-28 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1550 cb41440f150b52919d8f61dbecf4ffa2 422 Pfam PF06838 Methionine gamma-lyase 19 419 5.2E-189 T 11-10-2018 IPR009651 Putative methionine gamma-lyase Clos_1550 cb41440f150b52919d8f61dbecf4ffa2 422 SUPERFAMILY SSF53383 38 373 4.37E-45 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1550 cb41440f150b52919d8f61dbecf4ffa2 422 Gene3D G3DSA:3.40.640.10 63 276 4.3E-180 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1550 cb41440f150b52919d8f61dbecf4ffa2 422 Gene3D G3DSA:3.90.1150.60 22 415 4.3E-180 T 11-10-2018 Clos_2559 34f180dcb63b7fb3d62ca00d692b2358 134 Gene3D G3DSA:1.20.5.440 90 134 2.7E-17 T 11-10-2018 Clos_2559 34f180dcb63b7fb3d62ca00d692b2358 134 Gene3D G3DSA:2.60.15.10 2 89 4.5E-27 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2559 34f180dcb63b7fb3d62ca00d692b2358 134 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 131 3.9E-33 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2559 34f180dcb63b7fb3d62ca00d692b2358 134 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 130 21.537 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2559 34f180dcb63b7fb3d62ca00d692b2358 134 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 87 6.0E-16 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2559 34f180dcb63b7fb3d62ca00d692b2358 134 SUPERFAMILY SSF46604 87 131 1.86E-9 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2559 34f180dcb63b7fb3d62ca00d692b2358 134 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 2.2E-24 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2559 34f180dcb63b7fb3d62ca00d692b2358 134 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 131 3.6E-17 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Clos_2559 34f180dcb63b7fb3d62ca00d692b2358 134 SUPERFAMILY SSF51344 4 85 5.36E-21 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2797 43ac6124c3665349e2fb8f2c72a06a33 447 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 11 442 2.1E-177 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Clos_2797 43ac6124c3665349e2fb8f2c72a06a33 447 Gene3D G3DSA:1.10.860.10 5 167 3.4E-57 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Clos_2797 43ac6124c3665349e2fb8f2c72a06a33 447 Pfam PF03796 DnaB-like helicase C terminal domain 186 439 2.7E-111 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Clos_2797 43ac6124c3665349e2fb8f2c72a06a33 447 Gene3D G3DSA:3.40.50.300 168 446 1.7E-109 T 11-10-2018 Clos_2797 43ac6124c3665349e2fb8f2c72a06a33 447 SUPERFAMILY SSF48024 9 121 1.26E-37 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Clos_2797 43ac6124c3665349e2fb8f2c72a06a33 447 SUPERFAMILY SSF52540 184 432 1.04E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2797 43ac6124c3665349e2fb8f2c72a06a33 447 Pfam PF00772 DnaB-like helicase N terminal domain 11 111 7.6E-35 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Gene3D G3DSA:3.30.70.870 291 372 5.5E-36 T 11-10-2018 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Pfam PF00009 Elongation factor Tu GTP binding domain 7 187 1.1E-54 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Gene3D G3DSA:3.30.70.2570 485 559 6.4E-35 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Gene3D G3DSA:3.30.70.3380 373 483 5.8E-42 T 11-10-2018 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Pfam PF00679 Elongation factor G C-terminus 404 491 7.9E-25 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Pfam PF06421 GTP-binding protein LepA C-terminus 493 599 2.2E-51 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 SMART SM00838 403 491 0.0011 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 TIGRFAM TIGR01393 lepA: elongation factor 4 7 601 0.0 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 SUPERFAMILY SSF52540 5 210 2.41E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 SUPERFAMILY SSF50447 171 293 2.83E-31 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Gene3D G3DSA:2.40.30.10 191 290 6.1E-37 T 11-10-2018 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Hamap MF_00071 Elongation factor 4 [lepA]. 1 602 307.809 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Gene3D G3DSA:3.40.50.300 5 190 6.8E-75 T 11-10-2018 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 SUPERFAMILY SSF54980 297 375 1.33E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 Pfam PF03144 Elongation factor Tu domain 2 210 280 5.1E-12 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 PRINTS PR00315 GTP-binding elongation factor signature 79 89 7.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 PRINTS PR00315 GTP-binding elongation factor signature 11 24 7.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 PRINTS PR00315 GTP-binding elongation factor signature 95 106 7.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 PRINTS PR00315 GTP-binding elongation factor signature 54 62 7.8E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 179 3.8E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_1229 b9fbe7c2fb56a8f142b9ec1f6e776755 602 SUPERFAMILY SSF54980 404 499 6.71E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_1233 e7eee379f0f589e17c468451283206d5 613 Pfam PF00012 Hsp70 protein 4 576 1.7E-250 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 SUPERFAMILY SSF53067 163 354 1.1E-66 T 11-10-2018 Clos_1233 e7eee379f0f589e17c468451283206d5 613 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 PRINTS PR00301 70kDa heat shock protein signature 441 457 3.0E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 PRINTS PR00301 70kDa heat shock protein signature 174 184 3.0E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 PRINTS PR00301 70kDa heat shock protein signature 306 322 3.0E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 PRINTS PR00301 70kDa heat shock protein signature 114 134 3.0E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 PRINTS PR00301 70kDa heat shock protein signature 337 357 3.0E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.0E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 PRINTS PR00301 70kDa heat shock protein signature 360 379 3.0E-81 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 576 3.7E-291 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Clos_1233 e7eee379f0f589e17c468451283206d5 613 Gene3D G3DSA:3.90.640.10 200 281 1.0E-144 T 11-10-2018 Clos_1233 e7eee379f0f589e17c468451283206d5 613 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 SUPERFAMILY SSF100920 356 512 1.11E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 Gene3D G3DSA:3.30.420.40 161 339 1.0E-144 T 11-10-2018 Clos_1233 e7eee379f0f589e17c468451283206d5 613 Gene3D G3DSA:1.20.1270.10 496 579 1.4E-23 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 SUPERFAMILY SSF53067 1 159 3.52E-59 T 11-10-2018 Clos_1233 e7eee379f0f589e17c468451283206d5 613 Gene3D G3DSA:2.60.34.10 355 495 5.6E-64 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 SUPERFAMILY SSF100934 479 576 1.82E-13 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Clos_1233 e7eee379f0f589e17c468451283206d5 613 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 608 37.619 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Clos_1233 e7eee379f0f589e17c468451283206d5 613 Gene3D G3DSA:3.30.420.40 5 349 1.0E-144 T 11-10-2018 Clos_2722 393107e9822f7d44f97d2aeebab93f2f 417 SUPERFAMILY SSF55729 4 280 3.94E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2722 393107e9822f7d44f97d2aeebab93f2f 417 Gene3D G3DSA:3.40.630.30 138 411 1.2E-89 T 11-10-2018 Clos_2722 393107e9822f7d44f97d2aeebab93f2f 417 Pfam PF13530 Sterol carrier protein domain 182 413 1.4E-34 T 11-10-2018 IPR025559 Enhanced intracellular survival protein domain Clos_2722 393107e9822f7d44f97d2aeebab93f2f 417 Pfam PF13527 Acetyltransferase (GNAT) domain 4 137 1.1E-25 T 11-10-2018 Clos_2722 393107e9822f7d44f97d2aeebab93f2f 417 Gene3D G3DSA:3.30.1050.10 308 406 1.2E-89 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Clos_2722 393107e9822f7d44f97d2aeebab93f2f 417 Gene3D G3DSA:3.40.630.30 27 307 1.2E-89 T 11-10-2018 Clos_2722 393107e9822f7d44f97d2aeebab93f2f 417 SUPERFAMILY SSF55718 314 409 2.19E-17 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Clos_2306 ec4d5537a40cc85574d44360cf1d70e5 367 Gene3D G3DSA:1.20.1090.10 159 367 1.7E-54 T 11-10-2018 Clos_2306 ec4d5537a40cc85574d44360cf1d70e5 367 PIRSF PIRSF000112 1 357 3.2E-92 T 11-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 Clos_2306 ec4d5537a40cc85574d44360cf1d70e5 367 Gene3D G3DSA:3.40.50.1970 7 158 3.6E-39 T 11-10-2018 Clos_2306 ec4d5537a40cc85574d44360cf1d70e5 367 SUPERFAMILY SSF56796 7 349 2.49E-63 T 11-10-2018 Clos_2306 ec4d5537a40cc85574d44360cf1d70e5 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 343 2.7E-50 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Clos_1736 43564a4ea7897516c966155056d7dd33 467 Gene3D G3DSA:3.90.1150.110 10 455 9.3E-176 T 11-10-2018 Clos_1736 43564a4ea7897516c966155056d7dd33 467 Gene3D G3DSA:3.40.640.10 98 362 9.3E-176 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1736 43564a4ea7897516c966155056d7dd33 467 Pfam PF03841 L-seryl-tRNA selenium transferase 86 450 9.4E-162 T 11-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Clos_1736 43564a4ea7897516c966155056d7dd33 467 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 8 463 2.8E-187 T 11-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Clos_1736 43564a4ea7897516c966155056d7dd33 467 Pfam PF12390 Selenocysteine synthase N terminal 7 46 3.0E-8 T 11-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Clos_1736 43564a4ea7897516c966155056d7dd33 467 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 467 207.509 T 11-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Clos_1736 43564a4ea7897516c966155056d7dd33 467 SUPERFAMILY SSF53383 76 466 5.02E-50 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2764 cbd242f97dd75093385ec8c4bf68e5f3 204 Pfam PF04542 Sigma-70 region 2 46 109 1.2E-9 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2764 cbd242f97dd75093385ec8c4bf68e5f3 204 SUPERFAMILY SSF88659 136 199 3.18E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_2764 cbd242f97dd75093385ec8c4bf68e5f3 204 SUPERFAMILY SSF88946 39 113 2.94E-14 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2764 cbd242f97dd75093385ec8c4bf68e5f3 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 41 195 1.6E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_2764 cbd242f97dd75093385ec8c4bf68e5f3 204 Gene3D G3DSA:1.10.1740.10 31 111 2.8E-15 T 11-10-2018 Clos_2764 cbd242f97dd75093385ec8c4bf68e5f3 204 Pfam PF08281 Sigma-70, region 4 151 193 1.7E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_2764 cbd242f97dd75093385ec8c4bf68e5f3 204 Gene3D G3DSA:1.10.10.10 125 201 2.0E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0427 6d1e2a223316da151069f936353df2a0 448 Gene3D G3DSA:3.30.565.10 291 438 8.3E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0427 6d1e2a223316da151069f936353df2a0 448 SUPERFAMILY SSF55890 240 366 2.75E-12 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Clos_0427 6d1e2a223316da151069f936353df2a0 448 Pfam PF14501 GHKL domain 334 438 3.3E-24 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Clos_0427 6d1e2a223316da151069f936353df2a0 448 Gene3D G3DSA:1.10.287.130 227 290 4.1E-6 T 11-10-2018 Clos_0427 6d1e2a223316da151069f936353df2a0 448 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 238 295 5.6E-14 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain Clos_0460 34d09bddd5ddc4374deb6e45735c1188 167 Gene3D G3DSA:2.30.30.840 1 62 1.7E-26 T 11-10-2018 Clos_0460 34d09bddd5ddc4374deb6e45735c1188 167 Gene3D G3DSA:1.20.58.1290 63 160 6.0E-36 T 11-10-2018 Clos_0460 34d09bddd5ddc4374deb6e45735c1188 167 SMART SM01058 1 111 2.5E-34 T 11-10-2018 IPR003711 CarD-like/TRCF domain Clos_0460 34d09bddd5ddc4374deb6e45735c1188 167 Pfam PF02559 CarD-like/TRCF domain 2 109 5.4E-20 T 11-10-2018 IPR003711 CarD-like/TRCF domain Clos_0460 34d09bddd5ddc4374deb6e45735c1188 167 SUPERFAMILY SSF141259 1 63 1.44E-14 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily Clos_0470 668a70ff01cc21d9935b36c408b9ebb6 149 Gene3D G3DSA:1.10.1520.10 14 147 2.1E-43 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Clos_0470 668a70ff01cc21d9935b36c408b9ebb6 149 SUPERFAMILY SSF69065 20 137 5.58E-35 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Clos_0470 668a70ff01cc21d9935b36c408b9ebb6 149 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 17 141 29.478 T 11-10-2018 IPR008226 Mini-ribonuclease 3 family Clos_0470 668a70ff01cc21d9935b36c408b9ebb6 149 PIRSF PIRSF005520 11 145 6.6E-48 T 11-10-2018 IPR008226 Mini-ribonuclease 3 family Clos_0470 668a70ff01cc21d9935b36c408b9ebb6 149 Pfam PF00636 Ribonuclease III domain 27 121 1.3E-12 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Clos_0315 8f9328cf1e73091796c80e5a3e8fd366 372 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 371 9.1E-75 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Clos_0315 8f9328cf1e73091796c80e5a3e8fd366 372 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 203 369 3.9E-28 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Clos_0315 8f9328cf1e73091796c80e5a3e8fd366 372 Gene3D G3DSA:3.30.300.210 220 371 2.2E-24 T 11-10-2018 IPR038501 Spore germination GerAC superfamily Clos_1326 444e74f26d52c6b7544a9861de61a6c7 410 Gene3D G3DSA:3.40.50.720 265 392 3.3E-38 T 11-10-2018 Clos_1326 444e74f26d52c6b7544a9861de61a6c7 410 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 4 245 3.3E-49 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Clos_1326 444e74f26d52c6b7544a9861de61a6c7 410 SUPERFAMILY SSF51735 265 375 4.11E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1326 444e74f26d52c6b7544a9861de61a6c7 410 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 266 410 9.5E-32 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Clos_1326 444e74f26d52c6b7544a9861de61a6c7 410 SUPERFAMILY SSF75615 370 410 1.83E-5 T 11-10-2018 Clos_1326 444e74f26d52c6b7544a9861de61a6c7 410 Pfam PF13241 Putative NAD(P)-binding 268 377 3.2E-28 T 11-10-2018 Clos_1326 444e74f26d52c6b7544a9861de61a6c7 410 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 4 245 8.3E-70 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Clos_0510 3eb9cb717058962ab0627f1c53859f80 59 SUPERFAMILY SSF55129 1 59 1.44E-18 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Clos_0510 3eb9cb717058962ab0627f1c53859f80 59 Pfam PF00327 Ribosomal protein L30p/L7e 6 54 7.8E-18 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Clos_0510 3eb9cb717058962ab0627f1c53859f80 59 Gene3D G3DSA:3.30.1390.20 1 59 5.8E-23 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Clos_0510 3eb9cb717058962ab0627f1c53859f80 59 PIRSF PIRSF002211 1 59 1.5E-25 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0510 3eb9cb717058962ab0627f1c53859f80 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 11-10-2018 IPR018038 Ribosomal protein L30, conserved site Clos_0510 3eb9cb717058962ab0627f1c53859f80 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 58 1.8E-23 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0510 3eb9cb717058962ab0627f1c53859f80 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 18.169 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0251 1dc2a9d37cec68e3d57015c7be5648de 439 SUPERFAMILY SSF82171 58 430 3.92E-8 T 11-10-2018 Clos_2593 57f8eeae788b6529e349947b1ce90ced 213 SUPERFAMILY SSF161098 10 198 1.14E-43 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2593 57f8eeae788b6529e349947b1ce90ced 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 203 3.0E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2593 57f8eeae788b6529e349947b1ce90ced 213 Gene3D G3DSA:1.10.3720.10 1 211 1.6E-50 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2593 57f8eeae788b6529e349947b1ce90ced 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 105 1.1E-29 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Clos_0655 78cb227e07686937112ed79cd42d4620 270 Hamap MF_00548 Zinc transporter ZupT [zupT]. 8 270 35.549 T 11-10-2018 IPR023498 Zinc transporter ZupT Clos_0655 78cb227e07686937112ed79cd42d4620 270 Pfam PF02535 ZIP Zinc transporter 106 264 4.9E-29 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Clos_1844 569798b2c2a6777522e806d52605c5c7 137 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 53 128 9.3E-12 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Clos_1844 569798b2c2a6777522e806d52605c5c7 137 SUPERFAMILY SSF49329 53 130 6.41E-16 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Clos_1844 569798b2c2a6777522e806d52605c5c7 137 Gene3D G3DSA:2.60.40.200 37 132 2.3E-15 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Clos_1773 a9d12e61567b76a73f12422bc55518a3 180 PIRSF PIRSF006091 1 180 4.8E-44 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Clos_1773 a9d12e61567b76a73f12422bc55518a3 180 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 176 2.4E-35 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Clos_1773 a9d12e61567b76a73f12422bc55518a3 180 SMART SM00900 92 175 3.9E-19 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_1773 a9d12e61567b76a73f12422bc55518a3 180 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 1 177 23.434 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Clos_1773 a9d12e61567b76a73f12422bc55518a3 180 Pfam PF04205 FMN-binding domain 92 173 4.7E-18 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 220 288 2.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 442 2.1E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 Gene3D G3DSA:1.20.120.620 1 86 1.7E-18 T 11-10-2018 IPR038318 KdpD, transmembrane domain superfamily Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 Pfam PF13493 Domain of unknown function (DUF4118) 7 90 3.9E-21 T 11-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 9.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 9.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 9.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 9.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 SUPERFAMILY SSF47384 213 289 9.81E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 Gene3D G3DSA:3.30.565.10 290 446 2.4E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 Gene3D G3DSA:1.10.287.130 204 289 5.8E-16 T 11-10-2018 Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 SMART SM00388 220 288 2.0E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 SMART SM00387 332 444 6.6E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0860 cb9916ba9cd88a1d5e7cee1b969e5fbe 446 SUPERFAMILY SSF55874 277 442 6.94E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2201 f6feea00e82e450e693b09509dd2bc6d 73 Pfam PF08984 Domain of unknown function (DUF1858) 4 59 3.0E-19 T 11-10-2018 IPR015077 Domain of unknown function DUF1858 Clos_2201 f6feea00e82e450e693b09509dd2bc6d 73 SUPERFAMILY SSF140683 1 69 9.68E-21 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Clos_2201 f6feea00e82e450e693b09509dd2bc6d 73 Gene3D G3DSA:1.10.3910.10 1 73 1.5E-28 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Clos_0482 76cc68458fd68b13c0e53b260dc4f5f0 167 SUPERFAMILY SSF160369 6 160 6.15E-52 T 11-10-2018 Clos_0482 76cc68458fd68b13c0e53b260dc4f5f0 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 27.029 T 11-10-2018 IPR022973 Ribosomal protein L10 Clos_0482 76cc68458fd68b13c0e53b260dc4f5f0 167 Gene3D G3DSA:3.30.70.1730 6 133 1.3E-41 T 11-10-2018 Clos_0482 76cc68458fd68b13c0e53b260dc4f5f0 167 Pfam PF00466 Ribosomal protein L10 8 101 5.7E-29 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Clos_0482 76cc68458fd68b13c0e53b260dc4f5f0 167 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 19 141 0.001 T 11-10-2018 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 9 157 3.2E-54 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 SUPERFAMILY SSF46557 6 79 8.5E-24 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 PIRSF PIRSF006092 1 159 6.8E-51 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 123 139 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 Gene3D G3DSA:3.10.50.30 80 159 1.8E-26 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 Gene3D G3DSA:1.10.287.180 5 78 9.4E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 30.403 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 158 5.5E-26 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 4.3E-28 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Clos_0449 39d05936e1b8dff1d7dddd74e0bad6be 159 SUPERFAMILY SSF54534 84 158 1.57E-21 T 11-10-2018 Clos_2658 9dc3c043064cd7202672270772437f59 178 SUPERFAMILY SSF110455 1 114 3.66E-34 T 11-10-2018 Clos_2658 9dc3c043064cd7202672270772437f59 178 Hamap MF_01469 Ribonuclease M5 [rnmV]. 2 175 32.011 T 11-10-2018 IPR004466 Ribonuclease M5 GO:0043822 Clos_2658 9dc3c043064cd7202672270772437f59 178 SMART SM00493 3 76 1.3E-8 T 11-10-2018 IPR006171 TOPRIM domain Clos_2658 9dc3c043064cd7202672270772437f59 178 Gene3D G3DSA:3.40.1360.20 1 116 1.1E-23 T 11-10-2018 Clos_2658 9dc3c043064cd7202672270772437f59 178 Pfam PF13331 Domain of unknown function (DUF4093) 89 173 1.8E-26 T 11-10-2018 IPR025156 Ribonuclease M5, C-terminal domain Clos_2658 9dc3c043064cd7202672270772437f59 178 Pfam PF13662 Toprim domain 3 63 1.0E-5 T 11-10-2018 IPR006171 TOPRIM domain Clos_2658 9dc3c043064cd7202672270772437f59 178 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 174 4.1E-47 T 11-10-2018 IPR004466 Ribonuclease M5 GO:0043822 Clos_0267 1f23be272fb8fb646c9b50bcfa9a2348 311 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 36 308 2.7E-61 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Clos_0267 1f23be272fb8fb646c9b50bcfa9a2348 311 SUPERFAMILY SSF161098 41 301 1.03E-40 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0267 1f23be272fb8fb646c9b50bcfa9a2348 311 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 34 308 1.6E-89 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Clos_0267 1f23be272fb8fb646c9b50bcfa9a2348 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 1.2E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_0267 1f23be272fb8fb646c9b50bcfa9a2348 311 Gene3D G3DSA:1.10.3720.10 88 310 7.5E-39 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1764 955512bacd11387c9b30c5215db38b46 280 PIRSF PIRSF038471 3 280 1.8E-68 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Clos_1764 955512bacd11387c9b30c5215db38b46 280 Pfam PF04085 rod shape-determining protein MreC 129 273 1.1E-38 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Clos_1764 955512bacd11387c9b30c5215db38b46 280 Gene3D G3DSA:2.40.10.350 185 261 1.3E-39 T 11-10-2018 Clos_1764 955512bacd11387c9b30c5215db38b46 280 Gene3D G3DSA:2.40.10.340 126 272 1.3E-39 T 11-10-2018 Clos_1764 955512bacd11387c9b30c5215db38b46 280 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 12 276 1.1E-35 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Clos_2101 91ff52c6ae9e7f79423ed7fbbb68183f 116 SMART SM00900 42 116 2.6E-20 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2101 91ff52c6ae9e7f79423ed7fbbb68183f 116 Gene3D G3DSA:3.90.1010.20 64 116 6.2E-8 T 11-10-2018 Clos_2101 91ff52c6ae9e7f79423ed7fbbb68183f 116 Pfam PF04205 FMN-binding domain 42 114 3.0E-19 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_1412 6cf4e1a3a1398290cb440439ddbb7f1f 232 Gene3D G3DSA:3.40.50.1580 1 232 1.4E-68 T 11-10-2018 Clos_1412 6cf4e1a3a1398290cb440439ddbb7f1f 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 232 3.3E-57 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Clos_1412 6cf4e1a3a1398290cb440439ddbb7f1f 232 SUPERFAMILY SSF53167 3 230 4.45E-65 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Clos_1412 6cf4e1a3a1398290cb440439ddbb7f1f 232 Pfam PF01048 Phosphorylase superfamily 3 229 6.5E-51 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Clos_2140 c2d7ad770d2536ce10b69a410e7dcbd8 700 Gene3D G3DSA:1.10.569.10 282 457 1.1E-5 T 11-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Clos_2140 c2d7ad770d2536ce10b69a410e7dcbd8 700 Gene3D G3DSA:1.10.599.10 458 688 7.4E-22 T 11-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Clos_2140 c2d7ad770d2536ce10b69a410e7dcbd8 700 Gene3D G3DSA:3.60.9.10 4 211 1.0E-66 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Clos_2140 c2d7ad770d2536ce10b69a410e7dcbd8 700 SUPERFAMILY SSF56228 5 211 3.01E-54 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Clos_2140 c2d7ad770d2536ce10b69a410e7dcbd8 700 SUPERFAMILY SSF48310 255 699 1.09E-54 T 11-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Clos_2140 c2d7ad770d2536ce10b69a410e7dcbd8 700 SMART SM00790 7 207 1.5E-73 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Clos_2140 c2d7ad770d2536ce10b69a410e7dcbd8 700 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 9 206 1.2E-61 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Clos_2140 c2d7ad770d2536ce10b69a410e7dcbd8 700 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 231 685 1.6E-73 T 11-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 143 226 2.4E-39 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 PIRSF PIRSF006205 1 381 1.1E-160 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 SUPERFAMILY SSF69055 288 380 1.1E-31 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 Gene3D G3DSA:1.10.1740.10 299 381 7.3E-27 T 11-10-2018 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 SUPERFAMILY SSF51735 2 147 4.32E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 129 2.0E-44 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 SUPERFAMILY SSF55347 123 261 3.6E-59 T 11-10-2018 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 378 4.5E-159 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 374 2.2E-41 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 Gene3D G3DSA:3.40.50.720 1 147 3.5E-53 T 11-10-2018 Clos_1519 1ad504a110a283cab7e8dba40c69e398 381 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 379 47.307 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Clos_2765 6026065f83fc86bd52a5d32d0dc4fefa 347 Gene3D G3DSA:1.10.1660.10 1 139 5.1E-25 T 11-10-2018 Clos_2765 6026065f83fc86bd52a5d32d0dc4fefa 347 SUPERFAMILY SSF53335 142 341 2.22E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2765 6026065f83fc86bd52a5d32d0dc4fefa 347 Pfam PF13649 Methyltransferase domain 185 275 1.1E-13 T 11-10-2018 Clos_2765 6026065f83fc86bd52a5d32d0dc4fefa 347 Pfam PF13411 MerR HTH family regulatory protein 2 68 2.1E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2765 6026065f83fc86bd52a5d32d0dc4fefa 347 SMART SM00422 1 69 1.0E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2765 6026065f83fc86bd52a5d32d0dc4fefa 347 Gene3D G3DSA:3.40.50.150 160 346 2.9E-33 T 11-10-2018 Clos_2765 6026065f83fc86bd52a5d32d0dc4fefa 347 SUPERFAMILY SSF46955 1 108 2.67E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 Gene3D G3DSA:3.30.565.10 278 430 2.5E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 Gene3D G3DSA:1.10.287.130 207 277 5.1E-19 T 11-10-2018 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 277 1.5E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 432 1.5E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 SMART SM00388 212 278 6.4E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 SUPERFAMILY SSF158472 165 208 1.27E-10 T 11-10-2018 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 SMART SM00387 322 432 3.2E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 Pfam PF00672 HAMP domain 167 207 2.4E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 Gene3D G3DSA:1.10.8.500 162 206 1.1E-10 T 11-10-2018 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 1.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 1.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 1.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 1.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 SUPERFAMILY SSF55874 268 430 1.27E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 SMART SM00304 159 211 9.3E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_1203 12b833fb53f5ec55c85cdb6d7c096bf1 437 SUPERFAMILY SSF47384 195 278 1.12E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0984 9ea91daef6780b22d11fb8a21c401b9c 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 88 106 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Clos_0984 9ea91daef6780b22d11fb8a21c401b9c 321 Pfam PF01207 Dihydrouridine synthase (Dus) 5 309 1.4E-35 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Clos_0984 9ea91daef6780b22d11fb8a21c401b9c 321 SUPERFAMILY SSF51395 1 307 5.57E-44 T 11-10-2018 Clos_0984 9ea91daef6780b22d11fb8a21c401b9c 321 PIRSF PIRSF006621 1 316 7.4E-59 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Clos_0984 9ea91daef6780b22d11fb8a21c401b9c 321 Gene3D G3DSA:3.20.20.70 1 236 4.8E-57 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 SUPERFAMILY SSF46785 260 332 4.9E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 Gene3D G3DSA:1.10.8.60 186 260 1.2E-32 T 11-10-2018 Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 335 171.248 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 264 331 2.0E-30 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 2.6E-34 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 7.0E-146 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 SUPERFAMILY SSF52540 24 255 3.39E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 239 3.5E-119 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 SMART SM00382 55 186 5.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 Gene3D G3DSA:1.10.10.10 261 335 2.8E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1725 f92be3db0a2f52ed20b00afc20d106a3 335 Gene3D G3DSA:3.40.50.300 24 185 8.9E-41 T 11-10-2018 Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 Gene3D G3DSA:3.40.50.300 5 224 6.3E-67 T 11-10-2018 Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 Pfam PF00005 ABC transporter 22 164 1.6E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 Gene3D G3DSA:2.40.50.940 225 342 6.6E-8 T 11-10-2018 Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 37 317 1.7E-109 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 SMART SM00382 31 214 7.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 SUPERFAMILY SSF52540 5 246 5.61E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 Pfam PF08402 TOBE domain 275 314 2.1E-4 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 SUPERFAMILY SSF50331 239 344 4.7E-12 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 Gene3D G3DSA:2.40.50.140 282 335 6.6E-8 T 11-10-2018 Clos_2540 81bd9007e48b9597645014cb33f7b17f 347 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0852 4e4b8305776ad06005da20c269c68ff0 291 SUPERFAMILY SSF51182 14 289 1.11E-74 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Clos_0852 4e4b8305776ad06005da20c269c68ff0 291 Pfam PF05726 Pirin C-terminal cupin domain 188 287 3.0E-23 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Clos_0852 4e4b8305776ad06005da20c269c68ff0 291 Gene3D G3DSA:2.60.120.10 19 282 4.0E-78 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_0852 4e4b8305776ad06005da20c269c68ff0 291 PIRSF PIRSF006232 4 290 5.1E-84 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Clos_0852 4e4b8305776ad06005da20c269c68ff0 291 Gene3D G3DSA:2.60.120.10 152 256 4.0E-78 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_0852 4e4b8305776ad06005da20c269c68ff0 291 Pfam PF02678 Pirin 22 130 6.1E-32 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 226 354 5.6E-20 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 Gene3D G3DSA:3.90.79.10 1 196 1.6E-41 T 11-10-2018 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 SUPERFAMILY SSF55811 411 532 8.39E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 Pfam PF00633 Helix-hairpin-helix motif 290 318 1.9E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 197 456 1.2E-97 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 Pfam PF00293 NUDIX domain 44 167 6.0E-8 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 SUPERFAMILY SSF55811 42 185 1.62E-15 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 Pfam PF14815 NUDIX domain 425 531 2.1E-23 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 SMART SM00478 229 380 4.4E-49 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 SUPERFAMILY SSF48150 194 416 3.93E-70 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 Gene3D G3DSA:1.10.1670.10 200 403 1.3E-86 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 Gene3D G3DSA:3.90.79.10 416 536 1.4E-16 T 11-10-2018 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 Gene3D G3DSA:1.10.340.30 211 322 1.3E-86 T 11-10-2018 Clos_2291 740a1fcc197c7ba19688d663e0f75a05 544 ProSitePatterns PS01155 Endonuclease III family signature. 292 321 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 Gene3D G3DSA:3.40.50.140 14 165 4.0E-53 T 11-10-2018 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 Pfam PF01751 Toprim domain 16 145 5.5E-16 T 11-10-2018 IPR006171 TOPRIM domain Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 SMART SM00437 273 560 6.1E-86 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 Gene3D G3DSA:1.10.290.10 282 412 1.9E-146 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 Pfam PF01131 DNA topoisomerase 164 594 6.6E-116 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 TIGRFAM TIGR01056 topB: DNA topoisomerase III 14 736 4.8E-263 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 523 537 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 111 124 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 316 325 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 398 414 1.6E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 Gene3D G3DSA:2.70.20.10 221 488 1.9E-146 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 SMART SM00493 14 137 5.1E-19 T 11-10-2018 IPR006171 TOPRIM domain Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 SMART SM00436 137 227 2.3E-36 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 Gene3D G3DSA:1.10.460.10 171 604 1.9E-146 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 Hamap MF_00953 DNA topoisomerase 3 [topB]. 14 649 64.319 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 SUPERFAMILY SSF56712 14 610 7.06E-175 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Clos_1034 7b7411eb6a1f82ddeb0fc6b789adb554 739 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 310 325 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Clos_1256 14f93b13075a63936a647c036dadab99 212 SMART SM00116 86 133 11.0 T 11-10-2018 IPR000644 CBS domain Clos_1256 14f93b13075a63936a647c036dadab99 212 SMART SM00116 152 207 0.23 T 11-10-2018 IPR000644 CBS domain Clos_1256 14f93b13075a63936a647c036dadab99 212 Gene3D G3DSA:3.10.580.10 64 212 2.8E-47 T 11-10-2018 Clos_1256 14f93b13075a63936a647c036dadab99 212 SUPERFAMILY SSF46785 5 80 9.1E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1256 14f93b13075a63936a647c036dadab99 212 Pfam PF00571 CBS domain 146 206 4.9E-7 T 11-10-2018 IPR000644 CBS domain Clos_1256 14f93b13075a63936a647c036dadab99 212 Pfam PF00571 CBS domain 80 133 1.4E-4 T 11-10-2018 IPR000644 CBS domain Clos_1256 14f93b13075a63936a647c036dadab99 212 Pfam PF08279 HTH domain 9 61 9.5E-13 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Clos_1256 14f93b13075a63936a647c036dadab99 212 Gene3D G3DSA:1.10.10.10 2 63 7.9E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1256 14f93b13075a63936a647c036dadab99 212 SUPERFAMILY SSF54631 65 209 1.55E-21 T 11-10-2018 Clos_1256 14f93b13075a63936a647c036dadab99 212 PIRSF PIRSF026546 4 212 1.0E-90 T 11-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS Clos_1821 e20591a97f6081322a373a2f6c1ee0ba 123 SMART SM00530 6 61 8.4E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1821 e20591a97f6081322a373a2f6c1ee0ba 123 SUPERFAMILY SSF47413 1 65 3.6E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1821 e20591a97f6081322a373a2f6c1ee0ba 123 Pfam PF01381 Helix-turn-helix 7 61 5.8E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1821 e20591a97f6081322a373a2f6c1ee0ba 123 Gene3D G3DSA:1.10.260.40 3 121 8.2E-23 T 11-10-2018 Clos_0861 937bde197eb47fec2f5b6268f8673105 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 6.4E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0861 937bde197eb47fec2f5b6268f8673105 231 SMART SM00448 5 115 6.2E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0861 937bde197eb47fec2f5b6268f8673105 231 Pfam PF00072 Response regulator receiver domain 7 116 2.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0861 937bde197eb47fec2f5b6268f8673105 231 Gene3D G3DSA:3.40.50.2300 1 124 9.1E-35 T 11-10-2018 Clos_0861 937bde197eb47fec2f5b6268f8673105 231 SMART SM00862 152 228 4.1E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0861 937bde197eb47fec2f5b6268f8673105 231 SUPERFAMILY SSF52172 3 184 2.72E-36 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0861 937bde197eb47fec2f5b6268f8673105 231 Gene3D G3DSA:1.10.10.10 127 231 3.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0138 754e2615b3e12a6b4a1589ac0514056e 243 Gene3D G3DSA:3.60.15.10 2 235 3.4E-31 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_0138 754e2615b3e12a6b4a1589ac0514056e 243 SUPERFAMILY SSF56281 8 211 2.44E-15 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_0138 754e2615b3e12a6b4a1589ac0514056e 243 Pfam PF13483 Beta-lactamase superfamily domain 9 144 6.2E-9 T 11-10-2018 Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 101 1.3E-20 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 104 237 6.1E-42 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 238 29.421 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 PIRSF PIRSF000161 1 240 1.4E-72 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 Gene3D G3DSA:3.40.50.720 4 235 3.4E-74 T 11-10-2018 Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 41 237 7.6E-63 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 SUPERFAMILY SSF55347 103 209 2.18E-27 T 11-10-2018 Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 Gene3D G3DSA:3.30.360.10 103 207 3.4E-74 T 11-10-2018 Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 SUPERFAMILY SSF51735 2 239 7.15E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1164 644bc8e541873ae9f0cfb67e8288ee75 241 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 126 143 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_2274 1b1e0f0f40948ce1b57350db53348d91 91 SUPERFAMILY SSF47598 4 48 2.37E-9 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Clos_2274 1b1e0f0f40948ce1b57350db53348d91 91 Gene3D G3DSA:1.10.1220.10 1 88 1.0E-29 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Clos_2274 1b1e0f0f40948ce1b57350db53348d91 91 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 42 4.7E-7 T 11-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Clos_2307 77a8db63186d4277a707fd444752426a 596 SMART SM00900 47 121 2.7E-18 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2307 77a8db63186d4277a707fd444752426a 596 SUPERFAMILY SSF56425 412 536 8.37E-21 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_2307 77a8db63186d4277a707fd444752426a 596 SUPERFAMILY SSF51905 133 594 3.79E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2307 77a8db63186d4277a707fd444752426a 596 Pfam PF00890 FAD binding domain 146 565 6.4E-58 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_2307 77a8db63186d4277a707fd444752426a 596 Gene3D G3DSA:3.90.700.10 390 532 1.3E-111 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_2307 77a8db63186d4277a707fd444752426a 596 Gene3D G3DSA:3.50.50.60 145 591 1.3E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2307 77a8db63186d4277a707fd444752426a 596 Pfam PF04205 FMN-binding domain 47 118 2.0E-13 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 SUPERFAMILY SSF140990 416 605 8.24E-68 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 113 603 6.3E-205 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 Gene3D G3DSA:1.10.8.60 337 410 1.8E-22 T 11-10-2018 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 2.8E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 SUPERFAMILY SSF52540 162 430 6.74E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 Gene3D G3DSA:2.40.50.920 35 113 2.1E-8 T 11-10-2018 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 Gene3D G3DSA:3.40.50.300 149 336 6.5E-70 T 11-10-2018 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 9 615 34.22 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 ProSitePatterns PS00674 AAA-protein family signature. 305 323 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 Pfam PF06480 FtsH Extracellular 12 99 6.1E-6 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 SMART SM00382 197 337 8.5E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 Gene3D G3DSA:1.20.58.760 411 611 3.2E-68 T 11-10-2018 Clos_2310 1e00283f356f1af0a2aa46d91b558401 623 Pfam PF01434 Peptidase family M41 396 602 4.0E-69 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Clos_2685 ac77b4a6cf0b91d648853ce47c2b495f 285 Gene3D G3DSA:3.40.190.10 137 227 5.7E-76 T 11-10-2018 Clos_2685 ac77b4a6cf0b91d648853ce47c2b495f 285 SUPERFAMILY SSF53850 7 263 3.55E-57 T 11-10-2018 Clos_2685 ac77b4a6cf0b91d648853ce47c2b495f 285 Gene3D G3DSA:3.40.190.10 39 262 5.7E-76 T 11-10-2018 Clos_2685 ac77b4a6cf0b91d648853ce47c2b495f 285 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 262 7.4E-48 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_2685 ac77b4a6cf0b91d648853ce47c2b495f 285 SMART SM00062 47 269 1.1E-70 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_0038 fcc85425d725b7a44d9f614b55815955 615 Gene3D G3DSA:1.20.1560.10 3 353 5.4E-14 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0038 fcc85425d725b7a44d9f614b55815955 615 SMART SM00382 397 585 2.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0038 fcc85425d725b7a44d9f614b55815955 615 SUPERFAMILY SSF90123 14 334 9.16E-21 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0038 fcc85425d725b7a44d9f614b55815955 615 SUPERFAMILY SSF52540 367 610 3.03E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0038 fcc85425d725b7a44d9f614b55815955 615 Pfam PF00005 ABC transporter 388 539 9.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0038 fcc85425d725b7a44d9f614b55815955 615 Gene3D G3DSA:3.40.50.300 359 613 1.3E-73 T 11-10-2018 Clos_0038 fcc85425d725b7a44d9f614b55815955 615 ProSitePatterns PS00211 ABC transporters family signature. 511 525 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2148 5893564f68cf3d70874a4e611ffc69a3 257 Gene3D G3DSA:3.30.420.40 95 234 2.1E-77 T 11-10-2018 Clos_2148 5893564f68cf3d70874a4e611ffc69a3 257 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 250 2.5E-57 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Clos_2148 5893564f68cf3d70874a4e611ffc69a3 257 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 2 250 2.7E-82 T 11-10-2018 IPR008275 CoA enzyme activase Clos_2148 5893564f68cf3d70874a4e611ffc69a3 257 Gene3D G3DSA:3.30.420.40 4 250 2.1E-77 T 11-10-2018 Clos_2148 5893564f68cf3d70874a4e611ffc69a3 257 SUPERFAMILY SSF53067 3 249 3.43E-36 T 11-10-2018 Clos_1449 7099cd053d1aa1fac5dfdc7e4441a4f6 61 Pfam PF01783 Ribosomal L32p protein family 5 60 9.3E-26 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1449 7099cd053d1aa1fac5dfdc7e4441a4f6 61 SUPERFAMILY SSF57829 3 59 4.82E-22 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Clos_1449 7099cd053d1aa1fac5dfdc7e4441a4f6 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 4 59 20.874 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1449 7099cd053d1aa1fac5dfdc7e4441a4f6 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 5 59 5.5E-26 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0046 0fabd01450a0f0d1460c65370259022f 210 SUPERFAMILY SSF55729 22 197 6.52E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0046 0fabd01450a0f0d1460c65370259022f 210 Pfam PF00583 Acetyltransferase (GNAT) family 71 167 4.7E-6 T 11-10-2018 IPR000182 GNAT domain Clos_0046 0fabd01450a0f0d1460c65370259022f 210 Gene3D G3DSA:3.40.630.30 23 210 3.1E-15 T 11-10-2018 Clos_2653 f5f0a0fa13b646b3382bb7e4d24fcaad 316 Gene3D G3DSA:3.40.50.300 18 184 1.7E-43 T 11-10-2018 Clos_2653 f5f0a0fa13b646b3382bb7e4d24fcaad 316 SUPERFAMILY SSF52540 5 281 3.78E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2653 f5f0a0fa13b646b3382bb7e4d24fcaad 316 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 167 4.0E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Clos_2653 f5f0a0fa13b646b3382bb7e4d24fcaad 316 PIRSF PIRSF002849 1 311 1.8E-133 T 11-10-2018 Clos_2653 f5f0a0fa13b646b3382bb7e4d24fcaad 316 Gene3D G3DSA:1.10.8.300 198 306 1.9E-37 T 11-10-2018 Clos_1045 06893233ac073f8841345bf1f97dddb5 475 Gene3D G3DSA:3.30.479.30 63 183 6.9E-35 T 11-10-2018 Clos_1045 06893233ac073f8841345bf1f97dddb5 475 SMART SM00244 25 193 0.0013 T 11-10-2018 IPR001107 Band 7 domain Clos_1045 06893233ac073f8841345bf1f97dddb5 475 SUPERFAMILY SSF117892 54 200 9.68E-30 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Clos_1045 06893233ac073f8841345bf1f97dddb5 475 Pfam PF15975 Flotillin 347 429 1.0E-9 T 11-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 Clos_1045 06893233ac073f8841345bf1f97dddb5 475 Pfam PF01145 SPFH domain / Band 7 family 29 209 1.2E-24 T 11-10-2018 IPR001107 Band 7 domain Clos_0771 fdb6bb3cb4a6767d7b7c8300ca04a44d 283 SUPERFAMILY SSF81301 1 131 1.11E-43 T 11-10-2018 Clos_0771 fdb6bb3cb4a6767d7b7c8300ca04a44d 283 Gene3D G3DSA:3.30.460.10 9 147 3.4E-52 T 11-10-2018 Clos_0771 fdb6bb3cb4a6767d7b7c8300ca04a44d 283 Gene3D G3DSA:1.20.120.330 148 282 2.1E-48 T 11-10-2018 Clos_0771 fdb6bb3cb4a6767d7b7c8300ca04a44d 283 PIRSF PIRSF000812 1 282 3.1E-122 T 11-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase Clos_0771 fdb6bb3cb4a6767d7b7c8300ca04a44d 283 SUPERFAMILY SSF81631 136 279 5.65E-54 T 11-10-2018 Clos_0771 fdb6bb3cb4a6767d7b7c8300ca04a44d 283 Pfam PF04439 Streptomycin adenylyltransferase 1 275 1.8E-115 T 11-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase Clos_0975 b93a29a38a60bcfc3933c4d4eca8cf9e 670 Pfam PF03030 Inorganic H+ pyrophosphatase 12 654 4.1E-282 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_0975 b93a29a38a60bcfc3933c4d4eca8cf9e 670 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 5 661 2.5E-267 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_0975 b93a29a38a60bcfc3933c4d4eca8cf9e 670 PIRSF PIRSF001265 1 668 3.0E-278 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_0975 b93a29a38a60bcfc3933c4d4eca8cf9e 670 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 659 26.179 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_0160 c90a89aaf88b61b8f6be069a6f598597 181 SUPERFAMILY SSF55846 7 176 2.09E-43 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Clos_0160 c90a89aaf88b61b8f6be069a6f598597 181 Gene3D G3DSA:3.40.80.10 2 175 4.0E-46 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Clos_0160 c90a89aaf88b61b8f6be069a6f598597 181 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 30 157 8.0E-19 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Clos_0160 c90a89aaf88b61b8f6be069a6f598597 181 SMART SM00644 19 157 1.3E-5 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Clos_0160 c90a89aaf88b61b8f6be069a6f598597 181 SMART SM00701 7 151 2.2E-7 T 11-10-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 PIRSF PIRSF004862 457 515 2.2E-5 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 PIRSF PIRSF004862 1 483 1.5E-96 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 515 1.3E-67 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 Pfam PF01514 Secretory protein of YscJ/FliF family 32 222 2.7E-52 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 PRINTS PR01009 Flagellar M-ring protein signature 198 216 5.1E-13 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 PRINTS PR01009 Flagellar M-ring protein signature 269 287 5.1E-13 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 PRINTS PR01009 Flagellar M-ring protein signature 349 373 5.1E-13 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 PRINTS PR01009 Flagellar M-ring protein signature 153 167 5.1E-13 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 Gene3D G3DSA:3.30.300.30 123 219 1.3E-8 T 11-10-2018 Clos_1479 d5b1aa89633288e5258ec194458c68b6 515 Pfam PF08345 Flagellar M-ring protein C-terminal 256 406 2.4E-25 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal Clos_2485 94c34935774b9a4aebca560bab552a2f 890 Gene3D G3DSA:1.10.3060.10 630 838 1.4E-71 T 11-10-2018 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 Pfam PF07516 SecA Wing and Scaffold domain 626 835 3.4E-69 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 SUPERFAMILY SSF81767 226 349 6.67E-47 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 Gene3D G3DSA:3.90.1440.10 228 349 3.8E-185 T 11-10-2018 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 Gene3D G3DSA:3.40.50.300 21 396 3.8E-185 T 11-10-2018 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 SUPERFAMILY SSF52540 398 627 1.62E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2485 94c34935774b9a4aebca560bab552a2f 890 SUPERFAMILY SSF52540 4 396 2.97E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2485 94c34935774b9a4aebca560bab552a2f 890 Pfam PF02810 SEC-C motif 872 890 8.8E-10 T 11-10-2018 IPR004027 SEC-C motif Clos_2485 94c34935774b9a4aebca560bab552a2f 890 Pfam PF07517 SecA DEAD-like domain 6 382 9.3E-135 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 Gene3D G3DSA:3.40.50.300 398 628 4.5E-92 T 11-10-2018 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 824 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 SMART SM00957 5 383 9.1E-293 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 ProSitePatterns PS01312 SecA family signature. 481 496 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 Pfam PF01043 SecA preprotein cross-linking domain 231 339 1.3E-42 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 SMART SM00958 227 339 9.3E-70 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 838 20.216 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 PRINTS PR00906 SecA protein signature 320 342 1.3E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 PRINTS PR00906 SecA protein signature 100 114 1.3E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 PRINTS PR00906 SecA protein signature 116 126 1.3E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 PRINTS PR00906 SecA protein signature 394 407 1.3E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 PRINTS PR00906 SecA protein signature 357 374 1.3E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 PRINTS PR00906 SecA protein signature 169 189 1.3E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 PRINTS PR00906 SecA protein signature 62 86 1.3E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Clos_2485 94c34935774b9a4aebca560bab552a2f 890 SUPERFAMILY SSF81886 629 880 9.81E-73 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Clos_0695 bd1b45b2d9066218899ea471eeae63b6 566 Pfam PF13786 Domain of unknown function (DUF4179) 82 168 3.0E-11 T 11-10-2018 IPR025436 Domain of unknown function DUF4179 Clos_0695 bd1b45b2d9066218899ea471eeae63b6 566 Pfam PF13490 Putative zinc-finger 3 37 1.2E-6 T 11-10-2018 IPR027383 Putative zinc-finger Clos_2851 a999017eb9442c1245e21f63e905b231 293 Gene3D G3DSA:3.40.50.150 13 189 1.3E-75 T 11-10-2018 Clos_2851 a999017eb9442c1245e21f63e905b231 293 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 38 65 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Clos_2851 a999017eb9442c1245e21f63e905b231 293 SMART SM00650 22 189 6.4E-49 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Clos_2851 a999017eb9442c1245e21f63e905b231 293 SUPERFAMILY SSF53335 14 259 1.3E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2851 a999017eb9442c1245e21f63e905b231 293 Pfam PF00398 Ribosomal RNA adenine dimethylase 6 259 1.5E-49 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Clos_2851 a999017eb9442c1245e21f63e905b231 293 Gene3D G3DSA:1.10.8.100 140 256 1.3E-75 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Clos_0911 2d06468bd746e9dd75398298e9ab7504 677 SUPERFAMILY SSF53067 216 383 1.71E-27 T 11-10-2018 Clos_0911 2d06468bd746e9dd75398298e9ab7504 677 Pfam PF14450 Cell division protein FtsA 219 380 2.0E-11 T 11-10-2018 Clos_0911 2d06468bd746e9dd75398298e9ab7504 677 Gene3D G3DSA:3.30.420.40 15 208 6.9E-41 T 11-10-2018 Clos_0911 2d06468bd746e9dd75398298e9ab7504 677 Gene3D G3DSA:3.90.640.10 247 303 6.9E-41 T 11-10-2018 Clos_0911 2d06468bd746e9dd75398298e9ab7504 677 SMART SM00842 12 208 1.4E-51 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Clos_0911 2d06468bd746e9dd75398298e9ab7504 677 Gene3D G3DSA:3.30.1490.110 88 181 6.9E-41 T 11-10-2018 Clos_0911 2d06468bd746e9dd75398298e9ab7504 677 Gene3D G3DSA:3.30.420.40 209 353 6.9E-41 T 11-10-2018 Clos_0911 2d06468bd746e9dd75398298e9ab7504 677 SUPERFAMILY SSF53067 11 206 4.75E-25 T 11-10-2018 Clos_2189 2cf7e2f83a0234dc57c0b6411381ea4d 236 Pfam PF01863 Protein of unknown function DUF45 20 209 2.3E-52 T 11-10-2018 IPR002725 Protein of unknown function DUF45 Clos_2189 2cf7e2f83a0234dc57c0b6411381ea4d 236 Gene3D G3DSA:3.30.2010.10 118 213 1.1E-18 T 11-10-2018 Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 190 2.2E-7 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 SUPERFAMILY SSF52518 6 219 1.47E-46 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 Pfam PF00037 4Fe-4S binding domain 571 592 2.9E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 SUPERFAMILY SSF52518 340 540 1.77E-22 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 576 587 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 371 520 7.1E-19 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 Gene3D G3DSA:3.30.70.20 522 601 6.7E-10 T 11-10-2018 Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 Gene3D G3DSA:3.40.50.970 1 183 3.1E-44 T 11-10-2018 Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 Gene3D G3DSA:3.40.50.970 355 521 9.1E-15 T 11-10-2018 Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 SUPERFAMILY SSF54862 520 592 1.45E-13 T 11-10-2018 Clos_1040 b0e21c824dc1f439a670cb20c564b1c3 605 PIRSF PIRSF006439 1 598 4.6E-225 T 11-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 SUPERFAMILY SSF46689 84 134 1.08E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 Gene3D G3DSA:1.10.1670.10 441 485 2.3E-18 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 SUPERFAMILY SSF55945 196 296 1.88E-25 T 11-10-2018 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 Gene3D G3DSA:3.30.310.20 197 317 9.9E-34 T 11-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 SMART SM00342 100 183 1.9E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 Gene3D G3DSA:1.10.340.30 318 439 8.8E-35 T 11-10-2018 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 SMART SM01009 196 317 1.9E-32 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 Pfam PF02805 Metal binding domain of Ada 9 71 6.0E-28 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 Pfam PF12833 Helix-turn-helix domain 106 184 1.8E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 Pfam PF06029 AlkA N-terminal domain 196 317 1.7E-33 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 137 179 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 SMART SM00478 327 484 7.3E-15 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 Gene3D G3DSA:3.40.10.10 4 73 3.1E-27 T 11-10-2018 IPR035451 Ada-like domain superfamily Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 Gene3D G3DSA:1.10.10.60 81 196 2.5E-24 T 11-10-2018 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 323 451 2.3E-8 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 SUPERFAMILY SSF46689 137 186 2.37E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 SUPERFAMILY SSF48150 309 482 9.58E-42 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Clos_0146 4106936ab2cb43f1d83347ca82fbe5bc 485 SUPERFAMILY SSF57884 4 84 6.41E-31 T 11-10-2018 IPR035451 Ada-like domain superfamily Clos_1461 5428f867488ce605eac011637305ba15 431 SUPERFAMILY SSF52540 226 429 2.7E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1461 5428f867488ce605eac011637305ba15 431 Gene3D G3DSA:1.20.120.140 130 427 2.9E-117 T 11-10-2018 Clos_1461 5428f867488ce605eac011637305ba15 431 SUPERFAMILY SSF47364 128 208 1.57E-22 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Clos_1461 5428f867488ce605eac011637305ba15 431 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 402 415 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1461 5428f867488ce605eac011637305ba15 431 Pfam PF02881 SRP54-type protein, helical bundle domain 145 209 2.1E-13 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1461 5428f867488ce605eac011637305ba15 431 Pfam PF00448 SRP54-type protein, GTPase domain 229 428 1.8E-80 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1461 5428f867488ce605eac011637305ba15 431 Gene3D G3DSA:3.40.50.300 228 417 2.9E-117 T 11-10-2018 Clos_1461 5428f867488ce605eac011637305ba15 431 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 157 428 9.4E-114 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Clos_1461 5428f867488ce605eac011637305ba15 431 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 157 429 62.846 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Clos_1461 5428f867488ce605eac011637305ba15 431 SMART SM00963 133 214 2.6E-23 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1461 5428f867488ce605eac011637305ba15 431 SMART SM00382 227 407 4.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1461 5428f867488ce605eac011637305ba15 431 SMART SM00962 228 429 1.0E-120 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1770 11586129bd0561c104cec1a1c9de2215 274 Gene3D G3DSA:3.20.20.20 36 124 4.7E-13 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_1770 11586129bd0561c104cec1a1c9de2215 274 Gene3D G3DSA:3.30.70.20 136 197 2.0E-14 T 11-10-2018 Clos_1770 11586129bd0561c104cec1a1c9de2215 274 Gene3D G3DSA:3.30.70.20 200 271 1.2E-12 T 11-10-2018 Clos_1770 11586129bd0561c104cec1a1c9de2215 274 Pfam PF12838 4Fe-4S dicluster domain 218 261 7.7E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1770 11586129bd0561c104cec1a1c9de2215 274 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 173 184 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_1770 11586129bd0561c104cec1a1c9de2215 274 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 6 195 27.491 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Clos_1770 11586129bd0561c104cec1a1c9de2215 274 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 247 258 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_1770 11586129bd0561c104cec1a1c9de2215 274 SUPERFAMILY SSF54862 137 265 8.79E-22 T 11-10-2018 Clos_1770 11586129bd0561c104cec1a1c9de2215 274 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 161 2.5E-21 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Clos_1770 11586129bd0561c104cec1a1c9de2215 274 Pfam PF04060 Putative Fe-S cluster 46 78 4.4E-13 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 Clos_1770 11586129bd0561c104cec1a1c9de2215 274 Pfam PF00037 4Fe-4S binding domain 167 188 5.1E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2502 36de7099426e8da86064e8b0aa809de9 395 Gene3D G3DSA:3.40.50.2300 159 291 5.1E-104 T 11-10-2018 Clos_2502 36de7099426e8da86064e8b0aa809de9 395 Gene3D G3DSA:3.40.50.2300 67 373 5.1E-104 T 11-10-2018 Clos_2502 36de7099426e8da86064e8b0aa809de9 395 Pfam PF13458 Periplasmic binding protein 45 377 1.6E-56 T 11-10-2018 IPR028081 Leucine-binding protein domain Clos_2502 36de7099426e8da86064e8b0aa809de9 395 SUPERFAMILY SSF53822 43 388 4.48E-84 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Clos_1224 b740548162a2943016218ad90f30f5b5 344 SUPERFAMILY SSF48019 224 343 1.22E-19 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Clos_1224 b740548162a2943016218ad90f30f5b5 344 Gene3D G3DSA:3.40.50.300 3 142 1.2E-41 T 11-10-2018 Clos_1224 b740548162a2943016218ad90f30f5b5 344 Gene3D G3DSA:1.20.272.10 221 344 4.3E-33 T 11-10-2018 Clos_1224 b740548162a2943016218ad90f30f5b5 344 Pfam PF06144 DNA polymerase III, delta subunit 19 197 2.4E-34 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Clos_1224 b740548162a2943016218ad90f30f5b5 344 SUPERFAMILY SSF52540 6 218 1.12E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1224 b740548162a2943016218ad90f30f5b5 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 342 4.6E-57 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Clos_1105 1793f0291a3736d81f6ba5380199eb9f 238 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 199 8.6E-33 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Clos_1105 1793f0291a3736d81f6ba5380199eb9f 238 PIRSF PIRSF000883 1 236 2.0E-65 T 11-10-2018 IPR011152 Phosphoesterase MJ0912 Clos_1105 1793f0291a3736d81f6ba5380199eb9f 238 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 200 1.8E-19 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Clos_1105 1793f0291a3736d81f6ba5380199eb9f 238 SUPERFAMILY SSF56300 2 236 8.55E-57 T 11-10-2018 Clos_1105 1793f0291a3736d81f6ba5380199eb9f 238 Gene3D G3DSA:3.60.21.10 1 238 3.8E-68 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_2142 632fc5ea6e7cf96c453fcc8f534d69f5 356 Pfam PF13478 XdhC Rossmann domain 92 234 5.0E-41 T 11-10-2018 IPR027051 XdhC Rossmann domain Clos_2142 632fc5ea6e7cf96c453fcc8f534d69f5 356 Gene3D G3DSA:3.40.50.720 91 254 9.1E-53 T 11-10-2018 Clos_2142 632fc5ea6e7cf96c453fcc8f534d69f5 356 Pfam PF02625 XdhC and CoxI family 266 331 2.5E-17 T 11-10-2018 IPR003777 XdhC- CoxI Clos_0289 18e393dacdc09005fe06e040acfa5d72 369 Gene3D G3DSA:1.20.1740.10 8 367 4.9E-10 T 11-10-2018 Clos_0289 18e393dacdc09005fe06e040acfa5d72 369 Pfam PF03845 Spore germination protein 8 326 1.8E-62 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Clos_0289 18e393dacdc09005fe06e040acfa5d72 369 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 11 362 1.3E-69 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Clos_0461 ca165921b9d0bc7cb159564a4e1e3edb 368 Pfam PF01938 TRAM domain 298 347 1.4E-4 T 11-10-2018 IPR002792 TRAM domain Clos_0461 ca165921b9d0bc7cb159564a4e1e3edb 368 Gene3D G3DSA:3.40.50.1010 163 298 4.5E-53 T 11-10-2018 Clos_0461 ca165921b9d0bc7cb159564a4e1e3edb 368 SMART SM00670 167 274 3.9E-9 T 11-10-2018 IPR002716 PIN domain Clos_0461 ca165921b9d0bc7cb159564a4e1e3edb 368 SUPERFAMILY SSF88723 169 295 3.92E-23 T 11-10-2018 IPR029060 PIN-like domain superfamily Clos_0069 1462df9d4833b3c14b44095d2641f772 700 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 363 376 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0069 1462df9d4833b3c14b44095d2641f772 700 Gene3D G3DSA:1.10.8.60 512 582 4.3E-14 T 11-10-2018 Clos_0069 1462df9d4833b3c14b44095d2641f772 700 Gene3D G3DSA:3.40.50.300 327 511 1.0E-68 T 11-10-2018 Clos_0069 1462df9d4833b3c14b44095d2641f772 700 Pfam PF00989 PAS fold 217 277 2.7E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_0069 1462df9d4833b3c14b44095d2641f772 700 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 426 441 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_0069 1462df9d4833b3c14b44095d2641f772 700 Gene3D G3DSA:1.10.10.10 614 697 6.3E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0069 1462df9d4833b3c14b44095d2641f772 700 SUPERFAMILY SSF55785 210 309 1.39E-9 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0069 1462df9d4833b3c14b44095d2641f772 700 SMART SM00382 359 504 1.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0069 1462df9d4833b3c14b44095d2641f772 700 SUPERFAMILY SSF52540 338 570 6.02E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0069 1462df9d4833b3c14b44095d2641f772 700 SMART SM00091 212 278 2.6E-6 T 11-10-2018 IPR000014 PAS domain Clos_0069 1462df9d4833b3c14b44095d2641f772 700 Pfam PF00158 Sigma-54 interaction domain 339 506 1.2E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0069 1462df9d4833b3c14b44095d2641f772 700 Gene3D G3DSA:3.30.450.20 214 314 8.0E-13 T 11-10-2018 Clos_1611 7a5df1e9cc47afbc8c72f6ac99b09ae6 408 Pfam PF02601 Exonuclease VII, large subunit 124 339 4.6E-75 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Clos_1611 7a5df1e9cc47afbc8c72f6ac99b09ae6 408 Pfam PF02601 Exonuclease VII, large subunit 335 393 7.1E-9 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Clos_1611 7a5df1e9cc47afbc8c72f6ac99b09ae6 408 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 7 395 1.6E-147 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Clos_1611 7a5df1e9cc47afbc8c72f6ac99b09ae6 408 Pfam PF13742 OB-fold nucleic acid binding domain 6 101 4.5E-30 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Clos_1611 7a5df1e9cc47afbc8c72f6ac99b09ae6 408 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 3 396 27.53 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Clos_1174 c4188846231070ac247591762cf05667 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 173 8.6E-41 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1174 c4188846231070ac247591762cf05667 408 Pfam PF00994 Probable molybdopterin binding domain 187 320 8.7E-22 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1174 c4188846231070ac247591762cf05667 408 Gene3D G3DSA:3.90.105.10 28 180 3.0E-92 T 11-10-2018 Clos_1174 c4188846231070ac247591762cf05667 408 SUPERFAMILY SSF63867 335 408 2.62E-13 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1174 c4188846231070ac247591762cf05667 408 Gene3D G3DSA:3.40.980.10 181 323 3.0E-92 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1174 c4188846231070ac247591762cf05667 408 SUPERFAMILY SSF53218 184 324 1.57E-32 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1174 c4188846231070ac247591762cf05667 408 Gene3D G3DSA:2.40.340.10 337 408 3.1E-16 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1174 c4188846231070ac247591762cf05667 408 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 182 319 4.6E-29 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1174 c4188846231070ac247591762cf05667 408 Gene3D G3DSA:2.170.190.11 51 147 3.0E-92 T 11-10-2018 Clos_1174 c4188846231070ac247591762cf05667 408 SUPERFAMILY SSF63882 6 180 6.8E-51 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1174 c4188846231070ac247591762cf05667 408 Pfam PF03454 MoeA C-terminal region (domain IV) 340 407 1.5E-13 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1174 c4188846231070ac247591762cf05667 408 SMART SM00852 186 325 2.5E-28 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1438 114e60d6a4892ee0c2a9af39cc24f246 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 17.48 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1438 114e60d6a4892ee0c2a9af39cc24f246 63 Pfam PF00830 Ribosomal L28 family 3 58 4.7E-22 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1438 114e60d6a4892ee0c2a9af39cc24f246 63 SUPERFAMILY SSF143800 2 62 2.55E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1438 114e60d6a4892ee0c2a9af39cc24f246 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 2 56 1.3E-21 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1438 114e60d6a4892ee0c2a9af39cc24f246 63 Gene3D G3DSA:2.30.170.40 19 63 3.0E-20 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 SMART SM00437 261 540 2.7E-70 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 1.4E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.4E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 503 517 1.4E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 185 203 1.4E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 304 313 1.4E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 Gene3D G3DSA:2.70.20.10 209 471 5.3E-157 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 Gene3D G3DSA:3.40.50.140 2 153 1.1E-55 T 11-10-2018 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 Gene3D G3DSA:1.10.460.10 159 584 5.3E-157 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 Gene3D G3DSA:1.10.290.10 270 401 5.3E-157 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 SMART SM00493 2 125 5.2E-21 T 11-10-2018 IPR006171 TOPRIM domain Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 SUPERFAMILY SSF56712 2 589 5.76E-176 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 697 8.4E-199 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 SMART SM00436 125 215 2.3E-33 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 Pfam PF01751 Toprim domain 4 133 3.5E-14 T 11-10-2018 IPR006171 TOPRIM domain Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 298 313 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Clos_2155 41d97f264b8f2007f7859939f2490e0d 716 Pfam PF01131 DNA topoisomerase 152 574 4.5E-123 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 Gene3D G3DSA:3.40.50.300 1 213 2.6E-84 T 11-10-2018 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 SUPERFAMILY SSF52540 1 209 5.13E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 Pfam PF05191 Adenylate kinase, active site lid 127 162 2.3E-14 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 Hamap MF_00235 Adenylate kinase [adk]. 1 213 51.638 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 Pfam PF00406 Adenylate kinase 5 190 1.1E-59 T 11-10-2018 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 PRINTS PR00094 Adenylate kinase signature 81 97 6.9E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 PRINTS PR00094 Adenylate kinase signature 177 191 6.9E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 PRINTS PR00094 Adenylate kinase signature 160 175 6.9E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 PRINTS PR00094 Adenylate kinase signature 32 46 6.9E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 PRINTS PR00094 Adenylate kinase signature 4 17 6.9E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Clos_0513 c70fe323e6909ca8d3684e66d1166d80 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 211 4.7E-83 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Clos_2668 e6064432e8d848829d971053ab82ec4a 281 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 6 279 1.9E-86 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Clos_2668 e6064432e8d848829d971053ab82ec4a 281 Gene3D G3DSA:3.40.1010.10 1 112 5.1E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Clos_2668 e6064432e8d848829d971053ab82ec4a 281 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 83 94 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Clos_2668 e6064432e8d848829d971053ab82ec4a 281 Gene3D G3DSA:3.30.950.10 113 228 9.6E-41 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Clos_2668 e6064432e8d848829d971053ab82ec4a 281 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 5 223 36.855 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Clos_2668 e6064432e8d848829d971053ab82ec4a 281 PIRSF PIRSF005917 1 281 5.2E-103 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Clos_2668 e6064432e8d848829d971053ab82ec4a 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 1.1E-25 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Clos_2668 e6064432e8d848829d971053ab82ec4a 281 SUPERFAMILY SSF53790 3 221 6.94E-83 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 SUPERFAMILY SSF52096 10 192 4.59E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 11-10-2018 IPR018215 ClpP, Ser active site Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 Pfam PF00574 Clp protease 13 192 9.3E-90 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 1.2E-105 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-10-2018 IPR033135 ClpP, histidine active site Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.8E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.8E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 3.8E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.8E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.8E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 Gene3D G3DSA:3.90.226.10 1 194 6.4E-85 T 11-10-2018 Clos_2174 f4f5dd8a039bce263cafc3a50d8117a3 195 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.537 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_0209 46ec2f9ca25b71fbe5055429f757c92d 363 Gene3D G3DSA:3.30.70.20 251 309 9.0E-11 T 11-10-2018 Clos_0209 46ec2f9ca25b71fbe5055429f757c92d 363 Gene3D G3DSA:3.30.70.20 18 96 1.0E-11 T 11-10-2018 Clos_0209 46ec2f9ca25b71fbe5055429f757c92d 363 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 291 302 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0209 46ec2f9ca25b71fbe5055429f757c92d 363 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 258 269 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0209 46ec2f9ca25b71fbe5055429f757c92d 363 SUPERFAMILY SSF54862 15 80 1.4E-14 T 11-10-2018 Clos_0209 46ec2f9ca25b71fbe5055429f757c92d 363 Pfam PF00037 4Fe-4S binding domain 53 75 1.3E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0209 46ec2f9ca25b71fbe5055429f757c92d 363 SUPERFAMILY SSF54862 247 307 1.19E-13 T 11-10-2018 Clos_0209 46ec2f9ca25b71fbe5055429f757c92d 363 Pfam PF12838 4Fe-4S dicluster domain 258 305 3.5E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0209 46ec2f9ca25b71fbe5055429f757c92d 363 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 Pfam PF04542 Sigma-70 region 2 58 115 2.3E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 42 265 4.0E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 Pfam PF04539 Sigma-70 region 3 125 188 8.5E-10 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 41 265 3.0E-79 T 11-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 SUPERFAMILY SSF88659 119 195 3.79E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 Pfam PF04545 Sigma-70, region 4 214 262 2.4E-11 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 Gene3D G3DSA:1.20.120.1810 2 114 3.6E-17 T 11-10-2018 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 PRINTS PR00046 Major sigma-70 factor signature 70 83 2.5E-5 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 PRINTS PR00046 Major sigma-70 factor signature 235 250 2.5E-5 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 PRINTS PR00046 Major sigma-70 factor signature 218 230 2.5E-5 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 PRINTS PR00046 Major sigma-70 factor signature 250 261 2.5E-5 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 SUPERFAMILY SSF88659 184 266 3.55E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 Gene3D G3DSA:1.20.140.160 118 268 8.3E-28 T 11-10-2018 Clos_0010 b3fb703b525b067c4d6a49d70ab42350 270 SUPERFAMILY SSF88946 22 115 7.38E-27 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Pfam PF06580 Histidine kinase 833 912 2.4E-20 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Gene3D G3DSA:3.30.565.10 507 666 6.1E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Gene3D G3DSA:1.10.287.130 428 506 6.7E-20 T 11-10-2018 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 SUPERFAMILY SSF55874 495 661 5.76E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Gene3D G3DSA:2.60.120.260 55 202 7.5E-8 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 603 6.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 617 6.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 660 6.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 641 6.3E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Gene3D G3DSA:3.40.50.12740 703 844 1.1E-33 T 11-10-2018 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Gene3D G3DSA:3.30.565.10 888 1029 8.0E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 SUPERFAMILY SSF49785 57 200 9.35E-9 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 SMART SM00448 703 816 4.4E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 SUPERFAMILY SSF55874 888 1025 4.45E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 SUPERFAMILY SSF52172 699 822 1.12E-32 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 SUPERFAMILY SSF47384 425 507 1.79E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Pfam PF00072 Response regulator receiver domain 705 817 2.5E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 SMART SM00387 553 663 2.4E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 SMART SM00387 926 1028 1.4E-4 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Pfam PF00512 His Kinase A (phospho-acceptor) domain 439 505 2.8E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 SMART SM00388 438 506 2.3E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 931 1026 5.7E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 554 661 2.2E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2791 6a97c8a6c234cc983e85fe43881965d1 1035 Pfam PF07695 7TM diverse intracellular signalling 215 411 4.3E-7 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 SUPERFAMILY SSF75620 8 352 8.63E-139 T 11-10-2018 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 356 41.348 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 Pfam PF03462 PCRF domain 8 203 4.5E-77 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 Gene3D G3DSA:3.30.70.1660 111 341 1.1E-97 T 11-10-2018 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 SMART SM00937 63 178 2.2E-67 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 227 243 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 Gene3D G3DSA:1.20.58.410 2 102 1.8E-7 T 11-10-2018 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 Pfam PF00472 RF-1 domain 211 320 1.3E-39 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 Gene3D G3DSA:3.30.160.20 210 296 1.1E-97 T 11-10-2018 Clos_2580 139c50003bf9e5225ac881f1e48e6466 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 1.7E-166 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 SUPERFAMILY SSF47384 235 316 1.26E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 Gene3D G3DSA:1.10.287.130 257 316 2.3E-11 T 11-10-2018 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 SUPERFAMILY SSF55874 305 470 1.57E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2165 9edd50b706463588ff9691b402ac0d97 474 SMART SM00304 197 250 3.2E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 471 2.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2165 9edd50b706463588ff9691b402ac0d97 474 Gene3D G3DSA:3.30.565.10 323 474 1.6E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2165 9edd50b706463588ff9691b402ac0d97 474 SMART SM00387 360 472 5.7E-40 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2165 9edd50b706463588ff9691b402ac0d97 474 SMART SM00388 251 315 2.9E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 314 2.0E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 Gene3D G3DSA:1.20.1480.50 162 256 4.0E-8 T 11-10-2018 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 1.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 1.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 1.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2165 9edd50b706463588ff9691b402ac0d97 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 1.1E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1017 ae4e7c354572e5fa1460e4eec6912b75 197 Gene3D G3DSA:3.40.1010.10 1 96 2.0E-13 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Clos_1017 ae4e7c354572e5fa1460e4eec6912b75 197 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 179 4.6E-23 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Clos_1017 ae4e7c354572e5fa1460e4eec6912b75 197 SUPERFAMILY SSF53790 1 194 1.31E-30 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Clos_1017 ae4e7c354572e5fa1460e4eec6912b75 197 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 3 190 1.2E-44 T 11-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 Clos_2681 970ac455e6f5ddb5970c9e19e790271a 401 Pfam PF02272 DHHA1 domain 261 389 1.3E-10 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Clos_2681 970ac455e6f5ddb5970c9e19e790271a 401 Gene3D G3DSA:3.30.980.10 85 240 1.4E-42 T 11-10-2018 Clos_2681 970ac455e6f5ddb5970c9e19e790271a 401 Gene3D G3DSA:2.40.30.130 1 84 1.3E-28 T 11-10-2018 Clos_2681 970ac455e6f5ddb5970c9e19e790271a 401 Pfam PF01411 tRNA synthetases class II (A) 17 87 4.1E-8 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Clos_2681 970ac455e6f5ddb5970c9e19e790271a 401 SMART SM00863 181 223 8.9E-12 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Clos_2681 970ac455e6f5ddb5970c9e19e790271a 401 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 181 220 1.9E-7 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Clos_2681 970ac455e6f5ddb5970c9e19e790271a 401 Gene3D G3DSA:3.10.310.40 290 397 1.5E-14 T 11-10-2018 Clos_2681 970ac455e6f5ddb5970c9e19e790271a 401 SUPERFAMILY SSF50447 2 77 5.3E-16 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_2681 970ac455e6f5ddb5970c9e19e790271a 401 SUPERFAMILY SSF55186 89 230 3.66E-30 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Clos_1188 df6add7badda64d5bc3924f64770c8cf 422 TIGRFAM TIGR01224 hutI: imidazolonepropionase 35 414 9.7E-147 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_1188 df6add7badda64d5bc3924f64770c8cf 422 Gene3D G3DSA:3.20.20.140 77 375 2.2E-175 T 11-10-2018 Clos_1188 df6add7badda64d5bc3924f64770c8cf 422 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 415 42.389 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_1188 df6add7badda64d5bc3924f64770c8cf 422 Pfam PF01979 Amidohydrolase family 73 415 1.4E-23 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Clos_1188 df6add7badda64d5bc3924f64770c8cf 422 SUPERFAMILY SSF51338 32 418 3.94E-21 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_1188 df6add7badda64d5bc3924f64770c8cf 422 SUPERFAMILY SSF51556 76 376 9.46E-83 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_1188 df6add7badda64d5bc3924f64770c8cf 422 Gene3D G3DSA:2.30.40.10 8 413 2.2E-175 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_1582 063f0b12774dec515b1f178ab5fe3f63 148 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 125 1.4E-29 T 11-10-2018 IPR014229 Sporulation protein YtfJ Clos_1582 063f0b12774dec515b1f178ab5fe3f63 148 PIRSF PIRSF021377 1 145 4.1E-51 T 11-10-2018 IPR014229 Sporulation protein YtfJ Clos_1582 063f0b12774dec515b1f178ab5fe3f63 148 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 134 3.4E-55 T 11-10-2018 IPR014229 Sporulation protein YtfJ Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 Pfam PF00384 Molybdopterin oxidoreductase 59 458 1.2E-46 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 Gene3D G3DSA:3.40.50.740 66 463 8.9E-123 T 11-10-2018 Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 Gene3D G3DSA:3.30.2070.10 417 506 8.9E-123 T 11-10-2018 Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 Gene3D G3DSA:2.20.25.90 1 61 1.7E-12 T 11-10-2018 Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 SUPERFAMILY SSF50692 536 650 1.08E-18 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 Pfam PF01568 Molydopterin dinucleotide binding domain 542 644 1.1E-10 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 SUPERFAMILY SSF53706 2 548 9.82E-134 T 11-10-2018 Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 SMART SM00926 1 56 8.7E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 54 2.3E-14 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 Gene3D G3DSA:2.40.40.20 524 650 1.1E-16 T 11-10-2018 Clos_0245 95e6cf32d907bb78f5ed9a5601c0c8d1 650 Gene3D G3DSA:3.40.228.10 132 523 8.9E-123 T 11-10-2018 Clos_1097 f80340bfd2a9016c7962fc837697dfc8 226 Gene3D G3DSA:3.30.70.20 4 63 5.8E-37 T 11-10-2018 Clos_1097 f80340bfd2a9016c7962fc837697dfc8 226 Gene3D G3DSA:3.30.70.20 158 219 2.7E-21 T 11-10-2018 Clos_1097 f80340bfd2a9016c7962fc837697dfc8 226 SUPERFAMILY SSF54862 2 219 5.23E-67 T 11-10-2018 Clos_1097 f80340bfd2a9016c7962fc837697dfc8 226 Pfam PF13247 4Fe-4S dicluster domain 50 112 4.9E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1097 f80340bfd2a9016c7962fc837697dfc8 226 Pfam PF13247 4Fe-4S dicluster domain 151 186 1.5E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1097 f80340bfd2a9016c7962fc837697dfc8 226 Gene3D G3DSA:3.30.70.20 64 114 5.8E-37 T 11-10-2018 Clos_1097 f80340bfd2a9016c7962fc837697dfc8 226 Pfam PF12800 4Fe-4S binding domain 11 24 0.65 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1097 f80340bfd2a9016c7962fc837697dfc8 226 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 1.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 1.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 Pfam PF14526 Integron-associated effector binding protein 132 294 8.6E-26 T 11-10-2018 IPR029441 Integron-associated effector binding protein Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 Pfam PF12833 Helix-turn-helix domain 27 103 1.1E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 SMART SM00871 129 295 2.0E-29 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 99 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 SUPERFAMILY SSF46689 5 55 7.29E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 SUPERFAMILY SSF55136 129 296 1.4E-23 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 Gene3D G3DSA:1.10.10.60 2 54 6.1E-15 T 11-10-2018 Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 SMART SM00342 21 103 5.1E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 Gene3D G3DSA:1.10.10.60 55 105 1.1E-10 T 11-10-2018 Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 SUPERFAMILY SSF46689 58 103 1.12E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2321 d2bf69e7345e21e91e349f77e3835c7f 302 Gene3D G3DSA:3.20.80.10 129 301 2.3E-41 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_1593 2f0913ab6bfae5616b44b78f8efd1072 294 Pfam PF00589 Phage integrase family 111 279 7.1E-44 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Clos_1593 2f0913ab6bfae5616b44b78f8efd1072 294 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 85 3.3E-12 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Clos_1593 2f0913ab6bfae5616b44b78f8efd1072 294 SUPERFAMILY SSF56349 13 288 7.95E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Clos_1593 2f0913ab6bfae5616b44b78f8efd1072 294 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 294 49.184 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Clos_1593 2f0913ab6bfae5616b44b78f8efd1072 294 Gene3D G3DSA:1.10.150.130 1 92 1.4E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Clos_1593 2f0913ab6bfae5616b44b78f8efd1072 294 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 294 4.9E-104 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Clos_1593 2f0913ab6bfae5616b44b78f8efd1072 294 Gene3D G3DSA:1.10.443.10 109 288 9.9E-56 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Clos_0420 50bf9954691df05fcc0a05d12cc8e45a 510 SUPERFAMILY SSF52540 263 436 4.43E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0420 50bf9954691df05fcc0a05d12cc8e45a 510 SMART SM00534 303 506 7.9E-30 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_0420 50bf9954691df05fcc0a05d12cc8e45a 510 Gene3D G3DSA:3.40.50.300 263 510 7.1E-57 T 11-10-2018 Clos_0420 50bf9954691df05fcc0a05d12cc8e45a 510 SUPERFAMILY SSF48334 48 259 3.27E-13 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clos_0420 50bf9954691df05fcc0a05d12cc8e45a 510 SMART SM00533 11 286 0.005 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Clos_0420 50bf9954691df05fcc0a05d12cc8e45a 510 Pfam PF00488 MutS domain V 307 506 5.8E-33 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 1.3E-60 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 Gene3D G3DSA:3.90.226.10 1 316 6.1E-111 T 11-10-2018 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 3.4E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 3.4E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 3.4E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 3.4E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 3.4E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 3.4E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 47.701 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 SUPERFAMILY SSF52096 2 315 7.01E-96 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_0397 9d021e7c458517c15ada11d7d10b4340 316 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 3.1E-141 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0851 37dcc3ab4642e4c8117c6c243fb19b2a 438 Gene3D G3DSA:3.40.640.10 71 305 5.9E-50 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0851 37dcc3ab4642e4c8117c6c243fb19b2a 438 Gene3D G3DSA:3.90.1150.10 35 421 5.9E-50 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_0851 37dcc3ab4642e4c8117c6c243fb19b2a 438 SUPERFAMILY SSF53383 6 433 3.81E-54 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_0851 37dcc3ab4642e4c8117c6c243fb19b2a 438 Pfam PF00155 Aminotransferase class I and II 35 357 1.3E-24 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 1.0E-124 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 SUPERFAMILY SSF53784 1 316 7.72E-111 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 Gene3D G3DSA:3.40.50.450 3 286 1.3E-108 T 11-10-2018 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 Gene3D G3DSA:3.40.50.460 142 251 1.3E-108 T 11-10-2018 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PIRSF PIRSF000532 1 318 7.9E-115 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 45.149 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 6.3E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 6.3E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 6.3E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 6.3E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 6.3E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 6.3E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 6.3E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 6.3E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 6.3E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0585 6e5f06011a71d7af734e52191fe0dcb6 319 Pfam PF00365 Phosphofructokinase 3 275 2.5E-105 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Clos_0418 3e7f073c881a1c77a8b8ade229fd39e8 416 Pfam PF12544 Lysine-2,3-aminomutase 313 414 1.3E-41 T 11-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain Clos_0418 3e7f073c881a1c77a8b8ade229fd39e8 416 SUPERFAMILY SSF102114 106 348 6.15E-36 T 11-10-2018 Clos_0418 3e7f073c881a1c77a8b8ade229fd39e8 416 PIRSF PIRSF004911 1 402 8.0E-174 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Clos_0418 3e7f073c881a1c77a8b8ade229fd39e8 416 Gene3D G3DSA:3.20.20.70 55 340 2.2E-125 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0418 3e7f073c881a1c77a8b8ade229fd39e8 416 Gene3D G3DSA:2.40.50.600 341 402 4.2E-28 T 11-10-2018 Clos_0418 3e7f073c881a1c77a8b8ade229fd39e8 416 Pfam PF04055 Radical SAM superfamily 122 269 1.3E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_0418 3e7f073c881a1c77a8b8ade229fd39e8 416 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 13 413 1.2E-193 T 11-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 Clos_0418 3e7f073c881a1c77a8b8ade229fd39e8 416 TIGRFAM TIGR00238 TIGR00238: KamA family protein 6 334 4.8E-125 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 Gene3D G3DSA:3.30.1140.32 109 209 2.0E-41 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 Pfam PF07650 KH domain 38 111 1.8E-17 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 SUPERFAMILY SSF54814 2 107 1.05E-35 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 SMART SM00322 61 126 2.8E-8 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 203 7.7E-39 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 4.8E-92 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 207 38.39 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 ProSitePatterns PS00548 Ribosomal protein S3 signature. 164 198 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 Gene3D G3DSA:3.30.300.20 17 108 4.2E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Clos_0498 f5593ea8ce42cb5e03b585c30519131d 238 SUPERFAMILY SSF54821 108 207 1.2E-38 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 Gene3D G3DSA:1.10.8.60 452 533 1.2E-24 T 11-10-2018 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 Gene3D G3DSA:3.30.450.20 156 259 9.6E-9 T 11-10-2018 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 SUPERFAMILY SSF55785 154 213 2.12E-6 T 11-10-2018 IPR035965 PAS domain superfamily Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 Gene3D G3DSA:3.30.450.40 2 150 3.6E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 Gene3D G3DSA:1.10.10.60 542 588 2.9E-14 T 11-10-2018 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 SUPERFAMILY SSF55781 11 110 2.49E-5 T 11-10-2018 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 SUPERFAMILY SSF52540 278 523 2.19E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 366 381 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 SMART SM00382 299 447 2.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 303 316 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 Gene3D G3DSA:3.40.50.300 266 451 5.0E-65 T 11-10-2018 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 Pfam PF02954 Bacterial regulatory protein, Fis family 543 586 1.2E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 Pfam PF00158 Sigma-54 interaction domain 279 447 1.8E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 SMART SM00091 154 220 0.0027 T 11-10-2018 IPR000014 PAS domain Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 493 502 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_2051 3d3a7c76bb1e0abbeb522df7c73e90fc 590 SUPERFAMILY SSF46689 493 588 9.86E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0148 4b98a66f0da4afe17db8ae068f324c4a 233 Gene3D G3DSA:3.40.50.300 1 193 3.9E-25 T 11-10-2018 Clos_0148 4b98a66f0da4afe17db8ae068f324c4a 233 SUPERFAMILY SSF52540 1 146 4.53E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0148 4b98a66f0da4afe17db8ae068f324c4a 233 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 161 3.9E-12 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Clos_0148 4b98a66f0da4afe17db8ae068f324c4a 233 PIRSF PIRSF005624 1 198 4.9E-50 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Clos_2687 dafbd4533e5969f31ab4e9a3a628ec31 248 Pfam PF04055 Radical SAM superfamily 30 180 1.7E-22 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_2687 dafbd4533e5969f31ab4e9a3a628ec31 248 PIRSF PIRSF000371 1 55 8.1E-21 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Clos_2687 dafbd4533e5969f31ab4e9a3a628ec31 248 PIRSF PIRSF000371 50 248 4.3E-51 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 Clos_2687 dafbd4533e5969f31ab4e9a3a628ec31 248 Gene3D G3DSA:3.20.20.70 7 248 6.8E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2687 dafbd4533e5969f31ab4e9a3a628ec31 248 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 55 242 9.7E-57 T 11-10-2018 Clos_2687 dafbd4533e5969f31ab4e9a3a628ec31 248 Pfam PF13353 4Fe-4S single cluster domain 22 130 2.2E-16 T 11-10-2018 Clos_2687 dafbd4533e5969f31ab4e9a3a628ec31 248 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Clos_2687 dafbd4533e5969f31ab4e9a3a628ec31 248 SUPERFAMILY SSF102114 32 237 3.79E-26 T 11-10-2018 Clos_2877 c7e10594e0dfd3e955b3bd6d615afae3 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2877 c7e10594e0dfd3e955b3bd6d615afae3 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.315 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2877 c7e10594e0dfd3e955b3bd6d615afae3 44 Pfam PF00468 Ribosomal protein L34 2 44 7.4E-22 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2877 c7e10594e0dfd3e955b3bd6d615afae3 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 30 4.0E-7 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2877 c7e10594e0dfd3e955b3bd6d615afae3 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 6.8E-20 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2744 dfc293a006c03e3f1fecb5870e339df2 123 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 2.4E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2744 dfc293a006c03e3f1fecb5870e339df2 123 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 2.4E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2744 dfc293a006c03e3f1fecb5870e339df2 123 SUPERFAMILY SSF46689 5 53 9.86E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2744 dfc293a006c03e3f1fecb5870e339df2 123 SUPERFAMILY SSF46689 56 110 3.05E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2744 dfc293a006c03e3f1fecb5870e339df2 123 Pfam PF12833 Helix-turn-helix domain 28 104 1.5E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2744 dfc293a006c03e3f1fecb5870e339df2 123 Gene3D G3DSA:1.10.10.60 53 110 4.0E-16 T 11-10-2018 Clos_2744 dfc293a006c03e3f1fecb5870e339df2 123 Gene3D G3DSA:1.10.10.60 2 52 1.3E-14 T 11-10-2018 Clos_2744 dfc293a006c03e3f1fecb5870e339df2 123 SMART SM00342 20 103 1.1E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2744 dfc293a006c03e3f1fecb5870e339df2 123 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 57 99 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_1213 321e11bcd39ad73db56b33b095cae74c 142 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 3 131 8.3E-32 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 Clos_1213 321e11bcd39ad73db56b33b095cae74c 142 SUPERFAMILY SSF47188 2 131 3.01E-28 T 11-10-2018 IPR035938 Hemerythrin-like superfamily Clos_1213 321e11bcd39ad73db56b33b095cae74c 142 Pfam PF01814 Hemerythrin HHE cation binding domain 10 129 9.0E-10 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Clos_1213 321e11bcd39ad73db56b33b095cae74c 142 Gene3D G3DSA:1.20.120.50 1 138 4.0E-32 T 11-10-2018 IPR035938 Hemerythrin-like superfamily Clos_1618 9681042e9e762c0ba55c121623b1dfca 393 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 1 386 4.4E-116 T 11-10-2018 IPR014194 Sporulation stage III, protein AE Clos_1618 9681042e9e762c0ba55c121623b1dfca 393 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 66 386 1.0E-111 T 11-10-2018 IPR014194 Sporulation stage III, protein AE Clos_0275 44f223bd749530149320a14c8aa3dbb7 170 Gene3D G3DSA:3.40.30.10 84 165 6.2E-30 T 11-10-2018 Clos_0275 44f223bd749530149320a14c8aa3dbb7 170 PIRSF PIRSF000216 3 170 5.4E-56 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0275 44f223bd749530149320a14c8aa3dbb7 170 SUPERFAMILY SSF52833 19 168 1.68E-50 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0275 44f223bd749530149320a14c8aa3dbb7 170 Gene3D G3DSA:1.10.10.1590 13 83 2.8E-16 T 11-10-2018 Clos_0275 44f223bd749530149320a14c8aa3dbb7 170 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 166 1.7E-53 T 11-10-2018 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 Pfam PF07478 D-ala D-ala ligase C-terminus 150 344 2.5E-60 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 SUPERFAMILY SSF52440 3 136 6.52E-37 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 PIRSF PIRSF039102 2 349 8.8E-110 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 Pfam PF01820 D-ala D-ala ligase N-terminus 6 128 7.0E-32 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 Gene3D G3DSA:3.30.1490.20 155 221 4.2E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 289 317 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 347 36.99 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 Gene3D G3DSA:3.30.470.20 132 343 4.2E-69 T 11-10-2018 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 Gene3D G3DSA:3.40.50.20 2 127 6.7E-41 T 11-10-2018 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 105 116 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 344 8.2E-94 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2860 4d5e39495bf22e3e6fe20455af4004da 349 SUPERFAMILY SSF56059 138 343 2.12E-48 T 11-10-2018 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 SUPERFAMILY SSF52540 149 382 2.3E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 451 8.8E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 414 431 8.8E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 Pfam PF00158 Sigma-54 interaction domain 147 311 5.4E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 Pfam PF00072 Response regulator receiver domain 7 114 1.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 Gene3D G3DSA:1.10.8.60 315 381 2.3E-20 T 11-10-2018 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 Pfam PF02954 Bacterial regulatory protein, Fis family 410 448 3.5E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 Gene3D G3DSA:1.10.10.60 400 452 6.7E-15 T 11-10-2018 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 Gene3D G3DSA:3.40.50.2300 5 124 8.5E-34 T 11-10-2018 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 SMART SM00382 164 307 3.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 Gene3D G3DSA:3.40.50.300 129 314 4.6E-62 T 11-10-2018 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 SUPERFAMILY SSF46689 358 450 7.17E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 SUPERFAMILY SSF52172 6 188 1.24E-39 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2825 3853ec7ae9a72025d0feb452fa86dfdf 457 SMART SM00448 5 117 8.2E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2191 7d08eb9a25262d85fd025e241d517558 302 Gene3D G3DSA:3.20.20.70 2 302 1.8E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2191 7d08eb9a25262d85fd025e241d517558 302 SUPERFAMILY SSF51395 5 301 8.43E-89 T 11-10-2018 Clos_2191 7d08eb9a25262d85fd025e241d517558 302 PIRSF PIRSF000164 2 302 3.4E-83 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Clos_2191 7d08eb9a25262d85fd025e241d517558 302 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 6 302 41.593 T 11-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 Clos_2191 7d08eb9a25262d85fd025e241d517558 302 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 240 260 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Clos_2191 7d08eb9a25262d85fd025e241d517558 302 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 8 300 7.7E-118 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Clos_2191 7d08eb9a25262d85fd025e241d517558 302 Pfam PF01180 Dihydroorotate dehydrogenase 8 287 1.6E-77 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Clos_2571 f72d2bf8d49cadf69d45ef5b7463af6a 145 PIRSF PIRSF006019 1 145 3.7E-57 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Clos_2571 f72d2bf8d49cadf69d45ef5b7463af6a 145 SUPERFAMILY SSF53927 6 143 9.31E-43 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Clos_2571 f72d2bf8d49cadf69d45ef5b7463af6a 145 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 112 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Clos_2571 f72d2bf8d49cadf69d45ef5b7463af6a 145 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 122 3.7E-29 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Clos_2571 f72d2bf8d49cadf69d45ef5b7463af6a 145 Gene3D G3DSA:3.40.140.10 1 145 6.6E-50 T 11-10-2018 Clos_0214 ab55fd95051fd7549dfee9b7bd767942 264 Gene3D G3DSA:3.40.50.300 2 257 3.0E-65 T 11-10-2018 Clos_0214 ab55fd95051fd7549dfee9b7bd767942 264 SMART SM00382 29 217 1.1E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0214 ab55fd95051fd7549dfee9b7bd767942 264 SUPERFAMILY SSF52540 4 230 3.13E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0214 ab55fd95051fd7549dfee9b7bd767942 264 Pfam PF00005 ABC transporter 20 169 1.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0214 ab55fd95051fd7549dfee9b7bd767942 264 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2489 8f92d0e72401d711a55ad7256a61cd20 126 Pfam PF02561 Flagellar protein FliS 8 119 5.3E-39 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Clos_2489 8f92d0e72401d711a55ad7256a61cd20 126 SUPERFAMILY SSF101116 4 122 1.44E-39 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Clos_2489 8f92d0e72401d711a55ad7256a61cd20 126 PIRSF PIRSF039090 1 126 1.5E-36 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Clos_2489 8f92d0e72401d711a55ad7256a61cd20 126 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 119 2.8E-34 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Clos_2489 8f92d0e72401d711a55ad7256a61cd20 126 Gene3D G3DSA:1.20.120.340 1 121 1.4E-39 T 11-10-2018 Clos_2666 7950ff62698c330bf24cee9413d26d7b 477 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 463 1.7E-182 T 11-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 Clos_2666 7950ff62698c330bf24cee9413d26d7b 477 Gene3D G3DSA:3.20.140.10 6 467 7.4E-211 T 11-10-2018 Clos_2666 7950ff62698c330bf24cee9413d26d7b 477 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 153 353 1.3E-10 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Clos_2666 7950ff62698c330bf24cee9413d26d7b 477 SUPERFAMILY SSF54675 3 134 4.71E-49 T 11-10-2018 Clos_2666 7950ff62698c330bf24cee9413d26d7b 477 SUPERFAMILY SSF51690 135 474 6.18E-135 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Clos_2666 7950ff62698c330bf24cee9413d26d7b 477 PIRSF PIRSF000484 1 477 2.1E-164 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Clos_2666 7950ff62698c330bf24cee9413d26d7b 477 Gene3D G3DSA:3.20.20.70 147 316 7.4E-211 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0537 dc7d973c077d5fb3250d627db51018ec 168 SUPERFAMILY SSF52255 4 167 8.5E-68 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Clos_0537 dc7d973c077d5fb3250d627db51018ec 168 PIRSF PIRSF001338 1 164 6.5E-76 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Clos_0537 dc7d973c077d5fb3250d627db51018ec 168 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 157 33.599 T 11-10-2018 IPR033747 Class I PurE Clos_0537 dc7d973c077d5fb3250d627db51018ec 168 Gene3D G3DSA:3.40.50.7700 1 168 7.4E-76 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Clos_0537 dc7d973c077d5fb3250d627db51018ec 168 SMART SM01001 4 153 1.2E-97 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Clos_0537 dc7d973c077d5fb3250d627db51018ec 168 Pfam PF00731 AIR carboxylase 6 150 3.3E-66 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Clos_0537 dc7d973c077d5fb3250d627db51018ec 168 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 160 1.6E-66 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Clos_1505 f7ac6e91aa363acbcee1e202711fd5db 358 Gene3D G3DSA:3.40.50.2300 4 144 1.7E-34 T 11-10-2018 Clos_1505 f7ac6e91aa363acbcee1e202711fd5db 358 SMART SM00448 7 119 6.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1505 f7ac6e91aa363acbcee1e202711fd5db 358 SUPERFAMILY SSF52738 166 355 4.97E-64 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal Clos_1505 f7ac6e91aa363acbcee1e202711fd5db 358 Pfam PF00072 Response regulator receiver domain 9 113 1.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1505 f7ac6e91aa363acbcee1e202711fd5db 358 PIRSF PIRSF000876 4 358 3.9E-137 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Clos_1505 f7ac6e91aa363acbcee1e202711fd5db 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 7 357 40.33 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Clos_1505 f7ac6e91aa363acbcee1e202711fd5db 358 Pfam PF01339 CheB methylesterase 171 352 2.5E-63 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Clos_1505 f7ac6e91aa363acbcee1e202711fd5db 358 SUPERFAMILY SSF52172 5 125 9.82E-30 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1505 f7ac6e91aa363acbcee1e202711fd5db 358 Gene3D G3DSA:3.40.50.180 161 357 4.7E-73 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 SUPERFAMILY SSF74731 3 116 3.27E-49 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 Gene3D G3DSA:1.10.1900.20 56 119 5.6E-30 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.075 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 Gene3D G3DSA:1.10.720.90 2 55 1.6E-23 T 11-10-2018 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 68 2.0E-19 T 11-10-2018 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-39 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.2E-49 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 Pfam PF00453 Ribosomal protein L20 3 109 7.1E-48 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1976 cd7d00e61259c2e9bcbcb03beee5b95b 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0067 fe01eab26a92dcca745161d0d46395ef 446 PIRSF PIRSF006815 2 446 2.2E-200 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Clos_0067 fe01eab26a92dcca745161d0d46395ef 446 SUPERFAMILY SSF53383 2 444 2.34E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_0067 fe01eab26a92dcca745161d0d46395ef 446 Pfam PF02347 Glycine cleavage system P-protein 2 442 1.7E-144 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Clos_0067 fe01eab26a92dcca745161d0d46395ef 446 Gene3D G3DSA:3.90.1150.10 72 442 5.4E-168 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_0067 fe01eab26a92dcca745161d0d46395ef 446 Gene3D G3DSA:3.40.640.10 83 348 5.4E-168 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0067 fe01eab26a92dcca745161d0d46395ef 446 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 2 446 48.97 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Clos_2701 794762dce4ced46f048ef2c3a056ab07 232 SUPERFAMILY SSF46894 127 228 1.22E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_2701 794762dce4ced46f048ef2c3a056ab07 232 SUPERFAMILY SSF52172 1 127 1.35E-39 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2701 794762dce4ced46f048ef2c3a056ab07 232 Gene3D G3DSA:1.10.10.10 127 231 1.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2701 794762dce4ced46f048ef2c3a056ab07 232 SMART SM00448 2 112 8.2E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2701 794762dce4ced46f048ef2c3a056ab07 232 Gene3D G3DSA:3.40.50.2300 1 126 6.1E-36 T 11-10-2018 Clos_2701 794762dce4ced46f048ef2c3a056ab07 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 4.0E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_2701 794762dce4ced46f048ef2c3a056ab07 232 SMART SM00862 152 227 1.3E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_2701 794762dce4ced46f048ef2c3a056ab07 232 Pfam PF00072 Response regulator receiver domain 4 113 1.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2581 f2ad0bece17db4bce9b222e1c3e22ce6 289 SUPERFAMILY SSF53335 4 286 3.5E-57 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2581 f2ad0bece17db4bce9b222e1c3e22ce6 289 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 288 44.631 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Clos_2581 f2ad0bece17db4bce9b222e1c3e22ce6 289 Gene3D G3DSA:1.10.8.10 3 86 1.2E-23 T 11-10-2018 Clos_2581 f2ad0bece17db4bce9b222e1c3e22ce6 289 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 192 198 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Clos_2581 f2ad0bece17db4bce9b222e1c3e22ce6 289 Pfam PF13847 Methyltransferase domain 117 251 2.7E-14 T 11-10-2018 IPR025714 Methyltransferase domain Clos_2581 f2ad0bece17db4bce9b222e1c3e22ce6 289 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 22 288 1.1E-74 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Clos_2581 f2ad0bece17db4bce9b222e1c3e22ce6 289 Gene3D G3DSA:3.40.50.150 87 289 1.1E-65 T 11-10-2018 Clos_2581 f2ad0bece17db4bce9b222e1c3e22ce6 289 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 284 1.6E-86 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Clos_0712 b8b48c7b5d8a92f04da94c736987db59 313 Gene3D G3DSA:3.40.50.720 95 280 1.1E-83 T 11-10-2018 Clos_0712 b8b48c7b5d8a92f04da94c736987db59 313 SUPERFAMILY SSF51735 96 277 4.49E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0712 b8b48c7b5d8a92f04da94c736987db59 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 275 5.2E-53 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Clos_0712 b8b48c7b5d8a92f04da94c736987db59 313 Gene3D G3DSA:3.40.50.720 22 305 1.1E-83 T 11-10-2018 Clos_0712 b8b48c7b5d8a92f04da94c736987db59 313 SUPERFAMILY SSF52283 2 124 4.89E-15 T 11-10-2018 Clos_0712 b8b48c7b5d8a92f04da94c736987db59 313 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 308 1.1E-10 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Clos_2723 0f0270a918e967638528d6963f57112c 284 SUPERFAMILY SSF55729 12 140 1.39E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2723 0f0270a918e967638528d6963f57112c 284 Gene3D G3DSA:3.40.630.30 158 272 3.5E-8 T 11-10-2018 Clos_2723 0f0270a918e967638528d6963f57112c 284 Pfam PF00583 Acetyltransferase (GNAT) family 35 135 1.7E-13 T 11-10-2018 IPR000182 GNAT domain Clos_2723 0f0270a918e967638528d6963f57112c 284 SUPERFAMILY SSF55729 184 275 1.15E-9 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2723 0f0270a918e967638528d6963f57112c 284 Pfam PF13673 Acetyltransferase (GNAT) domain 195 276 3.9E-7 T 11-10-2018 IPR000182 GNAT domain Clos_2723 0f0270a918e967638528d6963f57112c 284 Gene3D G3DSA:3.40.630.30 1 145 7.3E-21 T 11-10-2018 Clos_1507 6989661ce152c83c51cc3e59bd979539 145 Gene3D G3DSA:2.30.30.40 8 133 4.5E-40 T 11-10-2018 Clos_1507 6989661ce152c83c51cc3e59bd979539 145 SMART SM00260 2 139 3.7E-32 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Clos_1507 6989661ce152c83c51cc3e59bd979539 145 Pfam PF01584 CheW-like domain 6 139 3.1E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Clos_1507 6989661ce152c83c51cc3e59bd979539 145 SUPERFAMILY SSF50341 4 139 3.53E-35 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Clos_1507 6989661ce152c83c51cc3e59bd979539 145 Gene3D G3DSA:2.40.50.180 25 134 4.5E-40 T 11-10-2018 Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 SUPERFAMILY SSF54631 275 395 4.93E-17 T 11-10-2018 Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 Gene3D G3DSA:3.40.50.300 2 268 2.0E-73 T 11-10-2018 Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 SUPERFAMILY SSF52540 38 263 1.28E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 35 391 1.1E-152 T 11-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 Gene3D G3DSA:3.10.580.10 277 390 1.1E-13 T 11-10-2018 Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 Pfam PF00571 CBS domain 338 389 1.5E-4 T 11-10-2018 IPR000644 CBS domain Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 SMART SM00116 343 389 2.5 T 11-10-2018 IPR000644 CBS domain Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 SMART SM00116 281 330 2.8 T 11-10-2018 IPR000644 CBS domain Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 SMART SM00382 52 249 1.2E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2021 e2e4b93fe865599922041f274d4c7e08 404 Pfam PF00005 ABC transporter 44 191 3.6E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 463 46.391 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 Gene3D G3DSA:3.30.930.10 106 462 7.7E-116 T 11-10-2018 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 Gene3D G3DSA:2.40.50.140 2 105 2.4E-17 T 11-10-2018 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 463 8.7E-194 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 457 9.5E-86 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 SUPERFAMILY SSF55681 104 461 3.83E-98 T 11-10-2018 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 SUPERFAMILY SSF50249 12 102 8.57E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 205 217 9.3E-13 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 418 432 9.3E-13 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 221 234 9.3E-13 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2341 b4e43995cbf9367e6aa0097821e2fdea 463 PRINTS PR01042 Aspartyl-tRNA synthetase signature 378 394 9.3E-13 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1434 ec042924f4f99694ad755988109a8fe9 651 Gene3D G3DSA:3.30.200.20 1 89 4.4E-32 T 11-10-2018 Clos_1434 ec042924f4f99694ad755988109a8fe9 651 Gene3D G3DSA:3.30.10.20 356 423 1.3E-13 T 11-10-2018 Clos_1434 ec042924f4f99694ad755988109a8fe9 651 Gene3D G3DSA:3.30.10.20 424 490 1.6E-13 T 11-10-2018 Clos_1434 ec042924f4f99694ad755988109a8fe9 651 Gene3D G3DSA:3.30.10.20 492 561 1.6E-18 T 11-10-2018 Clos_1434 ec042924f4f99694ad755988109a8fe9 651 Pfam PF00069 Protein kinase domain 10 260 8.1E-58 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Clos_1434 ec042924f4f99694ad755988109a8fe9 651 Pfam PF03793 PASTA domain 427 487 3.0E-9 T 11-10-2018 IPR005543 PASTA domain Clos_1434 ec042924f4f99694ad755988109a8fe9 651 Pfam PF03793 PASTA domain 495 558 3.0E-15 T 11-10-2018 IPR005543 PASTA domain Clos_1434 ec042924f4f99694ad755988109a8fe9 651 Pfam PF03793 PASTA domain 360 420 1.4E-10 T 11-10-2018 IPR005543 PASTA domain Clos_1434 ec042924f4f99694ad755988109a8fe9 651 Gene3D G3DSA:1.10.510.10 91 281 2.3E-53 T 11-10-2018 Clos_1434 ec042924f4f99694ad755988109a8fe9 651 SMART SM00740 422 488 2.0E-8 T 11-10-2018 IPR005543 PASTA domain Clos_1434 ec042924f4f99694ad755988109a8fe9 651 SMART SM00740 491 558 1.8E-12 T 11-10-2018 IPR005543 PASTA domain Clos_1434 ec042924f4f99694ad755988109a8fe9 651 SMART SM00740 356 421 4.3E-12 T 11-10-2018 IPR005543 PASTA domain Clos_1434 ec042924f4f99694ad755988109a8fe9 651 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Clos_1434 ec042924f4f99694ad755988109a8fe9 651 SMART SM00220 10 267 1.5E-75 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Clos_1434 ec042924f4f99694ad755988109a8fe9 651 SUPERFAMILY SSF56112 7 269 8.36E-83 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Clos_1434 ec042924f4f99694ad755988109a8fe9 651 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Clos_1790 83914ddcc229fda6fe0363168fdb9c1a 339 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 9 335 1.5E-151 T 11-10-2018 IPR010894 Stage V sporulation AD Clos_1790 83914ddcc229fda6fe0363168fdb9c1a 339 Gene3D G3DSA:3.40.47.40 3 339 4.3E-151 T 11-10-2018 IPR038369 Stage V sporulation AD superfamily Clos_1790 83914ddcc229fda6fe0363168fdb9c1a 339 SUPERFAMILY SSF53901 58 315 4.16E-15 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_1790 83914ddcc229fda6fe0363168fdb9c1a 339 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 7 335 2.8E-163 T 11-10-2018 IPR010894 Stage V sporulation AD Clos_1790 83914ddcc229fda6fe0363168fdb9c1a 339 PIRSF PIRSF011570 3 338 2.4E-156 T 11-10-2018 IPR010894 Stage V sporulation AD Clos_0215 0cfc8015e818768605baead5325e6b08 363 Gene3D G3DSA:3.40.50.1980 40 362 3.7E-74 T 11-10-2018 Clos_0215 0cfc8015e818768605baead5325e6b08 363 SUPERFAMILY SSF53807 55 360 1.26E-48 T 11-10-2018 Clos_0215 0cfc8015e818768605baead5325e6b08 363 Pfam PF01497 Periplasmic binding protein 95 301 2.8E-19 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_2700 6e1766788faa48832f94f8ef13e83482 775 SMART SM00388 555 621 8.0E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2700 6e1766788faa48832f94f8ef13e83482 775 Gene3D G3DSA:1.10.287.130 549 620 1.4E-19 T 11-10-2018 Clos_2700 6e1766788faa48832f94f8ef13e83482 775 Pfam PF00512 His Kinase A (phospho-acceptor) domain 555 621 1.1E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_2700 6e1766788faa48832f94f8ef13e83482 775 SUPERFAMILY SSF47384 544 622 1.61E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_2700 6e1766788faa48832f94f8ef13e83482 775 SMART SM00387 667 774 4.6E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2700 6e1766788faa48832f94f8ef13e83482 775 Gene3D G3DSA:3.30.565.10 621 773 9.9E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2700 6e1766788faa48832f94f8ef13e83482 775 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 668 759 1.8E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2700 6e1766788faa48832f94f8ef13e83482 775 SUPERFAMILY SSF55874 624 759 3.16E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2762 3dad58bd7ade8ecc5f9379c6e2422fc6 287 SUPERFAMILY SSF141571 64 279 3.66E-17 T 11-10-2018 Clos_2762 3dad58bd7ade8ecc5f9379c6e2422fc6 287 Gene3D G3DSA:2.160.20.80 174 268 1.6E-14 T 11-10-2018 Clos_2762 3dad58bd7ade8ecc5f9379c6e2422fc6 287 Pfam PF00805 Pentapeptide repeats (8 copies) 223 256 1.9E-7 T 11-10-2018 IPR001646 Pentapeptide repeat Clos_1515 921854529fa712ef12c66573b252fa52 236 Gene3D G3DSA:3.40.1160.10 3 236 8.8E-80 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Clos_1515 921854529fa712ef12c66573b252fa52 236 SUPERFAMILY SSF53633 4 235 3.53E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Clos_1515 921854529fa712ef12c66573b252fa52 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 234 3.9E-98 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Clos_1515 921854529fa712ef12c66573b252fa52 236 Pfam PF00696 Amino acid kinase family 7 213 3.3E-28 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Clos_1515 921854529fa712ef12c66573b252fa52 236 PIRSF PIRSF005650 2 236 9.7E-94 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Clos_1515 921854529fa712ef12c66573b252fa52 236 PRINTS PR00474 Glutamate 5-kinase family signature 6 20 2.2E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Clos_1515 921854529fa712ef12c66573b252fa52 236 PRINTS PR00474 Glutamate 5-kinase family signature 139 166 2.2E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Clos_1515 921854529fa712ef12c66573b252fa52 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 235 44.483 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Clos_0464 a1c6b6d1b9413a575988d343f77341f3 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.768 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Clos_0464 a1c6b6d1b9413a575988d343f77341f3 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 1.7E-67 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Clos_0464 a1c6b6d1b9413a575988d343f77341f3 157 Gene3D G3DSA:3.30.1330.50 1 157 2.6E-69 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Clos_0464 a1c6b6d1b9413a575988d343f77341f3 157 SUPERFAMILY SSF69765 1 156 5.76E-66 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Clos_0464 a1c6b6d1b9413a575988d343f77341f3 157 Pfam PF02542 YgbB family 1 154 2.5E-66 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Clos_0464 a1c6b6d1b9413a575988d343f77341f3 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Clos_2410 806143c76ed001f632347660f07088a6 353 Gene3D G3DSA:3.40.50.920 235 350 3.2E-25 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_2410 806143c76ed001f632347660f07088a6 353 SUPERFAMILY SSF52922 238 351 3.93E-27 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_2410 806143c76ed001f632347660f07088a6 353 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 238 3.8E-50 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Clos_2410 806143c76ed001f632347660f07088a6 353 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 247 340 7.2E-24 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clos_2410 806143c76ed001f632347660f07088a6 353 SUPERFAMILY SSF52518 1 237 5.45E-62 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_2410 806143c76ed001f632347660f07088a6 353 Gene3D G3DSA:3.40.50.970 1 189 9.0E-62 T 11-10-2018 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 343 29.147 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 Gene3D G3DSA:3.30.300.20 277 345 4.5E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 SMART SM00316 133 199 2.3E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 SUPERFAMILY SSF50249 132 198 4.68E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 Pfam PF00575 S1 RNA binding domain 135 194 1.2E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 Pfam PF08529 NusA N-terminal domain 4 123 1.7E-43 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 SUPERFAMILY SSF54814 279 341 3.4E-15 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 Gene3D G3DSA:3.30.300.20 198 276 1.3E-35 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 Gene3D G3DSA:3.30.1480.10 1 124 5.7E-46 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 Pfam PF13184 NusA-like KH domain 229 293 6.9E-28 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 SUPERFAMILY SSF54814 199 277 1.5E-30 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 SMART SM00322 300 344 5.6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 SMART SM00322 229 288 0.62 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.1E-132 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 SUPERFAMILY SSF69705 1 125 1.44E-42 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Clos_1525 87b813036011f730f345a3f7a37d6a8e 345 Gene3D G3DSA:2.40.50.140 136 197 5.1E-25 T 11-10-2018 Clos_2276 4acc4aa4c49f045412c7165e8537a725 122 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 21 103 2.0E-22 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Clos_2276 4acc4aa4c49f045412c7165e8537a725 122 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 120 2.1E-30 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Clos_2276 4acc4aa4c49f045412c7165e8537a725 122 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 122 20.941 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Clos_2276 4acc4aa4c49f045412c7165e8537a725 122 Gene3D G3DSA:3.90.470.20 1 122 1.8E-39 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Clos_2276 4acc4aa4c49f045412c7165e8537a725 122 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 120 1.9E-29 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Clos_2276 4acc4aa4c49f045412c7165e8537a725 122 SUPERFAMILY SSF56214 1 120 1.31E-29 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Clos_2276 4acc4aa4c49f045412c7165e8537a725 122 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 102 2.5E-20 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Clos_0617 d26127844adfa5d32f4a751b81534d35 164 SUPERFAMILY SSF47240 2 128 1.73E-36 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_0617 d26127844adfa5d32f4a751b81534d35 164 Gene3D G3DSA:1.20.1260.10 1 130 4.4E-45 T 11-10-2018 IPR012347 Ferritin-like Clos_0617 d26127844adfa5d32f4a751b81534d35 164 SUPERFAMILY SSF57802 129 163 7.38E-5 T 11-10-2018 Clos_0617 d26127844adfa5d32f4a751b81534d35 164 Pfam PF02915 Rubrerythrin 8 122 5.9E-19 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Clos_0617 d26127844adfa5d32f4a751b81534d35 164 Gene3D G3DSA:2.20.28.10 132 164 1.7E-5 T 11-10-2018 Clos_2118 ee6b4ede6e0556c99d202bffb8d0ccc1 275 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 274 1.4E-82 T 11-10-2018 IPR003797 DegV Clos_2118 ee6b4ede6e0556c99d202bffb8d0ccc1 275 Gene3D G3DSA:3.40.50.10170 1 153 3.5E-47 T 11-10-2018 Clos_2118 ee6b4ede6e0556c99d202bffb8d0ccc1 275 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 274 1.0E-87 T 11-10-2018 IPR003797 DegV Clos_2118 ee6b4ede6e0556c99d202bffb8d0ccc1 275 SUPERFAMILY SSF82549 1 274 1.15E-80 T 11-10-2018 Clos_2118 ee6b4ede6e0556c99d202bffb8d0ccc1 275 Gene3D G3DSA:3.30.1180.10 157 275 3.5E-37 T 11-10-2018 Clos_0755 66bde2bb826d6031a01499ad0b38fa1b 249 SUPERFAMILY SSF52540 4 232 4.11E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0755 66bde2bb826d6031a01499ad0b38fa1b 249 Pfam PF00005 ABC transporter 20 169 8.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0755 66bde2bb826d6031a01499ad0b38fa1b 249 SMART SM00382 29 217 5.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0755 66bde2bb826d6031a01499ad0b38fa1b 249 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0755 66bde2bb826d6031a01499ad0b38fa1b 249 Gene3D G3DSA:3.40.50.300 1 223 6.3E-63 T 11-10-2018 Clos_0503 a1bc75993f842689864ed42c60712d2a 102 Pfam PF00467 KOW motif 5 36 1.6E-9 T 11-10-2018 IPR005824 KOW Clos_0503 a1bc75993f842689864ed42c60712d2a 102 SUPERFAMILY SSF50104 1 100 4.14E-37 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Clos_0503 a1bc75993f842689864ed42c60712d2a 102 SMART SM00739 2 29 1.6E-6 T 11-10-2018 IPR005824 KOW Clos_0503 a1bc75993f842689864ed42c60712d2a 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 1.1E-27 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0503 a1bc75993f842689864ed42c60712d2a 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 101 3.8E-39 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0503 a1bc75993f842689864ed42c60712d2a 102 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0503 a1bc75993f842689864ed42c60712d2a 102 Gene3D G3DSA:2.30.30.30 1 100 8.8E-40 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Clos_0503 a1bc75993f842689864ed42c60712d2a 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 20.842 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2248 61915354aca617270b3473646c339f54 165 SUPERFAMILY SSF47240 3 156 3.61E-24 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_2248 61915354aca617270b3473646c339f54 165 Pfam PF02915 Rubrerythrin 8 151 8.7E-12 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Clos_2248 61915354aca617270b3473646c339f54 165 Gene3D G3DSA:1.20.1260.10 1 154 2.2E-24 T 11-10-2018 IPR012347 Ferritin-like Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 SUPERFAMILY SSF50341 7 154 1.01E-35 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 SUPERFAMILY SSF52172 172 300 4.27E-25 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 Gene3D G3DSA:3.40.50.2300 171 303 4.1E-26 T 11-10-2018 Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 Pfam PF01584 CheW-like domain 18 152 2.3E-33 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 PIRSF PIRSF002867 1 303 1.3E-100 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 Gene3D G3DSA:2.40.50.180 34 150 5.5E-35 T 11-10-2018 Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 Pfam PF00072 Response regulator receiver domain 177 298 6.9E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 Gene3D G3DSA:2.30.30.40 19 144 5.5E-35 T 11-10-2018 Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 SMART SM00260 13 150 2.3E-28 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Clos_1960 c613b868cf9a426d7544ed25106f4b74 303 SMART SM00448 175 298 2.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1181 dcc5627ed9317766714a93f0e460f1c1 582 Gene3D G3DSA:3.40.50.300 328 580 5.6E-85 T 11-10-2018 Clos_1181 dcc5627ed9317766714a93f0e460f1c1 582 SUPERFAMILY SSF90123 5 320 6.02E-73 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1181 dcc5627ed9317766714a93f0e460f1c1 582 Pfam PF00005 ABC transporter 354 501 6.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1181 dcc5627ed9317766714a93f0e460f1c1 582 Pfam PF00664 ABC transporter transmembrane region 19 291 1.9E-45 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_1181 dcc5627ed9317766714a93f0e460f1c1 582 SUPERFAMILY SSF52540 326 574 5.02E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1181 dcc5627ed9317766714a93f0e460f1c1 582 SMART SM00382 363 555 1.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1181 dcc5627ed9317766714a93f0e460f1c1 582 Gene3D G3DSA:1.20.1560.10 1 319 4.9E-82 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 Gene3D G3DSA:3.30.420.10 1 158 4.5E-56 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 6.1E-55 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 48.747 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 SUPERFAMILY SSF53098 1 156 5.82E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.9E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 1.9E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.9E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.9E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.9E-34 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 4.1E-50 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Clos_1727 c3f3b07b4443d74ed9969f79087ce4e9 164 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 148 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Clos_1699 f40780609381ade24c526fe61caa8c3c 348 Gene3D G3DSA:3.40.50.720 1 159 4.7E-28 T 11-10-2018 Clos_1699 f40780609381ade24c526fe61caa8c3c 348 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 104 8.9E-6 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Clos_1699 f40780609381ade24c526fe61caa8c3c 348 SUPERFAMILY SSF51735 3 153 1.71E-17 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1218 fd27deddb9e92293887c932643998cd8 529 Pfam PF03880 DbpA RNA binding domain 454 525 2.8E-27 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Clos_1218 fd27deddb9e92293887c932643998cd8 529 SMART SM00487 24 222 3.0E-67 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Clos_1218 fd27deddb9e92293887c932643998cd8 529 SMART SM00490 258 339 1.6E-34 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1218 fd27deddb9e92293887c932643998cd8 529 Pfam PF00271 Helicase conserved C-terminal domain 230 339 3.0E-30 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1218 fd27deddb9e92293887c932643998cd8 529 Gene3D G3DSA:3.40.50.300 215 456 1.3E-54 T 11-10-2018 Clos_1218 fd27deddb9e92293887c932643998cd8 529 SUPERFAMILY SSF52540 74 359 2.78E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1218 fd27deddb9e92293887c932643998cd8 529 Gene3D G3DSA:3.40.50.300 5 211 1.6E-78 T 11-10-2018 Clos_1218 fd27deddb9e92293887c932643998cd8 529 Gene3D G3DSA:3.30.70.330 457 528 2.2E-23 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Clos_1218 fd27deddb9e92293887c932643998cd8 529 Pfam PF00270 DEAD/DEAH box helicase 29 195 1.1E-53 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 146 1.9E-24 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 499 37.245 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 Gene3D G3DSA:3.40.630.10 176 497 2.0E-130 T 11-10-2018 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 SUPERFAMILY SSF53187 181 496 2.3E-118 T 11-10-2018 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 PRINTS PR00481 Cytosol aminopeptidase signature 371 386 1.2E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 PRINTS PR00481 Cytosol aminopeptidase signature 321 342 1.2E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 PRINTS PR00481 Cytosol aminopeptidase signature 284 305 1.2E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 PRINTS PR00481 Cytosol aminopeptidase signature 343 363 1.2E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 PRINTS PR00481 Cytosol aminopeptidase signature 262 279 1.2E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 Gene3D G3DSA:3.40.220.10 1 175 8.2E-44 T 11-10-2018 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 347 354 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 490 7.7E-124 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Clos_0278 e3419ee81e7740a1915b5671ce0cd819 499 SUPERFAMILY SSF52949 1 183 1.62E-29 T 11-10-2018 Clos_2846 357dfff76456a14419506c79d8160619 292 Gene3D G3DSA:1.10.10.60 58 116 7.3E-14 T 11-10-2018 Clos_2846 357dfff76456a14419506c79d8160619 292 SMART SM00871 128 287 1.3E-35 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding Clos_2846 357dfff76456a14419506c79d8160619 292 SUPERFAMILY SSF46689 6 55 1.79E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2846 357dfff76456a14419506c79d8160619 292 SUPERFAMILY SSF55136 128 289 1.07E-29 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_2846 357dfff76456a14419506c79d8160619 292 SMART SM00342 21 104 2.6E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2846 357dfff76456a14419506c79d8160619 292 Pfam PF12833 Helix-turn-helix domain 28 105 8.6E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2846 357dfff76456a14419506c79d8160619 292 Gene3D G3DSA:1.10.10.60 2 57 2.9E-14 T 11-10-2018 Clos_2846 357dfff76456a14419506c79d8160619 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2846 357dfff76456a14419506c79d8160619 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_2846 357dfff76456a14419506c79d8160619 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_2846 357dfff76456a14419506c79d8160619 292 Pfam PF06445 GyrI-like small molecule binding domain 128 286 3.3E-28 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain Clos_2846 357dfff76456a14419506c79d8160619 292 SUPERFAMILY SSF46689 57 116 3.76E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2846 357dfff76456a14419506c79d8160619 292 Gene3D G3DSA:3.20.80.10 128 291 7.6E-39 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_2659 a29aed7f505f031ad99cfdacd34f33aa 345 SUPERFAMILY SSF50685 275 335 1.08E-11 T 11-10-2018 IPR036908 RlpA-like domain superfamily Clos_2659 a29aed7f505f031ad99cfdacd34f33aa 345 Pfam PF07501 G5 domain 153 224 6.3E-20 T 11-10-2018 IPR011098 G5 domain Clos_2659 a29aed7f505f031ad99cfdacd34f33aa 345 Pfam PF03990 Domain of unknown function (DUF348) 98 132 6.9E-9 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Clos_2659 a29aed7f505f031ad99cfdacd34f33aa 345 Pfam PF03990 Domain of unknown function (DUF348) 38 78 1.5E-10 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Clos_2659 a29aed7f505f031ad99cfdacd34f33aa 345 Gene3D G3DSA:2.40.40.10 258 344 4.5E-8 T 11-10-2018 IPR036908 RlpA-like domain superfamily Clos_2659 a29aed7f505f031ad99cfdacd34f33aa 345 Pfam PF06725 3D domain 278 345 4.9E-23 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Clos_2659 a29aed7f505f031ad99cfdacd34f33aa 345 Gene3D G3DSA:2.20.230.10 149 225 3.5E-17 T 11-10-2018 Clos_2659 a29aed7f505f031ad99cfdacd34f33aa 345 SMART SM01208 148 226 6.8E-25 T 11-10-2018 IPR011098 G5 domain Clos_2084 33735e4daa918269e323e6e0ab7c36b3 223 Gene3D G3DSA:1.10.10.10 130 223 1.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2084 33735e4daa918269e323e6e0ab7c36b3 223 SUPERFAMILY SSF46894 125 221 3.4E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_2084 33735e4daa918269e323e6e0ab7c36b3 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 5.3E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_2084 33735e4daa918269e323e6e0ab7c36b3 223 SMART SM00862 147 222 5.3E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_2084 33735e4daa918269e323e6e0ab7c36b3 223 Gene3D G3DSA:3.40.50.2300 1 129 4.8E-30 T 11-10-2018 Clos_2084 33735e4daa918269e323e6e0ab7c36b3 223 SMART SM00448 2 112 2.4E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2084 33735e4daa918269e323e6e0ab7c36b3 223 SUPERFAMILY SSF52172 1 132 2.99E-34 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2084 33735e4daa918269e323e6e0ab7c36b3 223 Pfam PF00072 Response regulator receiver domain 4 112 1.8E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1813 5e7bccffb67cd3a5ea1502deb18550de 392 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 5 373 3.5E-119 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 Clos_1813 5e7bccffb67cd3a5ea1502deb18550de 392 Gene3D G3DSA:3.30.2130.30 1 175 1.4E-57 T 11-10-2018 Clos_1813 5e7bccffb67cd3a5ea1502deb18550de 392 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 176 371 5.7E-70 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 Clos_1813 5e7bccffb67cd3a5ea1502deb18550de 392 SUPERFAMILY SSF143437 3 174 2.09E-49 T 11-10-2018 Clos_1813 5e7bccffb67cd3a5ea1502deb18550de 392 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 392 151.044 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 Clos_1813 5e7bccffb67cd3a5ea1502deb18550de 392 SMART SM00981 73 166 8.5E-21 T 11-10-2018 IPR004114 THUMP domain GO:0003723 Clos_1813 5e7bccffb67cd3a5ea1502deb18550de 392 Pfam PF02926 THUMP domain 42 163 1.1E-16 T 11-10-2018 IPR004114 THUMP domain GO:0003723 Clos_1813 5e7bccffb67cd3a5ea1502deb18550de 392 Gene3D G3DSA:3.40.50.620 176 392 2.2E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_1813 5e7bccffb67cd3a5ea1502deb18550de 392 SUPERFAMILY SSF52402 175 379 1.04E-48 T 11-10-2018 Clos_1069 ba099c7212fd1718fcf52ba80060f8c9 342 Pfam PF04122 Putative cell wall binding repeat 2 118 204 9.0E-10 T 11-10-2018 IPR007253 Putative cell wall binding repeat 2 Clos_1069 ba099c7212fd1718fcf52ba80060f8c9 342 Pfam PF04122 Putative cell wall binding repeat 2 14 101 1.1E-6 T 11-10-2018 IPR007253 Putative cell wall binding repeat 2 Clos_1619 71c3289daa0184b2d8b0bf8618fd557e 128 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 28 127 3.8E-35 T 11-10-2018 IPR014211 Stage III sporulation protein AD Clos_1619 71c3289daa0184b2d8b0bf8618fd557e 128 Pfam PF06686 Stage III sporulation protein AC/AD protein family 3 57 1.8E-13 T 11-10-2018 IPR025664 Stage III sporulation protein AC/AD family Clos_1619 71c3289daa0184b2d8b0bf8618fd557e 128 Pfam PF06686 Stage III sporulation protein AC/AD protein family 71 124 4.3E-20 T 11-10-2018 IPR025664 Stage III sporulation protein AC/AD family Clos_0009 976fb991c803bd5f7025ecfe28e90b54 142 SUPERFAMILY SSF55874 36 134 2.46E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0009 976fb991c803bd5f7025ecfe28e90b54 142 Gene3D G3DSA:3.30.565.10 5 140 6.2E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0009 976fb991c803bd5f7025ecfe28e90b54 142 Pfam PF13581 Histidine kinase-like ATPase domain 13 136 1.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 Gene3D G3DSA:3.40.1380.20 335 468 4.2E-197 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 Gene3D G3DSA:3.20.20.60 2 334 4.2E-197 T 11-10-2018 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 PRINTS PR01050 Pyruvate kinase family signature 293 311 1.2E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 PRINTS PR01050 Pyruvate kinase family signature 243 267 1.2E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 PRINTS PR01050 Pyruvate kinase family signature 268 292 1.2E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 PRINTS PR01050 Pyruvate kinase family signature 312 328 1.2E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 PRINTS PR01050 Pyruvate kinase family signature 216 242 1.2E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.2E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.2E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 SUPERFAMILY SSF50800 71 166 7.15E-28 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 SUPERFAMILY SSF52009 465 582 1.09E-28 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 SUPERFAMILY SSF52935 322 473 2.09E-42 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 470 9.9E-36 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 Pfam PF00391 PEP-utilising enzyme, mobile domain 502 574 2.0E-20 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 1.1E-187 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 SUPERFAMILY SSF51621 1 341 4.89E-105 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 1.3E-152 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 ProSitePatterns PS00110 Pyruvate kinase active site signature. 214 226 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 Gene3D G3DSA:3.50.30.10 474 584 5.2E-31 T 11-10-2018 Clos_0586 e2c7e77b12503aa7eea9ae441f7bfd60 584 Gene3D G3DSA:2.40.33.10 70 167 4.2E-197 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Clos_0086 d527993f5daf108787c7f2ca1f3182c9 517 PIRSF PIRSF000858 1 517 2.4E-235 T 11-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 Clos_0086 d527993f5daf108787c7f2ca1f3182c9 517 SUPERFAMILY SSF100950 275 515 5.48E-79 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_0086 d527993f5daf108787c7f2ca1f3182c9 517 SMART SM00882 5 242 1.2E-76 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Clos_0086 d527993f5daf108787c7f2ca1f3182c9 517 SUPERFAMILY SSF100950 5 252 3.58E-91 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_0086 d527993f5daf108787c7f2ca1f3182c9 517 Gene3D G3DSA:3.40.1080.10 1 267 9.6E-109 T 11-10-2018 Clos_0086 d527993f5daf108787c7f2ca1f3182c9 517 Pfam PF01144 Coenzyme A transferase 6 241 8.7E-34 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Clos_0086 d527993f5daf108787c7f2ca1f3182c9 517 Gene3D G3DSA:3.40.1080.10 274 517 1.6E-112 T 11-10-2018 Clos_2463 12ecee7317adf3f10d8c69a4ab3b42a7 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 1.8E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2463 12ecee7317adf3f10d8c69a4ab3b42a7 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 1.8E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2463 12ecee7317adf3f10d8c69a4ab3b42a7 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 1.8E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2463 12ecee7317adf3f10d8c69a4ab3b42a7 146 SMART SM00347 27 127 2.2E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2463 12ecee7317adf3f10d8c69a4ab3b42a7 146 Gene3D G3DSA:1.10.10.10 4 142 4.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2463 12ecee7317adf3f10d8c69a4ab3b42a7 146 SUPERFAMILY SSF46785 31 137 1.24E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2463 12ecee7317adf3f10d8c69a4ab3b42a7 146 Pfam PF13463 Winged helix DNA-binding domain 37 100 8.4E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1568 bb84bedf12016094c8a20ce479fdcccb 291 Pfam PF01380 SIS domain 136 259 2.5E-23 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Clos_1568 bb84bedf12016094c8a20ce479fdcccb 291 Gene3D G3DSA:1.10.10.10 4 82 1.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1568 bb84bedf12016094c8a20ce479fdcccb 291 Gene3D G3DSA:3.40.50.10490 99 284 1.5E-37 T 11-10-2018 Clos_1568 bb84bedf12016094c8a20ce479fdcccb 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 78 1.1E-13 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Clos_1568 bb84bedf12016094c8a20ce479fdcccb 291 SUPERFAMILY SSF53697 102 281 8.7E-30 T 11-10-2018 Clos_1568 bb84bedf12016094c8a20ce479fdcccb 291 SUPERFAMILY SSF46689 7 83 3.4E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0163 1292efd1bdc6eac7090845ed3424f9cf 181 Gene3D G3DSA:1.10.10.10 113 179 3.1E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0163 1292efd1bdc6eac7090845ed3424f9cf 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 176 4.6E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_0163 1292efd1bdc6eac7090845ed3424f9cf 181 SUPERFAMILY SSF88659 117 178 7.1E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_0163 1292efd1bdc6eac7090845ed3424f9cf 181 Gene3D G3DSA:1.10.1740.10 1 111 1.2E-22 T 11-10-2018 Clos_0163 1292efd1bdc6eac7090845ed3424f9cf 181 SUPERFAMILY SSF88946 4 95 4.32E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0163 1292efd1bdc6eac7090845ed3424f9cf 181 Pfam PF04542 Sigma-70 region 2 23 90 1.5E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0163 1292efd1bdc6eac7090845ed3424f9cf 181 Pfam PF08281 Sigma-70, region 4 122 172 2.9E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_2716 703598b1af470dfe158bc29d1997db5e 199 Gene3D G3DSA:3.40.30.10 33 199 9.6E-42 T 11-10-2018 Clos_2716 703598b1af470dfe158bc29d1997db5e 199 SUPERFAMILY SSF52833 61 195 5.8E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_2716 703598b1af470dfe158bc29d1997db5e 199 Pfam PF00578 AhpC/TSA family 64 178 3.2E-27 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Clos_2025 7b7c4d325ae3db72fe786469da0992ef 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 64 2.0E-25 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Clos_2025 7b7c4d325ae3db72fe786469da0992ef 67 Gene3D G3DSA:1.10.8.910 5 67 6.7E-27 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily Clos_2025 7b7c4d325ae3db72fe786469da0992ef 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 43 57 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Clos_2025 7b7c4d325ae3db72fe786469da0992ef 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 20 29 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Clos_0384 6e3f3274af6f41bd28d6e0d3755addcb 284 Pfam PF17284 Spermidine synthase tetramerisation domain 3 55 9.2E-17 T 11-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Clos_0384 6e3f3274af6f41bd28d6e0d3755addcb 284 SUPERFAMILY SSF53335 3 280 8.96E-87 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0384 6e3f3274af6f41bd28d6e0d3755addcb 284 Pfam PF01564 Spermine/spermidine synthase domain 58 238 5.9E-58 T 11-10-2018 Clos_0384 6e3f3274af6f41bd28d6e0d3755addcb 284 TIGRFAM TIGR00417 speE: spermidine synthase 4 274 6.0E-97 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Clos_0384 6e3f3274af6f41bd28d6e0d3755addcb 284 Gene3D G3DSA:2.30.140.10 1 52 1.6E-20 T 11-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Clos_0384 6e3f3274af6f41bd28d6e0d3755addcb 284 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 280 40.93 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Clos_0384 6e3f3274af6f41bd28d6e0d3755addcb 284 Gene3D G3DSA:3.40.50.150 53 281 7.4E-78 T 11-10-2018 Clos_2159 4333e2598addc1e21816bceb6b6a3511 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2159 4333e2598addc1e21816bceb6b6a3511 326 Pfam PF00005 ABC transporter 24 181 6.1E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2159 4333e2598addc1e21816bceb6b6a3511 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 8.6E-28 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_2159 4333e2598addc1e21816bceb6b6a3511 326 Gene3D G3DSA:3.40.50.300 1 325 1.5E-99 T 11-10-2018 Clos_2159 4333e2598addc1e21816bceb6b6a3511 326 SMART SM00382 32 238 9.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2159 4333e2598addc1e21816bceb6b6a3511 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 5.0E-20 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_2159 4333e2598addc1e21816bceb6b6a3511 326 SUPERFAMILY SSF52540 3 252 1.82E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0573 9faec5b43ecb31c3ff52db192b102f91 322 Gene3D G3DSA:3.30.43.10 16 106 1.7E-28 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Clos_0573 9faec5b43ecb31c3ff52db192b102f91 322 SUPERFAMILY SSF56194 216 321 6.15E-38 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0573 9faec5b43ecb31c3ff52db192b102f91 322 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 221 319 8.1E-30 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0573 9faec5b43ecb31c3ff52db192b102f91 322 Gene3D G3DSA:3.30.465.10 110 236 6.5E-40 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Clos_0573 9faec5b43ecb31c3ff52db192b102f91 322 Gene3D G3DSA:3.90.78.10 237 322 4.7E-35 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0573 9faec5b43ecb31c3ff52db192b102f91 322 Pfam PF01565 FAD binding domain 56 183 2.2E-24 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Clos_0573 9faec5b43ecb31c3ff52db192b102f91 322 SUPERFAMILY SSF56176 25 214 1.31E-45 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Clos_0573 9faec5b43ecb31c3ff52db192b102f91 322 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 43 320 2.0E-74 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0573 9faec5b43ecb31c3ff52db192b102f91 322 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 322 90.816 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0885 217b0c713a3eb4ff3577bfe1fa625ea2 359 Gene3D G3DSA:3.90.1010.20 75 206 1.5E-13 T 11-10-2018 Clos_0885 217b0c713a3eb4ff3577bfe1fa625ea2 359 Gene3D G3DSA:3.90.1010.20 241 359 3.0E-9 T 11-10-2018 Clos_2820 808ec1e5735015f1dc8cdd070909bb4b 114 SMART SM00418 16 90 5.7E-29 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2820 808ec1e5735015f1dc8cdd070909bb4b 114 SUPERFAMILY SSF46785 10 95 2.62E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2820 808ec1e5735015f1dc8cdd070909bb4b 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 48 2.0E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2820 808ec1e5735015f1dc8cdd070909bb4b 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 2.0E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2820 808ec1e5735015f1dc8cdd070909bb4b 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 2.0E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2820 808ec1e5735015f1dc8cdd070909bb4b 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 2.0E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2820 808ec1e5735015f1dc8cdd070909bb4b 114 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 4.5E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2820 808ec1e5735015f1dc8cdd070909bb4b 114 Gene3D G3DSA:1.10.10.10 3 101 7.1E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2820 808ec1e5735015f1dc8cdd070909bb4b 114 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 39 57 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Clos_2004 14694478b570ff0f830898e18c40e5b0 87 Pfam PF03795 YCII-related domain 14 79 2.1E-9 T 11-10-2018 IPR005545 YCII-related Clos_2004 14694478b570ff0f830898e18c40e5b0 87 SUPERFAMILY SSF54909 2 83 8.58E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Clos_1178 f3df29e681d0eec1312de823e05a4288 210 SMART SM00267 1 162 1.1E-15 T 11-10-2018 IPR000160 GGDEF domain Clos_1178 f3df29e681d0eec1312de823e05a4288 210 SUPERFAMILY SSF55073 15 163 1.73E-31 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_1178 f3df29e681d0eec1312de823e05a4288 210 Gene3D G3DSA:3.30.70.270 6 168 3.4E-35 T 11-10-2018 Clos_1178 f3df29e681d0eec1312de823e05a4288 210 Pfam PF00990 Diguanylate cyclase, GGDEF domain 10 158 1.3E-29 T 11-10-2018 IPR000160 GGDEF domain Clos_1178 f3df29e681d0eec1312de823e05a4288 210 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 17 162 2.3E-33 T 11-10-2018 IPR000160 GGDEF domain Clos_2644 2db83fabf53b1b158c41df636a201876 185 SUPERFAMILY SSF53178 1 184 7.32E-65 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Clos_2644 2db83fabf53b1b158c41df636a201876 185 Pfam PF01195 Peptidyl-tRNA hydrolase 3 184 1.0E-59 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Clos_2644 2db83fabf53b1b158c41df636a201876 185 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Clos_2644 2db83fabf53b1b158c41df636a201876 185 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Clos_2644 2db83fabf53b1b158c41df636a201876 185 Gene3D G3DSA:3.40.50.1470 1 185 2.0E-71 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Clos_2644 2db83fabf53b1b158c41df636a201876 185 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 184 2.4E-62 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Clos_2644 2db83fabf53b1b158c41df636a201876 185 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 35.779 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Clos_2621 755c3ae8fb8a502f50912ea07b2e9c78 404 Gene3D G3DSA:1.20.1600.10 286 401 4.4E-17 T 11-10-2018 Clos_2621 755c3ae8fb8a502f50912ea07b2e9c78 404 Gene3D G3DSA:1.20.1600.10 22 285 7.0E-28 T 11-10-2018 Clos_2621 755c3ae8fb8a502f50912ea07b2e9c78 404 SUPERFAMILY SSF56954 52 400 7.19E-43 T 11-10-2018 Clos_2621 755c3ae8fb8a502f50912ea07b2e9c78 404 Pfam PF02321 Outer membrane efflux protein 293 399 2.3E-11 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Clos_2621 755c3ae8fb8a502f50912ea07b2e9c78 404 Pfam PF02321 Outer membrane efflux protein 136 231 1.2E-6 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Clos_1683 7f29c44aaa79a0ae2709a3ede8e6345b 317 Hamap MF_01818 Ribonuclease BN [rbn]. 2 313 31.771 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 Clos_1683 7f29c44aaa79a0ae2709a3ede8e6345b 317 Pfam PF00753 Metallo-beta-lactamase superfamily 21 88 1.4E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_1683 7f29c44aaa79a0ae2709a3ede8e6345b 317 SUPERFAMILY SSF56281 4 311 4.83E-63 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1683 7f29c44aaa79a0ae2709a3ede8e6345b 317 Gene3D G3DSA:3.60.15.10 2 313 3.0E-70 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1683 7f29c44aaa79a0ae2709a3ede8e6345b 317 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 311 7.9E-94 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 Clos_1683 7f29c44aaa79a0ae2709a3ede8e6345b 317 Pfam PF12706 Beta-lactamase superfamily domain 211 281 1.9E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 SUPERFAMILY SSF55973 243 393 1.1E-66 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 243 382 2.8E-67 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 SUPERFAMILY SSF55973 120 242 6.28E-53 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 Pfam PF02772 S-adenosylmethionine synthetase, central domain 125 241 3.3E-49 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.3E-44 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 PIRSF PIRSF000497 1 394 2.3E-173 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 Gene3D G3DSA:3.30.300.10 5 243 5.8E-177 T 11-10-2018 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 269 277 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 Gene3D G3DSA:3.30.300.10 102 385 5.8E-177 T 11-10-2018 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 SUPERFAMILY SSF55973 3 109 1.26E-47 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 Gene3D G3DSA:3.30.300.10 11 280 5.8E-177 T 11-10-2018 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 126 136 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 393 58.301 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_2531 828b7d358d8884cfefa775aafb4a264a 395 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 391 1.1E-182 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Clos_1399 217d859f240212c940a13a0f8b69f580 440 Gene3D G3DSA:3.40.50.300 1 164 2.4E-47 T 11-10-2018 Clos_1399 217d859f240212c940a13a0f8b69f580 440 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 433 1.1E-178 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Clos_1399 217d859f240212c940a13a0f8b69f580 440 Pfam PF01926 50S ribosome-binding GTPase 178 296 3.4E-27 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1399 217d859f240212c940a13a0f8b69f580 440 Pfam PF01926 50S ribosome-binding GTPase 6 121 1.8E-28 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1399 217d859f240212c940a13a0f8b69f580 440 PIRSF PIRSF006485 2 440 1.5E-177 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Clos_1399 217d859f240212c940a13a0f8b69f580 440 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 354 434 3.9E-34 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Clos_1399 217d859f240212c940a13a0f8b69f580 440 Gene3D G3DSA:3.30.300.20 354 437 3.1E-35 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Clos_1399 217d859f240212c940a13a0f8b69f580 440 Gene3D G3DSA:3.40.50.300 171 353 2.9E-56 T 11-10-2018 Clos_1399 217d859f240212c940a13a0f8b69f580 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 74 92 2.9E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1399 217d859f240212c940a13a0f8b69f580 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 2.9E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1399 217d859f240212c940a13a0f8b69f580 440 SUPERFAMILY SSF52540 6 166 2.48E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1399 217d859f240212c940a13a0f8b69f580 440 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 344 1.3E-28 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_1399 217d859f240212c940a13a0f8b69f580 440 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 160 2.3E-27 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_1399 217d859f240212c940a13a0f8b69f580 440 Hamap MF_00195 GTPase Der [der]. 3 437 41.399 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Clos_1399 217d859f240212c940a13a0f8b69f580 440 SUPERFAMILY SSF52540 139 437 4.75E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0231 92e0c042dc8015768cce6177c37fead9 556 Gene3D G3DSA:1.10.287.130 324 395 9.4E-20 T 11-10-2018 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 Pfam PF00512 His Kinase A (phospho-acceptor) domain 329 394 2.7E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 442 548 1.5E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0231 92e0c042dc8015768cce6177c37fead9 556 Pfam PF00672 HAMP domain 272 316 4.6E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 SMART SM00388 328 395 5.4E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 Gene3D G3DSA:1.20.1480.50 239 323 1.3E-8 T 11-10-2018 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 SUPERFAMILY SSF47384 311 394 5.69E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 Gene3D G3DSA:3.30.565.10 400 550 1.3E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0231 92e0c042dc8015768cce6177c37fead9 556 SUPERFAMILY SSF158472 274 318 4.05E-7 T 11-10-2018 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 SMART SM00304 268 320 1.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 SMART SM00387 441 550 5.2E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0231 92e0c042dc8015768cce6177c37fead9 556 SUPERFAMILY SSF55874 385 548 6.02E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0231 92e0c042dc8015768cce6177c37fead9 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 531 5.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 506 5.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0231 92e0c042dc8015768cce6177c37fead9 556 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 5.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1635 4a4d459527b65a3b55192cda802b3803 131 Gene3D G3DSA:3.30.700.10 14 127 3.4E-18 T 11-10-2018 Clos_1635 4a4d459527b65a3b55192cda802b3803 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 34 1.7E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_1635 4a4d459527b65a3b55192cda802b3803 131 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_1635 4a4d459527b65a3b55192cda802b3803 131 SUPERFAMILY SSF54523 14 71 5.57E-16 T 11-10-2018 Clos_1635 4a4d459527b65a3b55192cda802b3803 131 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 3.4E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Clos_1635 4a4d459527b65a3b55192cda802b3803 131 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 3.4E-10 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Clos_1635 4a4d459527b65a3b55192cda802b3803 131 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 33 1.9E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_2367 c850a3ebdbf2d8adef649218f7945dd6 450 Gene3D G3DSA:3.30.460.10 10 150 3.3E-47 T 11-10-2018 Clos_2367 c850a3ebdbf2d8adef649218f7945dd6 450 Gene3D G3DSA:1.10.3090.10 151 440 3.0E-67 T 11-10-2018 Clos_2367 c850a3ebdbf2d8adef649218f7945dd6 450 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 179 238 9.3E-20 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Clos_2367 c850a3ebdbf2d8adef649218f7945dd6 450 Pfam PF01743 Poly A polymerase head domain 30 150 5.7E-36 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Clos_2367 c850a3ebdbf2d8adef649218f7945dd6 450 SUPERFAMILY SSF81891 150 447 7.98E-61 T 11-10-2018 Clos_2367 c850a3ebdbf2d8adef649218f7945dd6 450 TIGRFAM TIGR00277 HDIG: HDIG domain 249 324 1.2E-7 T 11-10-2018 IPR006675 HDIG domain Clos_2367 c850a3ebdbf2d8adef649218f7945dd6 450 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 305 444 1.5E-10 T 11-10-2018 IPR032810 CCA-adding enzyme, C-terminal Clos_2367 c850a3ebdbf2d8adef649218f7945dd6 450 SUPERFAMILY SSF81301 11 148 8.83E-41 T 11-10-2018 Clos_1079 000e8935e66e67d66699c1374a508133 451 SUPERFAMILY SSF46689 355 448 5.38E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_1079 000e8935e66e67d66699c1374a508133 451 Pfam PF00072 Response regulator receiver domain 5 114 2.0E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1079 000e8935e66e67d66699c1374a508133 451 SMART SM00382 162 305 1.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1079 000e8935e66e67d66699c1374a508133 451 SUPERFAMILY SSF52172 3 186 1.17E-52 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1079 000e8935e66e67d66699c1374a508133 451 Pfam PF00158 Sigma-54 interaction domain 142 309 3.3E-74 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_1079 000e8935e66e67d66699c1374a508133 451 Gene3D G3DSA:1.10.8.60 313 388 1.3E-27 T 11-10-2018 Clos_1079 000e8935e66e67d66699c1374a508133 451 SMART SM00448 3 114 3.0E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1079 000e8935e66e67d66699c1374a508133 451 Gene3D G3DSA:1.10.10.60 389 448 1.2E-15 T 11-10-2018 Clos_1079 000e8935e66e67d66699c1374a508133 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 1.7E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_1079 000e8935e66e67d66699c1374a508133 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 449 1.7E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_1079 000e8935e66e67d66699c1374a508133 451 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_1079 000e8935e66e67d66699c1374a508133 451 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-43 T 11-10-2018 Clos_1079 000e8935e66e67d66699c1374a508133 451 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 1.5E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_1079 000e8935e66e67d66699c1374a508133 451 SUPERFAMILY SSF52540 142 384 7.58E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1079 000e8935e66e67d66699c1374a508133 451 Gene3D G3DSA:3.40.50.300 128 312 9.9E-69 T 11-10-2018 Clos_0403 ae354fc5dc3a5da3119452b66bf38446 186 SUPERFAMILY SSF101262 3 179 3.79E-36 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Clos_0403 ae354fc5dc3a5da3119452b66bf38446 186 Gene3D G3DSA:1.20.120.680 1 184 9.7E-41 T 11-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Clos_0403 ae354fc5dc3a5da3119452b66bf38446 186 Pfam PF04961 Formiminotransferase-cyclodeaminase 7 176 8.5E-39 T 11-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Clos_1612 5ded3081d3f503df231211cc113184a5 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 4.9E-12 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_1612 5ded3081d3f503df231211cc113184a5 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 102 121 4.9E-12 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_1612 5ded3081d3f503df231211cc113184a5 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 4.9E-12 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_1612 5ded3081d3f503df231211cc113184a5 328 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 163 184 4.9E-12 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_1612 5ded3081d3f503df231211cc113184a5 328 Gene3D G3DSA:3.30.420.40 130 296 1.1E-64 T 11-10-2018 Clos_1612 5ded3081d3f503df231211cc113184a5 328 SUPERFAMILY SSF53067 5 308 2.46E-22 T 11-10-2018 Clos_1612 5ded3081d3f503df231211cc113184a5 328 Gene3D G3DSA:3.30.420.40 7 312 1.1E-64 T 11-10-2018 Clos_1612 5ded3081d3f503df231211cc113184a5 328 Pfam PF00814 Glycoprotease family 106 308 4.6E-29 T 11-10-2018 IPR000905 Gcp-like domain Clos_1093 e619ced207d568aa1e9a210713a0ece2 185 Gene3D G3DSA:1.10.10.10 101 160 3.2E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1093 e619ced207d568aa1e9a210713a0ece2 185 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 9 179 3.3E-64 T 11-10-2018 IPR014304 RNA polymerase sigma-Z type Clos_1093 e619ced207d568aa1e9a210713a0ece2 185 Pfam PF08281 Sigma-70, region 4 103 154 6.3E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_1093 e619ced207d568aa1e9a210713a0ece2 185 SUPERFAMILY SSF88659 96 158 2.99E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1093 e619ced207d568aa1e9a210713a0ece2 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 158 1.4E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1093 e619ced207d568aa1e9a210713a0ece2 185 Gene3D G3DSA:1.10.1740.10 2 100 9.5E-17 T 11-10-2018 Clos_1093 e619ced207d568aa1e9a210713a0ece2 185 SUPERFAMILY SSF88946 9 86 1.73E-16 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1093 e619ced207d568aa1e9a210713a0ece2 185 Pfam PF04542 Sigma-70 region 2 15 75 5.2E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1152 6afec4606c9dac0fd5795b4ed206b402 322 SUPERFAMILY SSF56281 68 319 3.8E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1152 6afec4606c9dac0fd5795b4ed206b402 322 Pfam PF00753 Metallo-beta-lactamase superfamily 80 274 6.3E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_1152 6afec4606c9dac0fd5795b4ed206b402 322 Gene3D G3DSA:3.60.15.10 67 318 4.6E-70 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1152 6afec4606c9dac0fd5795b4ed206b402 322 SMART SM00849 79 275 6.4E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_0139 56843162ec7d03d1288471643a574565 406 SUPERFAMILY SSF52218 257 399 7.81E-29 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_0139 56843162ec7d03d1288471643a574565 406 PIRSF PIRSF005243 1 405 7.1E-108 T 11-10-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 Clos_0139 56843162ec7d03d1288471643a574565 406 SUPERFAMILY SSF56281 4 284 5.96E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_0139 56843162ec7d03d1288471643a574565 406 Gene3D G3DSA:3.40.50.360 258 396 2.4E-32 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_0139 56843162ec7d03d1288471643a574565 406 SMART SM00849 33 230 4.9E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_0139 56843162ec7d03d1288471643a574565 406 Gene3D G3DSA:3.60.15.10 1 257 9.5E-78 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_0139 56843162ec7d03d1288471643a574565 406 Pfam PF00753 Metallo-beta-lactamase superfamily 34 230 6.2E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_0824 b615bb29bec04fe54236aaee53955aad 460 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 1.3E-19 T 11-10-2018 Clos_0824 b615bb29bec04fe54236aaee53955aad 460 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.3E-19 T 11-10-2018 Clos_0824 b615bb29bec04fe54236aaee53955aad 460 PRINTS PR00173 Glutamate-aspartate symporter signature 260 279 1.3E-19 T 11-10-2018 Clos_0824 b615bb29bec04fe54236aaee53955aad 460 PRINTS PR00173 Glutamate-aspartate symporter signature 29 49 1.3E-19 T 11-10-2018 Clos_0824 b615bb29bec04fe54236aaee53955aad 460 PRINTS PR00173 Glutamate-aspartate symporter signature 106 131 1.3E-19 T 11-10-2018 Clos_0824 b615bb29bec04fe54236aaee53955aad 460 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.3E-19 T 11-10-2018 Clos_0824 b615bb29bec04fe54236aaee53955aad 460 PRINTS PR00173 Glutamate-aspartate symporter signature 77 97 1.3E-19 T 11-10-2018 Clos_0824 b615bb29bec04fe54236aaee53955aad 460 SUPERFAMILY SSF118215 31 442 1.7E-87 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Clos_0824 b615bb29bec04fe54236aaee53955aad 460 Pfam PF00375 Sodium:dicarboxylate symporter family 32 442 3.6E-99 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Clos_0824 b615bb29bec04fe54236aaee53955aad 460 Gene3D G3DSA:1.10.3860.10 6 459 3.2E-99 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Clos_1011 4f94b446923198011951bea0003a239e 242 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 25 240 29.235 T 11-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 Clos_1011 4f94b446923198011951bea0003a239e 242 Gene3D G3DSA:1.10.1760.20 25 235 1.2E-55 T 11-10-2018 Clos_1011 4f94b446923198011951bea0003a239e 242 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 25 235 4.6E-91 T 11-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 Clos_1011 4f94b446923198011951bea0003a239e 242 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 26 234 3.1E-51 T 11-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Clos_0169 c4bc1d13b98cb717c9bdef18f792eaea 264 SUPERFAMILY SSF52402 1 258 1.19E-81 T 11-10-2018 Clos_0169 c4bc1d13b98cb717c9bdef18f792eaea 264 SMART SM00893 22 215 7.7E-68 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0169 c4bc1d13b98cb717c9bdef18f792eaea 264 Gene3D G3DSA:3.40.50.620 1 264 1.7E-98 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0169 c4bc1d13b98cb717c9bdef18f792eaea 264 Pfam PF01012 Electron transfer flavoprotein domain 22 205 1.4E-52 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0169 c4bc1d13b98cb717c9bdef18f792eaea 264 PIRSF PIRSF000090 1 264 1.1E-92 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Clos_0714 de4b71f6c3acbe907e66ab9187eedc0f 132 SUPERFAMILY SSF52402 5 102 2.43E-6 T 11-10-2018 Clos_0714 de4b71f6c3acbe907e66ab9187eedc0f 132 Gene3D G3DSA:3.40.50.620 1 107 1.5E-5 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 Gene3D G3DSA:1.10.10.10 690 759 4.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 Gene3D G3DSA:3.40.50.300 410 687 5.1E-111 T 11-10-2018 Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 Gene3D G3DSA:3.30.980.40 305 408 6.4E-39 T 11-10-2018 Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 SMART SM00382 448 621 4.2E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 Pfam PF01580 FtsK/SpoIIIE family 550 600 3.6E-16 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 Pfam PF01580 FtsK/SpoIIIE family 413 549 1.4E-45 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 SUPERFAMILY SSF46785 698 763 8.1E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 SUPERFAMILY SSF52540 387 672 1.95E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 SMART SM00843 698 763 2.6E-38 T 11-10-2018 IPR018541 FtsK gamma domain Clos_1539 67e628f9466607ed5b1b99ccdc26d6ca 771 Pfam PF09397 Ftsk gamma domain 700 760 1.2E-30 T 11-10-2018 IPR018541 FtsK gamma domain Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 Pfam PF00009 Elongation factor Tu GTP binding domain 5 197 2.2E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 Gene3D G3DSA:3.40.50.300 3 199 1.7E-68 T 11-10-2018 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 137 7.2E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 Gene3D G3DSA:2.40.30.10 201 298 1.7E-26 T 11-10-2018 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 Gene3D G3DSA:3.30.70.870 306 588 8.4E-127 T 11-10-2018 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 Pfam PF03144 Elongation factor Tu domain 2 220 289 8.0E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 Gene3D G3DSA:2.40.50.250 481 597 8.4E-127 T 11-10-2018 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 SUPERFAMILY SSF50447 182 300 9.59E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 SUPERFAMILY SSF54980 397 511 3.79E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 Pfam PF00679 Elongation factor G C-terminus 395 479 1.7E-22 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 SMART SM00838 394 482 6.2E-4 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 SUPERFAMILY SSF54980 302 386 2.3E-12 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 SUPERFAMILY SSF52540 2 206 7.34E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 597 1.8E-280 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 PRINTS PR00315 GTP-binding elongation factor signature 8 21 3.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 PRINTS PR00315 GTP-binding elongation factor signature 72 82 3.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 PRINTS PR00315 GTP-binding elongation factor signature 124 133 3.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 PRINTS PR00315 GTP-binding elongation factor signature 52 60 3.7E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_1837 ca5927ca0d043e4900570f1bc5b64003 602 Gene3D G3DSA:3.30.70.240 388 480 8.4E-127 T 11-10-2018 Clos_2247 b0e2f8e4b040ecb9821d626a05082667 245 SMART SM00448 1 115 5.7E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2247 b0e2f8e4b040ecb9821d626a05082667 245 Pfam PF04397 LytTr DNA-binding domain 144 239 1.3E-18 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_2247 b0e2f8e4b040ecb9821d626a05082667 245 Gene3D G3DSA:3.40.50.2300 1 132 2.2E-26 T 11-10-2018 Clos_2247 b0e2f8e4b040ecb9821d626a05082667 245 Pfam PF00072 Response regulator receiver domain 3 115 2.5E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2247 b0e2f8e4b040ecb9821d626a05082667 245 SMART SM00850 142 241 1.2E-23 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_2247 b0e2f8e4b040ecb9821d626a05082667 245 Gene3D G3DSA:2.40.50.1020 133 235 4.4E-12 T 11-10-2018 Clos_2247 b0e2f8e4b040ecb9821d626a05082667 245 SUPERFAMILY SSF52172 2 132 8.82E-25 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1795 28b453843b92f4d4d1b91d0868c1f895 145 Gene3D G3DSA:3.30.565.10 3 141 1.4E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1795 28b453843b92f4d4d1b91d0868c1f895 145 SUPERFAMILY SSF55874 27 135 2.1E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1795 28b453843b92f4d4d1b91d0868c1f895 145 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 4 138 9.3E-65 T 11-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Clos_1795 28b453843b92f4d4d1b91d0868c1f895 145 SMART SM00387 37 141 2.8E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1795 28b453843b92f4d4d1b91d0868c1f895 145 Pfam PF13581 Histidine kinase-like ATPase domain 17 137 4.5E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1795 28b453843b92f4d4d1b91d0868c1f895 145 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 3 141 36.212 T 11-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Clos_0364 ae97a58f5049bf521de4d2ef0d5977b3 184 SUPERFAMILY SSF52507 2 184 1.57E-62 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Clos_0364 ae97a58f5049bf521de4d2ef0d5977b3 184 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 184 36.326 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Clos_0364 ae97a58f5049bf521de4d2ef0d5977b3 184 Pfam PF02441 Flavoprotein 2 163 4.6E-27 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Clos_0364 ae97a58f5049bf521de4d2ef0d5977b3 184 Gene3D G3DSA:3.40.50.1950 1 184 2.7E-80 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Clos_0364 ae97a58f5049bf521de4d2ef0d5977b3 184 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 182 4.9E-71 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 Gene3D G3DSA:3.20.20.70 1 321 2.9E-140 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 PIRSF PIRSF001415 1 323 8.2E-139 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 SUPERFAMILY SSF51569 2 321 6.01E-132 T 11-10-2018 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 119 133 2.5E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 239 255 2.5E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 187 206 2.5E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 264 279 2.5E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 149 168 2.5E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 294 313 2.5E-55 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 SMART SM01004 1 320 1.0E-207 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 239 251 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_1329 0f017032141fd846774ff2d2a3cecf14 326 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 318 4.3E-141 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 10 146 2.1E-43 T 11-10-2018 IPR023635 Peptide deformylase Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 PIRSF PIRSF004749 1 149 5.8E-44 T 11-10-2018 IPR023635 Peptide deformylase Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 Gene3D G3DSA:3.90.45.10 1 150 3.5E-50 T 11-10-2018 IPR036821 Peptide deformylase superfamily Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 Pfam PF01327 Polypeptide deformylase 4 146 1.5E-44 T 11-10-2018 IPR023635 Peptide deformylase Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 SUPERFAMILY SSF56420 3 147 9.68E-50 T 11-10-2018 IPR036821 Peptide deformylase superfamily Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 Hamap MF_00163 Peptide deformylase [def]. 2 149 25.911 T 11-10-2018 IPR023635 Peptide deformylase Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 PRINTS PR01576 Peptide deformylase signature 34 63 2.6E-26 T 11-10-2018 IPR023635 Peptide deformylase Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 PRINTS PR01576 Peptide deformylase signature 99 117 2.6E-26 T 11-10-2018 IPR023635 Peptide deformylase Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 PRINTS PR01576 Peptide deformylase signature 87 98 2.6E-26 T 11-10-2018 IPR023635 Peptide deformylase Clos_2348 5d974f213b7917aaa76e10b1bfa290c2 150 PRINTS PR01576 Peptide deformylase signature 118 147 2.6E-26 T 11-10-2018 IPR023635 Peptide deformylase Clos_1456 880075d55c068d54d293ef478fcbdda8 76 Pfam PF00550 Phosphopantetheine attachment site 4 72 4.9E-15 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain Clos_1456 880075d55c068d54d293ef478fcbdda8 76 Hamap MF_01217 Acyl carrier protein [acpP]. 1 76 19.861 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Clos_1456 880075d55c068d54d293ef478fcbdda8 76 Gene3D G3DSA:1.10.1200.10 1 76 1.2E-25 T 11-10-2018 IPR036736 ACP-like superfamily Clos_1456 880075d55c068d54d293ef478fcbdda8 76 SUPERFAMILY SSF47336 2 75 4.19E-21 T 11-10-2018 IPR036736 ACP-like superfamily Clos_1456 880075d55c068d54d293ef478fcbdda8 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 1.9E-26 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Clos_1456 880075d55c068d54d293ef478fcbdda8 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 75 1.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Clos_1483 00dda9c6b4f3d7a1494ec1906018674d 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 143 1.8E-19 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Clos_1483 00dda9c6b4f3d7a1494ec1906018674d 146 Pfam PF02050 Flagellar FliJ protein 20 142 7.7E-15 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Clos_1000 c46c6f06d5a7cc8e639013c99f61afd1 164 Gene3D G3DSA:3.40.630.30 3 163 3.5E-17 T 11-10-2018 Clos_1000 c46c6f06d5a7cc8e639013c99f61afd1 164 Pfam PF13302 Acetyltransferase (GNAT) domain 23 139 9.0E-8 T 11-10-2018 IPR000182 GNAT domain Clos_1000 c46c6f06d5a7cc8e639013c99f61afd1 164 SUPERFAMILY SSF55729 2 147 1.54E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0519 ffd67ece976c9aa9865a55da9b96d40f 133 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 133 33.466 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Clos_0519 ffd67ece976c9aa9865a55da9b96d40f 133 SUPERFAMILY SSF53137 18 133 2.83E-49 T 11-10-2018 Clos_0519 ffd67ece976c9aa9865a55da9b96d40f 133 PIRSF PIRSF002131 1 133 1.3E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Clos_0519 ffd67ece976c9aa9865a55da9b96d40f 133 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 130 1.2E-58 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0519 ffd67ece976c9aa9865a55da9b96d40f 133 Pfam PF00411 Ribosomal protein S11 23 132 4.4E-49 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Clos_0519 ffd67ece976c9aa9865a55da9b96d40f 133 Gene3D G3DSA:3.30.420.80 5 133 2.3E-53 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0519 ffd67ece976c9aa9865a55da9b96d40f 133 ProSitePatterns PS00054 Ribosomal protein S11 signature. 101 123 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site Clos_1118 d5ea6b05ab84fffd12c3fc691f8468be 299 SUPERFAMILY SSF161098 30 290 4.67E-39 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1118 d5ea6b05ab84fffd12c3fc691f8468be 299 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 27 295 3.7E-83 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Clos_1118 d5ea6b05ab84fffd12c3fc691f8468be 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 294 2.3E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_1118 d5ea6b05ab84fffd12c3fc691f8468be 299 Gene3D G3DSA:1.10.3720.10 70 298 7.8E-31 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 SMART SM00900 48 122 4.4E-9 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 521 543 1.5E-10 T 11-10-2018 Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 317 335 1.5E-10 T 11-10-2018 Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 169 1.5E-10 T 11-10-2018 Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 Gene3D G3DSA:3.50.50.60 150 563 1.4E-97 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 Gene3D G3DSA:3.90.700.10 373 513 1.4E-97 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 SUPERFAMILY SSF51905 143 569 2.94E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 Pfam PF00890 FAD binding domain 150 547 2.2E-47 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 SUPERFAMILY SSF56425 389 517 1.64E-27 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 553 568 8.0E-7 T 11-10-2018 Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 171 8.0E-7 T 11-10-2018 Clos_2710 c58b49a25a16f8de393eccc4d726187d 571 Pfam PF04205 FMN-binding domain 48 119 3.9E-8 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0973 a0018954a34fa47187d2753160580170 428 PRINTS PR00148 Enolase signature 365 382 9.0E-47 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 PRINTS PR00148 Enolase signature 37 51 9.0E-47 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 PRINTS PR00148 Enolase signature 313 324 9.0E-47 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 PRINTS PR00148 Enolase signature 336 350 9.0E-47 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 PRINTS PR00148 Enolase signature 161 174 9.0E-47 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 PRINTS PR00148 Enolase signature 107 123 9.0E-47 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 SMART SM01193 4 134 1.6E-99 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 6.2E-134 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 PIRSF PIRSF001400 1 427 9.1E-196 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 SMART SM01192 139 427 3.7E-222 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 SUPERFAMILY SSF51604 138 427 3.28E-131 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Clos_0973 a0018954a34fa47187d2753160580170 428 SUPERFAMILY SSF54826 3 138 3.83E-60 T 11-10-2018 Clos_0973 a0018954a34fa47187d2753160580170 428 Gene3D G3DSA:3.30.390.10 1 127 2.7E-58 T 11-10-2018 IPR029017 Enolase-like, N-terminal Clos_0973 a0018954a34fa47187d2753160580170 428 Pfam PF03952 Enolase, N-terminal domain 4 134 2.4E-62 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 4.6E-217 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0973 a0018954a34fa47187d2753160580170 428 Gene3D G3DSA:3.20.20.120 128 428 5.6E-140 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Clos_0973 a0018954a34fa47187d2753160580170 428 ProSitePatterns PS00164 Enolase signature. 336 349 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0973 a0018954a34fa47187d2753160580170 428 Hamap MF_00318 Enolase [eno]. 2 413 46.536 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_2026 9dc0a2978f67ac05669de9bb54797914 175 Gene3D G3DSA:1.10.10.10 14 108 6.1E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2026 9dc0a2978f67ac05669de9bb54797914 175 Pfam PF14277 Domain of unknown function (DUF4364) 12 173 2.3E-52 T 11-10-2018 IPR025374 Protein of unknown function DUF4364 Clos_1583 f83f1b7d14e32b2c75dcc8e79cfe24c9 208 Pfam PF11167 Protein of unknown function (DUF2953) 126 179 4.2E-16 T 11-10-2018 IPR021338 Protein of unknown function DUF2953 Clos_1363 ea34a59b901d8cef4f1c3bfcfd555da2 190 SUPERFAMILY SSF52218 1 189 7.61E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_1363 ea34a59b901d8cef4f1c3bfcfd555da2 190 Gene3D G3DSA:3.40.50.360 1 188 3.1E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_1363 ea34a59b901d8cef4f1c3bfcfd555da2 190 Pfam PF03358 NADPH-dependent FMN reductase 1 138 1.1E-26 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Clos_0927 47a3560434e1438614cbe4aeefbddb10 362 SMART SM00922 141 239 3.7E-27 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Clos_0927 47a3560434e1438614cbe4aeefbddb10 362 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 6 124 1.3E-21 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Clos_0927 47a3560434e1438614cbe4aeefbddb10 362 Gene3D G3DSA:3.30.390.10 6 115 3.0E-117 T 11-10-2018 IPR029017 Enolase-like, N-terminal Clos_0927 47a3560434e1438614cbe4aeefbddb10 362 Pfam PF13378 Enolase C-terminal domain-like 151 353 1.5E-46 T 11-10-2018 IPR029065 Enolase C-terminal domain-like Clos_0927 47a3560434e1438614cbe4aeefbddb10 362 SUPERFAMILY SSF51604 112 354 6.55E-68 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Clos_0927 47a3560434e1438614cbe4aeefbddb10 362 Gene3D G3DSA:3.20.20.120 116 352 3.0E-117 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Clos_0927 47a3560434e1438614cbe4aeefbddb10 362 SUPERFAMILY SSF54826 1 125 4.08E-33 T 11-10-2018 Clos_0850 7f78dff60ba3d334e40ab3056d3d11c6 362 Pfam PF01757 Acyltransferase family 15 334 3.7E-30 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Clos_0652 a3fd296fbd93d7d51d4591089a45d937 305 SUPERFAMILY SSF110581 4 302 6.02E-119 T 11-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Clos_0652 a3fd296fbd93d7d51d4591089a45d937 305 Gene3D G3DSA:3.40.1790.10 2 305 2.3E-141 T 11-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Clos_0652 a3fd296fbd93d7d51d4591089a45d937 305 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 10 303 44.776 T 11-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Clos_0652 a3fd296fbd93d7d51d4591089a45d937 305 Pfam PF04227 Indigoidine synthase A like protein 11 300 9.3E-137 T 11-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 Clos_2058 56ea9980189e392aa587d8b16f76905f 154 SUPERFAMILY SSF50475 1 153 1.96E-48 T 11-10-2018 Clos_2058 56ea9980189e392aa587d8b16f76905f 154 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 14 151 5.5E-22 T 11-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Clos_2058 56ea9980189e392aa587d8b16f76905f 154 Gene3D G3DSA:2.30.110.10 2 153 1.5E-42 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Clos_1135 ada44a0965d1cc95c4cd1d8b3e71c796 263 ProSitePatterns PS01228 Hypothetical cof family signature 1. 9 20 - T 11-10-2018 Clos_1135 ada44a0965d1cc95c4cd1d8b3e71c796 263 SUPERFAMILY SSF56784 8 260 3.91E-67 T 11-10-2018 IPR036412 HAD-like superfamily Clos_1135 ada44a0965d1cc95c4cd1d8b3e71c796 263 Pfam PF13344 Haloacid dehalogenase-like hydrolase 10 109 2.9E-29 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Clos_1135 ada44a0965d1cc95c4cd1d8b3e71c796 263 PIRSF PIRSF000915 2 263 3.2E-69 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Clos_1135 ada44a0965d1cc95c4cd1d8b3e71c796 263 Gene3D G3DSA:3.40.50.1000 10 253 1.3E-85 T 11-10-2018 IPR023214 HAD superfamily Clos_1135 ada44a0965d1cc95c4cd1d8b3e71c796 263 Pfam PF13242 HAD-hyrolase-like 185 258 1.4E-20 T 11-10-2018 Clos_1135 ada44a0965d1cc95c4cd1d8b3e71c796 263 Gene3D G3DSA:3.40.50.1000 75 187 1.3E-85 T 11-10-2018 IPR023214 HAD superfamily Clos_1135 ada44a0965d1cc95c4cd1d8b3e71c796 263 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 10 235 2.4E-48 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Clos_1021 1bde848ddc6332e06a9a687b015d2cbc 240 SUPERFAMILY SSF53790 1 237 1.31E-55 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Clos_1021 1bde848ddc6332e06a9a687b015d2cbc 240 Gene3D G3DSA:3.30.950.10 109 239 8.9E-51 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Clos_1021 1bde848ddc6332e06a9a687b015d2cbc 240 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 204 1.6E-39 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Clos_1021 1bde848ddc6332e06a9a687b015d2cbc 240 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 4 237 1.3E-93 T 11-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 Clos_1021 1bde848ddc6332e06a9a687b015d2cbc 240 Gene3D G3DSA:3.40.1010.10 1 108 2.6E-31 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Clos_2697 84721ee917471cfe0f7d53ea7ea510ca 228 Gene3D G3DSA:3.30.470.20 99 223 2.5E-32 T 11-10-2018 Clos_2697 84721ee917471cfe0f7d53ea7ea510ca 228 SUPERFAMILY SSF56104 1 219 2.62E-50 T 11-10-2018 Clos_2697 84721ee917471cfe0f7d53ea7ea510ca 228 Pfam PF01259 SAICAR synthetase 3 216 9.7E-31 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Clos_2697 84721ee917471cfe0f7d53ea7ea510ca 228 Gene3D G3DSA:3.30.200.20 1 98 6.3E-24 T 11-10-2018 Clos_2697 84721ee917471cfe0f7d53ea7ea510ca 228 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 1 228 18.75 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Clos_0228 efc16bbeb963668e88f5e4e727b43664 249 SUPERFAMILY SSF54534 115 201 7.85E-33 T 11-10-2018 Clos_0228 efc16bbeb963668e88f5e4e727b43664 249 Gene3D G3DSA:1.10.4030.30 74 217 6.2E-37 T 11-10-2018 Clos_0228 efc16bbeb963668e88f5e4e727b43664 249 SUPERFAMILY SSF109998 4 143 2.67E-20 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Clos_0228 efc16bbeb963668e88f5e4e727b43664 249 Pfam PF13616 PPIC-type PPIASE domain 112 204 6.3E-25 T 11-10-2018 Clos_0228 efc16bbeb963668e88f5e4e727b43664 249 Gene3D G3DSA:3.10.50.40 115 205 6.2E-37 T 11-10-2018 Clos_0228 efc16bbeb963668e88f5e4e727b43664 249 Gene3D G3DSA:1.10.8.1040 5 65 7.4E-10 T 11-10-2018 Clos_0228 efc16bbeb963668e88f5e4e727b43664 249 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 143 163 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Clos_2738 124904fc84f0fe7a26f7276c6e020247 349 Gene3D G3DSA:3.60.15.10 74 347 2.1E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_2738 124904fc84f0fe7a26f7276c6e020247 349 PIRSF PIRSF038896 2 341 3.1E-89 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 Clos_2738 124904fc84f0fe7a26f7276c6e020247 349 SUPERFAMILY SSF56281 87 336 2.03E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_2738 124904fc84f0fe7a26f7276c6e020247 349 Pfam PF12706 Beta-lactamase superfamily domain 105 299 3.5E-37 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_1638 22edcc93f5399f227475d7108d77a038 560 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 147 6.5E-23 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal Clos_1638 22edcc93f5399f227475d7108d77a038 560 Pfam PF00437 Type II/IV secretion system protein 186 450 7.3E-85 T 11-10-2018 IPR001482 Type II/IV secretion system protein Clos_1638 22edcc93f5399f227475d7108d77a038 560 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 379 393 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Clos_1638 22edcc93f5399f227475d7108d77a038 560 SMART SM00382 312 433 7.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1638 22edcc93f5399f227475d7108d77a038 560 Gene3D G3DSA:3.30.450.90 148 284 1.7E-48 T 11-10-2018 Clos_1638 22edcc93f5399f227475d7108d77a038 560 SUPERFAMILY SSF52540 175 555 2.7E-100 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1638 22edcc93f5399f227475d7108d77a038 560 Gene3D G3DSA:3.40.50.300 286 558 2.4E-109 T 11-10-2018 Clos_1638 22edcc93f5399f227475d7108d77a038 560 SUPERFAMILY SSF160246 4 142 1.96E-38 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Clos_1638 22edcc93f5399f227475d7108d77a038 560 Gene3D G3DSA:3.30.300.160 62 143 2.8E-11 T 11-10-2018 Clos_1563 fb264d4d8121bc797b148c82ea8c3a72 202 SUPERFAMILY SSF69593 3 199 8.89E-55 T 11-10-2018 Clos_1563 fb264d4d8121bc797b148c82ea8c3a72 202 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 21 144 1.2E-32 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 Clos_1563 fb264d4d8121bc797b148c82ea8c3a72 202 SMART SM00563 35 147 1.0E-35 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Clos_1563 fb264d4d8121bc797b148c82ea8c3a72 202 Pfam PF01553 Acyltransferase 20 144 6.7E-27 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Clos_2818 d386a7dcb68222f27fcf0a9db2e0de23 334 SUPERFAMILY SSF103473 52 328 2.01E-5 T 11-10-2018 IPR036259 MFS transporter superfamily Clos_2818 d386a7dcb68222f27fcf0a9db2e0de23 334 Pfam PF03773 Predicted permease 39 327 3.9E-66 T 11-10-2018 IPR005524 Predicted permease DUF318 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 PRINTS PR01874 DNA repair protein radA signature 121 138 3.5E-91 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 PRINTS PR01874 DNA repair protein radA signature 79 107 3.5E-91 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 PRINTS PR01874 DNA repair protein radA signature 245 271 3.5E-91 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 PRINTS PR01874 DNA repair protein radA signature 171 195 3.5E-91 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 PRINTS PR01874 DNA repair protein radA signature 210 238 3.5E-91 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 PRINTS PR01874 DNA repair protein radA signature 319 342 3.5E-91 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 PRINTS PR01874 DNA repair protein radA signature 10 34 3.5E-91 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 SUPERFAMILY SSF54211 252 453 3.22E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 SMART SM00382 87 241 4.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 449 1.1E-182 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 SUPERFAMILY SSF52540 66 283 1.05E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 Pfam PF13481 AAA domain 63 219 7.3E-17 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 Gene3D G3DSA:3.40.50.300 63 283 9.2E-41 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 Pfam PF13541 Subunit ChlI of Mg-chelatase 342 428 7.5E-14 T 11-10-2018 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 Hamap MF_01498 DNA repair protein RadA [radA]. 21 453 42.765 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Clos_0457 a41e3875bb0e90db5bd8889d8e1b7a50 456 Gene3D G3DSA:3.30.230.10 327 454 3.8E-18 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_0627 b186a0c72a4715d1b7a10e9d7c4af4e5 398 Pfam PF01734 Patatin-like phospholipase 4 189 4.9E-25 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Clos_0627 b186a0c72a4715d1b7a10e9d7c4af4e5 398 Gene3D G3DSA:3.40.1090.10 1 86 2.2E-24 T 11-10-2018 Clos_0627 b186a0c72a4715d1b7a10e9d7c4af4e5 398 SUPERFAMILY SSF52151 2 286 1.05E-45 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Clos_0296 a3a49227792eeab350e8c590472c59b6 179 Pfam PF00578 AhpC/TSA family 6 140 3.9E-41 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Clos_0296 a3a49227792eeab350e8c590472c59b6 179 SUPERFAMILY SSF52833 5 178 5.83E-60 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0296 a3a49227792eeab350e8c590472c59b6 179 PIRSF PIRSF000239 1 179 2.3E-60 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Clos_0296 a3a49227792eeab350e8c590472c59b6 179 Gene3D G3DSA:3.40.30.10 1 179 1.6E-72 T 11-10-2018 Clos_0942 23d6d1a731368d9e01a666c735ca2b58 150 SUPERFAMILY SSF46934 1 47 1.22E-8 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 Clos_0942 23d6d1a731368d9e01a666c735ca2b58 150 Pfam PF14242 Domain of unknown function (DUF4342) 45 119 4.9E-18 T 11-10-2018 IPR025642 Domain of unknown function DUF4342 Clos_0034 552a5316aaef522fe4443da857039620 295 Pfam PF01925 Sulfite exporter TauE/SafE 2 145 5.3E-13 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Clos_0034 552a5316aaef522fe4443da857039620 295 Pfam PF01925 Sulfite exporter TauE/SafE 170 285 1.3E-8 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Clos_0959 4c05cd6c096673ac3135d5c110cf0624 513 SUPERFAMILY SSF53901 185 292 1.68E-13 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0959 4c05cd6c096673ac3135d5c110cf0624 513 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 255 333 5.5E-8 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Clos_0959 4c05cd6c096673ac3135d5c110cf0624 513 Gene3D G3DSA:3.40.47.10 185 412 1.5E-9 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_0959 4c05cd6c096673ac3135d5c110cf0624 513 PIRSF PIRSF037559 1 513 1.2E-279 T 11-10-2018 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta Clos_1192 08c7cb87767849614a4d9063f97cabde 151 Pfam PF01584 CheW-like domain 5 141 6.4E-37 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Clos_1192 08c7cb87767849614a4d9063f97cabde 151 Gene3D G3DSA:2.30.30.40 7 132 6.8E-43 T 11-10-2018 Clos_1192 08c7cb87767849614a4d9063f97cabde 151 SUPERFAMILY SSF50341 4 142 1.83E-38 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Clos_1192 08c7cb87767849614a4d9063f97cabde 151 SMART SM00260 1 138 2.3E-40 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Clos_1192 08c7cb87767849614a4d9063f97cabde 151 Gene3D G3DSA:2.40.50.180 24 133 6.8E-43 T 11-10-2018 Clos_2510 226307177cd00e2c0e664fc9b3ba802f 338 Gene3D G3DSA:3.90.1210.10 281 338 5.2E-21 T 11-10-2018 Clos_2510 226307177cd00e2c0e664fc9b3ba802f 338 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 5 332 3.9E-155 T 11-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 Clos_2510 226307177cd00e2c0e664fc9b3ba802f 338 SMART SM00858 280 338 1.2E-6 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Clos_2510 226307177cd00e2c0e664fc9b3ba802f 338 SUPERFAMILY SSF51269 275 338 6.54E-19 T 11-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 Clos_2510 226307177cd00e2c0e664fc9b3ba802f 338 SUPERFAMILY SSF51569 3 292 5.62E-92 T 11-10-2018 Clos_2510 226307177cd00e2c0e664fc9b3ba802f 338 Gene3D G3DSA:3.20.20.70 2 265 2.6E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2510 226307177cd00e2c0e664fc9b3ba802f 338 Pfam PF03102 NeuB family 27 265 3.2E-97 T 11-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 Clos_2510 226307177cd00e2c0e664fc9b3ba802f 338 Pfam PF08666 SAF domain 282 338 4.0E-9 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Clos_0532 ae198c9c6b7c2ba77b6077c7ea526d89 277 SUPERFAMILY SSF52540 26 256 1.98E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0532 ae198c9c6b7c2ba77b6077c7ea526d89 277 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 33 273 7.3E-94 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Clos_0532 ae198c9c6b7c2ba77b6077c7ea526d89 277 Hamap MF_02040 Iron-sulfur cluster carrier protein. 28 271 35.386 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Clos_0532 ae198c9c6b7c2ba77b6077c7ea526d89 277 Gene3D G3DSA:3.40.50.300 25 276 4.2E-79 T 11-10-2018 Clos_0532 ae198c9c6b7c2ba77b6077c7ea526d89 277 ProSitePatterns PS01215 Mrp family signature. 140 156 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 SUPERFAMILY SSF53623 109 321 1.16E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 SUPERFAMILY SSF53244 323 460 6.28E-36 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 461 32.816 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 Gene3D G3DSA:3.90.190.20 322 464 1.2E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 Pfam PF01225 Mur ligase family, catalytic domain 26 100 2.3E-10 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 399 1.3E-13 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 Pfam PF08245 Mur ligase middle domain 114 300 9.9E-45 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 Gene3D G3DSA:3.40.1190.10 90 320 1.1E-66 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 460 1.1E-131 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 Gene3D G3DSA:3.40.1390.10 1 80 1.3E-21 T 11-10-2018 Clos_1375 b691aa5110e19d186cdc69d60fb8d973 464 SUPERFAMILY SSF63418 1 105 2.09E-22 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Clos_1991 1650e04db2badb3ecf86a15fceb26cb6 162 SUPERFAMILY SSF55729 1 148 2.27E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1991 1650e04db2badb3ecf86a15fceb26cb6 162 Pfam PF00583 Acetyltransferase (GNAT) family 25 141 1.0E-12 T 11-10-2018 IPR000182 GNAT domain Clos_1991 1650e04db2badb3ecf86a15fceb26cb6 162 Gene3D G3DSA:3.40.630.30 1 162 3.6E-28 T 11-10-2018 Clos_0660 af7f50783a6906f1b4089c4b95e88f8f 224 SUPERFAMILY SSF52540 2 202 3.67E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0660 af7f50783a6906f1b4089c4b95e88f8f 224 Pfam PF00005 ABC transporter 18 165 2.3E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0660 af7f50783a6906f1b4089c4b95e88f8f 224 Gene3D G3DSA:3.40.50.300 1 221 3.5E-60 T 11-10-2018 Clos_0660 af7f50783a6906f1b4089c4b95e88f8f 224 SMART SM00382 27 222 6.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0825 bf15228811c33f31bd54982671254f9b 341 SUPERFAMILY SSF53686 11 315 1.96E-84 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clos_0825 bf15228811c33f31bd54982671254f9b 341 Gene3D G3DSA:3.40.50.1100 16 311 3.0E-95 T 11-10-2018 Clos_0825 bf15228811c33f31bd54982671254f9b 341 Gene3D G3DSA:3.40.50.1100 51 153 3.0E-95 T 11-10-2018 Clos_0825 bf15228811c33f31bd54982671254f9b 341 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 304 5.4E-65 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Clos_1521 fde36b3c81ecf8fc927486877be4473b 348 Pfam PF04551 GcpE protein 5 346 5.5E-144 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Clos_1521 fde36b3c81ecf8fc927486877be4473b 348 SUPERFAMILY SSF51717 32 222 3.14E-12 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_1521 fde36b3c81ecf8fc927486877be4473b 348 Gene3D G3DSA:3.20.20.20 1 254 8.8E-110 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_1521 fde36b3c81ecf8fc927486877be4473b 348 PIRSF PIRSF004640 1 348 1.0E-151 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Clos_1521 fde36b3c81ecf8fc927486877be4473b 348 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2 345 1.3E-132 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Clos_1521 fde36b3c81ecf8fc927486877be4473b 348 Gene3D G3DSA:3.30.413.10 255 348 2.2E-38 T 11-10-2018 Clos_1521 fde36b3c81ecf8fc927486877be4473b 348 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 347 33.248 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Clos_1521 fde36b3c81ecf8fc927486877be4473b 348 SUPERFAMILY SSF56014 258 345 1.96E-14 T 11-10-2018 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 Gene3D G3DSA:2.40.30.20 1 93 1.2E-38 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 2.4E-18 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 SUPERFAMILY SSF50615 10 94 7.46E-31 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 PIRSF PIRSF039088 1 503 9.1E-269 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 Gene3D G3DSA:1.20.150.20 372 502 4.6E-55 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 Gene3D G3DSA:3.40.50.300 94 371 1.5E-130 T 11-10-2018 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 501 9.5E-261 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 496 2.6E-51 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 SUPERFAMILY SSF47917 372 500 1.6E-48 T 11-10-2018 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 501 52.657 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 SUPERFAMILY SSF52540 96 370 1.45E-103 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2562 ec3976bccac90a7ad29eb9a904dd9555 505 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 3.3E-75 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2083 7ec50602bb00c8afc73b22be987dcef0 332 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 222 324 1.4E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2083 7ec50602bb00c8afc73b22be987dcef0 332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 254 268 5.8E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2083 7ec50602bb00c8afc73b22be987dcef0 332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 306 5.8E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2083 7ec50602bb00c8afc73b22be987dcef0 332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 325 5.8E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_2083 7ec50602bb00c8afc73b22be987dcef0 332 SMART SM00387 221 328 1.5E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2083 7ec50602bb00c8afc73b22be987dcef0 332 SUPERFAMILY SSF55874 180 324 7.07E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2083 7ec50602bb00c8afc73b22be987dcef0 332 Gene3D G3DSA:3.30.565.10 153 323 1.5E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 SMART SM01231 308 368 4.6E-17 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 510 3.5E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 3.5E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 534 3.5E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 553 3.5E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 SMART SM00387 413 556 1.3E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 SUPERFAMILY SSF47226 2 126 1.1E-32 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 SMART SM00073 3 100 4.8E-32 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 SUPERFAMILY SSF55052 172 254 2.88E-21 T 11-10-2018 IPR035891 CheY-binding domain of CheA Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Gene3D G3DSA:3.30.70.1110 171 255 3.8E-25 T 11-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Pfam PF07194 P2 response regulator binding domain 177 253 5.8E-23 T 11-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Gene3D G3DSA:3.30.565.10 369 555 9.9E-59 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Pfam PF01627 Hpt domain 5 97 3.2E-19 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 555 2.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 SUPERFAMILY SSF50341 555 691 3.92E-33 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 309 368 1.6E-16 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Gene3D G3DSA:1.10.287.560 308 368 3.9E-20 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Gene3D G3DSA:1.20.120.160 1 141 5.2E-41 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 SMART SM00260 548 692 5.4E-41 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 SUPERFAMILY SSF47384 309 369 1.77E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 SUPERFAMILY SSF55874 370 554 9.69E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Gene3D G3DSA:2.30.30.40 556 687 5.2E-43 T 11-10-2018 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Gene3D G3DSA:2.40.50.180 579 647 5.2E-43 T 11-10-2018 Clos_1506 e6c1b47a4090ea9e108be44ad3176549 692 Pfam PF01584 CheW-like domain 560 690 4.4E-26 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Clos_1366 d31616ad6f68c86ca142ef562b2192fb 420 Gene3D G3DSA:3.30.830.10 238 420 4.6E-42 T 11-10-2018 Clos_1366 d31616ad6f68c86ca142ef562b2192fb 420 SUPERFAMILY SSF63411 250 412 6.0E-29 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_1366 d31616ad6f68c86ca142ef562b2192fb 420 Pfam PF05193 Peptidase M16 inactive domain 184 356 2.3E-18 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Clos_1366 d31616ad6f68c86ca142ef562b2192fb 420 Gene3D G3DSA:3.30.830.10 4 222 3.6E-59 T 11-10-2018 Clos_1366 d31616ad6f68c86ca142ef562b2192fb 420 SUPERFAMILY SSF63411 8 222 6.6E-19 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_0938 7b015f2ebac06fc79fb4d447d1135eb3 271 ProDom PD313455 YFJL PSPB19' PRECURSOR TRANSPORTER SIGNAL 9 125 3.0E-11 T 11-10-2018 IPR020523 Uncharacterised protein family, YfjL Clos_0123 176a2e2da9f9199d5477e860e4062297 250 Pfam PF12679 ABC-2 family transporter protein 52 246 2.3E-7 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Clos_1707 ed8e94642aa82716776624c35a66c3ab 249 SUPERFAMILY SSF69572 6 248 1.96E-61 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Clos_1707 ed8e94642aa82716776624c35a66c3ab 249 Pfam PF00899 ThiF family 9 245 3.2E-38 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Clos_1707 ed8e94642aa82716776624c35a66c3ab 249 Gene3D G3DSA:3.40.50.720 2 249 1.0E-83 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Clos_0006 9e90b74345464e045c44084173e33c80 636 SUPERFAMILY SSF56719 398 627 1.83E-90 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Clos_0006 9e90b74345464e045c44084173e33c80 636 Gene3D G3DSA:3.40.50.670 403 636 2.1E-109 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Clos_0006 9e90b74345464e045c44084173e33c80 636 Pfam PF00204 DNA gyrase B 225 394 9.2E-66 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Clos_0006 9e90b74345464e045c44084173e33c80 636 Gene3D G3DSA:3.30.230.10 224 402 4.4E-76 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 198 211 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 224 246 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 589 601 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 364 378 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 474 483 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 316 332 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 9 19 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 378 398 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 183 198 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR01159 DNA gyrase subunit B signature 605 621 1.2E-75 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 9 636 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 6 636 95.424 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 SUPERFAMILY SSF55874 8 217 7.86E-74 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0006 9e90b74345464e045c44084173e33c80 636 SMART SM00387 34 178 2.7E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0006 9e90b74345464e045c44084173e33c80 636 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 177 2.2E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0006 9e90b74345464e045c44084173e33c80 636 SUPERFAMILY SSF54211 225 395 4.36E-63 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_0006 9e90b74345464e045c44084173e33c80 636 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 564 625 2.4E-32 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Clos_0006 9e90b74345464e045c44084173e33c80 636 Gene3D G3DSA:3.30.565.10 5 223 5.9E-90 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0006 9e90b74345464e045c44084173e33c80 636 SMART SM00433 38 629 0.0 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR00418 DNA topoisomerase II family signature 568 584 2.1E-72 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR00418 DNA topoisomerase II family signature 508 525 2.1E-72 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR00418 DNA topoisomerase II family signature 490 506 2.1E-72 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR00418 DNA topoisomerase II family signature 528 540 2.1E-72 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR00418 DNA topoisomerase II family signature 272 285 2.1E-72 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR00418 DNA topoisomerase II family signature 73 86 2.1E-72 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR00418 DNA topoisomerase II family signature 38 53 2.1E-72 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR00418 DNA topoisomerase II family signature 116 130 2.1E-72 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 PRINTS PR00418 DNA topoisomerase II family signature 424 438 2.1E-72 T 11-10-2018 Clos_0006 9e90b74345464e045c44084173e33c80 636 Pfam PF01751 Toprim domain 423 533 1.4E-18 T 11-10-2018 IPR006171 TOPRIM domain Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 SUPERFAMILY SSF52540 155 397 1.31E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 SMART SM00382 175 319 3.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 63 3.6E-9 T 11-10-2018 IPR000014 PAS domain Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 368 377 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 464 2.7E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 2.7E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 Pfam PF00158 Sigma-54 interaction domain 156 323 8.7E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 SMART SM00091 10 77 4.3E-5 T 11-10-2018 IPR000014 PAS domain Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 242 257 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 Gene3D G3DSA:3.40.50.300 140 327 2.8E-62 T 11-10-2018 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 Gene3D G3DSA:1.10.10.60 412 468 5.0E-15 T 11-10-2018 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 Pfam PF00989 PAS fold 13 81 4.1E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 SUPERFAMILY SSF46689 368 463 7.17E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 Gene3D G3DSA:1.10.8.60 328 408 5.7E-22 T 11-10-2018 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 SUPERFAMILY SSF55785 7 112 1.74E-11 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 Pfam PF02954 Bacterial regulatory protein, Fis family 425 461 4.3E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0171 e8a4aeeb2051eaa5148595841aa882e3 469 Gene3D G3DSA:3.30.450.20 13 120 9.4E-12 T 11-10-2018 Clos_0675 7f1784dfe6e1b439171c49c6a92d8475 171 Gene3D G3DSA:3.40.30.10 3 169 7.7E-46 T 11-10-2018 Clos_0675 7f1784dfe6e1b439171c49c6a92d8475 171 Hamap MF_00269 Thiol peroxidase [tpx]. 8 168 35.455 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 Clos_0675 7f1784dfe6e1b439171c49c6a92d8475 171 Pfam PF08534 Redoxin 24 164 1.4E-21 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Clos_0675 7f1784dfe6e1b439171c49c6a92d8475 171 SUPERFAMILY SSF52833 8 165 8.54E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0675 7f1784dfe6e1b439171c49c6a92d8475 171 ProSitePatterns PS01265 Tpx family signature. 88 99 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 Clos_1575 fcb6a8de94649d876c8cee27f8e0de34 189 Pfam PF06962 Putative rRNA methylase 49 186 2.8E-50 T 11-10-2018 IPR010719 Putative rRNA methylase Clos_1575 fcb6a8de94649d876c8cee27f8e0de34 189 Gene3D G3DSA:3.40.50.150 3 188 1.5E-65 T 11-10-2018 Clos_1575 fcb6a8de94649d876c8cee27f8e0de34 189 SUPERFAMILY SSF53335 12 170 1.17E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0509 e4a077de937f3bd8c59f4bff113fc119 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Clos_0509 e4a077de937f3bd8c59f4bff113fc119 168 Gene3D G3DSA:3.30.230.10 76 168 6.5E-33 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_0509 e4a077de937f3bd8c59f4bff113fc119 168 SUPERFAMILY SSF54211 82 161 3.03E-24 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_0509 e4a077de937f3bd8c59f4bff113fc119 168 SUPERFAMILY SSF54768 10 78 2.41E-23 T 11-10-2018 Clos_0509 e4a077de937f3bd8c59f4bff113fc119 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 34.089 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Clos_0509 e4a077de937f3bd8c59f4bff113fc119 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 159 1.5E-28 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Clos_0509 e4a077de937f3bd8c59f4bff113fc119 168 Gene3D G3DSA:3.30.160.20 3 75 2.1E-32 T 11-10-2018 Clos_0509 e4a077de937f3bd8c59f4bff113fc119 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 77 1.2E-30 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Clos_0509 e4a077de937f3bd8c59f4bff113fc119 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 165 1.9E-65 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Clos_0336 46535bfa473d1e590c855b413b12578e 279 Pfam PF04536 TPM domain 34 156 9.5E-31 T 11-10-2018 IPR007621 TPM domain Clos_0336 46535bfa473d1e590c855b413b12578e 279 Gene3D G3DSA:3.10.310.50 19 166 4.8E-23 T 11-10-2018 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 36 256 3.1E-83 T 11-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 SUPERFAMILY SSF88659 176 257 5.05E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 257 3.9E-148 T 11-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 Pfam PF04545 Sigma-70, region 4 206 255 2.1E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 Pfam PF04542 Sigma-70 region 2 42 111 7.7E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 227 253 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 Gene3D G3DSA:1.10.10.10 110 164 5.6E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 PIRSF PIRSF000770 114 157 6.2 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 PIRSF PIRSF000770 161 257 7.9E-14 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 PIRSF PIRSF000770 11 147 5.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 PRINTS PR00046 Major sigma-70 factor signature 242 253 1.5E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 PRINTS PR00046 Major sigma-70 factor signature 210 222 1.5E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 PRINTS PR00046 Major sigma-70 factor signature 227 242 1.5E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 PRINTS PR00046 Major sigma-70 factor signature 90 98 1.5E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 PRINTS PR00046 Major sigma-70 factor signature 66 79 1.5E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 Gene3D G3DSA:1.10.10.10 188 257 1.9E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 Gene3D G3DSA:1.20.120.1810 4 109 1.8E-27 T 11-10-2018 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 Pfam PF04539 Sigma-70 region 3 122 176 9.4E-8 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 SUPERFAMILY SSF88946 5 110 3.4E-34 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 256 4.4E-37 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1388 d0acfcc1b364e5af1cb20efb43529abb 257 SUPERFAMILY SSF88659 114 189 6.1E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_0045 b8a34e55a248034b73eb757380a25914 191 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 178 4.9E-47 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Clos_0045 b8a34e55a248034b73eb757380a25914 191 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 94 9.0E-24 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Clos_0045 b8a34e55a248034b73eb757380a25914 191 Gene3D G3DSA:2.170.120.20 96 188 7.3E-22 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal Clos_0045 b8a34e55a248034b73eb757380a25914 191 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 182 26.347 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Clos_0045 b8a34e55a248034b73eb757380a25914 191 Gene3D G3DSA:2.40.240.10 3 94 9.3E-26 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_0045 b8a34e55a248034b73eb757380a25914 191 SUPERFAMILY SSF50715 9 180 4.01E-51 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_0045 b8a34e55a248034b73eb757380a25914 191 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 179 1.3E-21 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain Clos_0045 b8a34e55a248034b73eb757380a25914 191 Pfam PF01386 Ribosomal L25p family 8 91 4.2E-24 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Clos_0940 9f739a220f6372aa557809eff00c885f 162 Pfam PF08281 Sigma-70, region 4 102 143 2.8E-7 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_0940 9f739a220f6372aa557809eff00c885f 162 Pfam PF04542 Sigma-70 region 2 7 70 7.2E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0940 9f739a220f6372aa557809eff00c885f 162 Gene3D G3DSA:1.10.10.10 85 159 7.9E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0940 9f739a220f6372aa557809eff00c885f 162 SUPERFAMILY SSF88659 76 156 9.91E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_0940 9f739a220f6372aa557809eff00c885f 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 156 1.6E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_0940 9f739a220f6372aa557809eff00c885f 162 SUPERFAMILY SSF88946 5 90 2.51E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0940 9f739a220f6372aa557809eff00c885f 162 Gene3D G3DSA:1.10.1740.10 2 70 8.6E-23 T 11-10-2018 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 Pfam PF02954 Bacterial regulatory protein, Fis family 452 490 1.2E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 SUPERFAMILY SSF52540 179 426 2.32E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 Gene3D G3DSA:3.40.50.300 165 351 4.3E-63 T 11-10-2018 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 Gene3D G3DSA:1.10.8.60 352 420 9.0E-20 T 11-10-2018 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 SUPERFAMILY SSF46689 444 493 3.33E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 SMART SM00091 37 104 0.0021 T 11-10-2018 IPR000014 PAS domain Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 Gene3D G3DSA:3.30.450.20 35 140 8.4E-10 T 11-10-2018 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 204 217 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 SMART SM00382 200 345 3.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 267 282 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 Gene3D G3DSA:1.10.10.60 432 493 1.5E-12 T 11-10-2018 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 396 405 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 Pfam PF08448 PAS fold 48 138 5.0E-7 T 11-10-2018 IPR013656 PAS fold-4 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 Pfam PF00158 Sigma-54 interaction domain 180 347 1.3E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_2445 2765f643cfbcfbafcb6312f6ed529d2a 494 SUPERFAMILY SSF55785 48 133 1.34E-10 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0062 4ec8a5b25fd4168d51b6766b9a5818e9 329 Pfam PF13177 DNA polymerase III, delta subunit 8 165 5.9E-56 T 11-10-2018 Clos_0062 4ec8a5b25fd4168d51b6766b9a5818e9 329 Gene3D G3DSA:3.40.50.300 1 163 6.0E-60 T 11-10-2018 Clos_0062 4ec8a5b25fd4168d51b6766b9a5818e9 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 15 198 8.2E-59 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Clos_0062 4ec8a5b25fd4168d51b6766b9a5818e9 329 SUPERFAMILY SSF52540 4 203 2.25E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1335 06f7d69114f62960c4a48f07428af025 246 Pfam PF04397 LytTr DNA-binding domain 147 244 1.0E-30 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_1335 06f7d69114f62960c4a48f07428af025 246 Gene3D G3DSA:3.40.50.2300 1 131 3.6E-29 T 11-10-2018 Clos_1335 06f7d69114f62960c4a48f07428af025 246 Gene3D G3DSA:2.40.50.40 139 207 4.6E-18 T 11-10-2018 Clos_1335 06f7d69114f62960c4a48f07428af025 246 SMART SM00850 147 245 1.6E-37 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_1335 06f7d69114f62960c4a48f07428af025 246 SMART SM00448 3 114 3.6E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1335 06f7d69114f62960c4a48f07428af025 246 SUPERFAMILY SSF52172 3 159 7.4E-28 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1335 06f7d69114f62960c4a48f07428af025 246 Pfam PF00072 Response regulator receiver domain 6 113 8.0E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 PRINTS PR01469 Bacterial carbamate kinase signature 210 225 4.7E-60 T 11-10-2018 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 PRINTS PR01469 Bacterial carbamate kinase signature 157 176 4.7E-60 T 11-10-2018 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 4.7E-60 T 11-10-2018 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 4.7E-60 T 11-10-2018 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 PRINTS PR01469 Bacterial carbamate kinase signature 265 280 4.7E-60 T 11-10-2018 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 4.7E-60 T 11-10-2018 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 PRINTS PR01469 Bacterial carbamate kinase signature 180 198 4.7E-60 T 11-10-2018 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 Gene3D G3DSA:3.40.1160.10 1 311 6.3E-116 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 TIGRFAM TIGR00746 arcC: carbamate kinase 3 310 6.6E-110 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 PIRSF PIRSF000723 1 311 3.2E-121 T 11-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 Pfam PF00696 Amino acid kinase family 3 291 6.6E-32 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Clos_2181 c789ae70b4331a9e13965f1d5af17a34 313 SUPERFAMILY SSF53633 3 309 1.44E-80 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Clos_0077 425079ef85b12571ed2c81d71ccd5860 200 SUPERFAMILY SSF141571 20 199 7.85E-40 T 11-10-2018 Clos_0077 425079ef85b12571ed2c81d71ccd5860 200 Pfam PF13599 Pentapeptide repeats (9 copies) 40 106 3.0E-12 T 11-10-2018 IPR001646 Pentapeptide repeat Clos_0077 425079ef85b12571ed2c81d71ccd5860 200 Pfam PF00805 Pentapeptide repeats (8 copies) 119 151 3.1E-6 T 11-10-2018 IPR001646 Pentapeptide repeat Clos_0077 425079ef85b12571ed2c81d71ccd5860 200 Gene3D G3DSA:2.160.20.100 2 200 1.4E-42 T 11-10-2018 Clos_0701 036b4678b255e8d258deca1c5690ee2c 201 Gene3D G3DSA:2.60.60.30 19 198 1.5E-63 T 11-10-2018 Clos_0701 036b4678b255e8d258deca1c5690ee2c 201 Pfam PF02342 TerD domain 1 201 5.0E-76 T 11-10-2018 IPR003325 TerD domain Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 SUPERFAMILY SSF54849 137 205 7.1E-26 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 Gene3D G3DSA:1.10.560.10 7 520 6.2E-232 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 Gene3D G3DSA:3.50.7.10 190 370 6.2E-232 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 1.0E-101 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 Hamap MF_00600 60 kDa chaperonin [groL]. 1 538 41.74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 7.5E-255 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 PRINTS PR00298 60kDa chaperonin signature 348 373 7.7E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 PRINTS PR00298 60kDa chaperonin signature 26 52 7.7E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 PRINTS PR00298 60kDa chaperonin signature 266 289 7.7E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 PRINTS PR00298 60kDa chaperonin signature 82 109 7.7E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 PRINTS PR00298 60kDa chaperonin signature 396 417 7.7E-72 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 SUPERFAMILY SSF48592 9 520 1.75E-80 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 Gene3D G3DSA:3.30.260.10 135 408 6.2E-232 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Clos_2447 3bb07d89b0a308e44f8fd4c28e1e2feb 541 SUPERFAMILY SSF52029 183 374 1.42E-84 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 6 355 1.2E-174 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 Gene3D G3DSA:3.30.420.40 6 357 7.2E-162 T 11-10-2018 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 181 198 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 SUPERFAMILY SSF53067 5 174 2.75E-74 T 11-10-2018 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 Gene3D G3DSA:3.30.420.40 139 334 7.2E-162 T 11-10-2018 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 PIRSF PIRSF036458 3 358 2.9E-173 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 Hamap MF_00542 Probable butyrate kinase [buk]. 1 358 176.487 T 11-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 PRINTS PR00471 Acetate kinase family signature 276 289 5.2E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 PRINTS PR00471 Acetate kinase family signature 181 202 5.2E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 PRINTS PR00471 Acetate kinase family signature 7 18 5.2E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 PRINTS PR00471 Acetate kinase family signature 299 315 5.2E-17 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 Pfam PF00871 Acetokinase family 7 353 2.7E-80 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_2413 c941ee9504a2d123ee08b1a915b02d3e 358 SUPERFAMILY SSF53067 119 350 9.47E-57 T 11-10-2018 Clos_0516 d936ae0d82deebfbd982aac13640a31c 72 Gene3D G3DSA:2.40.50.140 2 71 1.7E-36 T 11-10-2018 Clos_0516 d936ae0d82deebfbd982aac13640a31c 72 SUPERFAMILY SSF50249 1 70 1.36E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0516 d936ae0d82deebfbd982aac13640a31c 72 SMART SM00316 4 72 1.3E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_0516 d936ae0d82deebfbd982aac13640a31c 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 9.3E-36 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Clos_0516 d936ae0d82deebfbd982aac13640a31c 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.781 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Clos_0516 d936ae0d82deebfbd982aac13640a31c 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.6E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Clos_1270 1b2c000ff304e99fb6f1b61ca00a150c 102 Pfam PF03551 Transcriptional regulator PadR-like family 18 88 1.8E-20 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal Clos_1270 1b2c000ff304e99fb6f1b61ca00a150c 102 SUPERFAMILY SSF46785 3 100 2.51E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1270 1b2c000ff304e99fb6f1b61ca00a150c 102 Gene3D G3DSA:1.10.10.10 2 102 5.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1262 558def65977650f949572f387002269c 205 SUPERFAMILY SSF46689 8 76 1.3E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_1262 558def65977650f949572f387002269c 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 6.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_1262 558def65977650f949572f387002269c 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 6.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_1262 558def65977650f949572f387002269c 205 Gene3D G3DSA:1.10.357.10 56 202 8.6E-26 T 11-10-2018 Clos_1262 558def65977650f949572f387002269c 205 SUPERFAMILY SSF48498 116 202 2.05E-13 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Clos_1262 558def65977650f949572f387002269c 205 Gene3D G3DSA:1.10.10.60 1 54 4.6E-21 T 11-10-2018 Clos_1262 558def65977650f949572f387002269c 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 57 3.1E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0822 d0afda3ccca65d7fc8c7ba8c81c4b455 274 Gene3D G3DSA:3.20.80.10 194 272 2.9E-6 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_0822 d0afda3ccca65d7fc8c7ba8c81c4b455 274 SUPERFAMILY SSF46955 9 122 1.58E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_0822 d0afda3ccca65d7fc8c7ba8c81c4b455 274 Pfam PF13411 MerR HTH family regulatory protein 10 77 9.9E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0822 d0afda3ccca65d7fc8c7ba8c81c4b455 274 SUPERFAMILY SSF55136 139 270 3.66E-13 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_0822 d0afda3ccca65d7fc8c7ba8c81c4b455 274 Gene3D G3DSA:1.10.1660.10 7 138 4.2E-27 T 11-10-2018 Clos_0822 d0afda3ccca65d7fc8c7ba8c81c4b455 274 SMART SM00422 9 78 8.0E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2595 ac6097bf65614126b9d2096e5c2a7ead 322 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 319 2.9E-129 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Clos_2595 ac6097bf65614126b9d2096e5c2a7ead 322 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 312 4.8E-142 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Clos_2595 ac6097bf65614126b9d2096e5c2a7ead 322 Gene3D G3DSA:3.40.190.90 123 286 3.7E-134 T 11-10-2018 Clos_2595 ac6097bf65614126b9d2096e5c2a7ead 322 Gene3D G3DSA:3.30.540.10 5 312 3.7E-134 T 11-10-2018 Clos_2595 ac6097bf65614126b9d2096e5c2a7ead 322 SUPERFAMILY SSF56655 1 315 5.13E-108 T 11-10-2018 Clos_2595 ac6097bf65614126b9d2096e5c2a7ead 322 PIRSF PIRSF004532 1 322 1.1E-142 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Clos_1407 c96b748d0ee13dc90e73a6b98ed1b9fd 234 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 7 228 29.335 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Clos_1407 c96b748d0ee13dc90e73a6b98ed1b9fd 234 SUPERFAMILY SSF51419 4 227 1.96E-74 T 11-10-2018 IPR029066 PLP-binding barrel Clos_1407 c96b748d0ee13dc90e73a6b98ed1b9fd 234 Gene3D G3DSA:3.20.20.10 2 234 1.5E-83 T 11-10-2018 IPR029066 PLP-binding barrel Clos_1407 c96b748d0ee13dc90e73a6b98ed1b9fd 234 Pfam PF01168 Alanine racemase, N-terminal domain 26 229 5.9E-23 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_1407 c96b748d0ee13dc90e73a6b98ed1b9fd 234 PIRSF PIRSF004848 2 234 1.0E-77 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Clos_1407 c96b748d0ee13dc90e73a6b98ed1b9fd 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 5 229 2.6E-56 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Clos_2127 f99010cb79c6c21a3f3cee8787aa7b65 556 SUPERFAMILY SSF52540 4 554 3.19E-257 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2127 f99010cb79c6c21a3f3cee8787aa7b65 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Clos_2127 f99010cb79c6c21a3f3cee8787aa7b65 556 Gene3D G3DSA:3.40.50.300 6 438 3.8E-215 T 11-10-2018 Clos_2127 f99010cb79c6c21a3f3cee8787aa7b65 556 Gene3D G3DSA:3.10.410.10 443 532 1.7E-37 T 11-10-2018 Clos_2127 f99010cb79c6c21a3f3cee8787aa7b65 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 50.613 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Clos_2127 f99010cb79c6c21a3f3cee8787aa7b65 556 Pfam PF01268 Formate--tetrahydrofolate ligase 2 556 2.1E-279 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Clos_2127 f99010cb79c6c21a3f3cee8787aa7b65 556 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Clos_2127 f99010cb79c6c21a3f3cee8787aa7b65 556 Gene3D G3DSA:3.30.1510.10 129 247 3.8E-215 T 11-10-2018 Clos_1973 f5758cf307f6fc3dfaae7dda819072f0 278 SUPERFAMILY SSF55315 5 106 8.59E-21 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Clos_1973 f5758cf307f6fc3dfaae7dda819072f0 278 SUPERFAMILY SSF75217 118 267 2.09E-40 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Clos_1973 f5758cf307f6fc3dfaae7dda819072f0 278 Gene3D G3DSA:3.40.1280.10 117 275 8.0E-53 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clos_1973 f5758cf307f6fc3dfaae7dda819072f0 278 Gene3D G3DSA:3.30.1330.30 5 107 2.3E-24 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Clos_1973 f5758cf307f6fc3dfaae7dda819072f0 278 Pfam PF00588 SpoU rRNA Methylase family 123 261 2.4E-36 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Clos_1973 f5758cf307f6fc3dfaae7dda819072f0 278 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 34 107 2.1E-10 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Clos_1973 f5758cf307f6fc3dfaae7dda819072f0 278 SMART SM00967 33 109 7.0E-10 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 TIGRFAM TIGR00615 recR: recombination protein RecR 4 197 4.5E-87 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 108.871 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 SUPERFAMILY SSF111304 4 199 8.24E-78 T 11-10-2018 IPR023627 Recombination protein RecR Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 Gene3D G3DSA:3.30.60.80 55 77 5.7E-9 T 11-10-2018 Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 Gene3D G3DSA:1.10.8.420 1 54 1.1E-22 T 11-10-2018 Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 SMART SM00493 81 166 6.6E-17 T 11-10-2018 IPR006171 TOPRIM domain Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 Gene3D G3DSA:3.40.1360.10 78 199 1.2E-48 T 11-10-2018 Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 SMART SM00278 13 32 0.0068 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 Pfam PF13662 Toprim domain 83 172 1.4E-26 T 11-10-2018 IPR006171 TOPRIM domain Clos_2854 cfd1d1c034e3ebf3734b6da5b0b0bbfa 199 Pfam PF02132 RecR protein 40 79 6.1E-18 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Clos_0407 0f423782890bcd7eb24f4777b0bf1a36 341 ProSitePatterns PS00770 Aminotransferases class-IV signature. 221 250 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Clos_0407 0f423782890bcd7eb24f4777b0bf1a36 341 PIRSF PIRSF006468 1 341 4.8E-120 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 Clos_0407 0f423782890bcd7eb24f4777b0bf1a36 341 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 32 340 6.1E-142 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 Clos_0407 0f423782890bcd7eb24f4777b0bf1a36 341 Gene3D G3DSA:3.30.470.10 1 161 7.1E-59 T 11-10-2018 Clos_0407 0f423782890bcd7eb24f4777b0bf1a36 341 SUPERFAMILY SSF56752 4 337 2.75E-104 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Clos_0407 0f423782890bcd7eb24f4777b0bf1a36 341 Pfam PF01063 Amino-transferase class IV 57 294 5.1E-38 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Clos_0407 0f423782890bcd7eb24f4777b0bf1a36 341 Gene3D G3DSA:3.20.10.10 163 341 1.7E-56 T 11-10-2018 Clos_1001 af2e03c02052bd5d4f611d3c6559bf97 672 Pfam PF09334 tRNA synthetases class I (M) 26 259 1.8E-44 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1001 af2e03c02052bd5d4f611d3c6559bf97 672 Pfam PF09334 tRNA synthetases class I (M) 322 477 3.7E-17 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1001 af2e03c02052bd5d4f611d3c6559bf97 672 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 32 43 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1001 af2e03c02052bd5d4f611d3c6559bf97 672 SUPERFAMILY SSF47323 506 640 2.18E-12 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1001 af2e03c02052bd5d4f611d3c6559bf97 672 SUPERFAMILY SSF52374 23 485 4.5E-41 T 11-10-2018 Clos_1001 af2e03c02052bd5d4f611d3c6559bf97 672 Gene3D G3DSA:2.170.220.10 131 258 3.2E-44 T 11-10-2018 Clos_1001 af2e03c02052bd5d4f611d3c6559bf97 672 Gene3D G3DSA:3.40.50.620 311 491 9.6E-20 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_1001 af2e03c02052bd5d4f611d3c6559bf97 672 Gene3D G3DSA:1.10.730.10 504 655 2.0E-8 T 11-10-2018 Clos_1001 af2e03c02052bd5d4f611d3c6559bf97 672 Gene3D G3DSA:3.40.50.620 27 126 3.2E-44 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 SUPERFAMILY SSF53323 7 218 2.75E-28 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 209 450 2.2E-59 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 174 5.2E-29 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 Gene3D G3DSA:3.40.920.10 1 184 2.9E-21 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 SUPERFAMILY SSF52922 473 571 1.22E-11 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 5 570 1.1E-180 T 11-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 SUPERFAMILY SSF52518 196 456 3.04E-70 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 Gene3D G3DSA:3.40.50.920 471 572 2.5E-18 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 Gene3D G3DSA:3.40.50.970 185 385 5.6E-72 T 11-10-2018 Clos_2124 22bf706b8c3c3027c3107964e828cb64 574 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 477 565 2.8E-6 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Clos_0493 cccc478978eb2a726688cd8eab0ca2c1 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 3.3E-84 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0493 cccc478978eb2a726688cd8eab0ca2c1 207 SUPERFAMILY SSF52166 1 206 8.9E-86 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0493 cccc478978eb2a726688cd8eab0ca2c1 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 2.9E-75 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Clos_0493 cccc478978eb2a726688cd8eab0ca2c1 207 Gene3D G3DSA:3.40.1370.10 3 207 9.2E-86 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0493 cccc478978eb2a726688cd8eab0ca2c1 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 37.458 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1016 790815d389957a8cc3151ceeb4d549ed 357 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 20 354 2.1E-66 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Clos_1016 790815d389957a8cc3151ceeb4d549ed 357 Gene3D G3DSA:3.30.2110.10 15 182 2.3E-48 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Clos_1016 790815d389957a8cc3151ceeb4d549ed 357 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 13 347 26.439 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Clos_1016 790815d389957a8cc3151ceeb4d549ed 357 SUPERFAMILY SSF111342 3 284 4.84E-78 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Clos_1016 790815d389957a8cc3151ceeb4d549ed 357 Pfam PF01888 CbiD 13 266 3.9E-87 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Clos_1016 790815d389957a8cc3151ceeb4d549ed 357 PIRSF PIRSF026782 9 356 1.7E-116 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Clos_1273 dafd4994c08d9d4bf6e8f614268cc887 157 Pfam PF11188 Protein of unknown function (DUF2975) 42 157 1.1E-33 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 PIRSF PIRSF000850 270 365 0.0027 T 11-10-2018 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 PIRSF PIRSF000850 361 463 0.048 T 11-10-2018 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 PIRSF PIRSF000850 81 164 0.29 T 11-10-2018 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 Gene3D G3DSA:3.30.870.10 94 291 1.3E-44 T 11-10-2018 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 Pfam PF13091 PLD-like domain 117 260 2.3E-14 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 Pfam PF13091 PLD-like domain 306 429 7.8E-25 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 SMART SM00155 377 404 4.8E-7 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 SMART SM00155 200 227 3.2E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 SUPERFAMILY SSF56024 252 449 2.36E-37 T 11-10-2018 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 Gene3D G3DSA:3.30.870.10 297 440 1.3E-24 T 11-10-2018 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 98 463 1.6E-110 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Clos_2153 44f6839b35a70c761dbc640bdbb7a885 464 SUPERFAMILY SSF56024 95 292 3.45E-46 T 11-10-2018 Clos_0533 e2a6957527357de4ed35485e71357821 485 Gene3D G3DSA:3.20.20.70 1 483 2.3E-225 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0533 e2a6957527357de4ed35485e71357821 485 PIRSF PIRSF000130 1 485 4.0E-215 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Clos_0533 e2a6957527357de4ed35485e71357821 485 SUPERFAMILY SSF51412 5 474 5.49E-129 T 11-10-2018 Clos_0533 e2a6957527357de4ed35485e71357821 485 SMART SM00116 157 205 3.9E-8 T 11-10-2018 IPR000644 CBS domain Clos_0533 e2a6957527357de4ed35485e71357821 485 SMART SM00116 97 144 2.2E-6 T 11-10-2018 IPR000644 CBS domain Clos_0533 e2a6957527357de4ed35485e71357821 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 9 483 87.63 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Clos_0533 e2a6957527357de4ed35485e71357821 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 470 3.4E-168 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Clos_0533 e2a6957527357de4ed35485e71357821 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Clos_0533 e2a6957527357de4ed35485e71357821 485 SMART SM01240 8 470 0.0 T 11-10-2018 Clos_0533 e2a6957527357de4ed35485e71357821 485 Pfam PF00571 CBS domain 97 140 5.8E-8 T 11-10-2018 IPR000644 CBS domain Clos_0533 e2a6957527357de4ed35485e71357821 485 Pfam PF00571 CBS domain 150 205 1.4E-7 T 11-10-2018 IPR000644 CBS domain Clos_0533 e2a6957527357de4ed35485e71357821 485 SUPERFAMILY SSF54631 66 205 8.21E-30 T 11-10-2018 Clos_0533 e2a6957527357de4ed35485e71357821 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 9 451 1.1E-198 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Clos_1567 e2efef2912384235a951ad45cf77adf6 200 SMART SM00855 1 151 3.8E-15 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Clos_1567 e2efef2912384235a951ad45cf77adf6 200 Gene3D G3DSA:3.40.50.1240 1 200 3.8E-68 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Clos_1567 e2efef2912384235a951ad45cf77adf6 200 SUPERFAMILY SSF53254 1 198 1.83E-63 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Clos_1567 e2efef2912384235a951ad45cf77adf6 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 1 190 3.4E-63 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Clos_1567 e2efef2912384235a951ad45cf77adf6 200 PIRSF PIRSF000709 1 193 4.6E-21 T 11-10-2018 Clos_1245 5c124f2be51f066f6c1bf16af6e097e2 398 Pfam PF06898 Putative stage IV sporulation protein YqfD 8 387 1.2E-129 T 11-10-2018 IPR010690 Putative stage IV sporulation YqfD Clos_1245 5c124f2be51f066f6c1bf16af6e097e2 398 PIRSF PIRSF029895 2 397 5.9E-122 T 11-10-2018 IPR010690 Putative stage IV sporulation YqfD Clos_1245 5c124f2be51f066f6c1bf16af6e097e2 398 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 6 389 2.6E-99 T 11-10-2018 IPR010690 Putative stage IV sporulation YqfD Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 160 2.3E-26 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 Gene3D G3DSA:3.90.105.10 28 167 7.0E-76 T 11-10-2018 Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 SUPERFAMILY SSF63882 10 167 1.44E-30 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 Pfam PF03454 MoeA C-terminal region (domain IV) 324 392 5.4E-6 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 SUPERFAMILY SSF53218 170 311 7.85E-30 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 Pfam PF00994 Probable molybdopterin binding domain 173 309 4.2E-13 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 SMART SM00852 173 310 1.0E-18 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 Gene3D G3DSA:3.40.980.10 168 320 7.0E-76 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 Gene3D G3DSA:2.170.190.11 52 134 7.0E-76 T 11-10-2018 Clos_0219 043025732b3c6b7a136aaba0fc80e224 401 Gene3D G3DSA:2.40.340.10 321 388 7.0E-76 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_0802 5593283ed3fc942f596f9ea62cac2fa4 97 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 6 49 3.0E-6 T 11-10-2018 Clos_0802 5593283ed3fc942f596f9ea62cac2fa4 97 SMART SM00877 5 81 1.7E-36 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0802 5593283ed3fc942f596f9ea62cac2fa4 97 Gene3D G3DSA:3.30.70.1710 1 97 2.8E-40 T 11-10-2018 Clos_0802 5593283ed3fc942f596f9ea62cac2fa4 97 Pfam PF00936 BMC domain 6 81 1.4E-28 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0802 5593283ed3fc942f596f9ea62cac2fa4 97 SUPERFAMILY SSF143414 5 92 3.01E-31 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_0802 5593283ed3fc942f596f9ea62cac2fa4 97 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 23 42 - T 11-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Clos_0987 554166f8774a5c49370367e4de753eac 466 Pfam PF13203 Putative metallopeptidase domain 89 280 2.0E-9 T 11-10-2018 IPR025154 Putative metallopeptidase domain Clos_0987 554166f8774a5c49370367e4de753eac 466 Pfam PF09967 VWA-like domain (DUF2201) 312 423 7.5E-17 T 11-10-2018 IPR018698 VWA-like domain Clos_0987 554166f8774a5c49370367e4de753eac 466 SUPERFAMILY SSF53300 308 403 6.45E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 Gene3D G3DSA:3.30.70.940 1 113 7.5E-45 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 ProSitePatterns PS01014 Transcription termination factor nusG signature. 155 164 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 SMART SM00738 4 112 2.0E-45 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 SUPERFAMILY SSF50104 116 172 1.07E-17 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 Pfam PF00467 KOW motif 121 153 1.1E-5 T 11-10-2018 IPR005824 KOW Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 7 172 6.8E-63 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 PRINTS PR00338 Transcription termination factor NUSG signature 148 164 3.1E-18 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 PRINTS PR00338 Transcription termination factor NUSG signature 130 145 3.1E-18 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 PRINTS PR00338 Transcription termination factor NUSG signature 59 71 3.1E-18 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 Gene3D G3DSA:2.30.30.30 114 172 2.8E-24 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 4 172 24.753 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 SMART SM00739 118 145 0.0012 T 11-10-2018 IPR005824 KOW Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 SUPERFAMILY SSF82679 5 108 4.58E-41 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Clos_0479 b3ab92462e33a3ac7d089489e58ed5a7 172 Pfam PF02357 Transcription termination factor nusG 6 108 4.3E-31 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Clos_1073 f68d2d0edac0fc009f8169b9612b1394 304 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 291 9.3E-65 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Clos_1073 f68d2d0edac0fc009f8169b9612b1394 304 Gene3D G3DSA:3.40.50.1100 45 146 1.1E-112 T 11-10-2018 Clos_1073 f68d2d0edac0fc009f8169b9612b1394 304 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Clos_1073 f68d2d0edac0fc009f8169b9612b1394 304 SUPERFAMILY SSF53686 2 301 9.3E-91 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clos_1073 f68d2d0edac0fc009f8169b9612b1394 304 Gene3D G3DSA:3.40.50.1100 9 298 1.1E-112 T 11-10-2018 Clos_0208 37e2fe3c15736fe4c9fb0e8c45eb5046 209 Gene3D G3DSA:3.90.550.10 2 204 5.9E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0208 37e2fe3c15736fe4c9fb0e8c45eb5046 209 Pfam PF12804 MobA-like NTP transferase domain 11 153 7.6E-30 T 11-10-2018 IPR025877 MobA-like NTP transferase Clos_0208 37e2fe3c15736fe4c9fb0e8c45eb5046 209 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 7 201 22.032 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Clos_0208 37e2fe3c15736fe4c9fb0e8c45eb5046 209 SUPERFAMILY SSF53448 8 198 2.93E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0238 66395883f8f66404a52b88992f6ead3a 479 Hamap MF_01916 Cardiolipin synthase. 7 479 43.867 T 11-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 Clos_0238 66395883f8f66404a52b88992f6ead3a 479 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 5 479 1.1E-163 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Clos_0238 66395883f8f66404a52b88992f6ead3a 479 Gene3D G3DSA:3.30.870.10 109 295 1.3E-47 T 11-10-2018 Clos_0238 66395883f8f66404a52b88992f6ead3a 479 SUPERFAMILY SSF56024 77 309 2.47E-56 T 11-10-2018 Clos_0238 66395883f8f66404a52b88992f6ead3a 479 SMART SM00155 216 243 4.1E-6 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Clos_0238 66395883f8f66404a52b88992f6ead3a 479 SMART SM00155 392 419 0.0032 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Clos_0238 66395883f8f66404a52b88992f6ead3a 479 SUPERFAMILY SSF56024 268 465 2.92E-47 T 11-10-2018 Clos_0238 66395883f8f66404a52b88992f6ead3a 479 Pfam PF13396 Phospholipase_D-nuclease N-terminal 13 55 2.3E-12 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal Clos_0238 66395883f8f66404a52b88992f6ead3a 479 Pfam PF13091 PLD-like domain 321 445 4.3E-27 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Clos_0238 66395883f8f66404a52b88992f6ead3a 479 Pfam PF13091 PLD-like domain 134 275 2.0E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Clos_0238 66395883f8f66404a52b88992f6ead3a 479 Gene3D G3DSA:3.30.870.10 309 454 3.3E-28 T 11-10-2018 Clos_1332 daf9c3fd502705ab5f171c4288c4098a 131 SUPERFAMILY SSF81330 10 123 8.5E-36 T 11-10-2018 IPR036019 Gated mechanosensitive channel Clos_1332 daf9c3fd502705ab5f171c4288c4098a 131 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site Clos_1332 daf9c3fd502705ab5f171c4288c4098a 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 3.6E-11 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Clos_1332 daf9c3fd502705ab5f171c4288c4098a 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 98 3.6E-11 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Clos_1332 daf9c3fd502705ab5f171c4288c4098a 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 80 88 3.6E-11 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Clos_1332 daf9c3fd502705ab5f171c4288c4098a 131 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 127 4.6E-45 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L Clos_1332 daf9c3fd502705ab5f171c4288c4098a 131 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 128 23.725 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Clos_1332 daf9c3fd502705ab5f171c4288c4098a 131 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 129 1.7E-48 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 Clos_1332 daf9c3fd502705ab5f171c4288c4098a 131 Gene3D G3DSA:1.10.1200.120 1 130 9.0E-43 T 11-10-2018 IPR036019 Gated mechanosensitive channel Clos_2184 311eb217aec455b9c62268c17e1a23e6 154 Gene3D G3DSA:1.20.1260.10 2 153 6.8E-11 T 11-10-2018 IPR012347 Ferritin-like Clos_2184 311eb217aec455b9c62268c17e1a23e6 154 SUPERFAMILY SSF47240 3 153 3.89E-8 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 Gene3D G3DSA:3.40.50.80 103 210 3.5E-20 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 211 252 1.8E-18 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 4 254 34.582 T 11-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 SUPERFAMILY SSF52343 94 252 2.36E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 Gene3D G3DSA:2.10.240.10 211 253 2.8E-18 T 11-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 Gene3D G3DSA:2.40.30.10 2 97 2.2E-27 T 11-10-2018 Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 PIRSF PIRSF006816 1 256 1.2E-66 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 SUPERFAMILY SSF63380 5 99 5.2E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 Pfam PF00970 Oxidoreductase FAD-binding domain 14 97 1.2E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 PRINTS PR00409 Phthalate dioxygenase reductase family signature 182 190 3.5E-5 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Clos_2192 aabb736847c1514523b68cabd6d3fe5b 256 PRINTS PR00409 Phthalate dioxygenase reductase family signature 109 128 3.5E-5 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Clos_0141 f426c5cfabf2abb0604f06e6ae61f56b 230 SUPERFAMILY SSF52540 4 226 2.4E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0141 f426c5cfabf2abb0604f06e6ae61f56b 230 Gene3D G3DSA:3.40.50.300 1 229 2.1E-69 T 11-10-2018 Clos_0141 f426c5cfabf2abb0604f06e6ae61f56b 230 SMART SM00382 33 228 2.3E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0141 f426c5cfabf2abb0604f06e6ae61f56b 230 Pfam PF00005 ABC transporter 24 172 2.5E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0141 f426c5cfabf2abb0604f06e6ae61f56b 230 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1296 a465ea986c57bc4c74eaaf84fa195dc7 96 SMART SM00990 1 83 1.5E-8 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 Clos_1296 a465ea986c57bc4c74eaaf84fa195dc7 96 Gene3D G3DSA:3.40.1350.10 1 94 7.7E-20 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Clos_1296 a465ea986c57bc4c74eaaf84fa195dc7 96 SUPERFAMILY SSF52980 5 83 3.04E-6 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Clos_1595 4fc4c82ea45a1b4316aa5bced2129063 180 PRINTS PR00502 NUDIX hydrolase family signature 85 100 8.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Clos_1595 4fc4c82ea45a1b4316aa5bced2129063 180 PRINTS PR00502 NUDIX hydrolase family signature 71 85 8.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Clos_1595 4fc4c82ea45a1b4316aa5bced2129063 180 SUPERFAMILY SSF55811 6 173 1.1E-50 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_1595 4fc4c82ea45a1b4316aa5bced2129063 180 Gene3D G3DSA:3.90.79.10 4 179 3.0E-57 T 11-10-2018 Clos_1595 4fc4c82ea45a1b4316aa5bced2129063 180 ProSitePatterns PS00893 Nudix box signature. 76 97 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Clos_1595 4fc4c82ea45a1b4316aa5bced2129063 180 Pfam PF00293 NUDIX domain 42 154 7.6E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_1595 4fc4c82ea45a1b4316aa5bced2129063 180 ProDom PD037294 PEPTIDE ACMNPV ORF38 ORF ORF_59 ORF61 ORF7 PXORF52 ORF-30 ORF79 45 125 0.003 T 11-10-2018 Clos_0962 31b3642ff75b4841e7f4b2b9058f1558 509 Pfam PF11230 Protein of unknown function (DUF3029) 17 504 5.3E-209 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted Clos_0962 31b3642ff75b4841e7f4b2b9058f1558 509 SUPERFAMILY SSF51998 28 467 4.88E-68 T 11-10-2018 Clos_0962 31b3642ff75b4841e7f4b2b9058f1558 509 PIRSF PIRSF028991 1 508 2.3E-186 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted Clos_0962 31b3642ff75b4841e7f4b2b9058f1558 509 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 6 504 1.1E-214 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted Clos_2137 4505afbe5a428d621bdfa7fbf6fab260 241 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 218 1.6E-62 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Clos_2137 4505afbe5a428d621bdfa7fbf6fab260 241 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 236 16.877 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Clos_2137 4505afbe5a428d621bdfa7fbf6fab260 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 82 100 8.9E-36 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Clos_2137 4505afbe5a428d621bdfa7fbf6fab260 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 100 126 8.9E-36 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Clos_2137 4505afbe5a428d621bdfa7fbf6fab260 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 10 37 8.9E-36 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Clos_2137 4505afbe5a428d621bdfa7fbf6fab260 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 151 179 8.9E-36 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Clos_2137 4505afbe5a428d621bdfa7fbf6fab260 241 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 11 223 6.4E-62 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Clos_1013 bf5a0124f818bfd30797c8bf7727c51d 226 Pfam PF02361 Cobalt transport protein 20 220 4.5E-42 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Clos_1013 bf5a0124f818bfd30797c8bf7727c51d 226 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 17 216 1.1E-46 T 11-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 Clos_2039 dbbd18be2977724e079707c5117b083b 178 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 172 2.0E-36 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Clos_2039 dbbd18be2977724e079707c5117b083b 178 Gene3D G3DSA:1.20.120.1760 2 174 3.0E-11 T 11-10-2018 Clos_2039 dbbd18be2977724e079707c5117b083b 178 PIRSF PIRSF000847 1 177 6.2E-44 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Clos_2039 dbbd18be2977724e079707c5117b083b 178 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 2.5E-14 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Clos_2039 dbbd18be2977724e079707c5117b083b 178 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Clos_0798 a877e422891afc0104f44c9bc6812206 303 PIRSF PIRSF018982 52 303 1.1E-104 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Clos_0798 a877e422891afc0104f44c9bc6812206 303 Gene3D G3DSA:1.10.30.40 53 118 2.5E-21 T 11-10-2018 Clos_0798 a877e422891afc0104f44c9bc6812206 303 Gene3D G3DSA:3.40.50.11240 120 300 1.1E-61 T 11-10-2018 Clos_0798 a877e422891afc0104f44c9bc6812206 303 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 65 301 40.431 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Clos_0798 a877e422891afc0104f44c9bc6812206 303 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 75 301 7.8E-82 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Clos_0670 61b1df928c226586d779ef61eeaad8b6 550 Pfam PF03063 Prismane/CO dehydrogenase family 5 543 2.6E-161 T 11-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Clos_0670 61b1df928c226586d779ef61eeaad8b6 550 SUPERFAMILY SSF56821 4 545 2.29E-190 T 11-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Clos_0670 61b1df928c226586d779ef61eeaad8b6 550 Gene3D G3DSA:3.40.50.2030 228 377 3.2E-68 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Clos_0670 61b1df928c226586d779ef61eeaad8b6 550 Gene3D G3DSA:1.20.1270.20 2 139 8.2E-45 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Clos_0670 61b1df928c226586d779ef61eeaad8b6 550 PIRSF PIRSF000076 5 548 2.0E-220 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Clos_0670 61b1df928c226586d779ef61eeaad8b6 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 5 545 4.5E-215 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Clos_0670 61b1df928c226586d779ef61eeaad8b6 550 Gene3D G3DSA:3.40.50.2030 378 546 1.8E-62 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Clos_0670 61b1df928c226586d779ef61eeaad8b6 550 Gene3D G3DSA:1.20.1270.20 143 226 1.7E-24 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Clos_0670 61b1df928c226586d779ef61eeaad8b6 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 5 547 20.423 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Clos_0759 f3f2e87633c6a676ef5e55e99592a9c5 189 Gene3D G3DSA:1.10.357.10 2 183 2.8E-39 T 11-10-2018 Clos_0759 f3f2e87633c6a676ef5e55e99592a9c5 189 SUPERFAMILY SSF46689 3 67 4.41E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0759 f3f2e87633c6a676ef5e55e99592a9c5 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 55 2.8E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_1682 dd764f2a1b4b7889b4dce5b3e537ad1f 245 Gene3D G3DSA:3.30.70.580 1 106 1.4E-34 T 11-10-2018 Clos_1682 dd764f2a1b4b7889b4dce5b3e537ad1f 245 Pfam PF01416 tRNA pseudouridine synthase 144 245 1.7E-25 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1682 dd764f2a1b4b7889b4dce5b3e537ad1f 245 Pfam PF01416 tRNA pseudouridine synthase 8 105 4.7E-8 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1682 dd764f2a1b4b7889b4dce5b3e537ad1f 245 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 34.341 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1682 dd764f2a1b4b7889b4dce5b3e537ad1f 245 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 240 1.7E-64 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1682 dd764f2a1b4b7889b4dce5b3e537ad1f 245 PIRSF PIRSF001430 1 245 1.4E-76 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1682 dd764f2a1b4b7889b4dce5b3e537ad1f 245 SUPERFAMILY SSF55120 1 245 1.44E-78 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1682 dd764f2a1b4b7889b4dce5b3e537ad1f 245 Gene3D G3DSA:3.30.70.660 107 244 1.5E-45 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Clos_1012 640917994d69a7a6fcb1f01a482499f4 97 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 97 44.63 T 11-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Clos_1012 640917994d69a7a6fcb1f01a482499f4 97 TIGRFAM TIGR01165 cbiN: cobalt transport protein 4 89 8.0E-34 T 11-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Clos_1012 640917994d69a7a6fcb1f01a482499f4 97 Pfam PF02553 Cobalt transport protein component CbiN 8 74 1.1E-30 T 11-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Clos_0727 2fd56056b0822d61bc658ddee79cdf38 216 SMART SM00448 2 110 2.0E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0727 2fd56056b0822d61bc658ddee79cdf38 216 SUPERFAMILY SSF52172 2 175 4.98E-32 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0727 2fd56056b0822d61bc658ddee79cdf38 216 Gene3D G3DSA:1.10.10.10 119 216 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0727 2fd56056b0822d61bc658ddee79cdf38 216 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 215 4.4E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0727 2fd56056b0822d61bc658ddee79cdf38 216 Gene3D G3DSA:3.40.50.2300 1 117 4.0E-29 T 11-10-2018 Clos_0727 2fd56056b0822d61bc658ddee79cdf38 216 SMART SM00862 143 215 6.1E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0727 2fd56056b0822d61bc658ddee79cdf38 216 Pfam PF00072 Response regulator receiver domain 4 110 3.8E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2443 fbfe97e23c2210b6794ed890f0236f92 272 Gene3D G3DSA:3.20.20.70 1 272 4.9E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2443 fbfe97e23c2210b6794ed890f0236f92 272 Pfam PF05853 beta-keto acid cleavage enzyme 3 271 4.0E-106 T 11-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 Clos_0720 0c9b7dbee428f4501fdb4081691cba34 171 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 12 164 1.8E-32 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Clos_0720 0c9b7dbee428f4501fdb4081691cba34 171 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Clos_0720 0c9b7dbee428f4501fdb4081691cba34 171 Pfam PF01066 CDP-alcohol phosphatidyltransferase 7 70 2.9E-17 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Clos_0720 0c9b7dbee428f4501fdb4081691cba34 171 Gene3D G3DSA:1.20.120.1760 2 169 8.8E-13 T 11-10-2018 Clos_1533 68e5fde173baaebe6c6e64e962daf81f 87 Pfam PF00312 Ribosomal protein S15 6 86 1.8E-39 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1533 68e5fde173baaebe6c6e64e962daf81f 87 SUPERFAMILY SSF47060 2 87 3.53E-37 T 11-10-2018 IPR009068 S15/NS1, RNA-binding Clos_1533 68e5fde173baaebe6c6e64e962daf81f 87 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 87 3.7E-42 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1533 68e5fde173baaebe6c6e64e962daf81f 87 ProSitePatterns PS00362 Ribosomal protein S15 signature. 37 67 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1533 68e5fde173baaebe6c6e64e962daf81f 87 Gene3D G3DSA:1.10.287.10 1 87 3.5E-38 T 11-10-2018 Clos_1533 68e5fde173baaebe6c6e64e962daf81f 87 SMART SM01387 6 86 2.5E-55 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1533 68e5fde173baaebe6c6e64e962daf81f 87 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 87 23.558 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1533 68e5fde173baaebe6c6e64e962daf81f 87 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 9 86 1.0E-34 T 11-10-2018 Clos_2868 6941018d08f4dc3ab7dbc51a503c290b 257 Pfam PF13614 AAA domain 2 178 3.0E-73 T 11-10-2018 IPR025669 AAA domain Clos_2868 6941018d08f4dc3ab7dbc51a503c290b 257 SUPERFAMILY SSF52540 2 253 1.01E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2868 6941018d08f4dc3ab7dbc51a503c290b 257 PIRSF PIRSF009320 2 76 7.4E-15 T 11-10-2018 Clos_2868 6941018d08f4dc3ab7dbc51a503c290b 257 PIRSF PIRSF009320 91 254 5.4E-6 T 11-10-2018 Clos_2868 6941018d08f4dc3ab7dbc51a503c290b 257 Gene3D G3DSA:3.40.50.300 1 254 4.2E-85 T 11-10-2018 Clos_0704 8fea113aa76758ba0bb4401f9d2c697c 831 SUPERFAMILY SSF53271 89 244 8.38E-7 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_0704 8fea113aa76758ba0bb4401f9d2c697c 831 Pfam PF11202 Phosphoribosyl transferase (PRTase) 473 721 4.4E-111 T 11-10-2018 IPR011215 Phosphoribosyl transferase Clos_0704 8fea113aa76758ba0bb4401f9d2c697c 831 Pfam PF15608 PELOTA RNA binding domain 748 828 1.6E-35 T 11-10-2018 IPR028157 PELOTA RNA-binding domain Clos_0704 8fea113aa76758ba0bb4401f9d2c697c 831 Pfam PF12500 TRSP domain C terminus to PRTase_2 324 450 5.2E-40 T 11-10-2018 IPR022537 TRSP domain Clos_0704 8fea113aa76758ba0bb4401f9d2c697c 831 Pfam PF15609 Phosphoribosyl transferase 42 262 8.3E-73 T 11-10-2018 Clos_2665 66ebcb95f63cc267b5f4ec427af68129 190 Pfam PF07670 Nucleoside recognition 42 147 3.8E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_2121 a85b87e294357424dc08fd425be1ad23 222 Pfam PF05949 Bacterial protein of unknown function (DUF881) 77 218 4.8E-36 T 11-10-2018 IPR010273 Protein of unknown function DUF881 Clos_2121 a85b87e294357424dc08fd425be1ad23 222 Gene3D G3DSA:3.30.70.1880 75 222 4.8E-32 T 11-10-2018 Clos_2623 86752529b51912a9a586868dbc3794c1 286 SUPERFAMILY SSF56349 4 283 4.41E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Clos_2623 86752529b51912a9a586868dbc3794c1 286 Gene3D G3DSA:1.10.443.10 110 286 4.9E-44 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Clos_2623 86752529b51912a9a586868dbc3794c1 286 Gene3D G3DSA:1.10.150.130 1 109 1.3E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Clos_2623 86752529b51912a9a586868dbc3794c1 286 Pfam PF00589 Phage integrase family 114 274 4.4E-33 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Clos_2623 86752529b51912a9a586868dbc3794c1 286 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 92 4.7E-9 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Clos_0839 b96cab31b12f862199cbf9db7010f79d 316 Pfam PF04294 VanW like protein 109 234 2.5E-47 T 11-10-2018 IPR007391 Vancomycin resistance VanW Clos_0839 b96cab31b12f862199cbf9db7010f79d 316 Pfam PF07501 G5 domain 255 314 5.8E-5 T 11-10-2018 IPR011098 G5 domain Clos_1067 83db093d7944ae9f51adb2c4f8da7a4f 71 Pfam PF00403 Heavy-metal-associated domain 6 64 1.5E-14 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Clos_1067 83db093d7944ae9f51adb2c4f8da7a4f 71 Gene3D G3DSA:3.30.70.100 1 70 3.0E-19 T 11-10-2018 Clos_1067 83db093d7944ae9f51adb2c4f8da7a4f 71 SUPERFAMILY SSF55008 1 67 7.2E-17 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Clos_0547 008d1af42a18f42280605574395d6b71 234 Gene3D G3DSA:3.40.50.1860 106 215 1.5E-79 T 11-10-2018 Clos_0547 008d1af42a18f42280605574395d6b71 234 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 227 8.6E-69 T 11-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Clos_0547 008d1af42a18f42280605574395d6b71 234 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 192 202 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_0547 008d1af42a18f42280605574395d6b71 234 SUPERFAMILY SSF53681 3 114 5.07E-34 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_0547 008d1af42a18f42280605574395d6b71 234 Gene3D G3DSA:3.40.50.1860 4 220 1.5E-79 T 11-10-2018 Clos_0547 008d1af42a18f42280605574395d6b71 234 SUPERFAMILY SSF53681 110 214 4.91E-24 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_0547 008d1af42a18f42280605574395d6b71 234 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 219 6.6E-58 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Clos_1276 e5891f2de4143b13f34260c081890a30 734 Pfam PF00092 von Willebrand factor type A domain 556 702 2.1E-5 T 11-10-2018 IPR002035 von Willebrand factor, type A Clos_1276 e5891f2de4143b13f34260c081890a30 734 SUPERFAMILY SSF53300 548 731 7.31E-11 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_1276 e5891f2de4143b13f34260c081890a30 734 Pfam PF07728 AAA domain (dynein-related subfamily) 54 99 6.5E-5 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Clos_1276 e5891f2de4143b13f34260c081890a30 734 SUPERFAMILY SSF52540 32 320 6.8E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1276 e5891f2de4143b13f34260c081890a30 734 Gene3D G3DSA:3.40.50.410 546 733 2.4E-7 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_0246 739aaa376c65839fa4b5f54626bc2cbd 174 Gene3D G3DSA:3.60.21.10 1 138 4.3E-11 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_0246 739aaa376c65839fa4b5f54626bc2cbd 174 Pfam PF00149 Calcineurin-like phosphoesterase 2 150 7.1E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Clos_0246 739aaa376c65839fa4b5f54626bc2cbd 174 SUPERFAMILY SSF56300 2 137 3.64E-16 T 11-10-2018 Clos_1777 a403333a0e3ddd15a94801f1cc3cfbff 374 Gene3D G3DSA:3.90.1720.10 235 374 2.8E-37 T 11-10-2018 Clos_1777 a403333a0e3ddd15a94801f1cc3cfbff 374 Pfam PF08239 Bacterial SH3 domain 111 163 1.4E-14 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Clos_1777 a403333a0e3ddd15a94801f1cc3cfbff 374 Gene3D G3DSA:2.30.30.40 95 165 6.4E-16 T 11-10-2018 Clos_1777 a403333a0e3ddd15a94801f1cc3cfbff 374 SMART SM00287 169 231 6.5 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Clos_1777 a403333a0e3ddd15a94801f1cc3cfbff 374 SMART SM00287 31 95 4.9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Clos_1777 a403333a0e3ddd15a94801f1cc3cfbff 374 SMART SM00287 103 166 2.5E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Clos_1777 a403333a0e3ddd15a94801f1cc3cfbff 374 SUPERFAMILY SSF54001 243 374 1.96E-36 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Clos_1777 a403333a0e3ddd15a94801f1cc3cfbff 374 Pfam PF00877 NlpC/P60 family 256 373 5.4E-21 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Clos_1777 a403333a0e3ddd15a94801f1cc3cfbff 374 Gene3D G3DSA:2.30.30.40 168 231 5.9E-7 T 11-10-2018 Clos_0248 58c197d609147df5b5f4f8bbb1df633f 276 SUPERFAMILY SSF55469 3 179 2.88E-18 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_0248 58c197d609147df5b5f4f8bbb1df633f 276 Pfam PF14512 Putative TM nitroreductase 4 235 2.8E-28 T 11-10-2018 IPR029478 Putative nitroreductase TM1586 Clos_0248 58c197d609147df5b5f4f8bbb1df633f 276 Gene3D G3DSA:3.40.109.10 1 146 9.8E-23 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_0248 58c197d609147df5b5f4f8bbb1df633f 276 SUPERFAMILY SSF55469 182 276 1.7E-7 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_1137 79a7af69698fab4f09575c92bf07f60e 476 Gene3D G3DSA:1.10.10.1100 384 461 8.9E-22 T 11-10-2018 Clos_1137 79a7af69698fab4f09575c92bf07f60e 476 Pfam PF01266 FAD dependent oxidoreductase 3 353 6.1E-63 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Clos_1137 79a7af69698fab4f09575c92bf07f60e 476 Gene3D G3DSA:3.50.50.60 3 348 3.5E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1137 79a7af69698fab4f09575c92bf07f60e 476 SUPERFAMILY SSF51905 1 378 6.04E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1137 79a7af69698fab4f09575c92bf07f60e 476 Gene3D G3DSA:3.30.9.10 86 314 3.5E-126 T 11-10-2018 Clos_1137 79a7af69698fab4f09575c92bf07f60e 476 Pfam PF04324 BFD-like [2Fe-2S] binding domain 398 452 7.0E-17 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 Pfam PF00557 Metallopeptidase family M24 312 523 1.1E-40 T 11-10-2018 IPR000994 Peptidase M24 Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 SUPERFAMILY SSF53092 178 288 4.19E-7 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 Pfam PF01321 Creatinase/Prolidase N-terminal domain 7 134 2.6E-18 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 Gene3D G3DSA:3.40.350.10 148 297 3.6E-46 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 Gene3D G3DSA:3.40.350.10 1 147 9.4E-48 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 Gene3D G3DSA:3.90.230.10 301 592 6.0E-93 T 11-10-2018 Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 Pfam PF16188 C-terminal region of peptidase_M24 532 592 1.9E-22 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 SUPERFAMILY SSF55920 304 558 8.11E-53 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 Pfam PF16189 Creatinase/Prolidase N-terminal domain 149 307 2.7E-50 T 11-10-2018 Clos_1156 383f92c8e5b4dd86f57403985db7ab56 592 SUPERFAMILY SSF53092 10 135 9.07E-14 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 367 411 2.09E-12 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 64 131 3.5E-23 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 544 588 9.81E-11 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 135 179 2.22E-12 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 483 527 2.09E-10 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 667 711 4.19E-11 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 251 295 2.09E-12 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 193 237 2.88E-12 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 16 61 4.32E-11 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 309 353 2.0E-20 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 483 527 4.1E-16 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 76 120 5.8E-21 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 367 411 2.0E-20 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 425 469 6.5E-20 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 605 649 5.4E-17 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 667 711 3.3E-18 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 17 61 3.6E-15 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 544 588 7.7E-17 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 251 295 2.0E-20 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 193 237 5.2E-20 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SMART SM00257 135 179 2.8E-19 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 309 353 2.09E-12 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 423 469 7.3E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 15 61 1.8E-20 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 365 411 3.2E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 133 179 1.1E-21 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 542 588 2.3E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 307 353 3.2E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 481 527 7.4E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 249 295 3.2E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 665 712 1.9E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 191 237 9.3E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Gene3D G3DSA:3.10.350.10 603 649 1.9E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 425 469 2.49E-12 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 75 120 2.62E-13 T 11-10-2018 Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 545 588 5.1E-13 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 136 179 2.6E-15 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 18 61 2.7E-11 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 194 237 1.8E-15 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 606 649 4.5E-13 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 668 711 1.2E-14 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 252 295 5.1E-16 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 368 411 5.1E-16 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 426 469 9.0E-16 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 484 527 1.7E-12 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 310 353 5.1E-16 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 Pfam PF01476 LysM domain 77 120 3.7E-16 T 11-10-2018 IPR018392 LysM domain Clos_1944 8185ca02a7826bca46a3f7b2e19c7ecf 713 SUPERFAMILY SSF54106 605 649 1.02E-10 T 11-10-2018 Clos_1471 5865f3bb1cbc262e2bd3590e56cfb2b6 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 114 22.388 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 Clos_1471 5865f3bb1cbc262e2bd3590e56cfb2b6 117 SUPERFAMILY SSF52980 9 109 1.82E-25 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Clos_1471 5865f3bb1cbc262e2bd3590e56cfb2b6 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 102 2.1E-25 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 Clos_1471 5865f3bb1cbc262e2bd3590e56cfb2b6 117 Pfam PF02021 Uncharacterised protein family UPF0102 9 101 7.4E-31 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 Clos_1471 5865f3bb1cbc262e2bd3590e56cfb2b6 117 Gene3D G3DSA:3.40.1350.10 8 117 1.4E-31 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Clos_0912 80edf2a482278f4b350e175fdc85c296 453 Gene3D G3DSA:2.20.230.10 381 452 1.9E-11 T 11-10-2018 Clos_0912 80edf2a482278f4b350e175fdc85c296 453 SMART SM01208 375 452 1.0E-20 T 11-10-2018 IPR011098 G5 domain Clos_0912 80edf2a482278f4b350e175fdc85c296 453 Pfam PF04294 VanW like protein 240 368 1.0E-54 T 11-10-2018 IPR007391 Vancomycin resistance VanW Clos_0912 80edf2a482278f4b350e175fdc85c296 453 Pfam PF12229 Putative peptidoglycan binding domain 87 199 9.0E-26 T 11-10-2018 IPR022029 Putative peptidoglycan binding domain Clos_0912 80edf2a482278f4b350e175fdc85c296 453 Pfam PF07501 G5 domain 383 451 1.3E-13 T 11-10-2018 IPR011098 G5 domain Clos_2422 f0426327b6e1af66c4ec6688b46f6379 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Clos_2422 f0426327b6e1af66c4ec6688b46f6379 85 SUPERFAMILY SSF52833 3 83 1.5E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_2422 f0426327b6e1af66c4ec6688b46f6379 85 PRINTS PR00160 Glutaredoxin signature 46 59 1.0E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup Clos_2422 f0426327b6e1af66c4ec6688b46f6379 85 PRINTS PR00160 Glutaredoxin signature 4 22 1.0E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup Clos_2422 f0426327b6e1af66c4ec6688b46f6379 85 PRINTS PR00160 Glutaredoxin signature 60 73 1.0E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup Clos_2422 f0426327b6e1af66c4ec6688b46f6379 85 Pfam PF00462 Glutaredoxin 4 62 4.2E-23 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Clos_2422 f0426327b6e1af66c4ec6688b46f6379 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 80 2.0E-29 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 Clos_2422 f0426327b6e1af66c4ec6688b46f6379 85 Gene3D G3DSA:3.40.30.10 1 84 2.8E-31 T 11-10-2018 Clos_1763 aa0ba422e6c0d489f7be256050c5e93e 165 Pfam PF04093 rod shape-determining protein MreD 2 157 5.8E-17 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Clos_1763 aa0ba422e6c0d489f7be256050c5e93e 165 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 2 152 1.1E-23 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Clos_1763 aa0ba422e6c0d489f7be256050c5e93e 165 PIRSF PIRSF037497 1 165 1.5E-48 T 11-10-2018 IPR017225 Cell shape-determining protein MreD, predicted Clos_0769 53ac62e9ff27be4e80e1685412f8835c 496 Gene3D G3DSA:1.10.10.10 9 108 9.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0769 53ac62e9ff27be4e80e1685412f8835c 496 SUPERFAMILY SSF53383 113 474 7.12E-80 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_0769 53ac62e9ff27be4e80e1685412f8835c 496 Gene3D G3DSA:3.40.640.10 109 468 8.4E-116 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0769 53ac62e9ff27be4e80e1685412f8835c 496 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 3.4E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0769 53ac62e9ff27be4e80e1685412f8835c 496 SMART SM00345 16 75 3.3E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0769 53ac62e9ff27be4e80e1685412f8835c 496 Pfam PF00155 Aminotransferase class I and II 143 441 6.1E-17 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_0769 53ac62e9ff27be4e80e1685412f8835c 496 SUPERFAMILY SSF46785 5 84 2.99E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0261 3d9e3ee28acc96c0d83ec904f5b4d95b 312 Gene3D G3DSA:1.50.10.150 4 305 4.6E-42 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily Clos_0261 3d9e3ee28acc96c0d83ec904f5b4d95b 312 Pfam PF03595 Voltage-dependent anion channel 15 296 2.2E-24 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Clos_1701 1ac64b169de1630eb99ba02627baf61f 267 Pfam PF06738 Putative threonine/serine exporter 13 255 1.8E-76 T 11-10-2018 IPR010619 Putative threonine/serine exporter Clos_2582 53e1faeeb6fac34be3d6c0183e68910b 317 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 61 305 3.0E-81 T 11-10-2018 IPR010787 Protein of unknown function DUF1385 Clos_2582 53e1faeeb6fac34be3d6c0183e68910b 317 Pfam PF07136 Protein of unknown function (DUF1385) 61 308 2.1E-92 T 11-10-2018 IPR010787 Protein of unknown function DUF1385 Clos_1442 ad72a7d568c7bd5d31f1e2b3139b21c8 186 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 3.5E-48 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Clos_1442 ad72a7d568c7bd5d31f1e2b3139b21c8 186 Gene3D G3DSA:3.40.50.150 1 185 1.4E-55 T 11-10-2018 Clos_1442 ad72a7d568c7bd5d31f1e2b3139b21c8 186 Pfam PF03602 Conserved hypothetical protein 95 1 181 2.2E-53 T 11-10-2018 Clos_1442 ad72a7d568c7bd5d31f1e2b3139b21c8 186 SUPERFAMILY SSF53335 1 181 6.0E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1442 ad72a7d568c7bd5d31f1e2b3139b21c8 186 PIRSF PIRSF004553 1 184 3.4E-52 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Clos_2437 bedb00b6c8702a1843e261cc117ef1b3 191 Pfam PF12822 ECF transporter, substrate-specific component 11 174 7.0E-9 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Clos_2437 bedb00b6c8702a1843e261cc117ef1b3 191 Gene3D G3DSA:1.10.1760.20 11 185 5.9E-25 T 11-10-2018 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 SUPERFAMILY SSF51182 25 88 2.27E-7 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 270 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 Gene3D G3DSA:1.10.10.60 176 223 2.6E-14 T 11-10-2018 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 SUPERFAMILY SSF51445 348 712 7.48E-67 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 SUPERFAMILY SSF46689 175 225 6.18E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 Pfam PF12833 Helix-turn-helix domain 198 275 1.4E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 SMART SM00342 191 274 8.6E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 Pfam PF02311 AraC-like ligand binding domain 25 78 1.7E-7 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 Gene3D G3DSA:2.60.40.1500 711 848 2.5E-140 T 11-10-2018 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 PRINTS PR00745 Glycosyl hydrolase family 39 signature 462 479 1.4E-15 T 11-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 PRINTS PR00745 Glycosyl hydrolase family 39 signature 415 431 1.4E-15 T 11-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 PRINTS PR00745 Glycosyl hydrolase family 39 signature 479 495 1.4E-15 T 11-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 PRINTS PR00745 Glycosyl hydrolase family 39 signature 787 798 1.4E-15 T 11-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 PRINTS PR00745 Glycosyl hydrolase family 39 signature 546 560 1.4E-15 T 11-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 PRINTS PR00745 Glycosyl hydrolase family 39 signature 798 812 1.4E-15 T 11-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 Pfam PF01229 Glycosyl hydrolases family 39 336 825 6.2E-68 T 11-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 Gene3D G3DSA:3.20.20.80 364 710 2.5E-140 T 11-10-2018 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 Gene3D G3DSA:2.60.120.10 19 83 5.2E-6 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 Gene3D G3DSA:1.10.10.60 224 282 4.2E-16 T 11-10-2018 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 SUPERFAMILY SSF51011 703 852 5.04E-18 T 11-10-2018 Clos_0056 605e7f1e73b880d56bf2491eb5106510 854 SUPERFAMILY SSF46689 227 275 1.84E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0122 d24701c39cecedfb3cc4eeec3434fb46 307 SMART SM00382 30 212 1.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0122 d24701c39cecedfb3cc4eeec3434fb46 307 SUPERFAMILY SSF52540 3 231 2.98E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0122 d24701c39cecedfb3cc4eeec3434fb46 307 Pfam PF00005 ABC transporter 21 162 1.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0122 d24701c39cecedfb3cc4eeec3434fb46 307 Gene3D G3DSA:3.40.50.300 2 241 3.0E-54 T 11-10-2018 Clos_0681 2a72394a802b1098599e27f48a1749c4 103 Pfam PF14898 Domain of unknown function (DUF4491) 2 93 7.0E-37 T 11-10-2018 IPR027890 Protein of unknown function DUF4491 Clos_1653 5dc4940e557b17c7f9448cd1b0ade899 176 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 79 92 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1653 5dc4940e557b17c7f9448cd1b0ade899 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 126 1.8E-14 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1653 5dc4940e557b17c7f9448cd1b0ade899 176 Pfam PF04542 Sigma-70 region 2 55 124 5.9E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1653 5dc4940e557b17c7f9448cd1b0ade899 176 PIRSF PIRSF000770 4 147 2.2E-44 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1653 5dc4940e557b17c7f9448cd1b0ade899 176 SUPERFAMILY SSF88946 10 124 8.95E-36 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1653 5dc4940e557b17c7f9448cd1b0ade899 176 Gene3D G3DSA:1.20.120.1810 20 124 1.6E-24 T 11-10-2018 Clos_0400 e99cc24d5239cd0ddc78501c01f8ed89 291 Pfam PF00892 EamA-like transporter family 146 271 2.5E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_0400 e99cc24d5239cd0ddc78501c01f8ed89 291 Pfam PF00892 EamA-like transporter family 14 137 1.9E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_0400 e99cc24d5239cd0ddc78501c01f8ed89 291 SUPERFAMILY SSF103481 51 140 3.66E-12 T 11-10-2018 Clos_0400 e99cc24d5239cd0ddc78501c01f8ed89 291 SUPERFAMILY SSF103481 185 272 4.32E-10 T 11-10-2018 Clos_0439 2d3bf46c76f5d7301a5dd0e27e573c6d 135 SUPERFAMILY SSF54593 1 133 5.77E-40 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Clos_0439 2d3bf46c76f5d7301a5dd0e27e573c6d 135 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 5 132 4.9E-52 T 11-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 Clos_0439 2d3bf46c76f5d7301a5dd0e27e573c6d 135 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 117 9.3E-27 T 11-10-2018 Clos_0439 2d3bf46c76f5d7301a5dd0e27e573c6d 135 Gene3D G3DSA:3.10.180.10 1 133 1.2E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Clos_1378 a43d2165b72e1c3538c9d46fd595a9ae 350 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 1 344 1.7E-108 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_1378 a43d2165b72e1c3538c9d46fd595a9ae 350 Pfam PF01098 Cell cycle protein 1 346 9.8E-102 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_2379 5a485ce85b1b3c9473fa8f4c3d44447f 519 Gene3D G3DSA:3.40.50.300 2 248 1.5E-61 T 11-10-2018 Clos_2379 5a485ce85b1b3c9473fa8f4c3d44447f 519 Gene3D G3DSA:3.40.50.300 256 499 1.8E-40 T 11-10-2018 Clos_2379 5a485ce85b1b3c9473fa8f4c3d44447f 519 SUPERFAMILY SSF52540 5 233 9.15E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2379 5a485ce85b1b3c9473fa8f4c3d44447f 519 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2379 5a485ce85b1b3c9473fa8f4c3d44447f 519 SMART SM00382 287 484 5.6 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2379 5a485ce85b1b3c9473fa8f4c3d44447f 519 SMART SM00382 32 230 1.7E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2379 5a485ce85b1b3c9473fa8f4c3d44447f 519 Pfam PF00005 ABC transporter 24 173 1.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2379 5a485ce85b1b3c9473fa8f4c3d44447f 519 Pfam PF00005 ABC transporter 278 435 9.7E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2379 5a485ce85b1b3c9473fa8f4c3d44447f 519 SUPERFAMILY SSF52540 261 494 3.52E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1610 5714ecd1ca02c79eca5c9ee3cc18beb5 77 SUPERFAMILY SSF116842 2 66 4.32E-19 T 11-10-2018 Clos_1610 5714ecd1ca02c79eca5c9ee3cc18beb5 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 5 61 1.5E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Clos_1610 5714ecd1ca02c79eca5c9ee3cc18beb5 77 Gene3D G3DSA:1.10.287.1040 2 75 9.2E-20 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Clos_1610 5714ecd1ca02c79eca5c9ee3cc18beb5 77 Pfam PF02609 Exonuclease VII small subunit 6 56 6.6E-19 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Clos_1610 5714ecd1ca02c79eca5c9ee3cc18beb5 77 PIRSF PIRSF006488 1 77 3.8E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Clos_1610 5714ecd1ca02c79eca5c9ee3cc18beb5 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 5 65 14.014 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Clos_0311 572ce30ae03a572639d3bd5e0655b0f7 329 Pfam PF01032 FecCD transport family 20 326 3.2E-98 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_0311 572ce30ae03a572639d3bd5e0655b0f7 329 Gene3D G3DSA:1.10.3470.10 6 329 4.7E-101 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0311 572ce30ae03a572639d3bd5e0655b0f7 329 SUPERFAMILY SSF81345 7 326 4.32E-85 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 Gene3D G3DSA:3.40.50.1820 1 269 6.5E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 3.3E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 214 228 3.3E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 3.3E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 PRINTS PR00412 Epoxide hydrolase signature 30 48 7.2E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 PRINTS PR00412 Epoxide hydrolase signature 50 65 7.2E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 PRINTS PR00412 Epoxide hydrolase signature 212 228 7.2E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 PRINTS PR00412 Epoxide hydrolase signature 245 267 7.2E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 SUPERFAMILY SSF53474 4 269 5.58E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_1937 0bb9ceb7eb1713f28c88eda989c863d1 281 Pfam PF00561 alpha/beta hydrolase fold 25 124 1.2E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_1551 1b4b24ba2de12f583f4881a303aec415 80 Pfam PF17209 Hfq protein 7 69 2.0E-33 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Clos_1551 1b4b24ba2de12f583f4881a303aec415 80 SUPERFAMILY SSF50182 6 65 1.04E-24 T 11-10-2018 IPR010920 LSM domain superfamily Clos_1551 1b4b24ba2de12f583f4881a303aec415 80 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 1.9E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Clos_1551 1b4b24ba2de12f583f4881a303aec415 80 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 30.04 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Clos_1551 1b4b24ba2de12f583f4881a303aec415 80 Gene3D G3DSA:2.30.30.100 1 73 4.0E-33 T 11-10-2018 Clos_1223 0d2a95da7471c169838f965fc35edcac 501 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 247 415 1.5E-29 T 11-10-2018 IPR004477 ComEC/Rec2-related protein Clos_1223 0d2a95da7471c169838f965fc35edcac 501 Pfam PF03772 Competence protein 226 486 1.3E-56 T 11-10-2018 IPR004477 ComEC/Rec2-related protein Clos_0948 436793e59f99f9c099c079efcc4dd710 394 Gene3D G3DSA:3.40.50.1980 65 378 7.5E-18 T 11-10-2018 Clos_0948 436793e59f99f9c099c079efcc4dd710 394 SUPERFAMILY SSF53807 101 377 1.3E-24 T 11-10-2018 Clos_0948 436793e59f99f9c099c079efcc4dd710 394 Pfam PF01497 Periplasmic binding protein 113 357 2.0E-8 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_1380 4aad12a23bc5d9d22d35310088c65998 421 Gene3D G3DSA:3.65.10.10 21 228 5.9E-162 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Clos_1380 4aad12a23bc5d9d22d35310088c65998 421 SUPERFAMILY SSF55205 2 413 9.55E-132 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Clos_1380 4aad12a23bc5d9d22d35310088c65998 421 Gene3D G3DSA:3.65.10.10 6 413 5.9E-162 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Clos_1380 4aad12a23bc5d9d22d35310088c65998 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 414 7.1E-163 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_1380 4aad12a23bc5d9d22d35310088c65998 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 41.936 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_1380 4aad12a23bc5d9d22d35310088c65998 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 3.8E-97 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Clos_2381 54935089ae95712e3a8692ee56c8bf99 222 Pfam PF13545 Crp-like helix-turn-helix domain 149 214 2.4E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2381 54935089ae95712e3a8692ee56c8bf99 222 Gene3D G3DSA:1.10.10.10 144 215 1.2E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2381 54935089ae95712e3a8692ee56c8bf99 222 SUPERFAMILY SSF46785 146 216 4.57E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2381 54935089ae95712e3a8692ee56c8bf99 222 SMART SM00100 1 131 1.3E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Clos_2381 54935089ae95712e3a8692ee56c8bf99 222 SUPERFAMILY SSF51206 26 138 6.42E-29 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Clos_2381 54935089ae95712e3a8692ee56c8bf99 222 Gene3D G3DSA:2.60.120.10 12 140 6.5E-26 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_2381 54935089ae95712e3a8692ee56c8bf99 222 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 1.6E-18 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Clos_0961 02a91a66fa0884adce6cbfa0079f4419 362 SUPERFAMILY SSF53822 64 292 5.1E-13 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Clos_0961 02a91a66fa0884adce6cbfa0079f4419 362 Gene3D G3DSA:3.40.50.2300 54 319 7.3E-116 T 11-10-2018 Clos_0961 02a91a66fa0884adce6cbfa0079f4419 362 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 54 354 5.4E-80 T 11-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Clos_0961 02a91a66fa0884adce6cbfa0079f4419 362 Gene3D G3DSA:3.40.50.2300 153 351 7.3E-116 T 11-10-2018 Clos_1384 65ca037c04e47a4ab2dc6445b700e2c7 113 Pfam PF06947 Protein of unknown function (DUF1290) 23 107 1.6E-38 T 11-10-2018 IPR009709 Protein of unknown function DUF1290 Clos_1384 65ca037c04e47a4ab2dc6445b700e2c7 113 PIRSF PIRSF018579 1 113 1.2E-41 T 11-10-2018 IPR009709 Protein of unknown function DUF1290 Clos_2810 0e1cadc976a9e64554530857b7df815d 261 Pfam PF00005 ABC transporter 20 167 3.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2810 0e1cadc976a9e64554530857b7df815d 261 Gene3D G3DSA:3.40.50.300 1 257 1.6E-68 T 11-10-2018 Clos_2810 0e1cadc976a9e64554530857b7df815d 261 SMART SM00382 28 225 1.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2810 0e1cadc976a9e64554530857b7df815d 261 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2810 0e1cadc976a9e64554530857b7df815d 261 SUPERFAMILY SSF52540 3 230 3.86E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0804 09219d11e88cd4cb961bae09ef9122ce 211 PIRSF PIRSF010130 1 211 5.1E-83 T 11-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Clos_0804 09219d11e88cd4cb961bae09ef9122ce 211 Pfam PF06130 Phosphate propanoyltransferase 27 105 1.8E-27 T 11-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Clos_0804 09219d11e88cd4cb961bae09ef9122ce 211 Pfam PF06130 Phosphate propanoyltransferase 135 199 1.0E-18 T 11-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Clos_1200 f213baa358c8b06584cf6f48a1905ab0 231 SUPERFAMILY SSF52540 6 229 8.78E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1200 f213baa358c8b06584cf6f48a1905ab0 231 Gene3D G3DSA:3.40.50.300 4 231 7.7E-72 T 11-10-2018 Clos_1200 f213baa358c8b06584cf6f48a1905ab0 231 Pfam PF00005 ABC transporter 26 174 1.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1200 f213baa358c8b06584cf6f48a1905ab0 231 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1200 f213baa358c8b06584cf6f48a1905ab0 231 SMART SM00382 35 223 7.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1743 d502ec3e4c0b71632c83a3ddac692a73 125 Pfam PF01042 Endoribonuclease L-PSP 7 123 3.4E-47 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Clos_1743 d502ec3e4c0b71632c83a3ddac692a73 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Clos_1743 d502ec3e4c0b71632c83a3ddac692a73 125 Gene3D G3DSA:3.30.1330.40 1 125 1.6E-55 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Clos_1743 d502ec3e4c0b71632c83a3ddac692a73 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 123 3.9E-56 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Clos_1743 d502ec3e4c0b71632c83a3ddac692a73 125 SUPERFAMILY SSF55298 2 124 4.08E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00028 8 41 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00028 214 247 0.0018 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00028 78 111 1.0E-9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00028 112 145 2.6E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00028 180 213 1.1E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00028 44 77 1.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00028 146 179 0.008 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00028 248 282 87.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 Pfam PF13181 Tetratricopeptide repeat 148 179 6.2E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 Pfam PF13181 Tetratricopeptide repeat 216 246 2.9E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 Pfam PF13181 Tetratricopeptide repeat 45 76 0.0015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 Gene3D G3DSA:1.25.40.10 1 180 2.0E-39 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 Gene3D G3DSA:1.25.40.10 181 312 6.7E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00671 78 109 0.0043 T 11-10-2018 IPR006597 Sel1-like repeat Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00671 112 143 13.0 T 11-10-2018 IPR006597 Sel1-like repeat Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SMART SM00671 180 211 110.0 T 11-10-2018 IPR006597 Sel1-like repeat Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 SUPERFAMILY SSF48452 7 284 4.17E-45 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 Pfam PF00515 Tetratricopeptide repeat 113 143 8.3E-8 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 Pfam PF00515 Tetratricopeptide repeat 181 213 2.2E-8 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Clos_1403 1df2940267c3368ef25f1afaf93cd501 312 Pfam PF00515 Tetratricopeptide repeat 78 110 3.7E-12 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Clos_2358 2fadf7d507a5b4f88927d957930dadfe 99 Pfam PF01910 Thiamine-binding protein 5 96 6.9E-36 T 11-10-2018 IPR002767 Thiamine-binding protein Clos_2358 2fadf7d507a5b4f88927d957930dadfe 99 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 3 99 4.4E-31 T 11-10-2018 IPR002767 Thiamine-binding protein Clos_2358 2fadf7d507a5b4f88927d957930dadfe 99 SUPERFAMILY SSF89957 1 99 4.97E-33 T 11-10-2018 IPR029756 MTH1187/YkoF-like Clos_2358 2fadf7d507a5b4f88927d957930dadfe 99 Gene3D G3DSA:3.30.70.930 1 99 4.7E-37 T 11-10-2018 IPR029756 MTH1187/YkoF-like Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 Gene3D G3DSA:3.40.50.300 480 787 9.7E-121 T 11-10-2018 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 Pfam PF00005 ABC transporter 490 715 6.7E-9 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 Gene3D G3DSA:3.40.50.300 6 89 7.7E-46 T 11-10-2018 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 SUPERFAMILY SSF52540 481 761 7.43E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 Gene3D G3DSA:1.10.8.280 148 265 1.0E-101 T 11-10-2018 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 Gene3D G3DSA:3.40.50.300 357 458 1.0E-101 T 11-10-2018 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 ProSitePatterns PS00211 ABC transporters family signature. 351 365 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 SMART SM00382 494 763 0.38 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 SMART SM00382 23 428 0.83 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 129 780 4.5E-234 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 Gene3D G3DSA:1.20.1580.10 90 117 7.7E-46 T 11-10-2018 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 SUPERFAMILY SSF52540 1 433 1.35E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 Gene3D G3DSA:1.20.1580.10 584 623 9.7E-121 T 11-10-2018 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 Gene3D G3DSA:1.20.1580.10 125 356 1.0E-101 T 11-10-2018 Clos_1323 46e744e072a04fe1ee84b6a2f320759a 799 ProSitePatterns PS00211 ABC transporters family signature. 685 699 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2356 827916a459940e6c62db852dce558837 800 Gene3D G3DSA:3.40.50.300 212 556 1.4E-51 T 11-10-2018 Clos_2356 827916a459940e6c62db852dce558837 800 Gene3D G3DSA:3.40.50.300 572 786 2.7E-57 T 11-10-2018 Clos_2356 827916a459940e6c62db852dce558837 800 Pfam PF06733 DEAD_2 285 407 4.5E-11 T 11-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 Clos_2356 827916a459940e6c62db852dce558837 800 Pfam PF06777 Helical and beta-bridge domain 491 588 2.5E-7 T 11-10-2018 IPR010643 Helical and beta-bridge domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-2564830|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 Clos_2356 827916a459940e6c62db852dce558837 800 Gene3D G3DSA:1.10.30.20 286 345 1.4E-51 T 11-10-2018 Clos_2356 827916a459940e6c62db852dce558837 800 SUPERFAMILY SSF52540 213 749 1.7E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2356 827916a459940e6c62db852dce558837 800 Pfam PF13307 Helicase C-terminal domain 602 768 7.8E-39 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Clos_2356 827916a459940e6c62db852dce558837 800 SMART SM00488 192 431 6.1E-4 T 11-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 Clos_2356 827916a459940e6c62db852dce558837 800 Gene3D G3DSA:1.10.275.40 402 523 1.4E-51 T 11-10-2018 Clos_2356 827916a459940e6c62db852dce558837 800 Pfam PF12705 PD-(D/E)XK nuclease superfamily 65 174 8.2E-5 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Clos_2356 827916a459940e6c62db852dce558837 800 SMART SM00491 619 756 1.4E-17 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 Pfam PF00563 EAL domain 452 686 8.6E-77 T 11-10-2018 IPR001633 EAL domain Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 430 2.8E-45 T 11-10-2018 IPR000160 GGDEF domain Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 SMART SM00267 263 435 3.2E-52 T 11-10-2018 IPR000160 GGDEF domain Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 SUPERFAMILY SSF55073 279 435 7.06E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 270 432 1.2E-43 T 11-10-2018 IPR000160 GGDEF domain Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 SMART SM00091 146 214 1.3E-5 T 11-10-2018 IPR000014 PAS domain Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 SUPERFAMILY SSF141868 451 699 1.26E-89 T 11-10-2018 IPR035919 EAL domain superfamily Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 SMART SM00086 222 263 1.4E-7 T 11-10-2018 IPR001610 PAC motif Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 SUPERFAMILY SSF55785 151 264 3.84E-21 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 SMART SM00052 445 691 7.5E-115 T 11-10-2018 IPR001633 EAL domain Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 Gene3D G3DSA:3.20.20.450 449 700 1.9E-99 T 11-10-2018 IPR035919 EAL domain superfamily Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 Pfam PF08447 PAS fold 176 256 6.9E-21 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 Gene3D G3DSA:3.30.450.20 139 259 5.2E-29 T 11-10-2018 Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 270 3.0E-13 T 11-10-2018 IPR000014 PAS domain Clos_0625 4e55932acf65d336a4f3f4ad8d704da6 703 Gene3D G3DSA:3.30.70.270 268 448 1.4E-53 T 11-10-2018 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 464 39.939 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 Pfam PF09190 DALR domain 353 414 1.0E-18 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 Gene3D G3DSA:3.40.50.620 1 303 3.7E-140 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 SUPERFAMILY SSF52374 2 312 2.82E-104 T 11-10-2018 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 311 5.7E-133 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 Gene3D G3DSA:1.20.120.640 304 463 3.9E-38 T 11-10-2018 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 463 6.1E-185 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 2.0E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 220 241 2.0E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 189 207 2.0E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 2.0E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 SMART SM00840 353 416 3.6E-21 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Clos_0469 3070887a51146bfaa6dce74fcd4287b9 464 SUPERFAMILY SSF47323 340 463 5.49E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 11-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 SUPERFAMILY SSF53182 2 212 4.45E-75 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 PIRSF PIRSF015592 1 211 1.6E-82 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 6.5E-45 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 6.5E-45 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 6.5E-45 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 6.5E-45 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 6.5E-45 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 2 211 1.4E-80 T 11-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 Gene3D G3DSA:3.40.630.20 1 213 4.9E-81 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 Pfam PF01470 Pyroglutamyl peptidase 2 201 5.8E-88 T 11-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 199 38.525 T 11-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 Clos_2359 0fdd226b230a8852b90d8cf7a7564447 213 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 11-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 Clos_1255 fb59a88101773dfae6abafa48315e287 462 Pfam PF03129 Anticodon binding domain 371 458 5.8E-23 T 11-10-2018 IPR004154 Anticodon-binding Clos_1255 fb59a88101773dfae6abafa48315e287 462 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 4 461 52.719 T 11-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 Clos_1255 fb59a88101773dfae6abafa48315e287 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 170 187 1.8E-54 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_1255 fb59a88101773dfae6abafa48315e287 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 149 161 1.8E-54 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_1255 fb59a88101773dfae6abafa48315e287 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 406 425 1.8E-54 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_1255 fb59a88101773dfae6abafa48315e287 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 202 219 1.8E-54 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_1255 fb59a88101773dfae6abafa48315e287 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 26 40 1.8E-54 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_1255 fb59a88101773dfae6abafa48315e287 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 219 229 1.8E-54 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_1255 fb59a88101773dfae6abafa48315e287 462 PRINTS PR01043 Glycyl-tRNA synthetase signature 326 338 1.8E-54 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_1255 fb59a88101773dfae6abafa48315e287 462 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 163 300 5.5E-8 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1255 fb59a88101773dfae6abafa48315e287 462 SUPERFAMILY SSF55681 6 374 1.23E-128 T 11-10-2018 Clos_1255 fb59a88101773dfae6abafa48315e287 462 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 6 244 4.9E-92 T 11-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Clos_1255 fb59a88101773dfae6abafa48315e287 462 SUPERFAMILY SSF52954 358 461 2.27E-34 T 11-10-2018 Clos_1255 fb59a88101773dfae6abafa48315e287 462 Gene3D G3DSA:3.40.50.800 367 461 9.9E-32 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Clos_1491 2ad71012f2d3be7d929daf29668ad810 254 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 56 6.1E-22 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain Clos_1491 2ad71012f2d3be7d929daf29668ad810 254 Pfam PF00691 OmpA family 134 237 7.4E-23 T 11-10-2018 IPR006665 OmpA-like domain Clos_1491 2ad71012f2d3be7d929daf29668ad810 254 SUPERFAMILY SSF103088 123 243 2.62E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily Clos_1491 2ad71012f2d3be7d929daf29668ad810 254 Gene3D G3DSA:3.30.1330.60 84 250 1.1E-51 T 11-10-2018 IPR036737 OmpA-like domain superfamily Clos_0833 2596ac2ee67387768c012ccea4d507ba 269 Pfam PF00561 alpha/beta hydrolase fold 19 250 5.1E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_0833 2596ac2ee67387768c012ccea4d507ba 269 SUPERFAMILY SSF53474 9 266 1.15E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_0833 2596ac2ee67387768c012ccea4d507ba 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 5.5E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_0833 2596ac2ee67387768c012ccea4d507ba 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 5.5E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_0833 2596ac2ee67387768c012ccea4d507ba 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 43 58 5.5E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_0833 2596ac2ee67387768c012ccea4d507ba 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 5.5E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_0833 2596ac2ee67387768c012ccea4d507ba 269 Gene3D G3DSA:3.40.50.1820 1 265 4.2E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_1454 bcd5b8b9d06bb90498bc34c8318f570c 316 Gene3D G3DSA:3.40.366.10 5 285 8.4E-85 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Clos_1454 bcd5b8b9d06bb90498bc34c8318f570c 316 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 289 2.8E-96 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Clos_1454 bcd5b8b9d06bb90498bc34c8318f570c 316 PIRSF PIRSF000446 1 313 9.5E-100 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Clos_1454 bcd5b8b9d06bb90498bc34c8318f570c 316 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 303 2.7E-18 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Clos_1454 bcd5b8b9d06bb90498bc34c8318f570c 316 SUPERFAMILY SSF52151 4 289 2.62E-64 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Clos_1454 bcd5b8b9d06bb90498bc34c8318f570c 316 Pfam PF00698 Acyl transferase domain 6 277 3.1E-25 T 11-10-2018 IPR014043 Acyl transferase Clos_1454 bcd5b8b9d06bb90498bc34c8318f570c 316 SUPERFAMILY SSF55048 129 196 7.59E-18 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Clos_1454 bcd5b8b9d06bb90498bc34c8318f570c 316 Gene3D G3DSA:3.30.70.250 126 196 8.4E-85 T 11-10-2018 Clos_1235 65b2f9c7fd2479bdc0dc47fb0cc53c7f 313 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 309 1.9E-97 T 11-10-2018 Clos_1235 65b2f9c7fd2479bdc0dc47fb0cc53c7f 313 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 310 35.138 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Clos_1235 65b2f9c7fd2479bdc0dc47fb0cc53c7f 313 SUPERFAMILY SSF53335 94 306 1.18E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1235 65b2f9c7fd2479bdc0dc47fb0cc53c7f 313 PIRSF PIRSF000401 1 312 1.6E-105 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Clos_1235 65b2f9c7fd2479bdc0dc47fb0cc53c7f 313 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 303 7.5E-79 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Clos_1235 65b2f9c7fd2479bdc0dc47fb0cc53c7f 313 Gene3D G3DSA:3.40.50.150 116 311 3.8E-59 T 11-10-2018 Clos_0640 bf195dea2628ccf688a7ba7f4b57c9b0 445 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 4 415 1.7E-203 T 11-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative Clos_0640 bf195dea2628ccf688a7ba7f4b57c9b0 445 SUPERFAMILY SSF102114 42 189 1.02E-14 T 11-10-2018 Clos_0640 bf195dea2628ccf688a7ba7f4b57c9b0 445 Gene3D G3DSA:3.20.20.70 49 199 8.1E-10 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0640 bf195dea2628ccf688a7ba7f4b57c9b0 445 SUPERFAMILY SSF47781 301 378 5.78E-11 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_0689 063e57f977dcdfff4f82fcf8c2ca0d51 287 Gene3D G3DSA:2.60.40.1180 9 71 4.1E-112 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Clos_0689 063e57f977dcdfff4f82fcf8c2ca0d51 287 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 55 201 9.9E-16 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Clos_0689 063e57f977dcdfff4f82fcf8c2ca0d51 287 Gene3D G3DSA:3.40.50.150 72 285 4.1E-112 T 11-10-2018 Clos_0689 063e57f977dcdfff4f82fcf8c2ca0d51 287 SUPERFAMILY SSF53335 3 252 2.86E-61 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1055 8366dfd1b5995e28b6ab646b472a3ff5 84 Pfam PF11666 Protein of unknown function (DUF2933) 21 70 7.9E-7 T 11-10-2018 IPR021682 Protein of unknown function DUF2933 Clos_1962 6e1142e482322ba7a7838f9c7d70fa7d 70 Gene3D G3DSA:3.30.110.40 3 70 3.3E-21 T 11-10-2018 IPR036868 TusA-like domain superfamily Clos_1962 6e1142e482322ba7a7838f9c7d70fa7d 70 SUPERFAMILY SSF64307 3 70 1.06E-15 T 11-10-2018 IPR036868 TusA-like domain superfamily Clos_1962 6e1142e482322ba7a7838f9c7d70fa7d 70 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 5 29 - T 11-10-2018 IPR001455 TusA-like domain Clos_1962 6e1142e482322ba7a7838f9c7d70fa7d 70 Pfam PF01206 Sulfurtransferase TusA 4 70 1.5E-18 T 11-10-2018 IPR001455 TusA-like domain Clos_0692 b5fc6fbb3dd9f3613679b94029461071 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Clos_0692 b5fc6fbb3dd9f3613679b94029461071 388 Gene3D G3DSA:3.40.50.1970 1 185 1.3E-55 T 11-10-2018 Clos_0692 b5fc6fbb3dd9f3613679b94029461071 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 378 5.0E-104 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Clos_0692 b5fc6fbb3dd9f3613679b94029461071 388 Gene3D G3DSA:1.20.1090.10 186 386 1.3E-47 T 11-10-2018 Clos_0692 b5fc6fbb3dd9f3613679b94029461071 388 SUPERFAMILY SSF56796 2 386 3.79E-112 T 11-10-2018 Clos_2423 33d724a139646dcc7ecca9f61de8ecb3 126 Pfam PF14276 Domain of unknown function (DUF4363) 7 125 1.8E-33 T 11-10-2018 IPR025373 Protein of unknown function DUF4363 Clos_2107 e469b06fd722bda4b4d13615cc502a42 278 SUPERFAMILY SSF52317 8 223 2.59E-28 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_2107 e469b06fd722bda4b4d13615cc502a42 278 PIRSF PIRSF032067 1 274 6.7E-73 T 11-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 Clos_2107 e469b06fd722bda4b4d13615cc502a42 278 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 9 256 1.3E-98 T 11-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 Clos_2107 e469b06fd722bda4b4d13615cc502a42 278 Pfam PF03575 Peptidase family S51 9 210 4.8E-24 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Clos_2107 e469b06fd722bda4b4d13615cc502a42 278 Gene3D G3DSA:3.40.50.880 5 269 8.4E-78 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_0136 a9be254fa704816b22cf7b012c7a6eb0 147 Pfam PF13673 Acetyltransferase (GNAT) domain 37 145 7.9E-10 T 11-10-2018 IPR000182 GNAT domain Clos_0136 a9be254fa704816b22cf7b012c7a6eb0 147 SUPERFAMILY SSF55729 1 140 5.49E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0136 a9be254fa704816b22cf7b012c7a6eb0 147 Gene3D G3DSA:3.40.630.30 1 142 1.8E-25 T 11-10-2018 Clos_1692 4ef4f177c640f7b267f9dc90cbbd7007 357 Gene3D G3DSA:3.40.630.30 37 200 6.1E-7 T 11-10-2018 Clos_1692 4ef4f177c640f7b267f9dc90cbbd7007 357 SUPERFAMILY SSF55729 101 197 3.87E-9 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1692 4ef4f177c640f7b267f9dc90cbbd7007 357 Pfam PF00583 Acetyltransferase (GNAT) family 108 198 9.7E-6 T 11-10-2018 IPR000182 GNAT domain Clos_1216 e3ee227edcace8f10b9006b189028a52 170 Gene3D G3DSA:1.10.1760.20 1 167 6.0E-16 T 11-10-2018 Clos_1216 e3ee227edcace8f10b9006b189028a52 170 Pfam PF12822 ECF transporter, substrate-specific component 1 154 1.1E-8 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Clos_1958 ea14f065578d93a90343ce8ebf90d1df 165 Gene3D G3DSA:1.20.120.350 14 107 7.2E-11 T 11-10-2018 IPR027359 Voltage-dependent channel domain superfamily Clos_1958 ea14f065578d93a90343ce8ebf90d1df 165 SUPERFAMILY SSF81324 17 157 2.98E-6 T 11-10-2018 Clos_2338 d2b4abcc33000b6358d0565c3052829f 358 Gene3D G3DSA:3.20.20.70 10 358 3.0E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2338 d2b4abcc33000b6358d0565c3052829f 358 SUPERFAMILY SSF51412 10 350 9.62E-58 T 11-10-2018 Clos_2338 d2b4abcc33000b6358d0565c3052829f 358 Pfam PF03060 Nitronate monooxygenase 14 351 3.5E-60 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Clos_2735 e82c1db8a93ab8484903926cde5bfbde 121 Pfam PF13788 Domain of unknown function (DUF4180) 9 118 1.1E-43 T 11-10-2018 IPR025438 Domain of unknown function DUF4180 Clos_0527 8aec96522aa0fe473130c2cce955a775 143 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 2.7E-63 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0527 8aec96522aa0fe473130c2cce955a775 143 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Clos_0527 8aec96522aa0fe473130c2cce955a775 143 PIRSF PIRSF002181 1 143 2.3E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Clos_0527 8aec96522aa0fe473130c2cce955a775 143 Gene3D G3DSA:3.90.1180.10 1 142 1.2E-61 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0527 8aec96522aa0fe473130c2cce955a775 143 Pfam PF00572 Ribosomal protein L13 14 138 4.2E-57 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Clos_0527 8aec96522aa0fe473130c2cce955a775 143 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.809 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Clos_0527 8aec96522aa0fe473130c2cce955a775 143 SUPERFAMILY SSF52161 1 139 1.06E-58 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0731 f85e52b1a19c3651bca22255d514e0b0 256 Gene3D G3DSA:3.90.1580.10 38 254 3.3E-61 T 11-10-2018 Clos_0731 f85e52b1a19c3651bca22255d514e0b0 256 SUPERFAMILY SSF56436 21 253 4.47E-47 T 11-10-2018 IPR016187 C-type lectin fold Clos_0731 f85e52b1a19c3651bca22255d514e0b0 256 Pfam PF03781 Sulfatase-modifying factor enzyme 1 55 252 1.9E-33 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Clos_2122 439a82c919faa919b7b8d446c3d22612 201 Pfam PF00571 CBS domain 15 59 1.2E-5 T 11-10-2018 IPR000644 CBS domain Clos_2122 439a82c919faa919b7b8d446c3d22612 201 Pfam PF00571 CBS domain 68 120 0.0039 T 11-10-2018 IPR000644 CBS domain Clos_2122 439a82c919faa919b7b8d446c3d22612 201 SUPERFAMILY SSF55021 132 198 5.0E-7 T 11-10-2018 Clos_2122 439a82c919faa919b7b8d446c3d22612 201 Gene3D G3DSA:3.10.580.10 2 133 1.5E-26 T 11-10-2018 Clos_2122 439a82c919faa919b7b8d446c3d22612 201 SMART SM00116 75 123 19.0 T 11-10-2018 IPR000644 CBS domain Clos_2122 439a82c919faa919b7b8d446c3d22612 201 SMART SM00116 12 59 2.2E-4 T 11-10-2018 IPR000644 CBS domain Clos_2122 439a82c919faa919b7b8d446c3d22612 201 SUPERFAMILY SSF54631 6 122 1.46E-18 T 11-10-2018 Clos_2122 439a82c919faa919b7b8d446c3d22612 201 Gene3D G3DSA:3.30.70.260 134 200 7.8E-6 T 11-10-2018 Clos_1083 c3cb40a12699f770fef318f9bdd8f971 154 Pfam PF01252 Signal peptidase (SPase) II 6 143 4.0E-37 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1083 c3cb40a12699f770fef318f9bdd8f971 154 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 149 16.057 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1083 c3cb40a12699f770fef318f9bdd8f971 154 ProSitePatterns PS00855 Signal peptidases II signature. 93 105 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1083 c3cb40a12699f770fef318f9bdd8f971 154 TIGRFAM TIGR00077 lspA: signal peptidase II 2 147 3.1E-35 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1083 c3cb40a12699f770fef318f9bdd8f971 154 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 2.3E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1083 c3cb40a12699f770fef318f9bdd8f971 154 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 124 140 2.3E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_1083 c3cb40a12699f770fef318f9bdd8f971 154 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 90 105 2.3E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Clos_0106 65137260a0d3592df5762aba521fe790 174 Gene3D G3DSA:3.40.630.30 2 158 2.1E-18 T 11-10-2018 Clos_0106 65137260a0d3592df5762aba521fe790 174 Pfam PF00583 Acetyltransferase (GNAT) family 46 131 9.7E-10 T 11-10-2018 IPR000182 GNAT domain Clos_0106 65137260a0d3592df5762aba521fe790 174 SUPERFAMILY SSF55729 19 155 4.8E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1957 5b1e53bdf8c878be13355a65ff0d86f3 226 Gene3D G3DSA:3.20.20.70 65 225 2.8E-11 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1957 5b1e53bdf8c878be13355a65ff0d86f3 226 SUPERFAMILY SSF51412 58 199 4.49E-13 T 11-10-2018 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 PIRSF PIRSF001563 1 433 1.3E-148 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 426 2.5E-121 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 SUPERFAMILY SSF53623 1 296 8.96E-95 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 296 371 4.8E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 SUPERFAMILY SSF53244 298 429 7.69E-30 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 Gene3D G3DSA:3.90.190.20 298 433 1.4E-37 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 Pfam PF08245 Mur ligase middle domain 44 270 6.9E-17 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 140 155 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 42 65 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Clos_2028 9a69ac6b72ff3a24e40b6ed2185503b2 434 Gene3D G3DSA:3.40.1190.10 1 297 2.8E-103 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2499 e16b3e0efd28ccd4bb81a684a639476f 267 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 241 262 2.4E-10 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Clos_2499 e16b3e0efd28ccd4bb81a684a639476f 267 Pfam PF00005 ABC transporter 20 190 8.1E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2499 e16b3e0efd28ccd4bb81a684a639476f 267 Gene3D G3DSA:3.40.50.300 1 263 2.6E-58 T 11-10-2018 Clos_2499 e16b3e0efd28ccd4bb81a684a639476f 267 SUPERFAMILY SSF52540 3 262 1.84E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2499 e16b3e0efd28ccd4bb81a684a639476f 267 SMART SM00382 28 240 2.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1208 388c9971efbb620e3b5c15d48f812618 189 Pfam PF01464 Transglycosylase SLT domain 44 154 1.8E-30 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Clos_1208 388c9971efbb620e3b5c15d48f812618 189 Gene3D G3DSA:1.10.530.10 35 189 2.1E-49 T 11-10-2018 Clos_1208 388c9971efbb620e3b5c15d48f812618 189 SUPERFAMILY SSF53955 24 185 3.56E-42 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Clos_1208 388c9971efbb620e3b5c15d48f812618 189 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 62 90 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Clos_0708 c6d55e4497bb35bd37ee41021f3fe90d 288 SUPERFAMILY SSF52540 3 223 4.18E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0708 c6d55e4497bb35bd37ee41021f3fe90d 288 Gene3D G3DSA:3.40.50.300 1 232 7.7E-50 T 11-10-2018 Clos_0708 c6d55e4497bb35bd37ee41021f3fe90d 288 Pfam PF00005 ABC transporter 19 158 7.6E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0708 c6d55e4497bb35bd37ee41021f3fe90d 288 SMART SM00382 28 207 4.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0708 c6d55e4497bb35bd37ee41021f3fe90d 288 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2759 b191a061fcb18ac81e735418e789347f 315 SUPERFAMILY SSF55729 32 293 1.09E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2759 b191a061fcb18ac81e735418e789347f 315 Pfam PF13673 Acetyltransferase (GNAT) domain 204 289 1.4E-10 T 11-10-2018 IPR000182 GNAT domain Clos_2759 b191a061fcb18ac81e735418e789347f 315 Gene3D G3DSA:3.40.630.30 21 305 1.1E-29 T 11-10-2018 Clos_2867 aed99b306022fc5f71d05e9d2123177d 291 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 33 211 1.5E-55 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Clos_2867 aed99b306022fc5f71d05e9d2123177d 291 SUPERFAMILY SSF110849 36 127 1.41E-27 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Clos_2867 aed99b306022fc5f71d05e9d2123177d 291 SMART SM00470 36 125 1.2E-31 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Clos_2867 aed99b306022fc5f71d05e9d2123177d 291 Pfam PF02195 ParB-like nuclease domain 37 124 3.2E-25 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Clos_2867 aed99b306022fc5f71d05e9d2123177d 291 Gene3D G3DSA:1.10.10.2830 112 226 6.0E-35 T 11-10-2018 Clos_2867 aed99b306022fc5f71d05e9d2123177d 291 SUPERFAMILY SSF109709 117 228 8.89E-35 T 11-10-2018 Clos_2867 aed99b306022fc5f71d05e9d2123177d 291 Gene3D G3DSA:3.90.1530.30 49 110 2.5E-26 T 11-10-2018 Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 PIRSF PIRSF001467 1 162 2.7E-41 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 158 4.7E-48 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 41 58 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 58 1.4E-20 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 20 35 1.4E-20 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 118 1.4E-20 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 91 106 1.4E-20 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 1.4E-20 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 Gene3D G3DSA:2.40.100.10 1 162 2.9E-57 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Clos_0898 f7b0b07425bf4e1e1a9ced7e0a7e9761 172 SUPERFAMILY SSF50891 4 160 5.99E-53 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 PRINTS PR00173 Glutamate-aspartate symporter signature 183 202 7.4E-57 T 11-10-2018 Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 PRINTS PR00173 Glutamate-aspartate symporter signature 347 367 7.4E-57 T 11-10-2018 Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 PRINTS PR00173 Glutamate-aspartate symporter signature 320 339 7.4E-57 T 11-10-2018 Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 7.4E-57 T 11-10-2018 Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 PRINTS PR00173 Glutamate-aspartate symporter signature 42 62 7.4E-57 T 11-10-2018 Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 PRINTS PR00173 Glutamate-aspartate symporter signature 285 311 7.4E-57 T 11-10-2018 Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 PRINTS PR00173 Glutamate-aspartate symporter signature 72 97 7.4E-57 T 11-10-2018 Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 Pfam PF00375 Sodium:dicarboxylate symporter family 3 392 7.6E-136 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 288 311 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 Gene3D G3DSA:1.10.3860.10 1 404 8.9E-147 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Clos_0546 b20ac524ed185fb226481ba2f5fa6682 405 SUPERFAMILY SSF118215 3 393 1.11E-124 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 SMART SM00267 402 584 7.5E-9 T 11-10-2018 IPR000160 GGDEF domain Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 SUPERFAMILY SSF55073 418 580 5.18E-21 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 SMART SM00052 8 250 1.1E-28 T 11-10-2018 IPR001633 EAL domain Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 Gene3D G3DSA:3.30.70.270 416 584 1.4E-21 T 11-10-2018 Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 510 6.8E-19 T 11-10-2018 IPR000160 GGDEF domain Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 Gene3D G3DSA:3.10.580.10 278 415 1.8E-11 T 11-10-2018 Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 SUPERFAMILY SSF141868 14 246 7.72E-56 T 11-10-2018 IPR035919 EAL domain superfamily Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 Pfam PF00990 Diguanylate cyclase, GGDEF domain 418 516 1.3E-16 T 11-10-2018 IPR000160 GGDEF domain Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 SUPERFAMILY SSF54631 280 402 2.17E-13 T 11-10-2018 Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 Gene3D G3DSA:3.20.20.450 12 238 7.8E-57 T 11-10-2018 IPR035919 EAL domain superfamily Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 Pfam PF00563 EAL domain 16 245 1.3E-44 T 11-10-2018 IPR001633 EAL domain Clos_0999 76b834330d4cb89e0f2269ef2b0ecc78 585 Pfam PF00571 CBS domain 348 402 1.9E-5 T 11-10-2018 IPR000644 CBS domain Clos_0436 6687348647384293a029d290e5db0c52 559 SUPERFAMILY SSF51703 8 553 7.06E-219 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Clos_0436 6687348647384293a029d290e5db0c52 559 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 36 556 4.3E-255 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Clos_0436 6687348647384293a029d290e5db0c52 559 Gene3D G3DSA:3.20.20.240 1 559 1.0E-257 T 11-10-2018 Clos_0436 6687348647384293a029d290e5db0c52 559 Pfam PF01642 Methylmalonyl-CoA mutase 38 551 5.9E-232 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Clos_2232 b2b53e9bd4085fb5b80e51fa934d0926 269 SUPERFAMILY SSF53098 100 261 4.25E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_2232 b2b53e9bd4085fb5b80e51fa934d0926 269 Pfam PF13276 HTH-like domain 27 80 1.7E-14 T 11-10-2018 IPR025948 HTH-like domain Clos_2232 b2b53e9bd4085fb5b80e51fa934d0926 269 Pfam PF00665 Integrase core domain 107 222 1.2E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Clos_2232 b2b53e9bd4085fb5b80e51fa934d0926 269 Gene3D G3DSA:3.30.420.10 103 258 7.4E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_1987 b2b53e9bd4085fb5b80e51fa934d0926 269 SUPERFAMILY SSF53098 100 261 4.25E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_1987 b2b53e9bd4085fb5b80e51fa934d0926 269 Pfam PF13276 HTH-like domain 27 80 1.7E-14 T 11-10-2018 IPR025948 HTH-like domain Clos_1987 b2b53e9bd4085fb5b80e51fa934d0926 269 Pfam PF00665 Integrase core domain 107 222 1.2E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Clos_1987 b2b53e9bd4085fb5b80e51fa934d0926 269 Gene3D G3DSA:3.30.420.10 103 258 7.4E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_1893 b2b53e9bd4085fb5b80e51fa934d0926 269 SUPERFAMILY SSF53098 100 261 4.25E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_1893 b2b53e9bd4085fb5b80e51fa934d0926 269 Pfam PF13276 HTH-like domain 27 80 1.7E-14 T 11-10-2018 IPR025948 HTH-like domain Clos_1893 b2b53e9bd4085fb5b80e51fa934d0926 269 Pfam PF00665 Integrase core domain 107 222 1.2E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Clos_1893 b2b53e9bd4085fb5b80e51fa934d0926 269 Gene3D G3DSA:3.30.420.10 103 258 7.4E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_0319 161472cad89df100e2b50bf0ab53380f 342 SUPERFAMILY SSF81345 12 333 7.59E-87 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0319 161472cad89df100e2b50bf0ab53380f 342 Pfam PF01032 FecCD transport family 28 333 7.4E-99 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_0319 161472cad89df100e2b50bf0ab53380f 342 Gene3D G3DSA:1.10.3470.10 13 339 1.6E-104 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 Hamap MF_01974 Methionine aminopeptidase [map]. 44 291 33.111 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 Pfam PF02810 SEC-C motif 7 24 4.1E-10 T 11-10-2018 IPR004027 SEC-C motif Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 Gene3D G3DSA:3.90.230.10 15 291 9.9E-87 T 11-10-2018 Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 Pfam PF00557 Metallopeptidase family M24 54 282 4.5E-46 T 11-10-2018 IPR000994 Peptidase M24 Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 SUPERFAMILY SSF103642 7 26 1.8E-6 T 11-10-2018 Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 SUPERFAMILY SSF55920 45 289 9.42E-70 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 46 290 2.8E-76 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 132 148 2.4E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 202 214 2.4E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 233 245 2.4E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_2743 6f58aea05dd877fbb7406daed5f98dc9 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 109 122 2.4E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_1321 84a3b63e23599c661110f7317cad1e38 372 SUPERFAMILY SSF69572 99 369 1.44E-47 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Clos_1321 84a3b63e23599c661110f7317cad1e38 372 Gene3D G3DSA:3.40.50.720 105 369 1.5E-57 T 11-10-2018 Clos_1321 84a3b63e23599c661110f7317cad1e38 372 Pfam PF00899 ThiF family 107 354 1.9E-31 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Clos_0722 aea5fb7ebfb54620e2dffdeee9d42070 280 Gene3D G3DSA:3.40.190.10 35 262 2.6E-47 T 11-10-2018 Clos_0722 aea5fb7ebfb54620e2dffdeee9d42070 280 Gene3D G3DSA:3.40.190.10 136 235 2.6E-47 T 11-10-2018 Clos_0722 aea5fb7ebfb54620e2dffdeee9d42070 280 SMART SM00062 36 275 2.7E-29 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_0722 aea5fb7ebfb54620e2dffdeee9d42070 280 SUPERFAMILY SSF53850 4 267 1.61E-45 T 11-10-2018 Clos_0722 aea5fb7ebfb54620e2dffdeee9d42070 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 70 270 6.9E-35 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Clos_2199 83f210e807b78bca68fa47f5b5c7d575 510 Gene3D G3DSA:3.30.70.270 346 510 5.7E-45 T 11-10-2018 Clos_2199 83f210e807b78bca68fa47f5b5c7d575 510 SUPERFAMILY SSF55073 356 509 3.53E-40 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_2199 83f210e807b78bca68fa47f5b5c7d575 510 Gene3D G3DSA:3.30.450.20 169 302 7.3E-24 T 11-10-2018 Clos_2199 83f210e807b78bca68fa47f5b5c7d575 510 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 507 1.9E-38 T 11-10-2018 IPR000160 GGDEF domain Clos_2199 83f210e807b78bca68fa47f5b5c7d575 510 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 506 5.2E-39 T 11-10-2018 IPR000160 GGDEF domain Clos_2199 83f210e807b78bca68fa47f5b5c7d575 510 Pfam PF08269 Cache domain 164 295 3.3E-17 T 11-10-2018 IPR004010 Double Cache domain 2 Clos_2199 83f210e807b78bca68fa47f5b5c7d575 510 SMART SM00267 340 510 2.3E-41 T 11-10-2018 IPR000160 GGDEF domain Clos_1542 d42bb0288778b3d7138424b4b499791c 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 2 322 5.7E-177 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 Hamap MF_00268 Protein RecA [recA]. 3 327 53.362 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 Gene3D G3DSA:3.30.250.10 266 324 3.1E-26 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Clos_1542 d42bb0288778b3d7138424b4b499791c 352 PRINTS PR00142 RecA protein signature 163 192 9.4E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 PRINTS PR00142 RecA protein signature 91 120 9.4E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 PRINTS PR00142 RecA protein signature 295 312 9.4E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 PRINTS PR00142 RecA protein signature 241 270 9.4E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 PRINTS PR00142 RecA protein signature 125 154 9.4E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 PRINTS PR00142 RecA protein signature 208 236 9.4E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 SMART SM00382 55 226 3.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1542 d42bb0288778b3d7138424b4b499791c 352 Gene3D G3DSA:3.40.50.300 24 265 5.8E-82 T 11-10-2018 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 SUPERFAMILY SSF52540 4 265 8.76E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1542 d42bb0288778b3d7138424b4b499791c 352 SUPERFAMILY SSF54752 266 324 9.29E-21 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Clos_1542 d42bb0288778b3d7138424b4b499791c 352 ProSitePatterns PS00321 recA signature. 211 219 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Clos_1542 d42bb0288778b3d7138424b4b499791c 352 Pfam PF00154 recA bacterial DNA recombination protein 5 266 4.9E-147 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Clos_1594 3d4f40f3886e24dbd632715ebfd666d5 214 Pfam PF01944 Stage II sporulation protein M 24 203 1.0E-23 T 11-10-2018 IPR002798 Stage II sporulation protein M-like Clos_1594 3d4f40f3886e24dbd632715ebfd666d5 214 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 8 208 7.8E-48 T 11-10-2018 IPR014196 Stage II sporulation protein M Clos_1594 3d4f40f3886e24dbd632715ebfd666d5 214 PIRSF PIRSF038973 1 214 1.2E-60 T 11-10-2018 IPR014196 Stage II sporulation protein M Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 SMART SM00387 188 295 2.7E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 PRINTS PR01780 Lantibiotic regulatory protein signature 85 101 3.6E-6 T 11-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 PRINTS PR01780 Lantibiotic regulatory protein signature 246 261 3.6E-6 T 11-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 Pfam PF00512 His Kinase A (phospho-acceptor) domain 77 141 1.1E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 SUPERFAMILY SSF47384 70 142 3.73E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 Gene3D G3DSA:3.30.565.10 149 291 2.1E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 SUPERFAMILY SSF55874 132 278 6.94E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 SMART SM00388 76 142 1.0E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 189 279 1.1E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0124 b9d4133cd8a0aff84e4dbe56f0fb6b7d 307 Gene3D G3DSA:1.10.287.130 17 138 4.5E-19 T 11-10-2018 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 200 395 1.0E-27 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 SUPERFAMILY SSF56954 96 195 5.62E-7 T 11-10-2018 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 SUPERFAMILY SSF111369 180 277 1.7E-6 T 11-10-2018 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 Gene3D G3DSA:2.40.50.100 61 258 2.8E-56 T 11-10-2018 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 Gene3D G3DSA:2.40.420.20 46 394 2.8E-56 T 11-10-2018 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 SUPERFAMILY SSF111369 49 130 5.23E-9 T 11-10-2018 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 Gene3D G3DSA:1.10.287.470 95 223 2.8E-56 T 11-10-2018 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 Pfam PF13533 Biotin-lipoyl like 73 109 6.5E-11 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 Pfam PF13437 HlyD family secretion protein 224 324 1.1E-13 T 11-10-2018 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 Gene3D G3DSA:2.40.30.170 50 334 2.8E-56 T 11-10-2018 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 73 93 2.7E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Clos_1199 8f9611527380c114c5c3d28fc6e25f19 412 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 333 356 2.7E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Clos_0753 bf8dde48f5e30b6b71a4d98af1267dc3 421 Gene3D G3DSA:1.20.1250.20 1 406 1.7E-33 T 11-10-2018 Clos_0753 bf8dde48f5e30b6b71a4d98af1267dc3 421 Pfam PF07690 Major Facilitator Superfamily 7 350 1.5E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Clos_0753 bf8dde48f5e30b6b71a4d98af1267dc3 421 SUPERFAMILY SSF103473 4 409 7.72E-42 T 11-10-2018 IPR036259 MFS transporter superfamily Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 SMART SM00257 558 602 5.1E-14 T 11-10-2018 IPR018392 LysM domain Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 Gene3D G3DSA:3.60.21.10 53 340 1.5E-86 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 Pfam PF00149 Calcineurin-like phosphoesterase 61 267 1.6E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 495 1.9E-48 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 SUPERFAMILY SSF54106 557 602 1.83E-11 T 11-10-2018 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 Pfam PF01476 LysM domain 559 602 1.1E-12 T 11-10-2018 IPR018392 LysM domain Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 SUPERFAMILY SSF55816 339 532 3.27E-64 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 PRINTS PR01607 Apyrase family signature 226 243 5.1E-31 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 PRINTS PR01607 Apyrase family signature 58 76 5.1E-31 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 PRINTS PR01607 Apyrase family signature 396 419 5.1E-31 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 PRINTS PR01607 Apyrase family signature 469 488 5.1E-31 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 PRINTS PR01607 Apyrase family signature 250 273 5.1E-31 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 PRINTS PR01607 Apyrase family signature 278 298 5.1E-31 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 Gene3D G3DSA:3.90.780.10 342 533 2.3E-68 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 SUPERFAMILY SSF56300 57 340 1.05E-81 T 11-10-2018 Clos_0920 37d198277e82d2ba1039ce49d6147f5f 604 Gene3D G3DSA:3.10.350.10 547 604 5.3E-17 T 11-10-2018 IPR036779 LysM domain superfamily Clos_2071 3cbcc9a9ec86c88c433172b62e6bfa47 449 Pfam PF14620 YpeB sporulation 13 372 2.5E-117 T 11-10-2018 IPR014239 Spore germination YpeB GO:0009847 Clos_2071 3cbcc9a9ec86c88c433172b62e6bfa47 449 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 6 437 3.7E-112 T 11-10-2018 IPR014239 Spore germination YpeB GO:0009847 Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 202 406 2.6E-20 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 SUPERFAMILY SSF52540 137 414 1.89E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 SMART SM00382 213 398 2.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 SUPERFAMILY SSF50249 99 171 4.2E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 Gene3D G3DSA:3.40.50.300 177 460 1.6E-124 T 11-10-2018 Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 Pfam PF07498 Rho termination factor, N-terminal domain 5 44 1.6E-10 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 Pfam PF07497 Rho termination factor, RNA-binding domain 100 171 2.3E-29 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 SMART SM00357 100 164 2.5E-15 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 SMART SM00959 5 46 2.4E-9 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 462 196.219 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 TIGRFAM TIGR00767 rho: transcription termination factor Rho 3 460 1.5E-186 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Clos_2591 c1a1322c99b29d840fadfa2534f52320 463 SUPERFAMILY SSF68912 3 43 6.67E-7 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Clos_2760 d77fe6513228792bcf3b8212c8aa558f 256 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 187 254 6.3E-26 T 11-10-2018 IPR018656 Domain of unknown function DUF2087 Clos_2760 d77fe6513228792bcf3b8212c8aa558f 256 Pfam PF00196 Bacterial regulatory proteins, luxR family 81 122 3.2E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_2760 d77fe6513228792bcf3b8212c8aa558f 256 SUPERFAMILY SSF46894 69 123 7.48E-11 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_2760 d77fe6513228792bcf3b8212c8aa558f 256 Gene3D G3DSA:1.10.10.10 74 130 1.4E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2760 d77fe6513228792bcf3b8212c8aa558f 256 SMART SM00421 78 134 1.7E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_2760 d77fe6513228792bcf3b8212c8aa558f 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 111 123 1.3E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_2760 d77fe6513228792bcf3b8212c8aa558f 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 81 95 1.3E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_2760 d77fe6513228792bcf3b8212c8aa558f 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 95 111 1.3E-7 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 SUPERFAMILY SSF64182 3 532 8.06E-73 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 Gene3D G3DSA:3.10.310.20 417 537 1.5E-35 T 11-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 Gene3D G3DSA:3.10.580.10 67 283 1.0E-69 T 11-10-2018 Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 Pfam PF01368 DHH family 3 373 1.9E-28 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 Pfam PF00571 CBS domain 242 291 0.0047 T 11-10-2018 IPR000644 CBS domain Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 Pfam PF07085 DRTGG domain 135 235 1.6E-23 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 Pfam PF02833 DHHA2 domain 410 531 3.9E-19 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 Gene3D G3DSA:3.40.1390.20 124 236 1.0E-69 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 SMART SM01131 408 533 4.3E-43 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 Gene3D G3DSA:3.90.1640.10 284 416 2.5E-49 T 11-10-2018 Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 SUPERFAMILY SSF75138 131 243 2.75E-22 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Clos_1959 adefc5cfcbd9fd42ec5805cfc0c18122 537 SUPERFAMILY SSF54631 66 292 2.02E-13 T 11-10-2018 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 Gene3D G3DSA:3.90.1170.30 331 420 2.0E-151 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 7.9E-46 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 SUPERFAMILY SSF54680 333 433 2.75E-29 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 SMART SM00941 345 419 2.2E-32 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 418 5.9E-177 T 11-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 Gene3D G3DSA:3.40.1030.10 77 330 2.0E-151 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 5.9E-22 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 PIRSF PIRSF000478 1 434 5.6E-167 T 11-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 SUPERFAMILY SSF52418 69 328 9.16E-95 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 Gene3D G3DSA:1.20.970.10 1 67 2.9E-29 T 11-10-2018 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 SUPERFAMILY SSF47648 1 69 9.55E-22 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 3.2E-24 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_1589 0b7f67b3cd8f6095d72022f75b3d3202 441 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 11-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Clos_0540 0a76b1831c0ae645df6b1f83a9485409 209 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 141 164 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Clos_0540 0a76b1831c0ae645df6b1f83a9485409 209 Gene3D G3DSA:3.40.50.170 1 209 6.3E-71 T 11-10-2018 Clos_0540 0a76b1831c0ae645df6b1f83a9485409 209 Pfam PF00551 Formyl transferase 5 189 2.8E-56 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Clos_0540 0a76b1831c0ae645df6b1f83a9485409 209 SUPERFAMILY SSF53328 4 205 5.63E-57 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Clos_0540 0a76b1831c0ae645df6b1f83a9485409 209 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 5 199 2.3E-62 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Clos_0540 0a76b1831c0ae645df6b1f83a9485409 209 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 195 30.121 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Clos_0093 328b74d8ed4b840f4bd1034505448727 333 SUPERFAMILY SSF52402 7 203 3.63E-59 T 11-10-2018 Clos_0093 328b74d8ed4b840f4bd1034505448727 333 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 209 292 7.4E-37 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Clos_0093 328b74d8ed4b840f4bd1034505448727 333 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 273 299 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Clos_0093 328b74d8ed4b840f4bd1034505448727 333 SUPERFAMILY SSF52467 209 329 7.27E-47 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Clos_0093 328b74d8ed4b840f4bd1034505448727 333 Pfam PF01012 Electron transfer flavoprotein domain 9 187 1.7E-49 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0093 328b74d8ed4b840f4bd1034505448727 333 SMART SM00893 9 198 2.9E-56 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0093 328b74d8ed4b840f4bd1034505448727 333 Gene3D G3DSA:3.40.50.1220 207 333 7.3E-56 T 11-10-2018 Clos_0093 328b74d8ed4b840f4bd1034505448727 333 Gene3D G3DSA:3.40.50.620 5 206 1.2E-84 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0093 328b74d8ed4b840f4bd1034505448727 333 PIRSF PIRSF000089 6 333 1.2E-121 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Clos_1754 7c130170f87f832d1cdd52c964240bd0 501 Pfam PF00575 S1 RNA binding domain 37 107 6.2E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_1754 7c130170f87f832d1cdd52c964240bd0 501 Pfam PF10150 Ribonuclease E/G family 121 390 1.9E-104 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Clos_1754 7c130170f87f832d1cdd52c964240bd0 501 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 418 5.3E-150 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Clos_1754 7c130170f87f832d1cdd52c964240bd0 501 Gene3D G3DSA:2.40.50.140 29 125 5.0E-34 T 11-10-2018 Clos_1754 7c130170f87f832d1cdd52c964240bd0 501 SMART SM00316 36 119 4.2E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_1754 7c130170f87f832d1cdd52c964240bd0 501 SUPERFAMILY SSF50249 38 125 2.66E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0472 fcc088a6952c7e644e3d654dec64b956 260 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 5 236 28.626 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Clos_0472 fcc088a6952c7e644e3d654dec64b956 260 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 6 226 5.5E-55 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Clos_0472 fcc088a6952c7e644e3d654dec64b956 260 Pfam PF02511 Thymidylate synthase complementing protein 9 223 1.8E-68 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Clos_0472 fcc088a6952c7e644e3d654dec64b956 260 Gene3D G3DSA:3.30.1360.170 7 228 7.4E-68 T 11-10-2018 Clos_0472 fcc088a6952c7e644e3d654dec64b956 260 SUPERFAMILY SSF69796 3 237 4.32E-61 T 11-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Clos_1896 fa732b725fc470be533bb7acf0b6e029 116 Pfam PF02635 DsrE/DsrF-like family 39 115 4.7E-10 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Clos_1896 fa732b725fc470be533bb7acf0b6e029 116 Gene3D G3DSA:3.40.1260.10 1 116 1.3E-33 T 11-10-2018 IPR027396 DsrEFH-like Clos_1896 fa732b725fc470be533bb7acf0b6e029 116 SUPERFAMILY SSF75169 4 116 3.14E-23 T 11-10-2018 IPR027396 DsrEFH-like Clos_2690 258ceaad1e508b97688a2b5b685fdc5f 599 Gene3D G3DSA:3.50.50.60 149 595 4.0E-146 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2690 258ceaad1e508b97688a2b5b685fdc5f 599 Pfam PF04205 FMN-binding domain 50 122 7.4E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2690 258ceaad1e508b97688a2b5b685fdc5f 599 SUPERFAMILY SSF51905 144 597 8.83E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2690 258ceaad1e508b97688a2b5b685fdc5f 599 Pfam PF00890 FAD binding domain 150 581 7.7E-82 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_2690 258ceaad1e508b97688a2b5b685fdc5f 599 Gene3D G3DSA:3.90.1010.20 73 140 2.0E-5 T 11-10-2018 Clos_2690 258ceaad1e508b97688a2b5b685fdc5f 599 SUPERFAMILY SSF56425 407 541 1.4E-30 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_2690 258ceaad1e508b97688a2b5b685fdc5f 599 Gene3D G3DSA:3.90.700.10 386 537 4.0E-146 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_2690 258ceaad1e508b97688a2b5b685fdc5f 599 SMART SM00900 50 124 2.2E-20 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2690 258ceaad1e508b97688a2b5b685fdc5f 599 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 150 593 8.9E-124 T 11-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 Clos_0764 4cf36bd774f7da077fa320e8414a1317 213 SUPERFAMILY SSF51161 44 201 6.52E-47 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Clos_0764 4cf36bd774f7da077fa320e8414a1317 213 Gene3D G3DSA:2.160.10.10 1 210 8.1E-74 T 11-10-2018 Clos_0764 4cf36bd774f7da077fa320e8414a1317 213 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 149 6.4E-12 T 11-10-2018 IPR001451 Hexapeptide repeat Clos_0764 4cf36bd774f7da077fa320e8414a1317 213 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 125 153 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Clos_0074 19403b1532d43df37092b557a0179484 397 Gene3D G3DSA:3.30.450.20 258 393 9.1E-44 T 11-10-2018 Clos_0074 19403b1532d43df37092b557a0179484 397 Pfam PF13596 PAS domain 279 382 2.0E-31 T 11-10-2018 Clos_0074 19403b1532d43df37092b557a0179484 397 SUPERFAMILY SSF55785 275 373 2.56E-7 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0074 19403b1532d43df37092b557a0179484 397 Pfam PF01814 Hemerythrin HHE cation binding domain 94 213 9.1E-7 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Clos_0074 19403b1532d43df37092b557a0179484 397 Gene3D G3DSA:1.20.120.520 96 231 5.8E-7 T 11-10-2018 Clos_0147 f6671f042aa3e81e2b3de381d6f5d42d 412 Pfam PF08984 Domain of unknown function (DUF1858) 7 61 5.7E-13 T 11-10-2018 IPR015077 Domain of unknown function DUF1858 Clos_0147 f6671f042aa3e81e2b3de381d6f5d42d 412 Pfam PF13343 Bacterial extracellular solute-binding protein 150 393 8.3E-80 T 11-10-2018 Clos_0147 f6671f042aa3e81e2b3de381d6f5d42d 412 Gene3D G3DSA:1.10.3910.10 1 69 4.3E-13 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Clos_0147 f6671f042aa3e81e2b3de381d6f5d42d 412 Gene3D G3DSA:3.40.190.10 160 369 3.0E-20 T 11-10-2018 Clos_0147 f6671f042aa3e81e2b3de381d6f5d42d 412 SUPERFAMILY SSF53850 134 396 5.69E-26 T 11-10-2018 Clos_0147 f6671f042aa3e81e2b3de381d6f5d42d 412 SUPERFAMILY SSF140683 1 72 7.85E-17 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Clos_0147 f6671f042aa3e81e2b3de381d6f5d42d 412 Gene3D G3DSA:3.40.190.10 214 326 3.0E-20 T 11-10-2018 Clos_0349 5da17c7afac2c4e9d483bb3aeff14bd0 345 Gene3D G3DSA:3.40.50.10740 2 167 4.4E-61 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal Clos_0349 5da17c7afac2c4e9d483bb3aeff14bd0 345 Pfam PF02016 LD-carboxypeptidase 16 330 1.2E-71 T 11-10-2018 IPR003507 Peptidase family S66 Clos_0349 5da17c7afac2c4e9d483bb3aeff14bd0 345 SUPERFAMILY SSF141986 185 334 2.62E-27 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Clos_0349 5da17c7afac2c4e9d483bb3aeff14bd0 345 Gene3D G3DSA:3.50.30.60 168 345 7.1E-60 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Clos_0349 5da17c7afac2c4e9d483bb3aeff14bd0 345 SUPERFAMILY SSF52317 3 169 4.53E-44 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_0349 5da17c7afac2c4e9d483bb3aeff14bd0 345 PIRSF PIRSF028757 4 344 1.0E-68 T 11-10-2018 IPR003507 Peptidase family S66 Clos_1772 874979cdb9bb131ee7188ab5e99dadf2 199 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 5 191 4.5E-79 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Clos_1772 874979cdb9bb131ee7188ab5e99dadf2 199 PIRSF PIRSF006102 1 199 1.8E-73 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Clos_1772 874979cdb9bb131ee7188ab5e99dadf2 199 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 3 196 26.8 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Clos_1772 874979cdb9bb131ee7188ab5e99dadf2 199 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 185 4.0E-68 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Clos_1881 186f8c3070060a7ca6f29bea84fd0933 118 PIRSF PIRSF002070 1 117 1.1E-29 T 11-10-2018 Clos_1881 186f8c3070060a7ca6f29bea84fd0933 118 SUPERFAMILY SSF50249 1 114 8.57E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1881 186f8c3070060a7ca6f29bea84fd0933 118 Gene3D G3DSA:2.40.50.140 1 112 3.5E-33 T 11-10-2018 Clos_1881 186f8c3070060a7ca6f29bea84fd0933 118 Pfam PF00436 Single-strand binding protein family 1 100 6.1E-28 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Clos_1881 186f8c3070060a7ca6f29bea84fd0933 118 Hamap MF_00984 Single-stranded DNA-binding protein. 1 107 26.347 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Clos_1881 186f8c3070060a7ca6f29bea84fd0933 118 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 107 2.1E-29 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Clos_2550 52ab9855b7efafa69b2756f920990ef0 357 Pfam PF00460 Flagella basal body rod protein 5 35 3.0E-10 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Clos_2550 52ab9855b7efafa69b2756f920990ef0 357 SUPERFAMILY SSF117143 196 315 1.27E-23 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clos_2550 52ab9855b7efafa69b2756f920990ef0 357 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 281 352 1.7E-19 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clos_2550 52ab9855b7efafa69b2756f920990ef0 357 SUPERFAMILY SSF117143 82 153 3.53E-6 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Clos_2550 52ab9855b7efafa69b2756f920990ef0 357 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 171 239 2.0E-22 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Clos_2525 96f0d28360c1bc0e2f02a30e0a2191c0 228 Gene3D G3DSA:3.40.50.2020 98 228 3.7E-22 T 11-10-2018 Clos_2525 96f0d28360c1bc0e2f02a30e0a2191c0 228 Pfam PF00156 Phosphoribosyl transferase domain 135 225 2.4E-7 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Clos_2525 96f0d28360c1bc0e2f02a30e0a2191c0 228 SUPERFAMILY SSF53271 53 226 8.78E-33 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_2269 f73e63916323da8a5e07b8765ee3a9c8 242 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 57 233 2.6E-55 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Clos_2269 f73e63916323da8a5e07b8765ee3a9c8 242 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 3 242 59.709 T 11-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 Clos_2269 f73e63916323da8a5e07b8765ee3a9c8 242 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 61 228 3.0E-65 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Clos_2641 5e0c8bdbb04f0c1ebea4f02e6e112af8 317 Hamap MF_01145 Foldase protein PrsA [prsA]. 4 317 15.326 T 11-10-2018 IPR023059 Foldase protein PrsA GO:0003755 Clos_2641 5e0c8bdbb04f0c1ebea4f02e6e112af8 317 SUPERFAMILY SSF54534 183 276 1.64E-31 T 11-10-2018 Clos_2641 5e0c8bdbb04f0c1ebea4f02e6e112af8 317 SUPERFAMILY SSF109998 30 214 1.16E-23 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Clos_2641 5e0c8bdbb04f0c1ebea4f02e6e112af8 317 Pfam PF13616 PPIC-type PPIASE domain 183 275 9.0E-28 T 11-10-2018 Clos_2641 5e0c8bdbb04f0c1ebea4f02e6e112af8 317 Pfam PF13624 SurA N-terminal domain 6 155 1.3E-12 T 11-10-2018 Clos_2641 5e0c8bdbb04f0c1ebea4f02e6e112af8 317 Gene3D G3DSA:3.10.50.40 182 279 2.0E-37 T 11-10-2018 Clos_2641 5e0c8bdbb04f0c1ebea4f02e6e112af8 317 Gene3D G3DSA:1.10.4030.10 26 161 6.5E-7 T 11-10-2018 Clos_2298 ef68aa69b5144b4477b90e8a8111f7ef 452 Pfam PF14903 WG containing repeat 170 208 7.0E-8 T 11-10-2018 IPR032774 WG containing repeat Clos_2298 ef68aa69b5144b4477b90e8a8111f7ef 452 Pfam PF14903 WG containing repeat 208 243 6.4E-6 T 11-10-2018 IPR032774 WG containing repeat Clos_2298 ef68aa69b5144b4477b90e8a8111f7ef 452 Pfam PF14903 WG containing repeat 278 299 9.2E-5 T 11-10-2018 IPR032774 WG containing repeat Clos_2298 ef68aa69b5144b4477b90e8a8111f7ef 452 Pfam PF14903 WG containing repeat 243 276 9.2E-5 T 11-10-2018 IPR032774 WG containing repeat Clos_2298 ef68aa69b5144b4477b90e8a8111f7ef 452 SUPERFAMILY SSF55383 354 445 1.44E-18 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_2298 ef68aa69b5144b4477b90e8a8111f7ef 452 Pfam PF07833 Copper amine oxidase N-terminal domain 352 450 1.2E-27 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Clos_2298 ef68aa69b5144b4477b90e8a8111f7ef 452 Gene3D G3DSA:3.30.457.10 355 438 7.2E-15 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_1771 67b940809d614595b71a47c78ab98798 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 192 1.2E-61 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Clos_1771 67b940809d614595b71a47c78ab98798 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 4 193 26.023 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Clos_1771 67b940809d614595b71a47c78ab98798 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 5 193 1.5E-84 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Clos_1771 67b940809d614595b71a47c78ab98798 193 PIRSF PIRSF006102 2 193 1.6E-58 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Clos_0633 a7a5fafabe81560c451fbbc126922f8e 164 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 32 146 5.8E-24 T 11-10-2018 IPR010181 CGCAxxGCC motif Clos_0633 a7a5fafabe81560c451fbbc126922f8e 164 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 31 151 3.0E-27 T 11-10-2018 IPR010181 CGCAxxGCC motif Clos_0633 a7a5fafabe81560c451fbbc126922f8e 164 SUPERFAMILY SSF48695 31 153 1.51E-9 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily Clos_0344 bd6ddb6d32efe51324b239dd080f8e73 269 SUPERFAMILY SSF81301 1 112 2.22E-31 T 11-10-2018 Clos_0344 bd6ddb6d32efe51324b239dd080f8e73 269 Pfam PF04439 Streptomycin adenylyltransferase 1 255 2.9E-96 T 11-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase Clos_0344 bd6ddb6d32efe51324b239dd080f8e73 269 SUPERFAMILY SSF81631 116 259 2.12E-52 T 11-10-2018 Clos_0344 bd6ddb6d32efe51324b239dd080f8e73 269 Gene3D G3DSA:3.30.460.10 15 191 1.0E-72 T 11-10-2018 Clos_0344 bd6ddb6d32efe51324b239dd080f8e73 269 PIRSF PIRSF000812 1 262 7.2E-89 T 11-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase Clos_0344 bd6ddb6d32efe51324b239dd080f8e73 269 Gene3D G3DSA:1.20.120.330 122 246 1.0E-72 T 11-10-2018 Clos_1056 2d07e4a6198b67160a95f47568aae696 567 Gene3D G3DSA:1.10.287.950 260 566 1.8E-50 T 11-10-2018 Clos_1056 2d07e4a6198b67160a95f47568aae696 567 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 181 2.6E-13 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain Clos_1056 2d07e4a6198b67160a95f47568aae696 567 SMART SM00283 291 566 4.0E-29 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_1056 2d07e4a6198b67160a95f47568aae696 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 3.5E-14 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Clos_1056 2d07e4a6198b67160a95f47568aae696 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 3.5E-14 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Clos_1056 2d07e4a6198b67160a95f47568aae696 567 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 3.5E-14 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Clos_1056 2d07e4a6198b67160a95f47568aae696 567 SUPERFAMILY SSF58104 230 566 3.23E-52 T 11-10-2018 Clos_1056 2d07e4a6198b67160a95f47568aae696 567 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 514 2.4E-28 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_1633 4b7e902f1be83fd5c8f63ccb58ca2163 424 SUPERFAMILY SSF53067 121 237 7.96E-11 T 11-10-2018 Clos_1633 4b7e902f1be83fd5c8f63ccb58ca2163 424 Gene3D G3DSA:3.30.420.40 82 405 2.5E-43 T 11-10-2018 Clos_1633 4b7e902f1be83fd5c8f63ccb58ca2163 424 Gene3D G3DSA:3.30.420.40 259 395 2.5E-43 T 11-10-2018 Clos_1633 4b7e902f1be83fd5c8f63ccb58ca2163 424 Gene3D G3DSA:3.30.1490.300 156 215 2.5E-43 T 11-10-2018 Clos_1633 4b7e902f1be83fd5c8f63ccb58ca2163 424 SUPERFAMILY SSF53067 257 392 6.48E-10 T 11-10-2018 Clos_1633 4b7e902f1be83fd5c8f63ccb58ca2163 424 Pfam PF11104 Type IV pilus assembly protein PilM; 83 403 5.6E-31 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM Clos_1101 f5780677a9523c577293b32c54897949 64 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 58 17.564 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Clos_1101 f5780677a9523c577293b32c54897949 64 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 3.3E-6 T 11-10-2018 Clos_1101 f5780677a9523c577293b32c54897949 64 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 3.3E-6 T 11-10-2018 Clos_1101 f5780677a9523c577293b32c54897949 64 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 3.3E-6 T 11-10-2018 Clos_1101 f5780677a9523c577293b32c54897949 64 Pfam PF02416 mttA/Hcf106 family 5 54 2.5E-18 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Clos_1101 f5780677a9523c577293b32c54897949 64 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 48 5.2E-17 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Clos_1348 461ec142ec3e866875d17621cc87cd4f 309 Gene3D G3DSA:1.10.3720.10 87 300 3.6E-23 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1348 461ec142ec3e866875d17621cc87cd4f 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 305 9.6E-43 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_1348 461ec142ec3e866875d17621cc87cd4f 309 SUPERFAMILY SSF161098 91 288 4.09E-20 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2620 b8745606f4ffbb3c9f6881f3102d2caf 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 2.1E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_2620 b8745606f4ffbb3c9f6881f3102d2caf 192 SUPERFAMILY SSF48498 80 189 8.56E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Clos_2620 b8745606f4ffbb3c9f6881f3102d2caf 192 Gene3D G3DSA:1.10.10.60 2 52 2.5E-19 T 11-10-2018 Clos_2620 b8745606f4ffbb3c9f6881f3102d2caf 192 SUPERFAMILY SSF46689 4 79 4.19E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2620 b8745606f4ffbb3c9f6881f3102d2caf 192 Gene3D G3DSA:1.10.357.10 53 189 1.8E-16 T 11-10-2018 Clos_2620 b8745606f4ffbb3c9f6881f3102d2caf 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_2620 b8745606f4ffbb3c9f6881f3102d2caf 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0297 da0376adea207eb80e3327c5dfcb1429 390 Gene3D G3DSA:3.30.470.20 115 204 2.5E-8 T 11-10-2018 Clos_0297 da0376adea207eb80e3327c5dfcb1429 390 SUPERFAMILY SSF56059 117 318 4.28E-25 T 11-10-2018 Clos_0297 da0376adea207eb80e3327c5dfcb1429 390 Gene3D G3DSA:3.30.1490.20 133 201 2.5E-8 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Clos_0297 da0376adea207eb80e3327c5dfcb1429 390 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Clos_0297 da0376adea207eb80e3327c5dfcb1429 390 Pfam PF07478 D-ala D-ala ligase C-terminus 131 288 2.9E-7 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0297 da0376adea207eb80e3327c5dfcb1429 390 Gene3D G3DSA:3.30.470.20 224 336 2.2E-5 T 11-10-2018 Clos_2630 ba4a4df8ad16e163188fcc33f485d539 317 Pfam PF02541 Ppx/GppA phosphatase family 25 314 8.7E-63 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Clos_2630 ba4a4df8ad16e163188fcc33f485d539 317 SUPERFAMILY SSF53067 3 123 4.71E-35 T 11-10-2018 Clos_2630 ba4a4df8ad16e163188fcc33f485d539 317 Gene3D G3DSA:3.30.420.40 1 124 7.2E-41 T 11-10-2018 Clos_2630 ba4a4df8ad16e163188fcc33f485d539 317 Gene3D G3DSA:3.30.420.150 129 316 6.5E-58 T 11-10-2018 Clos_2630 ba4a4df8ad16e163188fcc33f485d539 317 SUPERFAMILY SSF53067 135 315 2.16E-45 T 11-10-2018 Clos_0855 903c929e2076d999a8cf3079b7e8bd17 311 SUPERFAMILY SSF103481 198 300 9.68E-14 T 11-10-2018 Clos_0855 903c929e2076d999a8cf3079b7e8bd17 311 SUPERFAMILY SSF103481 80 156 3.79E-7 T 11-10-2018 Clos_0855 903c929e2076d999a8cf3079b7e8bd17 311 Pfam PF00892 EamA-like transporter family 163 296 1.2E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_0855 903c929e2076d999a8cf3079b7e8bd17 311 Pfam PF00892 EamA-like transporter family 7 153 1.6E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_0402 aede6316b43704c985d128c7ac4e2d30 397 Gene3D G3DSA:3.30.70.360 186 300 3.8E-135 T 11-10-2018 Clos_0402 aede6316b43704c985d128c7ac4e2d30 397 PIRSF PIRSF005962 4 397 5.8E-132 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 Clos_0402 aede6316b43704c985d128c7ac4e2d30 397 SUPERFAMILY SSF55031 186 302 1.26E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Clos_0402 aede6316b43704c985d128c7ac4e2d30 397 Pfam PF01546 Peptidase family M20/M25/M40 76 372 3.8E-30 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Clos_0402 aede6316b43704c985d128c7ac4e2d30 397 SUPERFAMILY SSF53187 6 395 8.68E-82 T 11-10-2018 Clos_0402 aede6316b43704c985d128c7ac4e2d30 397 Pfam PF07687 Peptidase dimerisation domain 190 287 7.5E-16 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Clos_0402 aede6316b43704c985d128c7ac4e2d30 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 381 1.0E-114 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 Clos_0402 aede6316b43704c985d128c7ac4e2d30 397 Gene3D G3DSA:3.40.630.10 18 378 3.8E-135 T 11-10-2018 Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 SUPERFAMILY SSF55920 1 246 4.19E-92 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 42.827 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 Pfam PF00557 Metallopeptidase family M24 11 239 1.3E-56 T 11-10-2018 IPR000994 Peptidase M24 Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 7.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 7.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 7.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 7.7E-23 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 2.9E-102 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Clos_0514 3f58cc80db9d4259a7daa6fcbdf4e68f 248 Gene3D G3DSA:3.90.230.10 1 248 1.1E-106 T 11-10-2018 Clos_0780 67a926d823f7dc61f8c6592fafc86cd5 245 SMART SM00422 3 72 1.6E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0780 67a926d823f7dc61f8c6592fafc86cd5 245 Pfam PF07739 TipAS antibiotic-recognition domain 143 242 1.8E-6 T 11-10-2018 IPR012925 TipAS antibiotic-recognition domain Clos_0780 67a926d823f7dc61f8c6592fafc86cd5 245 Pfam PF13411 MerR HTH family regulatory protein 3 71 4.8E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0780 67a926d823f7dc61f8c6592fafc86cd5 245 SUPERFAMILY SSF46955 3 114 1.03E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_0780 67a926d823f7dc61f8c6592fafc86cd5 245 Gene3D G3DSA:1.10.1660.10 2 136 6.6E-36 T 11-10-2018 Clos_2576 fb2b40f18d70734aeba4cc19f763124d 466 Gene3D G3DSA:3.90.1310.10 54 365 6.1E-127 T 11-10-2018 Clos_2576 fb2b40f18d70734aeba4cc19f763124d 466 Gene3D G3DSA:3.40.710.10 139 458 6.1E-127 T 11-10-2018 Clos_2576 fb2b40f18d70734aeba4cc19f763124d 466 Pfam PF00905 Penicillin binding protein transpeptidase domain 157 458 5.1E-72 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Clos_2576 fb2b40f18d70734aeba4cc19f763124d 466 SUPERFAMILY SSF56601 140 463 1.24E-93 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_2576 fb2b40f18d70734aeba4cc19f763124d 466 SUPERFAMILY SSF56519 49 139 6.47E-10 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Clos_1848 1a9f810a04a75f074141a51d21f72aac 142 Pfam PF13958 Toxin ToxN, type III toxin-antitoxin system 26 134 5.9E-29 T 11-10-2018 IPR025911 ToxN/AbiQ toxin GO:0003723|GO:0004521 Clos_1848 1a9f810a04a75f074141a51d21f72aac 142 Gene3D G3DSA:2.30.30.890 21 141 1.6E-28 T 11-10-2018 Clos_0785 b4ddef2ca6e9176b4d1b6c9a90c065c2 144 SUPERFAMILY SSF46785 7 135 1.66E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0785 b4ddef2ca6e9176b4d1b6c9a90c065c2 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Clos_0785 b4ddef2ca6e9176b4d1b6c9a90c065c2 144 SMART SM00347 25 125 8.4E-19 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0785 b4ddef2ca6e9176b4d1b6c9a90c065c2 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.1E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0785 b4ddef2ca6e9176b4d1b6c9a90c065c2 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.1E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0785 b4ddef2ca6e9176b4d1b6c9a90c065c2 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.1E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0785 b4ddef2ca6e9176b4d1b6c9a90c065c2 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.1E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0785 b4ddef2ca6e9176b4d1b6c9a90c065c2 144 Gene3D G3DSA:1.10.10.10 5 138 2.6E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0785 b4ddef2ca6e9176b4d1b6c9a90c065c2 144 Pfam PF01047 MarR family 32 88 2.9E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1049 c9f875c5ce40fc84ce79f4805bfe3338 74 SUPERFAMILY SSF47413 4 55 4.96E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1049 c9f875c5ce40fc84ce79f4805bfe3338 74 SMART SM00530 3 58 9.1E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1049 c9f875c5ce40fc84ce79f4805bfe3338 74 Pfam PF01381 Helix-turn-helix 4 53 2.1E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1049 c9f875c5ce40fc84ce79f4805bfe3338 74 Gene3D G3DSA:1.10.260.40 1 74 3.1E-12 T 11-10-2018 Clos_0891 9ee0ebc3943c00bd4f0f49a2f7190615 364 Gene3D G3DSA:3.40.50.620 1 213 4.8E-98 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0891 9ee0ebc3943c00bd4f0f49a2f7190615 364 Gene3D G3DSA:2.30.30.280 214 280 2.2E-27 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Clos_0891 9ee0ebc3943c00bd4f0f49a2f7190615 364 Pfam PF03054 tRNA methyl transferase 9 359 1.3E-145 T 11-10-2018 Clos_0891 9ee0ebc3943c00bd4f0f49a2f7190615 364 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 359 3.1E-141 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Clos_0891 9ee0ebc3943c00bd4f0f49a2f7190615 364 SUPERFAMILY SSF52402 6 245 5.73E-60 T 11-10-2018 Clos_0891 9ee0ebc3943c00bd4f0f49a2f7190615 364 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 360 41.137 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Clos_0891 9ee0ebc3943c00bd4f0f49a2f7190615 364 Gene3D G3DSA:2.40.30.10 281 364 9.0E-28 T 11-10-2018 Clos_2544 5dc5566863638fbabf89a086d362b179 332 Gene3D G3DSA:3.40.718.10 1 329 5.1E-122 T 11-10-2018 Clos_2544 5dc5566863638fbabf89a086d362b179 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 323 1.0E-97 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Clos_2544 5dc5566863638fbabf89a086d362b179 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 326 1.4E-96 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Clos_2544 5dc5566863638fbabf89a086d362b179 332 SUPERFAMILY SSF53659 4 329 1.36E-99 T 11-10-2018 Clos_0528 4305a006b8dbef32289ad5b1c4d9e68c 130 SUPERFAMILY SSF54211 6 130 2.12E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_0528 4305a006b8dbef32289ad5b1c4d9e68c 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.0E-45 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Clos_0528 4305a006b8dbef32289ad5b1c4d9e68c 130 Gene3D G3DSA:3.30.230.10 1 130 2.5E-51 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_0528 4305a006b8dbef32289ad5b1c4d9e68c 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Clos_0528 4305a006b8dbef32289ad5b1c4d9e68c 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.172 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 SMART SM00419 169 218 4.0E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 SMART SM00100 19 137 3.1E-19 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 SUPERFAMILY SSF46785 155 225 1.14E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 Gene3D G3DSA:2.60.120.10 3 152 8.9E-37 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 Pfam PF13545 Crp-like helix-turn-helix domain 157 225 1.7E-19 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 Gene3D G3DSA:1.10.10.10 153 226 1.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 SUPERFAMILY SSF51206 13 151 1.26E-35 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 Pfam PF00027 Cyclic nucleotide-binding domain 38 125 4.3E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 175 191 9.9E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2047 2a422fc08d3c82b12b2fe74ac8813eea 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 191 206 9.9E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2352 127b3eb4faa403396e1939ebc97a5383 112 SUPERFAMILY SSF46785 3 102 5.56E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2352 127b3eb4faa403396e1939ebc97a5383 112 Pfam PF03551 Transcriptional regulator PadR-like family 16 89 2.8E-25 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal Clos_2352 127b3eb4faa403396e1939ebc97a5383 112 Gene3D G3DSA:1.10.10.10 1 109 3.1E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2813 c1309be1c3883c5a48930a193d5f5433 329 Gene3D G3DSA:3.40.50.1980 175 329 3.8E-41 T 11-10-2018 Clos_2813 c1309be1c3883c5a48930a193d5f5433 329 SUPERFAMILY SSF53807 56 323 3.26E-59 T 11-10-2018 Clos_2813 c1309be1c3883c5a48930a193d5f5433 329 Gene3D G3DSA:3.40.50.1980 50 173 5.7E-32 T 11-10-2018 Clos_2813 c1309be1c3883c5a48930a193d5f5433 329 Pfam PF01497 Periplasmic binding protein 98 300 7.6E-29 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_0468 a55e5f0b5cf81d040064e5a2063cf6d3 221 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 8 169 5.3E-77 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Clos_0468 a55e5f0b5cf81d040064e5a2063cf6d3 221 Gene3D G3DSA:2.160.10.10 70 189 1.1E-37 T 11-10-2018 Clos_0468 a55e5f0b5cf81d040064e5a2063cf6d3 221 Pfam PF06426 Serine acetyltransferase, N-terminal 6 38 5.8E-5 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Clos_0468 a55e5f0b5cf81d040064e5a2063cf6d3 221 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 74 111 1.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Clos_0468 a55e5f0b5cf81d040064e5a2063cf6d3 221 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 154 6.3E-9 T 11-10-2018 IPR001451 Hexapeptide repeat Clos_0468 a55e5f0b5cf81d040064e5a2063cf6d3 221 Gene3D G3DSA:1.10.3130.10 2 69 1.5E-26 T 11-10-2018 Clos_0468 a55e5f0b5cf81d040064e5a2063cf6d3 221 PIRSF PIRSF000441 2 221 1.5E-83 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Clos_0468 a55e5f0b5cf81d040064e5a2063cf6d3 221 SUPERFAMILY SSF51161 4 171 5.68E-56 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Clos_2110 20fd7512e92f734853dda060a4579de4 76 Hamap MF_01217 Acyl carrier protein [acpP]. 1 76 20.033 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Clos_2110 20fd7512e92f734853dda060a4579de4 76 Gene3D G3DSA:1.10.1200.10 1 76 3.4E-26 T 11-10-2018 IPR036736 ACP-like superfamily Clos_2110 20fd7512e92f734853dda060a4579de4 76 SUPERFAMILY SSF47336 2 75 2.09E-23 T 11-10-2018 IPR036736 ACP-like superfamily Clos_2110 20fd7512e92f734853dda060a4579de4 76 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 75 1.0E-13 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Clos_2110 20fd7512e92f734853dda060a4579de4 76 Pfam PF00550 Phosphopantetheine attachment site 4 72 9.9E-19 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain Clos_2110 20fd7512e92f734853dda060a4579de4 76 SMART SM00823 Phosphopantetheine attachment site 3 76 0.007 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Clos_2110 20fd7512e92f734853dda060a4579de4 76 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 76 7.3E-25 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Clos_2183 acd47e3d04c2d9f4a0d35a16d848ad8b 176 Pfam PF08281 Sigma-70, region 4 114 163 1.0E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_2183 acd47e3d04c2d9f4a0d35a16d848ad8b 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 168 3.5E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_2183 acd47e3d04c2d9f4a0d35a16d848ad8b 176 Gene3D G3DSA:1.10.1740.10 2 79 6.8E-13 T 11-10-2018 Clos_2183 acd47e3d04c2d9f4a0d35a16d848ad8b 176 SUPERFAMILY SSF88659 108 169 3.74E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_2183 acd47e3d04c2d9f4a0d35a16d848ad8b 176 Gene3D G3DSA:1.10.10.10 105 170 1.3E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2183 acd47e3d04c2d9f4a0d35a16d848ad8b 176 Pfam PF04542 Sigma-70 region 2 9 76 1.1E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2183 acd47e3d04c2d9f4a0d35a16d848ad8b 176 SUPERFAMILY SSF88946 7 84 7.85E-17 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0539 78fd24d566273304a9f0409969f85657 341 Gene3D G3DSA:3.90.650.10 168 340 1.3E-69 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Clos_0539 78fd24d566273304a9f0409969f85657 341 Gene3D G3DSA:3.30.1330.10 2 167 5.0E-68 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Clos_0539 78fd24d566273304a9f0409969f85657 341 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 339 47.73 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_0539 78fd24d566273304a9f0409969f85657 341 SUPERFAMILY SSF55326 2 167 3.59E-51 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Clos_0539 78fd24d566273304a9f0409969f85657 341 SUPERFAMILY SSF56042 168 339 5.23E-59 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Clos_0539 78fd24d566273304a9f0409969f85657 341 Pfam PF00586 AIR synthase related protein, N-terminal domain 71 161 2.1E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Clos_0539 78fd24d566273304a9f0409969f85657 341 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 338 5.8E-33 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Clos_0539 78fd24d566273304a9f0409969f85657 341 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 334 2.7E-140 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Clos_1536 ad5957ec1dea4a279eeb5cc264eb8e93 412 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 9.3E-44 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Clos_1536 ad5957ec1dea4a279eeb5cc264eb8e93 412 SUPERFAMILY SSF63411 223 408 1.0E-46 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_1536 ad5957ec1dea4a279eeb5cc264eb8e93 412 Gene3D G3DSA:3.30.830.10 1 216 1.6E-76 T 11-10-2018 Clos_1536 ad5957ec1dea4a279eeb5cc264eb8e93 412 Pfam PF05193 Peptidase M16 inactive domain 165 340 2.1E-40 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Clos_1536 ad5957ec1dea4a279eeb5cc264eb8e93 412 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Clos_1536 ad5957ec1dea4a279eeb5cc264eb8e93 412 Gene3D G3DSA:3.30.830.10 222 411 3.0E-57 T 11-10-2018 Clos_1536 ad5957ec1dea4a279eeb5cc264eb8e93 412 SUPERFAMILY SSF63411 2 211 3.67E-63 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_1801 80e77f60db796407f2efd00bc615e95a 165 Gene3D G3DSA:3.40.630.30 1 164 3.2E-41 T 11-10-2018 Clos_1801 80e77f60db796407f2efd00bc615e95a 165 Pfam PF00583 Acetyltransferase (GNAT) family 39 138 2.7E-17 T 11-10-2018 IPR000182 GNAT domain Clos_1801 80e77f60db796407f2efd00bc615e95a 165 SUPERFAMILY SSF55729 1 163 2.16E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0197 a30e19ed72454c8def0ac9f278fae9a7 361 Pfam PF01497 Periplasmic binding protein 83 292 2.7E-25 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_0197 a30e19ed72454c8def0ac9f278fae9a7 361 SUPERFAMILY SSF53807 41 354 1.06E-60 T 11-10-2018 Clos_0197 a30e19ed72454c8def0ac9f278fae9a7 361 Gene3D G3DSA:3.40.50.1980 26 358 5.4E-74 T 11-10-2018 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 Gene3D G3DSA:1.20.5.1150 16 54 8.9E-21 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 58 5.5E-23 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 24.607 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 Pfam PF01165 Ribosomal protein S21 4 55 6.2E-23 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 1.0E-8 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.4E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.4E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.4E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1239 972572746c4a1677302f066b2fcc15f7 59 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.4E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0339 284ad1391c27afb729bea3193d8b6391 268 SUPERFAMILY SSF89550 1 254 1.44E-27 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Clos_0339 284ad1391c27afb729bea3193d8b6391 268 Gene3D G3DSA:3.20.20.140 1 267 4.4E-52 T 11-10-2018 Clos_1570 014436b54be3f843b5ebe8b0481bf9be 272 Gene3D G3DSA:3.40.50.970 29 240 1.5E-32 T 11-10-2018 Clos_1570 014436b54be3f843b5ebe8b0481bf9be 272 SUPERFAMILY SSF52518 14 260 2.28E-78 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_1570 014436b54be3f843b5ebe8b0481bf9be 272 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 52 199 1.1E-38 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Clos_0435 60681125f525a3795d68557f5634511c 514 SUPERFAMILY SSF100950 225 496 1.59E-84 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_0435 60681125f525a3795d68557f5634511c 514 SUPERFAMILY SSF100950 2 223 1.5E-69 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_0435 60681125f525a3795d68557f5634511c 514 Gene3D G3DSA:3.40.1080.10 4 180 1.8E-14 T 11-10-2018 Clos_0435 60681125f525a3795d68557f5634511c 514 Gene3D G3DSA:3.30.750.70 254 329 7.1E-8 T 11-10-2018 Clos_0435 60681125f525a3795d68557f5634511c 514 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 10 495 1.6E-227 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 Clos_0435 60681125f525a3795d68557f5634511c 514 Gene3D G3DSA:3.40.1080.20 336 477 3.0E-44 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily Clos_0435 60681125f525a3795d68557f5634511c 514 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 7 215 1.7E-31 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 Clos_0435 60681125f525a3795d68557f5634511c 514 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 317 463 3.4E-48 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Clos_0700 81433f4462de18b31c1631dc330d1160 226 Gene3D G3DSA:3.60.160.10 1 226 9.7E-78 T 11-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily Clos_0700 81433f4462de18b31c1631dc330d1160 226 Pfam PF01987 Mitochondrial biogenesis AIM24 7 209 4.1E-64 T 11-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Clos_0700 81433f4462de18b31c1631dc330d1160 226 SUPERFAMILY SSF51219 1 225 1.49E-69 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Clos_0700 81433f4462de18b31c1631dc330d1160 226 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 1 223 6.4E-52 T 11-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Clos_1041 bd123af13af4a46210b67408e444bf9c 190 Gene3D G3DSA:3.40.920.10 2 190 4.6E-50 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_1041 bd123af13af4a46210b67408e444bf9c 190 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 186 8.3E-40 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Clos_1041 bd123af13af4a46210b67408e444bf9c 190 SUPERFAMILY SSF53323 3 188 1.57E-37 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_1742 13abbbca698c2d8e6dec6a3a2d4d6bb1 223 Pfam PF03315 Serine dehydratase beta chain 15 133 6.3E-14 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Clos_1742 13abbbca698c2d8e6dec6a3a2d4d6bb1 223 Pfam PF01842 ACT domain 149 205 4.2E-9 T 11-10-2018 IPR002912 ACT domain Clos_1742 13abbbca698c2d8e6dec6a3a2d4d6bb1 223 Gene3D G3DSA:3.30.70.260 148 222 4.1E-14 T 11-10-2018 Clos_1742 13abbbca698c2d8e6dec6a3a2d4d6bb1 223 PIRSF PIRSF036692 1 222 9.7E-94 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Clos_1742 13abbbca698c2d8e6dec6a3a2d4d6bb1 223 SUPERFAMILY SSF55021 138 210 1.56E-15 T 11-10-2018 Clos_1742 13abbbca698c2d8e6dec6a3a2d4d6bb1 223 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 204 1.1E-78 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Clos_1742 13abbbca698c2d8e6dec6a3a2d4d6bb1 223 Gene3D G3DSA:3.30.1330.90 14 138 3.0E-21 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Clos_1742 13abbbca698c2d8e6dec6a3a2d4d6bb1 223 SUPERFAMILY SSF143548 19 138 1.57E-32 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Clos_2332 e3ecf2604dc498517ed6edfbcd67ca85 296 Hamap MF_00663 Phosphatidylserine decarboxylase proenzyme [psd]. 2 296 41.533 T 11-10-2018 IPR033179 Phosphatidylserine decarboxylase, prokaryotic type 2 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Clos_2332 e3ecf2604dc498517ed6edfbcd67ca85 296 Pfam PF02666 Phosphatidylserine decarboxylase 88 294 2.0E-64 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Clos_2332 e3ecf2604dc498517ed6edfbcd67ca85 296 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 74 284 9.5E-47 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Clos_1119 8578c173523ed037b40b99010b160f86 251 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 251 1.8E-130 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Clos_1119 8578c173523ed037b40b99010b160f86 251 SUPERFAMILY SSF52540 5 246 2.13E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1119 8578c173523ed037b40b99010b160f86 251 Gene3D G3DSA:3.40.50.300 4 249 9.4E-66 T 11-10-2018 Clos_1119 8578c173523ed037b40b99010b160f86 251 Pfam PF00005 ABC transporter 20 176 3.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1119 8578c173523ed037b40b99010b160f86 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1119 8578c173523ed037b40b99010b160f86 251 SMART SM00382 29 238 8.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2561 549382471fc353c35408e2f42af435a1 289 SUPERFAMILY SSF52943 6 288 3.14E-86 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2561 549382471fc353c35408e2f42af435a1 289 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.7E-35 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2561 549382471fc353c35408e2f42af435a1 289 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 1.7E-35 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2561 549382471fc353c35408e2f42af435a1 289 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.7E-35 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2561 549382471fc353c35408e2f42af435a1 289 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 1.7E-35 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2561 549382471fc353c35408e2f42af435a1 289 Pfam PF00231 ATP synthase 6 288 5.7E-95 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2561 549382471fc353c35408e2f42af435a1 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 3 288 34.807 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2561 549382471fc353c35408e2f42af435a1 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2561 549382471fc353c35408e2f42af435a1 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 6 288 1.3E-96 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2561 549382471fc353c35408e2f42af435a1 289 Gene3D G3DSA:3.40.1380.10 63 207 7.2E-100 T 11-10-2018 Clos_2561 549382471fc353c35408e2f42af435a1 289 Gene3D G3DSA:1.10.287.80 8 284 7.2E-100 T 11-10-2018 Clos_1284 3659c4c120425fedcaa517ff8f7b8f39 380 Pfam PF14657 Arm DNA-binding domain 12 53 1.1E-6 T 11-10-2018 IPR028259 AP2-like integrase, N-terminal domain Clos_1284 3659c4c120425fedcaa517ff8f7b8f39 380 Pfam PF00589 Phage integrase family 169 364 2.7E-26 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Clos_1284 3659c4c120425fedcaa517ff8f7b8f39 380 SUPERFAMILY SSF56349 60 372 2.33E-67 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Clos_1284 3659c4c120425fedcaa517ff8f7b8f39 380 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 61 113 1.6E-10 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Clos_1284 3659c4c120425fedcaa517ff8f7b8f39 380 Gene3D G3DSA:1.10.150.130 54 164 5.9E-29 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Clos_1284 3659c4c120425fedcaa517ff8f7b8f39 380 Gene3D G3DSA:1.10.443.10 166 378 6.7E-50 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Clos_0517 3124a78683104ff03ecd2182f8590da2 37 SUPERFAMILY SSF57840 1 37 4.45E-17 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0517 3124a78683104ff03ecd2182f8590da2 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 2.8E-24 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0517 3124a78683104ff03ecd2182f8590da2 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 1.0E-7 T 11-10-2018 Clos_0517 3124a78683104ff03ecd2182f8590da2 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.163 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0517 3124a78683104ff03ecd2182f8590da2 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0517 3124a78683104ff03ecd2182f8590da2 37 Pfam PF00444 Ribosomal protein L36 1 37 7.6E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1809 9204985ea4a4a6a7d4c5473747d2372a 170 Pfam PF00583 Acetyltransferase (GNAT) family 45 144 2.4E-20 T 11-10-2018 IPR000182 GNAT domain Clos_1809 9204985ea4a4a6a7d4c5473747d2372a 170 SUPERFAMILY SSF55729 12 157 3.99E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1809 9204985ea4a4a6a7d4c5473747d2372a 170 Gene3D G3DSA:3.40.630.30 10 170 3.7E-47 T 11-10-2018 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 Gene3D G3DSA:1.10.260.30 327 445 1.4E-44 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 SMART SM00962 101 296 6.1E-122 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 SMART SM00963 2 87 3.9E-36 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 Pfam PF02978 Signal peptide binding domain 327 425 4.1E-35 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 4.0E-23 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 SUPERFAMILY SSF52540 43 353 1.39E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 427 4.9E-192 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 Gene3D G3DSA:3.40.50.300 91 285 9.2E-133 T 11-10-2018 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 SUPERFAMILY SSF47446 327 426 5.89E-37 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 SMART SM00382 100 301 5.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 5.4E-80 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 447 34.933 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Clos_1463 5c41dabc6c7cee269d90a56129e2607b 448 Gene3D G3DSA:1.20.120.140 6 306 9.2E-133 T 11-10-2018 Clos_1367 69eb1cea6d5e66380a50896714e067be 429 SUPERFAMILY SSF63411 14 224 7.16E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_1367 69eb1cea6d5e66380a50896714e067be 429 Pfam PF05193 Peptidase M16 inactive domain 184 364 3.2E-19 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Clos_1367 69eb1cea6d5e66380a50896714e067be 429 Pfam PF00675 Insulinase (Peptidase family M16) 64 177 8.4E-17 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Clos_1367 69eb1cea6d5e66380a50896714e067be 429 Gene3D G3DSA:3.30.830.10 12 240 1.0E-57 T 11-10-2018 Clos_1367 69eb1cea6d5e66380a50896714e067be 429 SUPERFAMILY SSF63411 284 426 3.84E-17 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Clos_1367 69eb1cea6d5e66380a50896714e067be 429 Gene3D G3DSA:3.30.830.10 241 428 6.4E-34 T 11-10-2018 Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 Gene3D G3DSA:3.40.50.720 1 246 4.2E-86 T 11-10-2018 Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 SUPERFAMILY SSF51735 4 245 3.81E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 1.6E-4 T 11-10-2018 Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0257 0a369d772b8b97f2525aa7fcbfc4e7e6 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 4.3E-68 T 11-10-2018 Clos_0603 9569bd455b9fccbbc0dd39b468e69d57 354 PIRSF PIRSF038991 2 354 2.0E-90 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Clos_0603 9569bd455b9fccbbc0dd39b468e69d57 354 Pfam PF05145 Transition state regulatory protein AbrB 6 158 1.6E-21 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Clos_0603 9569bd455b9fccbbc0dd39b468e69d57 354 Pfam PF05145 Transition state regulatory protein AbrB 184 348 3.5E-21 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 Clos_0530 f607142d1965a9a670d4828e9f693276 238 Gene3D G3DSA:3.40.630.40 40 236 3.0E-59 T 11-10-2018 Clos_0530 f607142d1965a9a670d4828e9f693276 238 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 42 231 1.6E-68 T 11-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 Clos_0530 f607142d1965a9a670d4828e9f693276 238 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 44 229 1.5E-48 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_0530 f607142d1965a9a670d4828e9f693276 238 SMART SM00646 117 229 4.4E-23 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_0530 f607142d1965a9a670d4828e9f693276 238 SUPERFAMILY SSF53187 42 234 1.21E-53 T 11-10-2018 Clos_0443 8154200591a54dba0b6e359a7ba27c90 354 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 1 348 5.2E-154 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Clos_0443 8154200591a54dba0b6e359a7ba27c90 354 PIRSF PIRSF015658 1 354 1.2E-173 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Clos_0443 8154200591a54dba0b6e359a7ba27c90 354 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 1 353 3.8E-166 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Clos_2558 da1dcccedf85b6b4a5a2fda288033c50 171 Pfam PF07009 NusG domain II 43 158 2.9E-14 T 11-10-2018 IPR024045 NusG, domain 2 Clos_2558 da1dcccedf85b6b4a5a2fda288033c50 171 Gene3D G3DSA:2.60.320.10 57 170 5.6E-12 T 11-10-2018 IPR038690 NusG, domain 2 superfamily Clos_0286 f88d01181d6e64be90393445de677c5b 228 SUPERFAMILY SSF46785 10 103 4.98E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0286 f88d01181d6e64be90393445de677c5b 228 Gene3D G3DSA:1.20.120.530 81 221 3.0E-34 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Clos_0286 f88d01181d6e64be90393445de677c5b 228 SMART SM00895 87 211 7.1E-25 T 11-10-2018 IPR011711 GntR, C-terminal Clos_0286 f88d01181d6e64be90393445de677c5b 228 SMART SM00345 19 77 2.0E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0286 f88d01181d6e64be90393445de677c5b 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.9E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0286 f88d01181d6e64be90393445de677c5b 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.9E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0286 f88d01181d6e64be90393445de677c5b 228 Pfam PF07729 FCD domain 87 210 7.5E-31 T 11-10-2018 IPR011711 GntR, C-terminal Clos_0286 f88d01181d6e64be90393445de677c5b 228 Gene3D G3DSA:1.10.10.10 12 78 1.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0286 f88d01181d6e64be90393445de677c5b 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 5.6E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0286 f88d01181d6e64be90393445de677c5b 228 SUPERFAMILY SSF48008 83 219 2.88E-35 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Clos_1760 5f75a454cb7e7a7b7684f17440e4574e 265 Pfam PF13614 AAA domain 3 160 3.6E-25 T 11-10-2018 IPR025669 AAA domain Clos_1760 5f75a454cb7e7a7b7684f17440e4574e 265 Gene3D G3DSA:3.40.50.300 1 253 7.5E-68 T 11-10-2018 Clos_1760 5f75a454cb7e7a7b7684f17440e4574e 265 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 261 1.2E-124 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Clos_1760 5f75a454cb7e7a7b7684f17440e4574e 265 SUPERFAMILY SSF52540 1 248 3.87E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1760 5f75a454cb7e7a7b7684f17440e4574e 265 PIRSF PIRSF003092 1 265 5.6E-91 T 11-10-2018 IPR025501 ATP binding protein MinD Clos_2817 1adbd50a8b4a1544f00df2c98f5adb0e 77 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 76 1.7E-21 T 11-10-2018 IPR005243 Redox-active disulphide protein 2 Clos_2817 1adbd50a8b4a1544f00df2c98f5adb0e 77 Gene3D G3DSA:3.40.30.10 1 75 3.7E-27 T 11-10-2018 Clos_2817 1adbd50a8b4a1544f00df2c98f5adb0e 77 Pfam PF13192 Thioredoxin domain 1 75 1.0E-25 T 11-10-2018 IPR012336 Thioredoxin-like fold Clos_2817 1adbd50a8b4a1544f00df2c98f5adb0e 77 SUPERFAMILY SSF52833 1 76 3.72E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_2817 1adbd50a8b4a1544f00df2c98f5adb0e 77 PIRSF PIRSF037031 1 77 4.6E-30 T 11-10-2018 IPR005243 Redox-active disulphide protein 2 Clos_2520 59b3eb0bbe820f3bae6e082b1f8e1d26 438 SUPERFAMILY SSF64518 1 438 1.83E-66 T 11-10-2018 Clos_2520 59b3eb0bbe820f3bae6e082b1f8e1d26 438 Pfam PF00700 Bacterial flagellin C-terminal helical region 358 437 4.0E-5 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Clos_2520 59b3eb0bbe820f3bae6e082b1f8e1d26 438 Gene3D G3DSA:1.20.1330.10 40 222 6.9E-39 T 11-10-2018 Clos_2520 59b3eb0bbe820f3bae6e082b1f8e1d26 438 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 437 9.2E-69 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Clos_2520 59b3eb0bbe820f3bae6e082b1f8e1d26 438 Gene3D G3DSA:1.20.1330.10 308 410 2.6E-5 T 11-10-2018 Clos_2520 59b3eb0bbe820f3bae6e082b1f8e1d26 438 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 143 2.3E-17 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Clos_2211 2b33503e26036c55305f630933a36c00 347 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 8 342 3.8E-92 T 11-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 Clos_2211 2b33503e26036c55305f630933a36c00 347 SUPERFAMILY SSF53383 9 344 2.34E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2211 2b33503e26036c55305f630933a36c00 347 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 202 215 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Clos_2211 2b33503e26036c55305f630933a36c00 347 Gene3D G3DSA:3.40.640.10 27 250 9.2E-110 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_2211 2b33503e26036c55305f630933a36c00 347 Pfam PF00155 Aminotransferase class I and II 14 340 1.9E-50 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_2211 2b33503e26036c55305f630933a36c00 347 Gene3D G3DSA:3.90.1150.10 15 342 9.2E-110 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_0800 9d54003f81cd3e74974acb7f75aac6a0 197 SUPERFAMILY SSF143414 3 96 2.09E-26 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_0800 9d54003f81cd3e74974acb7f75aac6a0 197 Pfam PF00936 BMC domain 4 78 7.4E-21 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0800 9d54003f81cd3e74974acb7f75aac6a0 197 SMART SM00877 3 79 1.9E-23 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0800 9d54003f81cd3e74974acb7f75aac6a0 197 Gene3D G3DSA:3.30.70.1710 1 112 1.8E-30 T 11-10-2018 Clos_2657 492e8e36f6dbf4c22afb66b5dc385318 287 Gene3D G3DSA:1.10.8.100 218 286 1.2E-19 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Clos_2657 492e8e36f6dbf4c22afb66b5dc385318 287 SMART SM00650 35 210 1.2E-78 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Clos_2657 492e8e36f6dbf4c22afb66b5dc385318 287 Gene3D G3DSA:3.40.50.150 1 214 3.6E-76 T 11-10-2018 Clos_2657 492e8e36f6dbf4c22afb66b5dc385318 287 SUPERFAMILY SSF53335 17 285 3.77E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2657 492e8e36f6dbf4c22afb66b5dc385318 287 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 78 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Clos_2657 492e8e36f6dbf4c22afb66b5dc385318 287 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 284 56.37 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Clos_2657 492e8e36f6dbf4c22afb66b5dc385318 287 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 19 282 8.1E-84 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Clos_2657 492e8e36f6dbf4c22afb66b5dc385318 287 Pfam PF00398 Ribosomal RNA adenine dimethylase 19 276 2.6E-66 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Clos_1015 7a8863e787b64bb2c999c46b016dcc76 206 Gene3D G3DSA:3.40.50.10230 2 206 3.9E-78 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Clos_1015 7a8863e787b64bb2c999c46b016dcc76 206 Pfam PF02570 Precorrin-8X methylmutase 8 202 1.5E-73 T 11-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 Clos_1015 7a8863e787b64bb2c999c46b016dcc76 206 SUPERFAMILY SSF63965 7 204 6.67E-70 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Clos_2614 e6f9f1fe5cfe01b5ad3bbf815440fbbc 442 Pfam PF12704 MacB-like periplasmic core domain 34 238 1.2E-34 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Clos_2614 e6f9f1fe5cfe01b5ad3bbf815440fbbc 442 Pfam PF02687 FtsX-like permease family 349 431 1.7E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_1194 ccbe6afd2efa6d53ca0a405d4aa91e3f 383 Pfam PF05384 Sensor protein DegS 13 170 1.6E-51 T 11-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 Clos_1194 ccbe6afd2efa6d53ca0a405d4aa91e3f 383 Pfam PF07730 Histidine kinase 180 247 1.2E-16 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Clos_1194 ccbe6afd2efa6d53ca0a405d4aa91e3f 383 SUPERFAMILY SSF55874 252 380 7.6E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1194 ccbe6afd2efa6d53ca0a405d4aa91e3f 383 Gene3D G3DSA:3.30.565.10 253 382 2.1E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1194 ccbe6afd2efa6d53ca0a405d4aa91e3f 383 PIRSF PIRSF003169 2 383 8.7E-131 T 11-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 Clos_1194 ccbe6afd2efa6d53ca0a405d4aa91e3f 383 SMART SM00387 285 383 4.1E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1194 ccbe6afd2efa6d53ca0a405d4aa91e3f 383 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 382 6.8E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1257 a6a6257afa8efe59d5f6454644778fe3 277 Pfam PF03618 Kinase/pyrophosphorylase 8 263 3.9E-100 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Clos_1257 a6a6257afa8efe59d5f6454644778fe3 277 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 6 268 63.24 T 11-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein Clos_0588 fef95cef96a51951591204ae56e6a53a 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 166 4.1E-6 T 11-10-2018 Clos_0588 fef95cef96a51951591204ae56e6a53a 598 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 542 564 4.1E-6 T 11-10-2018 Clos_0588 fef95cef96a51951591204ae56e6a53a 598 Pfam PF00890 FAD binding domain 146 566 4.2E-59 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_0588 fef95cef96a51951591204ae56e6a53a 598 SMART SM00900 47 121 1.2E-18 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0588 fef95cef96a51951591204ae56e6a53a 598 SUPERFAMILY SSF56425 384 537 8.37E-21 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_0588 fef95cef96a51951591204ae56e6a53a 598 SUPERFAMILY SSF51905 139 596 7.79E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0588 fef95cef96a51951591204ae56e6a53a 598 Gene3D G3DSA:3.90.700.10 377 529 4.4E-115 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_0588 fef95cef96a51951591204ae56e6a53a 598 Gene3D G3DSA:3.50.50.60 145 594 4.4E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0588 fef95cef96a51951591204ae56e6a53a 598 Pfam PF04205 FMN-binding domain 47 118 1.7E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0039 f46d902e35de85de0c80f082b9dc3543 608 SUPERFAMILY SSF90123 15 319 1.19E-10 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0039 f46d902e35de85de0c80f082b9dc3543 608 Pfam PF00005 ABC transporter 367 520 1.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0039 f46d902e35de85de0c80f082b9dc3543 608 Gene3D G3DSA:3.40.50.300 341 593 9.2E-75 T 11-10-2018 Clos_0039 f46d902e35de85de0c80f082b9dc3543 608 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0039 f46d902e35de85de0c80f082b9dc3543 608 Gene3D G3DSA:1.20.1560.10 6 326 1.2E-6 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0039 f46d902e35de85de0c80f082b9dc3543 608 SUPERFAMILY SSF52540 342 590 7.34E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0039 f46d902e35de85de0c80f082b9dc3543 608 SMART SM00382 375 574 2.3E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0564 b1fbfec57a6f224922134d09a6c79746 341 SUPERFAMILY SSF117892 144 276 3.27E-12 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Clos_0564 b1fbfec57a6f224922134d09a6c79746 341 SMART SM00244 76 274 2.9E-18 T 11-10-2018 IPR001107 Band 7 domain Clos_0564 b1fbfec57a6f224922134d09a6c79746 341 Gene3D G3DSA:3.30.479.30 142 276 5.0E-10 T 11-10-2018 Clos_0564 b1fbfec57a6f224922134d09a6c79746 341 Pfam PF01145 SPFH domain / Band 7 family 81 285 5.9E-24 T 11-10-2018 IPR001107 Band 7 domain Clos_0854 e4c9f9851300e3ee6eac4adafc8adec1 390 Pfam PF13556 PucR C-terminal helix-turn-helix domain 326 383 1.3E-13 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Clos_0854 e4c9f9851300e3ee6eac4adafc8adec1 390 Gene3D G3DSA:1.10.10.2840 269 388 2.5E-12 T 11-10-2018 Clos_0854 e4c9f9851300e3ee6eac4adafc8adec1 390 Pfam PF07905 Purine catabolism regulatory protein-like family 7 133 2.3E-21 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain Clos_0189 7155b47295217d3dad3790617a3e7acf 548 SUPERFAMILY SSF53187 8 535 8.0E-29 T 11-10-2018 Clos_0189 7155b47295217d3dad3790617a3e7acf 548 Pfam PF01546 Peptidase family M20/M25/M40 86 527 6.3E-12 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Clos_0189 7155b47295217d3dad3790617a3e7acf 548 Gene3D G3DSA:3.40.630.10 5 228 5.8E-31 T 11-10-2018 Clos_0189 7155b47295217d3dad3790617a3e7acf 548 PIRSF PIRSF010386 1 548 1.1E-180 T 11-10-2018 IPR012166 Uncharacterised protein family RocB Clos_1160 5f162f31d340216288ab0e410149636f 322 Pfam PF01522 Polysaccharide deacetylase 99 208 4.5E-26 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Clos_1160 5f162f31d340216288ab0e410149636f 322 Gene3D G3DSA:3.20.20.370 62 312 1.3E-59 T 11-10-2018 Clos_1160 5f162f31d340216288ab0e410149636f 322 SUPERFAMILY SSF88713 100 304 4.7E-49 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Clos_1187 fb7e02c71701484574abc3239f2dbb5c 507 Pfam PF00221 Aromatic amino acid lyase 11 468 4.5E-203 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Clos_1187 fb7e02c71701484574abc3239f2dbb5c 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 502 48.073 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_1187 fb7e02c71701484574abc3239f2dbb5c 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 504 1.2E-219 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_1187 fb7e02c71701484574abc3239f2dbb5c 507 SUPERFAMILY SSF48557 3 499 1.81E-202 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Clos_1187 fb7e02c71701484574abc3239f2dbb5c 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Clos_1187 fb7e02c71701484574abc3239f2dbb5c 507 Gene3D G3DSA:1.10.275.10 2 197 1.7E-73 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Clos_1187 fb7e02c71701484574abc3239f2dbb5c 507 Gene3D G3DSA:1.20.200.10 198 507 2.1E-126 T 11-10-2018 Clos_1251 05aba5eca5e931fb66d48e4f0f28124b 140 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 129 1.9E-45 T 11-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 Clos_1251 05aba5eca5e931fb66d48e4f0f28124b 140 Gene3D G3DSA:3.40.140.10 1 131 1.3E-54 T 11-10-2018 Clos_1251 05aba5eca5e931fb66d48e4f0f28124b 140 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Clos_1251 05aba5eca5e931fb66d48e4f0f28124b 140 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 2.1E-17 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Clos_1251 05aba5eca5e931fb66d48e4f0f28124b 140 SUPERFAMILY SSF53927 3 131 3.68E-48 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Clos_1183 db24c70e2f37d11469a35946b6ad6317 494 Gene3D G3DSA:3.40.640.10 149 369 4.1E-111 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1183 db24c70e2f37d11469a35946b6ad6317 494 Gene3D G3DSA:3.90.1150.10 111 474 4.1E-111 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_1183 db24c70e2f37d11469a35946b6ad6317 494 Pfam PF00155 Aminotransferase class I and II 113 465 2.1E-33 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_1183 db24c70e2f37d11469a35946b6ad6317 494 SMART SM00345 21 80 4.6E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_1183 db24c70e2f37d11469a35946b6ad6317 494 SUPERFAMILY SSF46785 12 82 1.36E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1183 db24c70e2f37d11469a35946b6ad6317 494 Gene3D G3DSA:1.10.10.10 8 81 5.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1183 db24c70e2f37d11469a35946b6ad6317 494 SUPERFAMILY SSF53383 105 477 1.24E-89 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1183 db24c70e2f37d11469a35946b6ad6317 494 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 2.7E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0729 39d94733a2d15a0c51dfdd3659d5b2df 226 Pfam PF00005 ABC transporter 23 169 1.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0729 39d94733a2d15a0c51dfdd3659d5b2df 226 SMART SM00382 32 221 9.3E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0729 39d94733a2d15a0c51dfdd3659d5b2df 226 Gene3D G3DSA:3.40.50.300 1 226 1.1E-65 T 11-10-2018 Clos_0729 39d94733a2d15a0c51dfdd3659d5b2df 226 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0729 39d94733a2d15a0c51dfdd3659d5b2df 226 SUPERFAMILY SSF52540 3 222 4.18E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 SUPERFAMILY SSF57716 10 45 7.13E-12 T 11-10-2018 Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 Gene3D G3DSA:3.40.50.300 53 310 8.6E-109 T 11-10-2018 Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 Gene3D G3DSA:1.10.8.60 311 419 1.2E-38 T 11-10-2018 Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 SMART SM00382 108 261 6.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 410 53.931 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 305 1.3E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 2 406 3.2E-204 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 SMART SM00994 9 48 1.8E-24 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 SUPERFAMILY SSF52540 60 395 1.77E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 Pfam PF06689 ClpX C4-type zinc finger 11 47 1.2E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 312 390 1.1E-17 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 SMART SM01086 312 406 3.9E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Clos_2173 e1f406de02789a5444e90b2fdf1bd55c 426 Gene3D G3DSA:3.30.50.30 2 49 2.0E-22 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Clos_0841 db4fe42c40f023210d60f68c447214da 488 Gene3D G3DSA:3.40.640.10 8 284 2.0E-93 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0841 db4fe42c40f023210d60f68c447214da 488 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 8 323 7.1E-80 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Clos_0841 db4fe42c40f023210d60f68c447214da 488 SUPERFAMILY SSF55904 342 483 1.28E-34 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Clos_0841 db4fe42c40f023210d60f68c447214da 488 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 388 469 8.9E-8 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Clos_0841 db4fe42c40f023210d60f68c447214da 488 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 222 236 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Clos_0841 db4fe42c40f023210d60f68c447214da 488 Gene3D G3DSA:3.90.105.10 419 474 1.9E-18 T 11-10-2018 Clos_0841 db4fe42c40f023210d60f68c447214da 488 SUPERFAMILY SSF53383 8 383 4.17E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2736 1ade8f883e7ec05c0b79745191bb4c7f 157 Gene3D G3DSA:1.10.1660.10 2 55 8.6E-11 T 11-10-2018 Clos_2736 1ade8f883e7ec05c0b79745191bb4c7f 157 Pfam PF12728 Helix-turn-helix domain 5 53 3.3E-14 T 11-10-2018 Clos_2736 1ade8f883e7ec05c0b79745191bb4c7f 157 SUPERFAMILY SSF46955 4 52 2.2E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_2736 1ade8f883e7ec05c0b79745191bb4c7f 157 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 5 53 2.4E-13 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Clos_1945 f7291cd263e4ad2188a2d510ed5847f2 611 SUPERFAMILY SSF90123 22 335 4.19E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1945 f7291cd263e4ad2188a2d510ed5847f2 611 SUPERFAMILY SSF52540 358 600 3.17E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1945 f7291cd263e4ad2188a2d510ed5847f2 611 Gene3D G3DSA:1.20.1560.10 2 339 3.2E-81 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1945 f7291cd263e4ad2188a2d510ed5847f2 611 Pfam PF00664 ABC transporter transmembrane region 35 306 1.7E-41 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_1945 f7291cd263e4ad2188a2d510ed5847f2 611 SMART SM00382 389 575 1.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1945 f7291cd263e4ad2188a2d510ed5847f2 611 Gene3D G3DSA:3.40.50.300 360 609 5.0E-90 T 11-10-2018 Clos_1945 f7291cd263e4ad2188a2d510ed5847f2 611 Pfam PF00005 ABC transporter 380 529 6.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0288 b921bf85ca2bc67a43c05707bbd571d3 526 PIRSF PIRSF005690 19 519 9.6E-187 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Clos_0288 b921bf85ca2bc67a43c05707bbd571d3 526 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 34 504 2.4E-197 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Clos_0875 27b3d39f0d59d71d9d95c0648884b815 295 Pfam PF00795 Carbon-nitrogen hydrolase 6 251 2.3E-46 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Clos_0875 27b3d39f0d59d71d9d95c0648884b815 295 SUPERFAMILY SSF56317 4 252 2.49E-65 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Clos_0875 27b3d39f0d59d71d9d95c0648884b815 295 Gene3D G3DSA:3.60.110.10 1 282 3.4E-73 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 Gene3D G3DSA:3.30.420.40 135 301 1.5E-123 T 11-10-2018 Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 10 320 6.6E-136 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 SUPERFAMILY SSF53067 9 129 1.99E-29 T 11-10-2018 Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 SUPERFAMILY SSF53067 107 319 1.3E-48 T 11-10-2018 Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 82 102 1.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 10 23 1.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 160 181 1.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 137 149 1.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 271 280 1.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 103 122 1.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 Pfam PF00814 Glycoprotease family 29 314 9.7E-103 T 11-10-2018 IPR000905 Gcp-like domain Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 Gene3D G3DSA:3.30.420.40 10 321 1.5E-123 T 11-10-2018 Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 7 339 63.808 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Clos_2467 03ee2f27b25e30f0a93bca45d4a62464 343 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 10 314 1.5E-111 T 11-10-2018 IPR017861 Kae1/TsaD family Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 80 163 3.9E-28 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 74 5.3E-6 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 164 5.1E-31 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 SUPERFAMILY SSF46767 79 165 4.05E-27 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 164 43.488 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 134 140 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 Gene3D G3DSA:3.30.160.70 1 74 1.9E-12 T 11-10-2018 Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 ProSitePatterns PS00626 Regulator of chromosome condensation (RCC1) signature 2. 16 26 - T 11-10-2018 IPR000408 Regulator of chromosome condensation, RCC1 Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 Gene3D G3DSA:1.10.10.10 78 167 2.4E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0145 5bddaa041b91716b8de6ba1d98f09e67 175 SUPERFAMILY SSF53155 2 84 4.71E-16 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Clos_0986 b1c6b62bebe82ecafb934f754f418a9e 376 SMART SM00382 16 176 8.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0986 b1c6b62bebe82ecafb934f754f418a9e 376 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 21 146 6.4E-8 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_0986 b1c6b62bebe82ecafb934f754f418a9e 376 SUPERFAMILY SSF52540 5 176 2.01E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0986 b1c6b62bebe82ecafb934f754f418a9e 376 Gene3D G3DSA:3.40.50.300 4 181 7.0E-18 T 11-10-2018 Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 SUPERFAMILY SSF53697 244 608 1.48E-107 T 11-10-2018 Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 3.5E-247 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 Gene3D G3DSA:3.40.50.10490 446 593 4.3E-145 T 11-10-2018 Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 Pfam PF01380 SIS domain 289 415 2.7E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 Pfam PF01380 SIS domain 464 590 4.4E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 SUPERFAMILY SSF56235 2 234 2.57E-76 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 Gene3D G3DSA:3.40.50.10490 246 607 4.3E-145 T 11-10-2018 Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 Pfam PF13522 Glutamine amidotransferase domain 64 191 1.4E-20 T 11-10-2018 Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 Gene3D G3DSA:3.60.20.10 2 240 2.0E-79 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Clos_2836 2b55c92fb5479b1233bdd82533053a0d 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 40.654 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 11 261 5.4E-89 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 SUPERFAMILY SSF53613 10 268 2.76E-59 T 11-10-2018 IPR029056 Ribokinase-like Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 PIRSF PIRSF000513 5 271 4.1E-92 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 Gene3D G3DSA:3.40.1190.20 2 271 5.2E-99 T 11-10-2018 IPR029056 Ribokinase-like Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 13 263 32.681 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 165 182 1.0E-38 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 32 53 1.0E-38 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 19 26 1.0E-38 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 63 71 1.0E-38 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 89 106 1.0E-38 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 120 134 1.0E-38 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2694 a0d0e8ce40a5dfbe43dfc60a2585746b 271 Pfam PF02110 Hydroxyethylthiazole kinase family 11 258 1.3E-84 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 277 2.5E-94 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 3.8E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 75 93 3.8E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 Pfam PF01926 50S ribosome-binding GTPase 8 122 1.0E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 Pfam PF07650 KH domain 205 283 1.2E-21 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 Hamap MF_00367 GTPase Era [era]. 3 294 37.981 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 Gene3D G3DSA:3.40.50.300 2 182 1.7E-47 T 11-10-2018 Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 SUPERFAMILY SSF52540 8 202 1.51E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 Gene3D G3DSA:3.30.300.20 183 295 1.8E-44 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 165 7.6E-30 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_1252 9ceb2c3466f8c14c7cb40c2cb970eff2 295 SUPERFAMILY SSF54814 178 295 3.79E-42 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 3 431 4.0E-148 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 431 1.1E-130 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 1 433 66.727 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 SMART SM00729 137 355 1.1E-56 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 Pfam PF01938 TRAM domain 367 433 2.5E-6 T 11-10-2018 IPR002792 TRAM domain Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 Gene3D G3DSA:2.40.50.140 370 438 2.5E-14 T 11-10-2018 Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 Gene3D G3DSA:3.80.30.20 135 369 1.6E-88 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 SUPERFAMILY SSF102114 133 361 4.84E-59 T 11-10-2018 Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 Pfam PF00919 Uncharacterized protein family UPF0004 3 99 1.2E-26 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 Gene3D G3DSA:3.40.50.12160 1 134 1.4E-40 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Clos_0582 e100479fd0aac01ad0238fe3d39a58ac 438 Pfam PF04055 Radical SAM superfamily 143 313 1.0E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_2267 d39824a93a43f58b373d7ea8f0102545 274 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 269 3.1E-65 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Clos_2267 d39824a93a43f58b373d7ea8f0102545 274 Gene3D G3DSA:3.40.50.970 1 273 1.2E-113 T 11-10-2018 Clos_2267 d39824a93a43f58b373d7ea8f0102545 274 ProSitePatterns PS00801 Transketolase signature 1. 16 36 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Clos_2267 d39824a93a43f58b373d7ea8f0102545 274 SUPERFAMILY SSF52518 4 271 3.48E-95 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_1217 aa1e23b21318d759f714d8aa47e5b31e 364 SUPERFAMILY SSF52540 21 189 4.89E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1217 aa1e23b21318d759f714d8aa47e5b31e 364 SUPERFAMILY SSF52540 219 256 4.3E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1217 aa1e23b21318d759f714d8aa47e5b31e 364 Gene3D G3DSA:3.40.50.300 19 197 2.5E-5 T 11-10-2018 Clos_1217 aa1e23b21318d759f714d8aa47e5b31e 364 Gene3D G3DSA:3.40.50.300 217 327 1.0E-6 T 11-10-2018 Clos_1389 c7456440fec02c5f89175fe1b34a03cc 107 SUPERFAMILY SSF50346 2 74 8.04E-15 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Clos_1389 c7456440fec02c5f89175fe1b34a03cc 107 Gene3D G3DSA:2.30.30.240 3 77 1.0E-11 T 11-10-2018 Clos_1389 c7456440fec02c5f89175fe1b34a03cc 107 Pfam PF05239 PRC-barrel domain 2 77 9.1E-14 T 11-10-2018 IPR027275 PRC-barrel domain Clos_1389 c7456440fec02c5f89175fe1b34a03cc 107 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 3 76 3.6E-27 T 11-10-2018 IPR014238 Sporulation protein YlmC/YmxH Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 Gene3D G3DSA:1.10.10.10 153 233 1.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 SMART SM00419 176 225 4.6E-15 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 Pfam PF00027 Cyclic nucleotide-binding domain 39 123 4.4E-22 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 SUPERFAMILY SSF51206 15 152 2.23E-37 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 SUPERFAMILY SSF46785 154 232 2.33E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 Gene3D G3DSA:2.60.120.10 5 151 3.2E-37 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 198 8.7E-9 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 213 8.7E-9 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 SMART SM00100 19 137 2.5E-22 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Clos_2178 dd9cc1ce0678334c5fdf4c51cff1a792 233 Pfam PF13545 Crp-like helix-turn-helix domain 158 231 1.3E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Clos_1108 8376d0dbf265553a86e6e3c2c5367523 421 Pfam PF04055 Radical SAM superfamily 63 196 7.0E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1108 8376d0dbf265553a86e6e3c2c5367523 421 PIRSF PIRSF037420 315 411 0.035 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Clos_1108 8376d0dbf265553a86e6e3c2c5367523 421 PIRSF PIRSF037420 55 262 2.6E-29 T 11-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Clos_1108 8376d0dbf265553a86e6e3c2c5367523 421 Pfam PF13394 4Fe-4S single cluster domain 66 146 4.2E-6 T 11-10-2018 Clos_1108 8376d0dbf265553a86e6e3c2c5367523 421 SUPERFAMILY SSF102114 58 387 1.57E-47 T 11-10-2018 Clos_1108 8376d0dbf265553a86e6e3c2c5367523 421 SMART SM00729 59 267 0.0011 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_1108 8376d0dbf265553a86e6e3c2c5367523 421 Pfam PF13186 Iron-sulfur cluster-binding domain 310 391 2.6E-17 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain Clos_1120 d7cc5b22b0be017098537094c926b189 216 PIRSF PIRSF003107 1 216 5.6E-67 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Clos_1120 d7cc5b22b0be017098537094c926b189 216 SUPERFAMILY SSF109755 2 215 2.3E-66 T 11-10-2018 Clos_1120 d7cc5b22b0be017098537094c926b189 216 Gene3D G3DSA:1.20.58.220 1 110 7.6E-32 T 11-10-2018 IPR038078 PhoU-like domain superfamily Clos_1120 d7cc5b22b0be017098537094c926b189 216 Pfam PF01895 PhoU domain 120 204 4.4E-23 T 11-10-2018 IPR026022 PhoU domain Clos_1120 d7cc5b22b0be017098537094c926b189 216 Pfam PF01895 PhoU domain 17 103 7.6E-22 T 11-10-2018 IPR026022 PhoU domain Clos_1120 d7cc5b22b0be017098537094c926b189 216 Gene3D G3DSA:1.20.58.220 111 216 1.5E-39 T 11-10-2018 IPR038078 PhoU-like domain superfamily Clos_1120 d7cc5b22b0be017098537094c926b189 216 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 213 1.8E-62 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Clos_0756 c5a9b6d6a25628281fd1071b92244fac 255 SUPERFAMILY SSF89082 167 253 3.01E-14 T 11-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain Clos_0756 c5a9b6d6a25628281fd1071b92244fac 255 SMART SM00422 6 75 2.1E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0756 c5a9b6d6a25628281fd1071b92244fac 255 Pfam PF13411 MerR HTH family regulatory protein 6 73 3.9E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0756 c5a9b6d6a25628281fd1071b92244fac 255 Gene3D G3DSA:1.10.1660.10 3 140 1.9E-31 T 11-10-2018 Clos_0756 c5a9b6d6a25628281fd1071b92244fac 255 Pfam PF07739 TipAS antibiotic-recognition domain 131 249 8.8E-20 T 11-10-2018 IPR012925 TipAS antibiotic-recognition domain Clos_0756 c5a9b6d6a25628281fd1071b92244fac 255 SUPERFAMILY SSF46955 6 108 2.2E-25 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_1734 3767fd3d98797898191fec60a5ba306f 229 SMART SM00862 150 226 3.4E-30 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_1734 3767fd3d98797898191fec60a5ba306f 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 3.1E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_1734 3767fd3d98797898191fec60a5ba306f 229 SUPERFAMILY SSF52172 2 128 4.7E-42 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1734 3767fd3d98797898191fec60a5ba306f 229 SMART SM00448 3 113 3.4E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1734 3767fd3d98797898191fec60a5ba306f 229 Pfam PF00072 Response regulator receiver domain 5 114 3.9E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1734 3767fd3d98797898191fec60a5ba306f 229 SUPERFAMILY SSF46894 126 227 1.63E-33 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_1734 3767fd3d98797898191fec60a5ba306f 229 Gene3D G3DSA:1.10.10.10 129 229 7.0E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1734 3767fd3d98797898191fec60a5ba306f 229 Gene3D G3DSA:3.40.50.2300 1 128 9.9E-39 T 11-10-2018 Clos_2212 22f8ad3f2650f937a73ccffeb8dd27bd 316 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 316 86.783 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Clos_2212 22f8ad3f2650f937a73ccffeb8dd27bd 316 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 3 309 1.1E-72 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Clos_2212 22f8ad3f2650f937a73ccffeb8dd27bd 316 Pfam PF03186 CobD/Cbib protein 13 302 2.6E-95 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Clos_2684 bbe40d71a4963b1441c784ce12b2b7ea 249 Gene3D G3DSA:3.40.50.300 7 249 6.0E-79 T 11-10-2018 Clos_2684 bbe40d71a4963b1441c784ce12b2b7ea 249 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2684 bbe40d71a4963b1441c784ce12b2b7ea 249 PIRSF PIRSF039085 7 249 6.6E-103 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Clos_2684 bbe40d71a4963b1441c784ce12b2b7ea 249 SMART SM00382 34 221 1.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2684 bbe40d71a4963b1441c784ce12b2b7ea 249 Pfam PF00005 ABC transporter 25 173 4.7E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2684 bbe40d71a4963b1441c784ce12b2b7ea 249 SUPERFAMILY SSF52540 9 243 1.36E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0774 4b8408e77f10b51f964c83b5a0968411 161 SUPERFAMILY SSF52218 1 73 3.49E-5 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_0774 4b8408e77f10b51f964c83b5a0968411 161 ProSitePatterns PS00201 Flavodoxin signature. 3 19 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Clos_0322 2d0afe1d21980c4ff94db19fd319c5c5 244 PRINTS PR00164 ABC-2 type transport system membrane protein signature 189 208 8.5E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Clos_0322 2d0afe1d21980c4ff94db19fd319c5c5 244 PRINTS PR00164 ABC-2 type transport system membrane protein signature 169 188 8.5E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Clos_0322 2d0afe1d21980c4ff94db19fd319c5c5 244 PRINTS PR00164 ABC-2 type transport system membrane protein signature 22 43 8.5E-5 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Clos_0322 2d0afe1d21980c4ff94db19fd319c5c5 244 Pfam PF01061 ABC-2 type transporter 3 210 7.2E-27 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Clos_0322 2d0afe1d21980c4ff94db19fd319c5c5 244 PIRSF PIRSF006648 4 243 3.1E-29 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Clos_1532 b9d988f3d52dd715eab842293092e728 307 Gene3D G3DSA:3.40.50.620 3 184 1.1E-55 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_1532 b9d988f3d52dd715eab842293092e728 307 Gene3D G3DSA:2.40.30.30 185 307 4.6E-40 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Clos_1532 b9d988f3d52dd715eab842293092e728 307 Pfam PF01687 Riboflavin kinase 183 305 7.2E-34 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Clos_1532 b9d988f3d52dd715eab842293092e728 307 SMART SM00904 182 306 2.3E-51 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Clos_1532 b9d988f3d52dd715eab842293092e728 307 Pfam PF06574 FAD synthetase 18 165 1.2E-47 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Clos_1532 b9d988f3d52dd715eab842293092e728 307 PIRSF PIRSF004491 1 307 2.8E-103 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Clos_1532 b9d988f3d52dd715eab842293092e728 307 SUPERFAMILY SSF52374 16 174 4.15E-30 T 11-10-2018 Clos_1532 b9d988f3d52dd715eab842293092e728 307 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 306 2.4E-81 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Clos_1532 b9d988f3d52dd715eab842293092e728 307 SUPERFAMILY SSF82114 172 306 2.45E-43 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Clos_0392 982ddf9688ed714e51fbe29d2ed52656 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 291 1.2E-71 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Clos_0392 982ddf9688ed714e51fbe29d2ed52656 297 SUPERFAMILY SSF160240 215 291 3.66E-18 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Clos_0392 982ddf9688ed714e51fbe29d2ed52656 297 SUPERFAMILY SSF161111 9 209 1.07E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Clos_0392 982ddf9688ed714e51fbe29d2ed52656 297 Gene3D G3DSA:1.20.1510.10 10 208 5.2E-59 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Clos_0392 982ddf9688ed714e51fbe29d2ed52656 297 Pfam PF01545 Cation efflux family 16 207 1.1E-43 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Clos_0392 982ddf9688ed714e51fbe29d2ed52656 297 Gene3D G3DSA:3.30.70.1350 209 292 5.0E-19 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Clos_0392 982ddf9688ed714e51fbe29d2ed52656 297 Pfam PF16916 Dimerisation domain of Zinc Transporter 215 290 7.8E-22 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Clos_0711 68010336697ae596bfd3a57626b505dc 531 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 148 1.0E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_0711 68010336697ae596bfd3a57626b505dc 531 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0711 68010336697ae596bfd3a57626b505dc 531 PRINTS PR00315 GTP-binding elongation factor signature 101 112 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0711 68010336697ae596bfd3a57626b505dc 531 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0711 68010336697ae596bfd3a57626b505dc 531 PRINTS PR00315 GTP-binding elongation factor signature 15 28 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0711 68010336697ae596bfd3a57626b505dc 531 PRINTS PR00315 GTP-binding elongation factor signature 65 73 2.4E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0711 68010336697ae596bfd3a57626b505dc 531 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.7E-7 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Clos_0711 68010336697ae596bfd3a57626b505dc 531 SUPERFAMILY SSF52540 9 274 4.71E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0711 68010336697ae596bfd3a57626b505dc 531 Gene3D G3DSA:3.40.50.300 72 379 1.7E-104 T 11-10-2018 Clos_0711 68010336697ae596bfd3a57626b505dc 531 Pfam PF16658 Class II release factor RF3, C-terminal domain 388 516 1.5E-47 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Clos_0711 68010336697ae596bfd3a57626b505dc 531 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 531 7.8E-214 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Clos_0711 68010336697ae596bfd3a57626b505dc 531 Pfam PF00009 Elongation factor Tu GTP binding domain 12 274 1.4E-52 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Clos_0711 68010336697ae596bfd3a57626b505dc 531 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Clos_0711 68010336697ae596bfd3a57626b505dc 531 SUPERFAMILY SSF54980 394 467 1.12E-13 T 11-10-2018 IPR035647 EF-G domain III/V-like Clos_0711 68010336697ae596bfd3a57626b505dc 531 Gene3D G3DSA:3.40.50.300 110 275 1.7E-104 T 11-10-2018 Clos_0711 68010336697ae596bfd3a57626b505dc 531 SUPERFAMILY SSF50447 262 389 5.3E-26 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Clos_0711 68010336697ae596bfd3a57626b505dc 531 Gene3D G3DSA:3.30.70.3280 391 530 2.4E-46 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Clos_0711 68010336697ae596bfd3a57626b505dc 531 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 529 49.958 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Clos_1398 3652b6d6c2e0395548b0dbecd3b1698f 452 SUPERFAMILY SSF102114 91 249 4.9E-12 T 11-10-2018 Clos_1398 3652b6d6c2e0395548b0dbecd3b1698f 452 Pfam PF04459 Protein of unknown function (DUF512) 224 427 7.4E-77 T 11-10-2018 IPR007549 Domain of unknown function DUF512 Clos_1398 3652b6d6c2e0395548b0dbecd3b1698f 452 SUPERFAMILY SSF50156 9 98 6.84E-10 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Clos_1398 3652b6d6c2e0395548b0dbecd3b1698f 452 Gene3D G3DSA:3.20.20.70 122 278 6.1E-8 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1398 3652b6d6c2e0395548b0dbecd3b1698f 452 Gene3D G3DSA:2.30.42.10 6 80 7.2E-7 T 11-10-2018 Clos_2655 e82436a65830f12df862b8c66ed5a43c 516 Pfam PF03806 AbgT putative transporter family 14 516 1.8E-206 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 Clos_1660 2b6c2725d28aab0c106129ce69633961 554 Gene3D G3DSA:3.60.15.10 9 435 4.0E-193 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1660 2b6c2725d28aab0c106129ce69633961 554 PIRSF PIRSF004803 1 554 4.2E-248 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Clos_1660 2b6c2725d28aab0c106129ce69633961 554 Hamap MF_01491 Ribonuclease J [rnj]. 3 554 48.067 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Clos_1660 2b6c2725d28aab0c106129ce69633961 554 SMART SM00849 20 214 6.2E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_1660 2b6c2725d28aab0c106129ce69633961 554 Gene3D G3DSA:3.40.50.10710 206 364 4.0E-193 T 11-10-2018 Clos_1660 2b6c2725d28aab0c106129ce69633961 554 SUPERFAMILY SSF56281 8 423 4.98E-103 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1660 2b6c2725d28aab0c106129ce69633961 554 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 552 2.3E-206 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 Clos_1660 2b6c2725d28aab0c106129ce69633961 554 Gene3D G3DSA:3.10.20.580 448 554 6.1E-39 T 11-10-2018 Clos_1660 2b6c2725d28aab0c106129ce69633961 554 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 354 406 3.6E-12 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Clos_1660 2b6c2725d28aab0c106129ce69633961 554 Pfam PF00753 Metallo-beta-lactamase superfamily 20 162 1.2E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_1660 2b6c2725d28aab0c106129ce69633961 554 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 363 391 - T 11-10-2018 IPR001587 Ribonuclease J, conserved site Clos_2683 f5a37447b5b2e59010d6eeb1d8efb2c3 225 Gene3D G3DSA:1.10.3720.10 9 223 1.1E-44 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2683 f5a37447b5b2e59010d6eeb1d8efb2c3 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 208 2.4E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2683 f5a37447b5b2e59010d6eeb1d8efb2c3 225 SUPERFAMILY SSF161098 18 212 3.01E-38 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2683 f5a37447b5b2e59010d6eeb1d8efb2c3 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 113 2.5E-18 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Clos_0422 efb37276d34a03767a7f7b1e6a60d171 251 Pfam PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase 10 87 7.5E-35 T 11-10-2018 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 Clos_0422 efb37276d34a03767a7f7b1e6a60d171 251 Gene3D G3DSA:3.40.50.280 91 250 3.7E-47 T 11-10-2018 Clos_0422 efb37276d34a03767a7f7b1e6a60d171 251 SUPERFAMILY SSF117778 22 73 7.72E-21 T 11-10-2018 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily GO:0046983 Clos_0422 efb37276d34a03767a7f7b1e6a60d171 251 Gene3D G3DSA:3.30.30.60 23 73 2.7E-22 T 11-10-2018 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily GO:0046983 Clos_0422 efb37276d34a03767a7f7b1e6a60d171 251 Pfam PF02310 B12 binding domain 111 236 2.8E-20 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_0422 efb37276d34a03767a7f7b1e6a60d171 251 SUPERFAMILY SSF52242 96 248 2.75E-43 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_1064 4f47b0af540da001b20a4885a621d94a 334 Pfam PF02239 Cytochrome D1 heme domain 203 328 3.4E-6 T 11-10-2018 Clos_1064 4f47b0af540da001b20a4885a621d94a 334 Pfam PF02239 Cytochrome D1 heme domain 84 196 2.3E-8 T 11-10-2018 Clos_1064 4f47b0af540da001b20a4885a621d94a 334 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 33 60 3.9E-7 T 11-10-2018 IPR011964 YVTN beta-propeller repeat Clos_1064 4f47b0af540da001b20a4885a621d94a 334 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 290 328 4.1E-8 T 11-10-2018 IPR011964 YVTN beta-propeller repeat Clos_1064 4f47b0af540da001b20a4885a621d94a 334 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 169 200 3.3E-7 T 11-10-2018 IPR011964 YVTN beta-propeller repeat Clos_1064 4f47b0af540da001b20a4885a621d94a 334 Gene3D G3DSA:2.130.10.10 27 130 1.7E-21 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Clos_1064 4f47b0af540da001b20a4885a621d94a 334 SUPERFAMILY SSF50974 4 331 1.1E-72 T 11-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Clos_1064 4f47b0af540da001b20a4885a621d94a 334 Gene3D G3DSA:2.130.10.10 131 332 2.3E-50 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Clos_0059 079405106f863e7190683b55c5514c6a 482 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 8 334 4.6E-74 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Clos_0059 079405106f863e7190683b55c5514c6a 482 SUPERFAMILY SSF53383 8 379 4.26E-76 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_0059 079405106f863e7190683b55c5514c6a 482 SUPERFAMILY SSF55904 341 478 4.58E-28 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Clos_0059 079405106f863e7190683b55c5514c6a 482 Gene3D G3DSA:3.90.100.10 387 480 1.2E-17 T 11-10-2018 Clos_0059 079405106f863e7190683b55c5514c6a 482 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 398 468 2.8E-9 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Clos_0059 079405106f863e7190683b55c5514c6a 482 Gene3D G3DSA:3.40.640.10 50 280 1.2E-103 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0059 079405106f863e7190683b55c5514c6a 482 Gene3D G3DSA:3.90.1150.150 281 378 1.2E-103 T 11-10-2018 Clos_1440 8d8ce16ea6e2b1d17d04dd0d4627bd49 548 SMART SM01120 36 201 8.0E-66 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Clos_1440 8d8ce16ea6e2b1d17d04dd0d4627bd49 548 Gene3D G3DSA:1.25.40.340 6 179 7.3E-11 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Clos_1440 8d8ce16ea6e2b1d17d04dd0d4627bd49 548 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 548 4.0E-205 T 11-10-2018 IPR019986 DAK2 domain-containing protein YloV Clos_1440 8d8ce16ea6e2b1d17d04dd0d4627bd49 548 Pfam PF02734 DAK2 domain 36 198 5.4E-42 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Clos_1440 8d8ce16ea6e2b1d17d04dd0d4627bd49 548 SMART SM01121 232 548 1.2E-172 T 11-10-2018 IPR033470 Uncharacterised protein, DhaK domain Clos_1440 8d8ce16ea6e2b1d17d04dd0d4627bd49 548 SUPERFAMILY SSF101473 6 202 6.02E-45 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Clos_1440 8d8ce16ea6e2b1d17d04dd0d4627bd49 548 Pfam PF13684 Dihydroxyacetone kinase family 232 548 7.9E-127 T 11-10-2018 IPR033470 Uncharacterised protein, DhaK domain Clos_0014 cda96df1e6370190cd70113537836063 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 399 6.6E-35 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_0014 cda96df1e6370190cd70113537836063 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 43.099 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Clos_0014 cda96df1e6370190cd70113537836063 425 SUPERFAMILY SSF55681 117 420 1.02E-103 T 11-10-2018 Clos_0014 cda96df1e6370190cd70113537836063 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 1.4E-174 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Clos_0014 cda96df1e6370190cd70113537836063 425 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 1.2E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Clos_0014 cda96df1e6370190cd70113537836063 425 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 1.2E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Clos_0014 cda96df1e6370190cd70113537836063 425 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 1.2E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Clos_0014 cda96df1e6370190cd70113537836063 425 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 1.2E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Clos_0014 cda96df1e6370190cd70113537836063 425 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.2E-31 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Clos_0014 cda96df1e6370190cd70113537836063 425 Gene3D G3DSA:1.10.287.40 1 105 6.0E-30 T 11-10-2018 Clos_0014 cda96df1e6370190cd70113537836063 425 Gene3D G3DSA:3.30.930.10 106 425 6.3E-125 T 11-10-2018 Clos_0014 cda96df1e6370190cd70113537836063 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 5.4E-32 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Clos_0014 cda96df1e6370190cd70113537836063 425 SUPERFAMILY SSF46589 1 113 4.03E-31 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Clos_0014 cda96df1e6370190cd70113537836063 425 PIRSF PIRSF001529 1 425 6.7E-184 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 Gene3D G3DSA:3.30.230.10 5 169 1.7E-19 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 211 226 2.1E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 344 356 2.1E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 292 306 2.1E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 320 333 2.1E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 SUPERFAMILY SSF52540 192 501 3.11E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 397 1.5E-89 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 500 1.9E-184 T 11-10-2018 IPR004482 Mg chelatase-related protein Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 SMART SM00382 212 394 2.2E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 SUPERFAMILY SSF54211 12 168 8.34E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 405 500 4.3E-32 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 2.5E-48 T 11-10-2018 Clos_1472 0c2a981767e8d9a07d5f219c598e9be7 507 Gene3D G3DSA:3.40.50.300 183 503 7.1E-59 T 11-10-2018 Clos_2092 d0a4f293d135f783afff7189a0d99985 117 Gene3D G3DSA:3.30.70.120 2 111 3.8E-5 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clos_2092 d0a4f293d135f783afff7189a0d99985 117 SUPERFAMILY SSF54913 8 112 3.04E-10 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 Pfam PF12848 ABC transporter 230 318 2.2E-18 T 11-10-2018 IPR032781 ABC-transporter extension domain Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 Pfam PF00005 ABC transporter 351 477 5.9E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 Pfam PF00005 ABC transporter 20 191 1.6E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 Gene3D G3DSA:3.40.50.300 5 282 1.6E-64 T 11-10-2018 Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 SMART SM00382 28 236 1.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 SMART SM00382 357 522 3.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 SUPERFAMILY SSF52540 6 256 1.05E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 SUPERFAMILY SSF52540 324 526 1.9E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 Pfam PF16326 ABC transporter C-terminal domain 573 627 5.7E-9 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Clos_2299 b8130eddd5bc6e5cff380f2bee25799c 635 Gene3D G3DSA:3.40.50.300 295 559 6.7E-58 T 11-10-2018 Clos_1685 c7b8d4cf03aac3d3ec23aef3e234508c 116 SUPERFAMILY SSF82771 18 85 7.72E-7 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Clos_1685 c7b8d4cf03aac3d3ec23aef3e234508c 116 Gene3D G3DSA:3.40.1440.10 17 112 2.3E-16 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Clos_2599 f69479ad8ec5b3a554ccb9c2ae0660f3 454 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2599 f69479ad8ec5b3a554ccb9c2ae0660f3 454 SUPERFAMILY SSF161070 10 448 6.8E-149 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Clos_2599 f69479ad8ec5b3a554ccb9c2ae0660f3 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 124 2.8E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2599 f69479ad8ec5b3a554ccb9c2ae0660f3 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 448 9.7E-43 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2599 f69479ad8ec5b3a554ccb9c2ae0660f3 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 5.8E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2599 f69479ad8ec5b3a554ccb9c2ae0660f3 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 5.8E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2599 f69479ad8ec5b3a554ccb9c2ae0660f3 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 5.8E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2599 f69479ad8ec5b3a554ccb9c2ae0660f3 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 5.8E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_1274 e2c19f6d85c5e041a0db5cf9c6f40a59 73 SUPERFAMILY SSF47413 1 68 1.07E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1274 e2c19f6d85c5e041a0db5cf9c6f40a59 73 Gene3D G3DSA:1.10.260.40 4 69 7.9E-11 T 11-10-2018 Clos_1274 e2c19f6d85c5e041a0db5cf9c6f40a59 73 SMART SM00530 6 62 3.4E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1274 e2c19f6d85c5e041a0db5cf9c6f40a59 73 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 6.7E-24 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_2144 1ba8502d1e4f608d66df6ba37f632969 220 Gene3D G3DSA:3.30.70.20 55 218 5.4E-27 T 11-10-2018 Clos_2144 1ba8502d1e4f608d66df6ba37f632969 220 Pfam PF12800 4Fe-4S binding domain 65 78 0.14 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2144 1ba8502d1e4f608d66df6ba37f632969 220 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 158 169 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2144 1ba8502d1e4f608d66df6ba37f632969 220 SUPERFAMILY SSF54862 64 214 1.67E-39 T 11-10-2018 Clos_2144 1ba8502d1e4f608d66df6ba37f632969 220 Pfam PF13247 4Fe-4S dicluster domain 118 194 4.1E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0140 fefea184c5d620a6277b4b64969fd8cc 442 Gene3D G3DSA:2.40.420.20 48 425 1.4E-43 T 11-10-2018 Clos_0140 fefea184c5d620a6277b4b64969fd8cc 442 Pfam PF13533 Biotin-lipoyl like 75 111 7.3E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Clos_0140 fefea184c5d620a6277b4b64969fd8cc 442 Gene3D G3DSA:2.40.30.170 52 364 1.4E-43 T 11-10-2018 Clos_0140 fefea184c5d620a6277b4b64969fd8cc 442 Pfam PF13437 HlyD family secretion protein 246 347 1.6E-12 T 11-10-2018 Clos_0140 fefea184c5d620a6277b4b64969fd8cc 442 Gene3D G3DSA:1.10.287.470 97 246 1.4E-43 T 11-10-2018 Clos_0140 fefea184c5d620a6277b4b64969fd8cc 442 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 178 440 3.7E-29 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Clos_0140 fefea184c5d620a6277b4b64969fd8cc 442 Gene3D G3DSA:2.40.50.100 63 283 1.4E-43 T 11-10-2018 Clos_2024 06a75257b9493acdef3174e99373b0ff 317 Pfam PF02690 Na+/Pi-cotransporter 14 149 1.2E-40 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Clos_2024 06a75257b9493acdef3174e99373b0ff 317 Pfam PF02690 Na+/Pi-cotransporter 144 252 1.6E-14 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Clos_2024 06a75257b9493acdef3174e99373b0ff 317 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 11 309 6.8E-64 T 11-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 Clos_0227 8271ad33a609066b4e123e96424dee81 299 Gene3D G3DSA:3.40.800.10 1 298 9.5E-94 T 11-10-2018 Clos_0227 8271ad33a609066b4e123e96424dee81 299 SUPERFAMILY SSF52768 1 294 2.88E-76 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily Clos_0227 8271ad33a609066b4e123e96424dee81 299 Pfam PF00491 Arginase family 2 294 6.0E-65 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Clos_0227 8271ad33a609066b4e123e96424dee81 299 PIRSF PIRSF036979 1 297 6.6E-33 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Clos_0227 8271ad33a609066b4e123e96424dee81 299 TIGRFAM TIGR01229 rocF_arginase: arginase 5 294 1.8E-76 T 11-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 Clos_0227 8271ad33a609066b4e123e96424dee81 299 PRINTS PR00116 Arginase signature 222 251 1.7E-37 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Clos_0227 8271ad33a609066b4e123e96424dee81 299 PRINTS PR00116 Arginase signature 257 271 1.7E-37 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Clos_0227 8271ad33a609066b4e123e96424dee81 299 PRINTS PR00116 Arginase signature 172 190 1.7E-37 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Clos_0227 8271ad33a609066b4e123e96424dee81 299 PRINTS PR00116 Arginase signature 118 145 1.7E-37 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Clos_0227 8271ad33a609066b4e123e96424dee81 299 PRINTS PR00116 Arginase signature 95 110 1.7E-37 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 SUPERFAMILY SSF56425 382 527 5.53E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 Pfam PF04205 FMN-binding domain 51 122 2.1E-12 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 SMART SM00900 51 124 1.1E-13 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 Gene3D G3DSA:3.50.50.60 145 581 1.2E-166 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 Gene3D G3DSA:3.90.1010.20 55 136 2.7E-6 T 11-10-2018 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 146 579 2.6E-154 T 11-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 Pfam PF00890 FAD binding domain 146 567 2.4E-99 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 166 3.8E-5 T 11-10-2018 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 531 553 3.8E-5 T 11-10-2018 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 Gene3D G3DSA:3.90.700.10 379 523 1.2E-166 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_0390 3384f01e6236acf564c1e7b38cdc6a43 587 SUPERFAMILY SSF51905 138 586 1.27E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2342 d7343d779423d01773ff7744b794ea56 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_2342 d7343d779423d01773ff7744b794ea56 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_2342 d7343d779423d01773ff7744b794ea56 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_2342 d7343d779423d01773ff7744b794ea56 297 SUPERFAMILY SSF53850 87 269 1.19E-8 T 11-10-2018 Clos_2342 d7343d779423d01773ff7744b794ea56 297 Gene3D G3DSA:1.10.10.10 1 87 4.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2342 d7343d779423d01773ff7744b794ea56 297 SUPERFAMILY SSF46785 2 93 5.64E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2342 d7343d779423d01773ff7744b794ea56 297 Gene3D G3DSA:3.40.190.290 90 284 1.3E-5 T 11-10-2018 Clos_2342 d7343d779423d01773ff7744b794ea56 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.0E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Clos_1469 56efb0b36b31f0f1b71ea83691b4d1eb 280 PIRSF PIRSF006230 1 280 3.2E-101 T 11-10-2018 IPR016478 GTPase, MTG1 Clos_1469 56efb0b36b31f0f1b71ea83691b4d1eb 280 Gene3D G3DSA:3.40.50.300 12 179 1.3E-48 T 11-10-2018 Clos_1469 56efb0b36b31f0f1b71ea83691b4d1eb 280 Pfam PF01926 50S ribosome-binding GTPase 122 195 6.2E-17 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1469 56efb0b36b31f0f1b71ea83691b4d1eb 280 SUPERFAMILY SSF52540 9 256 2.12E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1469 56efb0b36b31f0f1b71ea83691b4d1eb 280 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 169 184 1.2E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1469 56efb0b36b31f0f1b71ea83691b4d1eb 280 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 123 143 1.2E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1469 56efb0b36b31f0f1b71ea83691b4d1eb 280 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 2.4E-110 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis Clos_1469 56efb0b36b31f0f1b71ea83691b4d1eb 280 Gene3D G3DSA:1.10.1580.10 180 272 8.7E-30 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Clos_0052 21871cd12031c3a3d937ffc9cfc060bb 495 Gene3D G3DSA:3.30.450.20 390 491 1.9E-18 T 11-10-2018 Clos_0052 21871cd12031c3a3d937ffc9cfc060bb 495 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 259 288 4.2E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Clos_0052 21871cd12031c3a3d937ffc9cfc060bb 495 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 211 240 4.2E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Clos_0052 21871cd12031c3a3d937ffc9cfc060bb 495 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 182 209 4.2E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Clos_0052 21871cd12031c3a3d937ffc9cfc060bb 495 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 163 309 1.8E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0052 21871cd12031c3a3d937ffc9cfc060bb 495 SMART SM00283 70 359 1.3E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0052 21871cd12031c3a3d937ffc9cfc060bb 495 SUPERFAMILY SSF103190 376 494 1.75E-13 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Clos_0052 21871cd12031c3a3d937ffc9cfc060bb 495 Gene3D G3DSA:1.10.287.950 5 300 9.3E-53 T 11-10-2018 Clos_0052 21871cd12031c3a3d937ffc9cfc060bb 495 SUPERFAMILY SSF58104 23 358 1.03E-59 T 11-10-2018 Clos_2128 473a7a2c4a794e513ab55b33163b2268 603 Gene3D G3DSA:3.90.1520.10 1 188 1.2E-58 T 11-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 Clos_2128 473a7a2c4a794e513ab55b33163b2268 603 Pfam PF07700 Haem-NO-binding 2 159 7.8E-38 T 11-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 Clos_2128 473a7a2c4a794e513ab55b33163b2268 603 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 395 550 2.4E-28 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2128 473a7a2c4a794e513ab55b33163b2268 603 Gene3D G3DSA:1.10.287.950 245 589 4.4E-52 T 11-10-2018 Clos_2128 473a7a2c4a794e513ab55b33163b2268 603 SMART SM00283 327 588 1.5E-27 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2128 473a7a2c4a794e513ab55b33163b2268 603 SUPERFAMILY SSF111126 1 177 3.82E-38 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Clos_2128 473a7a2c4a794e513ab55b33163b2268 603 SUPERFAMILY SSF58104 267 602 4.19E-53 T 11-10-2018 Clos_2074 a2971f1539b9c0728dfca2154c4b37bb 368 Pfam PF01098 Cell cycle protein 16 363 1.8E-100 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_2074 a2971f1539b9c0728dfca2154c4b37bb 368 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 6 366 26.38 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_2074 a2971f1539b9c0728dfca2154c4b37bb 368 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 12 363 9.5E-122 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_0671 a2ae1f851490f0b32852c2ce3ea867c6 414 SUPERFAMILY SSF54631 199 342 2.4E-31 T 11-10-2018 Clos_0671 a2ae1f851490f0b32852c2ce3ea867c6 414 Pfam PF00571 CBS domain 210 258 6.2E-4 T 11-10-2018 IPR000644 CBS domain Clos_0671 a2ae1f851490f0b32852c2ce3ea867c6 414 Pfam PF00571 CBS domain 282 323 1.4E-5 T 11-10-2018 IPR000644 CBS domain Clos_0671 a2ae1f851490f0b32852c2ce3ea867c6 414 Gene3D G3DSA:3.10.580.10 183 330 9.8E-55 T 11-10-2018 Clos_0671 a2ae1f851490f0b32852c2ce3ea867c6 414 Pfam PF01595 Domain of unknown function DUF21 11 189 2.1E-53 T 11-10-2018 IPR002550 CNNM, transmembrane domain Clos_0671 a2ae1f851490f0b32852c2ce3ea867c6 414 Pfam PF03471 Transporter associated domain 341 413 9.2E-22 T 11-10-2018 IPR005170 Transporter-associated domain Clos_0671 a2ae1f851490f0b32852c2ce3ea867c6 414 SMART SM01091 338 414 3.0E-22 T 11-10-2018 IPR005170 Transporter-associated domain Clos_0671 a2ae1f851490f0b32852c2ce3ea867c6 414 Gene3D G3DSA:3.30.465.10 331 414 5.1E-26 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Clos_0671 a2ae1f851490f0b32852c2ce3ea867c6 414 SUPERFAMILY SSF56176 336 413 7.09E-22 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Clos_2412 1d05fb7443b7ba42f1d7657b4817c61d 223 Gene3D G3DSA:3.40.50.300 9 203 2.6E-10 T 11-10-2018 Clos_2412 1d05fb7443b7ba42f1d7657b4817c61d 223 SUPERFAMILY SSF52540 3 200 1.19E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2412 1d05fb7443b7ba42f1d7657b4817c61d 223 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 15 168 1.6E-7 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Clos_0483 c435bea838ffed6f2e82639d62d48a3c 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 3.3E-31 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0483 c435bea838ffed6f2e82639d62d48a3c 121 Gene3D G3DSA:3.30.1390.10 52 121 8.0E-32 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Clos_0483 c435bea838ffed6f2e82639d62d48a3c 121 Gene3D G3DSA:1.20.5.710 1 51 4.4E-20 T 11-10-2018 Clos_0483 c435bea838ffed6f2e82639d62d48a3c 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 4.0E-21 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0483 c435bea838ffed6f2e82639d62d48a3c 121 SUPERFAMILY SSF54736 50 121 1.01E-25 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Clos_0483 c435bea838ffed6f2e82639d62d48a3c 121 SUPERFAMILY SSF48300 1 57 1.57E-16 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0483 c435bea838ffed6f2e82639d62d48a3c 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 47 1.9E-18 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0483 c435bea838ffed6f2e82639d62d48a3c 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 121 25.146 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0483 c435bea838ffed6f2e82639d62d48a3c 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 121 2.7E-47 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2487 d7fadbb0abe6a7bc2a643994f5bf52cb 181 SUPERFAMILY SSF69754 2 98 5.62E-32 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Clos_2487 d7fadbb0abe6a7bc2a643994f5bf52cb 181 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 2.1E-27 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Clos_2487 d7fadbb0abe6a7bc2a643994f5bf52cb 181 Gene3D G3DSA:3.30.505.50 131 176 8.5E-26 T 11-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Clos_2487 d7fadbb0abe6a7bc2a643994f5bf52cb 181 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.3E-28 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Clos_2487 d7fadbb0abe6a7bc2a643994f5bf52cb 181 Gene3D G3DSA:3.30.160.100 1 105 5.3E-33 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Clos_2487 d7fadbb0abe6a7bc2a643994f5bf52cb 181 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 119 173 3.0E-29 T 11-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Clos_2487 d7fadbb0abe6a7bc2a643994f5bf52cb 181 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 177 24.5 T 11-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid Clos_1057 6008b6d8000742757e82a8ddd3794f18 281 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 239 3.6E-47 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Clos_1057 6008b6d8000742757e82a8ddd3794f18 281 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 232 1.5E-59 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Clos_1057 6008b6d8000742757e82a8ddd3794f18 281 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 239 13.726 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Clos_1657 ce8185fb308a5a17c715248d652a4613 231 Gene3D G3DSA:3.40.50.150 21 231 6.2E-62 T 11-10-2018 Clos_1657 ce8185fb308a5a17c715248d652a4613 231 SUPERFAMILY SSF53335 24 228 2.71E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1657 ce8185fb308a5a17c715248d652a4613 231 Pfam PF01596 O-methyltransferase 56 230 1.1E-35 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 Clos_1815 1e89ec3fcc2eb1e488c18487b4a088e1 203 Pfam PF02589 LUD domain 5 197 9.2E-48 T 11-10-2018 IPR003741 LUD domain Clos_1815 1e89ec3fcc2eb1e488c18487b4a088e1 203 SUPERFAMILY SSF100950 2 145 1.09E-5 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_1815 1e89ec3fcc2eb1e488c18487b4a088e1 203 PIRSF PIRSF020269 1 203 4.8E-64 T 11-10-2018 IPR009501 Uncharacterised conserved protein UCP020269 Clos_0526 af8dd835069b45fafe748d470af95b82 248 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 239 1.1E-65 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0526 af8dd835069b45fafe748d470af95b82 248 Gene3D G3DSA:3.30.70.580 1 105 8.7E-36 T 11-10-2018 Clos_0526 af8dd835069b45fafe748d470af95b82 248 SUPERFAMILY SSF55120 1 245 4.32E-85 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0526 af8dd835069b45fafe748d470af95b82 248 Pfam PF01416 tRNA pseudouridine synthase 9 104 2.3E-11 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0526 af8dd835069b45fafe748d470af95b82 248 Pfam PF01416 tRNA pseudouridine synthase 143 245 2.9E-26 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0526 af8dd835069b45fafe748d470af95b82 248 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 35.998 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0526 af8dd835069b45fafe748d470af95b82 248 PIRSF PIRSF001430 1 248 9.6E-79 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0526 af8dd835069b45fafe748d470af95b82 248 Gene3D G3DSA:3.30.70.660 106 242 1.5E-46 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Clos_2565 137e5d149ba6c2901dbfd809ccadb301 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 81 1.3E-20 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Clos_2565 137e5d149ba6c2901dbfd809ccadb301 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 44 65 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2565 137e5d149ba6c2901dbfd809ccadb301 88 SUPERFAMILY SSF81333 9 83 5.75E-21 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Clos_2565 137e5d149ba6c2901dbfd809ccadb301 88 Pfam PF00137 ATP synthase subunit C 16 78 1.7E-18 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Clos_2565 137e5d149ba6c2901dbfd809ccadb301 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 11 79 15.638 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2565 137e5d149ba6c2901dbfd809ccadb301 88 Gene3D G3DSA:1.20.20.10 5 82 3.4E-33 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2565 137e5d149ba6c2901dbfd809ccadb301 88 PRINTS PR00124 ATP synthase C subunit signature 16 35 6.4E-20 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2565 137e5d149ba6c2901dbfd809ccadb301 88 PRINTS PR00124 ATP synthase C subunit signature 37 52 6.4E-20 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2565 137e5d149ba6c2901dbfd809ccadb301 88 PRINTS PR00124 ATP synthase C subunit signature 54 79 6.4E-20 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2318 124ffc4f0c23495d334255c2264acd96 252 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 250 5.0E-100 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Clos_2318 124ffc4f0c23495d334255c2264acd96 252 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Clos_2318 124ffc4f0c23495d334255c2264acd96 252 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 250 5.5E-97 T 11-10-2018 Clos_2318 124ffc4f0c23495d334255c2264acd96 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 243 2.3E-22 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Clos_2318 124ffc4f0c23495d334255c2264acd96 252 SUPERFAMILY SSF56219 3 251 1.96E-81 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Clos_2318 124ffc4f0c23495d334255c2264acd96 252 Gene3D G3DSA:3.60.10.10 1 250 1.0E-96 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Clos_2113 a2196f36a4e1a1cdbefc74c15192cf45 202 Pfam PF12804 MobA-like NTP transferase domain 8 151 4.8E-28 T 11-10-2018 IPR025877 MobA-like NTP transferase Clos_2113 a2196f36a4e1a1cdbefc74c15192cf45 202 SUPERFAMILY SSF53448 6 188 3.47E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_2113 a2196f36a4e1a1cdbefc74c15192cf45 202 Gene3D G3DSA:3.90.550.10 1 198 2.0E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_2113 a2196f36a4e1a1cdbefc74c15192cf45 202 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 195 20.917 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Clos_0386 321d37602cd5b94001df3c0c757b0214 138 Gene3D G3DSA:3.10.129.10 1 133 2.8E-23 T 11-10-2018 Clos_0386 321d37602cd5b94001df3c0c757b0214 138 SUPERFAMILY SSF54637 4 117 7.67E-23 T 11-10-2018 IPR029069 HotDog domain superfamily Clos_0386 321d37602cd5b94001df3c0c757b0214 138 Pfam PF03061 Thioesterase superfamily 18 90 7.9E-5 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Clos_2398 1b7b6e8b941d75fdabd2a85c8d67b55c 849 TIGRFAM TIGR04394 choline_CutC: choline trimethylamine-lyase 61 849 0.0 T 11-10-2018 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 Clos_2398 1b7b6e8b941d75fdabd2a85c8d67b55c 849 Pfam PF02901 Pyruvate formate lyase-like 62 710 6.1E-232 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Clos_2398 1b7b6e8b941d75fdabd2a85c8d67b55c 849 ProSitePatterns PS00850 Glycine radical domain signature. 819 827 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Clos_2398 1b7b6e8b941d75fdabd2a85c8d67b55c 849 Gene3D G3DSA:3.20.70.40 53 849 0.0 T 11-10-2018 Clos_2398 1b7b6e8b941d75fdabd2a85c8d67b55c 849 Pfam PF01228 Glycine radical 727 830 2.7E-26 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 Clos_2398 1b7b6e8b941d75fdabd2a85c8d67b55c 849 Hamap MF_02058 Choline trimethylamine-lyase [cutC]. 57 849 57.672 T 11-10-2018 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 Clos_2398 1b7b6e8b941d75fdabd2a85c8d67b55c 849 SUPERFAMILY SSF51998 61 846 1.25E-235 T 11-10-2018 Clos_1664 a7b31a89051bc9bbe4c8eebb6a97255f 722 SUPERFAMILY SSF53649 34 348 3.4E-9 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 521 1.0E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 Pfam PF00512 His Kinase A (phospho-acceptor) domain 299 364 3.2E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 Gene3D G3DSA:3.30.565.10 364 521 1.4E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 520 2.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 2.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 501 2.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 SUPERFAMILY SSF158472 244 295 5.36E-9 T 11-10-2018 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 SMART SM00304 244 297 3.3E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 SUPERFAMILY SSF47384 281 365 3.73E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 Gene3D G3DSA:1.10.287.130 248 363 8.6E-33 T 11-10-2018 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 SUPERFAMILY SSF55874 355 521 2.49E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 SMART SM00388 298 365 3.4E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 Pfam PF00672 HAMP domain 244 293 1.2E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0944 052cb8d9ea3494b409f70e017d9e1523 524 SMART SM00387 408 523 1.3E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2380 b6a826c5ac058d68d78f320745ed4d24 340 Gene3D G3DSA:3.40.50.2300 144 334 4.1E-90 T 11-10-2018 Clos_2380 b6a826c5ac058d68d78f320745ed4d24 340 Gene3D G3DSA:3.40.50.2300 49 297 4.1E-90 T 11-10-2018 Clos_2380 b6a826c5ac058d68d78f320745ed4d24 340 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 41 337 5.1E-69 T 11-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 Clos_2380 b6a826c5ac058d68d78f320745ed4d24 340 SUPERFAMILY SSF53822 42 269 9.89E-5 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Clos_0743 c74a5b9ae05fd9f8b44c677204c31faf 336 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 4 336 1.4E-150 T 11-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 Clos_0743 c74a5b9ae05fd9f8b44c677204c31faf 336 Gene3D G3DSA:3.40.50.12110 2 110 6.5E-32 T 11-10-2018 Clos_0743 c74a5b9ae05fd9f8b44c677204c31faf 336 SUPERFAMILY SSF102114 80 282 1.43E-6 T 11-10-2018 Clos_0743 c74a5b9ae05fd9f8b44c677204c31faf 336 Gene3D G3DSA:3.80.30.30 111 336 1.8E-86 T 11-10-2018 Clos_1318 d379971d84750086c5c99fe8c1dc9df0 984 Gene3D G3DSA:3.40.50.300 48 272 2.0E-11 T 11-10-2018 Clos_1318 d379971d84750086c5c99fe8c1dc9df0 984 SUPERFAMILY SSF52540 50 286 6.69E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1318 d379971d84750086c5c99fe8c1dc9df0 984 SUPERFAMILY SSF52540 76 563 7.36E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1318 d379971d84750086c5c99fe8c1dc9df0 984 Pfam PF04851 Type III restriction enzyme, res subunit 10 254 1.3E-23 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Clos_1318 d379971d84750086c5c99fe8c1dc9df0 984 Gene3D G3DSA:3.40.50.300 354 602 4.7E-7 T 11-10-2018 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 449 594 3.5E-30 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 Gene3D G3DSA:3.30.450.20 184 269 1.8E-30 T 11-10-2018 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 Gene3D G3DSA:1.20.1480.50 275 359 5.0E-11 T 11-10-2018 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 Gene3D G3DSA:3.30.450.20 81 183 1.8E-30 T 11-10-2018 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 SMART SM00304 305 357 3.9E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 Pfam PF02743 Cache domain 43 267 9.1E-27 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 Pfam PF00672 HAMP domain 307 349 3.5E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 SUPERFAMILY SSF58104 325 660 4.58E-53 T 11-10-2018 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 Gene3D G3DSA:1.10.287.950 360 661 2.0E-44 T 11-10-2018 Clos_0265 f0f012aba4e1f5ff15b729b2b003b0f7 705 SMART SM00283 386 661 6.7E-22 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 29.145 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 Gene3D G3DSA:1.10.150.20 66 138 7.9E-27 T 11-10-2018 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 Gene3D G3DSA:1.10.8.10 146 192 1.9E-11 T 11-10-2018 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 Pfam PF01330 RuvA N terminal domain 1 61 9.6E-21 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 1.8E-46 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 Pfam PF07499 RuvA, C-terminal domain 151 193 1.1E-13 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 Pfam PF14520 Helix-hairpin-helix domain 71 129 2.9E-18 T 11-10-2018 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 SUPERFAMILY SSF50249 1 62 3.14E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1726 6fa59024eefa4cc98f47631820142c34 194 Gene3D G3DSA:2.40.50.140 1 64 1.5E-22 T 11-10-2018 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 SUPERFAMILY SSF46929 150 193 2.88E-10 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily Clos_1726 6fa59024eefa4cc98f47631820142c34 194 SMART SM00278 107 126 0.33 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 SMART SM00278 72 91 66.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_1726 6fa59024eefa4cc98f47631820142c34 194 SUPERFAMILY SSF47781 65 135 2.04E-20 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_1351 0692a98b53cdd8ced651eb50148be78c 323 SUPERFAMILY SSF52540 5 249 1.09E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1351 0692a98b53cdd8ced651eb50148be78c 323 Gene3D G3DSA:3.40.50.300 3 323 1.0E-99 T 11-10-2018 Clos_1351 0692a98b53cdd8ced651eb50148be78c 323 SMART SM00382 34 227 6.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1351 0692a98b53cdd8ced651eb50148be78c 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 227 314 2.9E-28 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_1351 0692a98b53cdd8ced651eb50148be78c 323 Pfam PF00005 ABC transporter 26 177 7.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1351 0692a98b53cdd8ced651eb50148be78c 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 294 1.4E-15 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_2082 64ed254a942f1ceb5b618e7a03dd59c9 255 Pfam PF00005 ABC transporter 25 173 3.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2082 64ed254a942f1ceb5b618e7a03dd59c9 255 SMART SM00382 34 221 3.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2082 64ed254a942f1ceb5b618e7a03dd59c9 255 SUPERFAMILY SSF52540 3 226 1.77E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2082 64ed254a942f1ceb5b618e7a03dd59c9 255 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2082 64ed254a942f1ceb5b618e7a03dd59c9 255 Gene3D G3DSA:3.40.50.300 1 247 1.2E-65 T 11-10-2018 Clos_0605 50400f7e3c4f61c7d4cee53b5bb3e19f 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 29 6.6E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_0605 50400f7e3c4f61c7d4cee53b5bb3e19f 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_0605 50400f7e3c4f61c7d4cee53b5bb3e19f 146 Gene3D G3DSA:3.30.700.10 12 133 5.3E-5 T 11-10-2018 Clos_0605 50400f7e3c4f61c7d4cee53b5bb3e19f 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 6.4E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_0605 50400f7e3c4f61c7d4cee53b5bb3e19f 146 SUPERFAMILY SSF54523 12 86 5.65E-6 T 11-10-2018 Clos_0828 424e7f2fa0eda368a58f8c23889e0866 186 Pfam PF02417 Chromate transporter 7 182 2.3E-41 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Clos_0161 8274385ebd07b2ed6edf98e0b43aaf4c 514 Gene3D G3DSA:1.25.40.10 17 191 1.3E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_0161 8274385ebd07b2ed6edf98e0b43aaf4c 514 Gene3D G3DSA:1.25.40.10 430 511 1.6E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_0161 8274385ebd07b2ed6edf98e0b43aaf4c 514 Pfam PF13174 Tetratricopeptide repeat 468 502 0.11 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_0161 8274385ebd07b2ed6edf98e0b43aaf4c 514 SUPERFAMILY SSF49452 208 306 7.45E-7 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Clos_0481 68be456b9a74b8dcba000d350560599a 232 Gene3D G3DSA:3.30.190.20 21 226 1.5E-85 T 11-10-2018 Clos_0481 68be456b9a74b8dcba000d350560599a 232 PIRSF PIRSF002155 1 227 2.5E-84 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0481 68be456b9a74b8dcba000d350560599a 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 221 9.2E-59 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Clos_0481 68be456b9a74b8dcba000d350560599a 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 7.1E-105 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Clos_0481 68be456b9a74b8dcba000d350560599a 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 140 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0481 68be456b9a74b8dcba000d350560599a 232 Gene3D G3DSA:3.40.50.790 68 160 1.5E-85 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Clos_0481 68be456b9a74b8dcba000d350560599a 232 SUPERFAMILY SSF56808 6 226 1.57E-85 T 11-10-2018 IPR023674 Ribosomal protein L1-like Clos_0481 68be456b9a74b8dcba000d350560599a 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 230 44.389 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Clos_0599 02298920dff1bee0954d40cf94e30169 324 SUPERFAMILY SSF50022 2 118 1.44E-29 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Clos_0599 02298920dff1bee0954d40cf94e30169 324 SUPERFAMILY SSF55961 99 321 1.37E-26 T 11-10-2018 Clos_0599 02298920dff1bee0954d40cf94e30169 324 Gene3D G3DSA:3.30.530.90 137 314 2.4E-7 T 11-10-2018 Clos_0599 02298920dff1bee0954d40cf94e30169 324 Pfam PF00355 Rieske [2Fe-2S] domain 5 87 4.9E-19 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Clos_0599 02298920dff1bee0954d40cf94e30169 324 Gene3D G3DSA:2.102.10.10 2 134 2.1E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 4.7E-28 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 1.4E-30 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 377 1.6E-49 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 SUPERFAMILY SSF47203 226 378 2.26E-57 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 SUPERFAMILY SSF56645 1 239 1.31E-84 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 Gene3D G3DSA:1.20.140.10 234 378 9.7E-53 T 11-10-2018 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 Gene3D G3DSA:1.10.540.10 1 118 8.6E-38 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 PIRSF PIRSF016578 6 365 4.0E-23 T 11-10-2018 Clos_0168 3e49c82364e66e504ca1f559303ca19a 378 Gene3D G3DSA:2.40.110.10 120 233 2.5E-45 T 11-10-2018 Clos_0577 81f63c0574100da6ce45168023dab06b 140 SUPERFAMILY SSF55811 5 132 1.35E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_0577 81f63c0574100da6ce45168023dab06b 140 Pfam PF00293 NUDIX domain 9 121 2.0E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_0577 81f63c0574100da6ce45168023dab06b 140 Gene3D G3DSA:3.90.79.10 5 138 3.8E-28 T 11-10-2018 Clos_0577 81f63c0574100da6ce45168023dab06b 140 PRINTS PR00502 NUDIX hydrolase family signature 27 41 7.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Clos_0577 81f63c0574100da6ce45168023dab06b 140 PRINTS PR00502 NUDIX hydrolase family signature 41 56 7.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Clos_2245 224a6b1aab4a7b32866b6c848806235c 188 SMART SM00793 3 188 1.2E-7 T 11-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Clos_2245 224a6b1aab4a7b32866b6c848806235c 188 Pfam PF04647 Accessory gene regulator B 8 181 9.1E-33 T 11-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Clos_1637 530d90a8a68e3eb130844e06e8d49603 350 Gene3D G3DSA:3.40.50.300 102 350 1.4E-101 T 11-10-2018 Clos_1637 530d90a8a68e3eb130844e06e8d49603 350 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 4.2E-147 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Clos_1637 530d90a8a68e3eb130844e06e8d49603 350 Pfam PF00437 Type II/IV secretion system protein 116 268 9.9E-43 T 11-10-2018 IPR001482 Type II/IV secretion system protein Clos_1637 530d90a8a68e3eb130844e06e8d49603 350 Gene3D G3DSA:3.30.450.90 1 100 1.9E-32 T 11-10-2018 Clos_1637 530d90a8a68e3eb130844e06e8d49603 350 SMART SM00382 122 247 6.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1637 530d90a8a68e3eb130844e06e8d49603 350 SUPERFAMILY SSF52540 5 335 1.11E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1637 530d90a8a68e3eb130844e06e8d49603 350 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Clos_0799 8c84b5b24e04336f6c8ba285c46ae358 217 SUPERFAMILY SSF143414 155 210 3.79E-5 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_0799 8c84b5b24e04336f6c8ba285c46ae358 217 Pfam PF00936 BMC domain 35 106 3.9E-11 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0799 8c84b5b24e04336f6c8ba285c46ae358 217 SMART SM00877 145 214 2.9E-6 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0799 8c84b5b24e04336f6c8ba285c46ae358 217 SMART SM00877 34 121 6.6E-6 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0799 8c84b5b24e04336f6c8ba285c46ae358 217 PIRSF PIRSF012290 1 217 4.5E-84 T 11-10-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0031469 Clos_0799 8c84b5b24e04336f6c8ba285c46ae358 217 Gene3D G3DSA:3.30.70.1810 7 105 2.8E-42 T 11-10-2018 Clos_0799 8c84b5b24e04336f6c8ba285c46ae358 217 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 5 217 2.2E-108 T 11-10-2018 IPR030983 Ethanolamine utilization protein EutL GO:0005198 Clos_0799 8c84b5b24e04336f6c8ba285c46ae358 217 Gene3D G3DSA:3.30.70.1810 106 217 1.4E-49 T 11-10-2018 Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 SMART SM00388 76 138 3.6E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 Gene3D G3DSA:1.10.287.130 63 136 5.8E-11 T 11-10-2018 Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 189 282 1.2E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 Gene3D G3DSA:3.30.565.10 137 284 5.9E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 SUPERFAMILY SSF55874 129 282 1.11E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 SUPERFAMILY SSF47384 60 137 1.8E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 Pfam PF00512 His Kinase A (phospho-acceptor) domain 81 137 9.5E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 PRINTS PR00344 Bacterial sensor protein C-terminal signature 218 232 1.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 PRINTS PR00344 Bacterial sensor protein C-terminal signature 236 246 1.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 PRINTS PR00344 Bacterial sensor protein C-terminal signature 248 266 1.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0728 9d75c0079815de5cbf62846310e60f0a 287 SMART SM00387 182 287 5.6E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_2331 321af7d0331948f2b393540535a9fe38 209 Gene3D G3DSA:2.20.28.10 168 205 9.6E-10 T 11-10-2018 Clos_2331 321af7d0331948f2b393540535a9fe38 209 SUPERFAMILY SSF47240 24 165 5.28E-35 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_2331 321af7d0331948f2b393540535a9fe38 209 Gene3D G3DSA:1.20.1260.10 24 167 3.3E-43 T 11-10-2018 IPR012347 Ferritin-like Clos_2331 321af7d0331948f2b393540535a9fe38 209 SUPERFAMILY SSF57802 172 204 7.46E-8 T 11-10-2018 Clos_2331 321af7d0331948f2b393540535a9fe38 209 Pfam PF02915 Rubrerythrin 32 159 1.1E-21 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Clos_0950 b92fc7c52486f8c18a55d51b4a529338 387 Gene3D G3DSA:3.40.50.300 4 252 1.0E-57 T 11-10-2018 Clos_0950 b92fc7c52486f8c18a55d51b4a529338 387 Pfam PF00005 ABC transporter 20 168 2.3E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0950 b92fc7c52486f8c18a55d51b4a529338 387 ProDom PD064925 ATP-BINDING ABC NUCLEOTIDE-BINDING MEMBRANE TRANSPORTER IRON TRANSPORTER COMPOUND ATPASE III 289 372 3.0E-10 T 11-10-2018 IPR020322 Uncharacterised domain MJ0874 Clos_0950 b92fc7c52486f8c18a55d51b4a529338 387 SUPERFAMILY SSF52540 4 232 3.29E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0950 b92fc7c52486f8c18a55d51b4a529338 387 SMART SM00382 28 217 3.3E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1561 850308805932842c535400ba8f1d7a85 378 Gene3D G3DSA:2.40.50.140 276 359 2.9E-29 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 Gene3D G3DSA:2.40.50.140 191 274 2.7E-29 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 PRINTS PR00681 Ribosomal protein S1 signature 22 40 3.3E-53 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 PRINTS PR00681 Ribosomal protein S1 signature 294 313 3.3E-53 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 PRINTS PR00681 Ribosomal protein S1 signature 40 54 3.3E-53 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 PRINTS PR00681 Ribosomal protein S1 signature 216 237 3.3E-53 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 PRINTS PR00681 Ribosomal protein S1 signature 88 107 3.3E-53 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 PRINTS PR00681 Ribosomal protein S1 signature 130 147 3.3E-53 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 PRINTS PR00681 Ribosomal protein S1 signature 159 179 3.3E-53 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 PRINTS PR00681 Ribosomal protein S1 signature 112 128 3.3E-53 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 PRINTS PR00681 Ribosomal protein S1 signature 333 351 3.3E-53 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 Gene3D G3DSA:2.40.50.140 103 182 1.3E-8 T 11-10-2018 Clos_1561 850308805932842c535400ba8f1d7a85 378 SMART SM00316 279 350 8.4E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_1561 850308805932842c535400ba8f1d7a85 378 SMART SM00316 20 91 1.2E-17 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_1561 850308805932842c535400ba8f1d7a85 378 SMART SM00316 194 264 5.8E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_1561 850308805932842c535400ba8f1d7a85 378 SMART SM00316 107 175 1.3E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 Clos_1561 850308805932842c535400ba8f1d7a85 378 SUPERFAMILY SSF50249 194 281 7.36E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1561 850308805932842c535400ba8f1d7a85 378 SUPERFAMILY SSF50249 3 116 4.86E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1561 850308805932842c535400ba8f1d7a85 378 SUPERFAMILY SSF50249 264 352 2.83E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1561 850308805932842c535400ba8f1d7a85 378 SUPERFAMILY SSF50249 95 178 9.93E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1561 850308805932842c535400ba8f1d7a85 378 Pfam PF00575 S1 RNA binding domain 193 264 5.2E-22 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_1561 850308805932842c535400ba8f1d7a85 378 Pfam PF00575 S1 RNA binding domain 278 349 1.0E-22 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_1561 850308805932842c535400ba8f1d7a85 378 Pfam PF00575 S1 RNA binding domain 109 175 1.6E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_1561 850308805932842c535400ba8f1d7a85 378 Pfam PF00575 S1 RNA binding domain 20 91 8.7E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 Clos_1561 850308805932842c535400ba8f1d7a85 378 Gene3D G3DSA:2.40.50.140 6 102 9.3E-23 T 11-10-2018 Clos_0358 79dffc320e2fdc29144d194415d0edb0 338 SUPERFAMILY SSF46600 191 229 1.7E-6 T 11-10-2018 IPR036876 UVR domain superfamily Clos_0358 79dffc320e2fdc29144d194415d0edb0 338 SUPERFAMILY SSF82771 18 100 2.62E-20 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Clos_0358 79dffc320e2fdc29144d194415d0edb0 338 SMART SM00465 18 99 3.0E-18 T 11-10-2018 IPR000305 GIY-YIG endonuclease Clos_0358 79dffc320e2fdc29144d194415d0edb0 338 Gene3D G3DSA:3.40.1440.10 4 103 2.9E-32 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Clos_0358 79dffc320e2fdc29144d194415d0edb0 338 Pfam PF01541 GIY-YIG catalytic domain 19 94 7.7E-11 T 11-10-2018 IPR000305 GIY-YIG endonuclease Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 322 37.614 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 Gene3D G3DSA:3.40.50.720 1 187 6.0E-66 T 11-10-2018 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 SUPERFAMILY SSF48179 180 331 5.27E-58 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 PIRSF PIRSF000114 1 332 2.5E-114 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 160 7.7E-54 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 3.4E-54 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 3.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 3.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 3.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 3.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 3.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 3.2E-44 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 Gene3D G3DSA:1.10.1040.10 189 336 5.5E-53 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Clos_1401 30996d866ef7c9fc9fae62f34d2da9d5 343 SUPERFAMILY SSF51735 5 178 4.3E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_2573 8908ee0e4572c4c6a0ec41e24fded0d4 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 4.2E-62 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Clos_2573 8908ee0e4572c4c6a0ec41e24fded0d4 149 Gene3D G3DSA:3.40.1400.10 1 148 1.5E-61 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Clos_2573 8908ee0e4572c4c6a0ec41e24fded0d4 149 SUPERFAMILY SSF89623 2 144 7.19E-61 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Clos_2573 8908ee0e4572c4c6a0ec41e24fded0d4 149 Pfam PF02502 Ribose/Galactose Isomerase 3 140 7.5E-59 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Clos_2573 8908ee0e4572c4c6a0ec41e24fded0d4 149 PIRSF PIRSF005384 1 147 6.6E-61 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Clos_2573 8908ee0e4572c4c6a0ec41e24fded0d4 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 144 5.0E-59 T 11-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 Clos_0042 b993b93cfb7cd2b4aa8708de72cfaa89 286 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 124 215 1.4E-10 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clos_0042 b993b93cfb7cd2b4aa8708de72cfaa89 286 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 10 281 3.1E-81 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Clos_0042 b993b93cfb7cd2b4aa8708de72cfaa89 286 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 9 285 35.205 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Clos_0042 b993b93cfb7cd2b4aa8708de72cfaa89 286 Gene3D G3DSA:3.40.50.720 110 257 2.9E-96 T 11-10-2018 Clos_0042 b993b93cfb7cd2b4aa8708de72cfaa89 286 Gene3D G3DSA:3.40.50.10860 13 271 2.9E-96 T 11-10-2018 Clos_0042 b993b93cfb7cd2b4aa8708de72cfaa89 286 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 96 5.2E-30 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Clos_0042 b993b93cfb7cd2b4aa8708de72cfaa89 286 SUPERFAMILY SSF53223 4 108 1.04E-34 T 11-10-2018 Clos_0042 b993b93cfb7cd2b4aa8708de72cfaa89 286 SUPERFAMILY SSF51735 109 283 6.95E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_2295 ecab5bb775cd3f2e648c42bd33a49dd5 228 Pfam PF17225 Domain of unknown function (DUF5300) 31 124 5.0E-26 T 11-10-2018 IPR033782 Domain of unknown function DUF5301 Clos_2295 ecab5bb775cd3f2e648c42bd33a49dd5 228 Gene3D G3DSA:3.30.1490.320 32 133 3.7E-24 T 11-10-2018 Clos_0307 1b1575f127026af317fe7800e6e714e2 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 189 231 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Clos_0307 1b1575f127026af317fe7800e6e714e2 245 Pfam PF12833 Helix-turn-helix domain 158 236 1.3E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0307 1b1575f127026af317fe7800e6e714e2 245 SMART SM00342 152 235 8.7E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_0307 1b1575f127026af317fe7800e6e714e2 245 Gene3D G3DSA:1.10.10.60 135 184 3.0E-16 T 11-10-2018 Clos_0307 1b1575f127026af317fe7800e6e714e2 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 204 219 8.6E-8 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_0307 1b1575f127026af317fe7800e6e714e2 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 219 235 8.6E-8 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Clos_0307 1b1575f127026af317fe7800e6e714e2 245 SUPERFAMILY SSF46689 189 237 3.54E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0307 1b1575f127026af317fe7800e6e714e2 245 SUPERFAMILY SSF46689 135 185 6.99E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0307 1b1575f127026af317fe7800e6e714e2 245 Gene3D G3DSA:1.10.10.60 185 241 2.9E-20 T 11-10-2018 Clos_0653 570bfeb3958d6eaf84cee60de134d02f 104 Gene3D G3DSA:3.40.30.10 1 104 2.6E-35 T 11-10-2018 Clos_0653 570bfeb3958d6eaf84cee60de134d02f 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 103 9.3E-40 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Clos_0653 570bfeb3958d6eaf84cee60de134d02f 104 PIRSF PIRSF000077 1 104 2.7E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Clos_0653 570bfeb3958d6eaf84cee60de134d02f 104 PRINTS PR00421 Thioredoxin family signature 68 79 9.3E-10 T 11-10-2018 Clos_0653 570bfeb3958d6eaf84cee60de134d02f 104 PRINTS PR00421 Thioredoxin family signature 28 37 9.3E-10 T 11-10-2018 Clos_0653 570bfeb3958d6eaf84cee60de134d02f 104 PRINTS PR00421 Thioredoxin family signature 20 28 9.3E-10 T 11-10-2018 Clos_0653 570bfeb3958d6eaf84cee60de134d02f 104 Pfam PF00085 Thioredoxin 2 103 3.8E-31 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Clos_0653 570bfeb3958d6eaf84cee60de134d02f 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Clos_0653 570bfeb3958d6eaf84cee60de134d02f 104 SUPERFAMILY SSF52833 2 104 1.67E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0410 ebc2eb627213636f1228e67737012733 284 SUPERFAMILY SSF55073 124 247 2.16E-25 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_0410 ebc2eb627213636f1228e67737012733 284 SUPERFAMILY SSF54631 5 111 2.44E-13 T 11-10-2018 Clos_0410 ebc2eb627213636f1228e67737012733 284 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 119 252 4.8E-25 T 11-10-2018 IPR000160 GGDEF domain Clos_0410 ebc2eb627213636f1228e67737012733 284 Gene3D G3DSA:3.10.580.10 3 120 2.4E-11 T 11-10-2018 Clos_0410 ebc2eb627213636f1228e67737012733 284 Pfam PF00571 CBS domain 63 111 7.5E-5 T 11-10-2018 IPR000644 CBS domain Clos_0410 ebc2eb627213636f1228e67737012733 284 Gene3D G3DSA:3.30.70.270 121 280 7.9E-29 T 11-10-2018 Clos_0410 ebc2eb627213636f1228e67737012733 284 SMART SM00267 105 277 5.0E-13 T 11-10-2018 IPR000160 GGDEF domain Clos_0410 ebc2eb627213636f1228e67737012733 284 Pfam PF00990 Diguanylate cyclase, GGDEF domain 121 250 1.8E-23 T 11-10-2018 IPR000160 GGDEF domain Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 SUPERFAMILY SSF140990 410 585 3.27E-48 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 Gene3D G3DSA:1.10.8.60 324 398 5.0E-22 T 11-10-2018 Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 106 583 1.3E-157 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 Pfam PF01434 Peptidase family M41 384 581 5.4E-46 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 6.2E-44 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 SUPERFAMILY SSF52540 146 391 1.38E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 SMART SM00382 186 325 3.1E-23 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 Gene3D G3DSA:1.20.58.760 399 587 2.1E-50 T 11-10-2018 Clos_1173 0ae9327e17286a9a1c39b4b1185ed980 587 Gene3D G3DSA:3.40.50.300 140 322 4.0E-66 T 11-10-2018 Clos_1624 3263260961601268cf35192da054a242 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.364 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Clos_1624 3263260961601268cf35192da054a242 185 SMART SM00841 129 184 4.0E-35 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Clos_1624 3263260961601268cf35192da054a242 185 SUPERFAMILY SSF50249 128 185 1.25E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1624 3263260961601268cf35192da054a242 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 2.0E-79 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Clos_1624 3263260961601268cf35192da054a242 185 Gene3D G3DSA:2.40.50.140 128 185 4.6E-29 T 11-10-2018 Clos_1624 3263260961601268cf35192da054a242 185 PIRSF PIRSF005901 1 185 9.7E-67 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP Clos_1624 3263260961601268cf35192da054a242 185 SMART SM01185 67 121 2.7E-24 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Clos_1624 3263260961601268cf35192da054a242 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 2.0E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Clos_1624 3263260961601268cf35192da054a242 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 2.1E-28 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Clos_1624 3263260961601268cf35192da054a242 185 SUPERFAMILY SSF50249 65 129 1.97E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1624 3263260961601268cf35192da054a242 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Clos_1624 3263260961601268cf35192da054a242 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 4.2E-27 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like Clos_1624 3263260961601268cf35192da054a242 185 Gene3D G3DSA:2.30.30.30 1 62 2.6E-27 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Clos_1624 3263260961601268cf35192da054a242 185 SUPERFAMILY SSF50104 1 62 1.71E-21 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Clos_1624 3263260961601268cf35192da054a242 185 Gene3D G3DSA:2.40.50.140 64 127 3.4E-26 T 11-10-2018 Clos_0758 c37b83597c2b50bdf826caa681d91aee 175 SUPERFAMILY SSF53597 4 173 2.62E-35 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Clos_0758 c37b83597c2b50bdf826caa681d91aee 175 Pfam PF01872 RibD C-terminal domain 4 164 2.0E-20 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Clos_0758 c37b83597c2b50bdf826caa681d91aee 175 Gene3D G3DSA:3.40.430.10 2 174 1.1E-46 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 Pfam PF00672 HAMP domain 187 234 1.8E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 SUPERFAMILY SSF55785 238 353 2.27E-12 T 11-10-2018 IPR035965 PAS domain superfamily Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 SUPERFAMILY SSF55874 417 584 1.44E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 584 2.1E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 Pfam PF16736 Single Cache-like 32 141 4.3E-14 T 11-10-2018 IPR031967 PhoR, single Cache-like domain Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 242 360 1.5E-9 T 11-10-2018 IPR000014 PAS domain Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 SMART SM00387 474 586 2.4E-41 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 Gene3D G3DSA:1.20.1480.50 152 239 1.9E-11 T 11-10-2018 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 2.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 2.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 2.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 2.9E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 SUPERFAMILY SSF158472 188 236 8.24E-11 T 11-10-2018 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 Gene3D G3DSA:3.30.450.20 240 356 4.5E-19 T 11-10-2018 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 SMART SM00091 245 311 1.3E-5 T 11-10-2018 IPR000014 PAS domain Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 SMART SM00388 361 428 4.8E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 Pfam PF00512 His Kinase A (phospho-acceptor) domain 361 427 3.8E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 Pfam PF00989 PAS fold 246 352 2.2E-10 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 Gene3D G3DSA:1.10.287.130 357 432 9.0E-27 T 11-10-2018 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 SMART SM00304 186 238 4.5E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 Gene3D G3DSA:3.30.565.10 441 587 1.2E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1393 5fcc5f98f86e9303fbf071d763b8f4c9 587 SUPERFAMILY SSF47384 345 427 3.92E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_1705 31e4f6ae9dddd0c4668200f4be85fb46 143 SUPERFAMILY SSF47240 4 133 1.09E-11 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_1705 31e4f6ae9dddd0c4668200f4be85fb46 143 Pfam PF09537 Domain of unknown function (DUF2383) 6 114 7.9E-28 T 11-10-2018 IPR019052 Domain of unknown function DUF2383 Clos_1705 31e4f6ae9dddd0c4668200f4be85fb46 143 Gene3D G3DSA:1.20.1260.10 5 143 1.5E-37 T 11-10-2018 IPR012347 Ferritin-like Clos_0466 86b10efbe5eae7c799e1441c00df75df 292 Pfam PF06207 Protein of unknown function (DUF1002) 34 252 1.0E-77 T 11-10-2018 IPR009343 Protein of unknown function DUF1002 Clos_0575 fef22e236a8508fcb347d33b9601d194 443 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 104 417 8.4E-111 T 11-10-2018 IPR010119 Gluconeogenesis factor Clos_0575 fef22e236a8508fcb347d33b9601d194 443 SUPERFAMILY SSF142338 100 415 6.93E-97 T 11-10-2018 Clos_0575 fef22e236a8508fcb347d33b9601d194 443 Hamap MF_00973 Gluconeogenesis factor. 100 420 34.045 T 11-10-2018 IPR010119 Gluconeogenesis factor Clos_0575 fef22e236a8508fcb347d33b9601d194 443 Pfam PF01933 Uncharacterised protein family UPF0052 104 395 3.8E-102 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Clos_0575 fef22e236a8508fcb347d33b9601d194 443 Gene3D G3DSA:3.40.50.12300 99 429 9.3E-121 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily Clos_0693 cb04e39ad1574db2ec36b24d07dd5ef6 59 Pfam PF08279 HTH domain 7 49 9.3E-5 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Clos_0693 cb04e39ad1574db2ec36b24d07dd5ef6 59 SUPERFAMILY SSF46785 2 57 1.12E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0693 cb04e39ad1574db2ec36b24d07dd5ef6 59 Gene3D G3DSA:1.10.10.10 1 58 1.1E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1722 8a5d6febe7b0e774a1bca6e0402e1e3f 372 Pfam PF01702 Queuine tRNA-ribosyltransferase 132 364 4.0E-93 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Clos_1722 8a5d6febe7b0e774a1bca6e0402e1e3f 372 SUPERFAMILY SSF51713 3 368 2.35E-166 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Clos_1722 8a5d6febe7b0e774a1bca6e0402e1e3f 372 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 5.1E-170 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Clos_1722 8a5d6febe7b0e774a1bca6e0402e1e3f 372 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 370 1.6E-178 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Clos_1722 8a5d6febe7b0e774a1bca6e0402e1e3f 372 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 367 58.201 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Clos_1722 8a5d6febe7b0e774a1bca6e0402e1e3f 372 Gene3D G3DSA:3.20.20.105 1 371 1.8E-177 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Clos_1762 57d051ed138ec37f1ac476f187c7c3c6 935 Gene3D G3DSA:3.40.710.10 852 923 9.7E-12 T 11-10-2018 Clos_1762 57d051ed138ec37f1ac476f187c7c3c6 935 SUPERFAMILY SSF56601 871 917 1.69E-6 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_1762 57d051ed138ec37f1ac476f187c7c3c6 935 Gene3D G3DSA:3.90.1310.30 46 191 4.4E-8 T 11-10-2018 Clos_1762 57d051ed138ec37f1ac476f187c7c3c6 935 Gene3D G3DSA:3.90.1310.30 194 371 3.7E-28 T 11-10-2018 Clos_1762 57d051ed138ec37f1ac476f187c7c3c6 935 SUPERFAMILY SSF56601 326 799 1.86E-64 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_1762 57d051ed138ec37f1ac476f187c7c3c6 935 Pfam PF00905 Penicillin binding protein transpeptidase domain 422 801 7.4E-48 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Clos_1762 57d051ed138ec37f1ac476f187c7c3c6 935 Pfam PF00905 Penicillin binding protein transpeptidase domain 868 912 9.3E-7 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Clos_1762 57d051ed138ec37f1ac476f187c7c3c6 935 Pfam PF03717 Penicillin-binding Protein dimerisation domain 53 360 1.2E-54 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Clos_1762 57d051ed138ec37f1ac476f187c7c3c6 935 SUPERFAMILY SSF56519 46 374 5.1E-42 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Clos_2554 b2cc0b05c9f3549587a237bbaf505019 335 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 57 326 1.8E-76 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Clos_2554 b2cc0b05c9f3549587a237bbaf505019 335 Pfam PF08486 Stage II sporulation protein 52 161 1.1E-25 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Clos_2554 b2cc0b05c9f3549587a237bbaf505019 335 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 29 326 1.7E-114 T 11-10-2018 IPR014225 Sporulation stage II, protein D firmicutes Clos_1345 fcbc7a9cd0bfdf7e884b8a791357f759 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 327 8.2E-28 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_1345 fcbc7a9cd0bfdf7e884b8a791357f759 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 307 2.3E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_1345 fcbc7a9cd0bfdf7e884b8a791357f759 328 Gene3D G3DSA:3.40.50.300 9 328 8.3E-102 T 11-10-2018 Clos_1345 fcbc7a9cd0bfdf7e884b8a791357f759 328 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1345 fcbc7a9cd0bfdf7e884b8a791357f759 328 Pfam PF00005 ABC transporter 39 190 2.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1345 fcbc7a9cd0bfdf7e884b8a791357f759 328 SMART SM00382 47 240 3.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1345 fcbc7a9cd0bfdf7e884b8a791357f759 328 SUPERFAMILY SSF52540 12 262 9.02E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0928 1dc893a6f1bcaa612a1fe43fbea293b2 166 PIRSF PIRSF000216 3 166 1.3E-55 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0928 1dc893a6f1bcaa612a1fe43fbea293b2 166 Gene3D G3DSA:3.40.30.10 82 164 4.7E-32 T 11-10-2018 Clos_0928 1dc893a6f1bcaa612a1fe43fbea293b2 166 Gene3D G3DSA:1.10.10.1590 12 81 1.4E-14 T 11-10-2018 Clos_0928 1dc893a6f1bcaa612a1fe43fbea293b2 166 SUPERFAMILY SSF52833 20 164 6.49E-52 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0928 1dc893a6f1bcaa612a1fe43fbea293b2 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 164 6.5E-52 T 11-10-2018 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 239 1.3E-14 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.4E-39 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 Gene3D G3DSA:3.10.50.40 151 248 2.9E-89 T 11-10-2018 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 Gene3D G3DSA:3.30.70.1050 2 114 2.3E-32 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 422 1.1E-40 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 SUPERFAMILY SSF102735 1 130 3.27E-35 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 PIRSF PIRSF003095 1 427 1.0E-125 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 SUPERFAMILY SSF109998 250 426 2.35E-42 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 Hamap MF_00303 Trigger factor [tig]. 1 428 22.722 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 Gene3D G3DSA:1.10.3120.10 115 426 2.9E-89 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 TIGRFAM TIGR00115 tig: trigger factor 12 421 1.4E-133 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Clos_2175 61ca9faffe60d7e791aff8bc7a41a890 428 SUPERFAMILY SSF54534 89 244 1.22E-35 T 11-10-2018 Clos_1718 4b92437edf6e234bda0dce5dc2f18ca9 455 Pfam PF13186 Iron-sulfur cluster-binding domain 343 403 1.5E-6 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain Clos_1718 4b92437edf6e234bda0dce5dc2f18ca9 455 Pfam PF13353 4Fe-4S single cluster domain 96 219 1.1E-13 T 11-10-2018 Clos_1718 4b92437edf6e234bda0dce5dc2f18ca9 455 Pfam PF04055 Radical SAM superfamily 100 247 2.8E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1718 4b92437edf6e234bda0dce5dc2f18ca9 455 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 99 110 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Clos_1718 4b92437edf6e234bda0dce5dc2f18ca9 455 Gene3D G3DSA:3.20.20.70 90 450 9.9E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1718 4b92437edf6e234bda0dce5dc2f18ca9 455 TIGRFAM TIGR03974 rSAM_six_Cys: SCIFF radical SAM maturase 3 446 5.2E-215 T 11-10-2018 IPR024025 SCIFF radical SAM maturase Clos_1718 4b92437edf6e234bda0dce5dc2f18ca9 455 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 343 431 9.6E-21 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain Clos_1718 4b92437edf6e234bda0dce5dc2f18ca9 455 SUPERFAMILY SSF102114 93 412 2.88E-57 T 11-10-2018 Clos_0125 89ae6101edaa08cf9369cd90666beeeb 347 Gene3D G3DSA:3.40.50.300 1 244 6.0E-78 T 11-10-2018 Clos_0125 89ae6101edaa08cf9369cd90666beeeb 347 SUPERFAMILY SSF55021 252 344 8.81E-19 T 11-10-2018 Clos_0125 89ae6101edaa08cf9369cd90666beeeb 347 Gene3D G3DSA:3.30.70.260 249 346 5.0E-18 T 11-10-2018 Clos_0125 89ae6101edaa08cf9369cd90666beeeb 347 SUPERFAMILY SSF52540 1 240 3.8E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0125 89ae6101edaa08cf9369cd90666beeeb 347 SMART SM00382 30 218 1.2E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0125 89ae6101edaa08cf9369cd90666beeeb 347 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0125 89ae6101edaa08cf9369cd90666beeeb 347 Pfam PF00005 ABC transporter 22 169 2.0E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0125 89ae6101edaa08cf9369cd90666beeeb 347 SMART SM00930 266 341 3.9E-20 T 11-10-2018 IPR018449 NIL domain Clos_0125 89ae6101edaa08cf9369cd90666beeeb 347 Pfam PF09383 NIL domain 269 340 3.3E-16 T 11-10-2018 IPR018449 NIL domain Clos_1792 45312ea315c336ee69a5759ff14022c7 135 Pfam PF13782 Stage V sporulation protein AB 25 132 2.7E-32 T 11-10-2018 IPR020144 Stage V sporulation protein AB Clos_1792 45312ea315c336ee69a5759ff14022c7 135 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 6 132 2.0E-41 T 11-10-2018 IPR020144 Stage V sporulation protein AB Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 PIRSF PIRSF016578 6 111 1.1E-8 T 11-10-2018 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 PIRSF PIRSF016578 127 379 2.0E-14 T 11-10-2018 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 Gene3D G3DSA:1.20.140.10 235 379 1.3E-60 T 11-10-2018 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.1E-29 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 Gene3D G3DSA:1.10.540.10 1 120 1.9E-43 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 SUPERFAMILY SSF56645 2 242 2.88E-90 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 1.7E-37 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 Gene3D G3DSA:2.40.110.10 121 234 1.8E-45 T 11-10-2018 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 SUPERFAMILY SSF47203 227 378 4.99E-64 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Clos_0636 4c13add8fa809e1aa0523c10acd9d352 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 2.6E-57 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 SUPERFAMILY SSF49493 137 289 3.4E-18 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 25 377 1.5E-140 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 SUPERFAMILY SSF46565 21 127 1.22E-38 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 SMART SM00271 24 82 1.2E-34 T 11-10-2018 IPR001623 DnaJ domain Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 22 396 41.384 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 Gene3D G3DSA:2.60.260.20 140 276 4.7E-33 T 11-10-2018 Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 PRINTS PR00625 DnaJ domain signature 45 60 3.4E-34 T 11-10-2018 IPR001623 DnaJ domain Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 PRINTS PR00625 DnaJ domain signature 62 82 3.4E-34 T 11-10-2018 IPR001623 DnaJ domain Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 PRINTS PR00625 DnaJ domain signature 27 45 3.4E-34 T 11-10-2018 IPR001623 DnaJ domain Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 PRINTS PR00625 DnaJ domain signature 82 101 3.4E-34 T 11-10-2018 IPR001623 DnaJ domain Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 Pfam PF01556 DnaJ C terminal domain 144 360 2.3E-42 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 Gene3D G3DSA:1.10.287.110 21 135 7.5E-40 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 Gene3D G3DSA:2.10.230.10 170 234 4.7E-33 T 11-10-2018 Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 Pfam PF00684 DnaJ central domain 170 234 4.1E-13 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 SUPERFAMILY SSF49493 286 371 5.89E-23 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 Gene3D G3DSA:2.60.260.20 281 392 3.2E-30 T 11-10-2018 Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 Pfam PF00226 DnaJ domain 25 87 2.1E-29 T 11-10-2018 IPR001623 DnaJ domain Clos_1234 8c1c34d746365616fc3f59534664a0bd 399 SUPERFAMILY SSF57938 157 237 3.14E-18 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Clos_0853 2ffd0278a1e2b6b0b204538e07e4a053 189 Gene3D G3DSA:2.60.120.10 66 189 1.1E-38 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_0853 2ffd0278a1e2b6b0b204538e07e4a053 189 SUPERFAMILY SSF51182 35 171 2.61E-23 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Clos_0853 2ffd0278a1e2b6b0b204538e07e4a053 189 Pfam PF07883 Cupin domain 91 166 2.8E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel Clos_2053 c161af29bc816f0b1539dca02caeec10 890 SUPERFAMILY SSF81665 4 885 2.09E-97 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 Gene3D G3DSA:2.70.150.10 6 221 7.3E-201 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 646 1.5E-31 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 556 1.5E-31 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 1.5E-31 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 341 355 1.5E-31 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 535 1.5E-31 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 650 662 1.5E-31 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 55 3.0E-11 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 Pfam PF00702 haloacid dehalogenase-like hydrolase 338 641 1.3E-21 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 SUPERFAMILY SSF56784 340 731 8.66E-50 T 11-10-2018 IPR036412 HAD-like superfamily Clos_2053 c161af29bc816f0b1539dca02caeec10 890 SUPERFAMILY SSF81653 106 217 1.31E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 175 6.8E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 598 707 2.8E-28 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 Gene3D G3DSA:1.20.1110.10 39 883 7.3E-201 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 Pfam PF00122 E1-E2 ATPase 103 320 4.2E-40 T 11-10-2018 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 6 877 5.0E-187 T 11-10-2018 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 SUPERFAMILY SSF81660 347 536 2.18E-25 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 Gene3D G3DSA:3.40.50.1000 338 671 7.3E-201 T 11-10-2018 IPR023214 HAD superfamily Clos_2053 c161af29bc816f0b1539dca02caeec10 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 627 643 4.0E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 658 683 4.0E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 487 505 4.0E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 Pfam PF00689 Cation transporting ATPase, C-terminus 712 884 1.0E-37 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 343 349 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 Gene3D G3DSA:3.40.1110.10 351 531 7.3E-201 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Clos_2053 c161af29bc816f0b1539dca02caeec10 890 SMART SM00831 6 61 4.8E-4 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Clos_0222 797b2f0f36693eac7c2097ca6abc97fb 336 SMART SM00382 106 291 3.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0222 797b2f0f36693eac7c2097ca6abc97fb 336 Gene3D G3DSA:3.40.50.300 93 325 1.5E-26 T 11-10-2018 Clos_0222 797b2f0f36693eac7c2097ca6abc97fb 336 SUPERFAMILY SSF52540 82 292 1.7E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0222 797b2f0f36693eac7c2097ca6abc97fb 336 ProSitePatterns PS00211 ABC transporters family signature. 220 234 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0222 797b2f0f36693eac7c2097ca6abc97fb 336 Pfam PF00005 ABC transporter 99 247 3.8E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2134 327b499085f8542809588a49d8d54988 270 SUPERFAMILY SSF81345 3 258 3.66E-38 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2134 327b499085f8542809588a49d8d54988 270 Pfam PF00950 ABC 3 transport family 7 261 3.6E-68 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Clos_2134 327b499085f8542809588a49d8d54988 270 Gene3D G3DSA:1.10.3470.10 40 267 1.0E-6 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2866 2d4af3260b20d76bfb44e08fcc99dad1 380 Pfam PF00266 Aminotransferase class-V 2 368 5.3E-101 T 11-10-2018 IPR000192 Aminotransferase class V domain Clos_2866 2d4af3260b20d76bfb44e08fcc99dad1 380 Gene3D G3DSA:3.90.1150.10 2 370 9.4E-126 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_2866 2d4af3260b20d76bfb44e08fcc99dad1 380 PIRSF PIRSF005572 1 380 2.4E-70 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Clos_2866 2d4af3260b20d76bfb44e08fcc99dad1 380 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 2 376 2.1E-160 T 11-10-2018 IPR010969 Cysteine desulfurase-related, unknown function Clos_2866 2d4af3260b20d76bfb44e08fcc99dad1 380 Gene3D G3DSA:3.40.640.10 16 266 9.4E-126 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_2866 2d4af3260b20d76bfb44e08fcc99dad1 380 SUPERFAMILY SSF53383 1 378 1.47E-107 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1392 679900828462a88888b188a8a40b060a 237 Pfam PF00072 Response regulator receiver domain 9 121 1.2E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1392 679900828462a88888b188a8a40b060a 237 SUPERFAMILY SSF52172 4 135 9.82E-46 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1392 679900828462a88888b188a8a40b060a 237 Gene3D G3DSA:3.40.50.2300 1 138 1.4E-43 T 11-10-2018 Clos_1392 679900828462a88888b188a8a40b060a 237 Gene3D G3DSA:1.10.10.10 139 237 1.1E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1392 679900828462a88888b188a8a40b060a 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 236 6.1E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_1392 679900828462a88888b188a8a40b060a 237 SMART SM00448 7 120 1.5E-46 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1392 679900828462a88888b188a8a40b060a 237 SMART SM00862 161 236 5.0E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_1392 679900828462a88888b188a8a40b060a 237 SUPERFAMILY SSF46894 137 236 2.17E-32 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_2634 c9e1b2e0c14602de44d2796e5b8aec65 96 Pfam PF07873 YabP family 12 77 1.8E-19 T 11-10-2018 IPR022476 Sporulation protein YabP/YqfC Clos_2634 c9e1b2e0c14602de44d2796e5b8aec65 96 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 12 96 1.4E-28 T 11-10-2018 IPR012504 Sporulation protein YabP Clos_2634 c9e1b2e0c14602de44d2796e5b8aec65 96 PIRSF PIRSF011576 2 96 1.1E-23 T 11-10-2018 IPR012504 Sporulation protein YabP Clos_2634 c9e1b2e0c14602de44d2796e5b8aec65 96 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 12 96 1.0E-19 T 11-10-2018 IPR012504 Sporulation protein YabP Clos_2634 c9e1b2e0c14602de44d2796e5b8aec65 96 Gene3D G3DSA:2.60.40.2000 20 77 2.2E-21 T 11-10-2018 IPR038705 YabP superfamily Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 67 239 4.1E-35 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 SUPERFAMILY SSF88659 148 241 3.36E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 Gene3D G3DSA:1.10.10.10 166 243 1.2E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 Pfam PF04542 Sigma-70 region 2 67 136 4.2E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 91 104 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 PRINTS PR00046 Major sigma-70 factor signature 91 104 2.2E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 PRINTS PR00046 Major sigma-70 factor signature 225 236 2.2E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 PRINTS PR00046 Major sigma-70 factor signature 210 225 2.2E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.2E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 PIRSF PIRSF000770 13 244 4.8E-68 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 SUPERFAMILY SSF88946 30 136 2.98E-33 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 Pfam PF04545 Sigma-70, region 4 185 238 6.2E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 Gene3D G3DSA:1.20.120.1810 19 136 9.8E-24 T 11-10-2018 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1387 12242e7e4fd285ac412c2b71d678d82b 244 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 14 244 5.0E-125 T 11-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_2688 8397c640e0abb98d5ca36076e0c6a3ef 789 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 2 785 6.8E-219 T 11-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Clos_2688 8397c640e0abb98d5ca36076e0c6a3ef 789 SUPERFAMILY SSF51998 2 786 1.19E-236 T 11-10-2018 Clos_2688 8397c640e0abb98d5ca36076e0c6a3ef 789 Gene3D G3DSA:3.20.70.40 2 789 1.1E-300 T 11-10-2018 Clos_2688 8397c640e0abb98d5ca36076e0c6a3ef 789 Pfam PF01228 Glycine radical 667 770 3.2E-29 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 Clos_2688 8397c640e0abb98d5ca36076e0c6a3ef 789 Pfam PF02901 Pyruvate formate lyase-like 3 650 1.3E-225 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Clos_2711 73663e13576947ed42909e60793e939b 1632 Pfam PF01467 Cytidylyltransferase-like 922 1086 5.1E-7 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Clos_2711 73663e13576947ed42909e60793e939b 1632 SUPERFAMILY SSF52374 919 1116 2.95E-23 T 11-10-2018 Clos_2711 73663e13576947ed42909e60793e939b 1632 SUPERFAMILY SSF109604 160 281 6.28E-11 T 11-10-2018 Clos_2711 73663e13576947ed42909e60793e939b 1632 Gene3D G3DSA:3.40.50.620 917 1120 1.3E-24 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_2711 73663e13576947ed42909e60793e939b 1632 SUPERFAMILY SSF48371 368 1136 2.8E-14 T 11-10-2018 IPR016024 Armadillo-type fold Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 SUPERFAMILY SSF69189 271 368 4.12E-20 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 3.2E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 61 72 3.2E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 3.2E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 27 259 2.3E-74 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 SUPERFAMILY SSF56601 4 279 1.07E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 Gene3D G3DSA:2.60.410.10 279 369 7.5E-21 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 SMART SM00936 279 369 1.3E-24 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 279 369 1.2E-19 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Clos_1588 9423afa6c7a61edd2af1ef0b16796c7f 386 Gene3D G3DSA:3.40.710.10 16 278 1.6E-90 T 11-10-2018 Clos_1574 8be58427a53a0798d207dc6e63dbb0d2 465 Gene3D G3DSA:3.20.20.70 1 457 2.4E-168 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1574 8be58427a53a0798d207dc6e63dbb0d2 465 Pfam PF02436 Conserved carboxylase domain 296 446 7.7E-53 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Clos_1574 8be58427a53a0798d207dc6e63dbb0d2 465 SUPERFAMILY SSF89000 299 445 1.02E-51 T 11-10-2018 Clos_1574 8be58427a53a0798d207dc6e63dbb0d2 465 SUPERFAMILY SSF51569 3 278 1.23E-85 T 11-10-2018 Clos_1574 8be58427a53a0798d207dc6e63dbb0d2 465 Pfam PF00682 HMGL-like 4 269 1.1E-47 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Clos_2268 38e2a7bbfed78ba263c0ea5a63d11d85 287 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 225 279 3.2E-22 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 Clos_2268 38e2a7bbfed78ba263c0ea5a63d11d85 287 Gene3D G3DSA:3.30.70.120 196 272 1.3E-27 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clos_2268 38e2a7bbfed78ba263c0ea5a63d11d85 287 PIRSF PIRSF006483 1 287 3.0E-87 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT Clos_2268 38e2a7bbfed78ba263c0ea5a63d11d85 287 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 219 5.1E-65 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT Clos_0268 5c0f91ff3e10cabaf8b75b010ca6298c 273 Gene3D G3DSA:1.10.3720.10 52 272 3.2E-38 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0268 5c0f91ff3e10cabaf8b75b010ca6298c 273 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 10 271 4.7E-87 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Clos_0268 5c0f91ff3e10cabaf8b75b010ca6298c 273 SUPERFAMILY SSF161098 12 266 7.29E-43 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0268 5c0f91ff3e10cabaf8b75b010ca6298c 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 267 1.3E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2796 6756a4df7d17c6ef084cb49f458fbf71 200 Gene3D G3DSA:3.40.630.30 4 158 8.8E-32 T 11-10-2018 Clos_2796 6756a4df7d17c6ef084cb49f458fbf71 200 Pfam PF13302 Acetyltransferase (GNAT) domain 9 144 2.1E-18 T 11-10-2018 IPR000182 GNAT domain Clos_2796 6756a4df7d17c6ef084cb49f458fbf71 200 SUPERFAMILY SSF55729 2 152 3.96E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1238 8c4b4dc8aca72d211d7724476970f408 115 SUPERFAMILY SSF54197 1 114 6.1E-39 T 11-10-2018 IPR036265 HIT-like superfamily Clos_1238 8c4b4dc8aca72d211d7724476970f408 115 Gene3D G3DSA:3.30.428.10 1 115 1.1E-40 T 11-10-2018 IPR036265 HIT-like superfamily Clos_1238 8c4b4dc8aca72d211d7724476970f408 115 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 11-10-2018 IPR019808 Histidine triad, conserved site Clos_1238 8c4b4dc8aca72d211d7724476970f408 115 Pfam PF01230 HIT domain 12 109 9.3E-27 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Clos_1238 8c4b4dc8aca72d211d7724476970f408 115 PRINTS PR00332 Histidine triad family signature 26 44 1.0E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Clos_1238 8c4b4dc8aca72d211d7724476970f408 115 PRINTS PR00332 Histidine triad family signature 95 105 1.0E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Clos_1238 8c4b4dc8aca72d211d7724476970f408 115 PRINTS PR00332 Histidine triad family signature 5 21 1.0E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Clos_0381 1e044ae7083eb0d504d12f5177624f0c 190 Gene3D G3DSA:3.90.550.10 1 189 6.0E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0381 1e044ae7083eb0d504d12f5177624f0c 190 SUPERFAMILY SSF53448 1 189 1.01E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0381 1e044ae7083eb0d504d12f5177624f0c 190 Pfam PF12804 MobA-like NTP transferase domain 3 162 3.1E-35 T 11-10-2018 IPR025877 MobA-like NTP transferase Clos_1938 96d0d6c861d1294b66e0a9419514006a 393 SUPERFAMILY SSF103365 6 391 1.31E-101 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Clos_1938 96d0d6c861d1294b66e0a9419514006a 393 Pfam PF01139 tRNA-splicing ligase RtcB 125 390 1.1E-52 T 11-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Clos_1938 96d0d6c861d1294b66e0a9419514006a 393 Gene3D G3DSA:3.90.1860.10 3 391 7.0E-75 T 11-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Clos_1938 96d0d6c861d1294b66e0a9419514006a 393 Pfam PF01139 tRNA-splicing ligase RtcB 26 111 1.4E-13 T 11-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Clos_2131 d83420fe1bb2a614c0c5ad00a4f11c9f 61 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 3 60 1.4E-29 T 11-10-2018 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide Clos_2131 d83420fe1bb2a614c0c5ad00a4f11c9f 61 Pfam PF08984 Domain of unknown function (DUF1858) 3 56 5.3E-24 T 11-10-2018 IPR015077 Domain of unknown function DUF1858 Clos_2131 d83420fe1bb2a614c0c5ad00a4f11c9f 61 Gene3D G3DSA:1.10.3910.10 1 61 2.4E-28 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Clos_2131 d83420fe1bb2a614c0c5ad00a4f11c9f 61 SUPERFAMILY SSF140683 1 61 8.5E-20 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Clos_2361 8166024d0318a058dbbaf8d92a69dee4 217 Pfam PF01144 Coenzyme A transferase 6 213 3.1E-65 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Clos_2361 8166024d0318a058dbbaf8d92a69dee4 217 Gene3D G3DSA:3.40.1080.10 2 216 5.6E-82 T 11-10-2018 Clos_2361 8166024d0318a058dbbaf8d92a69dee4 217 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 16 31 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 Clos_2361 8166024d0318a058dbbaf8d92a69dee4 217 SMART SM00882 4 215 1.9E-69 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Clos_2361 8166024d0318a058dbbaf8d92a69dee4 217 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 213 2.1E-65 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 Clos_2361 8166024d0318a058dbbaf8d92a69dee4 217 SUPERFAMILY SSF100950 3 213 7.54E-78 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_2689 2eba7ea90a659f4d0b6432d81d9cef08 225 SUPERFAMILY SSF48008 85 219 5.49E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Clos_2689 2eba7ea90a659f4d0b6432d81d9cef08 225 SMART SM00345 22 80 2.7E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_2689 2eba7ea90a659f4d0b6432d81d9cef08 225 Pfam PF07729 FCD domain 90 210 9.5E-24 T 11-10-2018 IPR011711 GntR, C-terminal Clos_2689 2eba7ea90a659f4d0b6432d81d9cef08 225 SUPERFAMILY SSF46785 13 84 5.46E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2689 2eba7ea90a659f4d0b6432d81d9cef08 225 Gene3D G3DSA:1.20.120.530 84 224 3.0E-30 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Clos_2689 2eba7ea90a659f4d0b6432d81d9cef08 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 2.0E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_2689 2eba7ea90a659f4d0b6432d81d9cef08 225 Gene3D G3DSA:1.10.10.10 8 81 3.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2689 2eba7ea90a659f4d0b6432d81d9cef08 225 SMART SM00895 90 211 9.7E-15 T 11-10-2018 IPR011711 GntR, C-terminal Clos_2704 95a0f6ffbcff5335f18b0ad9e8e70ffd 255 Gene3D G3DSA:3.40.50.300 1 253 3.3E-62 T 11-10-2018 Clos_2704 95a0f6ffbcff5335f18b0ad9e8e70ffd 255 SMART SM00382 31 226 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2704 95a0f6ffbcff5335f18b0ad9e8e70ffd 255 SUPERFAMILY SSF52540 2 241 4.05E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2704 95a0f6ffbcff5335f18b0ad9e8e70ffd 255 Pfam PF00005 ABC transporter 23 177 2.0E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2511 df5ad5eb1222966bf09c1e844a003273 148 Gene3D G3DSA:3.40.630.30 1 145 2.9E-24 T 11-10-2018 Clos_2511 df5ad5eb1222966bf09c1e844a003273 148 SUPERFAMILY SSF55729 8 136 4.51E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2511 df5ad5eb1222966bf09c1e844a003273 148 Pfam PF13302 Acetyltransferase (GNAT) domain 8 131 3.3E-12 T 11-10-2018 IPR000182 GNAT domain Clos_1811 fe6cc70a14a7aed0d537a368230cd1ac 165 SMART SM00852 5 149 3.8E-31 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1811 fe6cc70a14a7aed0d537a368230cd1ac 165 SUPERFAMILY SSF53218 2 154 7.46E-48 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1811 fe6cc70a14a7aed0d537a368230cd1ac 165 Gene3D G3DSA:3.40.980.10 1 165 3.1E-59 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Clos_1811 fe6cc70a14a7aed0d537a368230cd1ac 165 Pfam PF00994 Probable molybdopterin binding domain 5 148 4.0E-38 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_1811 fe6cc70a14a7aed0d537a368230cd1ac 165 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 143 2.5E-37 T 11-10-2018 IPR001453 MoaB/Mog domain Clos_2168 434e2b6f674f2bc6ac937ad8fbb3c6e3 52 Gene3D G3DSA:2.20.28.10 1 50 7.8E-28 T 11-10-2018 Clos_2168 434e2b6f674f2bc6ac937ad8fbb3c6e3 52 ProSitePatterns PS00202 Rubredoxin signature. 32 42 - T 11-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Clos_2168 434e2b6f674f2bc6ac937ad8fbb3c6e3 52 SUPERFAMILY SSF57802 2 51 3.53E-23 T 11-10-2018 Clos_2168 434e2b6f674f2bc6ac937ad8fbb3c6e3 52 PRINTS PR00163 Rubredoxin signature 2 18 4.3E-12 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 Clos_2168 434e2b6f674f2bc6ac937ad8fbb3c6e3 52 PRINTS PR00163 Rubredoxin signature 32 48 4.3E-12 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 Clos_2168 434e2b6f674f2bc6ac937ad8fbb3c6e3 52 PIRSF PIRSF000071 1 52 2.5E-27 T 11-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 Clos_2168 434e2b6f674f2bc6ac937ad8fbb3c6e3 52 Pfam PF00301 Rubredoxin 2 48 5.9E-25 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 SUPERFAMILY SSF51905 33 220 1.44E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 SUPERFAMILY SSF51905 176 323 6.59E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 36 55 5.5E-21 T 11-10-2018 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 5.5E-21 T 11-10-2018 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 5.5E-21 T 11-10-2018 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 5.5E-21 T 11-10-2018 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 5.5E-21 T 11-10-2018 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 2.4E-14 T 11-10-2018 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 57 2.4E-14 T 11-10-2018 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.4E-14 T 11-10-2018 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 2.4E-14 T 11-10-2018 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 35 308 1.9E-56 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 Gene3D G3DSA:3.30.390.30 345 419 1.8E-9 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 Gene3D G3DSA:3.50.50.60 37 333 5.1E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2493 f735a506fabfcddf25334bb09ea0b6d1 427 Gene3D G3DSA:3.50.50.60 144 268 5.1E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0218 952017ff639d177f5804db7b1c44182b 377 Pfam PF01497 Periplasmic binding protein 70 309 2.2E-18 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_0218 952017ff639d177f5804db7b1c44182b 377 SUPERFAMILY SSF53807 54 375 1.88E-61 T 11-10-2018 Clos_0218 952017ff639d177f5804db7b1c44182b 377 Gene3D G3DSA:3.40.50.1980 38 374 6.0E-74 T 11-10-2018 Clos_2109 860a7bf47464ee191324c76fcdf01520 541 Pfam PF02690 Na+/Pi-cotransporter 142 252 2.0E-20 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Clos_2109 860a7bf47464ee191324c76fcdf01520 541 Pfam PF02690 Na+/Pi-cotransporter 13 148 2.2E-50 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Clos_2109 860a7bf47464ee191324c76fcdf01520 541 Gene3D G3DSA:1.20.58.220 439 541 1.3E-20 T 11-10-2018 IPR038078 PhoU-like domain superfamily Clos_2109 860a7bf47464ee191324c76fcdf01520 541 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 7 312 1.6E-71 T 11-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 Clos_2109 860a7bf47464ee191324c76fcdf01520 541 SUPERFAMILY SSF109755 324 534 3.03E-50 T 11-10-2018 Clos_2109 860a7bf47464ee191324c76fcdf01520 541 Gene3D G3DSA:1.20.58.220 337 437 1.9E-13 T 11-10-2018 IPR038078 PhoU-like domain superfamily Clos_2109 860a7bf47464ee191324c76fcdf01520 541 Pfam PF01895 PhoU domain 448 532 1.8E-13 T 11-10-2018 IPR026022 PhoU domain Clos_2109 860a7bf47464ee191324c76fcdf01520 541 Pfam PF01895 PhoU domain 344 428 3.9E-11 T 11-10-2018 IPR026022 PhoU domain Clos_1737 16dcea36f6d546d9afa27da7391f315e 453 PRINTS PR00175 Sodium/alanine symporter signature 355 377 1.2E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_1737 16dcea36f6d546d9afa27da7391f315e 453 PRINTS PR00175 Sodium/alanine symporter signature 217 236 1.2E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_1737 16dcea36f6d546d9afa27da7391f315e 453 PRINTS PR00175 Sodium/alanine symporter signature 414 434 1.2E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_1737 16dcea36f6d546d9afa27da7391f315e 453 PRINTS PR00175 Sodium/alanine symporter signature 98 120 1.2E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_1737 16dcea36f6d546d9afa27da7391f315e 453 PRINTS PR00175 Sodium/alanine symporter signature 312 330 1.2E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_1737 16dcea36f6d546d9afa27da7391f315e 453 PRINTS PR00175 Sodium/alanine symporter signature 189 207 1.2E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_1737 16dcea36f6d546d9afa27da7391f315e 453 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 445 5.0E-161 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_1737 16dcea36f6d546d9afa27da7391f315e 453 Pfam PF01235 Sodium:alanine symporter family 59 450 1.3E-146 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_1068 a4847a5cd224d7e6b31d93b144018f9c 83 SUPERFAMILY SSF52833 5 81 7.83E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_1068 a4847a5cd224d7e6b31d93b144018f9c 83 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 8 81 7.2E-10 T 11-10-2018 Clos_1068 a4847a5cd224d7e6b31d93b144018f9c 83 Gene3D G3DSA:3.40.30.10 3 81 8.3E-12 T 11-10-2018 Clos_2316 94028aa7b4f8ee4c05a25610bed87458 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 2.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_2316 94028aa7b4f8ee4c05a25610bed87458 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_2316 94028aa7b4f8ee4c05a25610bed87458 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_2316 94028aa7b4f8ee4c05a25610bed87458 194 SUPERFAMILY SSF46689 8 78 1.49E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2316 94028aa7b4f8ee4c05a25610bed87458 194 Gene3D G3DSA:1.10.357.10 5 189 1.7E-18 T 11-10-2018 Clos_1679 45eb9e91d27b67113f3df8f34d23bff1 101 ProDom PD020942 TRANSPOSASE C TN554 TRANSPOSON TRANSPOSITION FOR DNA-BINDING TRANSPOSABLE DNA ELEMENT 27 98 3.0E-11 T 11-10-2018 Clos_2798 83631899d69e46b46d9f02bfe4292dd8 148 SUPERFAMILY SSF55658 1 57 3.14E-19 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Clos_2798 83631899d69e46b46d9f02bfe4292dd8 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 8.6E-47 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2798 83631899d69e46b46d9f02bfe4292dd8 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 3.1E-28 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal Clos_2798 83631899d69e46b46d9f02bfe4292dd8 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 27.002 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2798 83631899d69e46b46d9f02bfe4292dd8 148 Gene3D G3DSA:3.40.5.10 1 52 1.4E-26 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2798 83631899d69e46b46d9f02bfe4292dd8 148 Gene3D G3DSA:3.10.430.100 60 148 3.5E-29 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Clos_2798 83631899d69e46b46d9f02bfe4292dd8 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.3E-25 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2798 83631899d69e46b46d9f02bfe4292dd8 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2798 83631899d69e46b46d9f02bfe4292dd8 148 SUPERFAMILY SSF55653 57 147 6.15E-27 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Clos_0703 13c1879c3effc69e6c329ecda6fcf6b1 372 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 31 358 1.7E-123 T 11-10-2018 IPR039480 C-C bond lyase-like Clos_0703 13c1879c3effc69e6c329ecda6fcf6b1 372 Gene3D G3DSA:3.20.20.60 11 365 5.3E-13 T 11-10-2018 Clos_0703 13c1879c3effc69e6c329ecda6fcf6b1 372 PIRSF PIRSF015582 14 367 2.0E-62 T 11-10-2018 IPR011206 Citrate lyase beta subunit-like Clos_0703 13c1879c3effc69e6c329ecda6fcf6b1 372 SUPERFAMILY SSF51621 35 302 1.15E-17 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Clos_1808 66e324494bacd56d24159a9366d05c69 459 Pfam PF01554 MatE 20 180 8.3E-35 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_1808 66e324494bacd56d24159a9366d05c69 459 Pfam PF01554 MatE 249 408 2.5E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_1808 66e324494bacd56d24159a9366d05c69 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 417 1.1E-65 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_1808 66e324494bacd56d24159a9366d05c69 459 PIRSF PIRSF006603 1 456 3.8E-76 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 PIRSF PIRSF033722 1 124 7.9E-19 T 11-10-2018 IPR017019 Predicted DNA replication protein, bacterial Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 PIRSF PIRSF033722 103 362 9.7E-36 T 11-10-2018 IPR017019 Predicted DNA replication protein, bacterial Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 Gene3D G3DSA:1.10.10.630 236 311 3.9E-13 T 11-10-2018 IPR034829 DnaD-like domain superfamily Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 Gene3D G3DSA:1.10.10.630 147 225 1.4E-10 T 11-10-2018 IPR034829 DnaD-like domain superfamily Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 Pfam PF07261 Replication initiation and membrane attachment 154 226 8.0E-14 T 11-10-2018 IPR006343 DnaD domain Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 Pfam PF07261 Replication initiation and membrane attachment 249 310 4.2E-14 T 11-10-2018 IPR006343 DnaD domain Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 SUPERFAMILY SSF158499 151 219 4.45E-9 T 11-10-2018 IPR034829 DnaD-like domain superfamily Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 253 310 5.2E-10 T 11-10-2018 IPR006343 DnaD domain Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 157 223 4.5E-7 T 11-10-2018 IPR006343 DnaD domain Clos_2794 45ff6b79079a181e45ce9481dd653ed7 364 SUPERFAMILY SSF158499 241 304 4.18E-13 T 11-10-2018 IPR034829 DnaD-like domain superfamily Clos_2515 9f6dd56ed82f12d8f5df0025d9e5677f 351 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 329 3.4E-167 T 11-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 Clos_2515 9f6dd56ed82f12d8f5df0025d9e5677f 351 Gene3D G3DSA:3.90.25.30 174 315 6.9E-131 T 11-10-2018 Clos_2515 9f6dd56ed82f12d8f5df0025d9e5677f 351 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 296 336 2.4E-6 T 11-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 Clos_2515 9f6dd56ed82f12d8f5df0025d9e5677f 351 Pfam PF02719 Polysaccharide biosynthesis protein 7 286 1.7E-104 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Clos_2515 9f6dd56ed82f12d8f5df0025d9e5677f 351 SUPERFAMILY SSF51735 1 279 6.63E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_2515 9f6dd56ed82f12d8f5df0025d9e5677f 351 Gene3D G3DSA:3.40.50.720 4 313 6.9E-131 T 11-10-2018 Clos_1113 943cd83b2a15ca8a459d82f0a7a15d55 133 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 124 2.3E-24 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Clos_1113 943cd83b2a15ca8a459d82f0a7a15d55 133 SUPERFAMILY SSF52788 1 126 3.14E-37 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Clos_1113 943cd83b2a15ca8a459d82f0a7a15d55 133 Gene3D G3DSA:3.40.50.2300 2 132 2.1E-44 T 11-10-2018 Clos_1113 943cd83b2a15ca8a459d82f0a7a15d55 133 SMART SM00226 3 127 4.5E-44 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Clos_0972 3d541d99ffa59b110e1faf97530cd457 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 510 50.728 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0972 3d541d99ffa59b110e1faf97530cd457 511 SUPERFAMILY SSF64158 76 307 1.96E-89 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0972 3d541d99ffa59b110e1faf97530cd457 511 Pfam PF01676 Metalloenzyme superfamily 3 499 7.3E-77 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Clos_0972 3d541d99ffa59b110e1faf97530cd457 511 SUPERFAMILY SSF53649 2 508 7.33E-72 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Clos_0972 3d541d99ffa59b110e1faf97530cd457 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 297 8.8E-88 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0972 3d541d99ffa59b110e1faf97530cd457 511 Gene3D G3DSA:3.40.720.10 4 509 5.3E-224 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Clos_0972 3d541d99ffa59b110e1faf97530cd457 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 3 509 4.4E-221 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0972 3d541d99ffa59b110e1faf97530cd457 511 Gene3D G3DSA:3.40.1450.10 76 310 5.3E-224 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0972 3d541d99ffa59b110e1faf97530cd457 511 PIRSF PIRSF001492 1 511 4.8E-211 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Clos_0643 ba47f2b16ee551039954605de7bd7cf3 387 Gene3D G3DSA:3.30.70.1350 225 306 7.5E-18 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Clos_0643 ba47f2b16ee551039954605de7bd7cf3 387 Gene3D G3DSA:1.20.1510.10 29 223 2.2E-55 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Clos_0643 ba47f2b16ee551039954605de7bd7cf3 387 Pfam PF01545 Cation efflux family 32 223 2.5E-45 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Clos_0643 ba47f2b16ee551039954605de7bd7cf3 387 Pfam PF16916 Dimerisation domain of Zinc Transporter 228 303 1.7E-12 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Clos_0643 ba47f2b16ee551039954605de7bd7cf3 387 SUPERFAMILY SSF160240 226 305 3.14E-16 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Clos_0643 ba47f2b16ee551039954605de7bd7cf3 387 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 31 303 1.0E-59 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Clos_0643 ba47f2b16ee551039954605de7bd7cf3 387 SUPERFAMILY SSF161111 29 224 4.45E-52 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Clos_1383 8479464e4252b3a477daa8ec46d85691 240 Pfam PF05949 Bacterial protein of unknown function (DUF881) 92 234 3.3E-37 T 11-10-2018 IPR010273 Protein of unknown function DUF881 Clos_1383 8479464e4252b3a477daa8ec46d85691 240 Gene3D G3DSA:3.30.70.1880 88 240 9.0E-34 T 11-10-2018 Clos_0071 4a3aa65c436f01235ab7c74e963cae69 192 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 13 188 5.5E-40 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Clos_0071 4a3aa65c436f01235ab7c74e963cae69 192 SUPERFAMILY SSF53323 4 191 1.7E-42 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_0071 4a3aa65c436f01235ab7c74e963cae69 192 Gene3D G3DSA:3.40.920.10 3 192 1.8E-51 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_0645 79f04a7f16375e3e499b6ba9e42ccf66 122 SMART SM00345 15 74 8.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0645 79f04a7f16375e3e499b6ba9e42ccf66 122 SUPERFAMILY SSF46785 4 78 3.13E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0645 79f04a7f16375e3e499b6ba9e42ccf66 122 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.9E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0645 79f04a7f16375e3e499b6ba9e42ccf66 122 Gene3D G3DSA:1.10.10.10 8 122 7.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0902 91e5d06d8feb45b3c2f73788f3fe1330 302 Pfam PF13649 Methyltransferase domain 74 172 2.7E-12 T 11-10-2018 Clos_0902 91e5d06d8feb45b3c2f73788f3fe1330 302 SUPERFAMILY SSF53335 35 241 1.52E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0902 91e5d06d8feb45b3c2f73788f3fe1330 302 Gene3D G3DSA:3.40.50.150 25 302 1.4E-24 T 11-10-2018 Clos_1748 a22f3b70c22063d9055f7bd35fabb806 222 Pfam PF01467 Cytidylyltransferase-like 26 195 2.6E-33 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Clos_1748 a22f3b70c22063d9055f7bd35fabb806 222 Gene3D G3DSA:3.40.50.620 21 222 6.9E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_1748 a22f3b70c22063d9055f7bd35fabb806 222 SUPERFAMILY SSF52374 22 221 1.13E-55 T 11-10-2018 Clos_1748 a22f3b70c22063d9055f7bd35fabb806 222 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 88 8.4E-12 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Clos_1748 a22f3b70c22063d9055f7bd35fabb806 222 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 26 220 2.2E-59 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Clos_1748 a22f3b70c22063d9055f7bd35fabb806 222 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 22 221 32.51 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Clos_0933 3b4e0cf4956cf17f6e589c76324ad8ab 253 SUPERFAMILY SSF161098 56 238 9.94E-17 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0933 3b4e0cf4956cf17f6e589c76324ad8ab 253 Gene3D G3DSA:1.10.3720.10 48 243 9.2E-15 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0933 3b4e0cf4956cf17f6e589c76324ad8ab 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 244 1.3E-9 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_1923 9f537617592f462431a5826007b7c497 335 SMART SM00470 29 122 4.3E-16 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Clos_1923 9f537617592f462431a5826007b7c497 335 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 30 150 5.5E-20 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Clos_1923 9f537617592f462431a5826007b7c497 335 Gene3D G3DSA:3.90.1530.30 42 106 5.1E-18 T 11-10-2018 Clos_1923 9f537617592f462431a5826007b7c497 335 SUPERFAMILY SSF110849 28 142 1.15E-24 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Clos_1923 9f537617592f462431a5826007b7c497 335 Pfam PF02195 ParB-like nuclease domain 31 117 3.0E-17 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 Gene3D G3DSA:3.40.50.300 244 441 3.6E-29 T 11-10-2018 Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 Gene3D G3DSA:3.90.320.10 965 1197 1.6E-72 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 SUPERFAMILY SSF52540 3 863 7.57E-114 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 Pfam PF13361 UvrD-like helicase C-terminal domain 449 857 5.1E-29 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 1 1197 19.491 T 11-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 SUPERFAMILY SSF52980 988 1191 1.07E-33 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 438 2.0E-80 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 3 1193 0.0 T 11-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 Gene3D G3DSA:3.40.50.300 1 185 2.8E-37 T 11-10-2018 Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1023 1186 3.1E-8 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 Gene3D G3DSA:3.40.50.300 736 930 8.4E-43 T 11-10-2018 Clos_2290 b2d0254b710db7c07ff63142111a6f93 1197 Gene3D G3DSA:3.40.50.300 452 735 4.4E-48 T 11-10-2018 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 SUPERFAMILY SSF54570 2 84 7.59E-36 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 1.0E-45 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 Gene3D G3DSA:3.30.860.10 1 93 4.7E-41 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.5E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.5E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.5E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 Pfam PF00203 Ribosomal protein S19 3 83 9.1E-37 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.833 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0496 a006c37c8180855fefe29e5ccbf64356 93 PIRSF PIRSF002144 1 93 7.0E-34 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1969 4f0868ab3deb8b8c61c930bdc00d1256 837 Pfam PF12392 Collagenase 398 516 4.7E-25 T 11-10-2018 IPR020988 Peptidase U32, collagenase Clos_1969 4f0868ab3deb8b8c61c930bdc00d1256 837 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Clos_1969 4f0868ab3deb8b8c61c930bdc00d1256 837 Pfam PF01136 Peptidase family U32 75 308 7.0E-91 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Clos_1969 4f0868ab3deb8b8c61c930bdc00d1256 837 Pfam PF01136 Peptidase family U32 622 834 8.5E-15 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Clos_1969 4f0868ab3deb8b8c61c930bdc00d1256 837 SUPERFAMILY SSF110395 10 142 1.19E-5 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Clos_1609 1465eba958e48606e5e7f1ad9414e98c 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Clos_1609 1465eba958e48606e5e7f1ad9414e98c 295 Pfam PF00348 Polyprenyl synthetase 30 271 3.3E-56 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Clos_1609 1465eba958e48606e5e7f1ad9414e98c 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Clos_1609 1465eba958e48606e5e7f1ad9414e98c 295 Gene3D G3DSA:1.10.600.10 5 295 5.7E-96 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Clos_1609 1465eba958e48606e5e7f1ad9414e98c 295 SUPERFAMILY SSF48576 1 282 1.19E-82 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Clos_1520 ea9007d64043aff44175bf24623dcfb5 334 Pfam PF02163 Peptidase family M50 7 319 9.0E-74 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Clos_1520 ea9007d64043aff44175bf24623dcfb5 334 Gene3D G3DSA:2.30.42.10 118 201 7.0E-22 T 11-10-2018 Clos_1520 ea9007d64043aff44175bf24623dcfb5 334 Pfam PF13180 PDZ domain 119 180 2.1E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Clos_1520 ea9007d64043aff44175bf24623dcfb5 334 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 118 333 2.1E-52 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Clos_1520 ea9007d64043aff44175bf24623dcfb5 334 SMART SM00228 109 175 2.4E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Clos_1520 ea9007d64043aff44175bf24623dcfb5 334 SUPERFAMILY SSF50156 91 183 7.23E-20 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Clos_2734 616e9ab27e88b5604a479610af1a1c09 111 Gene3D G3DSA:2.20.25.10 1 41 1.2E-19 T 11-10-2018 Clos_2734 616e9ab27e88b5604a479610af1a1c09 111 Pfam PF03831 PhnA domain 44 111 1.5E-34 T 11-10-2018 IPR013988 PhnA protein, C-terminal Clos_2734 616e9ab27e88b5604a479610af1a1c09 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 4.6E-51 T 11-10-2018 IPR004624 PhnA protein Clos_2734 616e9ab27e88b5604a479610af1a1c09 111 Gene3D G3DSA:2.30.30.40 42 111 4.3E-36 T 11-10-2018 Clos_2734 616e9ab27e88b5604a479610af1a1c09 111 SUPERFAMILY SSF57783 3 36 1.7E-14 T 11-10-2018 Clos_2734 616e9ab27e88b5604a479610af1a1c09 111 SUPERFAMILY SSF82057 39 111 2.61E-30 T 11-10-2018 Clos_2734 616e9ab27e88b5604a479610af1a1c09 111 Pfam PF08274 PhnA Zinc-Ribbon 3 32 3.3E-16 T 11-10-2018 IPR013987 PhnA protein, N-terminal Clos_1712 bc16351a595f146e7f08cc425f9c2bd3 206 Gene3D G3DSA:3.60.15.10 1 205 1.9E-69 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_1712 bc16351a595f146e7f08cc425f9c2bd3 206 SMART SM00849 12 189 6.0E-45 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_1712 bc16351a595f146e7f08cc425f9c2bd3 206 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 53 73 - T 11-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 Clos_1712 bc16351a595f146e7f08cc425f9c2bd3 206 Pfam PF00753 Metallo-beta-lactamase superfamily 9 189 6.8E-33 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_1712 bc16351a595f146e7f08cc425f9c2bd3 206 SUPERFAMILY SSF56281 6 206 3.41E-57 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 Gene3D G3DSA:3.40.50.620 1 129 3.3E-41 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 Gene3D G3DSA:1.10.10.1360 130 212 1.4E-26 T 11-10-2018 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 383 429 9.9E-19 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 Pfam PF01171 PP-loop family 21 199 2.2E-52 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 204 6.9E-59 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 Pfam PF11734 TilS substrate C-terminal domain 383 450 1.5E-19 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 SUPERFAMILY SSF52402 7 233 3.96E-60 T 11-10-2018 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 SMART SM00977 383 455 2.7E-31 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 315 25.389 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 SUPERFAMILY SSF82829 212 320 3.92E-19 T 11-10-2018 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 SUPERFAMILY SSF56037 334 455 7.32E-25 T 11-10-2018 Clos_0431 c53afc1fc72e71fd49fac2329768d69b 463 Gene3D G3DSA:1.20.59.20 213 327 3.1E-11 T 11-10-2018 Clos_1220 0818fafa13737a929f15cf144a7ab2b0 225 Gene3D G3DSA:3.40.1500.20 10 225 4.3E-9 T 11-10-2018 Clos_0369 21232595ebca3096c759b95472189f4c 91 SMART SM00877 3 79 1.1E-36 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0369 21232595ebca3096c759b95472189f4c 91 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 49 1.0E-8 T 11-10-2018 Clos_0369 21232595ebca3096c759b95472189f4c 91 SUPERFAMILY SSF143414 3 88 1.1E-31 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_0369 21232595ebca3096c759b95472189f4c 91 Gene3D G3DSA:3.30.70.1710 1 91 4.6E-41 T 11-10-2018 Clos_0369 21232595ebca3096c759b95472189f4c 91 Pfam PF00936 BMC domain 4 79 8.2E-29 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_1085 567c4b5834e1943633b059b1d9f3630e 122 SUPERFAMILY SSF46785 24 114 2.12E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1085 567c4b5834e1943633b059b1d9f3630e 122 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 62 80 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Clos_1085 567c4b5834e1943633b059b1d9f3630e 122 Gene3D G3DSA:1.10.10.10 6 122 3.4E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1085 567c4b5834e1943633b059b1d9f3630e 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 71 9.3E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1085 567c4b5834e1943633b059b1d9f3630e 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 9.3E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1085 567c4b5834e1943633b059b1d9f3630e 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 88 103 9.3E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1085 567c4b5834e1943633b059b1d9f3630e 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 9.3E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1085 567c4b5834e1943633b059b1d9f3630e 122 SMART SM00418 39 117 1.4E-28 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1085 567c4b5834e1943633b059b1d9f3630e 122 Pfam PF01022 Bacterial regulatory protein, arsR family 46 91 1.1E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2512 b3921481fb5d089137f3b5b5ff648107 183 SUPERFAMILY SSF55729 3 162 1.55E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2512 b3921481fb5d089137f3b5b5ff648107 183 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 4 159 1.2E-39 T 11-10-2018 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase Clos_2512 b3921481fb5d089137f3b5b5ff648107 183 Gene3D G3DSA:3.40.630.30 1 172 3.1E-45 T 11-10-2018 Clos_2512 b3921481fb5d089137f3b5b5ff648107 183 Pfam PF13302 Acetyltransferase (GNAT) domain 3 136 1.2E-17 T 11-10-2018 IPR000182 GNAT domain Clos_2538 1e71b490ec605cad7cb4e18bb8c0bc6d 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 247 2.3E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2538 1e71b490ec605cad7cb4e18bb8c0bc6d 260 Gene3D G3DSA:1.10.3720.10 2 257 2.9E-45 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2538 1e71b490ec605cad7cb4e18bb8c0bc6d 260 SUPERFAMILY SSF161098 6 250 7.57E-54 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2360 93cf1ff400798ca004e761227091c6b3 218 Gene3D G3DSA:3.40.1080.10 3 215 2.9E-93 T 11-10-2018 Clos_2360 93cf1ff400798ca004e761227091c6b3 218 SMART SM00882 8 203 6.0E-66 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Clos_2360 93cf1ff400798ca004e761227091c6b3 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 210 2.6E-96 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 Clos_2360 93cf1ff400798ca004e761227091c6b3 218 SUPERFAMILY SSF100950 5 217 5.76E-72 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_2360 93cf1ff400798ca004e761227091c6b3 218 Pfam PF01144 Coenzyme A transferase 10 202 6.8E-42 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Clos_2360 93cf1ff400798ca004e761227091c6b3 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 46 54 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 Clos_1608 fb4463e791013b3fbf30cd1b60d722a9 149 Pfam PF02681 Divergent PAP2 family 9 143 2.6E-51 T 11-10-2018 IPR003832 Protein of unknown function DUF212 Clos_2719 c7a54695c63e815dcc9cb46b1e92e1f8 384 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 6 375 5.0E-85 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Clos_2719 c7a54695c63e815dcc9cb46b1e92e1f8 384 Gene3D G3DSA:3.30.300.210 223 377 5.7E-40 T 11-10-2018 IPR038501 Spore germination GerAC superfamily Clos_2719 c7a54695c63e815dcc9cb46b1e92e1f8 384 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 209 374 1.0E-36 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Clos_1827 00f3de00dec6bd6582f1e2b0b768ab17 312 Gene3D G3DSA:1.10.443.10 119 294 1.1E-42 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Clos_1827 00f3de00dec6bd6582f1e2b0b768ab17 312 Pfam PF13102 Phage integrase SAM-like domain 14 105 2.2E-10 T 11-10-2018 IPR025269 Phage integrase SAM-like domain Clos_1827 00f3de00dec6bd6582f1e2b0b768ab17 312 SUPERFAMILY SSF56349 2 289 3.24E-55 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Clos_1827 00f3de00dec6bd6582f1e2b0b768ab17 312 Gene3D G3DSA:1.10.150.130 1 118 1.5E-18 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Clos_1827 00f3de00dec6bd6582f1e2b0b768ab17 312 Pfam PF00589 Phage integrase family 122 288 7.3E-32 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Clos_2428 45065c13b3c644567b6b5b46a5b2ee18 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2428 45065c13b3c644567b6b5b46a5b2ee18 267 SMART SM00382 31 220 2.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2428 45065c13b3c644567b6b5b46a5b2ee18 267 Pfam PF00005 ABC transporter 23 170 1.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2428 45065c13b3c644567b6b5b46a5b2ee18 267 SUPERFAMILY SSF52540 7 233 3.91E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2428 45065c13b3c644567b6b5b46a5b2ee18 267 Gene3D G3DSA:3.40.50.300 1 258 6.1E-65 T 11-10-2018 Clos_1334 6a48150d01563f00959b53e9860ecd5e 499 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 322 438 5.4E-20 T 11-10-2018 IPR025299 CstA, C-terminal domain Clos_1334 6a48150d01563f00959b53e9860ecd5e 499 Pfam PF02554 Carbon starvation protein CstA 3 142 2.7E-25 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Clos_1334 6a48150d01563f00959b53e9860ecd5e 499 Pfam PF02554 Carbon starvation protein CstA 163 294 4.8E-8 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 Gene3D G3DSA:3.40.50.20 1 133 8.4E-40 T 11-10-2018 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 SUPERFAMILY SSF52440 3 143 1.06E-37 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 PIRSF PIRSF039102 1 366 2.2E-124 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 SUPERFAMILY SSF56059 144 362 9.9E-59 T 11-10-2018 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 358 43.497 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 Gene3D G3DSA:3.30.1490.20 159 231 1.8E-86 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 111 122 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 Pfam PF07478 D-ala D-ala ligase C-terminus 151 355 2.7E-79 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 357 8.8E-114 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 Gene3D G3DSA:3.30.470.20 134 357 1.8E-86 T 11-10-2018 Clos_0292 7efe4dc189404aa2697bd4ef571af5e3 368 Pfam PF01820 D-ala D-ala ligase N-terminus 5 133 5.3E-33 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2793 8e7e4c6d673d9538d65dc91b5ff7a7c6 500 Pfam PF01433 Peptidase family M1 domain 285 497 4.2E-28 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Clos_2793 8e7e4c6d673d9538d65dc91b5ff7a7c6 500 Gene3D G3DSA:1.10.390.60 267 500 2.3E-50 T 11-10-2018 Clos_2793 8e7e4c6d673d9538d65dc91b5ff7a7c6 500 SUPERFAMILY SSF55486 287 499 3.08E-46 T 11-10-2018 Clos_0175 708dcd6613bf849dff12ac4533757622 194 SUPERFAMILY SSF54001 8 165 3.24E-6 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Clos_0175 708dcd6613bf849dff12ac4533757622 194 Gene3D G3DSA:3.90.1720.10 8 167 1.4E-7 T 11-10-2018 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 SUPERFAMILY SSF55120 60 221 3.6E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 SUPERFAMILY SSF55174 1 53 3.34E-13 T 11-10-2018 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 Pfam PF01479 S4 domain 1 46 2.4E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 218 4.7E-51 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 Gene3D G3DSA:3.30.70.1560 126 199 8.7E-58 T 11-10-2018 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 Gene3D G3DSA:3.30.70.580 62 221 8.7E-58 T 11-10-2018 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 SMART SM00363 1 63 6.6E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 Gene3D G3DSA:3.10.290.10 1 55 1.2E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 Pfam PF00849 RNA pseudouridylate synthase 61 186 1.6E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1731 0c4f77a84047c701eaef8c857883d2b2 228 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 96 110 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Clos_0947 a9155a2b6bacdc883ce24fa99f4a3419 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 421 4.0E-58 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0947 a9155a2b6bacdc883ce24fa99f4a3419 448 Pfam PF01554 MatE 247 406 1.4E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0947 a9155a2b6bacdc883ce24fa99f4a3419 448 Pfam PF01554 MatE 22 184 8.9E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0947 a9155a2b6bacdc883ce24fa99f4a3419 448 PIRSF PIRSF006603 2 447 5.0E-82 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_1767 4842aa62b4aefb3c22051d028e29b23e 192 Hamap MF_00528 Septum formation protein Maf [maf]. 3 190 29.879 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Clos_1767 4842aa62b4aefb3c22051d028e29b23e 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 1.3E-57 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Clos_1767 4842aa62b4aefb3c22051d028e29b23e 192 Gene3D G3DSA:3.90.950.10 1 189 2.3E-68 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Clos_1767 4842aa62b4aefb3c22051d028e29b23e 192 Pfam PF02545 Maf-like protein 3 185 5.8E-61 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Clos_1767 4842aa62b4aefb3c22051d028e29b23e 192 SUPERFAMILY SSF52972 2 185 1.11E-62 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Clos_1767 4842aa62b4aefb3c22051d028e29b23e 192 PIRSF PIRSF006305 1 191 7.4E-62 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Clos_2120 b8e8cd0d80e59222f025e325c9ad427c 211 Gene3D G3DSA:3.40.50.150 1 209 4.4E-62 T 11-10-2018 Clos_2120 b8e8cd0d80e59222f025e325c9ad427c 211 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 27 208 1.9E-52 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Clos_2120 b8e8cd0d80e59222f025e325c9ad427c 211 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 211 28.078 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Clos_2120 b8e8cd0d80e59222f025e325c9ad427c 211 Pfam PF02390 Putative methyltransferase 37 206 8.9E-44 T 11-10-2018 Clos_2120 b8e8cd0d80e59222f025e325c9ad427c 211 SUPERFAMILY SSF53335 35 208 1.15E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 41.828 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 SMART SM00881 4 100 2.8E-29 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 Pfam PF02629 CoA binding domain 6 99 1.2E-28 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.0E-35 T 11-10-2018 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.0E-35 T 11-10-2018 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.0E-35 T 11-10-2018 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.0E-35 T 11-10-2018 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 Gene3D G3DSA:3.40.50.261 124 289 2.5E-70 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 Gene3D G3DSA:3.40.50.720 2 123 4.2E-50 T 11-10-2018 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 Pfam PF00549 CoA-ligase 151 262 9.3E-17 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 PIRSF PIRSF001553 1 291 8.5E-130 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 SUPERFAMILY SSF52210 123 287 1.31E-54 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 3.1E-141 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Clos_0624 6dcfac300f1022c2456e2ffb9097857f 300 SUPERFAMILY SSF51735 1 122 3.15E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 PRINTS PR00471 Acetate kinase family signature 323 339 1.2E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 PRINTS PR00471 Acetate kinase family signature 3 14 1.2E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 PRINTS PR00471 Acetate kinase family signature 377 389 1.2E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 PRINTS PR00471 Acetate kinase family signature 301 314 1.2E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 PRINTS PR00471 Acetate kinase family signature 204 225 1.2E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 PRINTS PR00471 Acetate kinase family signature 174 187 1.2E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 Gene3D G3DSA:3.30.420.40 197 397 1.8E-87 T 11-10-2018 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 201.327 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 Pfam PF00871 Acetokinase family 2 390 6.9E-171 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 PIRSF PIRSF000722 1 397 4.5E-161 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 SUPERFAMILY SSF53067 160 392 4.53E-93 T 11-10-2018 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 SUPERFAMILY SSF53067 1 197 1.81E-73 T 11-10-2018 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 TIGRFAM TIGR00016 ackA: acetate kinase 1 392 8.2E-169 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Clos_1447 8464e8273b4837ee3bbcc46dad82eb73 397 Gene3D G3DSA:3.30.420.40 1 196 1.8E-81 T 11-10-2018 Clos_2714 ccbf558c0d2b9a3aaad05ba0d8824247 652 Pfam PF07664 Ferrous iron transport protein B C terminus 398 449 6.7E-14 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Clos_2714 ccbf558c0d2b9a3aaad05ba0d8824247 652 Gene3D G3DSA:3.40.50.300 1 203 1.3E-39 T 11-10-2018 Clos_2714 ccbf558c0d2b9a3aaad05ba0d8824247 652 Pfam PF07670 Nucleoside recognition 454 583 6.1E-20 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_2714 ccbf558c0d2b9a3aaad05ba0d8824247 652 Pfam PF07670 Nucleoside recognition 293 385 9.7E-9 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_2714 ccbf558c0d2b9a3aaad05ba0d8824247 652 Pfam PF02421 Ferrous iron transport protein B 2 158 5.3E-56 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Clos_2714 ccbf558c0d2b9a3aaad05ba0d8824247 652 SUPERFAMILY SSF52540 1 170 4.05E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0776 9761b97ab0d36c717b98768e22729c66 67 Pfam PF04070 Domain of unknown function (DUF378) 1 57 1.4E-25 T 11-10-2018 IPR007211 Protein of unknown function DUF378 Clos_0848 c52ca7347757cd4c08d9ab4735522739 139 SMART SM00347 24 124 1.3E-22 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0848 c52ca7347757cd4c08d9ab4735522739 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.2E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0848 c52ca7347757cd4c08d9ab4735522739 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.2E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0848 c52ca7347757cd4c08d9ab4735522739 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 3.2E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0848 c52ca7347757cd4c08d9ab4735522739 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.2E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_0848 c52ca7347757cd4c08d9ab4735522739 139 Gene3D G3DSA:1.10.10.10 1 137 9.7E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0848 c52ca7347757cd4c08d9ab4735522739 139 SUPERFAMILY SSF46785 1 136 1.55E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0848 c52ca7347757cd4c08d9ab4735522739 139 Pfam PF01047 MarR family 31 88 1.9E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 Gene3D G3DSA:3.40.50.720 5 325 1.2E-128 T 11-10-2018 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 SUPERFAMILY SSF55347 128 315 1.31E-72 T 11-10-2018 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 PIRSF PIRSF000148 2 330 1.2E-122 T 11-10-2018 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 5.4E-27 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 314 3.7E-51 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 328 34.414 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 Gene3D G3DSA:3.30.360.10 127 311 1.2E-128 T 11-10-2018 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 SMART SM00859 4 120 2.9E-33 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 327 2.1E-125 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Clos_1162 52a07fc13c94eb97ce9086fda4f80fe5 331 SUPERFAMILY SSF51735 3 156 6.75E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1390 4eb4c67e6991a84cf131defd43d510aa 154 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 86.255 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Clos_1390 4eb4c67e6991a84cf131defd43d510aa 154 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 9.4E-66 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Clos_1390 4eb4c67e6991a84cf131defd43d510aa 154 Pfam PF03477 ATP cone domain 50 136 1.2E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Clos_2541 491a8c38d940e7a2dae893e08c15729b 169 SUPERFAMILY SSF47240 8 165 2.07E-22 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_2541 491a8c38d940e7a2dae893e08c15729b 169 Pfam PF07875 Coat F domain 108 168 1.0E-22 T 11-10-2018 IPR012851 Spore coat protein CotF-like Clos_2541 491a8c38d940e7a2dae893e08c15729b 169 Pfam PF13668 Ferritin-like domain 27 66 5.9E-5 T 11-10-2018 Clos_2541 491a8c38d940e7a2dae893e08c15729b 169 Gene3D G3DSA:1.20.5.420 12 60 6.2E-8 T 11-10-2018 Clos_0115 b32fa81e2e0276ca71ea595e21ebe4b6 276 Gene3D G3DSA:3.20.20.140 9 250 3.5E-55 T 11-10-2018 Clos_0115 b32fa81e2e0276ca71ea595e21ebe4b6 276 SUPERFAMILY SSF89550 7 252 2.94E-37 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Clos_0115 b32fa81e2e0276ca71ea595e21ebe4b6 276 Gene3D G3DSA:1.10.150.650 101 170 3.5E-55 T 11-10-2018 Clos_0115 b32fa81e2e0276ca71ea595e21ebe4b6 276 Pfam PF02811 PHP domain 10 104 1.9E-6 T 11-10-2018 IPR004013 PHP domain GO:0003824 Clos_0115 b32fa81e2e0276ca71ea595e21ebe4b6 276 SMART SM00481 9 73 8.3E-6 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 127 6.4E-42 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 SUPERFAMILY SSF116878 128 461 7.85E-50 T 11-10-2018 Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 Gene3D G3DSA:3.40.50.300 224 388 2.9E-111 T 11-10-2018 Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 Gene3D G3DSA:3.30.1360.120 1 127 2.2E-49 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 373 2.1E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 SUPERFAMILY SSF52540 81 378 2.87E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 Gene3D G3DSA:1.20.120.430 128 461 2.9E-111 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 Pfam PF12631 MnmE helical domain 130 458 1.3E-58 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 461 35.594 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 461 3.3E-134 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Clos_2872 58a71841ff9f1c3306180b13cb34e4d2 461 Pfam PF01926 50S ribosome-binding GTPase 227 338 1.4E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_0130 801cac874bd3ef484e40041a95d2db1c 169 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 8 163 1.9E-46 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_0130 801cac874bd3ef484e40041a95d2db1c 169 SUPERFAMILY SSF51306 24 168 2.51E-46 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Clos_0130 801cac874bd3ef484e40041a95d2db1c 169 Pfam PF00717 Peptidase S24-like 31 98 1.3E-17 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Clos_0130 801cac874bd3ef484e40041a95d2db1c 169 ProSitePatterns PS00761 Signal peptidases I signature 3. 125 138 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Clos_0130 801cac874bd3ef484e40041a95d2db1c 169 Gene3D G3DSA:2.10.109.10 33 160 8.6E-35 T 11-10-2018 Clos_0130 801cac874bd3ef484e40041a95d2db1c 169 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 75 87 7.8E-18 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_0130 801cac874bd3ef484e40041a95d2db1c 169 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 120 139 7.8E-18 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_0130 801cac874bd3ef484e40041a95d2db1c 169 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 7.8E-18 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_2297 7ca278cf727d0b2f393b92bb06df43df 80 Gene3D G3DSA:3.30.70.790 9 79 1.3E-5 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 Clos_2297 7ca278cf727d0b2f393b92bb06df43df 80 SUPERFAMILY SSF54913 10 76 1.85E-11 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Clos_2297 7ca278cf727d0b2f393b92bb06df43df 80 Pfam PF09413 Putative prokaryotic signal transducing protein 11 77 1.0E-15 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 SUPERFAMILY SSF64518 1 536 2.62E-95 T 11-10-2018 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 139 1.4E-45 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 Gene3D G3DSA:1.20.58.1830 3 536 1.6E-106 T 11-10-2018 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 Gene3D G3DSA:1.20.1330.10 43 496 1.6E-106 T 11-10-2018 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 PRINTS PR00207 Flagellin signature 74 93 3.2E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 PRINTS PR00207 Flagellin signature 109 132 3.2E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 PRINTS PR00207 Flagellin signature 35 52 3.2E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 Pfam PF00700 Bacterial flagellin C-terminal helical region 453 536 1.5E-27 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 Gene3D G3DSA:2.30.220.10 209 313 1.6E-106 T 11-10-2018 Clos_2479 ff8bf7656ebf390e8f3bbe1e7c38d37f 538 Gene3D G3DSA:2.170.280.10 192 444 1.6E-106 T 11-10-2018 Clos_1663 aa9da9fb19d8d285ee4c49ae2dce38ba 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 138 27.462 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Clos_1663 aa9da9fb19d8d285ee4c49ae2dce38ba 139 SUPERFAMILY SSF53098 2 136 5.46E-45 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_1663 aa9da9fb19d8d285ee4c49ae2dce38ba 139 SMART SM00732 2 103 3.2E-39 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Clos_1663 aa9da9fb19d8d285ee4c49ae2dce38ba 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 135 2.0E-48 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Clos_1663 aa9da9fb19d8d285ee4c49ae2dce38ba 139 Gene3D G3DSA:3.30.420.140 2 139 1.2E-48 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Clos_1663 aa9da9fb19d8d285ee4c49ae2dce38ba 139 Pfam PF03652 Holliday junction resolvase 3 136 3.0E-46 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Clos_2019 612f34afe7bf5ebb1e9d432f85529dfb 298 SUPERFAMILY SSF53850 40 192 7.33E-48 T 11-10-2018 Clos_2019 612f34afe7bf5ebb1e9d432f85529dfb 298 SUPERFAMILY SSF53850 195 296 1.78E-28 T 11-10-2018 Clos_2019 612f34afe7bf5ebb1e9d432f85529dfb 298 Gene3D G3DSA:3.40.190.230 41 296 3.5E-118 T 11-10-2018 Clos_2019 612f34afe7bf5ebb1e9d432f85529dfb 298 Gene3D G3DSA:3.10.105.10 122 278 3.5E-118 T 11-10-2018 Clos_2019 612f34afe7bf5ebb1e9d432f85529dfb 298 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 37 177 3.1E-41 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Clos_2019 612f34afe7bf5ebb1e9d432f85529dfb 298 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 197 296 8.5E-22 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Clos_0580 74d73d984676e0041701633209f50232 301 SUPERFAMILY SSF55116 6 183 1.18E-70 T 11-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_0580 74d73d984676e0041701633209f50232 301 SMART SM01222 6 183 4.6E-111 T 11-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_0580 74d73d984676e0041701633209f50232 301 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 8 182 2.0E-72 T 11-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_0580 74d73d984676e0041701633209f50232 301 SUPERFAMILY SSF55116 184 300 6.28E-47 T 11-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_0580 74d73d984676e0041701633209f50232 301 SMART SM01221 184 298 1.6E-73 T 11-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0580 74d73d984676e0041701633209f50232 301 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 5 301 2.3E-130 T 11-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0580 74d73d984676e0041701633209f50232 301 Gene3D G3DSA:3.30.990.10 4 183 1.6E-67 T 11-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Clos_0580 74d73d984676e0041701633209f50232 301 Pfam PF02971 Formiminotransferase domain 185 288 5.9E-25 T 11-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0580 74d73d984676e0041701633209f50232 301 Gene3D G3DSA:3.30.70.670 185 300 3.2E-37 T 11-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Clos_0715 9a69c0ccc8c9e2f96e6227b4d46962d1 318 Pfam PF04055 Radical SAM superfamily 44 204 2.8E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_0715 9a69c0ccc8c9e2f96e6227b4d46962d1 318 SMART SM00729 24 252 9.8E-36 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_0715 9a69c0ccc8c9e2f96e6227b4d46962d1 318 Pfam PF16199 Radical_SAM C-terminal domain 214 296 4.3E-20 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 Clos_0715 9a69c0ccc8c9e2f96e6227b4d46962d1 318 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 8 307 4.9E-99 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 Clos_0715 9a69c0ccc8c9e2f96e6227b4d46962d1 318 SUPERFAMILY SSF102114 9 273 1.22E-45 T 11-10-2018 Clos_0715 9a69c0ccc8c9e2f96e6227b4d46962d1 318 Gene3D G3DSA:3.80.30.20 66 266 1.4E-15 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Clos_1940 0b0902ecd77398cbfec31e52103d5a11 317 SUPERFAMILY SSF51735 1 310 2.55E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1940 0b0902ecd77398cbfec31e52103d5a11 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 241 3.7E-31 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Clos_1940 0b0902ecd77398cbfec31e52103d5a11 317 Gene3D G3DSA:3.40.50.720 1 312 3.5E-113 T 11-10-2018 Clos_0590 b8e7904f3549af4ad8b12cd901f04088 452 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 15 442 1.7E-160 T 11-10-2018 Clos_0590 b8e7904f3549af4ad8b12cd901f04088 452 SUPERFAMILY SSF53335 67 449 1.05E-90 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0590 b8e7904f3549af4ad8b12cd901f04088 452 Gene3D G3DSA:3.40.1350.30 126 281 1.4E-121 T 11-10-2018 Clos_0590 b8e7904f3549af4ad8b12cd901f04088 452 SUPERFAMILY SSF50249 3 59 2.0E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0590 b8e7904f3549af4ad8b12cd901f04088 452 Gene3D G3DSA:3.40.50.150 80 443 1.4E-121 T 11-10-2018 Clos_0590 b8e7904f3549af4ad8b12cd901f04088 452 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 192 449 2.0E-20 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Clos_0590 b8e7904f3549af4ad8b12cd901f04088 452 Gene3D G3DSA:2.40.50.140 2 78 1.5E-20 T 11-10-2018 Clos_0590 b8e7904f3549af4ad8b12cd901f04088 452 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 380 411 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site Clos_1739 026f4e303192684e46f666d72a16a87b 207 Gene3D G3DSA:3.10.560.10 49 149 1.3E-9 T 11-10-2018 Clos_1739 026f4e303192684e46f666d72a16a87b 207 Pfam PF10531 SLBB domain 62 112 5.8E-13 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_1739 026f4e303192684e46f666d72a16a87b 207 Gene3D G3DSA:1.10.150.310 150 207 1.6E-13 T 11-10-2018 Clos_1739 026f4e303192684e46f666d72a16a87b 207 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 140 206 4.2E-17 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Clos_1739 026f4e303192684e46f666d72a16a87b 207 SMART SM00278 184 203 150.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_1739 026f4e303192684e46f666d72a16a87b 207 SMART SM00278 154 173 0.01 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_1739 026f4e303192684e46f666d72a16a87b 207 Pfam PF12836 Helix-hairpin-helix motif 143 205 8.1E-23 T 11-10-2018 Clos_1739 026f4e303192684e46f666d72a16a87b 207 SUPERFAMILY SSF47781 134 206 2.45E-28 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_0572 e0bb033fa4520a8d384985a5b04c1f5e 452 SUPERFAMILY SSF53850 65 443 1.32E-57 T 11-10-2018 Clos_0572 e0bb033fa4520a8d384985a5b04c1f5e 452 Pfam PF13416 Bacterial extracellular solute-binding protein 77 383 1.4E-27 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein Clos_0572 e0bb033fa4520a8d384985a5b04c1f5e 452 Gene3D G3DSA:3.40.190.10 75 406 2.8E-70 T 11-10-2018 Clos_0572 e0bb033fa4520a8d384985a5b04c1f5e 452 Gene3D G3DSA:3.40.190.10 168 443 2.8E-70 T 11-10-2018 Clos_1967 992d4fab39f86a2332282de50481bf23 163 Gene3D G3DSA:3.30.70.990 12 101 1.6E-64 T 11-10-2018 IPR035570 UPF0234, N-terminal Clos_1967 992d4fab39f86a2332282de50481bf23 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 7.9E-66 T 11-10-2018 IPR007551 Protein of unknown function DUF520 Clos_1967 992d4fab39f86a2332282de50481bf23 163 SUPERFAMILY SSF89963 92 163 2.25E-29 T 11-10-2018 IPR036183 YajQ-like superfamily Clos_1967 992d4fab39f86a2332282de50481bf23 163 SUPERFAMILY SSF89963 5 89 4.71E-29 T 11-10-2018 IPR036183 YajQ-like superfamily Clos_1967 992d4fab39f86a2332282de50481bf23 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 26.668 T 11-10-2018 IPR007551 Protein of unknown function DUF520 Clos_1967 992d4fab39f86a2332282de50481bf23 163 Gene3D G3DSA:3.30.70.860 6 163 1.6E-64 T 11-10-2018 IPR035571 UPF0234-like, C-terminal Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 SMART SM01403 9 103 6.2E-60 T 11-10-2018 IPR027486 Ribosomal protein S10 domain Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 6 103 4.9E-46 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 Gene3D G3DSA:3.30.70.600 3 104 2.0E-38 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 PRINTS PR00971 Ribosomal protein S10 family signature 63 77 1.6E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 PRINTS PR00971 Ribosomal protein S10 family signature 42 57 1.6E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 PRINTS PR00971 Ribosomal protein S10 family signature 7 20 1.6E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 ProSitePatterns PS00361 Ribosomal protein S10 signature. 31 46 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 5 104 27.719 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 SUPERFAMILY SSF54999 7 104 2.49E-38 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Clos_0491 c7d0fa3070a78f22a6c4e0aa2def0ee5 104 Pfam PF00338 Ribosomal protein S10p/S20e 9 103 1.8E-36 T 11-10-2018 IPR027486 Ribosomal protein S10 domain Clos_0931 e4fd1a90abe5ac285bc6df7f1b0556cf 81 Gene3D G3DSA:3.30.70.1150 1 81 1.1E-33 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Clos_0931 e4fd1a90abe5ac285bc6df7f1b0556cf 81 TIGRFAM TIGR03959 hyd_TM1266: putative iron-only hydrogenase system regulator 4 78 2.4E-35 T 11-10-2018 IPR023860 [FeFe]-hydrogenase system regulator TM1266 Clos_0931 e4fd1a90abe5ac285bc6df7f1b0556cf 81 SUPERFAMILY SSF55021 2 79 6.56E-27 T 11-10-2018 Clos_1006 777aef9c2cb567bc653c1faaef8bbd7d 274 Gene3D G3DSA:3.30.1360.130 118 261 1.5E-97 T 11-10-2018 Clos_1006 777aef9c2cb567bc653c1faaef8bbd7d 274 Pfam PF04951 D-aminopeptidase 1 262 1.0E-96 T 11-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Clos_1006 777aef9c2cb567bc653c1faaef8bbd7d 274 PIRSF PIRSF015853 1 274 2.1E-89 T 11-10-2018 IPR007035 Peptidase M55, D-aminopeptidase Clos_1006 777aef9c2cb567bc653c1faaef8bbd7d 274 Gene3D G3DSA:3.40.50.10780 1 215 1.5E-97 T 11-10-2018 IPR027476 D-aminopeptidase, N-terminal Clos_1006 777aef9c2cb567bc653c1faaef8bbd7d 274 SUPERFAMILY SSF63992 1 271 9.68E-88 T 11-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily Clos_1710 fc8444574c057be157bff253dc04885b 421 Gene3D G3DSA:3.30.930.10 3 322 4.8E-118 T 11-10-2018 Clos_1710 fc8444574c057be157bff253dc04885b 421 Pfam PF13393 Histidyl-tRNA synthetase 8 309 2.5E-49 T 11-10-2018 Clos_1710 fc8444574c057be157bff253dc04885b 421 PIRSF PIRSF001549 1 418 4.7E-122 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Clos_1710 fc8444574c057be157bff253dc04885b 421 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 419 33.566 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Clos_1710 fc8444574c057be157bff253dc04885b 421 Pfam PF03129 Anticodon binding domain 328 413 2.7E-11 T 11-10-2018 IPR004154 Anticodon-binding Clos_1710 fc8444574c057be157bff253dc04885b 421 SUPERFAMILY SSF52954 326 412 1.44E-21 T 11-10-2018 Clos_1710 fc8444574c057be157bff253dc04885b 421 Gene3D G3DSA:3.40.50.800 325 418 2.9E-22 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Clos_1710 fc8444574c057be157bff253dc04885b 421 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 407 2.3E-154 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Clos_1710 fc8444574c057be157bff253dc04885b 421 SUPERFAMILY SSF55681 5 318 2.19E-99 T 11-10-2018 Clos_2141 a3f8dbcf309015931094c18e8de81bba 228 Pfam PF12800 4Fe-4S binding domain 65 78 0.16 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2141 a3f8dbcf309015931094c18e8de81bba 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 166 177 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2141 a3f8dbcf309015931094c18e8de81bba 228 Pfam PF00037 4Fe-4S binding domain 160 179 5.2E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2141 a3f8dbcf309015931094c18e8de81bba 228 Pfam PF00037 4Fe-4S binding domain 191 209 1.3E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2141 a3f8dbcf309015931094c18e8de81bba 228 Gene3D G3DSA:3.30.70.20 56 155 4.1E-10 T 11-10-2018 Clos_2141 a3f8dbcf309015931094c18e8de81bba 228 SUPERFAMILY SSF54862 57 222 1.32E-33 T 11-10-2018 Clos_2141 a3f8dbcf309015931094c18e8de81bba 228 Gene3D G3DSA:3.30.70.20 160 211 8.8E-10 T 11-10-2018 Clos_0066 e262d1d5d5c9488700e3481556387e13 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 6 126 1.8E-43 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Clos_0066 e262d1d5d5c9488700e3481556387e13 127 SUPERFAMILY SSF51230 5 125 1.11E-40 T 11-10-2018 IPR011053 Single hybrid motif Clos_0066 e262d1d5d5c9488700e3481556387e13 127 Pfam PF01597 Glycine cleavage H-protein 7 125 1.7E-42 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Clos_0066 e262d1d5d5c9488700e3481556387e13 127 Gene3D G3DSA:2.40.50.100 2 127 5.1E-49 T 11-10-2018 Clos_0066 e262d1d5d5c9488700e3481556387e13 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 124 37.486 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Clos_1487 0304466952835f6621551dff4a53f427 128 Pfam PF12611 Putative flagellar 104 127 1.6E-11 T 11-10-2018 IPR013367 Flagellar, putative Clos_1487 0304466952835f6621551dff4a53f427 128 TIGRFAM TIGR02530 flg_new: flagellar operon protein 33 126 6.3E-33 T 11-10-2018 IPR013367 Flagellar, putative Clos_1839 43bfa2ce3875665093b79881e5bf57d8 438 Gene3D G3DSA:1.10.8.260 298 363 9.4E-132 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily Clos_1839 43bfa2ce3875665093b79881e5bf57d8 438 Gene3D G3DSA:3.50.50.60 32 429 9.4E-132 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1839 43bfa2ce3875665093b79881e5bf57d8 438 SUPERFAMILY SSF160996 218 381 1.09E-35 T 11-10-2018 Clos_1839 43bfa2ce3875665093b79881e5bf57d8 438 SUPERFAMILY SSF51905 29 435 2.91E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1839 43bfa2ce3875665093b79881e5bf57d8 438 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 30 432 6.2E-139 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Clos_1839 43bfa2ce3875665093b79881e5bf57d8 438 Gene3D G3DSA:2.40.30.10 217 380 9.4E-132 T 11-10-2018 Clos_1839 43bfa2ce3875665093b79881e5bf57d8 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 29 51 2.3E-6 T 11-10-2018 Clos_1839 43bfa2ce3875665093b79881e5bf57d8 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 184 193 2.3E-6 T 11-10-2018 Clos_1839 43bfa2ce3875665093b79881e5bf57d8 438 Pfam PF03486 HI0933-like protein 29 433 1.3E-127 T 11-10-2018 Clos_2673 07f3d7f403b927ef40c8de6328a82db8 250 PIRSF PIRSF038953 6 247 3.6E-64 T 11-10-2018 IPR014244 RNA polymerase sigma-I type Clos_2673 07f3d7f403b927ef40c8de6328a82db8 250 Pfam PF04542 Sigma-70 region 2 32 102 5.3E-8 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2673 07f3d7f403b927ef40c8de6328a82db8 250 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 18 234 2.0E-58 T 11-10-2018 IPR014244 RNA polymerase sigma-I type Clos_2673 07f3d7f403b927ef40c8de6328a82db8 250 SUPERFAMILY SSF88946 20 100 3.3E-16 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2673 07f3d7f403b927ef40c8de6328a82db8 250 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 13 236 25.498 T 11-10-2018 IPR014244 RNA polymerase sigma-I type Clos_2673 07f3d7f403b927ef40c8de6328a82db8 250 Gene3D G3DSA:1.10.1740.10 16 99 8.8E-10 T 11-10-2018 Clos_2284 940fab09694309718ac609cf8d7cfe00 271 SUPERFAMILY SSF53850 44 269 3.86E-63 T 11-10-2018 Clos_2284 940fab09694309718ac609cf8d7cfe00 271 PIRSF PIRSF004846 1 271 2.7E-80 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Clos_2284 940fab09694309718ac609cf8d7cfe00 271 Gene3D G3DSA:3.40.190.10 124 230 1.7E-77 T 11-10-2018 Clos_2284 940fab09694309718ac609cf8d7cfe00 271 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 50 266 4.5E-63 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Clos_2284 940fab09694309718ac609cf8d7cfe00 271 Pfam PF13531 Bacterial extracellular solute-binding protein 45 267 2.2E-44 T 11-10-2018 Clos_2284 940fab09694309718ac609cf8d7cfe00 271 Gene3D G3DSA:3.40.190.10 47 267 1.7E-77 T 11-10-2018 Clos_2749 4242670175803934ed7783cf10c3b851 167 Pfam PF00881 Nitroreductase family 64 146 1.3E-8 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Clos_2749 4242670175803934ed7783cf10c3b851 167 Pfam PF00881 Nitroreductase family 4 58 3.4E-17 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Clos_2749 4242670175803934ed7783cf10c3b851 167 SUPERFAMILY SSF55469 3 163 1.96E-48 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_2749 4242670175803934ed7783cf10c3b851 167 Gene3D G3DSA:3.40.109.10 1 167 3.0E-52 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_1432 d7483764b79f790580eb1dbfa4abdf25 343 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 342 2.7E-133 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Clos_1432 d7483764b79f790580eb1dbfa4abdf25 343 Gene3D G3DSA:1.10.150.530 3 63 7.5E-21 T 11-10-2018 Clos_1432 d7483764b79f790580eb1dbfa4abdf25 343 PIRSF PIRSF006004 2 343 1.8E-134 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Clos_1432 d7483764b79f790580eb1dbfa4abdf25 343 Pfam PF04055 Radical SAM superfamily 106 271 5.9E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1432 d7483764b79f790580eb1dbfa4abdf25 343 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 342 74.406 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Clos_1432 d7483764b79f790580eb1dbfa4abdf25 343 Gene3D G3DSA:3.20.20.70 66 327 4.3E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1432 d7483764b79f790580eb1dbfa4abdf25 343 SUPERFAMILY SSF102114 99 298 1.31E-15 T 11-10-2018 Clos_1432 d7483764b79f790580eb1dbfa4abdf25 343 Pfam PF13394 4Fe-4S single cluster domain 111 199 9.3E-8 T 11-10-2018 Clos_0223 095283c11db088f3b2c26dc44ba5c010 399 Gene3D G3DSA:3.40.190.10 204 314 2.9E-14 T 11-10-2018 Clos_0223 095283c11db088f3b2c26dc44ba5c010 399 SUPERFAMILY SSF140683 3 69 4.97E-8 T 11-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily Clos_0223 095283c11db088f3b2c26dc44ba5c010 399 Pfam PF13343 Bacterial extracellular solute-binding protein 144 378 4.8E-53 T 11-10-2018 Clos_0223 095283c11db088f3b2c26dc44ba5c010 399 Gene3D G3DSA:3.40.190.10 102 344 2.9E-14 T 11-10-2018 Clos_0223 095283c11db088f3b2c26dc44ba5c010 399 SUPERFAMILY SSF53850 103 398 5.43E-20 T 11-10-2018 Clos_1541 19fbefe00854751085ca44b46dec7e72 178 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 4.5E-18 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Clos_1541 19fbefe00854751085ca44b46dec7e72 178 Gene3D G3DSA:1.20.120.1760 3 177 1.3E-14 T 11-10-2018 Clos_1541 19fbefe00854751085ca44b46dec7e72 178 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Clos_1541 19fbefe00854751085ca44b46dec7e72 178 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 175 4.6E-55 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Clos_1541 19fbefe00854751085ca44b46dec7e72 178 PIRSF PIRSF000847 1 178 1.2E-52 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Clos_2483 7d3b4c9e49b82dfaffb2fc7a1ccc6d5f 791 Pfam PF02743 Cache domain 57 283 1.0E-23 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_2483 7d3b4c9e49b82dfaffb2fc7a1ccc6d5f 791 Gene3D G3DSA:1.10.287.950 376 677 1.0E-64 T 11-10-2018 Clos_2483 7d3b4c9e49b82dfaffb2fc7a1ccc6d5f 791 SUPERFAMILY SSF58104 341 677 1.44E-68 T 11-10-2018 Clos_2483 7d3b4c9e49b82dfaffb2fc7a1ccc6d5f 791 SMART SM00283 402 670 1.8E-57 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2483 7d3b4c9e49b82dfaffb2fc7a1ccc6d5f 791 Gene3D G3DSA:3.30.450.20 99 193 1.9E-11 T 11-10-2018 Clos_2483 7d3b4c9e49b82dfaffb2fc7a1ccc6d5f 791 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 447 630 1.9E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2483 7d3b4c9e49b82dfaffb2fc7a1ccc6d5f 791 Gene3D G3DSA:1.20.1480.50 281 375 3.0E-13 T 11-10-2018 Clos_2483 7d3b4c9e49b82dfaffb2fc7a1ccc6d5f 791 Pfam PF00672 HAMP domain 324 367 1.7E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_2483 7d3b4c9e49b82dfaffb2fc7a1ccc6d5f 791 SMART SM00304 321 373 2.8E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_1050 b426644141cbadc597d5771e0ae4061a 84 Pfam PF02650 WhiA C-terminal HTH domain 41 82 2.2E-4 T 11-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal Clos_1050 b426644141cbadc597d5771e0ae4061a 84 Gene3D G3DSA:1.10.10.10 24 84 3.7E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1706 ee04a27ab423b1a18ac5ed2ce8bf8adc 142 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 7 137 2.1E-33 T 11-10-2018 Clos_1706 ee04a27ab423b1a18ac5ed2ce8bf8adc 142 PIRSF PIRSF004923 1 142 2.5E-39 T 11-10-2018 IPR026268 Protein RseC Clos_0177 137fc67b23a265a2b2b0def5d3237ce8 459 PIRSF PIRSF006603 2 456 2.8E-123 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0177 137fc67b23a265a2b2b0def5d3237ce8 459 Pfam PF01554 MatE 22 183 3.4E-33 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0177 137fc67b23a265a2b2b0def5d3237ce8 459 Pfam PF01554 MatE 249 408 4.9E-26 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0177 137fc67b23a265a2b2b0def5d3237ce8 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 421 3.7E-73 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 Gene3D G3DSA:3.30.565.10 419 554 1.3E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 SUPERFAMILY SSF55781 228 354 2.23E-10 T 11-10-2018 Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 SUPERFAMILY SSF55874 419 552 3.54E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 Pfam PF13492 GAF domain 227 351 9.3E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 Pfam PF06580 Histidine kinase 365 443 2.8E-25 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 Gene3D G3DSA:3.30.450.40 198 354 8.0E-10 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 Pfam PF07694 5TMR of 5TMR-LYT 28 194 1.6E-53 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 SMART SM00387 452 555 0.0015 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 458 553 2.0E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1336 c34da4ecb9c5c0f3a1f06d32704385fc 556 SMART SM00065 225 360 0.0023 T 11-10-2018 IPR003018 GAF domain GO:0005515 Clos_1253 f510b298a9415ce0880926ccd062e08e 246 Pfam PF11967 Recombination protein O N terminal 1 76 3.0E-26 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Clos_1253 f510b298a9415ce0880926ccd062e08e 246 Hamap MF_00201 DNA repair protein RecO [recO]. 1 246 29.417 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Clos_1253 f510b298a9415ce0880926ccd062e08e 246 Gene3D G3DSA:3.30.60.100 147 187 5.7E-21 T 11-10-2018 Clos_1253 f510b298a9415ce0880926ccd062e08e 246 SUPERFAMILY SSF50249 1 78 1.68E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_1253 f510b298a9415ce0880926ccd062e08e 246 Pfam PF02565 Recombination protein O C terminal 82 241 1.0E-37 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Clos_1253 f510b298a9415ce0880926ccd062e08e 246 Gene3D G3DSA:2.40.50.140 2 81 1.7E-17 T 11-10-2018 Clos_1253 f510b298a9415ce0880926ccd062e08e 246 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 245 7.2E-63 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Clos_1253 f510b298a9415ce0880926ccd062e08e 246 Gene3D G3DSA:1.20.1440.120 87 232 5.7E-21 T 11-10-2018 Clos_1253 f510b298a9415ce0880926ccd062e08e 246 SUPERFAMILY SSF57863 80 233 4.18E-38 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Clos_0877 682d342a3c0a49059cfc9ae330b3a079 284 SUPERFAMILY SSF55447 180 280 6.8E-19 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Clos_0877 682d342a3c0a49059cfc9ae330b3a079 284 Gene3D G3DSA:3.30.465.10 2 174 5.1E-55 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Clos_0877 682d342a3c0a49059cfc9ae330b3a079 284 SMART SM01092 180 278 5.0E-17 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Clos_0877 682d342a3c0a49059cfc9ae330b3a079 284 Gene3D G3DSA:3.30.390.50 181 281 1.8E-21 T 11-10-2018 Clos_0877 682d342a3c0a49059cfc9ae330b3a079 284 SUPERFAMILY SSF56176 3 173 4.2E-52 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Clos_0877 682d342a3c0a49059cfc9ae330b3a079 284 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 173 9.9E-51 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Clos_0877 682d342a3c0a49059cfc9ae330b3a079 284 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 181 276 1.3E-18 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Clos_2293 b73e64240e83aa3fe54b1b6ee00fef3a 241 Pfam PF14282 FlxA-like protein 22 109 2.2E-12 T 11-10-2018 IPR025577 FlxA-like protein Clos_2647 3748801cf22ab5faf4100933173f9880 93 SUPERFAMILY SSF160537 1 88 8.37E-34 T 11-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Clos_2647 3748801cf22ab5faf4100933173f9880 93 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 92 28.153 T 11-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 Clos_2647 3748801cf22ab5faf4100933173f9880 93 Pfam PF04026 SpoVG 1 82 1.1E-37 T 11-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 Clos_2647 3748801cf22ab5faf4100933173f9880 93 Gene3D G3DSA:3.30.1120.40 1 93 5.5E-38 T 11-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Clos_0083 ebc1a086aac27566542095738fc41775 311 SUPERFAMILY SSF53474 10 307 6.83E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_0083 ebc1a086aac27566542095738fc41775 311 Gene3D G3DSA:3.40.50.1820 2 310 2.5E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_0083 ebc1a086aac27566542095738fc41775 311 Pfam PF12146 Serine aminopeptidase, S33 34 294 6.8E-57 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Clos_2523 8e8f6d1cfb9fd3758520c439ef522ee2 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 35 88 2.5E-16 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Clos_2523 8e8f6d1cfb9fd3758520c439ef522ee2 97 SUPERFAMILY SSF101498 2 90 1.07E-13 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Clos_2523 8e8f6d1cfb9fd3758520c439ef522ee2 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 91 1.2E-14 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Clos_2839 d84cee96d2ba8d0d4cd4fc59891bdbb2 122 Pfam PF06305 Lipopolysaccharide assembly protein A domain 25 87 6.4E-17 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Clos_2003 bcdac8186d350e7fe0154793992ae382 299 SUPERFAMILY SSF118352 233 291 2.35E-19 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Clos_2003 bcdac8186d350e7fe0154793992ae382 299 PIRSF PIRSF005261 1 292 4.4E-71 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Clos_2003 bcdac8186d350e7fe0154793992ae382 299 Gene3D G3DSA:3.90.1280.10 238 293 2.1E-22 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Clos_2003 bcdac8186d350e7fe0154793992ae382 299 Pfam PF01430 Hsp33 protein 4 281 7.6E-82 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Clos_2003 bcdac8186d350e7fe0154793992ae382 299 Gene3D G3DSA:3.55.30.10 3 237 5.0E-77 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Clos_2003 bcdac8186d350e7fe0154793992ae382 299 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 292 35.326 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Clos_2003 bcdac8186d350e7fe0154793992ae382 299 SUPERFAMILY SSF64397 3 242 5.49E-64 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Clos_0022 aabde37eb2e5ec8901d293be74d1aeee 202 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 5 202 2.3E-68 T 11-10-2018 IPR019870 Selenium metabolism protein YedF Clos_0022 aabde37eb2e5ec8901d293be74d1aeee 202 SUPERFAMILY SSF64307 3 65 6.67E-14 T 11-10-2018 IPR036868 TusA-like domain superfamily Clos_0022 aabde37eb2e5ec8901d293be74d1aeee 202 Pfam PF02635 DsrE/DsrF-like family 128 200 6.5E-6 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Clos_0022 aabde37eb2e5ec8901d293be74d1aeee 202 Gene3D G3DSA:3.30.110.40 3 81 3.0E-22 T 11-10-2018 IPR036868 TusA-like domain superfamily Clos_0022 aabde37eb2e5ec8901d293be74d1aeee 202 Pfam PF01206 Sulfurtransferase TusA 3 65 3.0E-14 T 11-10-2018 IPR001455 TusA-like domain Clos_0022 aabde37eb2e5ec8901d293be74d1aeee 202 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 5 29 - T 11-10-2018 IPR001455 TusA-like domain Clos_0022 aabde37eb2e5ec8901d293be74d1aeee 202 Gene3D G3DSA:3.40.1260.10 85 198 1.0E-6 T 11-10-2018 IPR027396 DsrEFH-like Clos_0022 aabde37eb2e5ec8901d293be74d1aeee 202 SUPERFAMILY SSF75169 95 201 8.44E-15 T 11-10-2018 IPR027396 DsrEFH-like Clos_0325 614a59effaf7f86b4812745722f606f5 403 Gene3D G3DSA:3.30.565.10 251 403 1.7E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0325 614a59effaf7f86b4812745722f606f5 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 341 8.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0325 614a59effaf7f86b4812745722f606f5 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 380 8.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0325 614a59effaf7f86b4812745722f606f5 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 355 8.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0325 614a59effaf7f86b4812745722f606f5 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 399 8.2E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0325 614a59effaf7f86b4812745722f606f5 403 Pfam PF00512 His Kinase A (phospho-acceptor) domain 179 244 4.7E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0325 614a59effaf7f86b4812745722f606f5 403 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 401 2.2E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0325 614a59effaf7f86b4812745722f606f5 403 Gene3D G3DSA:1.10.287.130 165 244 8.5E-19 T 11-10-2018 Clos_0325 614a59effaf7f86b4812745722f606f5 403 SUPERFAMILY SSF47384 165 245 3.92E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0325 614a59effaf7f86b4812745722f606f5 403 SMART SM00388 178 245 7.5E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0325 614a59effaf7f86b4812745722f606f5 403 SUPERFAMILY SSF55874 235 400 5.37E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0325 614a59effaf7f86b4812745722f606f5 403 SMART SM00387 290 402 2.1E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_1516 2ba58c6f1bdf45552774304eba63b42e 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.151 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Clos_1516 2ba58c6f1bdf45552774304eba63b42e 185 SUPERFAMILY SSF55194 5 184 7.72E-71 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Clos_1516 2ba58c6f1bdf45552774304eba63b42e 185 Pfam PF01765 Ribosome recycling factor 20 183 5.4E-63 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Clos_1516 2ba58c6f1bdf45552774304eba63b42e 185 Gene3D G3DSA:1.10.132.20 12 182 5.7E-67 T 11-10-2018 Clos_1516 2ba58c6f1bdf45552774304eba63b42e 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 3.3E-70 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Clos_1516 2ba58c6f1bdf45552774304eba63b42e 185 Gene3D G3DSA:3.30.1360.40 31 105 5.7E-67 T 11-10-2018 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 SUPERFAMILY SSF53748 3 396 3.06E-159 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 Pfam PF00162 Phosphoglycerate kinase 7 386 1.1E-168 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 Gene3D G3DSA:3.40.50.1260 8 394 6.1E-167 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PRINTS PR00477 Phosphoglycerate kinase family signature 113 128 3.4E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 3.4E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PRINTS PR00477 Phosphoglycerate kinase family signature 349 360 3.4E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PRINTS PR00477 Phosphoglycerate kinase family signature 141 163 3.4E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PRINTS PR00477 Phosphoglycerate kinase family signature 11 27 3.4E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PRINTS PR00477 Phosphoglycerate kinase family signature 171 193 3.4E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PRINTS PR00477 Phosphoglycerate kinase family signature 372 389 3.4E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PRINTS PR00477 Phosphoglycerate kinase family signature 194 213 3.4E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 3.4E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 16 26 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 PIRSF PIRSF000724 1 397 1.2E-155 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 396 43.253 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0970 4adba7c77f75560a9b71744d02d5bc37 397 Gene3D G3DSA:3.40.50.1260 173 386 6.1E-167 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_2542 6fa75d78648db501711a52fe7df98d15 225 Pfam PF02308 MgtC family 11 139 5.5E-38 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_2542 6fa75d78648db501711a52fe7df98d15 225 Gene3D G3DSA:3.30.70.260 148 221 3.9E-5 T 11-10-2018 Clos_2542 6fa75d78648db501711a52fe7df98d15 225 PRINTS PR01837 MgtC/SapB protein signature 33 51 2.0E-45 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_2542 6fa75d78648db501711a52fe7df98d15 225 PRINTS PR01837 MgtC/SapB protein signature 93 117 2.0E-45 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_2542 6fa75d78648db501711a52fe7df98d15 225 PRINTS PR01837 MgtC/SapB protein signature 14 33 2.0E-45 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_2542 6fa75d78648db501711a52fe7df98d15 225 PRINTS PR01837 MgtC/SapB protein signature 66 88 2.0E-45 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_2542 6fa75d78648db501711a52fe7df98d15 225 SUPERFAMILY SSF55021 146 218 1.6E-5 T 11-10-2018 Clos_0463 447af8c044acf8065a25fb08c37d1000 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 1.1E-73 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Clos_0463 447af8c044acf8065a25fb08c37d1000 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Clos_0463 447af8c044acf8065a25fb08c37d1000 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 229 42.0 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Clos_0463 447af8c044acf8065a25fb08c37d1000 236 SUPERFAMILY SSF53448 7 230 2.38E-61 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0463 447af8c044acf8065a25fb08c37d1000 236 Gene3D G3DSA:3.90.550.10 2 234 1.9E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0463 447af8c044acf8065a25fb08c37d1000 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 5.5E-71 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Clos_1343 2d52231ce4c3bec7baedfe2e9fc4ebc3 303 Gene3D G3DSA:1.10.3720.10 89 303 3.1E-22 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1343 2d52231ce4c3bec7baedfe2e9fc4ebc3 303 SUPERFAMILY SSF161098 94 287 4.58E-27 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1343 2d52231ce4c3bec7baedfe2e9fc4ebc3 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 76 4.5E-15 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Clos_1343 2d52231ce4c3bec7baedfe2e9fc4ebc3 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 302 5.7E-33 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_0133 36180069d43aaadae27f4a4e73fef0a6 292 Pfam PF04055 Radical SAM superfamily 9 114 2.6E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_0133 36180069d43aaadae27f4a4e73fef0a6 292 SUPERFAMILY SSF102114 7 287 1.01E-35 T 11-10-2018 Clos_0133 36180069d43aaadae27f4a4e73fef0a6 292 Pfam PF13394 4Fe-4S single cluster domain 12 92 3.3E-5 T 11-10-2018 Clos_0133 36180069d43aaadae27f4a4e73fef0a6 292 Pfam PF13186 Iron-sulfur cluster-binding domain 219 284 1.4E-12 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain Clos_0807 c6544c35a601a1d878dc9c6881d0cd1b 361 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 353 7.2E-142 T 11-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 Clos_0807 c6544c35a601a1d878dc9c6881d0cd1b 361 PIRSF PIRSF019466 1 359 9.6E-131 T 11-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 6.2E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 6.2E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 6.2E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 6.2E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 6.2E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 6.2E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 SUPERFAMILY SSF51735 16 257 1.18E-85 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 7.0E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 7.0E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 7.0E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 256 6.2E-66 T 11-10-2018 Clos_2696 42b7a988b222a2c062c70c994eb45d7d 258 Gene3D G3DSA:3.40.50.720 15 258 9.3E-84 T 11-10-2018 Clos_2858 24d8469bf027e9c7ca63cb3b7f05ce78 197 SUPERFAMILY SSF53163 21 192 5.23E-50 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily Clos_2858 24d8469bf027e9c7ca63cb3b7f05ce78 197 Pfam PF06866 Protein of unknown function (DUF1256) 13 179 9.0E-59 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 Clos_2858 24d8469bf027e9c7ca63cb3b7f05ce78 197 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 40 181 1.5E-63 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 Clos_2203 90aafacceae8fe6ec1ff6f61c01edeb4 205 Pfam PF07670 Nucleoside recognition 43 150 4.4E-14 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_2513 f2e4270f9064ef8f7837f4ea70d69b05 248 Pfam PF02348 Cytidylyltransferase 5 209 8.8E-34 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Clos_2513 f2e4270f9064ef8f7837f4ea70d69b05 248 Gene3D G3DSA:3.90.550.10 2 216 1.5E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_2513 f2e4270f9064ef8f7837f4ea70d69b05 248 SUPERFAMILY SSF53448 1 208 2.06E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_2709 ad3a1b49330603df47225aa4a96fec69 155 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 15 141 1.0E-37 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 Clos_2709 ad3a1b49330603df47225aa4a96fec69 155 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 144 24.242 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 Clos_1935 c6065e984bb04791e6025a0910d603fa 176 SUPERFAMILY SSF55729 1 138 8.89E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1935 c6065e984bb04791e6025a0910d603fa 176 Gene3D G3DSA:3.40.630.30 1 176 2.5E-40 T 11-10-2018 Clos_1935 c6065e984bb04791e6025a0910d603fa 176 Pfam PF00583 Acetyltransferase (GNAT) family 28 132 1.0E-11 T 11-10-2018 IPR000182 GNAT domain Clos_1622 9056f1c721ce2eb4daa84ea324875b90 351 Gene3D G3DSA:3.40.50.300 162 318 1.1E-19 T 11-10-2018 Clos_1622 9056f1c721ce2eb4daa84ea324875b90 351 SMART SM00382 174 323 0.0019 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1622 9056f1c721ce2eb4daa84ea324875b90 351 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 53 333 4.7E-110 T 11-10-2018 IPR014217 Sporulation stage III, protein AA Clos_1622 9056f1c721ce2eb4daa84ea324875b90 351 SUPERFAMILY SSF52540 85 316 8.61E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0293 c92b14284b5b6aa6e8cb854b80e58b3a 141 Gene3D G3DSA:2.40.128.20 2 141 8.6E-29 T 11-10-2018 IPR012674 Calycin Clos_0293 c92b14284b5b6aa6e8cb854b80e58b3a 141 Pfam PF09148 Domain of unknown function (DUF1934) 7 138 4.9E-32 T 11-10-2018 IPR015231 Protein of unknown function DUF1934 Clos_0293 c92b14284b5b6aa6e8cb854b80e58b3a 141 SUPERFAMILY SSF50814 7 139 4.78E-25 T 11-10-2018 IPR012674 Calycin Clos_0132 4ce55c41510298f354f49d54220aca54 339 SUPERFAMILY SSF69304 23 260 1.44E-10 T 11-10-2018 Clos_0132 4ce55c41510298f354f49d54220aca54 339 Gene3D G3DSA:2.120.10.30 52 324 2.5E-10 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Clos_0132 4ce55c41510298f354f49d54220aca54 339 Pfam PF16472 Domain of unknown function (DUF5050) 175 335 5.5E-26 T 11-10-2018 IPR032485 Domain of unknown function DUF5050 Clos_0132 4ce55c41510298f354f49d54220aca54 339 Pfam PF16472 Domain of unknown function (DUF5050) 9 148 1.1E-13 T 11-10-2018 IPR032485 Domain of unknown function DUF5050 Clos_2371 ae78555f00a685aedc33fbe3a88a116c 546 SUPERFAMILY SSF56281 1 468 9.04E-137 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_2371 ae78555f00a685aedc33fbe3a88a116c 546 SMART SM00849 13 241 3.4E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_2371 ae78555f00a685aedc33fbe3a88a116c 546 Pfam PF16661 Metallo-beta-lactamase superfamily domain 20 174 8.5E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_2371 ae78555f00a685aedc33fbe3a88a116c 546 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 396 459 5.3E-16 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Clos_2371 ae78555f00a685aedc33fbe3a88a116c 546 Pfam PF10996 Beta-Casp domain 253 381 1.5E-31 T 11-10-2018 IPR022712 Beta-Casp domain Clos_2371 ae78555f00a685aedc33fbe3a88a116c 546 Gene3D G3DSA:3.40.50.10890 221 408 5.3E-155 T 11-10-2018 Clos_2371 ae78555f00a685aedc33fbe3a88a116c 546 Gene3D G3DSA:3.60.15.10 6 443 5.3E-155 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_2371 ae78555f00a685aedc33fbe3a88a116c 546 SMART SM01027 253 382 3.7E-61 T 11-10-2018 IPR022712 Beta-Casp domain Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 SMART SM00382 343 515 5.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 SMART SM00382 28 325 3.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 SUPERFAMILY SSF52540 313 527 1.51E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 Pfam PF00005 ABC transporter 335 469 9.5E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 Gene3D G3DSA:1.10.287.380 554 632 1.9E-10 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 Pfam PF16326 ABC transporter C-terminal domain 563 627 1.8E-12 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 Gene3D G3DSA:3.40.50.300 1 281 4.3E-69 T 11-10-2018 Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 SUPERFAMILY SSF52540 4 241 3.14E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 Pfam PF12848 ABC transporter 226 296 2.1E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 Gene3D G3DSA:3.40.50.300 282 550 1.3E-63 T 11-10-2018 Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 Pfam PF00005 ABC transporter 20 187 2.7E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2066 44f6882e2b6316c3909d9b2ed314f58a 641 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0374 2a9128741fc412be97b7de6410328336 444 Gene3D G3DSA:3.20.20.140 56 353 3.5E-148 T 11-10-2018 Clos_0374 2a9128741fc412be97b7de6410328336 444 Gene3D G3DSA:2.30.40.10 10 429 3.5E-148 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0374 2a9128741fc412be97b7de6410328336 444 Pfam PF01979 Amidohydrolase family 52 411 6.2E-78 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Clos_0374 2a9128741fc412be97b7de6410328336 444 SUPERFAMILY SSF51338 1 435 9.57E-34 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0374 2a9128741fc412be97b7de6410328336 444 SUPERFAMILY SSF51556 55 361 3.89E-100 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_0374 2a9128741fc412be97b7de6410328336 444 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 2 437 40.945 T 11-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 Clos_0724 3f70d9f598b9fa049b9696b639a253bd 246 SMART SM00382 29 216 1.3E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0724 3f70d9f598b9fa049b9696b639a253bd 246 Gene3D G3DSA:3.40.50.300 1 246 4.3E-77 T 11-10-2018 Clos_0724 3f70d9f598b9fa049b9696b639a253bd 246 PIRSF PIRSF039085 1 244 2.7E-114 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Clos_0724 3f70d9f598b9fa049b9696b639a253bd 246 Pfam PF00005 ABC transporter 20 168 3.6E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0724 3f70d9f598b9fa049b9696b639a253bd 246 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0724 3f70d9f598b9fa049b9696b639a253bd 246 SUPERFAMILY SSF52540 4 238 4.72E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2146 41c7ceb4dab6511f694976d9ee696089 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 69 16.996 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Clos_2146 41c7ceb4dab6511f694976d9ee696089 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 46 3.4E-16 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Clos_2146 41c7ceb4dab6511f694976d9ee696089 71 Pfam PF02416 mttA/Hcf106 family 5 55 2.6E-16 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Clos_2086 539162b084ff7d01416ff2a71936ce47 187 Pfam PF01814 Hemerythrin HHE cation binding domain 4 138 8.2E-15 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Clos_2086 539162b084ff7d01416ff2a71936ce47 187 Gene3D G3DSA:1.20.120.520 2 184 4.4E-27 T 11-10-2018 Clos_1394 47a9e22a79916d6c72f9a7cd06e0b978 241 Pfam PF07758 Protein of unknown function (DUF1614) 47 188 4.5E-13 T 11-10-2018 IPR011672 Protein of unknown function DUF1614 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Gene3D G3DSA:3.30.54.20 132 188 3.5E-64 T 11-10-2018 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Gene3D G3DSA:3.30.930.10 224 531 3.6E-130 T 11-10-2018 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Gene3D G3DSA:3.40.50.800 532 636 2.9E-36 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Pfam PF02824 TGS domain 4 62 5.8E-11 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 634 35.596 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.4E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 6.4E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 6.4E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.4E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 6.4E-52 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 SUPERFAMILY SSF52954 529 634 4.38E-35 T 11-10-2018 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Gene3D G3DSA:3.30.980.10 71 222 3.5E-64 T 11-10-2018 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 SMART SM00863 171 220 5.3E-25 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 SUPERFAMILY SSF55186 66 242 9.16E-65 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 631 1.9E-228 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Pfam PF03129 Anticodon binding domain 541 628 6.6E-25 T 11-10-2018 IPR004154 Anticodon-binding Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Gene3D G3DSA:3.10.20.30 1 63 1.2E-18 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 SUPERFAMILY SSF81271 4 63 7.41E-13 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 324 529 1.5E-37 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 SUPERFAMILY SSF55681 244 526 1.7E-95 T 11-10-2018 Clos_1980 09c89b9a6d572536eded6c2e33eb5837 636 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 220 2.2E-16 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Clos_2045 d726ac3d7b057957ac91fd3835f516e1 159 Gene3D G3DSA:3.90.79.10 1 143 1.2E-21 T 11-10-2018 Clos_2045 d726ac3d7b057957ac91fd3835f516e1 159 Pfam PF00293 NUDIX domain 7 128 1.0E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_2045 d726ac3d7b057957ac91fd3835f516e1 159 SUPERFAMILY SSF55811 7 152 2.17E-17 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_1309 2db665e9ae434df5fe68b6a12c339cba 120 Gene3D G3DSA:3.30.1380.10 9 119 2.9E-29 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Clos_1309 2db665e9ae434df5fe68b6a12c339cba 120 Pfam PF08291 Peptidase M15 8 108 1.1E-26 T 11-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 Clos_1309 2db665e9ae434df5fe68b6a12c339cba 120 SUPERFAMILY SSF55166 9 113 2.67E-34 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Clos_1641 8694f44b48338ee5e18498c1ed1cecdf 88 PRINTS PR00046 Major sigma-70 factor signature 54 69 3.2E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1641 8694f44b48338ee5e18498c1ed1cecdf 88 PRINTS PR00046 Major sigma-70 factor signature 33 45 3.2E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1641 8694f44b48338ee5e18498c1ed1cecdf 88 PRINTS PR00046 Major sigma-70 factor signature 69 80 3.2E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_1641 8694f44b48338ee5e18498c1ed1cecdf 88 SUPERFAMILY SSF88659 7 86 1.83E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1641 8694f44b48338ee5e18498c1ed1cecdf 88 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 84 2.9E-14 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1641 8694f44b48338ee5e18498c1ed1cecdf 88 Gene3D G3DSA:1.20.140.160 2 86 7.8E-16 T 11-10-2018 Clos_1641 8694f44b48338ee5e18498c1ed1cecdf 88 Pfam PF04545 Sigma-70, region 4 32 81 1.3E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Clos_1641 8694f44b48338ee5e18498c1ed1cecdf 88 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 54 80 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 Gene3D G3DSA:3.30.70.20 213 314 5.3E-5 T 11-10-2018 Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 SUPERFAMILY SSF46548 241 329 1.31E-10 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 SUPERFAMILY SSF142984 162 226 1.57E-7 T 11-10-2018 Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 7 151 1.1E-46 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 Pfam PF10531 SLBB domain 164 209 4.0E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 Pfam PF13375 RnfC Barrel sandwich hybrid domain 377 432 8.9E-13 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 Gene3D G3DSA:3.40.50.11540 12 161 4.8E-16 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 SUPERFAMILY SSF142019 2 169 2.75E-46 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 254 265 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 PIRSF PIRSF036408 1 442 7.2E-191 T 11-10-2018 IPR017054 Propanediol utilization protein, PduS, predicted Clos_2391 3f50e8abdd4931066ae4cafae08fae96 442 Pfam PF13534 4Fe-4S dicluster domain 253 313 2.2E-10 T 11-10-2018 Clos_2013 6ccff0e2d9ed67856210d2799fb4fb5a 235 PIRSF PIRSF016933 2 229 1.6E-72 T 11-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 Clos_2013 6ccff0e2d9ed67856210d2799fb4fb5a 235 Pfam PF13367 Protease prsW family 29 206 1.0E-43 T 11-10-2018 IPR026898 Protease PrsW GO:0008233 Clos_2282 fd9e31178c8541e0bde91448cd074223 354 SMART SM00382 23 212 5.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2282 fd9e31178c8541e0bde91448cd074223 354 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2282 fd9e31178c8541e0bde91448cd074223 354 Gene3D G3DSA:3.40.50.300 2 233 2.6E-56 T 11-10-2018 Clos_2282 fd9e31178c8541e0bde91448cd074223 354 SUPERFAMILY SSF52540 6 240 2.94E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2282 fd9e31178c8541e0bde91448cd074223 354 Pfam PF00005 ABC transporter 23 160 3.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2396 7363458cac7d9b7baa23b3de0fcd34b6 117 SMART SM00877 45 117 5.1E-20 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2396 7363458cac7d9b7baa23b3de0fcd34b6 117 SUPERFAMILY SSF143414 45 109 7.32E-16 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_2396 7363458cac7d9b7baa23b3de0fcd34b6 117 Pfam PF00936 BMC domain 46 108 1.4E-15 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2396 7363458cac7d9b7baa23b3de0fcd34b6 117 PIRSF PIRSF012296 3 117 2.4E-52 T 11-10-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 Clos_2396 7363458cac7d9b7baa23b3de0fcd34b6 117 Gene3D G3DSA:3.30.70.1710 3 117 3.3E-46 T 11-10-2018 Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.9E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.9E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.9E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.9E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.9E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 0.0063 T 11-10-2018 Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 1.0E-73 T 11-10-2018 Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.0E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.0E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.0E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 Gene3D G3DSA:3.40.50.720 1 245 4.0E-88 T 11-10-2018 Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 SUPERFAMILY SSF51735 4 245 1.68E-91 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0089 cfc1e31ee3dc1ba960f52e0549c545b3 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 6.6E-90 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Clos_2065 c0dc1c8e86e7e0f276e4bd988a31aa55 519 PIRSF PIRSF038958 1 516 5.7E-140 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Clos_2065 c0dc1c8e86e7e0f276e4bd988a31aa55 519 Pfam PF01943 Polysaccharide biosynthesis protein 6 312 5.6E-38 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Clos_2065 c0dc1c8e86e7e0f276e4bd988a31aa55 519 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 365 507 7.4E-31 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Clos_1745 c3ba9ca568f06eb4e0a29a901f25a713 121 Gene3D G3DSA:3.30.460.10 1 110 3.2E-37 T 11-10-2018 Clos_1745 c3ba9ca568f06eb4e0a29a901f25a713 121 SUPERFAMILY SSF81301 5 116 2.13E-38 T 11-10-2018 Clos_1745 c3ba9ca568f06eb4e0a29a901f25a713 121 Pfam PF02410 Ribosomal silencing factor during starvation 11 106 1.2E-25 T 11-10-2018 Clos_1745 c3ba9ca568f06eb4e0a29a901f25a713 121 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 106 8.4E-36 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Clos_1745 c3ba9ca568f06eb4e0a29a901f25a713 121 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 107 23.667 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Clos_0363 e6ef7a5f90ef4a2ed3f5d64b0c644007 200 SUPERFAMILY SSF52499 2 184 4.71E-52 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Clos_0363 e6ef7a5f90ef4a2ed3f5d64b0c644007 200 Gene3D G3DSA:3.40.50.850 1 184 3.9E-76 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Clos_0363 e6ef7a5f90ef4a2ed3f5d64b0c644007 200 Pfam PF00857 Isochorismatase family 5 176 1.0E-44 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 Clos_0243 fb40f7143f14792f71483aa797842a4d 161 Gene3D G3DSA:1.10.4010.10 1 161 4.2E-14 T 11-10-2018 Clos_0243 fb40f7143f14792f71483aa797842a4d 161 PIRSF PIRSF030140 1 161 7.4E-55 T 11-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 Clos_0243 fb40f7143f14792f71483aa797842a4d 161 Pfam PF08761 dUTPase 2 161 1.7E-46 T 11-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 Clos_0243 fb40f7143f14792f71483aa797842a4d 161 SUPERFAMILY SSF101386 2 161 6.17E-45 T 11-10-2018 Clos_1797 6e2024ea0bc33a9b7d1754f1211226ce 185 Gene3D G3DSA:1.10.340.30 1 185 5.9E-85 T 11-10-2018 Clos_1797 6e2024ea0bc33a9b7d1754f1211226ce 185 SUPERFAMILY SSF48150 1 184 9.42E-81 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Clos_1797 6e2024ea0bc33a9b7d1754f1211226ce 185 Pfam PF03352 Methyladenine glycosylase 6 181 1.6E-83 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 Clos_1524 e5c113491659d2bb0eb43a0103543cb3 154 SUPERFAMILY SSF74942 86 154 1.7E-15 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Clos_1524 e5c113491659d2bb0eb43a0103543cb3 154 Pfam PF02576 RimP N-terminal domain 13 85 6.3E-31 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Clos_1524 e5c113491659d2bb0eb43a0103543cb3 154 SUPERFAMILY SSF75420 6 85 7.45E-27 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily Clos_1524 e5c113491659d2bb0eb43a0103543cb3 154 Gene3D G3DSA:2.30.30.180 89 152 2.6E-8 T 11-10-2018 Clos_1524 e5c113491659d2bb0eb43a0103543cb3 154 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 8 154 24.261 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Clos_1524 e5c113491659d2bb0eb43a0103543cb3 154 Gene3D G3DSA:3.30.300.70 2 82 1.7E-32 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily Clos_1524 e5c113491659d2bb0eb43a0103543cb3 154 Pfam PF17384 RimP C-terminal SH3 domain 88 154 7.1E-12 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Clos_2252 8b6746f54a7e7b16badcecaa3b01dbe0 157 Gene3D G3DSA:1.10.10.1590 4 74 8.4E-14 T 11-10-2018 Clos_2252 8b6746f54a7e7b16badcecaa3b01dbe0 157 PIRSF PIRSF000216 3 157 4.0E-53 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_2252 8b6746f54a7e7b16badcecaa3b01dbe0 157 SUPERFAMILY SSF52833 6 157 7.6E-50 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_2252 8b6746f54a7e7b16badcecaa3b01dbe0 157 Gene3D G3DSA:3.40.30.10 75 157 8.3E-29 T 11-10-2018 Clos_2252 8b6746f54a7e7b16badcecaa3b01dbe0 157 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 16 157 1.8E-48 T 11-10-2018 Clos_2492 6081792a6818ed0bef33ec82c25dcc34 284 SUPERFAMILY SSF56752 18 264 1.83E-51 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Clos_2492 6081792a6818ed0bef33ec82c25dcc34 284 ProSitePatterns PS00770 Aminotransferases class-IV signature. 177 205 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Clos_2492 6081792a6818ed0bef33ec82c25dcc34 284 Gene3D G3DSA:3.20.10.10 118 282 8.0E-34 T 11-10-2018 Clos_2492 6081792a6818ed0bef33ec82c25dcc34 284 Gene3D G3DSA:3.30.470.10 3 115 1.8E-16 T 11-10-2018 Clos_2492 6081792a6818ed0bef33ec82c25dcc34 284 Pfam PF01063 Amino-transferase class IV 39 250 1.4E-50 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Clos_1475 6d31924924a528fdf988f6c6557d53b8 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 133.51 T 11-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Clos_1475 6d31924924a528fdf988f6c6557d53b8 259 PIRSF PIRSF011572 2 258 5.6E-114 T 11-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Clos_1475 6d31924924a528fdf988f6c6557d53b8 259 Pfam PF06018 CodY GAF-like domain 4 179 4.0E-63 T 11-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 Clos_1475 6d31924924a528fdf988f6c6557d53b8 259 SUPERFAMILY SSF46785 168 257 1.2E-41 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1475 6d31924924a528fdf988f6c6557d53b8 259 Pfam PF08222 CodY helix-turn-helix domain 198 258 6.4E-35 T 11-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal Clos_1475 6d31924924a528fdf988f6c6557d53b8 259 Gene3D G3DSA:1.10.10.10 161 259 1.3E-45 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1475 6d31924924a528fdf988f6c6557d53b8 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 5 254 4.0E-111 T 11-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Clos_1475 6d31924924a528fdf988f6c6557d53b8 259 Gene3D G3DSA:3.30.450.40 1 160 1.2E-55 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 Gene3D G3DSA:3.40.50.300 127 312 2.2E-62 T 11-10-2018 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 SUPERFAMILY SSF52172 1 187 2.56E-42 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 Pfam PF00158 Sigma-54 interaction domain 144 308 6.3E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 Pfam PF02954 Bacterial regulatory protein, Fis family 414 451 2.9E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 Gene3D G3DSA:1.10.8.60 313 379 9.5E-24 T 11-10-2018 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 SUPERFAMILY SSF52540 146 382 1.36E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 SMART SM00382 162 305 2.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 SMART SM00448 4 115 8.0E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 Gene3D G3DSA:3.40.50.2300 5 122 2.9E-34 T 11-10-2018 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 Gene3D G3DSA:1.10.10.60 402 454 7.5E-8 T 11-10-2018 Clos_0749 acc4f96313938b8f58551bf4e1b76e60 455 SUPERFAMILY SSF46689 356 452 5.82E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0971 1d1cd6b24643e980eab2b78830ce5ede 248 Pfam PF00121 Triosephosphate isomerase 5 246 6.7E-100 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0971 1d1cd6b24643e980eab2b78830ce5ede 248 Gene3D G3DSA:3.20.20.70 1 248 1.0E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0971 1d1cd6b24643e980eab2b78830ce5ede 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 61.753 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0971 1d1cd6b24643e980eab2b78830ce5ede 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0971 1d1cd6b24643e980eab2b78830ce5ede 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 4.1E-65 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0971 1d1cd6b24643e980eab2b78830ce5ede 248 SUPERFAMILY SSF51351 2 247 2.49E-98 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_1236 ab828baad9b9dcd9908343d956f8c308 256 Gene3D G3DSA:2.40.240.20 1 72 7.1E-22 T 11-10-2018 Clos_1236 ab828baad9b9dcd9908343d956f8c308 256 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 6 253 1.9E-62 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Clos_1236 ab828baad9b9dcd9908343d956f8c308 256 SUPERFAMILY SSF75217 75 253 1.18E-48 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Clos_1236 ab828baad9b9dcd9908343d956f8c308 256 SUPERFAMILY SSF88697 3 68 1.47E-12 T 11-10-2018 IPR015947 PUA-like superfamily Clos_1236 ab828baad9b9dcd9908343d956f8c308 256 PIRSF PIRSF015601 1 253 8.2E-68 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Clos_1236 ab828baad9b9dcd9908343d956f8c308 256 Pfam PF04452 RNA methyltransferase 19 248 2.6E-71 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Clos_1236 ab828baad9b9dcd9908343d956f8c308 256 Gene3D G3DSA:3.40.1280.10 74 255 1.9E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clos_2530 180d641eec42adf8689a13dfdd070439 190 SUPERFAMILY SSF88659 99 188 4.86E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_2530 180d641eec42adf8689a13dfdd070439 190 Gene3D G3DSA:1.10.10.10 117 190 1.1E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2530 180d641eec42adf8689a13dfdd070439 190 Pfam PF08281 Sigma-70, region 4 131 170 3.0E-6 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_2530 180d641eec42adf8689a13dfdd070439 190 Pfam PF04542 Sigma-70 region 2 23 91 3.5E-9 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2530 180d641eec42adf8689a13dfdd070439 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 186 6.1E-18 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_2530 180d641eec42adf8689a13dfdd070439 190 SUPERFAMILY SSF88946 5 105 5.89E-14 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2530 180d641eec42adf8689a13dfdd070439 190 Gene3D G3DSA:1.10.10.10 33 116 1.3E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1433 733feb76048984f10d7d493d51f6d373 250 Gene3D G3DSA:3.60.40.10 1 244 6.2E-77 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_1433 733feb76048984f10d7d493d51f6d373 250 SMART SM00331 8 242 4.4E-36 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_1433 733feb76048984f10d7d493d51f6d373 250 SUPERFAMILY SSF81606 2 241 7.46E-71 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_1433 733feb76048984f10d7d493d51f6d373 250 SMART SM00332 2 240 9.7E-34 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_1433 733feb76048984f10d7d493d51f6d373 250 Pfam PF00481 Protein phosphatase 2C 30 235 1.2E-18 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2105 ceacaf2d53766388569ccb172f65101a 241 Gene3D G3DSA:3.40.50.1000 7 209 5.2E-35 T 11-10-2018 IPR023214 HAD superfamily Clos_2105 ceacaf2d53766388569ccb172f65101a 241 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 193 2.6E-19 T 11-10-2018 Clos_2105 ceacaf2d53766388569ccb172f65101a 241 Gene3D G3DSA:1.20.1440.100 17 93 5.2E-35 T 11-10-2018 Clos_2105 ceacaf2d53766388569ccb172f65101a 241 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 195 1.6E-30 T 11-10-2018 Clos_2105 ceacaf2d53766388569ccb172f65101a 241 SUPERFAMILY SSF56784 1 232 3.66E-31 T 11-10-2018 IPR036412 HAD-like superfamily Clos_2105 ceacaf2d53766388569ccb172f65101a 241 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 206 3.2E-49 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Clos_2439 4d083c344c8ab20990d66e032ff82672 254 Gene3D G3DSA:3.20.20.80 1 194 1.9E-69 T 11-10-2018 Clos_2439 4d083c344c8ab20990d66e032ff82672 254 Pfam PF01183 Glycosyl hydrolases family 25 3 174 2.5E-16 T 11-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 Clos_2439 4d083c344c8ab20990d66e032ff82672 254 SUPERFAMILY SSF51445 3 189 1.16E-37 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Clos_0631 ae4825c350fa4549986a0a58c6b729a9 496 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 435 5.8E-8 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Clos_2497 8565a5d4550bdab1fbe38313c0a51582 467 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 4 454 8.9E-140 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 Clos_2497 8565a5d4550bdab1fbe38313c0a51582 467 Pfam PF03553 Na+/H+ antiporter family 158 450 9.1E-57 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Clos_1495 b2e228b8faa1286859b71c4dd66829b8 120 SUPERFAMILY SSF52172 5 120 7.83E-39 T 11-10-2018 IPR011006 CheY-like superfamily Clos_1495 b2e228b8faa1286859b71c4dd66829b8 120 SMART SM00448 3 115 1.8E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1495 b2e228b8faa1286859b71c4dd66829b8 120 Gene3D G3DSA:3.40.50.2300 4 120 9.4E-39 T 11-10-2018 Clos_1495 b2e228b8faa1286859b71c4dd66829b8 120 Pfam PF00072 Response regulator receiver domain 5 116 4.1E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2600 0cb2d4194a21a0d7e9b2d03ad3ce64c7 455 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2600 0cb2d4194a21a0d7e9b2d03ad3ce64c7 455 SUPERFAMILY SSF161070 10 451 3.53E-145 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Clos_2600 0cb2d4194a21a0d7e9b2d03ad3ce64c7 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 2.4E-14 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2600 0cb2d4194a21a0d7e9b2d03ad3ce64c7 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 389 409 2.4E-14 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2600 0cb2d4194a21a0d7e9b2d03ad3ce64c7 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 2.4E-14 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2600 0cb2d4194a21a0d7e9b2d03ad3ce64c7 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 2.4E-14 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2600 0cb2d4194a21a0d7e9b2d03ad3ce64c7 455 Pfam PF00209 Sodium:neurotransmitter symporter family 10 125 4.9E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_2600 0cb2d4194a21a0d7e9b2d03ad3ce64c7 455 Pfam PF00209 Sodium:neurotransmitter symporter family 155 451 2.0E-40 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Clos_0454 8e3fd6a28ba049589e5190db7409aa2e 168 Pfam PF02151 UvrB/uvrC motif 128 161 6.1E-6 T 11-10-2018 IPR001943 UVR domain GO:0005515 Clos_0454 8e3fd6a28ba049589e5190db7409aa2e 168 PIRSF PIRSF015034 1 167 8.8E-59 T 11-10-2018 IPR025542 YacH protein Clos_0454 8e3fd6a28ba049589e5190db7409aa2e 168 SUPERFAMILY SSF46600 129 162 3.4E-5 T 11-10-2018 IPR036876 UVR domain superfamily Clos_0639 6a4dbed71bfee67a84bda10390581151 357 Pfam PF13181 Tetratricopeptide repeat 263 294 0.12 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_0639 6a4dbed71bfee67a84bda10390581151 357 Gene3D G3DSA:3.90.550.10 1 232 4.2E-23 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0639 6a4dbed71bfee67a84bda10390581151 357 SUPERFAMILY SSF53448 1 148 1.22E-23 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0639 6a4dbed71bfee67a84bda10390581151 357 Gene3D G3DSA:1.25.40.10 262 357 9.7E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_0639 6a4dbed71bfee67a84bda10390581151 357 SUPERFAMILY SSF81901 183 350 1.49E-13 T 11-10-2018 Clos_0639 6a4dbed71bfee67a84bda10390581151 357 Pfam PF00535 Glycosyl transferase family 2 4 145 8.3E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Clos_2699 5fc9c7bd2debe0e9820a2f4f2a55ae9d 645 PIRSF PIRSF005814 516 637 0.29 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Clos_2699 5fc9c7bd2debe0e9820a2f4f2a55ae9d 645 PIRSF PIRSF005814 1 557 3.9E-191 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Clos_2699 5fc9c7bd2debe0e9820a2f4f2a55ae9d 645 SMART SM00533 9 311 3.5E-5 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Clos_2699 5fc9c7bd2debe0e9820a2f4f2a55ae9d 645 SUPERFAMILY SSF52540 292 510 2.96E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2699 5fc9c7bd2debe0e9820a2f4f2a55ae9d 645 Gene3D G3DSA:3.40.50.300 289 563 1.3E-72 T 11-10-2018 Clos_2699 5fc9c7bd2debe0e9820a2f4f2a55ae9d 645 Pfam PF00488 MutS domain V 326 506 5.7E-34 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_2699 5fc9c7bd2debe0e9820a2f4f2a55ae9d 645 SUPERFAMILY SSF48334 74 285 7.85E-17 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Clos_2699 5fc9c7bd2debe0e9820a2f4f2a55ae9d 645 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 405 421 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_2699 5fc9c7bd2debe0e9820a2f4f2a55ae9d 645 SMART SM00534 323 508 1.6E-66 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Clos_1104 44ad946292c95c6970faf2afc6ffff2b 163 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 156 5.5E-42 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Clos_1104 44ad946292c95c6970faf2afc6ffff2b 163 Gene3D G3DSA:3.40.50.300 2 160 9.3E-52 T 11-10-2018 Clos_1104 44ad946292c95c6970faf2afc6ffff2b 163 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 134 7.0E-45 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Clos_1104 44ad946292c95c6970faf2afc6ffff2b 163 SUPERFAMILY SSF52540 2 159 5.95E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1779 3082e639398c0792e7ba4c3a2277e233 250 TIGRFAM TIGR00552 nadE: NAD+ synthetase 5 245 2.5E-74 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Clos_1779 3082e639398c0792e7ba4c3a2277e233 250 Gene3D G3DSA:3.40.50.620 1 248 1.1E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_1779 3082e639398c0792e7ba4c3a2277e233 250 Pfam PF02540 NAD synthase 9 244 1.8E-70 T 11-10-2018 IPR022310 NAD/GMP synthase Clos_1779 3082e639398c0792e7ba4c3a2277e233 250 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 4 247 52.223 T 11-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 Clos_1779 3082e639398c0792e7ba4c3a2277e233 250 SUPERFAMILY SSF52402 3 246 2.56E-73 T 11-10-2018 Clos_0810 df83caa4f413ede744baea62f6b7b587 191 Pfam PF12952 Domain of unknown function (DUF3841) 9 190 4.8E-60 T 11-10-2018 IPR024211 Protein of unknown function DUF3841 Clos_2509 95c114cdaaeee39186e334a6bc137af4 324 Gene3D G3DSA:3.40.50.11190 2 145 5.9E-18 T 11-10-2018 Clos_2509 95c114cdaaeee39186e334a6bc137af4 324 Gene3D G3DSA:3.40.50.2000 146 282 2.4E-23 T 11-10-2018 Clos_2852 f1c75848830a3d467bb793af93ec0675 159 Gene3D G3DSA:3.90.79.10 2 145 7.8E-26 T 11-10-2018 Clos_2852 f1c75848830a3d467bb793af93ec0675 159 SUPERFAMILY SSF55811 3 132 1.03E-21 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_2852 f1c75848830a3d467bb793af93ec0675 159 Pfam PF00293 NUDIX domain 6 125 3.3E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_0446 7dad3edec123ae1a684f89c559f8f145 265 Gene3D G3DSA:3.30.420.40 89 264 2.0E-60 T 11-10-2018 Clos_0446 7dad3edec123ae1a684f89c559f8f145 265 SUPERFAMILY SSF53067 123 254 1.66E-37 T 11-10-2018 Clos_0446 7dad3edec123ae1a684f89c559f8f145 265 Pfam PF03309 Type III pantothenate kinase 2 205 1.2E-75 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Clos_0446 7dad3edec123ae1a684f89c559f8f145 265 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 36.879 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Clos_0446 7dad3edec123ae1a684f89c559f8f145 265 SUPERFAMILY SSF53067 1 122 2.25E-37 T 11-10-2018 Clos_0446 7dad3edec123ae1a684f89c559f8f145 265 Gene3D G3DSA:3.30.420.40 1 88 1.4E-32 T 11-10-2018 Clos_0446 7dad3edec123ae1a684f89c559f8f145 265 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 251 2.7E-76 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Clos_0686 3792ac456ee6b6daaae05770822dff10 303 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 128 4.3E-18 T 11-10-2018 IPR000014 PAS domain Clos_0686 3792ac456ee6b6daaae05770822dff10 303 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 285 1.6E-40 T 11-10-2018 IPR000160 GGDEF domain Clos_0686 3792ac456ee6b6daaae05770822dff10 303 SUPERFAMILY SSF55785 15 122 3.84E-19 T 11-10-2018 IPR035965 PAS domain superfamily Clos_0686 3792ac456ee6b6daaae05770822dff10 303 SMART SM00267 122 292 5.1E-52 T 11-10-2018 IPR000160 GGDEF domain Clos_0686 3792ac456ee6b6daaae05770822dff10 303 Gene3D G3DSA:3.30.450.20 5 119 2.9E-23 T 11-10-2018 Clos_0686 3792ac456ee6b6daaae05770822dff10 303 Pfam PF13426 PAS domain 25 121 3.3E-9 T 11-10-2018 IPR000014 PAS domain Clos_0686 3792ac456ee6b6daaae05770822dff10 303 Pfam PF00990 Diguanylate cyclase, GGDEF domain 133 285 2.5E-45 T 11-10-2018 IPR000160 GGDEF domain Clos_0686 3792ac456ee6b6daaae05770822dff10 303 Gene3D G3DSA:3.30.70.270 131 301 3.5E-47 T 11-10-2018 Clos_0686 3792ac456ee6b6daaae05770822dff10 303 SMART SM00091 12 77 2.8E-4 T 11-10-2018 IPR000014 PAS domain Clos_0686 3792ac456ee6b6daaae05770822dff10 303 SUPERFAMILY SSF55073 138 285 6.28E-42 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_1124 e78d8af331830d3aa7ea70620f7fee67 77 PIRSF PIRSF037031 1 77 2.1E-29 T 11-10-2018 IPR005243 Redox-active disulphide protein 2 Clos_1124 e78d8af331830d3aa7ea70620f7fee67 77 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 76 3.3E-22 T 11-10-2018 IPR005243 Redox-active disulphide protein 2 Clos_1124 e78d8af331830d3aa7ea70620f7fee67 77 SUPERFAMILY SSF52833 1 75 1.77E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_1124 e78d8af331830d3aa7ea70620f7fee67 77 Gene3D G3DSA:3.40.30.10 1 75 3.5E-28 T 11-10-2018 Clos_1124 e78d8af331830d3aa7ea70620f7fee67 77 Pfam PF13192 Thioredoxin domain 1 75 2.1E-26 T 11-10-2018 IPR012336 Thioredoxin-like fold Clos_0787 d4c2fac23ce787d4bbc3fea9bfd710b5 226 SUPERFAMILY SSF52172 2 175 1.51E-36 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0787 d4c2fac23ce787d4bbc3fea9bfd710b5 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 219 8.2E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0787 d4c2fac23ce787d4bbc3fea9bfd710b5 226 Gene3D G3DSA:3.40.50.2300 1 118 1.3E-35 T 11-10-2018 Clos_0787 d4c2fac23ce787d4bbc3fea9bfd710b5 226 Gene3D G3DSA:1.10.10.10 119 224 5.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0787 d4c2fac23ce787d4bbc3fea9bfd710b5 226 Pfam PF00072 Response regulator receiver domain 4 112 5.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0787 d4c2fac23ce787d4bbc3fea9bfd710b5 226 SMART SM00448 1 112 7.8E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0787 d4c2fac23ce787d4bbc3fea9bfd710b5 226 SMART SM00862 145 220 7.9E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_1661 a5b2fc252de44f7aa650a5aa9c5f1c61 144 Gene3D G3DSA:1.10.10.10 1 88 3.5E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1661 a5b2fc252de44f7aa650a5aa9c5f1c61 144 SUPERFAMILY SSF46785 7 141 1.07E-39 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1661 a5b2fc252de44f7aa650a5aa9c5f1c61 144 Gene3D G3DSA:3.30.1490.190 91 144 1.4E-18 T 11-10-2018 Clos_1661 a5b2fc252de44f7aa650a5aa9c5f1c61 144 Pfam PF01475 Ferric uptake regulator family 15 137 9.5E-37 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SUPERFAMILY SSF48452 847 1052 3.6E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SUPERFAMILY SSF55781 1664 1815 6.13E-8 T 11-10-2018 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Gene3D G3DSA:3.30.450.40 1659 1815 5.1E-8 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Gene3D G3DSA:1.25.40.10 671 860 4.9E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Gene3D G3DSA:3.40.50.300 283 475 1.2E-6 T 11-10-2018 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SUPERFAMILY SSF56112 4 255 4.45E-20 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1475 1635 1.1E-52 T 11-10-2018 IPR000160 GGDEF domain Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Gene3D G3DSA:3.30.200.20 3 99 4.9E-19 T 11-10-2018 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Pfam PF13191 AAA ATPase domain 284 451 1.6E-9 T 11-10-2018 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Gene3D G3DSA:1.10.510.10 100 257 4.9E-19 T 11-10-2018 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SUPERFAMILY SSF52540 282 544 1.14E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SMART SM00267 1467 1637 9.6E-56 T 11-10-2018 IPR000160 GGDEF domain Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SUPERFAMILY SSF55073 1483 1639 2.9E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Gene3D G3DSA:3.30.70.270 1476 1640 5.5E-53 T 11-10-2018 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Gene3D G3DSA:1.25.40.10 861 1129 2.6E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Pfam PF13424 Tetratricopeptide repeat 865 932 3.6E-7 T 11-10-2018 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SUPERFAMILY SSF48452 696 847 1.63E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Pfam PF00069 Protein kinase domain 90 240 1.0E-8 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SMART SM00220 8 259 0.0013 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1479 1633 4.6E-45 T 11-10-2018 IPR000160 GGDEF domain Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SMART SM00028 859 892 60.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SMART SM00028 981 1014 5.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SMART SM00028 1180 1213 440.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SMART SM00028 899 933 46.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SMART SM00028 779 812 42.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 SMART SM00028 739 772 340.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_1186 69b3221c0ca6e505d16628f3e464738e 1822 Gene3D G3DSA:3.30.450.40 1344 1475 2.1E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily Clos_0520 d7c8268224faea4f1e564da624832576 207 SMART SM00363 98 160 7.5E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0520 d7c8268224faea4f1e564da624832576 207 Gene3D G3DSA:3.10.290.10 97 192 1.6E-87 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_0520 d7c8268224faea4f1e564da624832576 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.714 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Clos_0520 d7c8268224faea4f1e564da624832576 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 6.1E-75 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Clos_0520 d7c8268224faea4f1e564da624832576 207 Pfam PF01479 S4 domain 99 145 1.5E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0520 d7c8268224faea4f1e564da624832576 207 SUPERFAMILY SSF55174 2 207 3.93E-70 T 11-10-2018 Clos_0520 d7c8268224faea4f1e564da624832576 207 Gene3D G3DSA:1.10.1050.10 6 207 1.6E-87 T 11-10-2018 Clos_0520 d7c8268224faea4f1e564da624832576 207 SMART SM01390 3 97 1.9E-55 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Clos_0520 d7c8268224faea4f1e564da624832576 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 9.1E-33 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Clos_2170 0febe8acfabc7d6a77a5b744bbdbe4a2 208 Gene3D G3DSA:3.40.50.300 1 197 2.0E-54 T 11-10-2018 Clos_2170 0febe8acfabc7d6a77a5b744bbdbe4a2 208 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 25 190 3.3E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Clos_2170 0febe8acfabc7d6a77a5b744bbdbe4a2 208 Pfam PF01926 50S ribosome-binding GTPase 25 142 1.1E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_2170 0febe8acfabc7d6a77a5b744bbdbe4a2 208 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 6.4E-71 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Clos_2170 0febe8acfabc7d6a77a5b744bbdbe4a2 208 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 27.441 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Clos_2170 0febe8acfabc7d6a77a5b744bbdbe4a2 208 SUPERFAMILY SSF52540 17 193 4.03E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2033 184647926713167db3d3cff9f3e824d8 812 Pfam PF13361 UvrD-like helicase C-terminal domain 540 635 2.7E-10 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Clos_2033 184647926713167db3d3cff9f3e824d8 812 SUPERFAMILY SSF52540 203 639 2.59E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2033 184647926713167db3d3cff9f3e824d8 812 Gene3D G3DSA:3.40.50.300 535 668 7.0E-10 T 11-10-2018 Clos_2033 184647926713167db3d3cff9f3e824d8 812 Gene3D G3DSA:3.40.50.300 202 390 2.9E-33 T 11-10-2018 Clos_2033 184647926713167db3d3cff9f3e824d8 812 Pfam PF13245 AAA domain 213 374 3.0E-20 T 11-10-2018 Clos_2139 980e2766971359ad6a0d9d33cfe6bf0a 362 Gene3D G3DSA:3.30.70.20 17 94 6.6E-14 T 11-10-2018 Clos_2139 980e2766971359ad6a0d9d33cfe6bf0a 362 SUPERFAMILY SSF54862 18 86 3.69E-15 T 11-10-2018 Clos_2139 980e2766971359ad6a0d9d33cfe6bf0a 362 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 258 269 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2139 980e2766971359ad6a0d9d33cfe6bf0a 362 Pfam PF12838 4Fe-4S dicluster domain 257 305 1.7E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2139 980e2766971359ad6a0d9d33cfe6bf0a 362 Gene3D G3DSA:3.30.70.20 251 328 8.9E-10 T 11-10-2018 Clos_2139 980e2766971359ad6a0d9d33cfe6bf0a 362 SUPERFAMILY SSF54862 248 307 2.74E-14 T 11-10-2018 Clos_2139 980e2766971359ad6a0d9d33cfe6bf0a 362 Pfam PF00037 4Fe-4S binding domain 54 75 3.2E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2139 980e2766971359ad6a0d9d33cfe6bf0a 362 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 59 70 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2193 9b17e50d2aa21f53947fbe5fcff9e0cf 308 Gene3D G3DSA:3.20.20.70 1 307 5.1E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2193 9b17e50d2aa21f53947fbe5fcff9e0cf 308 SMART SM00934 15 283 4.3E-27 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2193 9b17e50d2aa21f53947fbe5fcff9e0cf 308 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 278 8.9E-79 T 11-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Clos_2193 9b17e50d2aa21f53947fbe5fcff9e0cf 308 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 4 305 34.939 T 11-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Clos_2193 9b17e50d2aa21f53947fbe5fcff9e0cf 308 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 100 113 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2193 9b17e50d2aa21f53947fbe5fcff9e0cf 308 SUPERFAMILY SSF51366 2 287 6.0E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Clos_2193 9b17e50d2aa21f53947fbe5fcff9e0cf 308 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 56 276 8.4E-26 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 SUPERFAMILY SSF52540 303 734 4.67E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 Pfam PF13361 UvrD-like helicase C-terminal domain 301 656 8.7E-12 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 Gene3D G3DSA:3.40.50.300 499 684 1.8E-42 T 11-10-2018 Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 Gene3D G3DSA:3.40.50.300 277 398 2.2E-25 T 11-10-2018 Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 Gene3D G3DSA:3.40.50.300 125 268 7.2E-25 T 11-10-2018 Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 Gene3D G3DSA:3.40.50.300 1 124 2.3E-24 T 11-10-2018 Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 Pfam PF12705 PD-(D/E)XK nuclease superfamily 774 1112 5.7E-63 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1142 0.0 T 11-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1143 59.349 T 11-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 Clos_2300 d714d3add08fbd233813e28fd63fc392 1144 SUPERFAMILY SSF52980 769 992 1.79E-7 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 Gene3D G3DSA:3.40.50.720 1 255 1.1E-82 T 11-10-2018 Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 4.7E-61 T 11-10-2018 Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 7.7E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 7.7E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 7.7E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.7E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 7.7E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 7.7E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_0849 7ef873fcea9b40bf779514fa3985ec4a 255 SUPERFAMILY SSF51735 8 254 9.26E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 Pfam PF02743 Cache domain 28 252 4.7E-20 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 SUPERFAMILY SSF47384 355 427 2.94E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 6.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 6.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 6.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 6.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 SUPERFAMILY SSF55874 419 593 1.09E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 Gene3D G3DSA:3.30.450.20 148 304 4.1E-12 T 11-10-2018 Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 SMART SM00388 363 429 3.9E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 472 591 3.6E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 Gene3D G3DSA:1.10.287.130 355 427 3.0E-16 T 11-10-2018 Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 SMART SM00387 471 594 3.5E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0389 f46ce2be66f24f780eeb3763ed7dd599 604 Gene3D G3DSA:3.30.565.10 436 599 9.7E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_2847 5414bb79d501da7b86f02fd16a35f489 151 Gene3D G3DSA:3.40.630.30 3 149 3.2E-19 T 11-10-2018 Clos_2847 5414bb79d501da7b86f02fd16a35f489 151 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 5.1E-11 T 11-10-2018 IPR000182 GNAT domain Clos_2847 5414bb79d501da7b86f02fd16a35f489 151 SUPERFAMILY SSF55729 2 134 3.26E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 282 300 3.6E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 207 227 3.6E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 Gene3D G3DSA:3.40.50.11060 24 144 9.6E-43 T 11-10-2018 Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 SUPERFAMILY SSF52540 207 402 5.49E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 Gene3D G3DSA:3.40.50.300 204 372 1.1E-38 T 11-10-2018 Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 Hamap MF_00900 GTPase HflX [hflX]. 34 400 49.051 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 Pfam PF16360 GTP-binding GTPase Middle Region 121 199 4.7E-31 T 11-10-2018 IPR032305 GTP-binding protein, middle domain Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 Pfam PF13167 GTP-binding GTPase N-terminal 32 119 1.2E-34 T 11-10-2018 IPR025121 GTPase HflX, N-terminal Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 PIRSF PIRSF006809 4 427 6.2E-148 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 370 1.9E-140 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Clos_1786 995115e2cddb330d2b4be1b244e75fca 429 Pfam PF01926 50S ribosome-binding GTPase 207 333 1.4E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Clos_0916 2d3e8b6db7d9d26fff6491689bc17902 346 Pfam PF01032 FecCD transport family 19 341 2.6E-95 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_0916 2d3e8b6db7d9d26fff6491689bc17902 346 SUPERFAMILY SSF81345 8 341 2.48E-82 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0916 2d3e8b6db7d9d26fff6491689bc17902 346 Gene3D G3DSA:1.10.3470.10 6 345 1.1E-103 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_1237 ccc61959846a5d8a758f725bbbc21446 433 Pfam PF04055 Radical SAM superfamily 148 318 6.4E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1237 ccc61959846a5d8a758f725bbbc21446 433 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 418 7.1E-141 T 11-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 Clos_1237 ccc61959846a5d8a758f725bbbc21446 433 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Clos_1237 ccc61959846a5d8a758f725bbbc21446 433 SMART SM00729 142 360 1.9E-52 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_1237 ccc61959846a5d8a758f725bbbc21446 433 Pfam PF00919 Uncharacterized protein family UPF0004 3 98 1.0E-26 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Clos_1237 ccc61959846a5d8a758f725bbbc21446 433 SUPERFAMILY SSF102114 128 365 5.62E-57 T 11-10-2018 Clos_1237 ccc61959846a5d8a758f725bbbc21446 433 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 430 8.9E-138 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Clos_1237 ccc61959846a5d8a758f725bbbc21446 433 Gene3D G3DSA:3.80.30.20 139 374 1.8E-87 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Clos_1237 ccc61959846a5d8a758f725bbbc21446 433 Gene3D G3DSA:3.40.50.12160 2 137 4.2E-24 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Clos_2518 b708e6666bb30e63dbe7304009171c4a 270 Gene3D G3DSA:1.20.1330.10 48 221 1.1E-66 T 11-10-2018 Clos_2518 b708e6666bb30e63dbe7304009171c4a 270 SUPERFAMILY SSF64518 1 270 7.59E-95 T 11-10-2018 Clos_2518 b708e6666bb30e63dbe7304009171c4a 270 PRINTS PR00207 Flagellin signature 109 132 1.4E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Clos_2518 b708e6666bb30e63dbe7304009171c4a 270 PRINTS PR00207 Flagellin signature 35 52 1.4E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Clos_2518 b708e6666bb30e63dbe7304009171c4a 270 PRINTS PR00207 Flagellin signature 74 93 1.4E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Clos_2518 b708e6666bb30e63dbe7304009171c4a 270 Pfam PF00700 Bacterial flagellin C-terminal helical region 184 269 1.2E-29 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Clos_2518 b708e6666bb30e63dbe7304009171c4a 270 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.7E-44 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Clos_2518 b708e6666bb30e63dbe7304009171c4a 270 Gene3D G3DSA:1.10.8.410 222 270 3.0E-27 T 11-10-2018 Clos_1283 2f060a72d75fe7055f14784c366b4505 134 Gene3D G3DSA:3.30.420.10 4 134 6.0E-43 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_1283 2f060a72d75fe7055f14784c366b4505 134 SUPERFAMILY SSF53098 3 130 3.29E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_1283 2f060a72d75fe7055f14784c366b4505 134 Pfam PF13456 Reverse transcriptase-like 10 131 4.2E-29 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Clos_1629 7a029df5207337e62e28c782b0d3224d 144 SUPERFAMILY SSF54523 8 81 8.63E-8 T 11-10-2018 Clos_1629 7a029df5207337e62e28c782b0d3224d 144 Gene3D G3DSA:3.30.700.10 8 130 6.5E-7 T 11-10-2018 Clos_0569 f457887806db7208fc12b7a2a9dea032 261 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 21 258 2.4E-70 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Clos_0569 f457887806db7208fc12b7a2a9dea032 261 SUPERFAMILY SSF53927 5 258 2.59E-80 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Clos_0569 f457887806db7208fc12b7a2a9dea032 261 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 1 259 33.091 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Clos_0569 f457887806db7208fc12b7a2a9dea032 261 Pfam PF02634 FdhD/NarQ family 26 257 7.0E-83 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Clos_0569 f457887806db7208fc12b7a2a9dea032 261 Gene3D G3DSA:3.10.20.10 27 109 2.0E-16 T 11-10-2018 Clos_0569 f457887806db7208fc12b7a2a9dea032 261 PIRSF PIRSF015626 1 261 3.9E-90 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Clos_0569 f457887806db7208fc12b7a2a9dea032 261 Gene3D G3DSA:3.40.140.10 115 261 1.4E-52 T 11-10-2018 Clos_0777 e6436de4b8f0ecaaab14a545c06307d9 71 SMART SM00530 4 59 1.3E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_0777 e6436de4b8f0ecaaab14a545c06307d9 71 Pfam PF01381 Helix-turn-helix 7 59 6.4E-19 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_0777 e6436de4b8f0ecaaab14a545c06307d9 71 Gene3D G3DSA:1.10.260.40 1 64 2.2E-27 T 11-10-2018 Clos_0777 e6436de4b8f0ecaaab14a545c06307d9 71 SUPERFAMILY SSF47413 2 62 3.38E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1305 dc34cc28c21b5a351e467de8280f0620 74 Pfam PF11148 Protein of unknown function (DUF2922) 3 69 3.3E-23 T 11-10-2018 IPR021321 Protein of unknown function DUF2922 Clos_2753 f6bb80af0958102783a0f7a76ed7de72 183 Pfam PF08002 Protein of unknown function (DUF1697) 2 136 3.2E-36 T 11-10-2018 IPR012545 Protein of unknown function DUF1697 Clos_2753 f6bb80af0958102783a0f7a76ed7de72 183 Gene3D G3DSA:3.30.70.1280 1 88 1.5E-26 T 11-10-2018 Clos_2753 f6bb80af0958102783a0f7a76ed7de72 183 Gene3D G3DSA:3.30.70.1260 89 178 5.1E-12 T 11-10-2018 Clos_2753 f6bb80af0958102783a0f7a76ed7de72 183 PIRSF PIRSF008502 1 179 4.0E-50 T 11-10-2018 IPR012545 Protein of unknown function DUF1697 Clos_2753 f6bb80af0958102783a0f7a76ed7de72 183 SUPERFAMILY SSF160379 1 177 8.89E-47 T 11-10-2018 Clos_0815 1dfda8d1c42221f58c3dc049df086d87 306 SUPERFAMILY SSF51569 1 292 1.26E-66 T 11-10-2018 Clos_0815 1dfda8d1c42221f58c3dc049df086d87 306 Pfam PF00682 HMGL-like 7 282 4.2E-45 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Clos_0815 1dfda8d1c42221f58c3dc049df086d87 306 Gene3D G3DSA:3.20.20.70 3 295 1.7E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1448 917eeb2a6e2460222d72a52587d32ac5 177 Pfam PF02620 Uncharacterized ACR, COG1399 56 173 4.9E-27 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Clos_1711 ad91e38bff715c9e505270d2522d9f77 499 Gene3D G3DSA:3.80.30.20 142 493 1.3E-77 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Clos_1711 ad91e38bff715c9e505270d2522d9f77 499 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 94 494 2.4E-174 T 11-10-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ Clos_1711 ad91e38bff715c9e505270d2522d9f77 499 SUPERFAMILY SSF102114 167 486 7.46E-78 T 11-10-2018 Clos_1711 ad91e38bff715c9e505270d2522d9f77 499 SMART SM00729 176 399 8.0E-47 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_1711 ad91e38bff715c9e505270d2522d9f77 499 Pfam PF04055 Radical SAM superfamily 182 356 2.4E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1402 9cbf3f850a914f6c8a8329e705181c31 492 SUPERFAMILY SSF52540 18 237 1.52E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1402 9cbf3f850a914f6c8a8329e705181c31 492 Gene3D G3DSA:3.40.50.300 10 236 3.4E-11 T 11-10-2018 Clos_1402 9cbf3f850a914f6c8a8329e705181c31 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 8.1E-236 T 11-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 Clos_1402 9cbf3f850a914f6c8a8329e705181c31 492 PIRSF PIRSF007466 1 492 2.2E-267 T 11-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 Clos_1402 9cbf3f850a914f6c8a8329e705181c31 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 1 492 2.1E-227 T 11-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 Clos_2819 8eafb44b26c9c71c1304a752bd691d8f 133 SMART SM00226 3 127 4.7E-40 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Clos_2819 8eafb44b26c9c71c1304a752bd691d8f 133 Gene3D G3DSA:3.40.50.2300 2 132 4.6E-45 T 11-10-2018 Clos_2819 8eafb44b26c9c71c1304a752bd691d8f 133 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 124 2.5E-22 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Clos_2819 8eafb44b26c9c71c1304a752bd691d8f 133 SUPERFAMILY SSF52788 1 126 3.14E-36 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Clos_0234 f9a03313cf31b74de90e3a415e658ae5 428 SUPERFAMILY SSF48452 168 343 1.18E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_0234 f9a03313cf31b74de90e3a415e658ae5 428 SUPERFAMILY SSF47413 5 64 6.48E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_0234 f9a03313cf31b74de90e3a415e658ae5 428 Pfam PF12844 Helix-turn-helix domain 6 63 6.2E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_0234 f9a03313cf31b74de90e3a415e658ae5 428 SMART SM00530 8 62 8.0E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_0234 f9a03313cf31b74de90e3a415e658ae5 428 Gene3D G3DSA:1.25.40.10 2 277 2.9E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_2166 0875d9290b0103980c5b95f87a610745 233 Pfam PF00072 Response regulator receiver domain 8 117 3.5E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2166 0875d9290b0103980c5b95f87a610745 233 SUPERFAMILY SSF52172 7 122 1.35E-39 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2166 0875d9290b0103980c5b95f87a610745 233 SMART SM00862 153 227 2.3E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_2166 0875d9290b0103980c5b95f87a610745 233 SMART SM00448 6 116 8.1E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2166 0875d9290b0103980c5b95f87a610745 233 Gene3D G3DSA:1.10.10.10 129 231 2.3E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2166 0875d9290b0103980c5b95f87a610745 233 Gene3D G3DSA:3.40.50.2300 1 128 8.6E-37 T 11-10-2018 Clos_2166 0875d9290b0103980c5b95f87a610745 233 SUPERFAMILY SSF46894 136 228 4.33E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_2166 0875d9290b0103980c5b95f87a610745 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 2.1E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0883 f1534b17761ff27809061e6288a4ad24 467 PIRSF PIRSF006603 6 467 2.3E-106 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0883 f1534b17761ff27809061e6288a4ad24 467 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 438 4.9E-79 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0883 f1534b17761ff27809061e6288a4ad24 467 Pfam PF01554 MatE 264 425 2.5E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0883 f1534b17761ff27809061e6288a4ad24 467 Pfam PF01554 MatE 32 197 4.0E-27 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_2076 d981578bc67a5eb41ea27ee684435659 70 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 67 2.0E-26 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Clos_2076 d981578bc67a5eb41ea27ee684435659 70 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Clos_2076 d981578bc67a5eb41ea27ee684435659 70 Gene3D G3DSA:1.10.8.910 8 70 3.3E-27 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily Clos_2076 d981578bc67a5eb41ea27ee684435659 70 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 46 60 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Clos_1952 d9308cc0aeba31204451683ffd566b78 55 Pfam PF12655 Domain of unknown function (DUF3787) 4 55 1.4E-24 T 11-10-2018 IPR024209 Protein of unknown function DUF3787 Clos_2555 9c586bfd82ba52e09b6a205379baadbd 434 SUPERFAMILY SSF55205 9 424 4.14E-139 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Clos_2555 9c586bfd82ba52e09b6a205379baadbd 434 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 8 423 45.239 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2555 9c586bfd82ba52e09b6a205379baadbd 434 Gene3D G3DSA:3.65.10.10 16 420 1.4E-170 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Clos_2555 9c586bfd82ba52e09b6a205379baadbd 434 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 9 422 1.5E-179 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2555 9c586bfd82ba52e09b6a205379baadbd 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 14 413 2.6E-110 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Clos_2555 9c586bfd82ba52e09b6a205379baadbd 434 Gene3D G3DSA:3.65.10.10 28 237 1.4E-170 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Clos_2766 344c776bb707c4365c40b78f5cbb7574 171 SUPERFAMILY SSF88659 105 169 8.78E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_2766 344c776bb707c4365c40b78f5cbb7574 171 Pfam PF04542 Sigma-70 region 2 7 73 1.3E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2766 344c776bb707c4365c40b78f5cbb7574 171 Gene3D G3DSA:1.10.1740.10 2 74 4.4E-19 T 11-10-2018 Clos_2766 344c776bb707c4365c40b78f5cbb7574 171 SUPERFAMILY SSF88946 4 82 2.22E-18 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2766 344c776bb707c4365c40b78f5cbb7574 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 168 1.6E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_2766 344c776bb707c4365c40b78f5cbb7574 171 Pfam PF08281 Sigma-70, region 4 114 164 1.9E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_2766 344c776bb707c4365c40b78f5cbb7574 171 Gene3D G3DSA:1.10.10.10 107 170 2.7E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1358 f7725e62e6f55f0173f9025eaaeea2cb 363 Gene3D G3DSA:1.20.1090.10 172 359 2.2E-47 T 11-10-2018 Clos_1358 f7725e62e6f55f0173f9025eaaeea2cb 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 15 344 5.1E-103 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Clos_1358 f7725e62e6f55f0173f9025eaaeea2cb 363 SUPERFAMILY SSF56796 5 354 3.27E-92 T 11-10-2018 Clos_1358 f7725e62e6f55f0173f9025eaaeea2cb 363 PIRSF PIRSF001455 3 357 1.4E-100 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Clos_1358 f7725e62e6f55f0173f9025eaaeea2cb 363 Gene3D G3DSA:3.40.50.1970 1 171 2.4E-62 T 11-10-2018 Clos_1358 f7725e62e6f55f0173f9025eaaeea2cb 363 Pfam PF01761 3-dehydroquinate synthase 67 322 4.0E-90 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Clos_1358 f7725e62e6f55f0173f9025eaaeea2cb 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 353 62.004 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Clos_1337 79ea3def33f6d332d30f4abbe75bd01f 1006 SUPERFAMILY SSF53335 32 567 9.16E-57 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1337 79ea3def33f6d332d30f4abbe75bd01f 1006 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 404 410 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Clos_1337 79ea3def33f6d332d30f4abbe75bd01f 1006 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 235 249 5.1E-13 T 11-10-2018 Clos_1337 79ea3def33f6d332d30f4abbe75bd01f 1006 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 434 458 5.1E-13 T 11-10-2018 Clos_1337 79ea3def33f6d332d30f4abbe75bd01f 1006 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 170 186 5.1E-13 T 11-10-2018 Clos_1337 79ea3def33f6d332d30f4abbe75bd01f 1006 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 401 413 5.1E-13 T 11-10-2018 Clos_1337 79ea3def33f6d332d30f4abbe75bd01f 1006 Pfam PF02384 N-6 DNA Methylase 397 538 1.3E-9 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 Clos_2545 95c9e5e97f8d8f8d48389d685a8fa0c0 440 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 249 420 5.2E-32 T 11-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain Clos_2545 95c9e5e97f8d8f8d48389d685a8fa0c0 440 Gene3D G3DSA:3.40.50.10840 4 236 1.2E-65 T 11-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily Clos_2545 95c9e5e97f8d8f8d48389d685a8fa0c0 440 SUPERFAMILY SSF142764 4 427 6.93E-93 T 11-10-2018 Clos_2545 95c9e5e97f8d8f8d48389d685a8fa0c0 440 Pfam PF07005 Putative sugar-binding N-terminal domain 4 231 2.2E-57 T 11-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain Clos_2545 95c9e5e97f8d8f8d48389d685a8fa0c0 440 Gene3D G3DSA:3.40.980.20 239 429 2.1E-15 T 11-10-2018 Clos_0611 b66c3276994aac731d361cc1c7caa314 233 Gene3D G3DSA:3.40.50.2300 1 131 4.2E-33 T 11-10-2018 Clos_0611 b66c3276994aac731d361cc1c7caa314 233 SUPERFAMILY SSF52172 4 190 6.26E-39 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0611 b66c3276994aac731d361cc1c7caa314 233 SMART SM00448 5 115 2.6E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0611 b66c3276994aac731d361cc1c7caa314 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 3.9E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0611 b66c3276994aac731d361cc1c7caa314 233 SMART SM00862 154 229 1.3E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0611 b66c3276994aac731d361cc1c7caa314 233 Gene3D G3DSA:1.10.10.10 132 233 3.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0611 b66c3276994aac731d361cc1c7caa314 233 Pfam PF00072 Response regulator receiver domain 7 115 1.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1565 37edfdb62c1d9c5b022b0d7052a5149a 122 Gene3D G3DSA:3.30.1330.40 1 122 3.9E-42 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Clos_1565 37edfdb62c1d9c5b022b0d7052a5149a 122 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 5 119 1.6E-35 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Clos_1565 37edfdb62c1d9c5b022b0d7052a5149a 122 PIRSF PIRSF005965 1 122 2.4E-42 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Clos_1565 37edfdb62c1d9c5b022b0d7052a5149a 122 Pfam PF07736 Chorismate mutase type I 4 119 5.5E-42 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Clos_1565 37edfdb62c1d9c5b022b0d7052a5149a 122 SUPERFAMILY SSF55298 1 120 6.12E-39 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Clos_1565 37edfdb62c1d9c5b022b0d7052a5149a 122 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 9 118 5.0E-23 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Clos_1359 1997f03e0ff7616cfe9f5b1e6212b5d4 427 ProSitePatterns PS00104 EPSP synthase signature 1. 87 101 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Clos_1359 1997f03e0ff7616cfe9f5b1e6212b5d4 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 422 7.7E-120 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Clos_1359 1997f03e0ff7616cfe9f5b1e6212b5d4 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 9 427 31.765 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Clos_1359 1997f03e0ff7616cfe9f5b1e6212b5d4 427 SUPERFAMILY SSF55205 4 425 4.41E-129 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Clos_1359 1997f03e0ff7616cfe9f5b1e6212b5d4 427 Gene3D G3DSA:3.65.10.10 12 420 3.0E-146 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Clos_1359 1997f03e0ff7616cfe9f5b1e6212b5d4 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 13 425 1.1E-125 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Clos_1359 1997f03e0ff7616cfe9f5b1e6212b5d4 427 PIRSF PIRSF000505 1 427 1.2E-113 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Clos_1359 1997f03e0ff7616cfe9f5b1e6212b5d4 427 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Clos_1359 1997f03e0ff7616cfe9f5b1e6212b5d4 427 Gene3D G3DSA:3.65.10.10 21 229 3.0E-146 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Clos_1601 8659b4b72bc2db96715110fc81be6259 276 Gene3D G3DSA:1.10.10.10 154 215 4.0E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1601 8659b4b72bc2db96715110fc81be6259 276 Gene3D G3DSA:1.10.10.10 218 276 4.6E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1601 8659b4b72bc2db96715110fc81be6259 276 Gene3D G3DSA:1.10.10.2800 1 107 1.6E-29 T 11-10-2018 Clos_1601 8659b4b72bc2db96715110fc81be6259 276 Hamap MF_01114 Regulatory protein RecX [recX]. 42 209 14.387 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Clos_1601 8659b4b72bc2db96715110fc81be6259 276 Gene3D G3DSA:1.10.10.10 108 152 7.0E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1601 8659b4b72bc2db96715110fc81be6259 276 Pfam PF02631 RecX family 84 203 3.1E-27 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Clos_0383 8c5c12f07d61307dabb1f36368b933df 484 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 380 462 3.7E-11 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Clos_0383 8c5c12f07d61307dabb1f36368b933df 484 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 10 324 8.3E-70 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Clos_0383 8c5c12f07d61307dabb1f36368b933df 484 Gene3D G3DSA:3.40.640.10 9 283 8.1E-89 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0383 8c5c12f07d61307dabb1f36368b933df 484 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 223 237 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Clos_0383 8c5c12f07d61307dabb1f36368b933df 484 Gene3D G3DSA:3.90.100.10 386 477 1.1E-17 T 11-10-2018 Clos_0383 8c5c12f07d61307dabb1f36368b933df 484 SUPERFAMILY SSF53383 10 388 4.82E-89 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1451 d003ec88094a0f16b62a5badcfcbdd9e 335 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 331 2.1E-115 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Clos_1451 d003ec88094a0f16b62a5badcfcbdd9e 335 Gene3D G3DSA:3.40.718.10 1 334 2.1E-136 T 11-10-2018 Clos_1451 d003ec88094a0f16b62a5badcfcbdd9e 335 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 335 146.44 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Clos_1451 d003ec88094a0f16b62a5badcfcbdd9e 335 SUPERFAMILY SSF53659 1 329 5.35E-101 T 11-10-2018 Clos_1451 d003ec88094a0f16b62a5badcfcbdd9e 335 PIRSF PIRSF002465 1 333 5.7E-124 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Clos_1451 d003ec88094a0f16b62a5badcfcbdd9e 335 Pfam PF02504 Fatty acid synthesis protein 1 319 2.1E-117 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Clos_1782 c978b76ab3f4d43ea9fbaba9de14296b 133 Gene3D G3DSA:3.40.50.720 3 131 6.9E-40 T 11-10-2018 Clos_1782 c978b76ab3f4d43ea9fbaba9de14296b 133 SUPERFAMILY SSF51735 8 128 2.58E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1782 c978b76ab3f4d43ea9fbaba9de14296b 133 Pfam PF13380 CoA binding domain 15 128 6.9E-35 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Clos_1782 c978b76ab3f4d43ea9fbaba9de14296b 133 SMART SM00881 11 103 3.4E-20 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Clos_0863 6e768fb221440da00f2904642d0495a3 501 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 500 172.393 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Clos_0863 6e768fb221440da00f2904642d0495a3 501 Gene3D G3DSA:3.40.50.300 1 243 5.5E-54 T 11-10-2018 Clos_0863 6e768fb221440da00f2904642d0495a3 501 SUPERFAMILY SSF52317 191 401 2.01E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_0863 6e768fb221440da00f2904642d0495a3 501 Gene3D G3DSA:3.40.50.880 249 438 2.1E-25 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_0863 6e768fb221440da00f2904642d0495a3 501 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 251 444 1.4E-54 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Clos_0863 6e768fb221440da00f2904642d0495a3 501 SUPERFAMILY SSF52540 1 228 3.99E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0863 6e768fb221440da00f2904642d0495a3 501 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 493 1.1E-153 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Clos_0863 6e768fb221440da00f2904642d0495a3 501 Pfam PF13500 AAA domain 3 227 4.3E-19 T 11-10-2018 Clos_2056 3d3312565b682b81704be134973c2fd6 149 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 6 133 37.043 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Clos_2056 3d3312565b682b81704be134973c2fd6 149 Pfam PF01641 SelR domain 13 131 3.5E-51 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Clos_2056 3d3312565b682b81704be134973c2fd6 149 Gene3D G3DSA:2.170.150.20 2 149 3.9E-62 T 11-10-2018 Clos_2056 3d3312565b682b81704be134973c2fd6 149 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 141 6.2E-64 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Clos_2056 3d3312565b682b81704be134973c2fd6 149 SUPERFAMILY SSF51316 6 147 6.28E-61 T 11-10-2018 IPR011057 Mss4-like superfamily Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 Gene3D G3DSA:2.30.330.10 293 384 2.3E-32 T 11-10-2018 IPR036429 SpoA-like superfamily Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 305 375 1.0E-22 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 Pfam PF04509 CheC-like family 32 67 2.2E-13 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 Pfam PF04509 CheC-like family 129 164 1.7E-13 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 SUPERFAMILY SSF103039 29 216 1.48E-47 T 11-10-2018 IPR028976 CheC-like superfamily Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 Gene3D G3DSA:3.40.1550.10 29 223 8.8E-54 T 11-10-2018 IPR028976 CheC-like superfamily Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 PRINTS PR00956 Flagellar motor switch protein FliN signature 305 321 8.5E-25 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 PRINTS PR00956 Flagellar motor switch protein FliN signature 322 338 8.5E-25 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 PRINTS PR00956 Flagellar motor switch protein FliN signature 338 351 8.5E-25 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 PRINTS PR00956 Flagellar motor switch protein FliN signature 351 366 8.5E-25 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 302 377 1.3E-29 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Clos_1494 7164deb6fc2fad0e6774a8c235d50e30 385 SUPERFAMILY SSF101801 301 381 3.4E-23 T 11-10-2018 IPR036429 SpoA-like superfamily Clos_0229 fb03cc0b53deb5e9113706fa3a4b648c 592 Gene3D G3DSA:1.20.140.70 15 165 1.1E-12 T 11-10-2018 Clos_0229 fb03cc0b53deb5e9113706fa3a4b648c 592 Pfam PF01432 Peptidase family M3 193 574 3.7E-24 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Clos_0229 fb03cc0b53deb5e9113706fa3a4b648c 592 SUPERFAMILY SSF55486 47 587 1.37E-85 T 11-10-2018 Clos_0229 fb03cc0b53deb5e9113706fa3a4b648c 592 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 2 586 3.3E-188 T 11-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 Clos_0229 fb03cc0b53deb5e9113706fa3a4b648c 592 Gene3D G3DSA:1.10.1370.20 218 591 1.9E-112 T 11-10-2018 Clos_0229 fb03cc0b53deb5e9113706fa3a4b648c 592 Pfam PF08439 Oligopeptidase F 113 170 5.1E-9 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Clos_0350 35a587b650ae7af7b5fe14cfe2bb6d01 176 Pfam PF08281 Sigma-70, region 4 107 158 8.2E-8 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_0350 35a587b650ae7af7b5fe14cfe2bb6d01 176 SUPERFAMILY SSF88946 5 94 1.06E-21 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0350 35a587b650ae7af7b5fe14cfe2bb6d01 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 162 5.6E-23 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_0350 35a587b650ae7af7b5fe14cfe2bb6d01 176 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 43 74 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_0350 35a587b650ae7af7b5fe14cfe2bb6d01 176 Gene3D G3DSA:1.10.1740.10 14 88 8.3E-20 T 11-10-2018 Clos_0350 35a587b650ae7af7b5fe14cfe2bb6d01 176 Pfam PF04542 Sigma-70 region 2 22 87 6.7E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0350 35a587b650ae7af7b5fe14cfe2bb6d01 176 Gene3D G3DSA:1.10.10.10 93 166 6.6E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0350 35a587b650ae7af7b5fe14cfe2bb6d01 176 SUPERFAMILY SSF88659 102 163 5.61E-8 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1425 c60e3b951c949f992850d26191ea832c 399 Gene3D G3DSA:3.40.50.10300 186 399 8.3E-86 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Clos_1425 c60e3b951c949f992850d26191ea832c 399 Pfam PF02441 Flavoprotein 6 177 1.4E-46 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Clos_1425 c60e3b951c949f992850d26191ea832c 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 394 8.9E-144 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Clos_1425 c60e3b951c949f992850d26191ea832c 399 Gene3D G3DSA:3.40.50.1950 1 185 4.4E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Clos_1425 c60e3b951c949f992850d26191ea832c 399 SUPERFAMILY SSF52507 1 178 1.26E-61 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Clos_1425 c60e3b951c949f992850d26191ea832c 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 369 2.0E-72 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Clos_1425 c60e3b951c949f992850d26191ea832c 399 SUPERFAMILY SSF102645 185 397 1.27E-78 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Clos_1887 4ca10192b6560a6d9b18da5f18f8c6dd 60 SUPERFAMILY SSF47598 16 57 2.56E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Clos_0182 e4e43e6c3e41bad698701f3fd2498d38 318 Gene3D G3DSA:2.70.70.10 158 318 7.5E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_0182 e4e43e6c3e41bad698701f3fd2498d38 318 Pfam PF01551 Peptidase family M23 218 312 1.3E-33 T 11-10-2018 IPR016047 Peptidase M23 Clos_0182 e4e43e6c3e41bad698701f3fd2498d38 318 SUPERFAMILY SSF51261 176 314 6.8E-53 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_1281 c8e228262a5d755e3020b725d627c6c4 249 Gene3D G3DSA:3.40.50.150 15 179 7.4E-58 T 11-10-2018 Clos_1281 c8e228262a5d755e3020b725d627c6c4 249 PIRSF PIRSF018637 19 247 2.3E-77 T 11-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 Clos_1281 c8e228262a5d755e3020b725d627c6c4 249 SUPERFAMILY SSF53335 25 157 6.6E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1281 c8e228262a5d755e3020b725d627c6c4 249 Pfam PF12847 Methyltransferase domain 21 170 1.2E-57 T 11-10-2018 Clos_0548 42d653378e8d8025aeb1d5a5ed3fd9eb 60 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 5.8E-8 T 11-10-2018 Clos_0548 42d653378e8d8025aeb1d5a5ed3fd9eb 60 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 5.8E-8 T 11-10-2018 Clos_0548 42d653378e8d8025aeb1d5a5ed3fd9eb 60 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 5.8E-8 T 11-10-2018 Clos_0548 42d653378e8d8025aeb1d5a5ed3fd9eb 60 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 47 2.4E-16 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Clos_0548 42d653378e8d8025aeb1d5a5ed3fd9eb 60 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 54 16.519 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Clos_0548 42d653378e8d8025aeb1d5a5ed3fd9eb 60 Pfam PF02416 mttA/Hcf106 family 5 53 4.9E-17 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Clos_0637 4dbc71725898435f46ed0485231022ac 261 Pfam PF01012 Electron transfer flavoprotein domain 23 206 4.5E-48 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0637 4dbc71725898435f46ed0485231022ac 261 SMART SM00893 22 212 1.9E-60 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0637 4dbc71725898435f46ed0485231022ac 261 SUPERFAMILY SSF52402 1 256 1.05E-78 T 11-10-2018 Clos_0637 4dbc71725898435f46ed0485231022ac 261 Gene3D G3DSA:3.40.50.620 1 261 3.1E-96 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0637 4dbc71725898435f46ed0485231022ac 261 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Clos_0637 4dbc71725898435f46ed0485231022ac 261 PIRSF PIRSF000090 1 261 1.0E-93 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Clos_0676 f4d0f9253db8469cbf35b82cdbd5a12f 330 Gene3D G3DSA:3.40.190.10 42 328 2.5E-106 T 11-10-2018 Clos_0676 f4d0f9253db8469cbf35b82cdbd5a12f 330 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 328 1.9E-111 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Clos_0676 f4d0f9253db8469cbf35b82cdbd5a12f 330 Pfam PF16868 NMT1-like family 42 328 4.4E-95 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Clos_0676 f4d0f9253db8469cbf35b82cdbd5a12f 330 Gene3D G3DSA:3.40.190.10 127 265 2.5E-106 T 11-10-2018 Clos_0676 f4d0f9253db8469cbf35b82cdbd5a12f 330 SUPERFAMILY SSF53850 39 329 5.74E-81 T 11-10-2018 Clos_1094 ddf91b8d6b66db3d5dff51b6eb890952 263 Gene3D G3DSA:3.40.50.150 60 249 8.1E-56 T 11-10-2018 Clos_1094 ddf91b8d6b66db3d5dff51b6eb890952 263 Pfam PF13847 Methyltransferase domain 79 225 3.3E-36 T 11-10-2018 IPR025714 Methyltransferase domain Clos_1094 ddf91b8d6b66db3d5dff51b6eb890952 263 SUPERFAMILY SSF53335 68 233 3.16E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1531 1c5de9b1feaf4010a0454ff58b563ca9 299 Gene3D G3DSA:3.30.2350.10 1 238 5.7E-93 T 11-10-2018 Clos_1531 1c5de9b1feaf4010a0454ff58b563ca9 299 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 295 19.246 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1531 1c5de9b1feaf4010a0454ff58b563ca9 299 SUPERFAMILY SSF55120 2 225 9.21E-81 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1531 1c5de9b1feaf4010a0454ff58b563ca9 299 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 170 9.0E-59 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Clos_1531 1c5de9b1feaf4010a0454ff58b563ca9 299 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 2 209 7.4E-79 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_1531 1c5de9b1feaf4010a0454ff58b563ca9 299 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 171 226 1.6E-16 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 SUPERFAMILY SSF54211 1 143 1.52E-30 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 SUPERFAMILY SSF55060 158 280 3.24E-27 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 82 93 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 PRINTS PR00958 Homoserine kinase signature 89 104 8.3E-35 T 11-10-2018 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 PRINTS PR00958 Homoserine kinase signature 123 136 8.3E-35 T 11-10-2018 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 PRINTS PR00958 Homoserine kinase signature 241 256 8.3E-35 T 11-10-2018 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 PRINTS PR00958 Homoserine kinase signature 162 179 8.3E-35 T 11-10-2018 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 PRINTS PR00958 Homoserine kinase signature 9 24 8.3E-35 T 11-10-2018 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 PIRSF PIRSF000676 1 295 6.3E-83 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 Hamap MF_00384 Homoserine kinase [thrB]. 4 294 29.226 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 Gene3D G3DSA:3.30.230.10 1 157 3.9E-48 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 Gene3D G3DSA:3.30.70.890 158 284 1.1E-34 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 Pfam PF00288 GHMP kinases N terminal domain 75 136 1.6E-9 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 TIGRFAM TIGR00191 thrB: homoserine kinase 3 294 6.3E-78 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Clos_1955 7255c73fe6e17ea1a60469bb1530c090 297 Pfam PF08544 GHMP kinases C terminal 200 273 7.8E-7 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain Clos_2755 2a506b8fbd602b18ef91450da39f1eb0 286 SUPERFAMILY SSF111321 1 283 5.49E-81 T 11-10-2018 IPR036075 AF1104-like superfamily Clos_2755 2a506b8fbd602b18ef91450da39f1eb0 286 Gene3D G3DSA:1.10.285.20 68 139 5.5E-23 T 11-10-2018 Clos_2755 2a506b8fbd602b18ef91450da39f1eb0 286 PIRSF PIRSF006593 1 286 5.5E-83 T 11-10-2018 IPR014444 Uncharacterised conserved protein UCP006593 Clos_2755 2a506b8fbd602b18ef91450da39f1eb0 286 Gene3D G3DSA:3.40.50.10880 143 286 3.5E-53 T 11-10-2018 Clos_2755 2a506b8fbd602b18ef91450da39f1eb0 286 Pfam PF01937 Protein of unknown function DUF89 4 277 4.2E-54 T 11-10-2018 IPR002791 Domain of unknown function DUF89 Clos_1063 91a478cdccbac327d8dfc40b3f3ce140 233 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 3 221 1.4E-33 T 11-10-2018 IPR010178 Integral membrane protein 1906 Clos_1063 91a478cdccbac327d8dfc40b3f3ce140 233 Pfam PF07314 Protein of unknown function (DUF1461) 12 196 4.1E-49 T 11-10-2018 IPR010178 Integral membrane protein 1906 Clos_2373 27650d257a5edc0c307143e0b38d2b09 418 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 66 387 3.6E-94 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Clos_2373 27650d257a5edc0c307143e0b38d2b09 418 SUPERFAMILY SSF51445 55 399 1.16E-92 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Clos_2373 27650d257a5edc0c307143e0b38d2b09 418 Gene3D G3DSA:3.20.20.300 50 410 7.4E-122 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Clos_2373 27650d257a5edc0c307143e0b38d2b09 418 PRINTS PR00133 Glycosyl hydrolase family 3 signature 229 245 4.7E-5 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Clos_2373 27650d257a5edc0c307143e0b38d2b09 418 PRINTS PR00133 Glycosyl hydrolase family 3 signature 305 323 4.7E-5 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Clos_2373 27650d257a5edc0c307143e0b38d2b09 418 PRINTS PR00133 Glycosyl hydrolase family 3 signature 151 170 4.7E-5 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Clos_1544 9a4a36694733b863d8bca964c8c762e8 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 4.0E-39 T 11-10-2018 IPR007347 Sporulation stage V, protein S Clos_1544 9a4a36694733b863d8bca964c8c762e8 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 2.2E-40 T 11-10-2018 IPR007347 Sporulation stage V, protein S Clos_1544 9a4a36694733b863d8bca964c8c762e8 86 Gene3D G3DSA:3.30.110.20 1 86 3.2E-36 T 11-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 Clos_1148 7884f5141dfb48f320ad4c11aaf5c63f 390 Pfam PF00999 Sodium/hydrogen exchanger family 8 380 1.0E-41 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Clos_1148 7884f5141dfb48f320ad4c11aaf5c63f 390 Gene3D G3DSA:1.20.1530.20 1 388 3.3E-34 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Clos_2472 6171e45641c53586c2752e65837244d0 371 Gene3D G3DSA:1.10.10.60 259 314 1.4E-13 T 11-10-2018 Clos_2472 6171e45641c53586c2752e65837244d0 371 Pfam PF12833 Helix-turn-helix domain 286 362 1.0E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2472 6171e45641c53586c2752e65837244d0 371 Gene3D G3DSA:3.40.50.2300 2 154 1.6E-31 T 11-10-2018 Clos_2472 6171e45641c53586c2752e65837244d0 371 SUPERFAMILY SSF46689 314 364 1.21E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2472 6171e45641c53586c2752e65837244d0 371 SUPERFAMILY SSF46689 261 311 1.7E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2472 6171e45641c53586c2752e65837244d0 371 SMART SM00448 2 117 7.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2472 6171e45641c53586c2752e65837244d0 371 Pfam PF00072 Response regulator receiver domain 4 116 1.7E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2472 6171e45641c53586c2752e65837244d0 371 SMART SM00342 278 361 4.0E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Clos_2472 6171e45641c53586c2752e65837244d0 371 Gene3D G3DSA:1.10.10.2730 315 362 4.8E-14 T 11-10-2018 Clos_2472 6171e45641c53586c2752e65837244d0 371 SUPERFAMILY SSF52172 1 140 4.55E-31 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2149 a90c8a75fc7d54ca9643adc5eed3c12f 386 Gene3D G3DSA:3.40.50.11890 28 154 3.4E-40 T 11-10-2018 Clos_2149 a90c8a75fc7d54ca9643adc5eed3c12f 386 Gene3D G3DSA:3.40.50.11900 237 385 5.5E-42 T 11-10-2018 Clos_2149 a90c8a75fc7d54ca9643adc5eed3c12f 386 Gene3D G3DSA:1.20.1270.370 20 220 3.4E-40 T 11-10-2018 Clos_2149 a90c8a75fc7d54ca9643adc5eed3c12f 386 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 35 379 1.9E-87 T 11-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit Clos_0326 42e085f3dc1fe234d781bf233032fc5e 156 Gene3D G3DSA:3.40.50.1380 4 156 5.4E-64 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Clos_0326 42e085f3dc1fe234d781bf233032fc5e 156 SUPERFAMILY SSF52335 8 149 1.74E-54 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Clos_0326 42e085f3dc1fe234d781bf233032fc5e 156 ProSitePatterns PS01335 Methylglyoxal synthase active site. 68 76 - T 11-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Clos_0326 42e085f3dc1fe234d781bf233032fc5e 156 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 14 153 1.3E-55 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Clos_0326 42e085f3dc1fe234d781bf233032fc5e 156 SMART SM00851 28 121 5.2E-20 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Clos_0326 42e085f3dc1fe234d781bf233032fc5e 156 PIRSF PIRSF006614 11 154 1.9E-62 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Clos_0326 42e085f3dc1fe234d781bf233032fc5e 156 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 15 134 31.837 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Clos_0326 42e085f3dc1fe234d781bf233032fc5e 156 Pfam PF02142 MGS-like domain 29 120 1.4E-17 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 7.4E-66 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 SUPERFAMILY SSF53901 214 411 6.12E-75 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 PIRSF PIRSF000447 1 412 1.0E-190 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 6.6E-39 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 2.7E-202 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 Gene3D G3DSA:3.40.47.10 1 255 1.7E-102 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 SMART SM00825 Beta-ketoacyl synthase 5 412 5.1E-17 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 Gene3D G3DSA:3.40.47.10 256 400 2.1E-56 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_1457 15ab08cc1c8017bf25f76b419010101b 412 SUPERFAMILY SSF53901 3 250 1.83E-82 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_1242 a08c2a5ca83bf56382c7440c873287eb 333 Pfam PF12127 SigmaW regulon antibacterial 8 318 2.3E-162 T 11-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity Clos_1242 a08c2a5ca83bf56382c7440c873287eb 333 Hamap MF_01562 UPF0365 protein . 2 322 47.677 T 11-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity Clos_1695 51be9c546f91e4960b3e25b41d87709b 735 Pfam PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit 65 442 1.3E-46 T 11-10-2018 IPR015130 D-Lysine 5,6-aminomutase alpha subunit Clos_1695 51be9c546f91e4960b3e25b41d87709b 735 SUPERFAMILY SSF51703 3 448 2.79E-168 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Clos_1695 51be9c546f91e4960b3e25b41d87709b 735 Gene3D G3DSA:3.30.30.60 501 573 7.5E-34 T 11-10-2018 IPR036843 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain superfamily GO:0046983 Clos_1695 51be9c546f91e4960b3e25b41d87709b 735 Gene3D G3DSA:3.20.20.440 15 427 2.2E-204 T 11-10-2018 IPR037086 D-Lysine 5,6-aminomutase alpha subunit superfamily Clos_1695 51be9c546f91e4960b3e25b41d87709b 735 Pfam PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase 503 578 1.1E-30 T 11-10-2018 IPR028991 D-lysine 5,6-aminomutase beta subunit KamE, N-terminal GO:0046983 Clos_1695 51be9c546f91e4960b3e25b41d87709b 735 Pfam PF02310 B12 binding domain 599 718 1.8E-14 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_1695 51be9c546f91e4960b3e25b41d87709b 735 Gene3D G3DSA:3.40.50.280 583 732 6.1E-39 T 11-10-2018 Clos_1695 51be9c546f91e4960b3e25b41d87709b 735 SUPERFAMILY SSF52242 595 728 2.22E-31 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_2213 4610c3bafb55db133a7d4acdc94e423f 408 Pfam PF06792 Uncharacterised protein family (UPF0261) 2 399 2.5E-169 T 11-10-2018 IPR008322 Uncharacterised protein family UPF0261 Clos_2213 4610c3bafb55db133a7d4acdc94e423f 408 Gene3D G3DSA:3.40.50.12020 1 176 4.7E-61 T 11-10-2018 Clos_2213 4610c3bafb55db133a7d4acdc94e423f 408 PIRSF PIRSF033271 1 403 1.3E-156 T 11-10-2018 IPR008322 Uncharacterised protein family UPF0261 Clos_2213 4610c3bafb55db133a7d4acdc94e423f 408 Gene3D G3DSA:3.40.50.12030 183 402 4.1E-93 T 11-10-2018 Clos_2751 534367de63bd4f50b20c37ad69c46d28 308 Pfam PF00005 ABC transporter 17 156 1.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2751 534367de63bd4f50b20c37ad69c46d28 308 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2751 534367de63bd4f50b20c37ad69c46d28 308 SUPERFAMILY SSF52540 2 222 1.65E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2751 534367de63bd4f50b20c37ad69c46d28 308 SMART SM00382 26 204 2.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2751 534367de63bd4f50b20c37ad69c46d28 308 Gene3D G3DSA:3.40.50.300 1 255 1.8E-55 T 11-10-2018 Clos_0019 05cd3cf3f2af467e243d9325c1cf5067 334 SUPERFAMILY SSF55681 1 243 8.52E-78 T 11-10-2018 Clos_0019 05cd3cf3f2af467e243d9325c1cf5067 334 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 323 9.3E-109 T 11-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 Clos_0019 05cd3cf3f2af467e243d9325c1cf5067 334 Gene3D G3DSA:3.30.930.10 1 243 2.6E-78 T 11-10-2018 Clos_0019 05cd3cf3f2af467e243d9325c1cf5067 334 Pfam PF03099 Biotin/lipoate A/B protein ligase family 47 151 7.4E-14 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Clos_0019 05cd3cf3f2af467e243d9325c1cf5067 334 SUPERFAMILY SSF82649 244 331 1.2E-26 T 11-10-2018 Clos_0019 05cd3cf3f2af467e243d9325c1cf5067 334 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 245 326 2.5E-29 T 11-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 Clos_0019 05cd3cf3f2af467e243d9325c1cf5067 334 Gene3D G3DSA:3.30.390.50 244 330 2.8E-31 T 11-10-2018 Clos_1324 7296f5d6dd3f5dd8c1a51989c9a91f46 334 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 334 15.97 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Clos_1324 7296f5d6dd3f5dd8c1a51989c9a91f46 334 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 325 8.3E-66 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Clos_1324 7296f5d6dd3f5dd8c1a51989c9a91f46 334 SUPERFAMILY SSF69742 2 152 5.36E-36 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Clos_1324 7296f5d6dd3f5dd8c1a51989c9a91f46 334 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 152 2.0E-36 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Clos_1324 7296f5d6dd3f5dd8c1a51989c9a91f46 334 Gene3D G3DSA:3.30.460.30 1 155 9.4E-40 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Clos_1324 7296f5d6dd3f5dd8c1a51989c9a91f46 334 Gene3D G3DSA:3.40.50.720 160 304 1.5E-24 T 11-10-2018 Clos_1324 7296f5d6dd3f5dd8c1a51989c9a91f46 334 SUPERFAMILY SSF51735 177 296 1.32E-15 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1324 7296f5d6dd3f5dd8c1a51989c9a91f46 334 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 176 294 2.7E-22 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 Gene3D G3DSA:3.90.226.10 26 269 1.5E-82 T 11-10-2018 Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 239 248 3.2E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 217 228 3.2E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 117 131 3.2E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 188 205 3.2E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 151 169 3.2E-40 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 46 268 6.1E-105 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 Pfam PF01039 Carboxyl transferase domain 47 227 3.8E-23 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 SUPERFAMILY SSF52096 41 267 1.73E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_0396 28438397a55fa8d0b46ecc06396701e4 275 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 269 36.987 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Clos_2064 e607d4e4db239b74c40e58a2c24c220f 710 Pfam PF03477 ATP cone domain 5 94 4.7E-20 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Clos_2064 e607d4e4db239b74c40e58a2c24c220f 710 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 690 7.0E-192 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Clos_2064 e607d4e4db239b74c40e58a2c24c220f 710 Gene3D G3DSA:3.20.70.20 130 670 1.4E-116 T 11-10-2018 Clos_2064 e607d4e4db239b74c40e58a2c24c220f 710 SUPERFAMILY SSF51998 123 674 2.75E-162 T 11-10-2018 Clos_2064 e607d4e4db239b74c40e58a2c24c220f 710 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 689 1.0E-173 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Clos_0667 2861245967b6b66fd1f1cfbc92989582 220 Gene3D G3DSA:1.10.10.10 126 220 9.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0667 2861245967b6b66fd1f1cfbc92989582 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 3.3E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0667 2861245967b6b66fd1f1cfbc92989582 220 SMART SM00448 2 112 2.9E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0667 2861245967b6b66fd1f1cfbc92989582 220 SMART SM00862 146 217 7.8E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0667 2861245967b6b66fd1f1cfbc92989582 220 Gene3D G3DSA:3.40.50.2300 1 125 1.4E-31 T 11-10-2018 Clos_0667 2861245967b6b66fd1f1cfbc92989582 220 Pfam PF00072 Response regulator receiver domain 4 112 1.3E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0667 2861245967b6b66fd1f1cfbc92989582 220 SUPERFAMILY SSF52172 1 171 4.83E-33 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2553 81b10664af3b98f560e19986d94a983e 295 Gene3D G3DSA:2.70.70.10 131 295 2.9E-32 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_2553 81b10664af3b98f560e19986d94a983e 295 Pfam PF01551 Peptidase family M23 191 289 4.2E-23 T 11-10-2018 IPR016047 Peptidase M23 Clos_2553 81b10664af3b98f560e19986d94a983e 295 SUPERFAMILY SSF51261 144 293 1.78E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_0876 f2dcb3471341fd147f0d9cb54b0588e2 395 Pfam PF02515 CoA-transferase family III 5 371 8.5E-143 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 Clos_0876 f2dcb3471341fd147f0d9cb54b0588e2 395 Gene3D G3DSA:3.40.50.10540 5 389 6.0E-152 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Clos_0876 f2dcb3471341fd147f0d9cb54b0588e2 395 SUPERFAMILY SSF89796 1 394 2.62E-148 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Clos_0876 f2dcb3471341fd147f0d9cb54b0588e2 395 Gene3D G3DSA:3.30.1540.10 231 322 6.0E-152 T 11-10-2018 Clos_0880 757411090d6aa3c0e8529c2ce11704ef 226 Gene3D G3DSA:3.90.550.10 13 209 1.3E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0880 757411090d6aa3c0e8529c2ce11704ef 226 SUPERFAMILY SSF53448 19 202 2.21E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0880 757411090d6aa3c0e8529c2ce11704ef 226 Pfam PF12804 MobA-like NTP transferase domain 20 178 3.1E-36 T 11-10-2018 IPR025877 MobA-like NTP transferase Clos_1946 ffa8f859effb2366324ec758bfe011ee 603 SUPERFAMILY SSF52540 346 588 6.06E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1946 ffa8f859effb2366324ec758bfe011ee 603 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1946 ffa8f859effb2366324ec758bfe011ee 603 SUPERFAMILY SSF90123 5 335 2.49E-74 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1946 ffa8f859effb2366324ec758bfe011ee 603 Gene3D G3DSA:1.20.1560.10 4 337 3.7E-87 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1946 ffa8f859effb2366324ec758bfe011ee 603 SMART SM00382 378 564 2.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1946 ffa8f859effb2366324ec758bfe011ee 603 Gene3D G3DSA:3.40.50.300 345 602 5.6E-84 T 11-10-2018 Clos_1946 ffa8f859effb2366324ec758bfe011ee 603 Pfam PF00664 ABC transporter transmembrane region 21 308 2.0E-51 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_1946 ffa8f859effb2366324ec758bfe011ee 603 Pfam PF00005 ABC transporter 370 516 1.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1209 7717c6107ea39d0e09c9b4481dc072d3 544 Gene3D G3DSA:3.10.105.10 287 506 8.3E-122 T 11-10-2018 Clos_1209 7717c6107ea39d0e09c9b4481dc072d3 544 SUPERFAMILY SSF53850 42 527 5.43E-112 T 11-10-2018 Clos_1209 7717c6107ea39d0e09c9b4481dc072d3 544 Gene3D G3DSA:3.40.190.10 56 519 8.3E-122 T 11-10-2018 Clos_1209 7717c6107ea39d0e09c9b4481dc072d3 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 452 2.2E-80 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain Clos_1209 7717c6107ea39d0e09c9b4481dc072d3 544 Gene3D G3DSA:3.90.76.10 76 197 8.3E-122 T 11-10-2018 Clos_1209 7717c6107ea39d0e09c9b4481dc072d3 544 PIRSF PIRSF002741 1 541 1.5E-107 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Clos_2102 eef7e924a03d4b6736ba1574e9f1b989 281 SMART SM00900 44 118 4.8E-8 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2102 eef7e924a03d4b6736ba1574e9f1b989 281 SMART SM00900 206 280 1.5E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2102 eef7e924a03d4b6736ba1574e9f1b989 281 Pfam PF04205 FMN-binding domain 44 115 8.8E-13 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2102 eef7e924a03d4b6736ba1574e9f1b989 281 Pfam PF04205 FMN-binding domain 206 277 8.4E-13 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 Pfam PF08676 MutL C terminal dimerisation domain 432 571 7.3E-41 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 211 327 1.0E-37 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 3 612 25.544 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 4 307 1.4E-90 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 Gene3D G3DSA:3.30.230.10 215 327 7.5E-34 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 SMART SM01340 210 328 3.4E-50 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 Gene3D G3DSA:3.30.565.10 4 214 7.7E-63 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 128 2.2E-11 T 11-10-2018 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 SUPERFAMILY SSF118116 429 614 1.83E-51 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 SUPERFAMILY SSF54211 192 328 1.78E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 Gene3D G3DSA:3.30.1370.100 474 569 9.4E-59 T 11-10-2018 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 SMART SM00853 432 572 1.7E-41 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 Gene3D G3DSA:2.30.42.20 433 614 9.4E-59 T 11-10-2018 Clos_1553 e4cdf093f563e29e4f5615e5766a0ada 616 SUPERFAMILY SSF55874 2 214 7.99E-53 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0365 2706cf6771e17620955bb0b154cfb7f3 451 SUPERFAMILY SSF143968 294 437 1.96E-35 T 11-10-2018 Clos_0365 2706cf6771e17620955bb0b154cfb7f3 451 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 396 2.5E-101 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Clos_0365 2706cf6771e17620955bb0b154cfb7f3 451 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 421 1.7E-95 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Clos_0365 2706cf6771e17620955bb0b154cfb7f3 451 Gene3D G3DSA:3.40.1670.10 309 420 3.4E-32 T 11-10-2018 Clos_0365 2706cf6771e17620955bb0b154cfb7f3 451 SUPERFAMILY SSF50475 6 292 3.61E-74 T 11-10-2018 Clos_1997 a9bb833081da0331296c9fad720c9db2 137 SUPERFAMILY SSF55298 7 135 4.71E-22 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Clos_1997 a9bb833081da0331296c9fad720c9db2 137 Gene3D G3DSA:3.30.1330.40 5 134 7.7E-22 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Clos_1997 a9bb833081da0331296c9fad720c9db2 137 Pfam PF01042 Endoribonuclease L-PSP 29 132 1.0E-12 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Clos_0158 480390b41075012dd3910616d1dd7b25 83 Pfam PF12645 Helix-turn-helix domain 8 62 2.0E-18 T 11-10-2018 IPR024760 Helix-turn-helix, conjugative transposon-like Clos_2616 175b64f3272dfa2b996de3a15ce908e6 236 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2616 175b64f3272dfa2b996de3a15ce908e6 236 Pfam PF00005 ABC transporter 23 171 3.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2616 175b64f3272dfa2b996de3a15ce908e6 236 SUPERFAMILY SSF52540 3 226 9.12E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2616 175b64f3272dfa2b996de3a15ce908e6 236 Gene3D G3DSA:3.40.50.300 1 235 5.5E-64 T 11-10-2018 Clos_2616 175b64f3272dfa2b996de3a15ce908e6 236 SMART SM00382 32 220 1.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1269 27b5241330543f4f688178b37904fd4a 397 Gene3D G3DSA:2.40.30.170 320 391 3.4E-18 T 11-10-2018 Clos_1269 27b5241330543f4f688178b37904fd4a 397 Gene3D G3DSA:2.40.30.170 53 63 1.1E-6 T 11-10-2018 Clos_1269 27b5241330543f4f688178b37904fd4a 397 Gene3D G3DSA:2.40.50.100 281 318 3.4E-18 T 11-10-2018 Clos_1269 27b5241330543f4f688178b37904fd4a 397 Gene3D G3DSA:2.40.50.100 64 97 1.1E-6 T 11-10-2018 Clos_1269 27b5241330543f4f688178b37904fd4a 397 Gene3D G3DSA:1.10.287.470 98 145 1.1E-6 T 11-10-2018 Clos_1269 27b5241330543f4f688178b37904fd4a 397 Gene3D G3DSA:1.10.287.470 196 280 3.4E-18 T 11-10-2018 Clos_1269 27b5241330543f4f688178b37904fd4a 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 170 390 1.5E-7 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Clos_0613 2ede912b2fd5524bac3834e6f5f8c9f7 363 SMART SM00567 E-Z type HEAT repeats 123 152 65.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Clos_0613 2ede912b2fd5524bac3834e6f5f8c9f7 363 SMART SM00567 E-Z type HEAT repeats 277 306 24.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Clos_0613 2ede912b2fd5524bac3834e6f5f8c9f7 363 SMART SM00567 E-Z type HEAT repeats 246 275 9.7E-4 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Clos_0613 2ede912b2fd5524bac3834e6f5f8c9f7 363 Gene3D G3DSA:1.25.10.10 201 356 6.0E-19 T 11-10-2018 IPR011989 Armadillo-like helical Clos_0613 2ede912b2fd5524bac3834e6f5f8c9f7 363 Pfam PF13646 HEAT repeats 237 316 6.8E-15 T 11-10-2018 Clos_0613 2ede912b2fd5524bac3834e6f5f8c9f7 363 Gene3D G3DSA:1.25.10.110 105 192 3.9E-7 T 11-10-2018 Clos_0613 2ede912b2fd5524bac3834e6f5f8c9f7 363 SUPERFAMILY SSF48371 126 325 5.25E-27 T 11-10-2018 IPR016024 Armadillo-type fold Clos_2018 1909369ec4117b8e78b05ceb6f66a2cd 254 Gene3D G3DSA:3.20.20.370 28 247 4.3E-70 T 11-10-2018 Clos_2018 1909369ec4117b8e78b05ceb6f66a2cd 254 Pfam PF01522 Polysaccharide deacetylase 51 171 1.1E-35 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Clos_2018 1909369ec4117b8e78b05ceb6f66a2cd 254 SUPERFAMILY SSF88713 44 238 4.04E-66 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Clos_2018 1909369ec4117b8e78b05ceb6f66a2cd 254 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 50 238 3.3E-72 T 11-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB Clos_2327 092c57d4739182e4d98a97079e04c627 344 SMART SM00382 31 212 2.0E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2327 092c57d4739182e4d98a97079e04c627 344 Pfam PF07728 AAA domain (dynein-related subfamily) 97 202 8.0E-7 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Clos_2327 092c57d4739182e4d98a97079e04c627 344 Gene3D G3DSA:1.10.8.80 254 342 5.4E-25 T 11-10-2018 Clos_2327 092c57d4739182e4d98a97079e04c627 344 Gene3D G3DSA:3.40.50.300 5 209 5.5E-62 T 11-10-2018 Clos_2327 092c57d4739182e4d98a97079e04c627 344 SUPERFAMILY SSF52540 8 335 3.87E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0551 589b36182ea845cadcaa27605944b133 249 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 29 237 2.6E-32 T 11-10-2018 IPR010178 Integral membrane protein 1906 Clos_0551 589b36182ea845cadcaa27605944b133 249 Pfam PF07314 Protein of unknown function (DUF1461) 35 218 2.5E-48 T 11-10-2018 IPR010178 Integral membrane protein 1906 Clos_0779 87d474faca9ba4696a30566e519a6435 227 Pfam PF02517 CAAX protease self-immunity 118 214 6.0E-13 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Clos_0312 32befcc75071561d806f15f1924b2fc4 270 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0312 32befcc75071561d806f15f1924b2fc4 270 Gene3D G3DSA:3.40.50.300 1 252 1.1E-67 T 11-10-2018 Clos_0312 32befcc75071561d806f15f1924b2fc4 270 SMART SM00382 26 215 1.6E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0312 32befcc75071561d806f15f1924b2fc4 270 SUPERFAMILY SSF52540 1 228 2.45E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0312 32befcc75071561d806f15f1924b2fc4 270 Pfam PF00005 ABC transporter 18 165 1.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0745 902316cfc8e4342c8be7916c72f1e86b 299 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 299 1.5E-77 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Clos_0745 902316cfc8e4342c8be7916c72f1e86b 299 SUPERFAMILY SSF54506 3 298 6.6E-66 T 11-10-2018 Clos_0745 902316cfc8e4342c8be7916c72f1e86b 299 Pfam PF02567 Phenazine biosynthesis-like protein 9 295 1.9E-73 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Clos_0745 902316cfc8e4342c8be7916c72f1e86b 299 Gene3D G3DSA:3.10.310.10 128 288 1.8E-86 T 11-10-2018 Clos_0745 902316cfc8e4342c8be7916c72f1e86b 299 Gene3D G3DSA:3.10.310.10 7 290 1.8E-86 T 11-10-2018 Clos_0745 902316cfc8e4342c8be7916c72f1e86b 299 PIRSF PIRSF016184 1 299 1.3E-79 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 Clos_1127 fe0d2a18d7729d0f5ddfcafe2fea3e20 74 Pfam PF11148 Protein of unknown function (DUF2922) 3 69 7.9E-25 T 11-10-2018 IPR021321 Protein of unknown function DUF2922 Clos_0355 00613115cfa5941ac204ab538ae0bddb 229 SUPERFAMILY SSF56281 16 228 1.31E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_0355 00613115cfa5941ac204ab538ae0bddb 229 Gene3D G3DSA:3.60.15.10 10 229 1.3E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Clos_0355 00613115cfa5941ac204ab538ae0bddb 229 SMART SM00849 18 223 1.1E-28 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_0355 00613115cfa5941ac204ab538ae0bddb 229 Pfam PF00753 Metallo-beta-lactamase superfamily 22 223 7.4E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase Clos_0486 06080e722cea037a72b5318bcf4f1bbd 80 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 78 5.3E-11 T 11-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Clos_0486 06080e722cea037a72b5318bcf4f1bbd 80 SUPERFAMILY SSF55315 6 79 4.71E-15 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Clos_0486 06080e722cea037a72b5318bcf4f1bbd 80 Gene3D G3DSA:3.30.1330.30 3 79 3.3E-17 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Clos_2081 be854e20f14e42ccf7aa3599a2040789 658 Pfam PF02687 FtsX-like permease family 87 179 2.0E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_2081 be854e20f14e42ccf7aa3599a2040789 658 PIRSF PIRSF018968 5 658 3.5E-77 T 11-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 Clos_1185 c43298b83862127ee9d93f04dbb1774b 148 Gene3D G3DSA:1.10.10.10 2 144 1.6E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1185 c43298b83862127ee9d93f04dbb1774b 148 SUPERFAMILY SSF46785 7 140 4.4E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1185 c43298b83862127ee9d93f04dbb1774b 148 Pfam PF01047 MarR family 37 95 8.3E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_1185 c43298b83862127ee9d93f04dbb1774b 148 SMART SM00347 30 130 3.1E-21 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Clos_2163 799c494ab5895efba078b3e060067124 122 Pfam PF01022 Bacterial regulatory protein, arsR family 46 91 4.7E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2163 799c494ab5895efba078b3e060067124 122 SMART SM00418 39 117 1.1E-29 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2163 799c494ab5895efba078b3e060067124 122 Gene3D G3DSA:1.10.10.10 6 122 2.2E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2163 799c494ab5895efba078b3e060067124 122 SUPERFAMILY SSF46785 27 113 1.25E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2163 799c494ab5895efba078b3e060067124 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 88 103 5.7E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2163 799c494ab5895efba078b3e060067124 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 71 5.7E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2163 799c494ab5895efba078b3e060067124 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 5.7E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2163 799c494ab5895efba078b3e060067124 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 73 88 5.7E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 5 175 1.7E-44 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 PRINTS PR00125 ATP synthase delta subunit signature 74 85 9.8E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 PRINTS PR00125 ATP synthase delta subunit signature 85 99 9.8E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 PRINTS PR00125 ATP synthase delta subunit signature 5 24 9.8E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 PRINTS PR00125 ATP synthase delta subunit signature 150 168 9.8E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 PRINTS PR00125 ATP synthase delta subunit signature 135 150 9.8E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 177 20.611 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 Gene3D G3DSA:1.10.520.20 5 97 7.8E-15 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 SUPERFAMILY SSF47928 4 105 6.15E-23 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_2563 c3604aa8dbe6a5d02b8d03c55f11aab4 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 175 2.8E-50 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Clos_1753 21e2b813f788fec8262fd2d96e821e84 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 8.6E-45 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1753 21e2b813f788fec8262fd2d96e821e84 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 28.012 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1753 21e2b813f788fec8262fd2d96e821e84 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1753 21e2b813f788fec8262fd2d96e821e84 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 1.7E-41 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1753 21e2b813f788fec8262fd2d96e821e84 103 SUPERFAMILY SSF141091 1 102 6.02E-41 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1155 0b7d7db9ae139d301fa830cd423c658c 246 SUPERFAMILY SSF55469 57 244 3.14E-30 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_1155 0b7d7db9ae139d301fa830cd423c658c 246 Gene3D G3DSA:3.40.109.10 1 244 1.2E-68 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_1155 0b7d7db9ae139d301fa830cd423c658c 246 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 77 244 1.9E-44 T 11-10-2018 IPR020051 SagB-type dehydrogenase domain Clos_1155 0b7d7db9ae139d301fa830cd423c658c 246 Pfam PF00881 Nitroreductase family 62 243 2.2E-27 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Clos_0614 78e7113fdac67a8790397e11757ad017 482 Gene3D G3DSA:3.90.550.10 39 318 5.4E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0614 78e7113fdac67a8790397e11757ad017 482 Pfam PF13641 Glycosyltransferase like family 2 63 327 6.7E-22 T 11-10-2018 Clos_0614 78e7113fdac67a8790397e11757ad017 482 SUPERFAMILY SSF53448 52 373 1.88E-48 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_1656 f0bf5bf060e0f070327250655e095ad7 412 SUPERFAMILY SSF51412 12 146 2.01E-6 T 11-10-2018 Clos_1656 f0bf5bf060e0f070327250655e095ad7 412 Pfam PF01136 Peptidase family U32 78 309 1.5E-103 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Clos_1656 f0bf5bf060e0f070327250655e095ad7 412 Gene3D G3DSA:2.40.30.10 320 406 2.3E-30 T 11-10-2018 Clos_1656 f0bf5bf060e0f070327250655e095ad7 412 Pfam PF16325 Peptidase family U32 C-terminal domain 322 403 1.5E-28 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal Clos_1656 f0bf5bf060e0f070327250655e095ad7 412 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Clos_0691 d70ef93f2aaf42d0edf1427584186757 769 Gene3D G3DSA:3.40.50.300 192 353 2.8E-13 T 11-10-2018 Clos_0691 d70ef93f2aaf42d0edf1427584186757 769 Gene3D G3DSA:3.40.50.300 412 572 3.1E-8 T 11-10-2018 Clos_0691 d70ef93f2aaf42d0edf1427584186757 769 Gene3D G3DSA:3.40.50.300 594 769 2.0E-49 T 11-10-2018 Clos_0691 d70ef93f2aaf42d0edf1427584186757 769 SUPERFAMILY SSF52540 196 754 1.34E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0691 d70ef93f2aaf42d0edf1427584186757 769 Gene3D G3DSA:1.10.10.160 432 509 3.1E-8 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Clos_0691 d70ef93f2aaf42d0edf1427584186757 769 Pfam PF13245 AAA domain 207 569 6.0E-13 T 11-10-2018 Clos_0073 a57999bd033ccbe4a41b632610d44040 371 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 363 58.819 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Clos_0073 a57999bd033ccbe4a41b632610d44040 371 Gene3D G3DSA:3.90.1150.10 23 356 4.5E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_0073 a57999bd033ccbe4a41b632610d44040 371 SUPERFAMILY SSF53383 5 364 2.75E-81 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_0073 a57999bd033ccbe4a41b632610d44040 371 Gene3D G3DSA:3.40.640.10 46 271 4.5E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0073 a57999bd033ccbe4a41b632610d44040 371 Pfam PF00155 Aminotransferase class I and II 35 359 5.5E-53 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_0073 a57999bd033ccbe4a41b632610d44040 371 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 360 4.7E-100 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Clos_0523 bedc053b506ade8410a354f23e7a2c2d 279 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0523 bedc053b506ade8410a354f23e7a2c2d 279 Pfam PF00005 ABC transporter 25 172 9.9E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0523 bedc053b506ade8410a354f23e7a2c2d 279 Gene3D G3DSA:3.40.50.300 3 277 1.2E-73 T 11-10-2018 Clos_0523 bedc053b506ade8410a354f23e7a2c2d 279 SUPERFAMILY SSF52540 4 235 6.66E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0523 bedc053b506ade8410a354f23e7a2c2d 279 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 5 276 8.6E-123 T 11-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 Clos_0523 bedc053b506ade8410a354f23e7a2c2d 279 SMART SM00382 34 220 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0068 ad6ec8ccba19b23524e420c40c28d796 486 Gene3D G3DSA:3.90.1150.10 337 469 1.9E-47 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_0068 ad6ec8ccba19b23524e420c40c28d796 486 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 484 59.783 T 11-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 Clos_0068 ad6ec8ccba19b23524e420c40c28d796 486 SUPERFAMILY SSF53383 15 482 3.6E-109 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_0068 ad6ec8ccba19b23524e420c40c28d796 486 Gene3D G3DSA:3.40.640.10 86 313 6.1E-59 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0068 ad6ec8ccba19b23524e420c40c28d796 486 Pfam PF02347 Glycine cleavage system P-protein 32 301 5.2E-13 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Clos_0092 38cc3d727c242856929426ef10b9a986 260 Pfam PF01012 Electron transfer flavoprotein domain 22 205 4.3E-49 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0092 38cc3d727c242856929426ef10b9a986 260 SMART SM00893 22 212 3.8E-62 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Clos_0092 38cc3d727c242856929426ef10b9a986 260 Gene3D G3DSA:3.40.50.620 1 260 2.7E-95 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0092 38cc3d727c242856929426ef10b9a986 260 SUPERFAMILY SSF52402 1 256 1.12E-80 T 11-10-2018 Clos_0092 38cc3d727c242856929426ef10b9a986 260 PIRSF PIRSF000090 1 260 2.1E-92 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Clos_2099 0335454a04fcace682367f7091e921da 550 SUPERFAMILY SSF109604 366 546 5.8E-36 T 11-10-2018 Clos_2099 0335454a04fcace682367f7091e921da 550 Gene3D G3DSA:1.20.1480.50 261 347 2.6E-6 T 11-10-2018 Clos_2099 0335454a04fcace682367f7091e921da 550 Gene3D G3DSA:3.30.450.20 168 260 6.4E-13 T 11-10-2018 Clos_2099 0335454a04fcace682367f7091e921da 550 SMART SM00304 289 341 0.0024 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_2099 0335454a04fcace682367f7091e921da 550 Gene3D G3DSA:1.10.3210.10 361 550 5.9E-68 T 11-10-2018 Clos_2099 0335454a04fcace682367f7091e921da 550 Pfam PF01966 HD domain 388 508 8.6E-20 T 11-10-2018 IPR006674 HD domain Clos_2099 0335454a04fcace682367f7091e921da 550 Gene3D G3DSA:3.30.450.20 120 167 6.4E-13 T 11-10-2018 Clos_2099 0335454a04fcace682367f7091e921da 550 TIGRFAM TIGR00277 HDIG: HDIG domain 389 476 7.7E-8 T 11-10-2018 IPR006675 HDIG domain Clos_2099 0335454a04fcace682367f7091e921da 550 Pfam PF02743 Cache domain 49 251 4.7E-14 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_2099 0335454a04fcace682367f7091e921da 550 SMART SM00471 382 517 1.0E-10 T 11-10-2018 IPR003607 HD/PDEase domain Clos_0782 1bb35c76938437f3e4b1345b5e174a60 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 36 189 5.1E-20 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_0782 1bb35c76938437f3e4b1345b5e174a60 199 SUPERFAMILY SSF88946 23 112 1.49E-16 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0782 1bb35c76938437f3e4b1345b5e174a60 199 Gene3D G3DSA:1.10.10.10 114 196 2.5E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0782 1bb35c76938437f3e4b1345b5e174a60 199 Gene3D G3DSA:1.10.1740.10 23 104 4.8E-13 T 11-10-2018 Clos_0782 1bb35c76938437f3e4b1345b5e174a60 199 Pfam PF08281 Sigma-70, region 4 134 185 1.1E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_0782 1bb35c76938437f3e4b1345b5e174a60 199 Pfam PF04542 Sigma-70 region 2 48 106 7.0E-6 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0782 1bb35c76938437f3e4b1345b5e174a60 199 SUPERFAMILY SSF88659 124 190 2.06E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_2498 aa960c24d8b9bf5ec558f651da9ddeb7 240 PIRSF PIRSF039137 1 235 8.5E-114 T 11-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Clos_2498 aa960c24d8b9bf5ec558f651da9ddeb7 240 SMART SM00382 26 211 2.1E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2498 aa960c24d8b9bf5ec558f651da9ddeb7 240 Gene3D G3DSA:3.40.50.300 1 235 4.7E-65 T 11-10-2018 Clos_2498 aa960c24d8b9bf5ec558f651da9ddeb7 240 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2498 aa960c24d8b9bf5ec558f651da9ddeb7 240 SUPERFAMILY SSF52540 2 233 3.2E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2498 aa960c24d8b9bf5ec558f651da9ddeb7 240 Pfam PF00005 ABC transporter 17 162 4.6E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1599 0ba0c99b83f5395f76182044ff05a9cb 301 Pfam PF11382 Copper transport outer membrane protein, MctB 1 288 1.1E-37 T 11-10-2018 IPR021522 Copper transporter MctB GO:0016020|GO:0055070 Clos_1651 2d0a03bfcba61e026bfb532f949807fc 220 Pfam PF14172 Domain of unknown function (DUF4309) 78 218 3.7E-34 T 11-10-2018 IPR025453 Protein of unknown function DUF4309 Clos_1651 2d0a03bfcba61e026bfb532f949807fc 220 Gene3D G3DSA:3.40.33.10 32 208 1.2E-5 T 11-10-2018 IPR035940 CAP superfamily Clos_1342 b6d65ddd1df1de2586d8d0885ff5d42c 321 SUPERFAMILY SSF161098 91 302 1.96E-17 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1342 b6d65ddd1df1de2586d8d0885ff5d42c 321 Gene3D G3DSA:1.10.3720.10 86 312 2.9E-21 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1342 b6d65ddd1df1de2586d8d0885ff5d42c 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 319 1.3E-38 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_0079 cc24ab266bfc3d732eadb75be6eaabef 223 PIRSF PIRSF037984 1 222 8.1E-79 T 11-10-2018 IPR017342 S-adenosyl-L-methionine dependent methionine synthase, predicted Clos_0079 cc24ab266bfc3d732eadb75be6eaabef 223 SUPERFAMILY SSF56507 11 192 1.44E-29 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Clos_0079 cc24ab266bfc3d732eadb75be6eaabef 223 Gene3D G3DSA:3.40.109.40 3 200 1.5E-62 T 11-10-2018 Clos_2724 ac89bcdb7994a0547cf349d30ee15c7a 121 Pfam PF04304 Protein of unknown function (DUF454) 5 120 8.0E-35 T 11-10-2018 IPR007401 Protein of unknown function DUF454 Clos_2724 ac89bcdb7994a0547cf349d30ee15c7a 121 PIRSF PIRSF016789 4 121 9.3E-29 T 11-10-2018 IPR007401 Protein of unknown function DUF454 Clos_1240 b13a64c8e27b7ab5394e2984b2a7157f 147 Gene3D G3DSA:1.10.1510.10 1 90 2.2E-26 T 11-10-2018 Clos_1240 b13a64c8e27b7ab5394e2984b2a7157f 147 Gene3D G3DSA:1.10.10.410 91 146 5.6E-25 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Clos_1240 b13a64c8e27b7ab5394e2984b2a7157f 147 SUPERFAMILY SSF89095 1 146 1.1E-43 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Clos_1240 b13a64c8e27b7ab5394e2984b2a7157f 147 Pfam PF09424 Yqey-like protein 4 146 3.8E-52 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Clos_1912 3795802c881daac5fe225f51ba556101 490 Gene3D G3DSA:3.40.50.300 219 444 3.2E-37 T 11-10-2018 Clos_1912 3795802c881daac5fe225f51ba556101 490 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 4 435 8.4E-59 T 11-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Clos_1912 3795802c881daac5fe225f51ba556101 490 SUPERFAMILY SSF52540 11 429 6.02E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0844 717d402699ee0e1dc54c072891254c4c 397 Gene3D G3DSA:3.30.1330.100 9 113 1.5E-6 T 11-10-2018 Clos_0844 717d402699ee0e1dc54c072891254c4c 397 SUPERFAMILY SSF144010 7 396 5.36E-47 T 11-10-2018 Clos_0844 717d402699ee0e1dc54c072891254c4c 397 Pfam PF01996 F420-0:Gamma-glutamyl ligase 11 389 3.6E-84 T 11-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Clos_0324 a3ade7b9432b898ed7d7717638240183 224 Gene3D G3DSA:3.40.50.2300 1 124 3.2E-39 T 11-10-2018 Clos_0324 a3ade7b9432b898ed7d7717638240183 224 Gene3D G3DSA:1.10.10.10 125 224 8.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0324 a3ade7b9432b898ed7d7717638240183 224 SUPERFAMILY SSF46894 123 222 6.8E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_0324 a3ade7b9432b898ed7d7717638240183 224 SUPERFAMILY SSF52172 1 121 2.99E-39 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0324 a3ade7b9432b898ed7d7717638240183 224 Pfam PF00072 Response regulator receiver domain 3 112 2.8E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0324 a3ade7b9432b898ed7d7717638240183 224 SMART SM00862 146 221 1.8E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0324 a3ade7b9432b898ed7d7717638240183 224 SMART SM00448 1 112 1.1E-42 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0324 a3ade7b9432b898ed7d7717638240183 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 3.0E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0260 58d2932364970549fa7f9fb5806a2241 386 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 19 184 9.3E-35 T 11-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 Clos_0260 58d2932364970549fa7f9fb5806a2241 386 SUPERFAMILY SSF53756 65 375 4.36E-35 T 11-10-2018 Clos_0260 58d2932364970549fa7f9fb5806a2241 386 Gene3D G3DSA:3.40.50.2000 194 358 1.6E-30 T 11-10-2018 Clos_0260 58d2932364970549fa7f9fb5806a2241 386 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 209 342 1.3E-11 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Clos_0310 f8c53e3e6d5e22cbbf97ea522b420d8f 302 Gene3D G3DSA:3.40.50.1980 43 128 2.8E-27 T 11-10-2018 Clos_0310 f8c53e3e6d5e22cbbf97ea522b420d8f 302 Pfam PF01497 Periplasmic binding protein 63 278 4.8E-28 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_0310 f8c53e3e6d5e22cbbf97ea522b420d8f 302 Gene3D G3DSA:3.40.50.1980 130 302 1.2E-51 T 11-10-2018 Clos_0310 f8c53e3e6d5e22cbbf97ea522b420d8f 302 SUPERFAMILY SSF53807 44 301 1.26E-47 T 11-10-2018 Clos_2059 0519d97dcb127f6e60208501e8759b91 267 Gene3D G3DSA:3.40.630.30 45 262 4.1E-14 T 11-10-2018 Clos_2059 0519d97dcb127f6e60208501e8759b91 267 SUPERFAMILY SSF55729 131 261 1.03E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2059 0519d97dcb127f6e60208501e8759b91 267 Pfam PF13527 Acetyltransferase (GNAT) domain 132 254 3.9E-8 T 11-10-2018 Clos_0862 72fcfbf37629765dfa348327e8b04d5d 463 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 15 442 38.439 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Clos_0862 72fcfbf37629765dfa348327e8b04d5d 463 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 17 451 3.1E-126 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Clos_0862 72fcfbf37629765dfa348327e8b04d5d 463 SUPERFAMILY SSF52317 255 452 1.3E-31 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_0862 72fcfbf37629765dfa348327e8b04d5d 463 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 257 439 9.8E-31 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Clos_0862 72fcfbf37629765dfa348327e8b04d5d 463 Gene3D G3DSA:3.40.50.880 267 459 7.4E-11 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_0862 72fcfbf37629765dfa348327e8b04d5d 463 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 18 195 1.8E-14 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Clos_0862 72fcfbf37629765dfa348327e8b04d5d 463 Gene3D G3DSA:3.40.50.300 17 205 1.2E-23 T 11-10-2018 Clos_0862 72fcfbf37629765dfa348327e8b04d5d 463 SUPERFAMILY SSF52540 17 208 1.9E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1545 212e4925f029d4d7829a0f667f0558e4 275 Gene3D G3DSA:1.10.150.650 98 169 7.3E-90 T 11-10-2018 Clos_1545 212e4925f029d4d7829a0f667f0558e4 275 SMART SM00481 4 70 1.8E-16 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clos_1545 212e4925f029d4d7829a0f667f0558e4 275 Gene3D G3DSA:3.20.20.140 4 245 7.3E-90 T 11-10-2018 Clos_1545 212e4925f029d4d7829a0f667f0558e4 275 Pfam PF02811 PHP domain 6 144 5.5E-11 T 11-10-2018 IPR004013 PHP domain GO:0003824 Clos_1545 212e4925f029d4d7829a0f667f0558e4 275 SUPERFAMILY SSF89550 1 273 2.49E-52 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Clos_2675 81100484dac17dbbae07e5d767577d5b 187 Pfam PF02417 Chromate transporter 5 183 4.7E-44 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Clos_0707 6803ce279f8217aebe94b0b9bf4d3aa1 125 Gene3D G3DSA:1.10.10.10 10 125 9.8E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0707 6803ce279f8217aebe94b0b9bf4d3aa1 125 SUPERFAMILY SSF46785 6 80 1.02E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0707 6803ce279f8217aebe94b0b9bf4d3aa1 125 SMART SM00345 17 76 2.6E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0707 6803ce279f8217aebe94b0b9bf4d3aa1 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 4.8E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0534 8faf4e54e5b52a0f7fb9bea36c1682a4 319 Gene3D G3DSA:3.40.50.620 6 199 2.0E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_0534 8faf4e54e5b52a0f7fb9bea36c1682a4 319 SUPERFAMILY SSF52402 6 241 7.53E-51 T 11-10-2018 Clos_0534 8faf4e54e5b52a0f7fb9bea36c1682a4 319 Pfam PF00958 GMP synthase C terminal domain 227 318 1.0E-41 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Clos_0534 8faf4e54e5b52a0f7fb9bea36c1682a4 319 Pfam PF02540 NAD synthase 11 75 6.2E-6 T 11-10-2018 IPR022310 NAD/GMP synthase Clos_0534 8faf4e54e5b52a0f7fb9bea36c1682a4 319 Gene3D G3DSA:3.30.300.10 200 319 9.6E-51 T 11-10-2018 Clos_0534 8faf4e54e5b52a0f7fb9bea36c1682a4 319 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 10 319 5.0E-149 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Clos_0353 bb042549a3bd0b8de15ca22e8017ec9c 298 SUPERFAMILY SSF103481 204 297 7.32E-11 T 11-10-2018 Clos_0353 bb042549a3bd0b8de15ca22e8017ec9c 298 SUPERFAMILY SSF103481 41 146 4.84E-13 T 11-10-2018 Clos_0353 bb042549a3bd0b8de15ca22e8017ec9c 298 Pfam PF00892 EamA-like transporter family 6 142 4.0E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_0353 bb042549a3bd0b8de15ca22e8017ec9c 298 Pfam PF00892 EamA-like transporter family 159 297 1.4E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_1778 a5586b5b53e9f7d59eb04daff8c073b6 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 238 33.509 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Clos_1778 a5586b5b53e9f7d59eb04daff8c073b6 240 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 4 237 9.9E-92 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Clos_1778 a5586b5b53e9f7d59eb04daff8c073b6 240 Pfam PF01709 Transcriptional regulator 6 236 1.7E-93 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Clos_1778 a5586b5b53e9f7d59eb04daff8c073b6 240 Gene3D G3DSA:1.10.10.200 15 78 9.2E-26 T 11-10-2018 IPR017856 Integrase-like, N-terminal Clos_1778 a5586b5b53e9f7d59eb04daff8c073b6 240 SUPERFAMILY SSF75625 5 237 5.89E-90 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Clos_1778 a5586b5b53e9f7d59eb04daff8c073b6 240 Gene3D G3DSA:3.30.70.980 131 201 5.8E-56 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Clos_1778 a5586b5b53e9f7d59eb04daff8c073b6 240 Gene3D G3DSA:3.30.70.980 82 235 5.8E-56 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.4E-50 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 PRINTS PR00934 X-His dipeptidase (M25) signature 427 443 1.4E-50 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 PRINTS PR00934 X-His dipeptidase (M25) signature 449 471 1.4E-50 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 PRINTS PR00934 X-His dipeptidase (M25) signature 250 269 1.4E-50 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 PRINTS PR00934 X-His dipeptidase (M25) signature 205 222 1.4E-50 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.4E-50 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.4E-50 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.4E-50 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 SUPERFAMILY SSF53187 10 480 1.37E-54 T 11-10-2018 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 Gene3D G3DSA:3.40.630.10 1 261 6.9E-56 T 11-10-2018 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 Gene3D G3DSA:3.40.630.10 328 481 2.5E-23 T 11-10-2018 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 Pfam PF01546 Peptidase family M20/M25/M40 73 479 6.6E-20 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 PIRSF PIRSF016599 1 481 1.5E-176 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 Pfam PF07687 Peptidase dimerisation domain 200 290 2.2E-7 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Clos_0567 55cac678a5962b6f212aece8afa1ac9b 481 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 7 481 6.8E-177 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 Clos_1670 75ab17be7bf87c0833d0920ebe32e051 393 Gene3D G3DSA:3.90.1150.10 5 374 3.2E-159 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_1670 75ab17be7bf87c0833d0920ebe32e051 393 Gene3D G3DSA:3.40.640.10 16 257 3.2E-159 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1670 75ab17be7bf87c0833d0920ebe32e051 393 Pfam PF00266 Aminotransferase class-V 5 367 2.4E-83 T 11-10-2018 IPR000192 Aminotransferase class V domain Clos_1670 75ab17be7bf87c0833d0920ebe32e051 393 PIRSF PIRSF005572 2 382 1.8E-137 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Clos_1670 75ab17be7bf87c0833d0920ebe32e051 393 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Clos_1670 75ab17be7bf87c0833d0920ebe32e051 393 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 393 54.185 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Clos_1670 75ab17be7bf87c0833d0920ebe32e051 393 SUPERFAMILY SSF53383 4 377 6.52E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1670 75ab17be7bf87c0833d0920ebe32e051 393 TIGRFAM TIGR03402 FeS_nifS: cysteine desulfurase NifS 5 384 8.9E-186 T 11-10-2018 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal GO:0006520|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Clos_0553 8745aa0770762f897bb03421fee30242 330 Pfam PF00586 AIR synthase related protein, N-terminal domain 34 137 1.9E-13 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Clos_0553 8745aa0770762f897bb03421fee30242 330 SUPERFAMILY SSF56042 146 308 4.19E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Clos_0553 8745aa0770762f897bb03421fee30242 330 Pfam PF02769 AIR synthase related protein, C-terminal domain 152 305 8.7E-23 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Clos_0553 8745aa0770762f897bb03421fee30242 330 Gene3D G3DSA:3.90.650.10 145 327 2.4E-45 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Clos_0553 8745aa0770762f897bb03421fee30242 330 SUPERFAMILY SSF55326 5 142 9.07E-25 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Clos_0553 8745aa0770762f897bb03421fee30242 330 PIRSF PIRSF005644 1 328 3.5E-75 T 11-10-2018 IPR011854 Carbamoyl dehydratase HypE Clos_0553 8745aa0770762f897bb03421fee30242 330 Gene3D G3DSA:3.30.1330.10 2 139 2.0E-30 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Clos_0882 31663f8c2b4b546fde9c2427ecdf3643 188 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 186 25.473 T 11-10-2018 IPR022929 Putative manganese efflux pump MntP Clos_0882 31663f8c2b4b546fde9c2427ecdf3643 188 Pfam PF02659 Putative manganese efflux pump 32 183 5.9E-49 T 11-10-2018 IPR003810 Putative manganese efflux pump Clos_1840 df57f22740e0e14a4412bc267cf261c9 186 SUPERFAMILY SSF57802 152 182 2.9E-9 T 11-10-2018 Clos_1840 df57f22740e0e14a4412bc267cf261c9 186 Gene3D G3DSA:1.20.1260.10 2 146 1.0E-40 T 11-10-2018 IPR012347 Ferritin-like Clos_1840 df57f22740e0e14a4412bc267cf261c9 186 Pfam PF02915 Rubrerythrin 10 137 1.4E-24 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Clos_1840 df57f22740e0e14a4412bc267cf261c9 186 SUPERFAMILY SSF47240 5 146 2.63E-33 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_1840 df57f22740e0e14a4412bc267cf261c9 186 Gene3D G3DSA:2.20.28.10 147 184 1.7E-12 T 11-10-2018 Clos_2757 68d4d9c97d8cecdde159b18126f5374d 171 Gene3D G3DSA:1.10.1740.10 2 76 3.6E-10 T 11-10-2018 Clos_2757 68d4d9c97d8cecdde159b18126f5374d 171 Pfam PF08281 Sigma-70, region 4 111 159 4.8E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_2757 68d4d9c97d8cecdde159b18126f5374d 171 SUPERFAMILY SSF88659 104 168 8.97E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_2757 68d4d9c97d8cecdde159b18126f5374d 171 Gene3D G3DSA:1.10.10.10 100 167 8.8E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2757 68d4d9c97d8cecdde159b18126f5374d 171 SUPERFAMILY SSF88946 3 80 1.96E-11 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2757 68d4d9c97d8cecdde159b18126f5374d 171 Pfam PF04542 Sigma-70 region 2 17 74 1.8E-5 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_2757 68d4d9c97d8cecdde159b18126f5374d 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 162 1.9E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1048 131359a7f8ccade5494bbfef91151fab 115 SMART SM00530 5 60 5.8E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1048 131359a7f8ccade5494bbfef91151fab 115 Pfam PF01381 Helix-turn-helix 6 60 1.8E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1048 131359a7f8ccade5494bbfef91151fab 115 Gene3D G3DSA:1.10.260.40 1 113 1.4E-23 T 11-10-2018 Clos_1048 131359a7f8ccade5494bbfef91151fab 115 SUPERFAMILY SSF47413 2 68 9.01E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_0796 2556be09aa38cc37a8f2a09baf1472e4 476 PIRSF PIRSF012293 1 476 9.9E-190 T 11-10-2018 IPR009377 Ethanolamine utilisation EutA Clos_0796 2556be09aa38cc37a8f2a09baf1472e4 476 SUPERFAMILY SSF53067 7 266 3.02E-10 T 11-10-2018 Clos_0796 2556be09aa38cc37a8f2a09baf1472e4 476 Gene3D G3DSA:3.30.420.40 143 268 4.2E-6 T 11-10-2018 Clos_0796 2556be09aa38cc37a8f2a09baf1472e4 476 Pfam PF06277 Ethanolamine utilisation protein EutA 3 476 1.4E-205 T 11-10-2018 IPR009377 Ethanolamine utilisation EutA Clos_1564 69a0b23680c92f9052d0c5af8517b479 217 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 212 3.0E-79 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Clos_1564 69a0b23680c92f9052d0c5af8517b479 217 Hamap MF_00238 Cytidylate kinase [cmk]. 4 217 33.08 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Clos_1564 69a0b23680c92f9052d0c5af8517b479 217 Pfam PF02224 Cytidylate kinase 6 214 2.0E-80 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Clos_1564 69a0b23680c92f9052d0c5af8517b479 217 Gene3D G3DSA:3.40.50.300 2 217 1.5E-84 T 11-10-2018 Clos_1564 69a0b23680c92f9052d0c5af8517b479 217 SUPERFAMILY SSF52540 4 215 5.94E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0081 345168b644f7052332d27a8ec9558207 438 Pfam PF13349 Putative adhesin 290 433 2.2E-22 T 11-10-2018 IPR025164 Putative adhesin Clos_0081 345168b644f7052332d27a8ec9558207 438 Pfam PF08006 Protein of unknown function (DUF1700) 1 96 8.4E-22 T 11-10-2018 IPR012963 Protein of unknown function DUF1700 Clos_2638 433b7d582dfef4d1ed87e15d75b51019 356 Gene3D G3DSA:1.10.287.1080 229 353 1.1E-44 T 11-10-2018 Clos_2638 433b7d582dfef4d1ed87e15d75b51019 356 SUPERFAMILY SSF53790 2 257 2.09E-35 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Clos_2638 433b7d582dfef4d1ed87e15d75b51019 356 PIRSF PIRSF002845 1 356 1.7E-147 T 11-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted Clos_2638 433b7d582dfef4d1ed87e15d75b51019 356 Gene3D G3DSA:3.40.1010.10 3 118 1.4E-18 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Clos_2638 433b7d582dfef4d1ed87e15d75b51019 356 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 255 328 4.6E-29 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Clos_2638 433b7d582dfef4d1ed87e15d75b51019 356 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 206 7.4E-25 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Clos_2638 433b7d582dfef4d1ed87e15d75b51019 356 SUPERFAMILY SSF101386 231 332 2.62E-25 T 11-10-2018 Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 SMART SM00257 252 296 4.1E-10 T 11-10-2018 IPR018392 LysM domain Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 Pfam PF01551 Peptidase family M23 411 505 8.0E-36 T 11-10-2018 IPR016047 Peptidase M23 Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 SUPERFAMILY SSF51261 353 508 6.8E-56 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 Gene3D G3DSA:3.10.350.10 251 296 4.3E-12 T 11-10-2018 IPR036779 LysM domain superfamily Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 Pfam PF07501 G5 domain 308 381 4.5E-18 T 11-10-2018 IPR011098 G5 domain Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 Gene3D G3DSA:2.20.230.10 304 378 2.5E-15 T 11-10-2018 Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 Gene3D G3DSA:2.70.70.10 379 510 4.5E-46 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 SMART SM01208 304 382 2.6E-20 T 11-10-2018 IPR011098 G5 domain Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 Pfam PF01476 LysM domain 253 294 3.8E-9 T 11-10-2018 IPR018392 LysM domain Clos_2792 2a4c7a6799e37410bc2518b3c92142da 511 SUPERFAMILY SSF54106 252 295 4.05E-8 T 11-10-2018 Clos_0821 c3cbe2c48751a8cb7b736b2bed997238 576 Pfam PF00005 ABC transporter 349 496 6.2E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0821 c3cbe2c48751a8cb7b736b2bed997238 576 Gene3D G3DSA:3.40.50.300 329 575 9.4E-82 T 11-10-2018 Clos_0821 c3cbe2c48751a8cb7b736b2bed997238 576 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0821 c3cbe2c48751a8cb7b736b2bed997238 576 SUPERFAMILY SSF90123 2 314 1.2E-59 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0821 c3cbe2c48751a8cb7b736b2bed997238 576 SMART SM00382 358 544 3.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0821 c3cbe2c48751a8cb7b736b2bed997238 576 Pfam PF00664 ABC transporter transmembrane region 17 279 1.0E-28 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_0821 c3cbe2c48751a8cb7b736b2bed997238 576 SUPERFAMILY SSF52540 328 568 8.65E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0821 c3cbe2c48751a8cb7b736b2bed997238 576 Gene3D G3DSA:1.20.1560.10 1 315 8.2E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1297 5fce359278081905108aa0d8354420c5 84 SUPERFAMILY SSF88659 53 82 9.81E-7 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1297 5fce359278081905108aa0d8354420c5 84 Pfam PF13384 Homeodomain-like domain 40 83 1.2E-5 T 11-10-2018 Clos_1297 5fce359278081905108aa0d8354420c5 84 Gene3D G3DSA:1.10.10.10 44 84 5.4E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1115 817e8aaeab5f9ca16e5e5ba110f75156 136 Pfam PF00581 Rhodanese-like domain 18 109 4.0E-6 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_1115 817e8aaeab5f9ca16e5e5ba110f75156 136 Gene3D G3DSA:3.40.250.10 2 120 1.6E-15 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_1115 817e8aaeab5f9ca16e5e5ba110f75156 136 SMART SM00450 17 113 9.6E-6 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_1115 817e8aaeab5f9ca16e5e5ba110f75156 136 SUPERFAMILY SSF52821 14 116 4.45E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_0430 48cd79f6cecee1770404377870de9a6c 301 Gene3D G3DSA:1.10.510.10 8 282 2.3E-28 T 11-10-2018 Clos_0430 48cd79f6cecee1770404377870de9a6c 301 SMART SM00220 21 284 7.6E-10 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Clos_0430 48cd79f6cecee1770404377870de9a6c 301 Pfam PF00069 Protein kinase domain 21 266 3.0E-23 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Clos_0430 48cd79f6cecee1770404377870de9a6c 301 SUPERFAMILY SSF56112 19 228 7.99E-30 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Clos_2383 39eb97688f6207d8e33aa75ae86c7da8 490 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 14 460 8.0E-121 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 Clos_2383 39eb97688f6207d8e33aa75ae86c7da8 490 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 9 476 43.772 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 Clos_1552 b5fbafef72f34b1c0feba2de744060ed 313 Gene3D G3DSA:3.40.50.300 9 287 3.9E-106 T 11-10-2018 Clos_1552 b5fbafef72f34b1c0feba2de744060ed 313 SUPERFAMILY SSF52540 2 307 1.95E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1552 b5fbafef72f34b1c0feba2de744060ed 313 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 300 31.534 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Clos_1552 b5fbafef72f34b1c0feba2de744060ed 313 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 288 2.0E-99 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Clos_1552 b5fbafef72f34b1c0feba2de744060ed 313 Pfam PF01715 IPP transferase 38 284 5.2E-84 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Clos_1552 b5fbafef72f34b1c0feba2de744060ed 313 Gene3D G3DSA:1.10.20.140 112 184 3.9E-106 T 11-10-2018 Clos_1552 b5fbafef72f34b1c0feba2de744060ed 313 SUPERFAMILY SSF52540 6 152 1.06E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1184 2ca05f848cd69666bc6b6df83edc3f41 295 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 295 2.5E-68 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase Clos_1184 2ca05f848cd69666bc6b6df83edc3f41 295 Gene3D G3DSA:2.60.200.40 128 287 6.3E-41 T 11-10-2018 Clos_1184 2ca05f848cd69666bc6b6df83edc3f41 295 SMART SM00046 3 131 1.1E-4 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Clos_1184 2ca05f848cd69666bc6b6df83edc3f41 295 SUPERFAMILY SSF111331 3 295 2.62E-75 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Clos_1184 2ca05f848cd69666bc6b6df83edc3f41 295 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 125 1.5E-28 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Clos_1184 2ca05f848cd69666bc6b6df83edc3f41 295 Gene3D G3DSA:3.40.50.10330 1 127 4.9E-37 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Clos_1665 b66a5e5e86a8502ced3e193121576bbd 85 Pfam PF06135 Bacterial protein of unknown function (DUF965) 7 83 5.7E-38 T 11-10-2018 IPR009309 Uncharacterised protein family UPF0297 Clos_1665 b66a5e5e86a8502ced3e193121576bbd 85 PIRSF PIRSF037258 2 85 7.7E-39 T 11-10-2018 IPR009309 Uncharacterised protein family UPF0297 Clos_1665 b66a5e5e86a8502ced3e193121576bbd 85 Hamap MF_01507 UPF0297 protein . 2 85 26.169 T 11-10-2018 IPR009309 Uncharacterised protein family UPF0297 Clos_2712 b59f0fd2c9157666c38b4966617d0182 413 SUPERFAMILY SSF51735 97 269 2.96E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_2712 b59f0fd2c9157666c38b4966617d0182 413 Gene3D G3DSA:3.40.50.720 102 273 6.6E-22 T 11-10-2018 Clos_2712 b59f0fd2c9157666c38b4966617d0182 413 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 114 254 4.2E-6 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Clos_0568 eb333d9761247cc18b04439ecaef3e9e 292 Pfam PF08668 HDOD domain 17 220 1.9E-30 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Clos_0568 eb333d9761247cc18b04439ecaef3e9e 292 Gene3D G3DSA:1.10.3210.10 2 288 1.7E-44 T 11-10-2018 Clos_0568 eb333d9761247cc18b04439ecaef3e9e 292 SUPERFAMILY SSF109604 14 284 3.77E-42 T 11-10-2018 Clos_1522 728a517cde2e44605039c8c44596e35a 210 Pfam PF00535 Glycosyl transferase family 2 5 125 1.3E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Clos_1522 728a517cde2e44605039c8c44596e35a 210 SUPERFAMILY SSF53448 1 190 2.63E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_1522 728a517cde2e44605039c8c44596e35a 210 Gene3D G3DSA:3.90.550.10 1 210 5.8E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0615 3f750067b2d3392e2a5314c5cc791db6 311 Gene3D G3DSA:3.40.50.300 56 296 6.2E-17 T 11-10-2018 Clos_0615 3f750067b2d3392e2a5314c5cc791db6 311 SUPERFAMILY SSF52540 60 281 2.24E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0615 3f750067b2d3392e2a5314c5cc791db6 311 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 227 272 1.7E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Clos_2823 d3e1f6b86b1fcce0fb0274c4899d65cb 472 Gene3D G3DSA:3.40.50.1100 60 365 2.9E-39 T 11-10-2018 Clos_2823 d3e1f6b86b1fcce0fb0274c4899d65cb 472 Gene3D G3DSA:3.40.50.1100 98 206 2.9E-39 T 11-10-2018 Clos_2823 d3e1f6b86b1fcce0fb0274c4899d65cb 472 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 59 365 3.5E-47 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Clos_2823 d3e1f6b86b1fcce0fb0274c4899d65cb 472 SUPERFAMILY SSF53686 32 366 4.45E-53 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clos_0337 3f17e34ed12ffd98094be96000bc34d1 281 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 275 39.035 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Clos_0337 3f17e34ed12ffd98094be96000bc34d1 281 Gene3D G3DSA:3.20.20.150 1 281 3.6E-92 T 11-10-2018 Clos_0337 3f17e34ed12ffd98094be96000bc34d1 281 SMART SM00518 3 275 5.9E-98 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Clos_0337 3f17e34ed12ffd98094be96000bc34d1 281 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 5.2E-30 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Clos_0337 3f17e34ed12ffd98094be96000bc34d1 281 SUPERFAMILY SSF51658 2 276 1.57E-86 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily Clos_0337 3f17e34ed12ffd98094be96000bc34d1 281 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 172 179 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Clos_0337 3f17e34ed12ffd98094be96000bc34d1 281 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 210 226 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Clos_0337 3f17e34ed12ffd98094be96000bc34d1 281 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 272 1.1E-88 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Clos_1785 b196e55cb28b77535951c19729093f87 180 SUPERFAMILY SSF48371 50 171 3.94E-16 T 11-10-2018 IPR016024 Armadillo-type fold Clos_1785 b196e55cb28b77535951c19729093f87 180 Pfam PF13646 HEAT repeats 87 166 2.9E-13 T 11-10-2018 Clos_1785 b196e55cb28b77535951c19729093f87 180 SMART SM00567 E-Z type HEAT repeats 123 152 0.18 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Clos_1785 b196e55cb28b77535951c19729093f87 180 SMART SM00567 E-Z type HEAT repeats 92 121 3.6 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Clos_1785 b196e55cb28b77535951c19729093f87 180 Gene3D G3DSA:1.25.10.10 20 178 5.2E-18 T 11-10-2018 IPR011989 Armadillo-like helical Clos_0644 d6c25ddd5b3fcf4037f6149129050a67 211 Gene3D G3DSA:3.40.109.10 2 211 1.1E-52 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_0644 d6c25ddd5b3fcf4037f6149129050a67 211 Pfam PF00881 Nitroreductase family 7 189 9.8E-36 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Clos_0644 d6c25ddd5b3fcf4037f6149129050a67 211 SUPERFAMILY SSF55469 1 210 1.09E-44 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Clos_2869 456347e02061d34e8e0a270a101ef7f5 265 SUPERFAMILY SSF109709 93 202 3.66E-32 T 11-10-2018 Clos_2869 456347e02061d34e8e0a270a101ef7f5 265 Gene3D G3DSA:3.90.1530.30 22 84 2.3E-25 T 11-10-2018 Clos_2869 456347e02061d34e8e0a270a101ef7f5 265 SUPERFAMILY SSF110849 11 102 3.14E-25 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Clos_2869 456347e02061d34e8e0a270a101ef7f5 265 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 5 185 1.6E-49 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Clos_2869 456347e02061d34e8e0a270a101ef7f5 265 SMART SM00470 9 100 1.2E-30 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Clos_2869 456347e02061d34e8e0a270a101ef7f5 265 Gene3D G3DSA:1.10.10.2830 87 201 7.8E-37 T 11-10-2018 Clos_2869 456347e02061d34e8e0a270a101ef7f5 265 Pfam PF02195 ParB-like nuclease domain 10 99 8.0E-23 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Clos_2869 456347e02061d34e8e0a270a101ef7f5 265 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 8 264 1.5E-95 T 11-10-2018 IPR023705 Nucleoid occlusion protein Clos_0090 a6b7523bf46c8e1b348612fe75fa7c11 138 Pfam PF01575 MaoC like domain 18 119 2.6E-23 T 11-10-2018 IPR002539 MaoC-like dehydratase domain Clos_0090 a6b7523bf46c8e1b348612fe75fa7c11 138 Gene3D G3DSA:3.10.129.10 3 138 8.8E-44 T 11-10-2018 Clos_0090 a6b7523bf46c8e1b348612fe75fa7c11 138 SUPERFAMILY SSF54637 3 138 1.58E-40 T 11-10-2018 IPR029069 HotDog domain superfamily Clos_2476 3c56f440d1f1b76558cac1fcea0fd2c8 386 Gene3D G3DSA:2.30.40.10 4 379 1.2E-133 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_2476 3c56f440d1f1b76558cac1fcea0fd2c8 386 SUPERFAMILY SSF51338 2 384 6.2E-28 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_2476 3c56f440d1f1b76558cac1fcea0fd2c8 386 Pfam PF01979 Amidohydrolase family 51 382 2.9E-22 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Clos_2476 3c56f440d1f1b76558cac1fcea0fd2c8 386 SUPERFAMILY SSF51556 54 349 1.61E-53 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_2476 3c56f440d1f1b76558cac1fcea0fd2c8 386 Gene3D G3DSA:3.20.20.140 55 345 1.2E-133 T 11-10-2018 Clos_2387 eb2fcab56bba3171169893da6f2f725a 509 Gene3D G3DSA:3.40.309.10 223 405 6.1E-172 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Clos_2387 eb2fcab56bba3171169893da6f2f725a 509 SUPERFAMILY SSF53720 11 449 6.41E-79 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Clos_2387 eb2fcab56bba3171169893da6f2f725a 509 Pfam PF00171 Aldehyde dehydrogenase family 22 274 9.0E-22 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Clos_2387 eb2fcab56bba3171169893da6f2f725a 509 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 5 506 1.8E-235 T 11-10-2018 IPR013357 Acetaldehyde dehydrogenase, acetylating Clos_2387 eb2fcab56bba3171169893da6f2f725a 509 Gene3D G3DSA:3.40.605.10 16 443 6.1E-172 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Clos_2386 e15e60b9756735427aee50c0ea728a4d 216 PIRSF PIRSF010130 1 216 1.8E-86 T 11-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Clos_2386 e15e60b9756735427aee50c0ea728a4d 216 Pfam PF06130 Phosphate propanoyltransferase 32 111 2.0E-29 T 11-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Clos_2386 e15e60b9756735427aee50c0ea728a4d 216 Pfam PF06130 Phosphate propanoyltransferase 141 206 1.8E-16 T 11-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 Gene3D G3DSA:3.40.50.720 4 330 3.9E-123 T 11-10-2018 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 SUPERFAMILY SSF51735 1 152 1.39E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 1.4E-27 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.4E-27 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 1.4E-27 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.4E-27 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.4E-27 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 308 1.1E-44 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 2.6E-32 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 SMART SM00846 3 153 2.4E-81 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 SUPERFAMILY SSF55347 153 318 8.73E-51 T 11-10-2018 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 Gene3D G3DSA:3.30.360.10 152 319 3.9E-123 T 11-10-2018 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 329 1.2E-111 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_0604 8acad9729468a2a22abf36ebba3bcff2 337 PIRSF PIRSF000149 1 337 3.5E-104 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Clos_1929 3b5b013aeb0a6d4150bf665d9f7cd472 181 Pfam PF00583 Acetyltransferase (GNAT) family 68 158 7.7E-9 T 11-10-2018 IPR000182 GNAT domain Clos_1929 3b5b013aeb0a6d4150bf665d9f7cd472 181 Gene3D G3DSA:3.40.630.30 18 179 8.3E-19 T 11-10-2018 Clos_1929 3b5b013aeb0a6d4150bf665d9f7cd472 181 SUPERFAMILY SSF55729 17 168 3.84E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0515 6975043191f6096ac2e5a745e1fdcf15 92 SUPERFAMILY SSF50104 6 88 3.31E-12 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Clos_2135 91cd71c447f944272a5f7c9b47d133c6 248 Gene3D G3DSA:3.40.50.300 1 248 1.6E-58 T 11-10-2018 Clos_2135 91cd71c447f944272a5f7c9b47d133c6 248 Pfam PF00005 ABC transporter 20 168 3.4E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2135 91cd71c447f944272a5f7c9b47d133c6 248 SMART SM00382 29 218 1.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2135 91cd71c447f944272a5f7c9b47d133c6 248 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2135 91cd71c447f944272a5f7c9b47d133c6 248 SUPERFAMILY SSF52540 3 221 1.07E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1464 2d417a39e78bcd1a10049d16bed43931 81 Pfam PF00886 Ribosomal protein S16 9 67 1.6E-27 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1464 2d417a39e78bcd1a10049d16bed43931 81 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 4.8E-37 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1464 2d417a39e78bcd1a10049d16bed43931 81 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_1464 2d417a39e78bcd1a10049d16bed43931 81 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 25.68 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1464 2d417a39e78bcd1a10049d16bed43931 81 Gene3D G3DSA:3.30.1320.10 1 81 1.8E-37 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1464 2d417a39e78bcd1a10049d16bed43931 81 SUPERFAMILY SSF54565 2 80 6.54E-34 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2032 4907da7065baf2ae8eeb4e99a6d88573 1084 Gene3D G3DSA:3.40.50.300 812 949 4.2E-10 T 11-10-2018 Clos_2032 4907da7065baf2ae8eeb4e99a6d88573 1084 SMART SM00490 836 915 4.8E-5 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_2032 4907da7065baf2ae8eeb4e99a6d88573 1084 SUPERFAMILY SSF52540 459 926 3.31E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2032 4907da7065baf2ae8eeb4e99a6d88573 1084 Pfam PF00271 Helicase conserved C-terminal domain 844 914 5.1E-7 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_2206 0b615e121095e219010d57a0b4b2ce9d 246 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 121 2.0E-5 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Clos_2206 0b615e121095e219010d57a0b4b2ce9d 246 SUPERFAMILY SSF56042 135 245 1.81E-5 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Clos_2206 0b615e121095e219010d57a0b4b2ce9d 246 SUPERFAMILY SSF55326 9 125 4.54E-7 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Clos_2206 0b615e121095e219010d57a0b4b2ce9d 246 Gene3D G3DSA:3.30.1330.10 4 126 4.5E-11 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Clos_0206 f966efd8b7f849e933895ecadf78315e 243 Gene3D G3DSA:1.10.3480.10 5 240 1.5E-30 T 11-10-2018 Clos_0206 f966efd8b7f849e933895ecadf78315e 243 SUPERFAMILY SSF89155 10 240 3.66E-28 T 11-10-2018 IPR036411 TorD-like superfamily Clos_0206 f966efd8b7f849e933895ecadf78315e 243 Pfam PF02613 Nitrate reductase delta subunit 64 208 8.3E-18 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Clos_2260 dea3c5bad2cc989875be90bef57cf059 376 Gene3D G3DSA:1.20.5.340 7 111 2.5E-6 T 11-10-2018 Clos_2260 dea3c5bad2cc989875be90bef57cf059 376 SUPERFAMILY SSF51261 155 373 7.32E-60 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_2260 dea3c5bad2cc989875be90bef57cf059 376 Pfam PF01551 Peptidase family M23 275 369 5.9E-35 T 11-10-2018 IPR016047 Peptidase M23 Clos_2260 dea3c5bad2cc989875be90bef57cf059 376 Gene3D G3DSA:2.70.70.10 215 375 9.1E-54 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_1009 869b6f9ddeca7798cc43692dd586a131 261 SUPERFAMILY SSF56317 1 260 3.53E-75 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Clos_1009 869b6f9ddeca7798cc43692dd586a131 261 Pfam PF00795 Carbon-nitrogen hydrolase 3 245 1.2E-50 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Clos_1009 869b6f9ddeca7798cc43692dd586a131 261 Gene3D G3DSA:3.60.110.10 1 260 4.2E-87 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Clos_2579 2437382359ca39969e4e867f07aa5fd2 245 Pfam PF02535 ZIP Zinc transporter 100 241 4.3E-21 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Clos_2771 dbbf21815189c0c7cd28abbb4c123c77 443 Gene3D G3DSA:2.30.40.10 48 119 9.5E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_2771 dbbf21815189c0c7cd28abbb4c123c77 443 SUPERFAMILY SSF51338 47 413 2.62E-18 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_2771 dbbf21815189c0c7cd28abbb4c123c77 443 Gene3D G3DSA:3.20.20.140 120 386 1.0E-53 T 11-10-2018 Clos_2771 dbbf21815189c0c7cd28abbb4c123c77 443 SUPERFAMILY SSF51556 113 391 2.47E-47 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_2771 dbbf21815189c0c7cd28abbb4c123c77 443 Pfam PF01979 Amidohydrolase family 110 426 4.5E-22 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Clos_0616 8cf51be5dbf91e6ca7d211361967de00 356 SMART SM00267 185 356 6.9E-53 T 11-10-2018 IPR000160 GGDEF domain Clos_0616 8cf51be5dbf91e6ca7d211361967de00 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 193 355 3.4E-53 T 11-10-2018 IPR000160 GGDEF domain Clos_0616 8cf51be5dbf91e6ca7d211361967de00 356 Gene3D G3DSA:3.30.70.270 188 356 1.4E-54 T 11-10-2018 Clos_0616 8cf51be5dbf91e6ca7d211361967de00 356 Pfam PF07694 5TMR of 5TMR-LYT 22 184 1.5E-12 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 Clos_0616 8cf51be5dbf91e6ca7d211361967de00 356 SUPERFAMILY SSF55073 201 355 3.22E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_0616 8cf51be5dbf91e6ca7d211361967de00 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 196 353 1.2E-44 T 11-10-2018 IPR000160 GGDEF domain Clos_2758 e310af0d91a46577f56c7823c0947a87 304 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 2 284 1.4E-85 T 11-10-2018 IPR003797 DegV Clos_2758 e310af0d91a46577f56c7823c0947a87 304 Gene3D G3DSA:3.40.50.10170 1 154 1.4E-49 T 11-10-2018 Clos_2758 e310af0d91a46577f56c7823c0947a87 304 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 286 5.9E-74 T 11-10-2018 IPR003797 DegV Clos_2758 e310af0d91a46577f56c7823c0947a87 304 Gene3D G3DSA:3.30.1180.10 159 289 6.8E-30 T 11-10-2018 Clos_2758 e310af0d91a46577f56c7823c0947a87 304 SUPERFAMILY SSF82549 2 287 6.02E-78 T 11-10-2018 Clos_1130 bf5e5a68c2c31e6e211202fe654185a1 120 Gene3D G3DSA:3.30.1380.10 9 119 6.7E-28 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Clos_1130 bf5e5a68c2c31e6e211202fe654185a1 120 SUPERFAMILY SSF55166 9 113 3.34E-32 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Clos_1130 bf5e5a68c2c31e6e211202fe654185a1 120 Pfam PF08291 Peptidase M15 8 108 1.4E-25 T 11-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 Clos_2805 2707fb54d202d78966a48c49ccd1d2f1 137 SUPERFAMILY SSF47188 2 132 3.14E-31 T 11-10-2018 IPR035938 Hemerythrin-like superfamily Clos_2805 2707fb54d202d78966a48c49ccd1d2f1 137 Pfam PF01814 Hemerythrin HHE cation binding domain 12 126 7.8E-13 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Clos_2805 2707fb54d202d78966a48c49ccd1d2f1 137 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 131 7.5E-32 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 Clos_2805 2707fb54d202d78966a48c49ccd1d2f1 137 Gene3D G3DSA:1.20.120.50 1 136 2.0E-35 T 11-10-2018 IPR035938 Hemerythrin-like superfamily Clos_2805 2707fb54d202d78966a48c49ccd1d2f1 137 ProSitePatterns PS00550 Hemerythrin family signature. 60 83 - T 11-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 Clos_0047 1d6c0cb5fc4f234f5a053a6beeeb7907 160 PIRSF PIRSF031501 1 159 3.6E-40 T 11-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 Clos_0047 1d6c0cb5fc4f234f5a053a6beeeb7907 160 Pfam PF06177 QueT transporter 9 154 5.8E-46 T 11-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 2 247 6.1E-99 T 11-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 SUPERFAMILY SSF52540 2 247 5.0E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 ProSitePatterns PS00746 NifH/frxC family signature 1. 84 96 - T 11-10-2018 IPR030655 NifH/chlL conserved site Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 PRINTS PR00091 Nitrogenase component II signature 122 137 1.4E-34 T 11-10-2018 Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 PRINTS PR00091 Nitrogenase component II signature 82 96 1.4E-34 T 11-10-2018 Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 PRINTS PR00091 Nitrogenase component II signature 7 20 1.4E-34 T 11-10-2018 Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 PRINTS PR00091 Nitrogenase component II signature 29 44 1.4E-34 T 11-10-2018 Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 Gene3D G3DSA:3.40.50.300 1 248 1.1E-63 T 11-10-2018 Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 PIRSF PIRSF000363 1 248 3.6E-104 T 11-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Clos_0309 c54d4a32c59cc0159b1868300f7f1612 248 ProSitePatterns PS00692 NifH/frxC family signature 2. 123 136 - T 11-10-2018 IPR030655 NifH/chlL conserved site Clos_1604 d74064a644425feb45ba560b55db00c1 570 SUPERFAMILY SSF52540 1 525 1.16E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1604 d74064a644425feb45ba560b55db00c1 570 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 562 1.5E-167 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Clos_1604 d74064a644425feb45ba560b55db00c1 570 Gene3D G3DSA:3.40.50.300 1 267 5.9E-47 T 11-10-2018 Clos_1604 d74064a644425feb45ba560b55db00c1 570 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 521 8.7E-20 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Clos_1604 d74064a644425feb45ba560b55db00c1 570 PIRSF PIRSF003128 1 567 2.1E-171 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Clos_1604 d74064a644425feb45ba560b55db00c1 570 Gene3D G3DSA:3.40.50.300 280 563 3.6E-48 T 11-10-2018 Clos_0698 7e488d9379df969cf11b049afe2cb795 359 PIRSF PIRSF026508 2 359 1.5E-119 T 11-10-2018 IPR008863 Toxic anion resistance Clos_0698 7e488d9379df969cf11b049afe2cb795 359 Pfam PF05816 Toxic anion resistance protein (TelA) 32 358 9.9E-109 T 11-10-2018 IPR008863 Toxic anion resistance Clos_1623 f5d3342ec40778bfb16c0004a24880ed 144 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 94 126 8.4E-6 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative Clos_2346 9dcfe556e0a609764b93ed80728a4b24 194 Gene3D G3DSA:3.20.20.370 1 189 2.1E-53 T 11-10-2018 Clos_2346 9dcfe556e0a609764b93ed80728a4b24 194 Pfam PF01522 Polysaccharide deacetylase 2 91 1.1E-21 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Clos_2346 9dcfe556e0a609764b93ed80728a4b24 194 SUPERFAMILY SSF88713 2 184 1.68E-40 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Clos_2416 d85c78b6fb2b833cfdb1fc97f7456d8d 406 Gene3D G3DSA:2.170.120.30 314 405 3.5E-11 T 11-10-2018 Clos_2416 d85c78b6fb2b833cfdb1fc97f7456d8d 406 Pfam PF07949 YbbR-like protein 41 123 2.4E-8 T 11-10-2018 IPR012505 YbbR-like Clos_2416 d85c78b6fb2b833cfdb1fc97f7456d8d 406 Pfam PF07949 YbbR-like protein 324 402 1.6E-5 T 11-10-2018 IPR012505 YbbR-like Clos_2416 d85c78b6fb2b833cfdb1fc97f7456d8d 406 Pfam PF07949 YbbR-like protein 224 304 2.6E-6 T 11-10-2018 IPR012505 YbbR-like Clos_2416 d85c78b6fb2b833cfdb1fc97f7456d8d 406 Pfam PF07949 YbbR-like protein 134 202 3.2E-7 T 11-10-2018 IPR012505 YbbR-like Clos_2416 d85c78b6fb2b833cfdb1fc97f7456d8d 406 Gene3D G3DSA:2.170.120.40 221 306 1.4E-9 T 11-10-2018 Clos_2416 d85c78b6fb2b833cfdb1fc97f7456d8d 406 Gene3D G3DSA:2.170.120.40 133 219 1.4E-7 T 11-10-2018 Clos_2416 d85c78b6fb2b833cfdb1fc97f7456d8d 406 Gene3D G3DSA:2.170.120.30 28 132 7.1E-18 T 11-10-2018 Clos_0664 b25e93dd12baf7d5ee4b136a9abe8030 427 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 427 220.869 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 Clos_0664 b25e93dd12baf7d5ee4b136a9abe8030 427 SUPERFAMILY SSF53686 42 412 4.19E-57 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Clos_0664 b25e93dd12baf7d5ee4b136a9abe8030 427 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 7 417 5.8E-190 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 Clos_0664 b25e93dd12baf7d5ee4b136a9abe8030 427 Gene3D G3DSA:3.40.50.1100 107 229 1.9E-183 T 11-10-2018 Clos_0664 b25e93dd12baf7d5ee4b136a9abe8030 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 88 396 9.9E-53 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Clos_0664 b25e93dd12baf7d5ee4b136a9abe8030 427 Gene3D G3DSA:3.40.50.1100 16 417 1.9E-183 T 11-10-2018 Clos_1277 ab7f4d5a32e75a2dcec2dfbe6ff41adb 334 SUPERFAMILY SSF109604 28 333 3.14E-74 T 11-10-2018 Clos_1277 ab7f4d5a32e75a2dcec2dfbe6ff41adb 334 Gene3D G3DSA:1.10.3210.10 3 331 9.2E-99 T 11-10-2018 Clos_1277 ab7f4d5a32e75a2dcec2dfbe6ff41adb 334 SMART SM00471 72 195 3.4E-10 T 11-10-2018 IPR003607 HD/PDEase domain Clos_1277 ab7f4d5a32e75a2dcec2dfbe6ff41adb 334 Pfam PF13286 Phosphohydrolase-associated domain 245 329 4.4E-20 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain Clos_1277 ab7f4d5a32e75a2dcec2dfbe6ff41adb 334 Pfam PF01966 HD domain 76 184 2.6E-14 T 11-10-2018 IPR006674 HD domain Clos_2726 c3eb6b2c7eb53f83da50ae2d74bc6e5a 149 SUPERFAMILY SSF55136 1 149 3.84E-28 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_2726 c3eb6b2c7eb53f83da50ae2d74bc6e5a 149 Gene3D G3DSA:3.20.80.10 1 149 1.9E-38 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_2726 c3eb6b2c7eb53f83da50ae2d74bc6e5a 149 SMART SM00871 1 149 5.1E-30 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding Clos_2726 c3eb6b2c7eb53f83da50ae2d74bc6e5a 149 Pfam PF14526 Integron-associated effector binding protein 8 148 6.7E-37 T 11-10-2018 IPR029441 Integron-associated effector binding protein Clos_0262 c83c6c5b6e11a169ee081e002a9b09d6 156 Pfam PF01799 [2Fe-2S] binding domain 80 149 4.8E-24 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Clos_0262 c83c6c5b6e11a169ee081e002a9b09d6 156 Gene3D G3DSA:1.10.150.120 83 156 3.1E-24 T 11-10-2018 Clos_0262 c83c6c5b6e11a169ee081e002a9b09d6 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 63 2.3E-7 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Clos_0262 c83c6c5b6e11a169ee081e002a9b09d6 156 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 46 54 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Clos_0262 c83c6c5b6e11a169ee081e002a9b09d6 156 SUPERFAMILY SSF47741 80 153 5.1E-26 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Clos_0262 c83c6c5b6e11a169ee081e002a9b09d6 156 SUPERFAMILY SSF54292 10 85 3.28E-22 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Clos_0262 c83c6c5b6e11a169ee081e002a9b09d6 156 Gene3D G3DSA:3.10.20.30 7 82 4.8E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Clos_0562 f616f44245501c904c95f13046301fb5 200 Gene3D G3DSA:3.90.1680.10 1 197 1.5E-46 T 11-10-2018 IPR036590 SOS response associated peptidase-like Clos_0562 f616f44245501c904c95f13046301fb5 200 Pfam PF02586 SOS response associated peptidase (SRAP) 2 180 2.0E-40 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) Clos_0562 f616f44245501c904c95f13046301fb5 200 SUPERFAMILY SSF143081 2 180 1.02E-45 T 11-10-2018 IPR036590 SOS response associated peptidase-like Clos_1985 ef2e5e93e88ec0e758137122cb495ee5 421 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 71 280 2.8E-42 T 11-10-2018 IPR000477 Reverse transcriptase domain Clos_1985 ef2e5e93e88ec0e758137122cb495ee5 421 SUPERFAMILY SSF56672 24 350 3.21E-49 T 11-10-2018 Clos_1985 ef2e5e93e88ec0e758137122cb495ee5 421 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 14 357 5.1E-128 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Clos_1985 ef2e5e93e88ec0e758137122cb495ee5 421 Pfam PF08388 Group II intron, maturase-specific domain 293 368 5.1E-21 T 11-10-2018 IPR013597 Group II intron, maturase-specific Clos_1282 fdae3e7a80c9923d5c7b49ccf53659af 372 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 351 1.6E-88 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Clos_1282 fdae3e7a80c9923d5c7b49ccf53659af 372 PIRSF PIRSF037489 1 372 9.5E-145 T 11-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria Clos_1282 fdae3e7a80c9923d5c7b49ccf53659af 372 SUPERFAMILY SSF102705 4 371 5.76E-133 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Clos_1282 fdae3e7a80c9923d5c7b49ccf53659af 372 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 367 5.9E-68 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Clos_1282 fdae3e7a80c9923d5c7b49ccf53659af 372 Gene3D G3DSA:3.40.1390.30 2 127 4.2E-42 T 11-10-2018 Clos_1282 fdae3e7a80c9923d5c7b49ccf53659af 372 Gene3D G3DSA:3.30.70.120 131 239 2.7E-44 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clos_2732 f3030bd07542033b839268e10126fa21 144 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 2.0E-16 T 11-10-2018 Clos_2732 f3030bd07542033b839268e10126fa21 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.0E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Clos_2732 f3030bd07542033b839268e10126fa21 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.0E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Clos_2732 f3030bd07542033b839268e10126fa21 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.0E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Clos_2732 f3030bd07542033b839268e10126fa21 144 SMART SM00344 1 107 5.6E-30 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Clos_2732 f3030bd07542033b839268e10126fa21 144 SUPERFAMILY SSF46785 1 61 5.54E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2732 f3030bd07542033b839268e10126fa21 144 Pfam PF01037 Lrp/AsnC ligand binding domain 77 133 1.1E-8 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Clos_2732 f3030bd07542033b839268e10126fa21 144 Gene3D G3DSA:3.30.70.920 51 135 7.1E-15 T 11-10-2018 Clos_2732 f3030bd07542033b839268e10126fa21 144 Gene3D G3DSA:1.10.10.10 1 50 1.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2732 f3030bd07542033b839268e10126fa21 144 SUPERFAMILY SSF54909 63 135 5.9E-11 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Clos_0836 2484f186556da0598a890e480dffeb0b 467 PIRSF PIRSF016636 1 467 2.8E-133 T 11-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB Clos_0836 2484f186556da0598a890e480dffeb0b 467 PIRSF PIRSF500217 1 467 6.5E-137 T 11-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 Clos_0836 2484f186556da0598a890e480dffeb0b 467 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 145 369 1.4E-27 T 11-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT Clos_2682 db01789f9b1d92793a4dd8dcc55a1c32 221 Gene3D G3DSA:1.10.3720.10 1 218 6.6E-48 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2682 db01789f9b1d92793a4dd8dcc55a1c32 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 1.9E-28 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Clos_2682 db01789f9b1d92793a4dd8dcc55a1c32 221 SUPERFAMILY SSF161098 14 200 3.79E-39 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2682 db01789f9b1d92793a4dd8dcc55a1c32 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 1.4E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2009 d68a37d2b6753d82b999dfe22f4dad6f 558 SMART SM00382 292 453 0.0041 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2009 d68a37d2b6753d82b999dfe22f4dad6f 558 SUPERFAMILY SSF52540 289 491 9.92E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2009 d68a37d2b6753d82b999dfe22f4dad6f 558 SUPERFAMILY SSF55186 75 242 4.97E-30 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Clos_2009 d68a37d2b6753d82b999dfe22f4dad6f 558 Gene3D G3DSA:3.40.50.300 230 503 1.5E-61 T 11-10-2018 Clos_2009 d68a37d2b6753d82b999dfe22f4dad6f 558 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 296 493 1.7E-13 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Clos_2009 d68a37d2b6753d82b999dfe22f4dad6f 558 Gene3D G3DSA:3.30.980.10 75 220 2.8E-24 T 11-10-2018 Clos_0445 aea30443fe5d48156c49b7770116668e 169 Gene3D G3DSA:1.10.1760.20 5 168 1.0E-40 T 11-10-2018 Clos_0445 aea30443fe5d48156c49b7770116668e 169 Pfam PF12822 ECF transporter, substrate-specific component 10 160 1.8E-22 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Clos_1481 0ce586d7db7d7254564408134792a7de 269 Pfam PF02108 Flagellar assembly protein FliH 139 258 3.2E-16 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Clos_2506 f79d3182836df85739d8a514a4c57bcd 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Clos_2506 f79d3182836df85739d8a514a4c57bcd 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 2.9E-17 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Clos_2506 f79d3182836df85739d8a514a4c57bcd 128 SUPERFAMILY SSF54593 3 126 3.09E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Clos_2506 f79d3182836df85739d8a514a4c57bcd 128 Gene3D G3DSA:3.10.180.10 1 126 6.5E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Clos_2706 3216ba1a3619ab6e2caa2e58fbd652ec 307 SUPERFAMILY SSF103481 46 148 2.35E-13 T 11-10-2018 Clos_2706 3216ba1a3619ab6e2caa2e58fbd652ec 307 SUPERFAMILY SSF103481 222 300 1.7E-10 T 11-10-2018 Clos_2706 3216ba1a3619ab6e2caa2e58fbd652ec 307 Pfam PF00892 EamA-like transporter family 17 145 1.2E-24 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_2706 3216ba1a3619ab6e2caa2e58fbd652ec 307 Pfam PF00892 EamA-like transporter family 158 300 1.1E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_2441 32570da722dac9f34c8930beef021fe3 658 Pfam PF00474 Sodium:solute symporter family 34 434 1.5E-26 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Clos_2441 32570da722dac9f34c8930beef021fe3 658 SUPERFAMILY SSF46785 485 607 7.61E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2441 32570da722dac9f34c8930beef021fe3 658 Gene3D G3DSA:1.20.1730.10 22 513 6.8E-65 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Clos_2526 5468f912be2019979fa453d4cc9af492 748 Gene3D G3DSA:3.40.50.300 313 736 2.4E-150 T 11-10-2018 Clos_2526 5468f912be2019979fa453d4cc9af492 748 SUPERFAMILY SSF47781 81 147 8.23E-12 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_2526 5468f912be2019979fa453d4cc9af492 748 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 12 736 3.1E-216 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Clos_2526 5468f912be2019979fa453d4cc9af492 748 Pfam PF14490 Helix-hairpin-helix containing domain 146 236 4.6E-33 T 11-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain Clos_2526 5468f912be2019979fa453d4cc9af492 748 Pfam PF13538 UvrD-like helicase C-terminal domain 667 714 6.5E-19 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain Clos_2526 5468f912be2019979fa453d4cc9af492 748 Gene3D G3DSA:2.30.30.940 578 667 2.4E-150 T 11-10-2018 Clos_2526 5468f912be2019979fa453d4cc9af492 748 SMART SM00382 340 483 1.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2526 5468f912be2019979fa453d4cc9af492 748 SMART SM00278 89 110 180.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_2526 5468f912be2019979fa453d4cc9af492 748 SMART SM00278 124 143 0.4 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_2526 5468f912be2019979fa453d4cc9af492 748 SMART SM00278 188 207 16.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Clos_2526 5468f912be2019979fa453d4cc9af492 748 Gene3D G3DSA:3.40.50.300 489 730 2.4E-150 T 11-10-2018 Clos_2526 5468f912be2019979fa453d4cc9af492 748 Pfam PF14520 Helix-hairpin-helix domain 96 144 5.8E-8 T 11-10-2018 Clos_2526 5468f912be2019979fa453d4cc9af492 748 SUPERFAMILY SSF52540 327 719 1.81E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2526 5468f912be2019979fa453d4cc9af492 748 Pfam PF13604 AAA domain 327 509 7.4E-44 T 11-10-2018 Clos_2526 5468f912be2019979fa453d4cc9af492 748 Gene3D G3DSA:1.10.150.20 77 148 1.3E-12 T 11-10-2018 Clos_2526 5468f912be2019979fa453d4cc9af492 748 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 9 743 28.589 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 Clos_2526 5468f912be2019979fa453d4cc9af492 748 Gene3D G3DSA:1.10.10.2220 189 285 3.0E-15 T 11-10-2018 Clos_0688 c9933897c789a29a3bc38d9289d29612 476 SUPERFAMILY SSF51445 140 404 1.18E-24 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Clos_0688 c9933897c789a29a3bc38d9289d29612 476 Pfam PF02638 Glycosyl hydrolase-like 10 112 424 3.4E-93 T 11-10-2018 IPR003790 Glycosyl hydrolase-like 10 Clos_0688 c9933897c789a29a3bc38d9289d29612 476 Gene3D G3DSA:3.20.20.70 170 327 3.6E-9 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 SUPERFAMILY SSF53623 98 315 1.28E-63 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 400 9.4E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 Gene3D G3DSA:3.40.1190.10 100 314 2.8E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 Gene3D G3DSA:3.90.190.20 315 465 3.4E-59 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 Pfam PF01225 Mur ligase family, catalytic domain 13 111 2.9E-27 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 Gene3D G3DSA:3.40.50.720 12 99 4.9E-34 T 11-10-2018 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 13 459 8.2E-151 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 SUPERFAMILY SSF53244 316 461 3.66E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 SUPERFAMILY SSF51984 12 98 1.57E-29 T 11-10-2018 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 Pfam PF08245 Mur ligase middle domain 117 297 3.1E-35 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Clos_2649 0fc9bd82ca7b16299c4ffdf8eaee4d50 465 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 11 465 40.469 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Clos_1723 a03607f137b8b81147dec0aa114df73b 341 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 1.8E-147 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Clos_1723 a03607f137b8b81147dec0aa114df73b 341 SUPERFAMILY SSF111337 1 340 4.45E-145 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Clos_1723 a03607f137b8b81147dec0aa114df73b 341 Pfam PF02547 Queuosine biosynthesis protein 4 340 2.2E-147 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Clos_1723 a03607f137b8b81147dec0aa114df73b 341 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 47.494 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Clos_1723 a03607f137b8b81147dec0aa114df73b 341 Gene3D G3DSA:3.40.1780.10 14 340 4.9E-136 T 11-10-2018 Clos_1723 a03607f137b8b81147dec0aa114df73b 341 Gene3D G3DSA:2.40.10.240 64 162 4.9E-136 T 11-10-2018 Clos_0658 d9c44f12a5e46cceb38b7c2cc51ccd33 605 SUPERFAMILY SSF55486 1 578 6.27E-102 T 11-10-2018 Clos_0658 d9c44f12a5e46cceb38b7c2cc51ccd33 605 Gene3D G3DSA:1.20.140.70 25 175 2.0E-24 T 11-10-2018 Clos_0658 d9c44f12a5e46cceb38b7c2cc51ccd33 605 Gene3D G3DSA:1.10.1370.20 226 605 9.5E-114 T 11-10-2018 Clos_0658 d9c44f12a5e46cceb38b7c2cc51ccd33 605 Pfam PF08439 Oligopeptidase F 115 181 1.7E-14 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain Clos_0658 d9c44f12a5e46cceb38b7c2cc51ccd33 605 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 8 594 1.1E-185 T 11-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 Clos_0658 d9c44f12a5e46cceb38b7c2cc51ccd33 605 Pfam PF01432 Peptidase family M3 204 583 3.8E-38 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 5.5E-55 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 5.5E-55 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 5.5E-55 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 5.5E-55 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 5.5E-55 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 5.5E-55 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 5.5E-55 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 5.5E-55 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 2.0E-159 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 SUPERFAMILY SSF144052 5 410 5.75E-136 T 11-10-2018 Clos_0663 1f938bc616894b8ae41c12851438e2f6 410 Gene3D G3DSA:3.40.1830.10 1 180 3.2E-58 T 11-10-2018 IPR035097 Peptidase M29, N-terminal Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 Pfam PF00005 ABC transporter 305 429 5.0E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 ProSitePatterns PS00211 ABC transporters family signature. 98 112 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 Gene3D G3DSA:3.40.50.300 85 224 7.4E-28 T 11-10-2018 Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 SUPERFAMILY SSF52540 3 186 9.13E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 Pfam PF00005 ABC transporter 23 67 7.1E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 SMART SM00382 28 171 9.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 SMART SM00382 313 474 1.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 Gene3D G3DSA:3.40.50.300 2 84 6.4E-11 T 11-10-2018 Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 Gene3D G3DSA:3.40.50.300 251 506 1.8E-52 T 11-10-2018 Clos_0945 2cad925b24883d0acc2c6df60f8f1225 546 SUPERFAMILY SSF52540 280 490 2.02E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2585 dd67f438441840937e22053c5e367a69 248 SMART SM00382 26 209 1.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2585 dd67f438441840937e22053c5e367a69 248 Gene3D G3DSA:3.40.50.300 1 231 2.3E-75 T 11-10-2018 Clos_2585 dd67f438441840937e22053c5e367a69 248 Pfam PF00005 ABC transporter 18 160 4.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2585 dd67f438441840937e22053c5e367a69 248 SUPERFAMILY SSF52540 2 222 3.26E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2585 dd67f438441840937e22053c5e367a69 248 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 SUPERFAMILY SSF46934 1 55 3.4E-19 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 Pfam PF00889 Elongation factor TS 52 196 4.6E-44 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 Hamap MF_00050 Elongation factor Ts [tsf]. 1 214 57.575 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 Gene3D G3DSA:1.10.286.20 110 154 2.0E-59 T 11-10-2018 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 Gene3D G3DSA:3.30.479.20 59 195 2.0E-59 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 SUPERFAMILY SSF54713 59 214 1.44E-56 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 95 9.0E-39 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 91 214 1.7E-46 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Clos_1514 dc5ce4c4fb28fb1095a61aeda0462b4a 216 Gene3D G3DSA:1.10.8.10 1 55 3.1E-26 T 11-10-2018 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 Gene3D G3DSA:3.40.50.970 1 182 3.2E-57 T 11-10-2018 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 SUPERFAMILY SSF52518 3 224 1.18E-62 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 PIRSF PIRSF006439 1 593 1.0E-226 T 11-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 TIGRFAM TIGR03336 IOR_alpha: indolepyruvate ferredoxin oxidoreductase, alpha subunit 1 588 1.5E-210 T 11-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 Gene3D G3DSA:3.40.50.920 216 301 2.4E-6 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 SUPERFAMILY SSF54862 509 588 1.48E-13 T 11-10-2018 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 364 510 7.3E-27 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 573 584 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 SUPERFAMILY SSF52922 223 317 2.69E-7 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 Pfam PF13237 4Fe-4S dicluster domain 538 584 1.8E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 Gene3D G3DSA:3.30.70.20 535 592 1.8E-10 T 11-10-2018 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 SUPERFAMILY SSF52518 335 519 2.84E-30 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 Gene3D G3DSA:3.40.50.970 351 534 8.4E-20 T 11-10-2018 Clos_0049 6c4f786aa21801ec34f3db276a02f68c 593 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 14 180 1.3E-17 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Clos_2319 d4bdacdf65b7412d189241cba39b19e3 126 SMART SM01078 3 105 9.6E-29 T 11-10-2018 IPR014925 Uncharacterised domain CGGC-dom Clos_2319 d4bdacdf65b7412d189241cba39b19e3 126 Pfam PF08821 CGGC domain 3 105 9.0E-24 T 11-10-2018 IPR014925 Uncharacterised domain CGGC-dom Clos_0723 c348afd35bc4dff5596022b31517edcd 266 Gene3D G3DSA:1.10.3720.10 6 229 6.0E-58 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0723 c348afd35bc4dff5596022b31517edcd 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 228 4.4E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_0723 c348afd35bc4dff5596022b31517edcd 266 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 122 1.6E-21 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Clos_0723 c348afd35bc4dff5596022b31517edcd 266 SUPERFAMILY SSF161098 15 213 6.67E-44 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0587 96665d4df380483c67930a6f1d816ed3 246 SUPERFAMILY SSF46689 64 122 5.82E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0587 96665d4df380483c67930a6f1d816ed3 246 SUPERFAMILY SSF48498 176 243 4.89E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Clos_0587 96665d4df380483c67930a6f1d816ed3 246 Pfam PF00440 Bacterial regulatory proteins, tetR family 65 110 1.9E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0587 96665d4df380483c67930a6f1d816ed3 246 Gene3D G3DSA:1.10.357.10 55 244 1.2E-38 T 11-10-2018 Clos_0587 96665d4df380483c67930a6f1d816ed3 246 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 86 109 3.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0587 96665d4df380483c67930a6f1d816ed3 246 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 65 78 3.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0109 1f4e6ec48f525e6fc3b6ec5cd99e21ad 253 Pfam PF08241 Methyltransferase domain 54 140 2.8E-7 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Clos_0109 1f4e6ec48f525e6fc3b6ec5cd99e21ad 253 SUPERFAMILY SSF53335 28 202 8.68E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0109 1f4e6ec48f525e6fc3b6ec5cd99e21ad 253 Gene3D G3DSA:3.40.50.150 38 195 1.7E-13 T 11-10-2018 Clos_0522 787992d93c2258a9ad6dc2d2e9e4b120 113 SUPERFAMILY SSF64263 3 113 1.27E-47 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0522 787992d93c2258a9ad6dc2d2e9e4b120 113 Pfam PF01196 Ribosomal protein L17 17 113 8.4E-42 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0522 787992d93c2258a9ad6dc2d2e9e4b120 113 TIGRFAM TIGR00059 L17: ribosomal protein bL17 4 113 3.0E-48 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0522 787992d93c2258a9ad6dc2d2e9e4b120 113 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 2 113 29.037 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0522 787992d93c2258a9ad6dc2d2e9e4b120 113 Gene3D G3DSA:3.90.1030.10 1 113 4.7E-50 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0522 787992d93c2258a9ad6dc2d2e9e4b120 113 ProSitePatterns PS01167 Ribosomal protein L17 signature. 31 53 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_2097 2a856d2bb5d9005f152075066943f740 142 Pfam PF12732 YtxH-like protein 36 109 5.2E-12 T 11-10-2018 IPR024623 Uncharacterised protein family YtxH Clos_1530 1e7165778cca0393bdea1f61eb77beb9 320 SUPERFAMILY SSF64182 13 288 4.19E-65 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily Clos_1530 1e7165778cca0393bdea1f61eb77beb9 320 Gene3D G3DSA:3.10.310.30 197 319 1.7E-34 T 11-10-2018 Clos_1530 1e7165778cca0393bdea1f61eb77beb9 320 Pfam PF01368 DHH family 14 155 8.8E-17 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_1530 1e7165778cca0393bdea1f61eb77beb9 320 Pfam PF02272 DHHA1 domain 237 305 8.3E-13 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Clos_1530 1e7165778cca0393bdea1f61eb77beb9 320 Gene3D G3DSA:3.90.1640.10 1 195 1.4E-63 T 11-10-2018 Clos_0108 d87a8c844d47a7255eb736e909f7291b 266 Gene3D G3DSA:3.40.50.150 2 266 9.0E-53 T 11-10-2018 Clos_0108 d87a8c844d47a7255eb736e909f7291b 266 Pfam PF08241 Methyltransferase domain 45 146 7.0E-18 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Clos_0108 d87a8c844d47a7255eb736e909f7291b 266 SUPERFAMILY SSF53335 30 226 7.08E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1249 193342bbcd098df24b2c3e141b1d36e0 232 SUPERFAMILY SSF48317 48 230 2.49E-16 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Clos_1249 193342bbcd098df24b2c3e141b1d36e0 232 Gene3D G3DSA:1.10.3830.10 1 117 2.4E-35 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Clos_1249 193342bbcd098df24b2c3e141b1d36e0 232 Gene3D G3DSA:1.20.144.10 156 232 1.0E-10 T 11-10-2018 Clos_1249 193342bbcd098df24b2c3e141b1d36e0 232 SMART SM00014 131 228 5.5E-4 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Clos_1249 193342bbcd098df24b2c3e141b1d36e0 232 Pfam PF01569 PAP2 superfamily 159 230 4.9E-12 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Clos_1249 193342bbcd098df24b2c3e141b1d36e0 232 Pfam PF01219 Prokaryotic diacylglycerol kinase 11 112 8.8E-33 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Clos_1038 affe03e1f8eb5498f865921fa73621b4 285 Gene3D G3DSA:3.40.50.620 24 274 7.3E-47 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Clos_1038 affe03e1f8eb5498f865921fa73621b4 285 SUPERFAMILY SSF52402 32 232 2.87E-46 T 11-10-2018 Clos_1038 affe03e1f8eb5498f865921fa73621b4 285 PIRSF PIRSF004976 17 283 1.5E-67 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Clos_1038 affe03e1f8eb5498f865921fa73621b4 285 Pfam PF01171 PP-loop family 56 218 4.3E-18 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Clos_2194 9f13dadf33d8df6c43898762f70469f6 428 SUPERFAMILY SSF51556 55 367 6.09E-104 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_2194 9f13dadf33d8df6c43898762f70469f6 428 Gene3D G3DSA:2.30.40.10 9 421 1.5E-141 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_2194 9f13dadf33d8df6c43898762f70469f6 428 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 424 43.561 T 11-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Clos_2194 9f13dadf33d8df6c43898762f70469f6 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 424 1.3E-129 T 11-10-2018 Clos_2194 9f13dadf33d8df6c43898762f70469f6 428 Gene3D G3DSA:3.20.20.140 56 368 1.5E-141 T 11-10-2018 Clos_2194 9f13dadf33d8df6c43898762f70469f6 428 SUPERFAMILY SSF51338 1 426 3.36E-30 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_2194 9f13dadf33d8df6c43898762f70469f6 428 Pfam PF01979 Amidohydrolase family 51 421 9.1E-37 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Clos_2194 9f13dadf33d8df6c43898762f70469f6 428 ProSitePatterns PS00482 Dihydroorotase signature 1. 58 66 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Clos_2194 9f13dadf33d8df6c43898762f70469f6 428 ProSitePatterns PS00483 Dihydroorotase signature 2. 303 314 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 Gene3D G3DSA:1.20.1480.50 274 370 2.9E-7 T 11-10-2018 Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 SUPERFAMILY SSF103190 99 186 8.44E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 SMART SM00283 396 671 1.4E-53 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 SMART SM00304 612 668 72.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 SMART SM00304 309 367 5.3E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 Gene3D G3DSA:1.10.287.950 371 671 2.2E-59 T 11-10-2018 Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 Pfam PF02743 Cache domain 40 271 1.0E-23 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 Gene3D G3DSA:3.30.450.20 144 273 8.2E-22 T 11-10-2018 Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 466 624 6.8E-35 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0354 08a00e7a1c4b9ed4e8808ddac8c9b465 672 SUPERFAMILY SSF58104 339 670 5.75E-61 T 11-10-2018 Clos_0687 35c12c526e4758ec929038f3c8ffc560 163 Gene3D G3DSA:1.20.1260.10 2 150 1.8E-29 T 11-10-2018 IPR012347 Ferritin-like Clos_0687 35c12c526e4758ec929038f3c8ffc560 163 Pfam PF02915 Rubrerythrin 8 145 5.3E-17 T 11-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Clos_0687 35c12c526e4758ec929038f3c8ffc560 163 SUPERFAMILY SSF47240 4 155 2.01E-27 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_2425 81d3866085dafd77287764d502a0e85a 236 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 11 230 1.8E-80 T 11-10-2018 IPR019903 Repair of iron centres family Clos_2425 81d3866085dafd77287764d502a0e85a 236 Pfam PF04405 Domain of Unknown function (DUF542) 8 61 2.4E-22 T 11-10-2018 IPR019903 Repair of iron centres family Clos_2425 81d3866085dafd77287764d502a0e85a 236 Gene3D G3DSA:1.20.120.520 71 236 1.2E-20 T 11-10-2018 Clos_2425 81d3866085dafd77287764d502a0e85a 236 Pfam PF01814 Hemerythrin HHE cation binding domain 84 231 1.5E-22 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Clos_1628 c290bef634b9b7e08a7d47f4419334a9 140 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 18 2.7E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_1628 c290bef634b9b7e08a7d47f4419334a9 140 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 18 5.7E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_0340 fa73e5d30614ab7fd3694ac2322d6b26 327 SUPERFAMILY SSF56112 12 309 1.57E-44 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Clos_0340 fa73e5d30614ab7fd3694ac2322d6b26 327 Pfam PF01636 Phosphotransferase enzyme family 50 250 9.5E-18 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Clos_0340 fa73e5d30614ab7fd3694ac2322d6b26 327 Gene3D G3DSA:3.90.1200.10 115 318 6.1E-23 T 11-10-2018 Clos_1919 a87cf2ff2ec4cc0ab330426848d9c9c8 409 Gene3D G3DSA:3.40.1360.10 190 311 5.7E-7 T 11-10-2018 Clos_1919 a87cf2ff2ec4cc0ab330426848d9c9c8 409 SMART SM00400 44 87 0.0016 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Clos_1919 a87cf2ff2ec4cc0ab330426848d9c9c8 409 SUPERFAMILY SSF56731 127 301 5.36E-5 T 11-10-2018 Clos_1919 a87cf2ff2ec4cc0ab330426848d9c9c8 409 Pfam PF13154 Protein of unknown function (DUF3991) 124 197 3.5E-19 T 11-10-2018 IPR025054 Domain of unknown function DUF3991 Clos_1919 a87cf2ff2ec4cc0ab330426848d9c9c8 409 SUPERFAMILY SSF57783 7 88 6.46E-14 T 11-10-2018 Clos_1919 a87cf2ff2ec4cc0ab330426848d9c9c8 409 Pfam PF13155 Toprim-like 205 299 2.1E-19 T 11-10-2018 Clos_1919 a87cf2ff2ec4cc0ab330426848d9c9c8 409 Gene3D G3DSA:3.90.580.10 6 94 1.2E-7 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Clos_0035 032b443537998c72f9f9e34b016e2206 94 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 Clos_0035 032b443537998c72f9f9e34b016e2206 94 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.5E-28 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0035 032b443537998c72f9f9e34b016e2206 94 SUPERFAMILY SSF54995 1 94 4.32E-32 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0035 032b443537998c72f9f9e34b016e2206 94 Pfam PF01250 Ribosomal protein S6 3 91 1.5E-30 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0035 032b443537998c72f9f9e34b016e2206 94 Gene3D G3DSA:3.30.70.60 1 94 1.1E-33 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Clos_0035 032b443537998c72f9f9e34b016e2206 94 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.948 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Clos_1046 65812b795cecccd4b8d249772a4bdb25 369 Pfam PF00589 Phage integrase family 169 351 5.6E-27 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Clos_1046 65812b795cecccd4b8d249772a4bdb25 369 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 62 118 4.9E-17 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Clos_1046 65812b795cecccd4b8d249772a4bdb25 369 Gene3D G3DSA:1.10.150.130 56 164 2.3E-28 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Clos_1046 65812b795cecccd4b8d249772a4bdb25 369 Pfam PF14657 Arm DNA-binding domain 11 55 1.4E-14 T 11-10-2018 IPR028259 AP2-like integrase, N-terminal domain Clos_1046 65812b795cecccd4b8d249772a4bdb25 369 Gene3D G3DSA:1.10.443.10 165 366 1.5E-55 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Clos_1046 65812b795cecccd4b8d249772a4bdb25 369 SUPERFAMILY SSF56349 61 361 5.89E-74 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Clos_1587 112788f3a656fc71e5dd974bf930f18f 256 Hamap MF_01805 Segregation and condensation protein A [scpA]. 3 246 23.733 T 11-10-2018 IPR003768 Segregation and condensation protein A Clos_1587 112788f3a656fc71e5dd974bf930f18f 256 Pfam PF02616 Segregation and condensation protein ScpA 20 243 1.3E-39 T 11-10-2018 IPR003768 Segregation and condensation protein A Clos_0300 8228ef085a417aa40e7a9400ea32d219 433 SUPERFAMILY SSF55797 305 430 1.7E-22 T 11-10-2018 IPR035940 CAP superfamily Clos_0300 8228ef085a417aa40e7a9400ea32d219 433 Pfam PF14504 CAP-associated N-terminal 159 294 2.8E-41 T 11-10-2018 IPR029410 CAP-associated domain Clos_0300 8228ef085a417aa40e7a9400ea32d219 433 Gene3D G3DSA:3.40.33.10 132 431 4.2E-80 T 11-10-2018 IPR035940 CAP superfamily Clos_0300 8228ef085a417aa40e7a9400ea32d219 433 SUPERFAMILY SSF55383 55 139 5.62E-24 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_0300 8228ef085a417aa40e7a9400ea32d219 433 Gene3D G3DSA:3.30.457.10 56 129 3.4E-21 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_0300 8228ef085a417aa40e7a9400ea32d219 433 Pfam PF00188 Cysteine-rich secretory protein family 313 429 5.7E-18 T 11-10-2018 IPR014044 CAP domain Clos_0300 8228ef085a417aa40e7a9400ea32d219 433 Pfam PF07833 Copper amine oxidase N-terminal domain 53 143 1.0E-28 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Clos_0823 b37a97ca62a6f5066cdf2216b71a83f3 368 Gene3D G3DSA:3.60.21.10 147 342 4.7E-23 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_0823 b37a97ca62a6f5066cdf2216b71a83f3 368 SUPERFAMILY SSF56300 147 366 1.27E-32 T 11-10-2018 Clos_0823 b37a97ca62a6f5066cdf2216b71a83f3 368 Pfam PF00149 Calcineurin-like phosphoesterase 149 310 4.3E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Clos_1070 003d8e26969aa57d00a1bb5e4a5456ef 217 Pfam PF04191 Phospholipid methyltransferase 88 193 8.2E-11 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Clos_1070 003d8e26969aa57d00a1bb5e4a5456ef 217 Gene3D G3DSA:1.20.120.1630 8 206 2.2E-24 T 11-10-2018 Clos_2169 5a0d2a15e7382f5d848ea2ea9277933c 299 SUPERFAMILY SSF103481 40 139 5.89E-11 T 11-10-2018 Clos_2169 5a0d2a15e7382f5d848ea2ea9277933c 299 Pfam PF00892 EamA-like transporter family 6 136 2.4E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_2169 5a0d2a15e7382f5d848ea2ea9277933c 299 Pfam PF00892 EamA-like transporter family 145 277 6.4E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_2169 5a0d2a15e7382f5d848ea2ea9277933c 299 SUPERFAMILY SSF103481 188 279 2.09E-14 T 11-10-2018 Clos_2876 f55281f232a4e6e95d00a197147a2170 114 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 110 18.532 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Clos_2876 f55281f232a4e6e95d00a197147a2170 114 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 108 9.9E-26 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Clos_2876 f55281f232a4e6e95d00a197147a2170 114 Gene3D G3DSA:3.30.230.10 1 114 9.6E-33 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Clos_2876 f55281f232a4e6e95d00a197147a2170 114 Pfam PF00825 Ribonuclease P 1 107 4.9E-29 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Clos_2876 f55281f232a4e6e95d00a197147a2170 114 SUPERFAMILY SSF54211 1 110 2.38E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_2876 f55281f232a4e6e95d00a197147a2170 114 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 105 2.0E-33 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Clos_0968 0d383c0768b7bd6e0e66d33b0872b361 339 SUPERFAMILY SSF46785 19 84 7.12E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0968 0d383c0768b7bd6e0e66d33b0872b361 339 Pfam PF04198 Putative sugar-binding domain 92 336 1.3E-65 T 11-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Clos_0968 0d383c0768b7bd6e0e66d33b0872b361 339 Gene3D G3DSA:3.40.50.1360 90 337 8.4E-78 T 11-10-2018 Clos_0968 0d383c0768b7bd6e0e66d33b0872b361 339 Gene3D G3DSA:1.10.10.10 20 89 4.5E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0968 0d383c0768b7bd6e0e66d33b0872b361 339 SUPERFAMILY SSF100950 92 336 1.45E-64 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_0894 11b09354197e9791f109659bdefee275 245 SUPERFAMILY SSF54637 4 143 1.08E-34 T 11-10-2018 IPR029069 HotDog domain superfamily Clos_0894 11b09354197e9791f109659bdefee275 245 SUPERFAMILY SSF54637 154 241 2.56E-19 T 11-10-2018 IPR029069 HotDog domain superfamily Clos_0894 11b09354197e9791f109659bdefee275 245 Gene3D G3DSA:3.10.129.10 1 245 1.8E-63 T 11-10-2018 Clos_0894 11b09354197e9791f109659bdefee275 245 Pfam PF01643 Acyl-ACP thioesterase 3 242 7.7E-50 T 11-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 Clos_2156 5f9e9a6a918f84a714e2aceefadb8224 504 Pfam PF13181 Tetratricopeptide repeat 458 488 2.4E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_2156 5f9e9a6a918f84a714e2aceefadb8224 504 SMART SM00028 378 411 310.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_2156 5f9e9a6a918f84a714e2aceefadb8224 504 SMART SM00028 422 455 0.35 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_2156 5f9e9a6a918f84a714e2aceefadb8224 504 SMART SM00028 456 489 0.0027 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Clos_2156 5f9e9a6a918f84a714e2aceefadb8224 504 Gene3D G3DSA:1.10.4080.10 35 364 9.0E-39 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Clos_2156 5f9e9a6a918f84a714e2aceefadb8224 504 SUPERFAMILY SSF48452 367 499 2.11E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_2156 5f9e9a6a918f84a714e2aceefadb8224 504 Gene3D G3DSA:1.25.40.10 365 504 7.5E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_2156 5f9e9a6a918f84a714e2aceefadb8224 504 SUPERFAMILY SSF101478 38 353 1.83E-34 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Clos_2156 5f9e9a6a918f84a714e2aceefadb8224 504 Pfam PF03747 ADP-ribosylglycohydrolase 45 330 3.0E-30 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Clos_0221 480c0b267490fbcb30b05df60ea02065 227 SUPERFAMILY SSF52540 3 183 4.36E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0221 480c0b267490fbcb30b05df60ea02065 227 PIRSF PIRSF005624 1 197 3.7E-42 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Clos_0221 480c0b267490fbcb30b05df60ea02065 227 Gene3D G3DSA:3.40.50.300 1 192 1.1E-24 T 11-10-2018 Clos_0221 480c0b267490fbcb30b05df60ea02065 227 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 164 1.1E-10 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 SUPERFAMILY SSF53067 253 496 3.6E-91 T 11-10-2018 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 Gene3D G3DSA:3.30.420.40 1 252 1.4E-112 T 11-10-2018 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 61.658 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 PIRSF PIRSF000538 2 500 5.7E-192 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 Gene3D G3DSA:3.30.420.40 254 499 3.5E-95 T 11-10-2018 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 2.1E-90 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 495 2.2E-235 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 SUPERFAMILY SSF53067 3 254 1.0E-100 T 11-10-2018 Clos_1002 607ac98717adf331dc79e45fefb4e61c 504 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 449 3.3E-65 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Clos_0494 6baed9ce730834e5f17522c95031b9fb 96 SUPERFAMILY SSF54189 2 94 5.04E-32 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0494 6baed9ce730834e5f17522c95031b9fb 96 Pfam PF00276 Ribosomal protein L23 6 88 5.1E-34 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Clos_0494 6baed9ce730834e5f17522c95031b9fb 96 Gene3D G3DSA:3.30.70.330 1 96 1.0E-34 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Clos_0494 6baed9ce730834e5f17522c95031b9fb 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 21.66 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Clos_1023 62570940be462667e240e082281d2f11 217 Gene3D G3DSA:3.30.950.10 123 217 2.2E-9 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Clos_1023 62570940be462667e240e082281d2f11 217 SUPERFAMILY SSF53790 1 200 9.29E-40 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Clos_1023 62570940be462667e240e082281d2f11 217 Gene3D G3DSA:3.40.1010.10 1 121 3.5E-31 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Clos_1023 62570940be462667e240e082281d2f11 217 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 198 4.1E-39 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Clos_1023 62570940be462667e240e082281d2f11 217 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Clos_1023 62570940be462667e240e082281d2f11 217 PIRSF PIRSF036427 1 217 3.4E-51 T 11-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 Clos_0832 7b04fcd8134873d34f7b4bb81c128871 101 SUPERFAMILY SSF46785 8 97 8.84E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0832 7b04fcd8134873d34f7b4bb81c128871 101 Pfam PF01638 HxlR-like helix-turn-helix 16 99 9.6E-11 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type Clos_0832 7b04fcd8134873d34f7b4bb81c128871 101 Gene3D G3DSA:1.10.10.10 3 100 2.0E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2491 eac6cd41b0f6a9d0a695c29cf5e2bbc3 119 Pfam PF03646 FlaG protein 42 117 1.1E-24 T 11-10-2018 IPR005186 FlaG protein Clos_2491 eac6cd41b0f6a9d0a695c29cf5e2bbc3 119 Gene3D G3DSA:3.30.160.170 16 115 2.1E-25 T 11-10-2018 IPR035924 FlaG-like superfamily Clos_2491 eac6cd41b0f6a9d0a695c29cf5e2bbc3 119 SUPERFAMILY SSF160214 44 119 3.27E-25 T 11-10-2018 IPR035924 FlaG-like superfamily Clos_1825 cffb9810689f3e5ee62989781a94aed3 270 Gene3D G3DSA:3.40.50.300 79 261 7.9E-14 T 11-10-2018 Clos_1825 cffb9810689f3e5ee62989781a94aed3 270 SUPERFAMILY SSF52540 71 217 3.76E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0965 d70f110f4d4ce610107a8a1777bebf8b 369 Pfam PF02653 Branched-chain amino acid transport system / permease component 74 348 8.4E-39 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 107 123 8.9E-30 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 176 193 8.9E-30 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 300 318 8.9E-30 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 344 360 8.9E-30 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 438 453 8.9E-30 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 140 160 8.9E-30 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 43 471 6.4E-89 T 11-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 SUPERFAMILY SSF53187 20 472 2.18E-98 T 11-10-2018 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 Gene3D G3DSA:3.40.630.10 54 462 6.8E-146 T 11-10-2018 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 SUPERFAMILY SSF101821 119 250 4.39E-33 T 11-10-2018 Clos_1704 7cbb2d7c5b161838bdc38139e4912345 473 Gene3D G3DSA:2.30.250.10 118 255 6.8E-146 T 11-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 Clos_0817 00748157a886f3b1104774e245490249 180 Pfam PF08020 Protein of unknown function (DUF1706) 1 175 3.9E-57 T 11-10-2018 IPR012550 Protein of unknown function DUF1706 Clos_0817 00748157a886f3b1104774e245490249 180 PIRSF PIRSF031551 1 180 3.2E-64 T 11-10-2018 IPR012550 Protein of unknown function DUF1706 Clos_0817 00748157a886f3b1104774e245490249 180 Gene3D G3DSA:1.20.120.450 1 180 3.3E-57 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Clos_2597 4cd12891881e64c132d95fc0ef4551ee 269 Pfam PF05853 beta-keto acid cleavage enzyme 3 268 9.6E-109 T 11-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 Clos_2597 4cd12891881e64c132d95fc0ef4551ee 269 SUPERFAMILY SSF110395 32 115 5.75E-5 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Clos_2597 4cd12891881e64c132d95fc0ef4551ee 269 Gene3D G3DSA:3.20.20.70 1 269 1.9E-116 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0348 2be99e1a07b2aad3b47849c381b3f978 146 Pfam PF00583 Acetyltransferase (GNAT) family 36 123 4.4E-9 T 11-10-2018 IPR000182 GNAT domain Clos_0348 2be99e1a07b2aad3b47849c381b3f978 146 SUPERFAMILY SSF55729 8 145 5.14E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0348 2be99e1a07b2aad3b47849c381b3f978 146 Gene3D G3DSA:3.40.630.30 1 146 1.6E-34 T 11-10-2018 Clos_0473 6298777d4e26aa591dd02586b20ac937 250 SMART SM00967 5 80 4.5E-20 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Clos_0473 6298777d4e26aa591dd02586b20ac937 250 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.8E-84 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Clos_0473 6298777d4e26aa591dd02586b20ac937 250 SUPERFAMILY SSF75217 68 245 1.7E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Clos_0473 6298777d4e26aa591dd02586b20ac937 250 Gene3D G3DSA:3.30.1330.30 1 75 3.0E-15 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Clos_0473 6298777d4e26aa591dd02586b20ac937 250 SUPERFAMILY SSF55315 4 77 4.04E-19 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Clos_0473 6298777d4e26aa591dd02586b20ac937 250 Gene3D G3DSA:3.40.1280.10 76 244 3.3E-59 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clos_0473 6298777d4e26aa591dd02586b20ac937 250 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 79 4.9E-23 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Clos_0473 6298777d4e26aa591dd02586b20ac937 250 Pfam PF00588 SpoU rRNA Methylase family 97 237 7.4E-40 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Clos_2417 94169df38c7a77c6d43affb894458fe1 275 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 13 255 6.4E-81 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Clos_2417 94169df38c7a77c6d43affb894458fe1 275 Hamap MF_01499 Diadenylate cyclase [dacA]. 6 256 34.149 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Clos_2417 94169df38c7a77c6d43affb894458fe1 275 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 120 238 4.4E-44 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Clos_2417 94169df38c7a77c6d43affb894458fe1 275 PIRSF PIRSF004793 6 271 9.1E-93 T 11-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 Clos_2417 94169df38c7a77c6d43affb894458fe1 275 Gene3D G3DSA:3.40.1700.10 104 256 1.5E-59 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Clos_2417 94169df38c7a77c6d43affb894458fe1 275 SUPERFAMILY SSF143597 41 243 2.22E-67 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Clos_2578 41deaa0fda83b9879d4a3db36c766ad6 148 Pfam PF00498 FHA domain 71 135 4.4E-19 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Clos_2578 41deaa0fda83b9879d4a3db36c766ad6 148 Gene3D G3DSA:2.60.200.20 31 147 1.3E-25 T 11-10-2018 Clos_2578 41deaa0fda83b9879d4a3db36c766ad6 148 SMART SM00240 70 120 1.1E-13 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Clos_2578 41deaa0fda83b9879d4a3db36c766ad6 148 SUPERFAMILY SSF49879 39 142 1.74E-26 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Clos_0946 3b65e59be9e0b8804d3a10f36ad8c21d 279 Pfam PF02673 Bacitracin resistance protein BacA 10 265 2.6E-87 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Clos_0946 3b65e59be9e0b8804d3a10f36ad8c21d 279 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 263 1.3E-69 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Clos_0946 3b65e59be9e0b8804d3a10f36ad8c21d 279 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 270 17.813 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Clos_1774 d77cc6a20cbd5394a3564aec9ea1429f 313 Pfam PF03116 NQR2, RnfD, RnfE family 7 310 5.1E-116 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Clos_1774 d77cc6a20cbd5394a3564aec9ea1429f 313 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 5 312 24.391 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Clos_1774 d77cc6a20cbd5394a3564aec9ea1429f 313 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 10 311 1.1E-97 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Clos_0220 a5ac6e1b247aef8ae5e9bf8da6a5a3b9 380 Gene3D G3DSA:3.40.50.1980 51 184 1.2E-42 T 11-10-2018 Clos_0220 a5ac6e1b247aef8ae5e9bf8da6a5a3b9 380 Gene3D G3DSA:3.40.50.1980 214 322 2.8E-64 T 11-10-2018 Clos_0220 a5ac6e1b247aef8ae5e9bf8da6a5a3b9 380 SUPERFAMILY SSF53807 57 377 1.1E-57 T 11-10-2018 Clos_0220 a5ac6e1b247aef8ae5e9bf8da6a5a3b9 380 Gene3D G3DSA:1.20.58.2180 189 369 2.8E-64 T 11-10-2018 Clos_0220 a5ac6e1b247aef8ae5e9bf8da6a5a3b9 380 Pfam PF01497 Periplasmic binding protein 123 315 3.3E-24 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_0151 abbf6ee199bf6a45849640fbabf60cc9 96 Gene3D G3DSA:1.10.10.10 3 68 1.8E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0151 abbf6ee199bf6a45849640fbabf60cc9 96 SUPERFAMILY SSF46689 7 93 8.51E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0151 abbf6ee199bf6a45849640fbabf60cc9 96 Pfam PF01527 Transposase 6 76 1.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Clos_0737 abbf6ee199bf6a45849640fbabf60cc9 96 Gene3D G3DSA:1.10.10.10 3 68 1.8E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0737 abbf6ee199bf6a45849640fbabf60cc9 96 SUPERFAMILY SSF46689 7 93 8.51E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0737 abbf6ee199bf6a45849640fbabf60cc9 96 Pfam PF01527 Transposase 6 76 1.5E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Clos_2305 7e0c19befbd8740a913e6ccca9834ced 457 Pfam PF07670 Nucleoside recognition 144 240 2.3E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_2116 a42dc5df1703ce4fde317ba673afd655 140 SUPERFAMILY SSF53927 12 135 3.61E-27 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Clos_2116 a42dc5df1703ce4fde317ba673afd655 140 Pfam PF08973 Domain of unknown function (DUF1893) 8 135 1.3E-44 T 11-10-2018 IPR015067 Protein of unknown function DUF1893 Clos_2116 a42dc5df1703ce4fde317ba673afd655 140 Gene3D G3DSA:3.40.140.30 1 138 1.1E-42 T 11-10-2018 IPR037081 Hypothetical protein TM1506 Clos_1325 5fed888a1d60401cb56182692102e8e5 104 Gene3D G3DSA:3.30.950.10 17 103 9.5E-10 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Clos_2204 49d7be090c75d22cd470f1b7f14315b1 662 Gene3D G3DSA:1.10.287.950 357 661 5.8E-57 T 11-10-2018 Clos_2204 49d7be090c75d22cd470f1b7f14315b1 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 610 2.0E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2204 49d7be090c75d22cd470f1b7f14315b1 662 Gene3D G3DSA:1.10.8.500 302 356 4.8E-5 T 11-10-2018 Clos_2204 49d7be090c75d22cd470f1b7f14315b1 662 SUPERFAMILY SSF58104 332 661 4.19E-59 T 11-10-2018 Clos_2204 49d7be090c75d22cd470f1b7f14315b1 662 SMART SM00283 386 661 5.0E-51 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2204 49d7be090c75d22cd470f1b7f14315b1 662 Gene3D G3DSA:3.30.450.20 139 283 1.0E-22 T 11-10-2018 Clos_2204 49d7be090c75d22cd470f1b7f14315b1 662 Pfam PF02743 Cache domain 43 264 1.1E-21 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_1789 bac17b05174a65c80e89e39694b835b8 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 2.3E-47 T 11-10-2018 IPR014204 Sporulation stage V, protein AE Clos_1789 bac17b05174a65c80e89e39694b835b8 118 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 2 110 2.3E-37 T 11-10-2018 IPR005562 SpoVA Clos_0308 6c0365d115add73b0860afa58e6e71f5 166 Pfam PF12641 Flavodoxin domain 5 159 1.1E-56 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Clos_0308 6c0365d115add73b0860afa58e6e71f5 166 Gene3D G3DSA:3.40.50.360 2 129 2.2E-13 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_0308 6c0365d115add73b0860afa58e6e71f5 166 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Clos_0308 6c0365d115add73b0860afa58e6e71f5 166 SUPERFAMILY SSF52218 3 166 4.51E-17 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_1429 a4ff8cc45e41a3128ad19e573c2ddfb3 259 PIRSF PIRSF006594 10 257 4.3E-51 T 11-10-2018 IPR002829 Protein of unknown function DUF116 Clos_1429 a4ff8cc45e41a3128ad19e573c2ddfb3 259 Pfam PF01976 Protein of unknown function DUF116 99 251 9.4E-53 T 11-10-2018 IPR002829 Protein of unknown function DUF116 Clos_0347 bf21f166f3b30ad5767172b92af3185b 201 Pfam PF17428 Family of unknown function (DUF5412) 88 190 1.0E-9 T 11-10-2018 IPR035406 Protein of unknown function DUF5412 Clos_1537 669c9312920177098e70d918e4fe91cd 85 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 1.8E-27 T 11-10-2018 IPR014238 Sporulation protein YlmC/YmxH Clos_1537 669c9312920177098e70d918e4fe91cd 85 Pfam PF05239 PRC-barrel domain 1 81 7.6E-13 T 11-10-2018 IPR027275 PRC-barrel domain Clos_1537 669c9312920177098e70d918e4fe91cd 85 Gene3D G3DSA:2.30.30.240 1 80 4.1E-6 T 11-10-2018 Clos_1537 669c9312920177098e70d918e4fe91cd 85 SUPERFAMILY SSF50346 1 77 5.23E-13 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Clos_1450 9e3a1879570333ed4a85b520e451be3d 189 Gene3D G3DSA:1.10.10.10 2 64 2.7E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1450 9e3a1879570333ed4a85b520e451be3d 189 SUPERFAMILY SSF46785 9 56 9.65E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1450 9e3a1879570333ed4a85b520e451be3d 189 Pfam PF08220 DeoR-like helix-turn-helix domain 12 45 4.2E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Clos_1450 9e3a1879570333ed4a85b520e451be3d 189 Pfam PF03061 Thioesterase superfamily 127 171 4.5E-6 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Clos_1450 9e3a1879570333ed4a85b520e451be3d 189 SUPERFAMILY SSF54637 77 183 1.83E-24 T 11-10-2018 IPR029069 HotDog domain superfamily Clos_1450 9e3a1879570333ed4a85b520e451be3d 189 PIRSF PIRSF037733 4 189 2.4E-78 T 11-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 Clos_1450 9e3a1879570333ed4a85b520e451be3d 189 Gene3D G3DSA:3.10.129.10 80 188 2.0E-37 T 11-10-2018 Clos_0791 eb8f592c39c70a1ec2d36bc1893718f5 114 PIRSF PIRSF012296 1 114 4.6E-47 T 11-10-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 Clos_0791 eb8f592c39c70a1ec2d36bc1893718f5 114 SUPERFAMILY SSF143414 41 107 5.49E-14 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_0791 eb8f592c39c70a1ec2d36bc1893718f5 114 Gene3D G3DSA:3.30.70.1710 2 114 1.9E-44 T 11-10-2018 Clos_0791 eb8f592c39c70a1ec2d36bc1893718f5 114 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 42 94 0.006 T 11-10-2018 Clos_0791 eb8f592c39c70a1ec2d36bc1893718f5 114 SMART SM00877 42 114 2.6E-13 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0791 eb8f592c39c70a1ec2d36bc1893718f5 114 Pfam PF00936 BMC domain 43 100 2.8E-11 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2636 6f2d2c508f4d9de2b9cb1ebbb8086ea1 80 Pfam PF01479 S4 domain 1 47 5.6E-14 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_2636 6f2d2c508f4d9de2b9cb1ebbb8086ea1 80 PIRSF PIRSF038881 1 80 2.6E-30 T 11-10-2018 IPR025490 RNA-binding protein, HP1423 type Clos_2636 6f2d2c508f4d9de2b9cb1ebbb8086ea1 80 SMART SM00363 1 61 3.3E-14 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_2636 6f2d2c508f4d9de2b9cb1ebbb8086ea1 80 Gene3D G3DSA:3.10.290.10 1 79 6.8E-24 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_2636 6f2d2c508f4d9de2b9cb1ebbb8086ea1 80 SUPERFAMILY SSF55174 1 66 8.11E-21 T 11-10-2018 Clos_0303 f0b316e707d15e90e8d8dad848da6551 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 289 4.4E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_0303 f0b316e707d15e90e8d8dad848da6551 302 SUPERFAMILY SSF161098 83 284 4.97E-23 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0303 f0b316e707d15e90e8d8dad848da6551 302 Gene3D G3DSA:1.10.3720.10 79 293 2.1E-18 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2368 4982718259094496dd2f64b128bff403 165 SUPERFAMILY SSF55826 5 164 1.29E-38 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Clos_2368 4982718259094496dd2f64b128bff403 165 Gene3D G3DSA:3.90.960.10 2 165 1.7E-50 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Clos_2368 4982718259094496dd2f64b128bff403 165 Pfam PF04073 Aminoacyl-tRNA editing domain 24 150 1.9E-26 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Clos_0932 c35b404301db64fc464cd993a2af13a0 338 SUPERFAMILY SSF53850 47 277 9.32E-23 T 11-10-2018 Clos_0932 c35b404301db64fc464cd993a2af13a0 338 Gene3D G3DSA:3.40.190.10 123 232 5.0E-77 T 11-10-2018 Clos_0932 c35b404301db64fc464cd993a2af13a0 338 Pfam PF09084 NMT1/THI5 like 116 271 5.9E-12 T 11-10-2018 IPR015168 SsuA/THI5-like Clos_0932 c35b404301db64fc464cd993a2af13a0 338 Gene3D G3DSA:3.40.190.10 48 333 5.0E-77 T 11-10-2018 Clos_0932 c35b404301db64fc464cd993a2af13a0 338 PIRSF PIRSF027386 1 338 1.7E-116 T 11-10-2018 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type Clos_0816 d9621cfd119d2b97308c6bf932c79a85 299 Pfam PF13280 WYL domain 130 294 3.1E-33 T 11-10-2018 IPR026881 WYL domain Clos_0816 d9621cfd119d2b97308c6bf932c79a85 299 Gene3D G3DSA:1.10.10.10 1 59 3.7E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0816 d9621cfd119d2b97308c6bf932c79a85 299 SUPERFAMILY SSF46785 2 58 3.86E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0816 d9621cfd119d2b97308c6bf932c79a85 299 Pfam PF08279 HTH domain 5 56 8.1E-16 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Clos_0816 d9621cfd119d2b97308c6bf932c79a85 299 PIRSF PIRSF016838 1 299 1.8E-24 T 11-10-2018 IPR028349 Protein PafC Clos_1373 417c0dcaff0e3adff038954024013d07 722 SMART SM00740 662 721 4.5E-8 T 11-10-2018 IPR005543 PASTA domain Clos_1373 417c0dcaff0e3adff038954024013d07 722 SMART SM00740 593 658 1.5E-4 T 11-10-2018 IPR005543 PASTA domain Clos_1373 417c0dcaff0e3adff038954024013d07 722 SUPERFAMILY SSF56601 169 586 2.74E-106 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_1373 417c0dcaff0e3adff038954024013d07 722 SUPERFAMILY SSF54184 666 719 9.29E-10 T 11-10-2018 Clos_1373 417c0dcaff0e3adff038954024013d07 722 Pfam PF03793 PASTA domain 597 656 1.7E-6 T 11-10-2018 IPR005543 PASTA domain Clos_1373 417c0dcaff0e3adff038954024013d07 722 Pfam PF03793 PASTA domain 666 718 2.7E-9 T 11-10-2018 IPR005543 PASTA domain Clos_1373 417c0dcaff0e3adff038954024013d07 722 Pfam PF03717 Penicillin-binding Protein dimerisation domain 55 199 4.5E-18 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Clos_1373 417c0dcaff0e3adff038954024013d07 722 SUPERFAMILY SSF56519 51 217 2.09E-39 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Clos_1373 417c0dcaff0e3adff038954024013d07 722 Pfam PF00905 Penicillin binding protein transpeptidase domain 244 572 3.2E-85 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Clos_1373 417c0dcaff0e3adff038954024013d07 722 Gene3D G3DSA:3.30.10.20 664 719 1.3E-6 T 11-10-2018 Clos_1373 417c0dcaff0e3adff038954024013d07 722 Gene3D G3DSA:3.30.10.20 591 657 2.1E-7 T 11-10-2018 Clos_1373 417c0dcaff0e3adff038954024013d07 722 Gene3D G3DSA:3.90.1310.30 47 214 2.8E-43 T 11-10-2018 Clos_1373 417c0dcaff0e3adff038954024013d07 722 Gene3D G3DSA:3.40.710.10 215 585 1.6E-112 T 11-10-2018 Clos_1415 2d1745e72fdffae99a45a01a9049ccee 226 Gene3D G3DSA:1.20.120.910 1 127 1.7E-29 T 11-10-2018 Clos_1415 2d1745e72fdffae99a45a01a9049ccee 226 SUPERFAMILY SSF57716 90 120 1.92E-5 T 11-10-2018 Clos_1415 2d1745e72fdffae99a45a01a9049ccee 226 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 4 167 8.2E-49 T 11-10-2018 IPR014240 Regulatory protein, YteA family Clos_1415 2d1745e72fdffae99a45a01a9049ccee 226 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 88 120 6.8E-10 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Clos_1415 2d1745e72fdffae99a45a01a9049ccee 226 SUPERFAMILY SSF109635 2 89 4.97E-13 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily Clos_2429 e4ef8a454c63966c330a62db29b9f131 344 Pfam PF01032 FecCD transport family 31 336 4.6E-71 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_2429 e4ef8a454c63966c330a62db29b9f131 344 SUPERFAMILY SSF81345 13 336 1.44E-62 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2429 e4ef8a454c63966c330a62db29b9f131 344 Gene3D G3DSA:1.10.3470.10 17 341 5.5E-77 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0909 45cbcaf48c5c51bc472ba038fb662684 395 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 10 395 6.1E-181 T 11-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type Clos_0909 45cbcaf48c5c51bc472ba038fb662684 395 Pfam PF00155 Aminotransferase class I and II 42 384 1.8E-68 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_0909 45cbcaf48c5c51bc472ba038fb662684 395 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 2.6E-135 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Clos_0909 45cbcaf48c5c51bc472ba038fb662684 395 Gene3D G3DSA:3.40.640.10 58 293 2.6E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0909 45cbcaf48c5c51bc472ba038fb662684 395 SUPERFAMILY SSF53383 7 393 9.38E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_0909 45cbcaf48c5c51bc472ba038fb662684 395 Gene3D G3DSA:3.90.1150.10 38 386 2.6E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_0909 45cbcaf48c5c51bc472ba038fb662684 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Clos_0680 793bfc89393c7bc177252f27f5f4ec06 296 Gene3D G3DSA:3.30.1380.10 87 295 6.6E-81 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Clos_0680 793bfc89393c7bc177252f27f5f4ec06 296 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 147 276 4.0E-45 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 Clos_0680 793bfc89393c7bc177252f27f5f4ec06 296 SUPERFAMILY SSF55166 131 284 3.4E-39 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Clos_1716 026a3d613ba64ba3ac328abb44ee18dc 587 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 586 1.5E-156 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Clos_1716 026a3d613ba64ba3ac328abb44ee18dc 587 Gene3D G3DSA:3.90.1640.30 52 329 1.1E-93 T 11-10-2018 Clos_1716 026a3d613ba64ba3ac328abb44ee18dc 587 Gene3D G3DSA:3.10.310.30 331 452 1.6E-29 T 11-10-2018 Clos_1716 026a3d613ba64ba3ac328abb44ee18dc 587 Pfam PF01368 DHH family 78 225 7.8E-10 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_1716 026a3d613ba64ba3ac328abb44ee18dc 587 SUPERFAMILY SSF64182 52 449 2.35E-108 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily Clos_1716 026a3d613ba64ba3ac328abb44ee18dc 587 Pfam PF02272 DHHA1 domain 317 447 1.6E-18 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Clos_1650 7b6b062afc7b5ccdddf6083eb60d3d45 116 Gene3D G3DSA:1.20.5.1070 13 75 2.5E-5 T 11-10-2018 Clos_1650 7b6b062afc7b5ccdddf6083eb60d3d45 116 SUPERFAMILY SSF57997 15 114 7.19E-6 T 11-10-2018 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 Gene3D G3DSA:3.40.50.300 245 431 5.1E-65 T 11-10-2018 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 346 361 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 SMART SM00091 127 195 5.0E-4 T 11-10-2018 IPR000014 PAS domain Clos_2415 e1545f014e143f1e795d459fc847f85c 580 SMART SM00091 9 75 3.3E-6 T 11-10-2018 IPR000014 PAS domain Clos_2415 e1545f014e143f1e795d459fc847f85c 580 Pfam PF00158 Sigma-54 interaction domain 259 427 1.3E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 116 3.3E-8 T 11-10-2018 IPR000014 PAS domain Clos_2415 e1545f014e143f1e795d459fc847f85c 580 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 124 240 1.6E-12 T 11-10-2018 IPR000014 PAS domain Clos_2415 e1545f014e143f1e795d459fc847f85c 580 Pfam PF00989 PAS fold 129 229 1.2E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 Pfam PF00989 PAS fold 10 109 5.1E-10 T 11-10-2018 IPR013767 PAS fold GO:0006355 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 SMART SM00382 279 423 1.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2415 e1545f014e143f1e795d459fc847f85c 580 Gene3D G3DSA:3.30.450.20 5 109 1.3E-21 T 11-10-2018 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 Gene3D G3DSA:3.30.450.20 114 231 1.1E-15 T 11-10-2018 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 Gene3D G3DSA:1.10.10.60 506 579 2.0E-17 T 11-10-2018 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 SUPERFAMILY SSF52540 258 505 8.79E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2415 e1545f014e143f1e795d459fc847f85c 580 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 542 559 4.8E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 559 579 4.8E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 283 296 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 SUPERFAMILY SSF55785 11 105 2.27E-13 T 11-10-2018 IPR035965 PAS domain superfamily Clos_2415 e1545f014e143f1e795d459fc847f85c 580 SUPERFAMILY SSF46689 525 578 5.38E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 Gene3D G3DSA:1.10.8.60 433 505 2.9E-17 T 11-10-2018 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 SUPERFAMILY SSF55785 121 227 1.92E-12 T 11-10-2018 IPR035965 PAS domain superfamily Clos_2415 e1545f014e143f1e795d459fc847f85c 580 Pfam PF02954 Bacterial regulatory protein, Fis family 536 576 5.4E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_2415 e1545f014e143f1e795d459fc847f85c 580 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 473 482 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_2007 7be4705490441c18f9150c855b546821 66 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 20 29 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 Clos_2007 7be4705490441c18f9150c855b546821 66 Gene3D G3DSA:1.10.8.910 16 63 9.5E-7 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily Clos_2007 7be4705490441c18f9150c855b546821 66 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 7 56 1.5E-9 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Clos_1730 6689c063423c249ad0f5ae98332a21bc 191 PIRSF PIRSF016661 5 190 2.6E-42 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Clos_1730 6689c063423c249ad0f5ae98332a21bc 191 Pfam PF02632 BioY family 42 184 3.2E-36 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Clos_1730 6689c063423c249ad0f5ae98332a21bc 191 Gene3D G3DSA:1.10.1760.20 7 188 1.5E-51 T 11-10-2018 Clos_2286 263d706b09738a3adde41c1ef45138c4 433 Pfam PF13726 Na+-H+ antiporter family 4 90 2.1E-25 T 11-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal Clos_2286 263d706b09738a3adde41c1ef45138c4 433 Pfam PF03553 Na+/H+ antiporter family 144 426 5.4E-61 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Clos_0936 deba26ec15b5ab3ddeeefd88606b2a65 157 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 122 128 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Clos_0936 deba26ec15b5ab3ddeeefd88606b2a65 157 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 152 3.1E-33 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Clos_0936 deba26ec15b5ab3ddeeefd88606b2a65 157 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 6 68 3.1E-5 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Clos_0936 deba26ec15b5ab3ddeeefd88606b2a65 157 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 151 2.9E-36 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Clos_0936 deba26ec15b5ab3ddeeefd88606b2a65 157 Gene3D G3DSA:3.30.160.70 1 67 2.9E-15 T 11-10-2018 Clos_0936 deba26ec15b5ab3ddeeefd88606b2a65 157 Gene3D G3DSA:1.10.10.10 71 156 2.6E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0936 deba26ec15b5ab3ddeeefd88606b2a65 157 SUPERFAMILY SSF53155 5 77 2.55E-16 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Clos_0936 deba26ec15b5ab3ddeeefd88606b2a65 157 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 152 44.86 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 Clos_0936 deba26ec15b5ab3ddeeefd88606b2a65 157 SUPERFAMILY SSF46767 71 152 4.05E-33 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 Pfam PF00158 Sigma-54 interaction domain 144 310 1.1E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 SMART SM00448 4 115 1.2E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 Gene3D G3DSA:1.10.10.60 377 440 7.7E-18 T 11-10-2018 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 Pfam PF00072 Response regulator receiver domain 6 113 3.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 SUPERFAMILY SSF52540 143 380 7.02E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 SMART SM00382 164 307 1.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 Gene3D G3DSA:3.40.50.300 135 314 2.5E-65 T 11-10-2018 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 SUPERFAMILY SSF46689 351 438 2.12E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 Gene3D G3DSA:3.40.50.2300 2 134 1.9E-36 T 11-10-2018 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 SUPERFAMILY SSF52172 1 189 8.25E-43 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 5.9E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 5.9E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 Gene3D G3DSA:1.10.8.60 315 376 2.0E-17 T 11-10-2018 Clos_0204 09047c369a0c4e34e399e5e7dbcd7f95 440 Pfam PF02954 Bacterial regulatory protein, Fis family 396 436 4.3E-15 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Clos_1652 599c9c3af1fa21461ec6d3668dd02626 518 SUPERFAMILY SSF53041 4 157 1.44E-19 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Clos_1652 599c9c3af1fa21461ec6d3668dd02626 518 SMART SM00857 4 157 9.3E-20 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Clos_1652 599c9c3af1fa21461ec6d3668dd02626 518 Pfam PF00239 Resolvase, N terminal domain 6 156 7.0E-18 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Clos_1652 599c9c3af1fa21461ec6d3668dd02626 518 Gene3D G3DSA:3.40.50.1390 1 119 2.7E-18 T 11-10-2018 Clos_1652 599c9c3af1fa21461ec6d3668dd02626 518 Pfam PF07508 Recombinase 181 291 1.8E-29 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Clos_1652 599c9c3af1fa21461ec6d3668dd02626 518 Gene3D G3DSA:1.10.10.2600 141 292 2.8E-25 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily Clos_2845 783d508cd758689f25d3237ae9610b47 762 Gene3D G3DSA:1.10.101.10 36 112 6.8E-20 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Clos_2845 783d508cd758689f25d3237ae9610b47 762 SUPERFAMILY SSF47090 41 105 8.37E-16 T 11-10-2018 IPR036365 PGBD-like superfamily Clos_2845 783d508cd758689f25d3237ae9610b47 762 Pfam PF01471 Putative peptidoglycan binding domain 50 104 1.0E-13 T 11-10-2018 IPR002477 Peptidoglycan binding-like Clos_1374 8151a239b01f678db041d0bf9298174e 487 Gene3D G3DSA:3.40.1390.10 1 97 7.9E-25 T 11-10-2018 Clos_1374 8151a239b01f678db041d0bf9298174e 487 SUPERFAMILY SSF53244 328 481 9.31E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_1374 8151a239b01f678db041d0bf9298174e 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 480 2.1E-153 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Clos_1374 8151a239b01f678db041d0bf9298174e 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 481 33.508 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Clos_1374 8151a239b01f678db041d0bf9298174e 487 SUPERFAMILY SSF63418 1 96 5.75E-20 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Clos_1374 8151a239b01f678db041d0bf9298174e 487 Gene3D G3DSA:3.40.1190.10 98 331 3.8E-78 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_1374 8151a239b01f678db041d0bf9298174e 487 Gene3D G3DSA:3.90.190.20 332 485 9.8E-56 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Clos_1374 8151a239b01f678db041d0bf9298174e 487 Pfam PF01225 Mur ligase family, catalytic domain 26 95 5.5E-10 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Clos_1374 8151a239b01f678db041d0bf9298174e 487 Pfam PF08245 Mur ligase middle domain 107 307 8.7E-51 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Clos_1374 8151a239b01f678db041d0bf9298174e 487 SUPERFAMILY SSF53623 98 327 1.44E-71 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Clos_1374 8151a239b01f678db041d0bf9298174e 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 412 1.3E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Clos_0511 1545a882d4648ecf8127274dda971b1a 147 Gene3D G3DSA:3.100.10.10 66 147 8.7E-24 T 11-10-2018 Clos_0511 1545a882d4648ecf8127274dda971b1a 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 145 9.4E-39 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P Clos_0511 1545a882d4648ecf8127274dda971b1a 147 SUPERFAMILY SSF52080 4 144 3.01E-48 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Clos_0511 1545a882d4648ecf8127274dda971b1a 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 5.2E-53 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0511 1545a882d4648ecf8127274dda971b1a 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 111 141 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0511 1545a882d4648ecf8127274dda971b1a 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 147 22.102 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Clos_0452 adb00df0a083ef4ba0b850c5db1747a9 784 TIGRFAM TIGR02505 RTPR: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 117 784 2.9E-119 T 11-10-2018 IPR013345 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0006260|GO:0008998|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 Clos_0452 adb00df0a083ef4ba0b850c5db1747a9 784 SUPERFAMILY SSF51998 108 751 1.46E-132 T 11-10-2018 Clos_0452 adb00df0a083ef4ba0b850c5db1747a9 784 Gene3D G3DSA:3.30.1620.10 244 351 7.2E-189 T 11-10-2018 Clos_0452 adb00df0a083ef4ba0b850c5db1747a9 784 Gene3D G3DSA:3.20.70.20 107 733 7.2E-189 T 11-10-2018 Clos_0452 adb00df0a083ef4ba0b850c5db1747a9 784 Pfam PF02867 Ribonucleotide reductase, barrel domain 311 559 2.6E-10 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Clos_0452 adb00df0a083ef4ba0b850c5db1747a9 784 Gene3D G3DSA:3.90.1390.10 615 752 7.2E-189 T 11-10-2018 Clos_0452 adb00df0a083ef4ba0b850c5db1747a9 784 Pfam PF03477 ATP cone domain 2 90 2.3E-21 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Clos_0966 a83aacd406e9e10e3e561816c516da98 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 293 2.6E-43 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Clos_1419 e3c4c88279a395b7cf21afa9e5d6f356 593 Gene3D G3DSA:2.30.310.10 1 167 4.0E-67 T 11-10-2018 Clos_1419 e3c4c88279a395b7cf21afa9e5d6f356 593 Pfam PF05670 Domain of unknown function (DUF814) 473 559 1.9E-30 T 11-10-2018 IPR008532 Domain of unknown function DUF814 Clos_1419 e3c4c88279a395b7cf21afa9e5d6f356 593 SUPERFAMILY SSF46946 172 239 1.68E-6 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Clos_1419 e3c4c88279a395b7cf21afa9e5d6f356 593 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 460 3.0E-161 T 11-10-2018 Clos_2575 96d91cc9491661326617a08935907300 349 PIRSF PIRSF004930 1 347 4.1E-125 T 11-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Clos_2575 96d91cc9491661326617a08935907300 349 Gene3D G3DSA:3.90.870.10 1 212 7.9E-82 T 11-10-2018 Clos_2575 96d91cc9491661326617a08935907300 349 Gene3D G3DSA:3.40.50.11030 215 349 9.6E-40 T 11-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Clos_2575 96d91cc9491661326617a08935907300 349 Pfam PF03481 Putative GTP-binding controlling metal-binding 198 341 3.6E-27 T 11-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain Clos_2575 96d91cc9491661326617a08935907300 349 Pfam PF01300 Telomere recombination 21 196 5.6E-57 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Clos_2575 96d91cc9491661326617a08935907300 349 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 207 3.9E-63 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Clos_2575 96d91cc9491661326617a08935907300 349 SUPERFAMILY SSF55821 5 209 5.8E-65 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Clos_2564 5f446e356ce0e6f823f83249245ba143 167 Pfam PF00430 ATP synthase B/B' CF(0) 10 141 3.8E-28 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Clos_2564 5f446e356ce0e6f823f83249245ba143 167 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 14 159 2.0E-29 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Clos_2564 5f446e356ce0e6f823f83249245ba143 167 Hamap MF_01398 ATP synthase subunit b [atpF]. 5 142 12.698 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Clos_2564 5f446e356ce0e6f823f83249245ba143 167 SUPERFAMILY SSF81573 68 125 1.18E-7 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Clos_0864 d93cede9a5bd8e0b5e19ca7e9908e5b7 534 Gene3D G3DSA:3.20.20.140 56 489 1.1E-127 T 11-10-2018 Clos_0864 d93cede9a5bd8e0b5e19ca7e9908e5b7 534 SUPERFAMILY SSF51556 55 489 5.18E-32 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_0864 d93cede9a5bd8e0b5e19ca7e9908e5b7 534 Pfam PF07969 Amidohydrolase family 44 530 4.1E-89 T 11-10-2018 IPR013108 Amidohydrolase 3 Clos_0864 d93cede9a5bd8e0b5e19ca7e9908e5b7 534 Gene3D G3DSA:3.10.310.70 74 193 1.1E-127 T 11-10-2018 Clos_0864 d93cede9a5bd8e0b5e19ca7e9908e5b7 534 Gene3D G3DSA:2.30.40.10 7 507 1.1E-127 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0864 d93cede9a5bd8e0b5e19ca7e9908e5b7 534 SUPERFAMILY SSF51338 2 530 1.51E-20 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0763 6dfc21d201216fac2cf5a743a8f952c8 645 Pfam PF00092 von Willebrand factor type A domain 437 600 9.2E-10 T 11-10-2018 IPR002035 von Willebrand factor, type A Clos_0763 6dfc21d201216fac2cf5a743a8f952c8 645 Gene3D G3DSA:3.40.50.410 423 607 4.0E-17 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_0763 6dfc21d201216fac2cf5a743a8f952c8 645 SMART SM00327 434 632 5.0E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A Clos_0763 6dfc21d201216fac2cf5a743a8f952c8 645 SUPERFAMILY SSF53300 434 598 6.23E-15 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_0249 229064efa537d10951a19b486ca6410f 285 Gene3D G3DSA:3.40.50.10860 7 275 2.4E-94 T 11-10-2018 Clos_0249 229064efa537d10951a19b486ca6410f 285 SUPERFAMILY SSF53223 3 120 2.49E-27 T 11-10-2018 Clos_0249 229064efa537d10951a19b486ca6410f 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 119 2.5E-29 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 8.7E-60 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 3.8E-56 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 3.8E-56 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 3.8E-56 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 3.8E-56 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 3.8E-56 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 3.8E-56 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 3.8E-56 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 282 33.207 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Clos_0249 229064efa537d10951a19b486ca6410f 285 Gene3D G3DSA:3.40.50.720 5 258 2.4E-94 T 11-10-2018 Clos_0249 229064efa537d10951a19b486ca6410f 285 SUPERFAMILY SSF51735 122 280 1.31E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1473 2639babea3eca1139ceec5505496fe1e 365 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 289 2.3E-76 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Clos_1473 2639babea3eca1139ceec5505496fe1e 365 SUPERFAMILY SSF102405 83 289 1.52E-42 T 11-10-2018 Clos_1473 2639babea3eca1139ceec5505496fe1e 365 Gene3D G3DSA:3.40.50.450 4 296 3.6E-100 T 11-10-2018 Clos_1473 2639babea3eca1139ceec5505496fe1e 365 SUPERFAMILY SSF47781 9 71 2.83E-5 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_1473 2639babea3eca1139ceec5505496fe1e 365 Pfam PF02481 DNA recombination-mediator protein A 75 279 3.7E-80 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Clos_1212 734e27e8ea311c69d4aa57c62fdc8a4a 403 Gene3D G3DSA:2.30.40.10 29 396 5.0E-85 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_1212 734e27e8ea311c69d4aa57c62fdc8a4a 403 SUPERFAMILY SSF51556 63 369 7.66E-56 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_1212 734e27e8ea311c69d4aa57c62fdc8a4a 403 Gene3D G3DSA:3.20.20.140 63 358 5.0E-85 T 11-10-2018 Clos_1212 734e27e8ea311c69d4aa57c62fdc8a4a 403 SUPERFAMILY SSF51338 23 70 8.91E-9 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_2814 5c6278cbfa88bb517833ba4ca29ac154 436 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 273 357 2.6E-14 T 11-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain Clos_2814 5c6278cbfa88bb517833ba4ca29ac154 436 Pfam PF04326 Putative DNA-binding domain 6 120 7.0E-16 T 11-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Clos_2814 5c6278cbfa88bb517833ba4ca29ac154 436 Gene3D G3DSA:3.30.565.60 196 360 2.1E-33 T 11-10-2018 IPR038475 RecG, C-terminal domain superfamily Clos_2814 5c6278cbfa88bb517833ba4ca29ac154 436 Gene3D G3DSA:3.30.950.30 3 128 2.2E-20 T 11-10-2018 IPR038461 Schlafen, AAA domain superfamily Clos_0174 3f6e72145727f5053bfb8d28a4dd5798 330 Pfam PF14249 Tocopherol cyclase 132 319 1.6E-16 T 11-10-2018 IPR025893 Tocopherol cyclase GO:0009976 Clos_0174 3f6e72145727f5053bfb8d28a4dd5798 330 SUPERFAMILY SSF159245 19 202 2.88E-16 T 11-10-2018 Clos_0826 165a4c9f09a2a728247814f53bf96f5a 683 SUPERFAMILY SSF56601 160 476 8.54E-77 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_0826 165a4c9f09a2a728247814f53bf96f5a 683 Gene3D G3DSA:3.40.710.10 160 479 5.5E-81 T 11-10-2018 Clos_0826 165a4c9f09a2a728247814f53bf96f5a 683 SUPERFAMILY SSF55383 51 131 1.57E-13 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_0826 165a4c9f09a2a728247814f53bf96f5a 683 Pfam PF07833 Copper amine oxidase N-terminal domain 48 136 1.8E-15 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Clos_0826 165a4c9f09a2a728247814f53bf96f5a 683 Pfam PF11954 Domain of unknown function (DUF3471) 594 669 9.7E-9 T 11-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal Clos_0826 165a4c9f09a2a728247814f53bf96f5a 683 Pfam PF11954 Domain of unknown function (DUF3471) 494 584 1.8E-12 T 11-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal Clos_0826 165a4c9f09a2a728247814f53bf96f5a 683 Gene3D G3DSA:3.30.457.10 52 128 1.8E-12 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_0826 165a4c9f09a2a728247814f53bf96f5a 683 Pfam PF00144 Beta-lactamase 172 466 2.1E-57 T 11-10-2018 IPR001466 Beta-lactamase-related Clos_2455 4f8e9d9b57e81eb3bbeb8453b0b1e973 372 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 351 362 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_2455 4f8e9d9b57e81eb3bbeb8453b0b1e973 372 Gene3D G3DSA:3.20.20.70 3 288 1.4E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2455 4f8e9d9b57e81eb3bbeb8453b0b1e973 372 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 3 297 8.2E-61 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Clos_2455 4f8e9d9b57e81eb3bbeb8453b0b1e973 372 Gene3D G3DSA:3.30.70.20 317 372 1.5E-11 T 11-10-2018 Clos_2455 4f8e9d9b57e81eb3bbeb8453b0b1e973 372 Pfam PF00037 4Fe-4S binding domain 345 364 4.3E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_2455 4f8e9d9b57e81eb3bbeb8453b0b1e973 372 SUPERFAMILY SSF54862 322 371 1.91E-13 T 11-10-2018 Clos_2455 4f8e9d9b57e81eb3bbeb8453b0b1e973 372 SUPERFAMILY SSF51395 1 298 2.34E-67 T 11-10-2018 Clos_2455 4f8e9d9b57e81eb3bbeb8453b0b1e973 372 Pfam PF01180 Dihydroorotate dehydrogenase 3 280 1.7E-39 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Clos_2372 af9cbe3bc3e9bbc43b64ab4de8c21a73 359 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 16 353 2.5E-72 T 11-10-2018 IPR014227 Putative transport protein YtvI-like Clos_2372 af9cbe3bc3e9bbc43b64ab4de8c21a73 359 Pfam PF01594 AI-2E family transporter 17 349 1.9E-44 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Clos_2400 0411d7a9f9cf06006f2ed49d3e7b48f4 100 SMART SM00877 5 82 3.1E-32 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2400 0411d7a9f9cf06006f2ed49d3e7b48f4 100 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 5 64 2.0E-25 T 11-10-2018 Clos_2400 0411d7a9f9cf06006f2ed49d3e7b48f4 100 Pfam PF00936 BMC domain 6 82 2.8E-24 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2400 0411d7a9f9cf06006f2ed49d3e7b48f4 100 Gene3D G3DSA:3.30.70.1710 1 98 1.3E-34 T 11-10-2018 Clos_2400 0411d7a9f9cf06006f2ed49d3e7b48f4 100 SUPERFAMILY SSF143414 4 92 8.5E-29 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_2041 c433f2bbeb1af581b429c3a096b526dd 334 Pfam PF09084 NMT1/THI5 like 45 257 3.5E-23 T 11-10-2018 IPR015168 SsuA/THI5-like Clos_2041 c433f2bbeb1af581b429c3a096b526dd 334 Gene3D G3DSA:3.40.190.10 35 127 5.8E-16 T 11-10-2018 Clos_2041 c433f2bbeb1af581b429c3a096b526dd 334 SUPERFAMILY SSF53850 38 259 4.43E-34 T 11-10-2018 Clos_2041 c433f2bbeb1af581b429c3a096b526dd 334 Gene3D G3DSA:3.40.190.10 153 333 4.6E-34 T 11-10-2018 Clos_2027 073fd63eb200795b5727920ff0b2985d 312 Gene3D G3DSA:2.130.10.10 197 311 2.0E-15 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Clos_2027 073fd63eb200795b5727920ff0b2985d 312 SUPERFAMILY SSF51004 57 310 3.4E-52 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Clos_2027 073fd63eb200795b5727920ff0b2985d 312 Gene3D G3DSA:2.130.10.10 5 194 5.4E-37 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Clos_2027 073fd63eb200795b5727920ff0b2985d 312 Pfam PF10282 Lactonase, 7-bladed beta-propeller 16 161 5.6E-10 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller Clos_0116 144ca1c4884f5850ba6040f4387683d2 175 SUPERFAMILY SSF55729 2 170 1.06E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0116 144ca1c4884f5850ba6040f4387683d2 175 Gene3D G3DSA:3.40.630.30 15 153 4.9E-25 T 11-10-2018 Clos_0116 144ca1c4884f5850ba6040f4387683d2 175 Pfam PF13302 Acetyltransferase (GNAT) domain 25 153 1.6E-11 T 11-10-2018 IPR000182 GNAT domain Clos_0194 c7083dd5748d1e7fff7fd3cebfbb53d4 340 Pfam PF13205 Bacterial Ig-like domain 41 154 2.1E-11 T 11-10-2018 IPR032812 SbsA, Ig-like domain Clos_0194 c7083dd5748d1e7fff7fd3cebfbb53d4 340 Pfam PF00395 S-layer homology domain 223 264 7.9E-8 T 11-10-2018 IPR001119 S-layer homology domain Clos_0194 c7083dd5748d1e7fff7fd3cebfbb53d4 340 Pfam PF00395 S-layer homology domain 163 204 2.7E-11 T 11-10-2018 IPR001119 S-layer homology domain Clos_0194 c7083dd5748d1e7fff7fd3cebfbb53d4 340 Pfam PF00395 S-layer homology domain 286 329 3.1E-11 T 11-10-2018 IPR001119 S-layer homology domain Clos_1606 1788c7fac283fedb792d74cefc436fa9 268 PIRSF PIRSF005578 1 265 3.6E-107 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Clos_1606 1788c7fac283fedb792d74cefc436fa9 268 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 6 237 1.6E-88 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Clos_1606 1788c7fac283fedb792d74cefc436fa9 268 Gene3D G3DSA:3.40.50.150 64 268 9.4E-87 T 11-10-2018 Clos_1606 1788c7fac283fedb792d74cefc436fa9 268 SUPERFAMILY SSF55174 4 70 8.98E-14 T 11-10-2018 Clos_1606 1788c7fac283fedb792d74cefc436fa9 268 SUPERFAMILY SSF53335 53 247 3.07E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1606 1788c7fac283fedb792d74cefc436fa9 268 Pfam PF01479 S4 domain 5 49 6.9E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1606 1788c7fac283fedb792d74cefc436fa9 268 Gene3D G3DSA:3.10.290.10 2 63 3.2E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_1606 1788c7fac283fedb792d74cefc436fa9 268 Pfam PF01728 FtsJ-like methyltransferase 61 241 1.9E-21 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Clos_1606 1788c7fac283fedb792d74cefc436fa9 268 SMART SM00363 5 70 5.7E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1605 65c047404511861015e68a0906d1fee9 149 PRINTS PR01467 Bacterial arginine repressor signature 87 100 2.8E-25 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Clos_1605 65c047404511861015e68a0906d1fee9 149 PRINTS PR01467 Bacterial arginine repressor signature 20 33 2.8E-25 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Clos_1605 65c047404511861015e68a0906d1fee9 149 PRINTS PR01467 Bacterial arginine repressor signature 36 51 2.8E-25 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Clos_1605 65c047404511861015e68a0906d1fee9 149 PRINTS PR01467 Bacterial arginine repressor signature 117 132 2.8E-25 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Clos_1605 65c047404511861015e68a0906d1fee9 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 60.896 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Clos_1605 65c047404511861015e68a0906d1fee9 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 86 142 8.0E-8 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Clos_1605 65c047404511861015e68a0906d1fee9 149 SUPERFAMILY SSF46785 2 67 8.3E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1605 65c047404511861015e68a0906d1fee9 149 Pfam PF02863 Arginine repressor, C-terminal domain 79 145 3.1E-27 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Clos_1605 65c047404511861015e68a0906d1fee9 149 Pfam PF01316 Arginine repressor, DNA binding domain 2 67 3.1E-24 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 Clos_1605 65c047404511861015e68a0906d1fee9 149 Gene3D G3DSA:1.10.10.10 3 65 3.7E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1605 65c047404511861015e68a0906d1fee9 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 4 148 4.3E-47 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Clos_1605 65c047404511861015e68a0906d1fee9 149 Gene3D G3DSA:3.30.1360.40 71 148 8.0E-26 T 11-10-2018 Clos_1605 65c047404511861015e68a0906d1fee9 149 SUPERFAMILY SSF55252 79 147 1.7E-18 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 Clos_0856 d17e1e21af0567f99b0a37e8d6f2b15d 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 414 1.4E-79 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0856 d17e1e21af0567f99b0a37e8d6f2b15d 461 PIRSF PIRSF006603 8 460 1.2E-115 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0856 d17e1e21af0567f99b0a37e8d6f2b15d 461 Pfam PF01554 MatE 250 411 5.9E-30 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0856 d17e1e21af0567f99b0a37e8d6f2b15d 461 Pfam PF01554 MatE 28 188 4.6E-36 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_2270 d78709dbb3cc6e073d54e6a67de56cbf 359 Pfam PF04230 Polysaccharide pyruvyl transferase 14 287 3.6E-51 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase Clos_2270 d78709dbb3cc6e073d54e6a67de56cbf 359 TIGRFAM TIGR03609 S_layer_CsaB: polysaccharide pyruvyl transferase CsaB 4 300 1.2E-85 T 11-10-2018 IPR019896 Polysaccharide pyruvyl transferase, CsaB Clos_2283 d5d89f155373481e0dad309b153e9918 228 Gene3D G3DSA:1.10.3720.10 3 219 2.8E-49 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2283 d5d89f155373481e0dad309b153e9918 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 215 1.8E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2283 d5d89f155373481e0dad309b153e9918 228 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 214 5.4E-70 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Clos_2283 d5d89f155373481e0dad309b153e9918 228 SUPERFAMILY SSF161098 6 214 2.62E-44 T 11-10-2018 IPR035906 MetI-like superfamily Clos_1350 26de440657538a6de363d4709656900f 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 318 8.8E-29 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_1350 26de440657538a6de363d4709656900f 322 SMART SM00382 35 241 1.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1350 26de440657538a6de363d4709656900f 322 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1350 26de440657538a6de363d4709656900f 322 Pfam PF00005 ABC transporter 27 183 4.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1350 26de440657538a6de363d4709656900f 322 Gene3D G3DSA:3.40.50.300 4 322 6.8E-103 T 11-10-2018 Clos_1350 26de440657538a6de363d4709656900f 322 SUPERFAMILY SSF52540 35 314 3.13E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1350 26de440657538a6de363d4709656900f 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 4.7E-20 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Clos_1867 87d0eba07de59de0b7bca4676dc2636d 1085 SUPERFAMILY SSF52540 187 387 4.48E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1867 87d0eba07de59de0b7bca4676dc2636d 1085 SUPERFAMILY SSF48371 651 865 4.67E-12 T 11-10-2018 IPR016024 Armadillo-type fold Clos_1867 87d0eba07de59de0b7bca4676dc2636d 1085 Gene3D G3DSA:3.40.50.300 195 358 1.2E-8 T 11-10-2018 Clos_1867 87d0eba07de59de0b7bca4676dc2636d 1085 Gene3D G3DSA:3.90.1570.30 1 141 4.4E-10 T 11-10-2018 Clos_1867 87d0eba07de59de0b7bca4676dc2636d 1085 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 5 124 2.2E-10 T 11-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain Clos_1047 b22557183ec6e01c038db9d6b358fea2 197 Pfam PF06114 IrrE N-terminal-like domain 60 163 7.1E-12 T 11-10-2018 IPR010359 IrrE N-terminal-like domain Clos_0889 c6f6452d0ee692a86d49ab4e211180dd 363 PIRSF PIRSF006268 1 356 2.8E-76 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Clos_0889 c6f6452d0ee692a86d49ab4e211180dd 363 Gene3D G3DSA:3.10.520.20 23 359 1.2E-88 T 11-10-2018 Clos_0889 c6f6452d0ee692a86d49ab4e211180dd 363 SUPERFAMILY SSF143631 36 352 3.14E-72 T 11-10-2018 IPR003374 ApbE-like superfamily Clos_0889 c6f6452d0ee692a86d49ab4e211180dd 363 Pfam PF02424 ApbE family 41 335 1.3E-59 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Clos_2029 e274ee23a50fbae820af46bec6fc74dc 448 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 417 435 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 Clos_2029 e274ee23a50fbae820af46bec6fc74dc 448 SUPERFAMILY SSF53335 1 437 4.09E-79 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2029 e274ee23a50fbae820af46bec6fc74dc 448 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 87 435 2.9E-50 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_2029 e274ee23a50fbae820af46bec6fc74dc 448 Pfam PF00145 C-5 cytosine-specific DNA methylase 2 42 9.2E-9 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_2029 e274ee23a50fbae820af46bec6fc74dc 448 Pfam PF00145 C-5 cytosine-specific DNA methylase 117 436 9.2E-56 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_2029 e274ee23a50fbae820af46bec6fc74dc 448 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 128 140 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 Clos_2029 e274ee23a50fbae820af46bec6fc74dc 448 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 171 185 2.0E-14 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_2029 e274ee23a50fbae820af46bec6fc74dc 448 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 225 238 2.0E-14 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_2029 e274ee23a50fbae820af46bec6fc74dc 448 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 2.0E-14 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Clos_0838 cc3ef3a69f164bdf79f377364d1b3f98 137 Pfam PF00892 EamA-like transporter family 3 136 6.1E-24 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_0838 cc3ef3a69f164bdf79f377364d1b3f98 137 SUPERFAMILY SSF103481 61 136 2.75E-12 T 11-10-2018 Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 318 2.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 2.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 357 2.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 332 2.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 SUPERFAMILY SSF55874 231 377 2.36E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 SMART SM00388 159 226 1.9E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 Gene3D G3DSA:3.30.565.10 230 378 2.4E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 161 223 1.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 Gene3D G3DSA:1.10.287.130 109 226 1.0E-22 T 11-10-2018 Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 SMART SM00387 267 378 1.9E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 377 1.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0788 2cb2ea9d8098f28602db53ac1bf6a93a 378 SUPERFAMILY SSF47384 143 221 4.71E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0274 b650a9b665482bdcc99e6e4d036df37a 476 Pfam PF03553 Na+/H+ antiporter family 160 453 1.9E-62 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Clos_0274 b650a9b665482bdcc99e6e4d036df37a 476 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 457 5.2E-152 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 Clos_1874 f80188977c6933df8048fdc177ae22eb 409 Pfam PF13529 Peptidase_C39 like family 241 375 8.3E-21 T 11-10-2018 IPR039564 Peptidase C39-like Clos_1874 f80188977c6933df8048fdc177ae22eb 409 Gene3D G3DSA:3.90.70.10 264 397 9.3E-18 T 11-10-2018 Clos_0502 655004c3b7c5cad0524a3eadf2766850 122 SMART SM01374 1 122 2.4E-89 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Clos_0502 655004c3b7c5cad0524a3eadf2766850 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.846 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Clos_0502 655004c3b7c5cad0524a3eadf2766850 122 SUPERFAMILY SSF50193 1 122 5.63E-52 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0502 655004c3b7c5cad0524a3eadf2766850 122 Gene3D G3DSA:2.40.150.20 1 122 7.7E-55 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Clos_0502 655004c3b7c5cad0524a3eadf2766850 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 8.7E-57 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Clos_0502 655004c3b7c5cad0524a3eadf2766850 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 6.5E-58 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Clos_0502 655004c3b7c5cad0524a3eadf2766850 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_1569 7e0f9af0d5580660baaae0db66d05759 177 Gene3D G3DSA:3.40.920.10 1 177 1.0E-55 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_1569 7e0f9af0d5580660baaae0db66d05759 177 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 13 172 8.6E-29 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Clos_1569 7e0f9af0d5580660baaae0db66d05759 177 SUPERFAMILY SSF53323 4 175 7.72E-33 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_1290 d92d614fd27089a9a9986f088ec4682a 419 Gene3D G3DSA:3.40.50.300 194 419 4.8E-50 T 11-10-2018 Clos_1290 d92d614fd27089a9a9986f088ec4682a 419 SMART SM00490 292 373 2.8E-12 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1290 d92d614fd27089a9a9986f088ec4682a 419 Gene3D G3DSA:3.40.50.10810 4 184 2.7E-30 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Clos_1290 d92d614fd27089a9a9986f088ec4682a 419 Pfam PF00271 Helicase conserved C-terminal domain 263 373 3.8E-12 T 11-10-2018 IPR001650 Helicase, C-terminal Clos_1290 d92d614fd27089a9a9986f088ec4682a 419 Pfam PF00176 SNF2 family N-terminal domain 13 223 1.8E-28 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Clos_1290 d92d614fd27089a9a9986f088ec4682a 419 SUPERFAMILY SSF52540 83 416 1.45E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1290 d92d614fd27089a9a9986f088ec4682a 419 SUPERFAMILY SSF52540 4 191 1.88E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1159 db02061abe320fefbf51417bee30813a 338 Pfam PF01070 FMN-dependent dehydrogenase 194 336 2.9E-60 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Clos_1159 db02061abe320fefbf51417bee30813a 338 Pfam PF01070 FMN-dependent dehydrogenase 37 179 7.6E-14 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Clos_1159 db02061abe320fefbf51417bee30813a 338 SUPERFAMILY SSF51395 38 337 8.79E-60 T 11-10-2018 Clos_1159 db02061abe320fefbf51417bee30813a 338 PIRSF PIRSF000138 2 190 1.1E-12 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Clos_1159 db02061abe320fefbf51417bee30813a 338 PIRSF PIRSF000138 184 337 9.4E-60 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Clos_1159 db02061abe320fefbf51417bee30813a 338 Gene3D G3DSA:3.20.20.70 36 337 1.2E-75 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2103 a75da05d91e3b89b3f8f0f988e6a8f6a 513 SUPERFAMILY SSF55383 45 85 6.15E-6 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_2103 a75da05d91e3b89b3f8f0f988e6a8f6a 513 Pfam PF07833 Copper amine oxidase N-terminal domain 60 145 4.4E-7 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Clos_2103 a75da05d91e3b89b3f8f0f988e6a8f6a 513 SMART SM00900 176 268 2.4E-6 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2103 a75da05d91e3b89b3f8f0f988e6a8f6a 513 Pfam PF04205 FMN-binding domain 180 265 4.0E-5 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_2103 a75da05d91e3b89b3f8f0f988e6a8f6a 513 Gene3D G3DSA:3.90.1010.20 162 281 5.6E-28 T 11-10-2018 Clos_2103 a75da05d91e3b89b3f8f0f988e6a8f6a 513 Gene3D G3DSA:3.90.1010.20 401 513 8.2E-7 T 11-10-2018 Clos_2103 a75da05d91e3b89b3f8f0f988e6a8f6a 513 Gene3D G3DSA:3.90.1010.20 282 400 2.2E-20 T 11-10-2018 Clos_1776 a3790d67e76a027c051e450a43c04a26 297 SUPERFAMILY SSF110997 101 164 4.58E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Clos_2337 9594d1a97a32bcd235894a950e169da2 255 ProSitePatterns PS01028 Dehydroquinase class I active site. 115 145 - T 11-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Clos_2337 9594d1a97a32bcd235894a950e169da2 255 Gene3D G3DSA:3.20.20.70 1 254 2.0E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2337 9594d1a97a32bcd235894a950e169da2 255 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 18 250 36.754 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Clos_2337 9594d1a97a32bcd235894a950e169da2 255 Pfam PF01487 Type I 3-dehydroquinase 20 247 1.0E-69 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Clos_2337 9594d1a97a32bcd235894a950e169da2 255 SUPERFAMILY SSF51569 3 251 3.66E-79 T 11-10-2018 Clos_2337 9594d1a97a32bcd235894a950e169da2 255 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 18 246 2.9E-72 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Clos_1890 01fcb5985e67840800b3e01a62ee9aeb 259 Pfam PF10127 Predicted nucleotidyltransferase 2 249 8.5E-99 T 11-10-2018 IPR018775 Nucleotidyltransferase, predicted Clos_0784 5ae0df0f4260364ae0f96e3c426ace66 233 Pfam PF03413 Peptidase propeptide and YPEB domain 173 227 2.2E-13 T 11-10-2018 IPR025711 PepSY domain Clos_0784 5ae0df0f4260364ae0f96e3c426ace66 233 Pfam PF03413 Peptidase propeptide and YPEB domain 95 153 4.7E-8 T 11-10-2018 IPR025711 PepSY domain Clos_0784 5ae0df0f4260364ae0f96e3c426ace66 233 Gene3D G3DSA:3.10.450.40 162 233 3.4E-19 T 11-10-2018 Clos_0784 5ae0df0f4260364ae0f96e3c426ace66 233 Gene3D G3DSA:3.10.450.40 86 157 2.4E-14 T 11-10-2018 Clos_2221 e2146493293ab3992ca7cf3061fb0b76 308 Pfam PF14343 PrcB C-terminal 127 184 3.8E-12 T 11-10-2018 IPR025748 PrcB C-terminal domain Clos_2221 e2146493293ab3992ca7cf3061fb0b76 308 Pfam PF10648 Immunoglobulin-like domain of bacterial spore germination 212 295 2.7E-26 T 11-10-2018 IPR018911 Bacterial spore germination, immunoglobulin-like domain Clos_0044 7af6cdf95e2286fcf4622730e7901de3 197 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 183 20.224 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Clos_0044 7af6cdf95e2286fcf4622730e7901de3 197 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 9.0E-18 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Clos_0044 7af6cdf95e2286fcf4622730e7901de3 197 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 180 8.8E-33 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Clos_0044 7af6cdf95e2286fcf4622730e7901de3 197 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 181 2.0E-13 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain Clos_0044 7af6cdf95e2286fcf4622730e7901de3 197 Pfam PF01386 Ribosomal L25p family 6 92 1.1E-16 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Clos_0044 7af6cdf95e2286fcf4622730e7901de3 197 SUPERFAMILY SSF50715 11 180 5.41E-35 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_0044 7af6cdf95e2286fcf4622730e7901de3 197 Gene3D G3DSA:2.170.120.20 97 192 2.8E-11 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal Clos_0044 7af6cdf95e2286fcf4622730e7901de3 197 Gene3D G3DSA:2.40.240.10 5 95 7.9E-19 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Clos_2343 bfe1199cebc090b141c8df2fad2affbb 431 Pfam PF00266 Aminotransferase class-V 64 294 6.6E-24 T 11-10-2018 IPR000192 Aminotransferase class V domain Clos_2343 bfe1199cebc090b141c8df2fad2affbb 431 Gene3D G3DSA:3.90.1150.10 296 430 1.5E-14 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_2343 bfe1199cebc090b141c8df2fad2affbb 431 Gene3D G3DSA:3.40.640.10 48 295 1.4E-35 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_2343 bfe1199cebc090b141c8df2fad2affbb 431 SUPERFAMILY SSF53383 17 425 8.06E-45 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2150 2817cfca4b553a39796b151f05c08c1f 327 SUPERFAMILY SSF53067 5 257 1.34E-43 T 11-10-2018 Clos_2150 2817cfca4b553a39796b151f05c08c1f 327 Gene3D G3DSA:3.30.420.40 100 240 7.5E-88 T 11-10-2018 Clos_2150 2817cfca4b553a39796b151f05c08c1f 327 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 257 7.7E-52 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Clos_2150 2817cfca4b553a39796b151f05c08c1f 327 Gene3D G3DSA:3.30.420.40 6 257 7.5E-88 T 11-10-2018 Clos_2150 2817cfca4b553a39796b151f05c08c1f 327 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 6 256 4.3E-57 T 11-10-2018 IPR008275 CoA enzyme activase Clos_2610 7ab6e096cf5cdda6e83e3b97499967cd 287 Pfam PF14505 Domain of unknown function (DUF4438) 27 284 1.9E-122 T 11-10-2018 IPR029433 Protein of unknown function DUF4438 Clos_2610 7ab6e096cf5cdda6e83e3b97499967cd 287 Gene3D G3DSA:2.102.30.10 3 279 9.8E-116 T 11-10-2018 Clos_2610 7ab6e096cf5cdda6e83e3b97499967cd 287 Gene3D G3DSA:4.10.1180.10 25 63 9.8E-116 T 11-10-2018 Clos_2610 7ab6e096cf5cdda6e83e3b97499967cd 287 Gene3D G3DSA:2.40.10.170 12 140 9.8E-116 T 11-10-2018 Clos_0589 87d46a1e385942eac55fd7d27e852b64 448 SMART SM00909 205 292 1.3E-8 T 11-10-2018 IPR019606 GerMN domain Clos_0589 87d46a1e385942eac55fd7d27e852b64 448 SMART SM00909 343 437 0.002 T 11-10-2018 IPR019606 GerMN domain Clos_0589 87d46a1e385942eac55fd7d27e852b64 448 Pfam PF10646 Sporulation and spore germination 180 286 5.8E-11 T 11-10-2018 IPR019606 GerMN domain Clos_0589 87d46a1e385942eac55fd7d27e852b64 448 Pfam PF10646 Sporulation and spore germination 360 425 9.6E-7 T 11-10-2018 IPR019606 GerMN domain Clos_2273 32ac83882271cea43c9f3a9431f85001 116 Gene3D G3DSA:2.30.30.110 1 115 9.4E-53 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Clos_2273 32ac83882271cea43c9f3a9431f85001 116 SUPERFAMILY SSF50118 2 113 1.8E-43 T 11-10-2018 Clos_2273 32ac83882271cea43c9f3a9431f85001 116 PIRSF PIRSF033490 1 113 4.8E-39 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Clos_2273 32ac83882271cea43c9f3a9431f85001 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 110 3.2E-34 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Clos_1207 736a1ec19ada4ba6146f139b4618a6f0 213 SUPERFAMILY SSF52540 18 212 3.15E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1207 736a1ec19ada4ba6146f139b4618a6f0 213 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 20 207 1.5E-58 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Clos_1207 736a1ec19ada4ba6146f139b4618a6f0 213 Pfam PF01121 Dephospho-CoA kinase 19 196 1.5E-56 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Clos_1207 736a1ec19ada4ba6146f139b4618a6f0 213 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 17 211 26.284 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Clos_1207 736a1ec19ada4ba6146f139b4618a6f0 213 Gene3D G3DSA:3.40.50.300 2 213 1.3E-75 T 11-10-2018 Clos_2737 49de301fdf6f8074a0e3baf0da4806cd 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 120 1.4E-15 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Clos_2737 49de301fdf6f8074a0e3baf0da4806cd 124 Gene3D G3DSA:3.10.180.10 1 123 7.0E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Clos_2737 49de301fdf6f8074a0e3baf0da4806cd 124 SUPERFAMILY SSF54593 1 123 3.09E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Clos_1662 0f5ea99bc2d2b22507493095c04ce4b5 86 Pfam PF06949 Protein of unknown function (DUF1292) 13 83 6.3E-17 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 Clos_1662 0f5ea99bc2d2b22507493095c04ce4b5 86 Hamap MF_01448 UPF0473 protein . 4 84 14.55 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 Clos_1316 49242a90b5039fec3f4867578db97800 496 Gene3D G3DSA:1.10.287.110 86 159 5.5E-11 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Clos_1316 49242a90b5039fec3f4867578db97800 496 SUPERFAMILY SSF46565 99 145 1.07E-8 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 35 163 5.0E-53 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 SUPERFAMILY SSF53223 5 183 6.08E-66 T 11-10-2018 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 100 113 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 214 234 1.0E-32 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 92 106 1.0E-32 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 172 194 1.0E-32 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 342 353 1.0E-32 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 Gene3D G3DSA:3.40.50.10860 37 180 8.4E-61 T 11-10-2018 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 SUPERFAMILY SSF51735 182 416 9.87E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 PIRSF PIRSF000185 2 416 1.5E-162 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 182 414 5.0E-78 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 Gene3D G3DSA:3.40.50.720 182 416 2.7E-90 T 11-10-2018 Clos_2459 65b058335f7b7be7382c1f0aaf95428a 416 SMART SM00839 183 414 5.2E-117 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Clos_2756 3dd1539891394f6d37aab1728951c414 347 Pfam PF13800 Sigma factor regulator N-terminal 30 117 2.3E-12 T 11-10-2018 IPR029101 Sigma factor regulator, N-terminal Clos_2756 3dd1539891394f6d37aab1728951c414 347 Pfam PF13791 Sigma factor regulator C-terminal 185 341 1.2E-31 T 11-10-2018 IPR025672 Sigma factor regulator C-terminal domain Clos_1250 5d31c3bf06d7817d7a71f0e0a0b753a2 353 SUPERFAMILY SSF159774 60 351 2.88E-91 T 11-10-2018 IPR023158 YerB-like superfamily Clos_1250 5d31c3bf06d7817d7a71f0e0a0b753a2 353 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 232 341 5.4E-31 T 11-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain Clos_1250 5d31c3bf06d7817d7a71f0e0a0b753a2 353 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 63 204 5.3E-44 T 11-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal Clos_1250 5d31c3bf06d7817d7a71f0e0a0b753a2 353 Gene3D G3DSA:3.50.90.10 48 353 6.0E-97 T 11-10-2018 IPR023158 YerB-like superfamily Clos_2774 a469065f69c2d03d84a4d8937b449b97 294 Gene3D G3DSA:3.40.50.1820 3 289 6.7E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_2774 a469065f69c2d03d84a4d8937b449b97 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 6.5E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_2774 a469065f69c2d03d84a4d8937b449b97 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 6.5E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_2774 a469065f69c2d03d84a4d8937b449b97 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 6.5E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_2774 a469065f69c2d03d84a4d8937b449b97 294 Pfam PF00561 alpha/beta hydrolase fold 24 270 5.1E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Clos_2774 a469065f69c2d03d84a4d8937b449b97 294 SUPERFAMILY SSF53474 5 287 2.89E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_1527 c826ecffe6613727a4f4e556aaea3683 98 SUPERFAMILY SSF55315 3 97 1.94E-24 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Clos_1527 c826ecffe6613727a4f4e556aaea3683 98 Gene3D G3DSA:3.30.1330.30 1 98 2.1E-32 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Clos_1527 c826ecffe6613727a4f4e556aaea3683 98 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 3 93 1.3E-14 T 11-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Clos_1391 9c918ea1488eb79aa793ac2ef1e3572e 270 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 30 267 6.1E-75 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Clos_1391 9c918ea1488eb79aa793ac2ef1e3572e 270 Gene3D G3DSA:3.60.140.10 4 269 8.4E-88 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Clos_1391 9c918ea1488eb79aa793ac2ef1e3572e 270 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 36 269 1.3E-55 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Clos_1391 9c918ea1488eb79aa793ac2ef1e3572e 270 SUPERFAMILY SSF64438 19 268 2.75E-78 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Clos_0291 7dc32230d4ef06bf51d68efa0959af7e 227 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 37 162 3.3E-53 T 11-10-2018 IPR014202 Sporulation stage II, protein R Clos_0291 7dc32230d4ef06bf51d68efa0959af7e 227 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 17 167 1.4E-60 T 11-10-2018 IPR014202 Sporulation stage II, protein R Clos_1196 08c02b4a5b5190262a46270826afa8ab 274 Gene3D G3DSA:3.40.50.10170 1 149 2.1E-55 T 11-10-2018 Clos_1196 08c02b4a5b5190262a46270826afa8ab 274 Gene3D G3DSA:3.30.1180.10 151 274 1.3E-34 T 11-10-2018 Clos_1196 08c02b4a5b5190262a46270826afa8ab 274 SUPERFAMILY SSF82549 2 274 8.63E-83 T 11-10-2018 Clos_1196 08c02b4a5b5190262a46270826afa8ab 274 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 270 2.3E-82 T 11-10-2018 IPR003797 DegV Clos_1196 08c02b4a5b5190262a46270826afa8ab 274 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 2 273 6.8E-96 T 11-10-2018 IPR003797 DegV Clos_1480 295794b53abc381d80e8c5a868c33390 339 SUPERFAMILY SSF48029 119 330 2.75E-70 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Clos_1480 295794b53abc381d80e8c5a868c33390 339 Pfam PF14842 FliG N-terminal domain 10 112 1.3E-39 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Clos_1480 295794b53abc381d80e8c5a868c33390 339 Pfam PF14841 FliG middle domain 120 194 1.9E-31 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Clos_1480 295794b53abc381d80e8c5a868c33390 339 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 339 3.1E-138 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Clos_1480 295794b53abc381d80e8c5a868c33390 339 SUPERFAMILY SSF48029 12 105 4.84E-24 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Clos_1480 295794b53abc381d80e8c5a868c33390 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 5.3E-77 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Clos_1480 295794b53abc381d80e8c5a868c33390 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 5.3E-77 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Clos_1480 295794b53abc381d80e8c5a868c33390 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 5.3E-77 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Clos_1480 295794b53abc381d80e8c5a868c33390 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 5.3E-77 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Clos_1480 295794b53abc381d80e8c5a868c33390 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 5.3E-77 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Clos_1480 295794b53abc381d80e8c5a868c33390 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 5.3E-77 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Clos_1480 295794b53abc381d80e8c5a868c33390 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 5.3E-77 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Clos_1480 295794b53abc381d80e8c5a868c33390 339 Gene3D G3DSA:1.10.220.30 108 199 1.9E-34 T 11-10-2018 Clos_1480 295794b53abc381d80e8c5a868c33390 339 Gene3D G3DSA:1.10.220.30 5 90 2.3E-22 T 11-10-2018 Clos_1480 295794b53abc381d80e8c5a868c33390 339 PIRSF PIRSF003161 4 339 2.2E-121 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Clos_1480 295794b53abc381d80e8c5a868c33390 339 Pfam PF01706 FliG C-terminal domain 223 329 2.4E-42 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Clos_1480 295794b53abc381d80e8c5a868c33390 339 Gene3D G3DSA:1.10.220.30 200 339 1.4E-49 T 11-10-2018 Clos_2633 11d1edf2989b14a122daf0ac21d75c17 173 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 18 94 7.7E-20 T 11-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like Clos_2633 11d1edf2989b14a122daf0ac21d75c17 173 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 14 124 9.8E-23 T 11-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ Clos_0394 bf13ec2f2492fb1f1aa0dbe639dfd91b 162 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 161 2.9E-44 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Clos_0394 bf13ec2f2492fb1f1aa0dbe639dfd91b 162 Pfam PF00364 Biotin-requiring enzyme 88 160 2.9E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Clos_0394 bf13ec2f2492fb1f1aa0dbe639dfd91b 162 Gene3D G3DSA:2.40.50.100 84 160 1.1E-28 T 11-10-2018 Clos_0394 bf13ec2f2492fb1f1aa0dbe639dfd91b 162 SUPERFAMILY SSF51230 84 160 4.32E-23 T 11-10-2018 IPR011053 Single hybrid motif Clos_0394 bf13ec2f2492fb1f1aa0dbe639dfd91b 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 2.6E-17 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Clos_0394 bf13ec2f2492fb1f1aa0dbe639dfd91b 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 2.6E-17 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Clos_0394 bf13ec2f2492fb1f1aa0dbe639dfd91b 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 2.6E-17 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Clos_0017 c2173645d06e1c53689a88acbe8044e1 99 Gene3D G3DSA:3.30.70.1060 1 93 1.3E-21 T 11-10-2018 Clos_0017 c2173645d06e1c53689a88acbe8044e1 99 Pfam PF03795 YCII-related domain 1 91 2.0E-10 T 11-10-2018 IPR005545 YCII-related Clos_0017 c2173645d06e1c53689a88acbe8044e1 99 SUPERFAMILY SSF54909 3 90 1.34E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Clos_2829 af79f80aca49510b937f9858f8e55bcf 356 Pfam PF16472 Domain of unknown function (DUF5050) 45 255 1.3E-17 T 11-10-2018 IPR032485 Domain of unknown function DUF5050 Clos_2829 af79f80aca49510b937f9858f8e55bcf 356 SUPERFAMILY SSF69304 146 349 4.05E-12 T 11-10-2018 Clos_0332 40f14bc07240d19f5699f47b9ed6eec5 238 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 11 238 1.0E-55 T 11-10-2018 Clos_0332 40f14bc07240d19f5699f47b9ed6eec5 238 Pfam PF12787 EcsC protein family 7 237 1.6E-71 T 11-10-2018 IPR024787 EcsC protein Clos_2827 5a04cc60f402201bc8dbc34c1d966007 673 SUPERFAMILY SSF53474 398 654 1.0E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_2827 5a04cc60f402201bc8dbc34c1d966007 673 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 26 113 1.2E-4 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 Clos_2827 5a04cc60f402201bc8dbc34c1d966007 673 SUPERFAMILY SSF82171 20 368 3.01E-31 T 11-10-2018 Clos_2827 5a04cc60f402201bc8dbc34c1d966007 673 Gene3D G3DSA:2.120.10.30 11 163 7.7E-15 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Clos_2827 5a04cc60f402201bc8dbc34c1d966007 673 Gene3D G3DSA:2.120.10.30 174 402 5.8E-14 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Clos_2827 5a04cc60f402201bc8dbc34c1d966007 673 Gene3D G3DSA:3.40.50.1820 403 661 5.7E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_2827 5a04cc60f402201bc8dbc34c1d966007 673 Pfam PF00326 Prolyl oligopeptidase family 458 655 9.5E-41 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Clos_1502 67660ba3acc7922535ff324cd962203a 409 SUPERFAMILY SSF52540 215 406 2.89E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1502 67660ba3acc7922535ff324cd962203a 409 SMART SM00962 216 407 2.0E-65 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1502 67660ba3acc7922535ff324cd962203a 409 Gene3D G3DSA:3.40.50.300 211 395 9.4E-76 T 11-10-2018 Clos_1502 67660ba3acc7922535ff324cd962203a 409 Pfam PF00448 SRP54-type protein, GTPase domain 217 406 3.2E-44 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Clos_1502 67660ba3acc7922535ff324cd962203a 409 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 303 6.2E-72 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 Clos_1502 67660ba3acc7922535ff324cd962203a 409 Gene3D G3DSA:1.20.120.1380 164 397 9.4E-76 T 11-10-2018 Clos_1502 67660ba3acc7922535ff324cd962203a 409 SMART SM00382 215 361 1.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2324 ab1a936355d6897255fa0440806aaf4b 324 Gene3D G3DSA:2.40.50.140 1 105 5.9E-6 T 11-10-2018 Clos_2324 ab1a936355d6897255fa0440806aaf4b 324 SMART SM00471 163 298 4.4E-4 T 11-10-2018 IPR003607 HD/PDEase domain Clos_2324 ab1a936355d6897255fa0440806aaf4b 324 SUPERFAMILY SSF109604 153 287 1.1E-13 T 11-10-2018 Clos_2324 ab1a936355d6897255fa0440806aaf4b 324 Pfam PF01336 OB-fold nucleic acid binding domain 29 94 2.4E-8 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Clos_2324 ab1a936355d6897255fa0440806aaf4b 324 Pfam PF01966 HD domain 168 287 7.8E-11 T 11-10-2018 IPR006674 HD domain Clos_2324 ab1a936355d6897255fa0440806aaf4b 324 Gene3D G3DSA:1.10.3210.10 144 314 2.3E-12 T 11-10-2018 Clos_1556 17fe5793c8e1c01c2166ab56b4e64b9f 209 SMART SM00422 8 76 1.7E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_1556 17fe5793c8e1c01c2166ab56b4e64b9f 209 Gene3D G3DSA:1.10.1660.10 1 79 5.8E-19 T 11-10-2018 Clos_1556 17fe5793c8e1c01c2166ab56b4e64b9f 209 SUPERFAMILY SSF46955 7 81 1.1E-15 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_1556 17fe5793c8e1c01c2166ab56b4e64b9f 209 Pfam PF13411 MerR HTH family regulatory protein 8 75 7.2E-22 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2419 3323f99a58a9b030c43f1d236357a592 470 Gene3D G3DSA:3.40.640.10 81 329 1.2E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_2419 3323f99a58a9b030c43f1d236357a592 470 Pfam PF00202 Aminotransferase class-III 49 444 2.3E-100 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Clos_2419 3323f99a58a9b030c43f1d236357a592 470 Gene3D G3DSA:3.90.1150.10 22 442 1.2E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_2419 3323f99a58a9b030c43f1d236357a592 470 SUPERFAMILY SSF53383 30 444 2.75E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2419 3323f99a58a9b030c43f1d236357a592 470 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Clos_1674 77a8190f68df6f83e124f9d4870ae995 490 SUPERFAMILY SSF89372 11 294 2.88E-11 T 11-10-2018 Clos_0372 23cf9a03e55e9047aecf3872a7d2cf9c 602 SUPERFAMILY SSF51556 82 342 1.41E-23 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_0372 23cf9a03e55e9047aecf3872a7d2cf9c 602 Hamap MF_01518 Adenine deaminase [ade]. 27 599 33.032 T 11-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Clos_0372 23cf9a03e55e9047aecf3872a7d2cf9c 602 SUPERFAMILY SSF51338 19 381 1.12E-17 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0372 23cf9a03e55e9047aecf3872a7d2cf9c 602 Gene3D G3DSA:3.20.20.140 82 337 3.1E-116 T 11-10-2018 Clos_0372 23cf9a03e55e9047aecf3872a7d2cf9c 602 Gene3D G3DSA:2.30.40.10 23 374 3.1E-116 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0372 23cf9a03e55e9047aecf3872a7d2cf9c 602 TIGRFAM TIGR01178 ade: adenine deaminase 27 597 3.3E-145 T 11-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Clos_0372 23cf9a03e55e9047aecf3872a7d2cf9c 602 Pfam PF01979 Amidohydrolase family 78 373 1.9E-22 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Clos_0372 23cf9a03e55e9047aecf3872a7d2cf9c 602 Pfam PF13382 Adenine deaminase C-terminal domain 431 596 3.3E-61 T 11-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Clos_1462 002d5f5317eaf42dde331d68c5a692fe 121 SUPERFAMILY SSF88659 4 103 1.38E-28 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_1462 002d5f5317eaf42dde331d68c5a692fe 121 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 2 93 1.3E-28 T 11-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like Clos_1462 002d5f5317eaf42dde331d68c5a692fe 121 Hamap MF_00245 UPF0122 protein . 2 108 19.45 T 11-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like Clos_1462 002d5f5317eaf42dde331d68c5a692fe 121 Gene3D G3DSA:1.10.10.10 1 117 7.4E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2388 761c1d0593d9c44ec4543b34dc8826f1 246 SMART SM00877 2 80 1.7E-30 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2388 761c1d0593d9c44ec4543b34dc8826f1 246 Pfam PF00936 BMC domain 3 80 4.1E-23 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_2388 761c1d0593d9c44ec4543b34dc8826f1 246 Gene3D G3DSA:3.30.70.1710 1 110 4.9E-34 T 11-10-2018 Clos_2388 761c1d0593d9c44ec4543b34dc8826f1 246 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 46 7.0E-11 T 11-10-2018 Clos_2388 761c1d0593d9c44ec4543b34dc8826f1 246 SUPERFAMILY SSF143414 2 89 1.57E-27 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_2692 a48593402176270409af74faa72838b9 466 Gene3D G3DSA:1.20.1730.10 23 465 7.7E-49 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Clos_2692 a48593402176270409af74faa72838b9 466 Pfam PF00474 Sodium:solute symporter family 36 420 2.0E-22 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Clos_2692 a48593402176270409af74faa72838b9 466 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 152 177 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site Clos_1585 e44ae3a483e69b213ec5e0a3c3c37caf 282 PIRSF PIRSF036979 1 282 2.8E-91 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Clos_1585 e44ae3a483e69b213ec5e0a3c3c37caf 282 Gene3D G3DSA:3.40.800.10 13 282 1.1E-90 T 11-10-2018 Clos_1585 e44ae3a483e69b213ec5e0a3c3c37caf 282 TIGRFAM TIGR01230 agmatinase: agmatinase 9 280 1.1E-87 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 Clos_1585 e44ae3a483e69b213ec5e0a3c3c37caf 282 SUPERFAMILY SSF52768 8 281 5.58E-75 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily Clos_1585 e44ae3a483e69b213ec5e0a3c3c37caf 282 ProSitePatterns PS01053 Arginase family signature. 210 231 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Clos_1585 e44ae3a483e69b213ec5e0a3c3c37caf 282 Pfam PF00491 Arginase family 20 279 5.0E-72 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Clos_1143 93dcb9b27415796fc22cf7c4b52cb699 153 Gene3D G3DSA:3.10.450.50 24 145 1.4E-23 T 11-10-2018 Clos_1143 93dcb9b27415796fc22cf7c4b52cb699 153 Pfam PF12680 SnoaL-like domain 35 122 4.3E-6 T 11-10-2018 IPR037401 SnoaL-like domain Clos_1143 93dcb9b27415796fc22cf7c4b52cb699 153 SUPERFAMILY SSF54427 25 143 5.96E-26 T 11-10-2018 IPR032710 NTF2-like domain superfamily Clos_0185 7ca9586ad0aa6fb65b45110638506d94 240 Gene3D G3DSA:3.40.50.300 1 240 6.3E-80 T 11-10-2018 Clos_0185 7ca9586ad0aa6fb65b45110638506d94 240 SMART SM00382 26 221 8.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0185 7ca9586ad0aa6fb65b45110638506d94 240 Pfam PF00005 ABC transporter 17 165 1.4E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0185 7ca9586ad0aa6fb65b45110638506d94 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0185 7ca9586ad0aa6fb65b45110638506d94 240 SUPERFAMILY SSF52540 1 235 3.92E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0185 7ca9586ad0aa6fb65b45110638506d94 240 PIRSF PIRSF039085 1 240 5.2E-118 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Clos_1885 ed94436d1ae9c43c28d2e3f27f9cb8ae 402 Pfam PF00395 S-layer homology domain 29 70 5.7E-16 T 11-10-2018 IPR001119 S-layer homology domain Clos_1885 ed94436d1ae9c43c28d2e3f27f9cb8ae 402 Pfam PF00395 S-layer homology domain 152 185 2.3E-11 T 11-10-2018 IPR001119 S-layer homology domain Clos_1211 a26a4534aef68678bdca0b4be8a2a225 164 PIRSF PIRSF004749 1 164 2.9E-27 T 11-10-2018 IPR023635 Peptide deformylase Clos_1211 a26a4534aef68678bdca0b4be8a2a225 164 Gene3D G3DSA:3.90.45.10 1 164 1.6E-35 T 11-10-2018 IPR036821 Peptide deformylase superfamily Clos_1211 a26a4534aef68678bdca0b4be8a2a225 164 Hamap MF_00163 Peptide deformylase [def]. 1 163 20.014 T 11-10-2018 IPR023635 Peptide deformylase Clos_1211 a26a4534aef68678bdca0b4be8a2a225 164 PRINTS PR01576 Peptide deformylase signature 91 102 2.0E-12 T 11-10-2018 IPR023635 Peptide deformylase Clos_1211 a26a4534aef68678bdca0b4be8a2a225 164 PRINTS PR01576 Peptide deformylase signature 122 151 2.0E-12 T 11-10-2018 IPR023635 Peptide deformylase Clos_1211 a26a4534aef68678bdca0b4be8a2a225 164 PRINTS PR01576 Peptide deformylase signature 38 67 2.0E-12 T 11-10-2018 IPR023635 Peptide deformylase Clos_1211 a26a4534aef68678bdca0b4be8a2a225 164 PRINTS PR01576 Peptide deformylase signature 103 121 2.0E-12 T 11-10-2018 IPR023635 Peptide deformylase Clos_1211 a26a4534aef68678bdca0b4be8a2a225 164 Pfam PF01327 Polypeptide deformylase 3 153 3.6E-35 T 11-10-2018 IPR023635 Peptide deformylase Clos_1211 a26a4534aef68678bdca0b4be8a2a225 164 SUPERFAMILY SSF56420 1 157 2.22E-38 T 11-10-2018 IPR036821 Peptide deformylase superfamily Clos_0304 a0ecba8c9bf7e8749207e9b11bacbce9 255 SMART SM00382 36 229 1.5E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0304 a0ecba8c9bf7e8749207e9b11bacbce9 255 SUPERFAMILY SSF52540 6 219 2.05E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0304 a0ecba8c9bf7e8749207e9b11bacbce9 255 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0304 a0ecba8c9bf7e8749207e9b11bacbce9 255 Pfam PF00005 ABC transporter 27 166 8.7E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0304 a0ecba8c9bf7e8749207e9b11bacbce9 255 Gene3D G3DSA:3.40.50.300 2 252 4.7E-66 T 11-10-2018 Clos_1453 f5720d2e0d13dc61c41b830a21396d8b 316 Pfam PF03060 Nitronate monooxygenase 81 299 8.0E-53 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Clos_1453 f5720d2e0d13dc61c41b830a21396d8b 316 Pfam PF03060 Nitronate monooxygenase 4 76 3.5E-21 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Clos_1453 f5720d2e0d13dc61c41b830a21396d8b 316 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 3 306 2.7E-154 T 11-10-2018 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative Clos_1453 f5720d2e0d13dc61c41b830a21396d8b 316 Gene3D G3DSA:3.20.20.70 2 311 8.1E-114 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1453 f5720d2e0d13dc61c41b830a21396d8b 316 SUPERFAMILY SSF51412 3 306 1.36E-78 T 11-10-2018 Clos_1431 09a1f628c1a13382a2c27078b7315347 445 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 443 7.6E-127 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Clos_1431 09a1f628c1a13382a2c27078b7315347 445 SUPERFAMILY SSF53335 138 444 2.9E-70 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1431 09a1f628c1a13382a2c27078b7315347 445 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 166 241 3.9E-6 T 11-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Clos_1431 09a1f628c1a13382a2c27078b7315347 445 SUPERFAMILY SSF48013 1 153 2.62E-37 T 11-10-2018 IPR035926 NusB-like superfamily Clos_1431 09a1f628c1a13382a2c27078b7315347 445 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 181 442 2.7E-66 T 11-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 Clos_1431 09a1f628c1a13382a2c27078b7315347 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 426 443 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Clos_1431 09a1f628c1a13382a2c27078b7315347 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Clos_1431 09a1f628c1a13382a2c27078b7315347 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 373 389 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Clos_1431 09a1f628c1a13382a2c27078b7315347 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 323 335 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Clos_1431 09a1f628c1a13382a2c27078b7315347 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Clos_1431 09a1f628c1a13382a2c27078b7315347 445 Pfam PF01189 16S rRNA methyltransferase RsmB/F 245 442 9.6E-63 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Clos_1431 09a1f628c1a13382a2c27078b7315347 445 Pfam PF01029 NusB family 1 125 1.9E-35 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Clos_1431 09a1f628c1a13382a2c27078b7315347 445 Gene3D G3DSA:1.10.940.10 1 143 2.4E-38 T 11-10-2018 IPR035926 NusB-like superfamily Clos_1431 09a1f628c1a13382a2c27078b7315347 445 Gene3D G3DSA:3.40.50.150 144 443 5.5E-88 T 11-10-2018 Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 1.1E-30 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 5.5E-25 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 SUPERFAMILY SSF54747 3 72 2.88E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 1.0E-14 T 11-10-2018 Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 Gene3D G3DSA:3.30.1550.10 2 71 5.0E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 SMART SM00649 9 140 3.0E-84 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.4E-63 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.322 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 SUPERFAMILY SSF46906 67 140 4.84E-27 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Clos_0480 588b9138b91c8edda54fd5bc0f6ebdf5 141 Gene3D G3DSA:1.10.10.250 72 140 4.4E-29 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Clos_2446 8cfc99c9aaf0a5cb42f5755652852c1d 277 PIRSF PIRSF000819 12 260 3.8E-67 T 11-10-2018 IPR024172 Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 Clos_2446 8cfc99c9aaf0a5cb42f5755652852c1d 277 SUPERFAMILY SSF81301 14 101 2.26E-11 T 11-10-2018 Clos_2446 8cfc99c9aaf0a5cb42f5755652852c1d 277 Pfam PF01909 Nucleotidyltransferase domain 15 97 1.1E-8 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Clos_2446 8cfc99c9aaf0a5cb42f5755652852c1d 277 Gene3D G3DSA:3.30.460.10 4 110 2.4E-8 T 11-10-2018 Clos_2446 8cfc99c9aaf0a5cb42f5755652852c1d 277 Pfam PF13427 Domain of unknown function (DUF4111) 152 253 1.3E-32 T 11-10-2018 IPR025184 Domain of unknown function DUF4111 Clos_1951 7e30876ada2c76f62ee3a4653a2c3056 422 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 328 348 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Clos_1951 7e30876ada2c76f62ee3a4653a2c3056 422 Pfam PF00860 Permease family 25 377 9.4E-82 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Clos_1951 7e30876ada2c76f62ee3a4653a2c3056 422 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 22 414 1.1E-97 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Clos_1915 d23191df3964656a46d9a8354af2a7a1 109 Pfam PF05713 Bacterial mobilisation protein (MobC) 58 98 6.3E-7 T 11-10-2018 IPR008687 Bacterial mobilisation Clos_0196 fd398a6faf53ea849c9d9172502c9a4e 271 Pfam PF00005 ABC transporter 23 171 4.8E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0196 fd398a6faf53ea849c9d9172502c9a4e 271 SMART SM00382 31 225 3.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0196 fd398a6faf53ea849c9d9172502c9a4e 271 SUPERFAMILY SSF52540 6 240 7.14E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0196 fd398a6faf53ea849c9d9172502c9a4e 271 Gene3D G3DSA:3.40.50.300 2 265 1.2E-64 T 11-10-2018 Clos_2304 5c09341e7290f3eccee7781e8389d2c3 386 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Clos_2304 5c09341e7290f3eccee7781e8389d2c3 386 Pfam PF00155 Aminotransferase class I and II 30 379 6.8E-65 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_2304 5c09341e7290f3eccee7781e8389d2c3 386 Gene3D G3DSA:3.90.1150.10 28 380 7.2E-114 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_2304 5c09341e7290f3eccee7781e8389d2c3 386 SUPERFAMILY SSF53383 10 381 9.68E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2304 5c09341e7290f3eccee7781e8389d2c3 386 Gene3D G3DSA:3.40.640.10 49 286 7.2E-114 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1114 5a260b7b1f01afd7483541c8245ee8a2 357 Gene3D G3DSA:1.20.1530.20 11 344 8.8E-26 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Clos_1114 5a260b7b1f01afd7483541c8245ee8a2 357 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 343 1.5E-115 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Clos_1114 5a260b7b1f01afd7483541c8245ee8a2 357 PIRSF PIRSF005508 1 356 2.8E-128 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Clos_1114 5a260b7b1f01afd7483541c8245ee8a2 357 Pfam PF01758 Sodium Bile acid symporter family 58 255 4.2E-46 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Clos_2728 99a452b22f3d880730bb57d6792dc620 180 SUPERFAMILY SSF55729 5 176 7.57E-47 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2728 99a452b22f3d880730bb57d6792dc620 180 Pfam PF13302 Acetyltransferase (GNAT) domain 15 153 3.3E-28 T 11-10-2018 IPR000182 GNAT domain Clos_2728 99a452b22f3d880730bb57d6792dc620 180 Gene3D G3DSA:3.40.630.30 6 172 1.1E-46 T 11-10-2018 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 PRINTS PR00992 Alanine racemase signature 165 176 4.2E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 PRINTS PR00992 Alanine racemase signature 358 371 4.2E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 PRINTS PR00992 Alanine racemase signature 282 297 4.2E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 PRINTS PR00992 Alanine racemase signature 33 49 4.2E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 PRINTS PR00992 Alanine racemase signature 208 235 4.2E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 PRINTS PR00992 Alanine racemase signature 265 280 4.2E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 PRINTS PR00992 Alanine racemase signature 69 87 4.2E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 PRINTS PR00992 Alanine racemase signature 130 142 4.2E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 PRINTS PR00992 Alanine racemase signature 303 320 4.2E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 Pfam PF00842 Alanine racemase, C-terminal domain 249 375 1.7E-42 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 SUPERFAMILY SSF50621 243 384 6.98E-48 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 Pfam PF01168 Alanine racemase, N-terminal domain 14 235 5.0E-74 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 SUPERFAMILY SSF51419 14 250 2.62E-71 T 11-10-2018 IPR029066 PLP-binding barrel Clos_2275 c388bae806c1d26e4794820f980d90a2 390 TIGRFAM TIGR00492 alr: alanine racemase 8 376 1.6E-123 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 Hamap MF_01201 Alanine racemase. 7 376 34.911 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 Gene3D G3DSA:3.20.20.10 16 231 1.6E-137 T 11-10-2018 IPR029066 PLP-binding barrel Clos_2275 c388bae806c1d26e4794820f980d90a2 390 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 Gene3D G3DSA:2.40.37.10 11 375 1.6E-137 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Clos_2275 c388bae806c1d26e4794820f980d90a2 390 SMART SM01005 249 376 4.9E-61 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_0335 02fc25dfc15f469fe12f83a3c4344c30 340 Gene3D G3DSA:2.20.28.30 52 92 3.7E-7 T 11-10-2018 Clos_0335 02fc25dfc15f469fe12f83a3c4344c30 340 Gene3D G3DSA:2.20.28.30 1 42 7.0E-6 T 11-10-2018 Clos_1684 d479f3839c05012f28e3b1672375b4a7 74 Pfam PF07866 Protein of unknown function (DUF1653) 11 71 3.7E-28 T 11-10-2018 IPR023387 DUF1653-like domain Clos_1684 d479f3839c05012f28e3b1672375b4a7 74 Gene3D G3DSA:2.30.30.320 1 74 1.4E-23 T 11-10-2018 IPR037135 DUF1653-like domain superfamily Clos_0556 47403d6d2bfb6f5220acb60bb7c98abc 325 SMART SM00909 75 167 7.8E-23 T 11-10-2018 IPR019606 GerMN domain Clos_0556 47403d6d2bfb6f5220acb60bb7c98abc 325 SMART SM00909 223 312 5.5E-17 T 11-10-2018 IPR019606 GerMN domain Clos_0556 47403d6d2bfb6f5220acb60bb7c98abc 325 Pfam PF10646 Sporulation and spore germination 52 163 3.0E-22 T 11-10-2018 IPR019606 GerMN domain Clos_0556 47403d6d2bfb6f5220acb60bb7c98abc 325 Pfam PF10646 Sporulation and spore germination 196 308 2.4E-14 T 11-10-2018 IPR019606 GerMN domain Clos_1535 92dafdff0c271bac1fbc68c97f9bef9b 243 Pfam PF01522 Polysaccharide deacetylase 69 174 1.5E-28 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Clos_1535 92dafdff0c271bac1fbc68c97f9bef9b 243 Gene3D G3DSA:3.20.20.370 40 243 4.7E-55 T 11-10-2018 Clos_1535 92dafdff0c271bac1fbc68c97f9bef9b 243 SUPERFAMILY SSF88713 45 241 1.05E-55 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Clos_0451 88f1572648cd8b997157f5bc735b7e65 170 Pfam PF14595 Thioredoxin 10 135 1.2E-39 T 11-10-2018 Clos_0451 88f1572648cd8b997157f5bc735b7e65 170 Gene3D G3DSA:3.40.30.10 2 170 4.4E-49 T 11-10-2018 Clos_0451 88f1572648cd8b997157f5bc735b7e65 170 SUPERFAMILY SSF52833 37 123 6.07E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_2202 0b6b6a47af13da07c4361cf1d2651f9f 175 Pfam PF07670 Nucleoside recognition 46 145 2.5E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_1984 a21031e53ee44ce19cb28ff782b7dbe2 645 Pfam PF07664 Ferrous iron transport protein B C terminus 432 479 3.2E-14 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Clos_1984 a21031e53ee44ce19cb28ff782b7dbe2 645 Pfam PF07670 Nucleoside recognition 318 407 2.6E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_1984 a21031e53ee44ce19cb28ff782b7dbe2 645 Pfam PF07670 Nucleoside recognition 490 613 8.5E-17 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_1984 a21031e53ee44ce19cb28ff782b7dbe2 645 Gene3D G3DSA:3.40.50.300 28 226 2.0E-43 T 11-10-2018 Clos_1984 a21031e53ee44ce19cb28ff782b7dbe2 645 SUPERFAMILY SSF52540 28 194 7.96E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1984 a21031e53ee44ce19cb28ff782b7dbe2 645 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 33 610 9.9E-117 T 11-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 Clos_1984 a21031e53ee44ce19cb28ff782b7dbe2 645 Pfam PF02421 Ferrous iron transport protein B 28 180 7.6E-60 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Clos_2786 48cf72243df845470b37de6466a71485 426 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 114 124 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Clos_2786 48cf72243df845470b37de6466a71485 426 SUPERFAMILY SSF52743 48 396 1.24E-80 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Clos_2786 48cf72243df845470b37de6466a71485 426 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 153 163 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Clos_2786 48cf72243df845470b37de6466a71485 426 Pfam PF00082 Subtilase family 109 378 1.5E-52 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Clos_2786 48cf72243df845470b37de6466a71485 426 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 330 340 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Clos_2786 48cf72243df845470b37de6466a71485 426 Gene3D G3DSA:3.40.50.200 85 388 1.2E-96 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Clos_2786 48cf72243df845470b37de6466a71485 426 PRINTS PR00723 Subtilisin serine protease family (S8) signature 329 345 3.7E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Clos_2786 48cf72243df845470b37de6466a71485 426 PRINTS PR00723 Subtilisin serine protease family (S8) signature 109 128 3.7E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Clos_2786 48cf72243df845470b37de6466a71485 426 PRINTS PR00723 Subtilisin serine protease family (S8) signature 149 162 3.7E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Clos_0405 3f3afb91843109c852048fa85d91049c 445 SUPERFAMILY SSF53383 29 429 1.63E-92 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_0405 3f3afb91843109c852048fa85d91049c 445 Pfam PF00266 Aminotransferase class-V 32 422 1.1E-92 T 11-10-2018 IPR000192 Aminotransferase class V domain Clos_0405 3f3afb91843109c852048fa85d91049c 445 Gene3D G3DSA:3.40.640.10 50 308 6.2E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0405 3f3afb91843109c852048fa85d91049c 445 Gene3D G3DSA:3.90.1150.10 22 422 6.2E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_0405 3f3afb91843109c852048fa85d91049c 445 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 224 243 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Clos_2063 0ca03917f1e2ff34811c8fc4f902f075 227 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 3 190 9.3E-63 T 11-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein Clos_2063 0ca03917f1e2ff34811c8fc4f902f075 227 Pfam PF13353 4Fe-4S single cluster domain 20 137 1.1E-11 T 11-10-2018 Clos_2063 0ca03917f1e2ff34811c8fc4f902f075 227 Pfam PF04055 Radical SAM superfamily 23 161 5.7E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_2063 0ca03917f1e2ff34811c8fc4f902f075 227 SUPERFAMILY SSF102114 18 190 4.32E-28 T 11-10-2018 Clos_2063 0ca03917f1e2ff34811c8fc4f902f075 227 Gene3D G3DSA:3.20.20.70 1 221 8.5E-39 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 422 7.7E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 SUPERFAMILY SSF55874 417 574 4.06E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 SUPERFAMILY SSF158472 288 336 1.31E-7 T 11-10-2018 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 519 3.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 533 3.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 554 3.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 SUPERFAMILY SSF47384 346 422 1.47E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 Gene3D G3DSA:3.30.450.20 124 251 3.4E-9 T 11-10-2018 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 Gene3D G3DSA:3.30.565.10 420 575 6.7E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 469 567 2.2E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 Gene3D G3DSA:1.10.287.130 346 419 5.5E-17 T 11-10-2018 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 SMART SM00387 468 576 2.5E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 Gene3D G3DSA:1.20.1480.50 252 345 2.5E-9 T 11-10-2018 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 SMART SM00304 287 339 2.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 SMART SM00388 352 426 1.7E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 Pfam PF02743 Cache domain 7 249 5.7E-19 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_0203 a33b50e5e1b910baa21203f9592ad649 584 Pfam PF00672 HAMP domain 290 335 9.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Clos_1080 199390e9051b1ca10262910c7c79df3a 205 Gene3D G3DSA:3.40.50.150 14 203 6.6E-41 T 11-10-2018 Clos_1080 199390e9051b1ca10262910c7c79df3a 205 Pfam PF08241 Methyltransferase domain 46 140 2.9E-22 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Clos_1080 199390e9051b1ca10262910c7c79df3a 205 SUPERFAMILY SSF53335 7 195 1.7E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2769 24f819fff63b5ce664201e85068dce1f 116 Gene3D G3DSA:1.10.8.290 1 116 2.2E-53 T 11-10-2018 IPR023204 SP1917 domain superfamily Clos_2769 24f819fff63b5ce664201e85068dce1f 116 Pfam PF09966 Uncharacterized protein conserved in bacteria (DUF2200) 5 115 2.2E-52 T 11-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 Clos_2769 24f819fff63b5ce664201e85068dce1f 116 PIRSF PIRSF033199 1 116 1.4E-56 T 11-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 Clos_0478 c8a493a03483eb1f76d9fea96d1c18a5 71 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 17 69 1.7E-20 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0478 c8a493a03483eb1f76d9fea96d1c18a5 71 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 18 46 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0478 c8a493a03483eb1f76d9fea96d1c18a5 71 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 16 70 4.6E-18 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Clos_0478 c8a493a03483eb1f76d9fea96d1c18a5 71 Gene3D G3DSA:1.20.5.1030 13 69 3.5E-17 T 11-10-2018 IPR038379 SecE superfamily Clos_0478 c8a493a03483eb1f76d9fea96d1c18a5 71 Hamap MF_00422 Protein translocase subunit SecE [secE]. 10 68 11.903 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Clos_0434 a33109e9741d41eac5612309eb64bd50 109 Pfam PF12986 Domain of unknown function (DUF3870) 7 97 2.7E-29 T 11-10-2018 IPR024617 Domain of unknown function DUF3870 Clos_0437 83096d4f30a20d8a98d0ca6ad3ffbe2e 132 SUPERFAMILY SSF52242 2 130 8.11E-50 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_0437 83096d4f30a20d8a98d0ca6ad3ffbe2e 132 Pfam PF02310 B12 binding domain 5 119 1.7E-21 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Clos_0437 83096d4f30a20d8a98d0ca6ad3ffbe2e 132 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 4 131 6.3E-53 T 11-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Clos_0437 83096d4f30a20d8a98d0ca6ad3ffbe2e 132 Gene3D G3DSA:3.40.50.280 1 132 2.3E-57 T 11-10-2018 Clos_0500 3abf822a72b8ae32d4085ce369d76ec4 67 SUPERFAMILY SSF46561 1 63 1.83E-23 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0500 3abf822a72b8ae32d4085ce369d76ec4 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 7.4E-26 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0500 3abf822a72b8ae32d4085ce369d76ec4 67 Gene3D G3DSA:1.10.287.310 1 67 3.5E-30 T 11-10-2018 Clos_0500 3abf822a72b8ae32d4085ce369d76ec4 67 Pfam PF00831 Ribosomal L29 protein 4 59 3.1E-27 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0500 3abf822a72b8ae32d4085ce369d76ec4 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0500 3abf822a72b8ae32d4085ce369d76ec4 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.262 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_2313 7cbf0e7448845508065e513a19285b77 369 Gene3D G3DSA:3.30.300.210 219 364 1.7E-15 T 11-10-2018 IPR038501 Spore germination GerAC superfamily Clos_2313 7cbf0e7448845508065e513a19285b77 369 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 364 1.0E-72 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Clos_2313 7cbf0e7448845508065e513a19285b77 369 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 205 359 2.0E-22 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Clos_1353 6018ae483a0b6dc30594ad63851482a2 180 Gene3D G3DSA:3.40.50.2020 1 180 1.5E-68 T 11-10-2018 Clos_1353 6018ae483a0b6dc30594ad63851482a2 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 173 1.2E-68 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Clos_1353 6018ae483a0b6dc30594ad63851482a2 180 SUPERFAMILY SSF53271 2 178 5.64E-59 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_1353 6018ae483a0b6dc30594ad63851482a2 180 Pfam PF00156 Phosphoribosyl transferase domain 9 160 3.6E-25 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Clos_1930 cbf68d03fe5cb7b3e92ef66cfd368f2f 144 SUPERFAMILY SSF55729 31 128 3.42E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1930 cbf68d03fe5cb7b3e92ef66cfd368f2f 144 Gene3D G3DSA:3.40.630.30 9 133 2.1E-11 T 11-10-2018 Clos_1930 cbf68d03fe5cb7b3e92ef66cfd368f2f 144 Pfam PF00583 Acetyltransferase (GNAT) family 36 124 1.3E-6 T 11-10-2018 IPR000182 GNAT domain Clos_2460 172f3f3643192905c6daa8412d259307 272 Pfam PF03780 Asp23 family, cell envelope-related function 212 268 9.7E-8 T 11-10-2018 IPR005531 Alkaline shock protein Asp23 Clos_2460 172f3f3643192905c6daa8412d259307 272 SUPERFAMILY SSF52540 2 102 2.17E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2225 f47be0f765c3caa20afef9af9562215d 182 Pfam PF11193 Protein of unknown function (DUF2812) 14 120 7.2E-29 T 11-10-2018 IPR021359 Protein of unknown function DUF2812 Clos_2311 1325ec8384fe809c10f06370582ac803 386 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 25 379 7.0E-55 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Clos_2311 1325ec8384fe809c10f06370582ac803 386 Pfam PF03845 Spore germination protein 31 332 2.2E-21 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Clos_0272 ed5a95e423b5ecf821a11aaf6a815b1a 65 Gene3D G3DSA:1.10.260.40 2 65 3.8E-15 T 11-10-2018 Clos_0272 ed5a95e423b5ecf821a11aaf6a815b1a 65 Pfam PF01381 Helix-turn-helix 7 62 1.6E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_0272 ed5a95e423b5ecf821a11aaf6a815b1a 65 SMART SM00530 6 62 1.8E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_0272 ed5a95e423b5ecf821a11aaf6a815b1a 65 SUPERFAMILY SSF47413 3 63 8.16E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_0020 9d0163e7fb252e2e437d5fc97232feba 423 Pfam PF13349 Putative adhesin 170 386 7.3E-15 T 11-10-2018 IPR025164 Putative adhesin Clos_0167 ea39824b4922c447c031ddd3bb2fffcf 519 SUPERFAMILY SSF100950 276 517 2.93E-72 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_0167 ea39824b4922c447c031ddd3bb2fffcf 519 Gene3D G3DSA:3.40.1080.10 276 519 8.4E-103 T 11-10-2018 Clos_0167 ea39824b4922c447c031ddd3bb2fffcf 519 Gene3D G3DSA:3.40.1080.10 1 269 2.3E-92 T 11-10-2018 Clos_0167 ea39824b4922c447c031ddd3bb2fffcf 519 Pfam PF01144 Coenzyme A transferase 8 243 5.7E-33 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Clos_0167 ea39824b4922c447c031ddd3bb2fffcf 519 PIRSF PIRSF000858 1 519 5.6E-197 T 11-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 Clos_0167 ea39824b4922c447c031ddd3bb2fffcf 519 SMART SM00882 282 490 4.4E-4 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Clos_0167 ea39824b4922c447c031ddd3bb2fffcf 519 SMART SM00882 4 244 1.1E-50 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Clos_0167 ea39824b4922c447c031ddd3bb2fffcf 519 SUPERFAMILY SSF100950 2 258 2.79E-77 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_1320 a4e0b254d4ab8cd0414df962301c4fc2 156 SUPERFAMILY SSF102712 77 123 5.36E-5 T 11-10-2018 Clos_1320 a4e0b254d4ab8cd0414df962301c4fc2 156 Pfam PF04002 RadC-like JAB domain 30 145 4.3E-32 T 11-10-2018 IPR025657 RadC-like JAB domain Clos_1320 a4e0b254d4ab8cd0414df962301c4fc2 156 Gene3D G3DSA:3.40.140.10 23 146 3.7E-31 T 11-10-2018 Clos_1320 a4e0b254d4ab8cd0414df962301c4fc2 156 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 96 101 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Clos_2115 ce4260f8d0edd1720a69a097c8e9e295 106 Gene3D G3DSA:2.20.25.270 14 76 1.1E-8 T 11-10-2018 Clos_1547 554113c55393c46773af9c6506a70138 540 ProSitePatterns PS01095 Chitinases family 18 active site. 130 138 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 Clos_1547 554113c55393c46773af9c6506a70138 540 Pfam PF00395 S-layer homology domain 484 527 2.0E-11 T 11-10-2018 IPR001119 S-layer homology domain Clos_1547 554113c55393c46773af9c6506a70138 540 Pfam PF00395 S-layer homology domain 358 399 3.4E-8 T 11-10-2018 IPR001119 S-layer homology domain Clos_1547 554113c55393c46773af9c6506a70138 540 Pfam PF00395 S-layer homology domain 420 463 8.3E-13 T 11-10-2018 IPR001119 S-layer homology domain Clos_1547 554113c55393c46773af9c6506a70138 540 Pfam PF00704 Glycosyl hydrolases family 18 39 340 5.4E-39 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Clos_1547 554113c55393c46773af9c6506a70138 540 Gene3D G3DSA:3.20.20.80 56 346 1.6E-93 T 11-10-2018 Clos_1547 554113c55393c46773af9c6506a70138 540 SMART SM00636 32 341 1.4E-27 T 11-10-2018 IPR011583 Chitinase II GO:0008061 Clos_1547 554113c55393c46773af9c6506a70138 540 Gene3D G3DSA:3.10.50.10 243 312 1.6E-93 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily Clos_1547 554113c55393c46773af9c6506a70138 540 SUPERFAMILY SSF51445 46 349 2.64E-49 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Clos_2031 1515dee5abbf3ab2c575703aaba6038d 611 Pfam PF09369 Domain of unknown function (DUF1998) 468 571 3.5E-8 T 11-10-2018 IPR018973 DEAD/DEAH-box helicase, putative Clos_1781 599909a79c749486cdbefbfcc1fc087e 119 Pfam PF01925 Sulfite exporter TauE/SafE 3 109 1.1E-16 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Clos_1548 dc639d135311b1eb7cf8d9f1df4fb07c 405 Pfam PF00589 Phage integrase family 204 390 1.4E-29 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Clos_1548 dc639d135311b1eb7cf8d9f1df4fb07c 405 Gene3D G3DSA:1.10.443.10 215 397 3.3E-37 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Clos_1548 dc639d135311b1eb7cf8d9f1df4fb07c 405 SUPERFAMILY SSF56349 203 397 2.24E-32 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Clos_1548 dc639d135311b1eb7cf8d9f1df4fb07c 405 Gene3D G3DSA:1.10.150.130 67 200 1.8E-9 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Clos_2790 2235fde2cac6fb1d6162d5a160c467e9 373 Pfam PF00072 Response regulator receiver domain 4 114 2.0E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2790 2235fde2cac6fb1d6162d5a160c467e9 373 SMART SM00448 1 113 3.5E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_2790 2235fde2cac6fb1d6162d5a160c467e9 373 Gene3D G3DSA:1.10.10.10 128 227 4.2E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2790 2235fde2cac6fb1d6162d5a160c467e9 373 SUPERFAMILY SSF46894 143 217 9.64E-9 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Clos_2790 2235fde2cac6fb1d6162d5a160c467e9 373 SUPERFAMILY SSF52172 2 165 2.99E-25 T 11-10-2018 IPR011006 CheY-like superfamily Clos_2790 2235fde2cac6fb1d6162d5a160c467e9 373 Gene3D G3DSA:3.40.50.2300 1 127 7.4E-26 T 11-10-2018 Clos_2639 d78f4040c26699605deb999977301bc8 532 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 363 505 2.6E-29 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Clos_2639 d78f4040c26699605deb999977301bc8 532 Pfam PF01943 Polysaccharide biosynthesis protein 6 311 4.9E-40 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Clos_2639 d78f4040c26699605deb999977301bc8 532 PIRSF PIRSF038958 1 523 4.3E-148 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 Gene3D G3DSA:3.40.50.1980 31 218 1.4E-59 T 11-10-2018 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 Pfam PF01297 Zinc-uptake complex component A periplasmic 44 329 3.4E-82 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 PRINTS PR00691 Adhesin B signature 66 84 2.8E-11 T 11-10-2018 IPR006129 Adhesin B GO:0007155 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 PRINTS PR00691 Adhesin B signature 85 104 2.8E-11 T 11-10-2018 IPR006129 Adhesin B GO:0007155 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 PRINTS PR00691 Adhesin B signature 309 327 2.8E-11 T 11-10-2018 IPR006129 Adhesin B GO:0007155 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 PRINTS PR00691 Adhesin B signature 41 62 2.8E-11 T 11-10-2018 IPR006129 Adhesin B GO:0007155 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 SUPERFAMILY SSF53807 42 330 8.34E-90 T 11-10-2018 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 Gene3D G3DSA:3.40.50.1980 219 332 9.7E-42 T 11-10-2018 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 PRINTS PR00690 Adhesin family signature 41 59 2.7E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 PRINTS PR00690 Adhesin family signature 72 85 2.7E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 PRINTS PR00690 Adhesin family signature 85 102 2.7E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Clos_2136 8231314e37aa53f61c876bd6f331bbc8 332 PRINTS PR00690 Adhesin family signature 269 287 2.7E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Clos_1204 61195db916720f5d1564453c8641bbcc 191 SUPERFAMILY SSF88946 4 102 4.24E-29 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1204 61195db916720f5d1564453c8641bbcc 191 Gene3D G3DSA:1.10.1740.10 2 120 3.6E-31 T 11-10-2018 Clos_1204 61195db916720f5d1564453c8641bbcc 191 Pfam PF04542 Sigma-70 region 2 23 90 3.9E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_1204 61195db916720f5d1564453c8641bbcc 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 182 2.6E-39 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_1204 61195db916720f5d1564453c8641bbcc 191 Gene3D G3DSA:1.10.10.10 121 188 2.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1204 61195db916720f5d1564453c8641bbcc 191 Pfam PF08281 Sigma-70, region 4 131 180 6.8E-18 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_1204 61195db916720f5d1564453c8641bbcc 191 SUPERFAMILY SSF88659 109 187 2.43E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_2841 e91ef280cd39f7bc149ec9ae8d54cbf9 302 Gene3D G3DSA:1.20.1530.20 157 302 2.7E-5 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Clos_2841 e91ef280cd39f7bc149ec9ae8d54cbf9 302 Pfam PF03547 Membrane transport protein 158 298 6.7E-11 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Clos_2841 e91ef280cd39f7bc149ec9ae8d54cbf9 302 Pfam PF03547 Membrane transport protein 6 151 9.3E-22 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Clos_1452 ef34ee73acab7c7cfae45cf8223b2071 331 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 329 72.758 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Clos_1452 ef34ee73acab7c7cfae45cf8223b2071 331 Gene3D G3DSA:3.40.47.10 4 331 3.5E-139 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_1452 ef34ee73acab7c7cfae45cf8223b2071 331 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 188 2.2E-33 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Clos_1452 ef34ee73acab7c7cfae45cf8223b2071 331 SUPERFAMILY SSF53901 7 329 2.11E-69 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Clos_1452 ef34ee73acab7c7cfae45cf8223b2071 331 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 329 5.5E-133 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Clos_1452 ef34ee73acab7c7cfae45cf8223b2071 331 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 241 329 2.0E-36 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Clos_2596 155611f9589ffb9fdd62cdacbf29cfd1 214 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 209 3.4E-57 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Clos_2596 155611f9589ffb9fdd62cdacbf29cfd1 214 Hamap MF_00494 Probable transaldolase [tal]. 1 214 47.706 T 11-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Clos_2596 155611f9589ffb9fdd62cdacbf29cfd1 214 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Clos_2596 155611f9589ffb9fdd62cdacbf29cfd1 214 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 8.5E-94 T 11-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Clos_2596 155611f9589ffb9fdd62cdacbf29cfd1 214 Gene3D G3DSA:3.20.20.70 1 214 2.2E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2596 155611f9589ffb9fdd62cdacbf29cfd1 214 SUPERFAMILY SSF51569 2 212 1.47E-78 T 11-10-2018 Clos_2596 155611f9589ffb9fdd62cdacbf29cfd1 214 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Clos_0760 5d64e9f0ccb046b0d4954635090ffedf 597 Pfam PF06100 MCRA family 32 531 4.7E-206 T 11-10-2018 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 Clos_0760 5d64e9f0ccb046b0d4954635090ffedf 597 Gene3D G3DSA:3.50.50.60 459 548 3.4E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0760 5d64e9f0ccb046b0d4954635090ffedf 597 Gene3D G3DSA:3.50.50.60 10 140 2.2E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0760 5d64e9f0ccb046b0d4954635090ffedf 597 Gene3D G3DSA:3.50.50.60 165 379 3.3E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0760 5d64e9f0ccb046b0d4954635090ffedf 597 SUPERFAMILY SSF51905 37 264 5.07E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_2625 c742fb64e40839efc05973c07320eb3d 405 Pfam PF00872 Transposase, Mutator family 23 381 2.0E-112 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Clos_2625 c742fb64e40839efc05973c07320eb3d 405 ProSitePatterns PS01007 Transposases, Mutator family, signature. 235 259 - T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Clos_1654 0bea00ebb468d9ba1abcae61d4840c17 559 SUPERFAMILY SSF56601 227 555 7.82E-84 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_1654 0bea00ebb468d9ba1abcae61d4840c17 559 SUPERFAMILY SSF56519 55 207 5.62E-20 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Clos_1654 0bea00ebb468d9ba1abcae61d4840c17 559 Gene3D G3DSA:3.90.1310.30 56 216 1.7E-20 T 11-10-2018 Clos_1654 0bea00ebb468d9ba1abcae61d4840c17 559 Pfam PF00905 Penicillin binding protein transpeptidase domain 244 550 1.4E-61 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Clos_1654 0bea00ebb468d9ba1abcae61d4840c17 559 Pfam PF03717 Penicillin-binding Protein dimerisation domain 63 173 2.9E-7 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Clos_1654 0bea00ebb468d9ba1abcae61d4840c17 559 Gene3D G3DSA:3.40.710.10 221 558 1.4E-90 T 11-10-2018 Clos_2339 ae8b41910753d491fad3042e94223c13 342 PIRSF PIRSF017617 1 342 6.0E-131 T 11-10-2018 IPR023603 Threonine aldolase Clos_2339 ae8b41910753d491fad3042e94223c13 342 SUPERFAMILY SSF53383 3 341 2.24E-115 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2339 ae8b41910753d491fad3042e94223c13 342 Gene3D G3DSA:3.90.1150.10 247 342 2.3E-22 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_2339 ae8b41910753d491fad3042e94223c13 342 Gene3D G3DSA:3.40.640.10 1 246 3.5E-91 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_2339 ae8b41910753d491fad3042e94223c13 342 Pfam PF01212 Beta-eliminating lyase 5 286 5.6E-97 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Clos_2838 216cdc68851051eef17add18435a9135 125 SUPERFAMILY SSF47413 2 69 2.53E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_2838 216cdc68851051eef17add18435a9135 125 Gene3D G3DSA:1.10.260.40 1 66 7.6E-16 T 11-10-2018 Clos_2838 216cdc68851051eef17add18435a9135 125 Pfam PF12844 Helix-turn-helix domain 5 67 2.2E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_2838 216cdc68851051eef17add18435a9135 125 SMART SM00530 7 62 1.2E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1331 0e20b654a9d1f82581f1d1785b23c351 213 SUPERFAMILY SSF100950 10 161 7.53E-8 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Clos_1331 0e20b654a9d1f82581f1d1785b23c351 213 Pfam PF02589 LUD domain 13 207 2.5E-63 T 11-10-2018 IPR003741 LUD domain Clos_1331 0e20b654a9d1f82581f1d1785b23c351 213 PIRSF PIRSF020269 1 213 2.2E-88 T 11-10-2018 IPR009501 Uncharacterised conserved protein UCP020269 Clos_2424 60fbf4c3cfb20ae2c413f7dd3450b648 226 Gene3D G3DSA:3.30.240.20 78 150 4.1E-26 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Clos_2424 60fbf4c3cfb20ae2c413f7dd3450b648 226 Pfam PF04239 Protein of unknown function (DUF421) 86 203 6.8E-36 T 11-10-2018 IPR007353 Protein of unknown function DUF421 Clos_2424 60fbf4c3cfb20ae2c413f7dd3450b648 226 Gene3D G3DSA:3.30.240.20 167 225 1.1E-18 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Clos_1406 7350dbcaf63648c959cfee57d9997ad2 432 Gene3D G3DSA:2.40.50.100 68 271 1.0E-5 T 11-10-2018 Clos_1406 7350dbcaf63648c959cfee57d9997ad2 432 Gene3D G3DSA:1.10.287.470 100 209 1.0E-5 T 11-10-2018 Clos_1406 7350dbcaf63648c959cfee57d9997ad2 432 Gene3D G3DSA:2.40.30.170 57 343 1.0E-5 T 11-10-2018 Clos_1406 7350dbcaf63648c959cfee57d9997ad2 432 Gene3D G3DSA:2.40.420.20 52 393 1.0E-5 T 11-10-2018 Clos_1478 f4390bed1f223caf454709d6705d00e4 99 Pfam PF02049 Flagellar hook-basal body complex protein FliE 16 99 1.4E-29 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Clos_1478 f4390bed1f223caf454709d6705d00e4 99 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 7 99 6.7E-22 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Clos_1478 f4390bed1f223caf454709d6705d00e4 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 63 79 5.3E-13 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Clos_1478 f4390bed1f223caf454709d6705d00e4 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 84 97 5.3E-13 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Clos_1478 f4390bed1f223caf454709d6705d00e4 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 29 45 5.3E-13 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Clos_1478 f4390bed1f223caf454709d6705d00e4 99 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 99 18.194 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Clos_2863 2bab9cce78f79b6237d05cd463e9a6b5 86 Pfam PF03698 Uncharacterised protein family (UPF0180) 2 79 8.6E-21 T 11-10-2018 IPR005370 Uncharacterised protein family UPF0180 Clos_1422 1a497b88df2f73040053b6a904f3a6c8 93 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 1.0E-34 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A Clos_1422 1a497b88df2f73040053b6a904f3a6c8 93 Hamap MF_01503 UPF0296 protein . 3 88 29.962 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A Clos_1422 1a497b88df2f73040053b6a904f3a6c8 93 Pfam PF04025 Domain of unknown function (DUF370) 5 77 2.9E-37 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A Clos_0259 069ebaeacd22209cb6555a040a8fde2b 287 Pfam PF00892 EamA-like transporter family 146 274 4.6E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_0259 069ebaeacd22209cb6555a040a8fde2b 287 Pfam PF00892 EamA-like transporter family 6 134 2.9E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_0259 069ebaeacd22209cb6555a040a8fde2b 287 SUPERFAMILY SSF103481 39 138 4.58E-16 T 11-10-2018 Clos_0259 069ebaeacd22209cb6555a040a8fde2b 287 SUPERFAMILY SSF103481 181 275 7.45E-12 T 11-10-2018 Clos_2693 f86f9763a3c3a73ac9289d31daf66b9e 209 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 209 29.82 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2693 f86f9763a3c3a73ac9289d31daf66b9e 209 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 204 2.1E-70 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2693 f86f9763a3c3a73ac9289d31daf66b9e 209 Pfam PF02581 Thiamine monophosphate synthase 11 191 4.6E-67 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2693 f86f9763a3c3a73ac9289d31daf66b9e 209 SUPERFAMILY SSF51391 6 206 5.23E-68 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_2693 f86f9763a3c3a73ac9289d31daf66b9e 209 Gene3D G3DSA:3.20.20.70 1 209 2.0E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0538 416c530c30ecc5f255ff6aa993816cd1 468 Gene3D G3DSA:3.60.20.10 20 464 4.2E-161 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Clos_0538 416c530c30ecc5f255ff6aa993816cd1 468 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 20 463 7.3E-160 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Clos_0538 416c530c30ecc5f255ff6aa993816cd1 468 SUPERFAMILY SSF56235 20 250 1.89E-64 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Clos_0538 416c530c30ecc5f255ff6aa993816cd1 468 Pfam PF13537 Glutamine amidotransferase domain 100 220 6.2E-22 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Clos_0538 416c530c30ecc5f255ff6aa993816cd1 468 PIRSF PIRSF000485 16 468 7.3E-172 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Clos_0538 416c530c30ecc5f255ff6aa993816cd1 468 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 19 462 46.836 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Clos_0538 416c530c30ecc5f255ff6aa993816cd1 468 Pfam PF00156 Phosphoribosyl transferase domain 279 392 5.0E-11 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Clos_0538 416c530c30ecc5f255ff6aa993816cd1 468 SUPERFAMILY SSF53271 257 466 8.78E-69 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_0538 416c530c30ecc5f255ff6aa993816cd1 468 Gene3D G3DSA:3.40.50.2020 281 445 4.2E-161 T 11-10-2018 Clos_0578 d4c9c66e34ffb2136a55f8692cbf6d6a 320 Pfam PF14527 WhiA LAGLIDADG-like domain 133 224 8.7E-35 T 11-10-2018 IPR039518 WhiA, LAGLIDADG-like domain Clos_0578 d4c9c66e34ffb2136a55f8692cbf6d6a 320 Gene3D G3DSA:3.10.28.10 1 222 1.2E-61 T 11-10-2018 IPR027434 Homing endonuclease Clos_0578 d4c9c66e34ffb2136a55f8692cbf6d6a 320 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 5 310 2.7E-107 T 11-10-2018 IPR033981 Sporulation regulator WhiA-like Clos_0578 d4c9c66e34ffb2136a55f8692cbf6d6a 320 Gene3D G3DSA:1.10.10.10 223 315 4.7E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0578 d4c9c66e34ffb2136a55f8692cbf6d6a 320 SUPERFAMILY SSF55608 124 228 7.65E-17 T 11-10-2018 IPR027434 Homing endonuclease Clos_0578 d4c9c66e34ffb2136a55f8692cbf6d6a 320 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 313 35.796 T 11-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 Clos_0578 d4c9c66e34ffb2136a55f8692cbf6d6a 320 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 108 1.5E-31 T 11-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain Clos_0578 d4c9c66e34ffb2136a55f8692cbf6d6a 320 Pfam PF02650 WhiA C-terminal HTH domain 227 310 1.2E-37 T 11-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal Clos_0690 ec0b8773e15425f9a7cafa469a110168 230 Pfam PF00849 RNA pseudouridylate synthase 13 168 5.9E-34 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0690 ec0b8773e15425f9a7cafa469a110168 230 SUPERFAMILY SSF55120 5 216 1.92E-51 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Clos_0690 ec0b8773e15425f9a7cafa469a110168 230 Gene3D G3DSA:3.30.2350.10 1 214 1.7E-56 T 11-10-2018 Clos_2853 ff1672ff9b9ba735f6eb3bde05b9b4b6 143 Pfam PF04657 Putative inner membrane exporter, YdcZ 3 137 1.7E-31 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Clos_0934 40e4191d4d91712fe52a59b4a19188d0 232 SMART SM00382 25 194 1.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0934 40e4191d4d91712fe52a59b4a19188d0 232 SUPERFAMILY SSF52540 1 206 1.23E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0934 40e4191d4d91712fe52a59b4a19188d0 232 Pfam PF00005 ABC transporter 16 144 4.1E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0934 40e4191d4d91712fe52a59b4a19188d0 232 Gene3D G3DSA:3.40.50.300 1 228 1.2E-51 T 11-10-2018 Clos_0725 d9986293b5e28ee2ae7f57e0fe673977 450 SUPERFAMILY SSF50249 1 58 9.0E-7 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0725 d9986293b5e28ee2ae7f57e0fe673977 450 Gene3D G3DSA:2.40.50.140 1 77 3.6E-12 T 11-10-2018 Clos_0725 d9986293b5e28ee2ae7f57e0fe673977 450 SUPERFAMILY SSF53335 68 449 4.51E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0725 d9986293b5e28ee2ae7f57e0fe673977 450 Gene3D G3DSA:3.40.1350.30 124 284 2.4E-109 T 11-10-2018 Clos_0725 d9986293b5e28ee2ae7f57e0fe673977 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 255 449 6.3E-21 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Clos_0725 d9986293b5e28ee2ae7f57e0fe673977 450 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 19 442 1.6E-92 T 11-10-2018 Clos_0725 d9986293b5e28ee2ae7f57e0fe673977 450 Gene3D G3DSA:3.40.50.150 79 444 2.4E-109 T 11-10-2018 Clos_0725 d9986293b5e28ee2ae7f57e0fe673977 450 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 380 411 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site Clos_0104 92919102e0966be71ddc72ffa8ef853a 61 Pfam PF13783 Domain of unknown function (DUF4177) 2 58 3.4E-18 T 11-10-2018 IPR025234 Protein of unknown function DUF4177 Clos_0440 ead55aa9dacbefb9044ab1b4282e711f 515 SUPERFAMILY SSF52096 224 514 1.08E-93 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_0440 ead55aa9dacbefb9044ab1b4282e711f 515 Gene3D G3DSA:3.90.226.10 259 515 4.4E-93 T 11-10-2018 Clos_0440 ead55aa9dacbefb9044ab1b4282e711f 515 SUPERFAMILY SSF52096 4 255 1.93E-81 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_0440 ead55aa9dacbefb9044ab1b4282e711f 515 Pfam PF01039 Carboxyl transferase domain 28 513 1.9E-203 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Clos_0440 ead55aa9dacbefb9044ab1b4282e711f 515 Gene3D G3DSA:3.90.226.10 1 257 3.1E-96 T 11-10-2018 Clos_2478 5746b8b47bffe0b6d64dcad112e2ddc9 161 Gene3D G3DSA:1.20.120.340 2 119 7.1E-24 T 11-10-2018 Clos_2478 5746b8b47bffe0b6d64dcad112e2ddc9 161 TIGRFAM TIGR00208 fliS: flagellar protein FliS 5 113 3.8E-17 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Clos_2478 5746b8b47bffe0b6d64dcad112e2ddc9 161 Pfam PF02561 Flagellar protein FliS 4 113 2.3E-24 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Clos_2478 5746b8b47bffe0b6d64dcad112e2ddc9 161 SUPERFAMILY SSF101116 4 117 1.96E-24 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 Gene3D G3DSA:3.50.50.60 5 278 2.3E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0654 731c525a0d70137e3259e132f7c58faa 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 4.1E-27 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 137 4.1E-27 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 4.1E-27 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 264 4.1E-27 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 4.1E-27 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 4.1E-27 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 271 1.8E-18 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 258 3.6E-15 T 11-10-2018 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.6E-15 T 11-10-2018 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 3.6E-15 T 11-10-2018 Clos_0654 731c525a0d70137e3259e132f7c58faa 299 SUPERFAMILY SSF51905 1 285 2.42E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0654 731c525a0d70137e3259e132f7c58faa 299 Gene3D G3DSA:3.50.50.60 115 219 2.3E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0910 eb343742a3536d1f63f860cf8e1ace1e 210 PIRSF PIRSF001435 1 210 3.8E-59 T 11-10-2018 Clos_0910 eb343742a3536d1f63f860cf8e1ace1e 210 TIGRFAM TIGR01083 nth: endonuclease III 4 193 2.5E-79 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Clos_0910 eb343742a3536d1f63f860cf8e1ace1e 210 Hamap MF_00942 Endonuclease III [nth]. 1 208 37.444 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Clos_0910 eb343742a3536d1f63f860cf8e1ace1e 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 164 1.3E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Clos_0910 eb343742a3536d1f63f860cf8e1ace1e 210 SMART SM00478 37 184 1.2E-48 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Clos_0910 eb343742a3536d1f63f860cf8e1ace1e 210 Gene3D G3DSA:1.10.1670.10 15 202 1.6E-76 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Clos_0910 eb343742a3536d1f63f860cf8e1ace1e 210 SUPERFAMILY SSF48150 7 206 1.02E-69 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Clos_0910 eb343742a3536d1f63f860cf8e1ace1e 210 Gene3D G3DSA:1.10.340.30 20 131 1.6E-76 T 11-10-2018 Clos_0910 eb343742a3536d1f63f860cf8e1ace1e 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 186 202 5.0E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Clos_2811 2b4549292ea9cc2803a06ea7d4fdb7ef 340 Pfam PF01032 FecCD transport family 19 337 8.8E-88 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_2811 2b4549292ea9cc2803a06ea7d4fdb7ef 340 SUPERFAMILY SSF81345 6 337 5.89E-77 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2811 2b4549292ea9cc2803a06ea7d4fdb7ef 340 Gene3D G3DSA:1.10.3470.10 7 340 3.7E-94 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2454 c90101b11065048fd8b8baee439152eb 240 Pfam PF00005 ABC transporter 20 162 2.4E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2454 c90101b11065048fd8b8baee439152eb 240 SUPERFAMILY SSF52540 2 224 5.55E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2454 c90101b11065048fd8b8baee439152eb 240 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2454 c90101b11065048fd8b8baee439152eb 240 Gene3D G3DSA:3.40.50.300 1 239 3.6E-64 T 11-10-2018 Clos_2454 c90101b11065048fd8b8baee439152eb 240 SMART SM00382 28 219 1.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1990 ebdef8c05dea3163a4cb5a498b1a4af1 133 SUPERFAMILY SSF55729 12 130 5.23E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1990 ebdef8c05dea3163a4cb5a498b1a4af1 133 Pfam PF00583 Acetyltransferase (GNAT) family 24 121 3.5E-12 T 11-10-2018 IPR000182 GNAT domain Clos_1990 ebdef8c05dea3163a4cb5a498b1a4af1 133 Gene3D G3DSA:3.40.630.30 4 130 5.1E-34 T 11-10-2018 Clos_2389 cf4200d59e007f6bcf1efdcb7d10bbb4 217 SUPERFAMILY SSF51182 91 213 1.74E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Clos_2389 cf4200d59e007f6bcf1efdcb7d10bbb4 217 Pfam PF06249 Ethanolamine utilisation protein EutQ 66 214 3.7E-38 T 11-10-2018 IPR010424 Ethanolamine utilisation EutQ Clos_2389 cf4200d59e007f6bcf1efdcb7d10bbb4 217 Gene3D G3DSA:2.60.120.10 82 216 1.4E-47 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Clos_2329 d126ed60a1e99326084848700fbe9cf2 334 SUPERFAMILY SSF81345 12 334 3.14E-83 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2329 d126ed60a1e99326084848700fbe9cf2 334 Gene3D G3DSA:1.10.3470.10 13 334 6.6E-97 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2329 d126ed60a1e99326084848700fbe9cf2 334 Pfam PF01032 FecCD transport family 30 334 5.6E-94 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_1477 65eba244454d3344f8f89079831de89e 147 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 147 6.1E-54 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Clos_1477 65eba244454d3344f8f89079831de89e 147 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 94 143 2.8E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clos_1477 65eba244454d3344f8f89079831de89e 147 Pfam PF00460 Flagella basal body rod protein 7 34 3.2E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Clos_1028 4a11d6ee88cc8a115c5a48c7d67fd09f 75 SUPERFAMILY SSF64307 4 73 1.18E-19 T 11-10-2018 IPR036868 TusA-like domain superfamily Clos_1028 4a11d6ee88cc8a115c5a48c7d67fd09f 75 Gene3D G3DSA:3.30.110.40 1 73 2.9E-17 T 11-10-2018 IPR036868 TusA-like domain superfamily Clos_1028 4a11d6ee88cc8a115c5a48c7d67fd09f 75 Pfam PF01206 Sulfurtransferase TusA 5 73 3.7E-21 T 11-10-2018 IPR001455 TusA-like domain Clos_1170 3c60e486beada05edbd3c05d39f929ec 268 Gene3D G3DSA:2.60.200.30 107 246 7.7E-74 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Clos_1170 3c60e486beada05edbd3c05d39f929ec 268 SUPERFAMILY SSF111331 17 267 9.42E-63 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Clos_1170 3c60e486beada05edbd3c05d39f929ec 268 Gene3D G3DSA:3.40.50.10330 38 268 7.7E-74 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Clos_1170 3c60e486beada05edbd3c05d39f929ec 268 Hamap MF_00361 NAD kinase [nadK]. 5 268 24.845 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Clos_1170 3c60e486beada05edbd3c05d39f929ec 268 Pfam PF01513 ATP-NAD kinase 30 233 3.4E-41 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Clos_2442 233d18efe4f172894eda6e9db5c339e8 256 SUPERFAMILY SSF102198 1 254 1.01E-58 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_2442 233d18efe4f172894eda6e9db5c339e8 256 Pfam PF04199 Putative cyclase 4 184 4.0E-40 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_2442 233d18efe4f172894eda6e9db5c339e8 256 Gene3D G3DSA:3.50.30.50 1 256 1.6E-55 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_2788 08c79a016ba9bad5e2bf46f6e76e2de7 302 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 132 297 1.1E-48 T 11-10-2018 IPR000160 GGDEF domain Clos_2788 08c79a016ba9bad5e2bf46f6e76e2de7 302 Gene3D G3DSA:3.30.70.270 129 299 5.8E-46 T 11-10-2018 Clos_2788 08c79a016ba9bad5e2bf46f6e76e2de7 302 SUPERFAMILY SSF55073 140 296 1.57E-41 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_2788 08c79a016ba9bad5e2bf46f6e76e2de7 302 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 293 8.1E-42 T 11-10-2018 IPR000160 GGDEF domain Clos_2788 08c79a016ba9bad5e2bf46f6e76e2de7 302 SMART SM00267 124 297 1.5E-40 T 11-10-2018 IPR000160 GGDEF domain Clos_0078 02e5feb6e809b62c8d76f8c978744270 298 Pfam PF02219 Methylenetetrahydrofolate reductase 3 282 3.4E-81 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Clos_0078 02e5feb6e809b62c8d76f8c978744270 298 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 14 284 8.0E-94 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Clos_0078 02e5feb6e809b62c8d76f8c978744270 298 Gene3D G3DSA:3.20.20.220 2 296 4.0E-96 T 11-10-2018 Clos_0078 02e5feb6e809b62c8d76f8c978744270 298 SUPERFAMILY SSF51730 1 285 5.89E-88 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like Clos_2669 3fc5c54286adc6c84055acbd3a33a099 255 SUPERFAMILY SSF53335 17 200 2.61E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2669 3fc5c54286adc6c84055acbd3a33a099 255 Gene3D G3DSA:3.40.50.150 9 252 2.9E-69 T 11-10-2018 Clos_2669 3fc5c54286adc6c84055acbd3a33a099 255 Pfam PF05175 Methyltransferase small domain 35 172 7.3E-14 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Clos_1268 de1cc2e944fa6f72e2d2abb8ed72942c 771 Pfam PF02687 FtsX-like permease family 290 366 3.7E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_2312 1ed4c2a30300871cab3e2b9f7b0e3869 475 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 14 454 1.0E-136 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Clos_2312 1ed4c2a30300871cab3e2b9f7b0e3869 475 PIRSF PIRSF005690 1 475 6.0E-161 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Clos_1702 84eb41b251a83cf9145e252d68db1c7a 146 Pfam PF12821 Threonine/Serine exporter, ThrE 6 134 1.3E-34 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE Clos_2747 fdad7c32342e5bed4f99990cda7ad766 297 SUPERFAMILY SSF103481 185 287 2.22E-15 T 11-10-2018 Clos_2747 fdad7c32342e5bed4f99990cda7ad766 297 Pfam PF00892 EamA-like transporter family 150 283 8.6E-22 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_2747 fdad7c32342e5bed4f99990cda7ad766 297 Pfam PF00892 EamA-like transporter family 8 139 9.8E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_2747 fdad7c32342e5bed4f99990cda7ad766 297 SUPERFAMILY SSF103481 41 141 1.57E-9 T 11-10-2018 Clos_0998 db1bebe6b574b011edce304dbf8e1807 308 SUPERFAMILY SSF48239 30 160 1.96E-9 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Clos_0998 db1bebe6b574b011edce304dbf8e1807 308 Gene3D G3DSA:1.50.10.20 23 130 1.6E-5 T 11-10-2018 Clos_1834 315f77c1c80b0a7fb4dab80f1e25cf05 397 Gene3D G3DSA:1.10.4080.10 17 278 2.1E-11 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Clos_1834 315f77c1c80b0a7fb4dab80f1e25cf05 397 Pfam PF03747 ADP-ribosylglycohydrolase 35 207 9.8E-7 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Clos_1834 315f77c1c80b0a7fb4dab80f1e25cf05 397 SUPERFAMILY SSF101478 20 216 6.67E-9 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Clos_1121 2dd18bc51a096a70944dde0c03a68c06 125 Pfam PF01022 Bacterial regulatory protein, arsR family 41 84 5.9E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1121 2dd18bc51a096a70944dde0c03a68c06 125 SUPERFAMILY SSF46785 22 108 2.87E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1121 2dd18bc51a096a70944dde0c03a68c06 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 49 5.6E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1121 2dd18bc51a096a70944dde0c03a68c06 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 5.6E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1121 2dd18bc51a096a70944dde0c03a68c06 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 81 96 5.6E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1121 2dd18bc51a096a70944dde0c03a68c06 125 Gene3D G3DSA:1.10.10.10 7 118 1.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1121 2dd18bc51a096a70944dde0c03a68c06 125 SMART SM00418 32 110 3.1E-23 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1805 fe878d4e3afd1e68765543b0abda1439 444 TIGRFAM TIGR00784 citMHS: citrate transporter 1 444 2.5E-119 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 Clos_1805 fe878d4e3afd1e68765543b0abda1439 444 Pfam PF03600 Citrate transporter 14 385 8.2E-40 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Clos_0994 7dc129205dfbe29408aa5cee20b87010 168 Gene3D G3DSA:3.10.290.10 101 167 8.1E-11 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_0994 7dc129205dfbe29408aa5cee20b87010 168 SUPERFAMILY SSF55174 114 165 4.12E-6 T 11-10-2018 Clos_0143 7ef6ae2428c0f8270f9a872108c040c4 526 PRINTS PR00113 Alkaline phosphatase signature 163 183 8.0E-19 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Clos_0143 7ef6ae2428c0f8270f9a872108c040c4 526 PRINTS PR00113 Alkaline phosphatase signature 56 76 8.0E-19 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Clos_0143 7ef6ae2428c0f8270f9a872108c040c4 526 PRINTS PR00113 Alkaline phosphatase signature 281 310 8.0E-19 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Clos_0143 7ef6ae2428c0f8270f9a872108c040c4 526 PRINTS PR00113 Alkaline phosphatase signature 112 127 8.0E-19 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Clos_0143 7ef6ae2428c0f8270f9a872108c040c4 526 SUPERFAMILY SSF53649 40 524 1.6E-103 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Clos_0143 7ef6ae2428c0f8270f9a872108c040c4 526 Pfam PF00245 Alkaline phosphatase 57 524 1.4E-64 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Clos_0143 7ef6ae2428c0f8270f9a872108c040c4 526 SMART SM00098 57 526 5.3E-31 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Clos_0626 e5b4a6a83e507d39723918b233a3cd70 458 Pfam PF00171 Aldehyde dehydrogenase family 15 430 1.4E-81 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Clos_0626 e5b4a6a83e507d39723918b233a3cd70 458 SUPERFAMILY SSF53720 14 448 2.88E-111 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Clos_0626 e5b4a6a83e507d39723918b233a3cd70 458 Gene3D G3DSA:3.40.309.10 213 410 3.9E-164 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Clos_0626 e5b4a6a83e507d39723918b233a3cd70 458 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 209 216 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Clos_0626 e5b4a6a83e507d39723918b233a3cd70 458 Gene3D G3DSA:3.40.605.10 16 430 3.9E-164 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Clos_0626 e5b4a6a83e507d39723918b233a3cd70 458 PIRSF PIRSF036492 2 458 4.1E-176 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 Clos_0626 e5b4a6a83e507d39723918b233a3cd70 458 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 237 248 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Clos_0283 2d416c30956837ba5cfdffc027685aa1 87 Pfam PF01541 GIY-YIG catalytic domain 1 73 5.3E-18 T 11-10-2018 IPR000305 GIY-YIG endonuclease Clos_0283 2d416c30956837ba5cfdffc027685aa1 87 SUPERFAMILY SSF82771 2 72 2.09E-15 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Clos_0283 2d416c30956837ba5cfdffc027685aa1 87 Gene3D G3DSA:3.40.1440.10 1 87 6.9E-32 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Clos_1400 db89221c648a7982563e8a996a1d154a 197 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 182 3.6E-52 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Clos_1400 db89221c648a7982563e8a996a1d154a 197 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 191 20.525 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Clos_1400 db89221c648a7982563e8a996a1d154a 197 SMART SM01207 9 183 5.5E-80 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Clos_1400 db89221c648a7982563e8a996a1d154a 197 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 191 2.7E-52 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Clos_1696 194426454bbdc54d27bb5bc41d9cb3b3 121 SUPERFAMILY SSF51703 18 116 2.04E-16 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Clos_1696 194426454bbdc54d27bb5bc41d9cb3b3 121 Pfam PF16552 D-ornithine 4,5-aminomutase alpha-subunit 2 116 1.4E-57 T 11-10-2018 IPR015130 D-Lysine 5,6-aminomutase alpha subunit Clos_1696 194426454bbdc54d27bb5bc41d9cb3b3 121 Gene3D G3DSA:1.10.8.1000 45 121 6.6E-36 T 11-10-2018 Clos_0441 ec0487c8a4717140e82fda9d0524b248 130 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 24 94 2.2E-19 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Clos_0441 ec0487c8a4717140e82fda9d0524b248 130 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 22 98 1.1E-10 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Clos_0053 6fde27a4b4395e0ce675b3f5731a5f1b 103 Pfam PF02583 Metal-sensitive transcriptional repressor 22 100 2.1E-27 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Clos_0053 6fde27a4b4395e0ce675b3f5731a5f1b 103 Gene3D G3DSA:1.20.58.1000 4 103 4.5E-30 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Clos_1768 5bfb6c3023597e52c44713c51f1e1619 82 Pfam PF14209 Domain of unknown function (DUF4321) 32 79 3.6E-12 T 11-10-2018 IPR025470 Protein of unknown function DUF4321 Clos_1546 3e9f011bdb02e0b6c9d98706d5eb57a7 397 Gene3D G3DSA:3.40.640.10 64 286 2.1E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1546 3e9f011bdb02e0b6c9d98706d5eb57a7 397 Gene3D G3DSA:3.90.1150.10 27 391 2.1E-141 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_1546 3e9f011bdb02e0b6c9d98706d5eb57a7 397 SUPERFAMILY SSF53383 4 396 4.03E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1546 3e9f011bdb02e0b6c9d98706d5eb57a7 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 2.1E-15 T 11-10-2018 Clos_1546 3e9f011bdb02e0b6c9d98706d5eb57a7 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 2.1E-15 T 11-10-2018 Clos_1546 3e9f011bdb02e0b6c9d98706d5eb57a7 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 230 254 2.1E-15 T 11-10-2018 Clos_1546 3e9f011bdb02e0b6c9d98706d5eb57a7 397 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 2.1E-15 T 11-10-2018 Clos_1546 3e9f011bdb02e0b6c9d98706d5eb57a7 397 Pfam PF00155 Aminotransferase class I and II 33 391 2.5E-82 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_1546 3e9f011bdb02e0b6c9d98706d5eb57a7 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Clos_1557 5dd2733bb76557c0fef4b5c1b06589b3 331 PIRSF PIRSF001123 2 330 1.2E-103 T 11-10-2018 IPR008007 Peptidase M42 Clos_1557 5dd2733bb76557c0fef4b5c1b06589b3 331 Pfam PF05343 M42 glutamyl aminopeptidase 46 322 1.9E-92 T 11-10-2018 IPR008007 Peptidase M42 Clos_1557 5dd2733bb76557c0fef4b5c1b06589b3 331 SUPERFAMILY SSF53187 6 328 2.04E-65 T 11-10-2018 Clos_1557 5dd2733bb76557c0fef4b5c1b06589b3 331 Gene3D G3DSA:2.40.30.40 69 151 1.1E-117 T 11-10-2018 IPR023367 Peptidase M42, domain 2 Clos_1557 5dd2733bb76557c0fef4b5c1b06589b3 331 SUPERFAMILY SSF101821 70 147 1.14E-17 T 11-10-2018 Clos_1557 5dd2733bb76557c0fef4b5c1b06589b3 331 Gene3D G3DSA:3.40.630.10 8 322 1.1E-117 T 11-10-2018 Clos_0012 c5556539edc8fd2f53cd7c58d356ca4a 348 Pfam PF13303 Phosphotransferase system, EIIC 16 347 5.5E-116 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 Clos_0360 679b98c0c1f7020c6afa4b170c35da87 230 SUPERFAMILY SSF102198 2 228 1.44E-56 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_0360 679b98c0c1f7020c6afa4b170c35da87 230 Pfam PF04199 Putative cyclase 6 171 1.9E-33 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_0360 679b98c0c1f7020c6afa4b170c35da87 230 Gene3D G3DSA:3.50.30.50 1 229 1.1E-56 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_0629 229debac0194c59835b51ca00005eaad 533 SUPERFAMILY SSF52540 280 513 3.95E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0629 229debac0194c59835b51ca00005eaad 533 SMART SM00382 31 236 2.1E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0629 229debac0194c59835b51ca00005eaad 533 Gene3D G3DSA:3.40.50.300 2 255 6.5E-49 T 11-10-2018 Clos_0629 229debac0194c59835b51ca00005eaad 533 Pfam PF00005 ABC transporter 22 188 1.2E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0629 229debac0194c59835b51ca00005eaad 533 SUPERFAMILY SSF52540 5 244 4.82E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0629 229debac0194c59835b51ca00005eaad 533 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0629 229debac0194c59835b51ca00005eaad 533 Pfam PF00005 ABC transporter 295 454 1.4E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0629 229debac0194c59835b51ca00005eaad 533 Gene3D G3DSA:3.40.50.300 275 521 3.0E-38 T 11-10-2018 Clos_0905 ad61cb7ad07dd6f06284b1df6b5e3c1b 135 Gene3D G3DSA:3.30.1330.70 2 124 2.3E-10 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Clos_0905 ad61cb7ad07dd6f06284b1df6b5e3c1b 135 SUPERFAMILY SSF103084 1 121 1.02E-20 T 11-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Clos_0905 ad61cb7ad07dd6f06284b1df6b5e3c1b 135 Pfam PF05866 Endodeoxyribonuclease RusA 7 119 1.1E-19 T 11-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 Clos_2050 06ddbb47e45610c29da20eb7f78822d3 430 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 3 426 36.208 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 Clos_2050 06ddbb47e45610c29da20eb7f78822d3 430 Pfam PF03313 Serine dehydratase alpha chain 183 422 6.9E-54 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Clos_2050 06ddbb47e45610c29da20eb7f78822d3 430 PIRSF PIRSF006054 1 428 9.1E-147 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 Clos_0382 2a4fbb3c05bd8cb2f034eeae9ee8616b 270 Pfam PF02675 S-adenosylmethionine decarboxylase 42 177 9.2E-28 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Clos_0382 2a4fbb3c05bd8cb2f034eeae9ee8616b 270 PIRSF PIRSF001356 2 270 1.7E-135 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Clos_0382 2a4fbb3c05bd8cb2f034eeae9ee8616b 270 Gene3D G3DSA:3.60.90.10 93 190 8.1E-6 T 11-10-2018 Clos_0382 2a4fbb3c05bd8cb2f034eeae9ee8616b 270 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 269 2.3E-131 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Clos_0382 2a4fbb3c05bd8cb2f034eeae9ee8616b 270 SUPERFAMILY SSF56276 47 182 5.89E-22 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Clos_0382 2a4fbb3c05bd8cb2f034eeae9ee8616b 270 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 270 151.745 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Clos_1498 18def0df2c96162ca6536737841921ed 89 PIRSF PIRSF004669 1 89 1.1E-32 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Clos_1498 18def0df2c96162ca6536737841921ed 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 6.2E-32 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Clos_1498 18def0df2c96162ca6536737841921ed 89 Pfam PF01313 Bacterial export proteins, family 3 5 77 3.3E-29 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Clos_1498 18def0df2c96162ca6536737841921ed 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.2E-23 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Clos_1498 18def0df2c96162ca6536737841921ed 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.2E-23 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Clos_1498 18def0df2c96162ca6536737841921ed 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.2E-23 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Clos_1713 0b15d12a6a118e36be0589dd79004fd1 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.6E-59 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Clos_1713 0b15d12a6a118e36be0589dd79004fd1 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.274 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Clos_1713 0b15d12a6a118e36be0589dd79004fd1 149 Gene3D G3DSA:3.50.80.10 1 148 6.1E-60 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Clos_1713 0b15d12a6a118e36be0589dd79004fd1 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 6.0E-58 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Clos_1713 0b15d12a6a118e36be0589dd79004fd1 149 SUPERFAMILY SSF69500 1 145 7.06E-58 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Clos_2354 6d47fed79ff359279ae6644adfe2a6a7 416 SUPERFAMILY SSF53335 222 382 5.84E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2354 6d47fed79ff359279ae6644adfe2a6a7 416 SUPERFAMILY SSF46955 1 117 5.86E-16 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_2354 6d47fed79ff359279ae6644adfe2a6a7 416 Pfam PF13649 Methyltransferase domain 241 326 8.2E-7 T 11-10-2018 Clos_2354 6d47fed79ff359279ae6644adfe2a6a7 416 Gene3D G3DSA:1.10.1660.10 1 126 1.2E-17 T 11-10-2018 Clos_2354 6d47fed79ff359279ae6644adfe2a6a7 416 Pfam PF13411 MerR HTH family regulatory protein 1 65 1.5E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2354 6d47fed79ff359279ae6644adfe2a6a7 416 Gene3D G3DSA:3.40.50.150 211 406 7.2E-13 T 11-10-2018 Clos_2354 6d47fed79ff359279ae6644adfe2a6a7 416 SMART SM00422 1 68 2.6E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_0375 3fc62592c69a729ec93a9c9de535b04a 295 SUPERFAMILY SSF56176 5 169 3.78E-48 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Clos_0375 3fc62592c69a729ec93a9c9de535b04a 295 Gene3D G3DSA:3.30.390.50 176 291 6.0E-29 T 11-10-2018 Clos_0375 3fc62592c69a729ec93a9c9de535b04a 295 SMART SM01092 178 281 0.0026 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Clos_0375 3fc62592c69a729ec93a9c9de535b04a 295 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 179 280 3.7E-9 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Clos_0375 3fc62592c69a729ec93a9c9de535b04a 295 Gene3D G3DSA:3.30.465.10 3 172 1.0E-55 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Clos_0375 3fc62592c69a729ec93a9c9de535b04a 295 SUPERFAMILY SSF55447 179 281 1.44E-9 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Clos_0375 3fc62592c69a729ec93a9c9de535b04a 295 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 168 1.2E-44 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Clos_1787 68d7f195d9d26972ca4fb95ce5d2c0a1 225 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 120 207 1.3E-33 T 11-10-2018 IPR014197 Sporulation protein YunB Clos_1787 68d7f195d9d26972ca4fb95ce5d2c0a1 225 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 15 211 6.1E-60 T 11-10-2018 IPR014197 Sporulation protein YunB Clos_1787 68d7f195d9d26972ca4fb95ce5d2c0a1 225 PIRSF PIRSF021383 3 223 1.7E-51 T 11-10-2018 IPR014197 Sporulation protein YunB Clos_1508 875dded98ceee0550ea2fbb9bf2d78a8 205 SUPERFAMILY SSF103039 7 203 7.32E-58 T 11-10-2018 IPR028976 CheC-like superfamily Clos_1508 875dded98ceee0550ea2fbb9bf2d78a8 205 Gene3D G3DSA:3.40.1550.10 7 204 2.0E-65 T 11-10-2018 IPR028976 CheC-like superfamily Clos_1508 875dded98ceee0550ea2fbb9bf2d78a8 205 Pfam PF13690 Chemotaxis phosphatase CheX 70 151 2.6E-10 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Clos_1508 875dded98ceee0550ea2fbb9bf2d78a8 205 Pfam PF04509 CheC-like family 11 46 2.4E-15 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 Clos_0295 05dc72e2218248abfd42c6ca2b05a6a0 551 Pfam PF13556 PucR C-terminal helix-turn-helix domain 487 545 1.8E-17 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Clos_0295 05dc72e2218248abfd42c6ca2b05a6a0 551 Pfam PF07905 Purine catabolism regulatory protein-like family 11 131 4.0E-29 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain Clos_0295 05dc72e2218248abfd42c6ca2b05a6a0 551 Gene3D G3DSA:1.10.10.2840 418 551 5.0E-18 T 11-10-2018 Clos_0121 9abed4e0408958eefa71fe589dbd349b 231 SMART SM00448 5 115 5.2E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0121 9abed4e0408958eefa71fe589dbd349b 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 2.3E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0121 9abed4e0408958eefa71fe589dbd349b 231 Gene3D G3DSA:3.40.50.2300 1 134 1.6E-35 T 11-10-2018 Clos_0121 9abed4e0408958eefa71fe589dbd349b 231 SMART SM00862 153 229 7.7E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0121 9abed4e0408958eefa71fe589dbd349b 231 SUPERFAMILY SSF52172 4 184 4.68E-39 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0121 9abed4e0408958eefa71fe589dbd349b 231 Pfam PF00072 Response regulator receiver domain 7 115 1.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0121 9abed4e0408958eefa71fe589dbd349b 231 Gene3D G3DSA:1.10.10.10 135 231 1.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0606 e08947ea38812d483b4b83bc0c6b83bf 135 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_0606 e08947ea38812d483b4b83bc0c6b83bf 135 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 1.6E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_0606 e08947ea38812d483b4b83bc0c6b83bf 135 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 4.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Clos_1769 d88160471b75cd16fa6acd7be672b8b0 173 Pfam PF07456 Heptaprenyl diphosphate synthase component I 12 158 1.1E-48 T 11-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I Clos_1769 d88160471b75cd16fa6acd7be672b8b0 173 PIRSF PIRSF027391 1 173 1.4E-48 T 11-10-2018 IPR014535 Predicted heptaprenyl diphosphate synthase, component I Clos_1769 d88160471b75cd16fa6acd7be672b8b0 173 Gene3D G3DSA:1.10.1760.20 1 167 1.8E-13 T 11-10-2018 Clos_2708 37d8c08dbe41213f703094d917dd13c6 235 Pfam PF03749 Sugar fermentation stimulation protein 12 223 2.8E-76 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein Clos_2708 37d8c08dbe41213f703094d917dd13c6 235 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 224 2.2E-55 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein Clos_2708 37d8c08dbe41213f703094d917dd13c6 235 Gene3D G3DSA:2.40.50.580 1 77 9.4E-24 T 11-10-2018 Clos_2708 37d8c08dbe41213f703094d917dd13c6 235 Gene3D G3DSA:3.40.1350.60 79 233 4.1E-44 T 11-10-2018 Clos_2708 37d8c08dbe41213f703094d917dd13c6 235 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 233 49.779 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein Clos_0011 3510dbacdb304ddc30526f60e1443283 172 SUPERFAMILY SSF46785 1 60 3.52E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0011 3510dbacdb304ddc30526f60e1443283 172 Pfam PF02829 3H domain 72 169 2.7E-32 T 11-10-2018 IPR004173 3H domain GO:0036094 Clos_0011 3510dbacdb304ddc30526f60e1443283 172 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 75 170 9.0E-23 T 11-10-2018 IPR004173 3H domain GO:0036094 Clos_0011 3510dbacdb304ddc30526f60e1443283 172 Pfam PF08279 HTH domain 6 59 2.5E-15 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Clos_0011 3510dbacdb304ddc30526f60e1443283 172 SUPERFAMILY SSF75500 67 171 5.62E-31 T 11-10-2018 IPR035922 3H domain superfamily Clos_0011 3510dbacdb304ddc30526f60e1443283 172 PIRSF PIRSF037847 1 172 1.3E-70 T 11-10-2018 IPR026043 Transcription repressor NadR Clos_0011 3510dbacdb304ddc30526f60e1443283 172 Gene3D G3DSA:1.10.10.10 1 61 1.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0011 3510dbacdb304ddc30526f60e1443283 172 Gene3D G3DSA:3.30.1340.20 65 172 4.1E-34 T 11-10-2018 IPR035922 3H domain superfamily Clos_1285 4d16e8a184bc9f4797d7ca5399f10f17 165 Pfam PF06114 IrrE N-terminal-like domain 48 116 1.5E-8 T 11-10-2018 IPR010359 IrrE N-terminal-like domain Clos_2294 a82ba52694a5f31ec4d7211686996795 400 Pfam PF00149 Calcineurin-like phosphoesterase 115 342 1.4E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Clos_2294 a82ba52694a5f31ec4d7211686996795 400 SMART SM00156 81 389 5.2E-6 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2294 a82ba52694a5f31ec4d7211686996795 400 PRINTS PR00114 Serine/threonine phosphatase family signature 113 140 2.2E-12 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2294 a82ba52694a5f31ec4d7211686996795 400 PRINTS PR00114 Serine/threonine phosphatase family signature 148 175 2.2E-12 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2294 a82ba52694a5f31ec4d7211686996795 400 PRINTS PR00114 Serine/threonine phosphatase family signature 332 352 2.2E-12 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2294 a82ba52694a5f31ec4d7211686996795 400 PRINTS PR00114 Serine/threonine phosphatase family signature 354 370 2.2E-12 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Clos_2294 a82ba52694a5f31ec4d7211686996795 400 Gene3D G3DSA:3.60.21.10 49 394 1.6E-38 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_2294 a82ba52694a5f31ec4d7211686996795 400 SUPERFAMILY SSF56300 68 382 2.06E-39 T 11-10-2018 Clos_1141 576d7d90e84b8c5ca78b0b51e74232f4 176 Gene3D G3DSA:3.40.630.30 2 172 2.0E-37 T 11-10-2018 Clos_1141 576d7d90e84b8c5ca78b0b51e74232f4 176 SUPERFAMILY SSF55729 2 152 9.02E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1141 576d7d90e84b8c5ca78b0b51e74232f4 176 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 6.1E-28 T 11-10-2018 IPR000182 GNAT domain Clos_2344 f953d56b935db738a1b1e240af5757f6 406 Pfam PF00375 Sodium:dicarboxylate symporter family 9 394 1.0E-116 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Clos_2344 f953d56b935db738a1b1e240af5757f6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 3.3E-26 T 11-10-2018 Clos_2344 f953d56b935db738a1b1e240af5757f6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 3.3E-26 T 11-10-2018 Clos_2344 f953d56b935db738a1b1e240af5757f6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 3.3E-26 T 11-10-2018 Clos_2344 f953d56b935db738a1b1e240af5757f6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 3.3E-26 T 11-10-2018 Clos_2344 f953d56b935db738a1b1e240af5757f6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 3.3E-26 T 11-10-2018 Clos_2344 f953d56b935db738a1b1e240af5757f6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 3.3E-26 T 11-10-2018 Clos_2344 f953d56b935db738a1b1e240af5757f6 406 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 3.3E-26 T 11-10-2018 Clos_2344 f953d56b935db738a1b1e240af5757f6 406 SUPERFAMILY SSF118215 9 394 2.62E-101 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Clos_2344 f953d56b935db738a1b1e240af5757f6 406 Gene3D G3DSA:1.10.3860.10 1 406 2.0E-107 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Clos_2482 cc66a4007e3c06e64e2be0d6322e69df 148 SUPERFAMILY SSF158397 30 148 8.24E-32 T 11-10-2018 IPR024042 TM1646-like domain superfamily Clos_2482 cc66a4007e3c06e64e2be0d6322e69df 148 Gene3D G3DSA:1.20.120.490 27 148 6.9E-33 T 11-10-2018 IPR024042 TM1646-like domain superfamily Clos_2482 cc66a4007e3c06e64e2be0d6322e69df 148 Pfam PF03885 Protein of unknown function (DUF327) 17 147 5.0E-38 T 11-10-2018 IPR005585 Protein of unknown function DUF327 Clos_0831 82949626d04ef89e16037c55955a8fd3 144 PIRSF PIRSF005900 1 144 4.5E-34 T 11-10-2018 IPR002177 DNA-binding protein Dps Clos_0831 82949626d04ef89e16037c55955a8fd3 144 Gene3D G3DSA:1.20.1260.10 2 144 3.0E-44 T 11-10-2018 IPR012347 Ferritin-like Clos_0831 82949626d04ef89e16037c55955a8fd3 144 Pfam PF00210 Ferritin-like domain 5 143 1.7E-18 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Clos_0831 82949626d04ef89e16037c55955a8fd3 144 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 25 41 7.4E-7 T 11-10-2018 IPR002177 DNA-binding protein Dps Clos_0831 82949626d04ef89e16037c55955a8fd3 144 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 121 139 7.4E-7 T 11-10-2018 IPR002177 DNA-binding protein Dps Clos_0831 82949626d04ef89e16037c55955a8fd3 144 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 49 65 7.4E-7 T 11-10-2018 IPR002177 DNA-binding protein Dps Clos_0831 82949626d04ef89e16037c55955a8fd3 144 SUPERFAMILY SSF47240 6 143 6.41E-42 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_1260 361f4f6e75cd5766c2f2b261a5f0b6ac 88 SUPERFAMILY SSF57802 1 34 3.4E-5 T 11-10-2018 Clos_1260 361f4f6e75cd5766c2f2b261a5f0b6ac 88 Pfam PF14206 Cysteine-rich CPCC 4 78 2.3E-35 T 11-10-2018 IPR025983 Cysteine-rich CPCC domain Clos_0557 cb073b2c2db884b16ddfa7824fc8571c 247 SUPERFAMILY SSF55666 154 241 6.54E-24 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_0557 cb073b2c2db884b16ddfa7824fc8571c 247 Hamap MF_00564 Ribonuclease PH [rph]. 12 238 44.882 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Clos_0557 cb073b2c2db884b16ddfa7824fc8571c 247 Gene3D G3DSA:3.30.230.70 10 238 9.6E-64 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_0557 cb073b2c2db884b16ddfa7824fc8571c 247 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 2.1E-23 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_0557 cb073b2c2db884b16ddfa7824fc8571c 247 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 237 5.7E-118 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Clos_0557 cb073b2c2db884b16ddfa7824fc8571c 247 SUPERFAMILY SSF54211 3 182 1.11E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Clos_0557 cb073b2c2db884b16ddfa7824fc8571c 247 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site Clos_0557 cb073b2c2db884b16ddfa7824fc8571c 247 Pfam PF03725 3' exoribonuclease family, domain 2 159 225 2.9E-12 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Clos_2715 fdddfcc682a40c2628d13a8ce2db3679 71 Gene3D G3DSA:2.30.30.90 1 71 6.3E-13 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain Clos_2715 fdddfcc682a40c2628d13a8ce2db3679 71 SMART SM00899 1 71 1.0E-8 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Clos_2715 fdddfcc682a40c2628d13a8ce2db3679 71 SUPERFAMILY SSF50037 3 70 2.99E-10 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal Clos_2715 fdddfcc682a40c2628d13a8ce2db3679 71 Pfam PF04023 FeoA domain 1 70 3.8E-11 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Clos_1489 d6cd1076ea664d942fc2667bdbc930f6 71 Pfam PF06289 Flagellar protein (FlbD) 4 62 3.8E-29 T 11-10-2018 IPR009384 Swarming motility protein SwrD-like Clos_1970 9e2891dd5dcbd08113fc93156979d716 184 SUPERFAMILY SSF102829 7 88 6.15E-16 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily Clos_1970 9e2891dd5dcbd08113fc93156979d716 184 Pfam PF05164 Cell division protein ZapA 9 91 1.8E-17 T 11-10-2018 IPR007838 Cell division protein ZapA-like Clos_1076 bf7b85bad61cf1dc885e92492f0f9d29 216 Hamap MF_02100 Uncharacterized methyltransferase . 1 214 41.64 T 11-10-2018 IPR023553 Uncharacterised methyltransferase, YrrT GO:0008168 Clos_1076 bf7b85bad61cf1dc885e92492f0f9d29 216 SUPERFAMILY SSF53335 6 212 2.19E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1076 bf7b85bad61cf1dc885e92492f0f9d29 216 Gene3D G3DSA:3.40.50.150 22 214 9.9E-39 T 11-10-2018 Clos_1076 bf7b85bad61cf1dc885e92492f0f9d29 216 Pfam PF13649 Methyltransferase domain 53 141 1.8E-13 T 11-10-2018 Clos_0393 c7f43f6dfdee88b817795b062396e679 171 Pfam PF17099 Tryptophan transporter TrpP 2 164 1.2E-47 T 11-10-2018 IPR031360 Tryptophan transporter TrpP Clos_0393 c7f43f6dfdee88b817795b062396e679 171 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 163 3.0E-40 T 11-10-2018 Clos_0980 0659c2d83a83a7d1b75069d2e6922ba6 260 SMART SM00382 36 239 2.1E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0980 0659c2d83a83a7d1b75069d2e6922ba6 260 Gene3D G3DSA:3.40.50.300 4 250 6.4E-64 T 11-10-2018 Clos_0980 0659c2d83a83a7d1b75069d2e6922ba6 260 SUPERFAMILY SSF52540 7 229 4.28E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0980 0659c2d83a83a7d1b75069d2e6922ba6 260 Pfam PF00005 ABC transporter 27 175 1.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0232 e675906a67859ae2044fc0f07101cc95 337 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 13 333 51.081 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Clos_0232 e675906a67859ae2044fc0f07101cc95 337 Pfam PF03590 Aspartate-ammonia ligase 22 247 2.4E-110 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Clos_0232 e675906a67859ae2044fc0f07101cc95 337 PIRSF PIRSF001555 9 337 3.5E-162 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Clos_0232 e675906a67859ae2044fc0f07101cc95 337 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 24 327 1.5E-112 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 Clos_0232 e675906a67859ae2044fc0f07101cc95 337 SUPERFAMILY SSF55681 17 331 1.49E-99 T 11-10-2018 Clos_0232 e675906a67859ae2044fc0f07101cc95 337 Gene3D G3DSA:3.30.930.10 14 332 2.6E-147 T 11-10-2018 Clos_2303 ab0987b932ec3ef11a2b0f42c4d98de3 349 Pfam PF03601 Conserved hypothetical protein 698 10 326 1.9E-76 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Clos_2062 c0fdea840adbb4de498683c7d33155bc 59 Gene3D G3DSA:1.10.8.910 4 59 3.8E-13 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily Clos_2062 c0fdea840adbb4de498683c7d33155bc 59 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 4 54 1.2E-10 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Clos_2091 47971a2fcf4396b03c4f77058297cdc6 399 Gene3D G3DSA:1.20.1530.20 1 387 4.4E-42 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Clos_2091 47971a2fcf4396b03c4f77058297cdc6 399 Pfam PF00999 Sodium/hydrogen exchanger family 10 368 8.8E-34 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Clos_1675 126bac8ba694d1bbbc6dde460fd7bc90 95 Pfam PF11823 Protein of unknown function (DUF3343) 10 79 8.3E-14 T 11-10-2018 IPR021778 Domain of unknown function DUF3343 Clos_2196 77565f5998345b0f07327bc321979b36 232 Pfam PF04239 Protein of unknown function (DUF421) 88 204 3.1E-26 T 11-10-2018 IPR007353 Protein of unknown function DUF421 Clos_2196 77565f5998345b0f07327bc321979b36 232 Pfam PF04239 Protein of unknown function (DUF421) 172 225 1.7E-6 T 11-10-2018 IPR007353 Protein of unknown function DUF421 Clos_2196 77565f5998345b0f07327bc321979b36 232 Gene3D G3DSA:3.30.240.20 81 153 8.5E-22 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Clos_2196 77565f5998345b0f07327bc321979b36 232 Gene3D G3DSA:3.30.240.20 171 230 1.3E-16 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Clos_2490 c51817a08ed1b59b9fca7f00d7cbfb00 662 Pfam PF07196 Flagellin hook IN motif 237 302 1.6E-6 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Clos_2490 c51817a08ed1b59b9fca7f00d7cbfb00 662 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 8 117 2.0E-23 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Clos_2490 c51817a08ed1b59b9fca7f00d7cbfb00 662 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 335 651 1.1E-40 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Clos_2789 e5f16bd39d005344391eb6d15a8e208d 633 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 418 576 1.5E-33 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2789 e5f16bd39d005344391eb6d15a8e208d 633 SMART SM00283 349 624 1.0E-52 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2789 e5f16bd39d005344391eb6d15a8e208d 633 SUPERFAMILY SSF58104 295 623 7.72E-56 T 11-10-2018 Clos_2789 e5f16bd39d005344391eb6d15a8e208d 633 Gene3D G3DSA:1.10.287.950 334 624 5.8E-54 T 11-10-2018 Clos_2799 a8c6bb151b5aa75d9d1d80b1626b47d1 670 Gene3D G3DSA:3.90.1640.10 337 551 9.0E-55 T 11-10-2018 Clos_2799 a8c6bb151b5aa75d9d1d80b1626b47d1 670 Pfam PF02272 DHHA1 domain 535 660 4.4E-13 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Clos_2799 a8c6bb151b5aa75d9d1d80b1626b47d1 670 Pfam PF01368 DHH family 354 509 3.0E-19 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Clos_2799 a8c6bb151b5aa75d9d1d80b1626b47d1 670 Gene3D G3DSA:3.10.310.30 552 667 5.4E-11 T 11-10-2018 Clos_2799 a8c6bb151b5aa75d9d1d80b1626b47d1 670 PIRSF PIRSF026583 1 670 6.3E-215 T 11-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA Clos_2799 a8c6bb151b5aa75d9d1d80b1626b47d1 670 Gene3D G3DSA:3.30.450.20 55 160 7.8E-13 T 11-10-2018 Clos_2799 a8c6bb151b5aa75d9d1d80b1626b47d1 670 SUPERFAMILY SSF64182 354 652 5.1E-61 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily Clos_2799 a8c6bb151b5aa75d9d1d80b1626b47d1 670 SUPERFAMILY SSF55073 187 314 7.06E-5 T 11-10-2018 IPR029787 Nucleotide cyclase Clos_2427 a5cb4648e7345b9a0c3ba7d2787b38bb 254 Pfam PF01471 Putative peptidoglycan binding domain 192 235 5.5E-10 T 11-10-2018 IPR002477 Peptidoglycan binding-like Clos_2427 a5cb4648e7345b9a0c3ba7d2787b38bb 254 Pfam PF03734 L,D-transpeptidase catalytic domain 65 171 4.8E-21 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Clos_2427 a5cb4648e7345b9a0c3ba7d2787b38bb 254 SUPERFAMILY SSF47090 181 250 1.81E-13 T 11-10-2018 IPR036365 PGBD-like superfamily Clos_2427 a5cb4648e7345b9a0c3ba7d2787b38bb 254 Gene3D G3DSA:2.40.440.10 57 172 5.3E-38 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Clos_2427 a5cb4648e7345b9a0c3ba7d2787b38bb 254 SUPERFAMILY SSF141523 60 173 1.83E-34 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Clos_2427 a5cb4648e7345b9a0c3ba7d2787b38bb 254 Gene3D G3DSA:1.10.101.10 182 252 1.7E-11 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Clos_2660 e109c10d82c6c1f3b6c1dcceb6554d5c 367 Gene3D G3DSA:1.10.3210.10 8 310 5.6E-66 T 11-10-2018 Clos_2660 e109c10d82c6c1f3b6c1dcceb6554d5c 367 SMART SM00471 144 280 0.0047 T 11-10-2018 IPR003607 HD/PDEase domain Clos_2660 e109c10d82c6c1f3b6c1dcceb6554d5c 367 Pfam PF13487 HD domain 200 261 5.7E-15 T 11-10-2018 Clos_2660 e109c10d82c6c1f3b6c1dcceb6554d5c 367 SUPERFAMILY SSF109604 144 309 1.8E-27 T 11-10-2018 Clos_2262 4f6a3ed9a81b15ec199c6daec4550b99 241 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2262 4f6a3ed9a81b15ec199c6daec4550b99 241 SUPERFAMILY SSF52540 14 233 1.77E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2262 4f6a3ed9a81b15ec199c6daec4550b99 241 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 14 227 7.0E-90 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Clos_2262 4f6a3ed9a81b15ec199c6daec4550b99 241 Gene3D G3DSA:3.40.50.300 12 238 3.7E-71 T 11-10-2018 Clos_2262 4f6a3ed9a81b15ec199c6daec4550b99 241 SMART SM00382 40 227 4.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2262 4f6a3ed9a81b15ec199c6daec4550b99 241 Pfam PF00005 ABC transporter 31 178 4.9E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1074 69070b946890307e4c7851ad41931ff2 374 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 371 9.5E-154 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Clos_1074 69070b946890307e4c7851ad41931ff2 374 PIRSF PIRSF001434 1 372 1.1E-140 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Clos_1074 69070b946890307e4c7851ad41931ff2 374 Gene3D G3DSA:3.40.640.10 1 245 1.1E-93 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_1074 69070b946890307e4c7851ad41931ff2 374 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Clos_1074 69070b946890307e4c7851ad41931ff2 374 SUPERFAMILY SSF53383 3 370 6.45E-109 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_1074 69070b946890307e4c7851ad41931ff2 374 Gene3D G3DSA:3.90.1150.10 246 372 6.0E-47 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_1128 8d08b30274eff39acab52d5adc121017 85 Pfam PF07872 Protein of unknown function (DUF1659) 27 63 4.8E-9 T 11-10-2018 IPR012454 Protein of unknown function DUF1659 Clos_2210 7b699301e73810227360c540b8e1dfab 186 PIRSF PIRSF006135 3 186 6.9E-58 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Clos_2210 7b699301e73810227360c540b8e1dfab 186 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 185 5.6E-60 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Clos_2210 7b699301e73810227360c540b8e1dfab 186 SUPERFAMILY SSF52540 5 186 1.82E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2210 7b699301e73810227360c540b8e1dfab 186 Gene3D G3DSA:3.40.50.300 4 186 1.8E-60 T 11-10-2018 Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 Gene3D G3DSA:1.10.101.10 64 142 3.4E-25 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 Gene3D G3DSA:3.10.350.10 12 59 8.9E-22 T 11-10-2018 IPR036779 LysM domain superfamily Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 Gene3D G3DSA:3.10.350.10 151 198 3.5E-20 T 11-10-2018 IPR036779 LysM domain superfamily Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 SUPERFAMILY SSF54106 13 58 4.71E-12 T 11-10-2018 Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 SUPERFAMILY SSF47090 63 134 1.57E-22 T 11-10-2018 IPR036365 PGBD-like superfamily Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 Pfam PF01476 LysM domain 15 58 4.3E-14 T 11-10-2018 IPR018392 LysM domain Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 Pfam PF01476 LysM domain 154 197 1.5E-12 T 11-10-2018 IPR018392 LysM domain Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 Pfam PF01471 Putative peptidoglycan binding domain 76 132 1.2E-17 T 11-10-2018 IPR002477 Peptidoglycan binding-like Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 SMART SM00257 153 197 2.2E-14 T 11-10-2018 IPR018392 LysM domain Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 SMART SM00257 14 58 2.2E-16 T 11-10-2018 IPR018392 LysM domain Clos_2547 f54a905dfda0d799b14f19d94887e3b8 198 SUPERFAMILY SSF54106 153 197 1.83E-10 T 11-10-2018 Clos_0198 0afb9e872c94cedd48cd8a8166a6fdee 249 Gene3D G3DSA:3.30.70.2200 2 159 1.8E-16 T 11-10-2018 Clos_1755 ebcf6352621a67a483f614a856c99037 249 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 4 203 1.0E-59 T 11-10-2018 IPR018768 Domain of unknown function DUF2344 Clos_1755 ebcf6352621a67a483f614a856c99037 249 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 4 230 5.8E-60 T 11-10-2018 IPR018768 Domain of unknown function DUF2344 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 Pfam PF13180 PDZ domain 354 433 4.6E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 SUPERFAMILY SSF50494 132 338 6.08E-58 T 11-10-2018 IPR009003 Peptidase S1, PA clan Clos_2777 718518f205dc72ec970b6ea779f33be2 441 SUPERFAMILY SSF50156 324 433 1.21E-21 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 Pfam PF13365 Trypsin-like peptidase domain 166 307 3.2E-33 T 11-10-2018 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 Gene3D G3DSA:2.30.42.10 341 439 3.5E-20 T 11-10-2018 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 Gene3D G3DSA:2.40.10.120 122 338 2.3E-69 T 11-10-2018 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 PRINTS PR00834 HtrA/DegQ protease family signature 198 218 8.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 PRINTS PR00834 HtrA/DegQ protease family signature 300 317 8.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 PRINTS PR00834 HtrA/DegQ protease family signature 278 295 8.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 PRINTS PR00834 HtrA/DegQ protease family signature 175 187 8.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 PRINTS PR00834 HtrA/DegQ protease family signature 238 262 8.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 PRINTS PR00834 HtrA/DegQ protease family signature 384 396 8.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Clos_2777 718518f205dc72ec970b6ea779f33be2 441 SMART SM00228 346 426 1.4E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Clos_0806 3e493f70698444ddc87b1bdf984d75b9 90 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 4.4E-29 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Clos_0806 3e493f70698444ddc87b1bdf984d75b9 90 Gene3D G3DSA:2.40.50.220 1 90 5.6E-31 T 11-10-2018 IPR036677 EutN/Ccml superfamily Clos_0806 3e493f70698444ddc87b1bdf984d75b9 90 SUPERFAMILY SSF159133 1 88 1.83E-29 T 11-10-2018 IPR036677 EutN/Ccml superfamily Clos_0806 3e493f70698444ddc87b1bdf984d75b9 90 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 86 5.0E-12 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Clos_2592 2500cd981899674670c94624cf3e111f 249 SUPERFAMILY SSF52540 3 240 3.55E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2592 2500cd981899674670c94624cf3e111f 249 SMART SM00382 27 223 4.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2592 2500cd981899674670c94624cf3e111f 249 PIRSF PIRSF039085 1 248 2.9E-90 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Clos_2592 2500cd981899674670c94624cf3e111f 249 Gene3D G3DSA:3.40.50.300 1 247 5.8E-71 T 11-10-2018 Clos_2592 2500cd981899674670c94624cf3e111f 249 Pfam PF00005 ABC transporter 18 175 5.7E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0678 93bdcc8a1e2365ce915ac3895b9c74bd 667 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 574 1.8E-100 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Clos_0678 93bdcc8a1e2365ce915ac3895b9c74bd 667 Pfam PF11874 Domain of unknown function (DUF3394) 590 639 2.9E-8 T 11-10-2018 IPR021814 Protein of unknown function DUF3394 Clos_0678 93bdcc8a1e2365ce915ac3895b9c74bd 667 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 39 655 3.8E-224 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 Pfam PF12848 ABC transporter 230 315 1.6E-22 T 11-10-2018 IPR032781 ABC-transporter extension domain Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 SUPERFAMILY SSF52540 4 245 5.68E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 SUPERFAMILY SSF52540 308 511 9.31E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 Gene3D G3DSA:3.40.50.300 3 285 2.9E-65 T 11-10-2018 Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 Pfam PF00005 ABC transporter 341 469 2.6E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 SMART SM00382 28 236 1.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 SMART SM00382 349 512 4.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 Gene3D G3DSA:3.40.50.300 289 516 4.2E-42 T 11-10-2018 Clos_0101 1a88acdff0efd7fec4dcc50fa4b478bb 518 Pfam PF00005 ABC transporter 20 191 4.1E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 7.1E-5 T 11-10-2018 Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 SUPERFAMILY SSF51735 5 246 1.2E-94 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 1.2E-106 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 245 4.5E-71 T 11-10-2018 Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.1E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.1E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.1E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 Gene3D G3DSA:3.40.50.720 1 247 5.9E-92 T 11-10-2018 Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.6E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.6E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.6E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.6E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.6E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_1455 c5b158273d50f9b8f9be0acd26a95314 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.6E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Clos_1352 817a1bbcc1a6ad1c1506ce3fc1c4cc39 176 SUPERFAMILY SSF89028 1 167 1.04E-57 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_1352 817a1bbcc1a6ad1c1506ce3fc1c4cc39 176 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 144 2.0E-49 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_1352 817a1bbcc1a6ad1c1506ce3fc1c4cc39 176 Pfam PF01923 Cobalamin adenosyltransferase 3 164 4.2E-59 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_1352 817a1bbcc1a6ad1c1506ce3fc1c4cc39 176 Gene3D G3DSA:1.20.1200.10 13 176 3.1E-57 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_1352 817a1bbcc1a6ad1c1506ce3fc1c4cc39 176 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 167 3.9E-58 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Clos_1288 8e1ac1aba98a6f65c1b5ca906e708e11 71 Pfam PF12728 Helix-turn-helix domain 7 55 2.4E-13 T 11-10-2018 Clos_1288 8e1ac1aba98a6f65c1b5ca906e708e11 71 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 52 8.0E-9 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Clos_2285 f90a558aa65733774d70b9d41e7ad60a 346 Pfam PF07833 Copper amine oxidase N-terminal domain 250 328 1.2E-16 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Clos_2285 f90a558aa65733774d70b9d41e7ad60a 346 Gene3D G3DSA:3.30.457.10 254 328 9.9E-13 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_2285 f90a558aa65733774d70b9d41e7ad60a 346 SUPERFAMILY SSF55383 254 328 1.37E-13 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_2519 98063d8437d3aa74ce87f37e4500daf4 667 Gene3D G3DSA:1.10.287.950 333 665 1.5E-61 T 11-10-2018 Clos_2519 98063d8437d3aa74ce87f37e4500daf4 667 SMART SM00283 390 665 1.6E-69 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2519 98063d8437d3aa74ce87f37e4500daf4 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 450 616 5.8E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_2519 98063d8437d3aa74ce87f37e4500daf4 667 Pfam PF02743 Cache domain 41 268 8.5E-29 T 11-10-2018 IPR033479 Double Cache domain 1 Clos_2519 98063d8437d3aa74ce87f37e4500daf4 667 SUPERFAMILY SSF58104 336 665 1.07E-67 T 11-10-2018 Clos_2519 98063d8437d3aa74ce87f37e4500daf4 667 SUPERFAMILY SSF103190 80 176 1.88E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Clos_2519 98063d8437d3aa74ce87f37e4500daf4 667 Gene3D G3DSA:3.30.450.20 143 288 6.6E-26 T 11-10-2018 Clos_2404 313bbfee67d13c39e8b9756ccc3a951c 304 SUPERFAMILY SSF56112 21 288 2.68E-45 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Clos_2404 313bbfee67d13c39e8b9756ccc3a951c 304 Gene3D G3DSA:3.30.200.20 1 95 1.6E-28 T 11-10-2018 Clos_2404 313bbfee67d13c39e8b9756ccc3a951c 304 Pfam PF01633 Choline/ethanolamine kinase 43 240 3.0E-23 T 11-10-2018 Clos_2404 313bbfee67d13c39e8b9756ccc3a951c 304 Gene3D G3DSA:3.90.1200.10 103 295 7.0E-54 T 11-10-2018 Clos_2522 6be5f6b151cd8266df272e02ffa80a00 164 Pfam PF05130 FlgN protein 1 150 5.5E-28 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Clos_2522 6be5f6b151cd8266df272e02ffa80a00 164 Gene3D G3DSA:1.20.58.300 2 135 1.5E-8 T 11-10-2018 Clos_2522 6be5f6b151cd8266df272e02ffa80a00 164 SUPERFAMILY SSF140566 2 134 5.62E-20 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Clos_1747 641de7227df96b13a2b0fe3061ef4d1c 203 Gene3D G3DSA:1.10.3210.10 7 193 2.2E-58 T 11-10-2018 Clos_1747 641de7227df96b13a2b0fe3061ef4d1c 203 SUPERFAMILY SSF109604 4 192 1.37E-36 T 11-10-2018 Clos_1747 641de7227df96b13a2b0fe3061ef4d1c 203 Pfam PF01966 HD domain 24 134 4.1E-13 T 11-10-2018 IPR006674 HD domain Clos_1747 641de7227df96b13a2b0fe3061ef4d1c 203 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 16 187 9.2E-44 T 11-10-2018 IPR005249 Conserved hypothetical protein CHP00488 Clos_1747 641de7227df96b13a2b0fe3061ef4d1c 203 SMART SM00471 20 148 2.3E-4 T 11-10-2018 IPR003607 HD/PDEase domain Clos_0983 308b0ab415eb9f4da65a0b60e3def8d6 340 SMART SM00387 227 340 6.4E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0983 308b0ab415eb9f4da65a0b60e3def8d6 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 228 338 1.9E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Clos_0983 308b0ab415eb9f4da65a0b60e3def8d6 340 SUPERFAMILY SSF55874 172 339 9.04E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0983 308b0ab415eb9f4da65a0b60e3def8d6 340 Gene3D G3DSA:3.30.565.10 159 335 2.1E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_1804 c6f042bbee838bdd7582f3c263dc8bad 447 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 7 362 2.8E-130 T 11-10-2018 IPR010839 Acyclic terpene utilisation Clos_0504 4540c01c473f8dc1341339aec1374b03 179 Pfam PF00281 Ribosomal protein L5 24 80 8.9E-28 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0504 4540c01c473f8dc1341339aec1374b03 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.7E-42 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0504 4540c01c473f8dc1341339aec1374b03 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0504 4540c01c473f8dc1341339aec1374b03 179 Gene3D G3DSA:3.30.1440.10 1 179 4.6E-83 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0504 4540c01c473f8dc1341339aec1374b03 179 SUPERFAMILY SSF55282 3 178 5.18E-79 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0504 4540c01c473f8dc1341339aec1374b03 179 PIRSF PIRSF002161 1 179 5.8E-67 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0504 4540c01c473f8dc1341339aec1374b03 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.154 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0525 b3f25dc0d3e13817719b3d54c7b957cc 266 Pfam PF02361 Cobalt transport protein 15 235 9.7E-52 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Clos_0525 b3f25dc0d3e13817719b3d54c7b957cc 266 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 264 34.887 T 11-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 SUPERFAMILY SSF51905 35 392 4.79E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 Gene3D G3DSA:2.102.10.10 427 514 4.8E-25 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 Pfam PF00355 Rieske [2Fe-2S] domain 434 510 5.9E-14 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 Gene3D G3DSA:3.50.50.60 38 386 3.6E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 SUPERFAMILY SSF50022 392 513 2.88E-24 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 Gene3D G3DSA:3.30.9.10 131 344 3.6E-46 T 11-10-2018 Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 Pfam PF01266 FAD dependent oxidoreductase 38 384 3.0E-44 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 PRINTS PR00162 Rieske 2Fe-2S subunit signature 463 474 3.3E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 PRINTS PR00162 Rieske 2Fe-2S subunit signature 484 496 3.3E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Clos_0173 568e94c6f51ed9db7c72f7d29fdd0584 514 PRINTS PR00162 Rieske 2Fe-2S subunit signature 496 508 3.3E-6 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Clos_1948 b3f69f0d16bed04d219e67aadf9761e2 189 SUPERFAMILY SSF144091 8 182 6.02E-23 T 11-10-2018 Clos_1948 b3f69f0d16bed04d219e67aadf9761e2 189 Gene3D G3DSA:1.20.1540.10 3 188 1.5E-21 T 11-10-2018 IPR035952 Rhomboid-like superfamily Clos_1948 b3f69f0d16bed04d219e67aadf9761e2 189 Pfam PF01694 Rhomboid family 51 180 6.2E-15 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Clos_0505 e717167fc61cdcfe875616dd2de4fc0c 61 Gene3D G3DSA:4.10.830.10 1 61 3.2E-29 T 11-10-2018 Clos_0505 e717167fc61cdcfe875616dd2de4fc0c 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Clos_0505 e717167fc61cdcfe875616dd2de4fc0c 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.956 T 11-10-2018 IPR023053 Ribosomal protein S14, type Z Clos_0505 e717167fc61cdcfe875616dd2de4fc0c 61 SUPERFAMILY SSF57716 3 61 1.07E-22 T 11-10-2018 Clos_0505 e717167fc61cdcfe875616dd2de4fc0c 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 9.6E-26 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_2287 370eac98e96bab97fea72d67ca21e757 450 Gene3D G3DSA:1.20.1740.10 20 450 6.5E-95 T 11-10-2018 Clos_2287 370eac98e96bab97fea72d67ca21e757 450 PIRSF PIRSF006060 7 450 4.4E-86 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Clos_2287 370eac98e96bab97fea72d67ca21e757 450 Pfam PF13520 Amino acid permease 26 420 1.4E-59 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Clos_2802 7b58656f1aa6247e24a0253b27034531 88 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 13 86 1.1E-19 T 11-10-2018 IPR010001 SigmaK-factor processing regulatory BofA Clos_2802 7b58656f1aa6247e24a0253b27034531 88 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 8 87 2.6E-15 T 11-10-2018 IPR010001 SigmaK-factor processing regulatory BofA Clos_0094 7e94c53aaf63ef989b35f77d21dd473a 253 Gene3D G3DSA:3.30.565.40 43 161 3.3E-29 T 11-10-2018 Clos_0094 7e94c53aaf63ef989b35f77d21dd473a 253 Gene3D G3DSA:3.90.640.20 163 253 2.4E-26 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily Clos_0094 7e94c53aaf63ef989b35f77d21dd473a 253 Pfam PF11738 Protein of unknown function (DUF3298) 165 240 5.2E-20 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 Clos_0094 7e94c53aaf63ef989b35f77d21dd473a 253 Pfam PF13739 Domain of unknown function (DUF4163) 51 147 5.3E-25 T 11-10-2018 IPR025303 Deacetylase PdaC Clos_0662 39d5aac1346229f878472925e63e25a2 238 Gene3D G3DSA:3.40.50.1000 1 216 9.4E-28 T 11-10-2018 IPR023214 HAD superfamily Clos_0662 39d5aac1346229f878472925e63e25a2 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 164 1.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Clos_0662 39d5aac1346229f878472925e63e25a2 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 193 206 1.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Clos_0662 39d5aac1346229f878472925e63e25a2 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 1.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Clos_0662 39d5aac1346229f878472925e63e25a2 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 166 186 1.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Clos_0662 39d5aac1346229f878472925e63e25a2 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.3E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Clos_0662 39d5aac1346229f878472925e63e25a2 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 202 2.1E-19 T 11-10-2018 Clos_0662 39d5aac1346229f878472925e63e25a2 238 SUPERFAMILY SSF56784 1 214 2.17E-29 T 11-10-2018 IPR036412 HAD-like superfamily Clos_2309 a3d57165f76277e4107c101b1bf9f73a 214 Pfam PF02163 Peptidase family M50 123 161 1.6E-8 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Clos_1144 07e970cc9c6e341cd8faf05be8cd0976 773 Gene3D G3DSA:3.20.70.20 134 290 8.0E-34 T 11-10-2018 Clos_1144 07e970cc9c6e341cd8faf05be8cd0976 773 Gene3D G3DSA:3.20.70.20 291 751 1.5E-169 T 11-10-2018 Clos_1144 07e970cc9c6e341cd8faf05be8cd0976 773 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 121 769 1.4E-223 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Clos_1144 07e970cc9c6e341cd8faf05be8cd0976 773 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 300 769 2.0E-155 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Clos_1144 07e970cc9c6e341cd8faf05be8cd0976 773 Pfam PF03477 ATP cone domain 4 92 6.1E-21 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Clos_1144 07e970cc9c6e341cd8faf05be8cd0976 773 SUPERFAMILY SSF51998 126 748 1.65E-162 T 11-10-2018 Clos_2218 df6faa0149b843945adc7139c66bcd87 245 SUPERFAMILY SSF53187 47 240 3.77E-46 T 11-10-2018 Clos_2218 df6faa0149b843945adc7139c66bcd87 245 SMART SM00646 120 237 4.2E-22 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_2218 df6faa0149b843945adc7139c66bcd87 245 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 49 237 4.0E-49 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_2218 df6faa0149b843945adc7139c66bcd87 245 Gene3D G3DSA:3.40.630.40 44 243 6.5E-53 T 11-10-2018 Clos_2572 436da4f2eb6305080dcd985341670556 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 1.1E-76 T 11-10-2018 Clos_2572 436da4f2eb6305080dcd985341670556 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 1.9E-91 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Clos_2572 436da4f2eb6305080dcd985341670556 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 47.822 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Clos_2572 436da4f2eb6305080dcd985341670556 209 SUPERFAMILY SSF53271 4 207 4.2E-72 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_2572 436da4f2eb6305080dcd985341670556 209 Gene3D G3DSA:3.40.50.2020 1 209 1.5E-83 T 11-10-2018 Clos_1720 8f3732b1576e533652f991bac6c342b6 132 Pfam PF12670 Protein of unknown function (DUF3792) 16 128 2.9E-21 T 11-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane Clos_1720 8f3732b1576e533652f991bac6c342b6 132 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 20 131 1.9E-27 T 11-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane Clos_2395 0ab5c3a1d9a4408ebd9fce177c2b6eba 146 PIRSF PIRSF036409 3 146 7.0E-47 T 11-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Clos_2395 0ab5c3a1d9a4408ebd9fce177c2b6eba 146 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 4 142 7.4E-35 T 11-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Clos_2395 0ab5c3a1d9a4408ebd9fce177c2b6eba 146 SUPERFAMILY SSF52540 4 143 2.67E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2395 0ab5c3a1d9a4408ebd9fce177c2b6eba 146 Gene3D G3DSA:3.40.50.300 1 145 2.1E-14 T 11-10-2018 Clos_0558 5e7f25be179253734e44f28286b58920 210 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 13 203 2.1E-60 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Clos_0558 5e7f25be179253734e44f28286b58920 210 SUPERFAMILY SSF52972 9 203 3.4E-68 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Clos_0558 5e7f25be179253734e44f28286b58920 210 Gene3D G3DSA:3.90.950.10 8 206 9.6E-78 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Clos_0558 5e7f25be179253734e44f28286b58920 210 Hamap MF_01405 dITP/XTP pyrophosphatase. 11 205 48.239 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Clos_0558 5e7f25be179253734e44f28286b58920 210 Pfam PF01725 Ham1 family 14 201 3.2E-58 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Clos_1140 1397ae08367cd1fce97edc3e4132268a 234 Pfam PF02308 MgtC family 11 138 9.3E-39 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_1140 1397ae08367cd1fce97edc3e4132268a 234 PRINTS PR01837 MgtC/SapB protein signature 65 87 6.0E-43 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_1140 1397ae08367cd1fce97edc3e4132268a 234 PRINTS PR01837 MgtC/SapB protein signature 14 33 6.0E-43 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_1140 1397ae08367cd1fce97edc3e4132268a 234 PRINTS PR01837 MgtC/SapB protein signature 33 51 6.0E-43 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_1140 1397ae08367cd1fce97edc3e4132268a 234 PRINTS PR01837 MgtC/SapB protein signature 92 116 6.0E-43 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Clos_0433 baf87032f27de1a9b87057a97c82827f 462 Pfam PF06826 Predicted Permease Membrane Region 288 458 2.0E-35 T 11-10-2018 IPR006512 YidE/YbjL duplication Clos_0433 baf87032f27de1a9b87057a97c82827f 462 Pfam PF06826 Predicted Permease Membrane Region 20 247 2.8E-21 T 11-10-2018 IPR006512 YidE/YbjL duplication Clos_0433 baf87032f27de1a9b87057a97c82827f 462 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 293 445 5.5E-23 T 11-10-2018 IPR006512 YidE/YbjL duplication Clos_0099 8beb45778819a02fe58554dcbe596064 381 Pfam PF01391 Collagen triple helix repeat (20 copies) 190 247 5.4E-7 T 11-10-2018 IPR008160 Collagen triple helix repeat Clos_0099 8beb45778819a02fe58554dcbe596064 381 Pfam PF01391 Collagen triple helix repeat (20 copies) 139 196 3.4E-7 T 11-10-2018 IPR008160 Collagen triple helix repeat Clos_0099 8beb45778819a02fe58554dcbe596064 381 Pfam PF01391 Collagen triple helix repeat (20 copies) 85 143 8.8E-8 T 11-10-2018 IPR008160 Collagen triple helix repeat Clos_0099 8beb45778819a02fe58554dcbe596064 381 Pfam PF01391 Collagen triple helix repeat (20 copies) 33 85 1.7E-7 T 11-10-2018 IPR008160 Collagen triple helix repeat Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 Hamap MF_00551 Uridine kinase [udk]. 4 208 41.14 T 11-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 194 8.1E-46 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 SUPERFAMILY SSF52540 4 199 3.41E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 TIGRFAM TIGR00235 udk: uridine kinase 5 207 8.0E-85 T 11-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 PRINTS PR00988 Uridine kinase signature 138 148 1.6E-36 T 11-10-2018 Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 PRINTS PR00988 Uridine kinase signature 82 97 1.6E-36 T 11-10-2018 Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 PRINTS PR00988 Uridine kinase signature 7 24 1.6E-36 T 11-10-2018 Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 PRINTS PR00988 Uridine kinase signature 174 187 1.6E-36 T 11-10-2018 Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 PRINTS PR00988 Uridine kinase signature 152 163 1.6E-36 T 11-10-2018 Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 PRINTS PR00988 Uridine kinase signature 37 48 1.6E-36 T 11-10-2018 Clos_1655 3d34182cfffd4309db5bf08689f2c495 214 Gene3D G3DSA:3.40.50.300 3 213 9.1E-67 T 11-10-2018 Clos_0699 fb07efa619e26172ad7e4eae1ec08630 193 Gene3D G3DSA:2.60.60.30 19 187 3.4E-72 T 11-10-2018 Clos_0699 fb07efa619e26172ad7e4eae1ec08630 193 Pfam PF02342 TerD domain 1 188 1.7E-84 T 11-10-2018 IPR003325 TerD domain Clos_2521 12df9f6e8dac57711abb173a0cddb66d 522 PRINTS PR01005 Flagellar hook-associated protein signature 483 507 4.2E-6 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Clos_2521 12df9f6e8dac57711abb173a0cddb66d 522 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 4.2E-6 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Clos_2521 12df9f6e8dac57711abb173a0cddb66d 522 SUPERFAMILY SSF64518 140 516 9.81E-21 T 11-10-2018 Clos_2521 12df9f6e8dac57711abb173a0cddb66d 522 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 461 515 1.3E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Clos_2521 12df9f6e8dac57711abb173a0cddb66d 522 Pfam PF00460 Flagella basal body rod protein 9 37 2.3E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Clos_2521 12df9f6e8dac57711abb173a0cddb66d 522 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 515 6.0E-108 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Clos_0949 f5e587ebeee0070f9ba5c18335ccd4d4 338 Pfam PF01032 FecCD transport family 17 332 9.5E-80 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_0949 f5e587ebeee0070f9ba5c18335ccd4d4 338 Gene3D G3DSA:1.10.3470.10 4 338 1.9E-88 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0949 f5e587ebeee0070f9ba5c18335ccd4d4 338 SUPERFAMILY SSF81345 4 332 1.22E-67 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_2677 448682eb5e7ad601c3e88e1d45ba9952 620 SUPERFAMILY SSF90123 38 362 4.32E-88 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_2677 448682eb5e7ad601c3e88e1d45ba9952 620 Pfam PF00005 ABC transporter 396 544 1.6E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2677 448682eb5e7ad601c3e88e1d45ba9952 620 Gene3D G3DSA:1.20.1560.10 25 365 2.6E-106 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_2677 448682eb5e7ad601c3e88e1d45ba9952 620 Pfam PF00664 ABC transporter transmembrane region 55 332 1.0E-60 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_2677 448682eb5e7ad601c3e88e1d45ba9952 620 SUPERFAMILY SSF52540 368 615 3.24E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2677 448682eb5e7ad601c3e88e1d45ba9952 620 ProSitePatterns PS00211 ABC transporters family signature. 516 530 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2677 448682eb5e7ad601c3e88e1d45ba9952 620 Gene3D G3DSA:3.40.50.300 375 619 3.0E-90 T 11-10-2018 Clos_2677 448682eb5e7ad601c3e88e1d45ba9952 620 SMART SM00382 404 616 5.2E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2143 8ce6c614235190948a649295fe41ea9e 704 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 9 206 2.2E-63 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Clos_2143 8ce6c614235190948a649295fe41ea9e 704 SMART SM00790 7 207 8.0E-80 T 11-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Clos_2143 8ce6c614235190948a649295fe41ea9e 704 SUPERFAMILY SSF56228 5 210 7.85E-57 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Clos_2143 8ce6c614235190948a649295fe41ea9e 704 SUPERFAMILY SSF48310 265 692 4.84E-50 T 11-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Clos_2143 8ce6c614235190948a649295fe41ea9e 704 Gene3D G3DSA:1.10.599.10 460 692 1.5E-18 T 11-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Clos_2143 8ce6c614235190948a649295fe41ea9e 704 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 231 689 2.9E-71 T 11-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Clos_2143 8ce6c614235190948a649295fe41ea9e 704 Gene3D G3DSA:3.60.9.10 4 211 4.6E-68 T 11-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Clos_1590 3460c6ff72b959a49071b4894fb84051 275 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 270 9.5E-108 T 11-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Clos_1590 3460c6ff72b959a49071b4894fb84051 275 SUPERFAMILY SSF53167 5 272 3.53E-94 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Clos_1590 3460c6ff72b959a49071b4894fb84051 275 Pfam PF01048 Phosphorylase superfamily 25 270 4.0E-52 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Clos_1590 3460c6ff72b959a49071b4894fb84051 275 Gene3D G3DSA:3.40.50.1580 1 272 1.4E-109 T 11-10-2018 Clos_1590 3460c6ff72b959a49071b4894fb84051 275 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 270 2.0E-104 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Clos_1590 3460c6ff72b959a49071b4894fb84051 275 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 11-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 Clos_1590 3460c6ff72b959a49071b4894fb84051 275 PIRSF PIRSF000477 1 273 2.4E-107 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 Clos_1107 e441ca5afaceab0357740d1271ad236f 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 2.8E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1107 e441ca5afaceab0357740d1271ad236f 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 2.8E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1107 e441ca5afaceab0357740d1271ad236f 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 2.8E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1107 e441ca5afaceab0357740d1271ad236f 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 31 42 2.8E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1107 e441ca5afaceab0357740d1271ad236f 95 Pfam PF01022 Bacterial regulatory protein, arsR family 17 63 4.9E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1107 e441ca5afaceab0357740d1271ad236f 95 SUPERFAMILY SSF46785 5 91 1.45E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1107 e441ca5afaceab0357740d1271ad236f 95 SMART SM00418 10 87 4.0E-28 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1107 e441ca5afaceab0357740d1271ad236f 95 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 33 51 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Clos_1107 e441ca5afaceab0357740d1271ad236f 95 Gene3D G3DSA:1.10.10.10 1 92 1.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1842 df6b756fbb0a5c1f035cb5e4c27ec161 156 Pfam PF07670 Nucleoside recognition 17 104 2.4E-6 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_2495 3f2248381cf0794329195200630bf60b 159 Pfam PF02623 FliW protein 17 136 8.1E-42 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Clos_2495 3f2248381cf0794329195200630bf60b 159 SUPERFAMILY SSF141457 2 142 9.02E-49 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Clos_2495 3f2248381cf0794329195200630bf60b 159 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 15 140 26.278 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Clos_2495 3f2248381cf0794329195200630bf60b 159 Gene3D G3DSA:2.30.290.10 1 146 3.7E-54 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Clos_2729 dc3d23f64809b4732e8c992d11af2515 324 Gene3D G3DSA:3.40.630.30 14 161 1.3E-8 T 11-10-2018 Clos_2729 dc3d23f64809b4732e8c992d11af2515 324 Pfam PF00583 Acetyltransferase (GNAT) family 228 311 7.0E-15 T 11-10-2018 IPR000182 GNAT domain Clos_2729 dc3d23f64809b4732e8c992d11af2515 324 Gene3D G3DSA:3.40.630.30 163 317 5.7E-28 T 11-10-2018 Clos_2729 dc3d23f64809b4732e8c992d11af2515 324 SUPERFAMILY SSF55729 11 321 9.4E-42 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1081 9e3ffbcd5ce3f73daf05979bf087c9d1 260 Pfam PF02535 ZIP Zinc transporter 116 255 2.0E-27 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Clos_2809 208499a0818129c6982b1349bf30b4d2 261 Pfam PF00756 Putative esterase 22 254 1.0E-31 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Clos_2809 208499a0818129c6982b1349bf30b4d2 261 Gene3D G3DSA:3.40.50.1820 14 261 7.1E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_2809 208499a0818129c6982b1349bf30b4d2 261 SUPERFAMILY SSF53474 21 259 1.23E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 Gene3D G3DSA:3.40.50.300 2 240 1.0E-56 T 11-10-2018 Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 SUPERFAMILY SSF52540 244 491 4.6E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 Gene3D G3DSA:3.40.50.300 257 498 2.1E-38 T 11-10-2018 Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 SMART SM00382 29 218 7.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 SMART SM00382 283 480 13.0 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 SUPERFAMILY SSF52540 4 228 4.09E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 Pfam PF00005 ABC transporter 274 431 1.5E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0964 08aec6944a3e9a7bbe1609ae3ef021e2 511 Pfam PF00005 ABC transporter 21 170 2.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0647 c13874369ca6490c81e7bf175208c83b 280 Gene3D G3DSA:1.10.1740.10 18 123 9.4E-15 T 11-10-2018 Clos_0647 c13874369ca6490c81e7bf175208c83b 280 SUPERFAMILY SSF88659 129 182 1.18E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Clos_0647 c13874369ca6490c81e7bf175208c83b 280 Pfam PF12671 Putative amidase domain 179 247 9.4E-7 T 11-10-2018 IPR024301 Putative amidase domain Clos_0647 c13874369ca6490c81e7bf175208c83b 280 SUPERFAMILY SSF88946 26 116 1.02E-15 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0647 c13874369ca6490c81e7bf175208c83b 280 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 178 1.4E-19 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Clos_0647 c13874369ca6490c81e7bf175208c83b 280 Gene3D G3DSA:1.10.10.10 124 180 5.1E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0647 c13874369ca6490c81e7bf175208c83b 280 Pfam PF04542 Sigma-70 region 2 34 103 6.5E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Clos_0647 c13874369ca6490c81e7bf175208c83b 280 Pfam PF08281 Sigma-70, region 4 124 175 3.1E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Clos_0186 bd460142d88c105d227800eda5f07fa3 533 Gene3D G3DSA:1.10.287.950 269 532 4.0E-53 T 11-10-2018 Clos_0186 bd460142d88c105d227800eda5f07fa3 533 SMART SM00283 257 532 6.6E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0186 bd460142d88c105d227800eda5f07fa3 533 Gene3D G3DSA:1.20.1480.50 135 234 9.9E-6 T 11-10-2018 Clos_0186 bd460142d88c105d227800eda5f07fa3 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 485 4.4E-33 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0186 bd460142d88c105d227800eda5f07fa3 533 SUPERFAMILY SSF58104 204 531 1.83E-60 T 11-10-2018 Clos_0186 bd460142d88c105d227800eda5f07fa3 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 21 5.9E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Clos_0186 bd460142d88c105d227800eda5f07fa3 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 355 382 5.9E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Clos_0186 bd460142d88c105d227800eda5f07fa3 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 5.9E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Clos_2698 42e6a82ed7ed680aa7b85cc3b28da5ed 439 Pfam PF05525 Branched-chain amino acid transport protein 6 425 1.4E-129 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 Clos_2698 42e6a82ed7ed680aa7b85cc3b28da5ed 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 4.2E-114 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 Clos_0024 9425be07d3a6f38daf9eb16e8b56a5f4 62 Pfam PF06107 Bacterial protein of unknown function (DUF951) 6 58 9.4E-28 T 11-10-2018 IPR009296 Protein of unknown function DUF951 Clos_0024 9425be07d3a6f38daf9eb16e8b56a5f4 62 PIRSF PIRSF037263 1 61 7.4E-26 T 11-10-2018 IPR009296 Protein of unknown function DUF951 Clos_0919 a877f0ed66cd8056a233449b8b11c6f3 275 Gene3D G3DSA:3.40.50.1000 4 265 1.1E-75 T 11-10-2018 IPR023214 HAD superfamily Clos_0919 a877f0ed66cd8056a233449b8b11c6f3 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 268 1.7E-59 T 11-10-2018 IPR000150 Cof family GO:0016787 Clos_0919 a877f0ed66cd8056a233449b8b11c6f3 275 SUPERFAMILY SSF56784 1 273 8.62E-71 T 11-10-2018 IPR036412 HAD-like superfamily Clos_0919 a877f0ed66cd8056a233449b8b11c6f3 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 268 6.4E-69 T 11-10-2018 Clos_0919 a877f0ed66cd8056a233449b8b11c6f3 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 11-10-2018 Clos_0919 a877f0ed66cd8056a233449b8b11c6f3 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 241 7.5E-31 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Clos_0919 a877f0ed66cd8056a233449b8b11c6f3 275 Gene3D G3DSA:3.30.1240.10 84 197 1.1E-75 T 11-10-2018 Clos_0955 7e03f260b003ee84fac4baa19dc59c49 105 SUPERFAMILY SSF52833 2 105 9.92E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0955 7e03f260b003ee84fac4baa19dc59c49 105 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Clos_0955 7e03f260b003ee84fac4baa19dc59c49 105 Gene3D G3DSA:3.40.30.10 1 105 2.4E-26 T 11-10-2018 Clos_0955 7e03f260b003ee84fac4baa19dc59c49 105 PIRSF PIRSF000077 1 105 3.3E-23 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Clos_0955 7e03f260b003ee84fac4baa19dc59c49 105 Pfam PF00085 Thioredoxin 3 103 9.2E-23 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Clos_0178 d800898d1b6b8ccc52fd66638c9e0dec 494 Gene3D G3DSA:3.50.50.60 45 491 7.0E-151 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0178 d800898d1b6b8ccc52fd66638c9e0dec 494 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 47 66 2.3E-5 T 11-10-2018 Clos_0178 d800898d1b6b8ccc52fd66638c9e0dec 494 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 464 2.3E-5 T 11-10-2018 Clos_0178 d800898d1b6b8ccc52fd66638c9e0dec 494 SUPERFAMILY SSF56425 287 438 2.99E-38 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_0178 d800898d1b6b8ccc52fd66638c9e0dec 494 SUPERFAMILY SSF51905 42 494 2.41E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0178 d800898d1b6b8ccc52fd66638c9e0dec 494 Gene3D G3DSA:3.90.700.10 283 434 7.0E-151 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_0178 d800898d1b6b8ccc52fd66638c9e0dec 494 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 46 490 9.8E-157 T 11-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 Clos_0178 d800898d1b6b8ccc52fd66638c9e0dec 494 Pfam PF00890 FAD binding domain 46 477 3.1E-93 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Clos_0923 db7577adf54090d9b8fad68f3a92076a 257 Pfam PF13354 Beta-lactamase enzyme family 25 229 7.2E-64 T 11-10-2018 Clos_0923 db7577adf54090d9b8fad68f3a92076a 257 SUPERFAMILY SSF56601 2 254 9.22E-61 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Clos_0923 db7577adf54090d9b8fad68f3a92076a 257 PRINTS PR00118 Beta-lactamase class A signature 5 29 1.1E-7 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Clos_0923 db7577adf54090d9b8fad68f3a92076a 257 PRINTS PR00118 Beta-lactamase class A signature 114 138 1.1E-7 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Clos_0923 db7577adf54090d9b8fad68f3a92076a 257 PRINTS PR00118 Beta-lactamase class A signature 79 104 1.1E-7 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Clos_0923 db7577adf54090d9b8fad68f3a92076a 257 PRINTS PR00118 Beta-lactamase class A signature 36 53 1.1E-7 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Clos_0923 db7577adf54090d9b8fad68f3a92076a 257 PRINTS PR00118 Beta-lactamase class A signature 191 206 1.1E-7 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 Clos_0923 db7577adf54090d9b8fad68f3a92076a 257 Gene3D G3DSA:3.40.710.10 1 256 3.0E-78 T 11-10-2018 Clos_0642 807d8f5c19c229c7d7ec5b6a03432de6 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_0642 807d8f5c19c229c7d7ec5b6a03432de6 225 SUPERFAMILY SSF52141 3 222 2.62E-96 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_0642 807d8f5c19c229c7d7ec5b6a03432de6 225 SMART SM00986 50 210 6.8E-38 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_0642 807d8f5c19c229c7d7ec5b6a03432de6 225 SMART SM00987 50 210 6.8E-38 T 11-10-2018 Clos_0642 807d8f5c19c229c7d7ec5b6a03432de6 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 221 41.134 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_0642 807d8f5c19c229c7d7ec5b6a03432de6 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 213 1.1E-84 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_0642 807d8f5c19c229c7d7ec5b6a03432de6 225 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 1.6E-25 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_0642 807d8f5c19c229c7d7ec5b6a03432de6 225 Gene3D G3DSA:3.40.470.10 2 225 1.4E-100 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Clos_2849 f35738c5c39bd3b76bb74f3a430d622d 187 SUPERFAMILY SSF50475 1 181 7.48E-38 T 11-10-2018 Clos_2849 f35738c5c39bd3b76bb74f3a430d622d 187 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 15 171 3.2E-20 T 11-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Clos_2849 f35738c5c39bd3b76bb74f3a430d622d 187 Gene3D G3DSA:2.30.110.10 1 177 1.2E-39 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Clos_0305 5c3b617ec337aee70559403cb3ee8fc7 86 Pfam PF03692 Putative zinc- or iron-chelating domain 2 65 2.6E-5 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Clos_0896 0fe7a962dc21684368f74c3987d64651 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 7.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_0896 0fe7a962dc21684368f74c3987d64651 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 7.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_0896 0fe7a962dc21684368f74c3987d64651 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.1E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_0896 0fe7a962dc21684368f74c3987d64651 95 Pfam PF12840 Helix-turn-helix domain 14 72 4.5E-13 T 11-10-2018 Clos_0896 0fe7a962dc21684368f74c3987d64651 95 SMART SM00418 15 94 2.9E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_0896 0fe7a962dc21684368f74c3987d64651 95 Gene3D G3DSA:1.10.10.10 1 94 6.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0896 0fe7a962dc21684368f74c3987d64651 95 SUPERFAMILY SSF46785 4 92 6.23E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1244 4e7e8835cfac0e7a0783269e4917227c 91 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 7 90 2.7E-30 T 11-10-2018 IPR022477 Sporulation protein YqfC Clos_1244 4e7e8835cfac0e7a0783269e4917227c 91 Pfam PF07873 YabP family 26 89 1.2E-18 T 11-10-2018 IPR022476 Sporulation protein YabP/YqfC Clos_0634 f4fed859e842c8d0f14112a1ccf38160 139 Pfam PF02566 OsmC-like protein 35 133 3.3E-18 T 11-10-2018 IPR003718 OsmC/Ohr family Clos_0634 f4fed859e842c8d0f14112a1ccf38160 139 Gene3D G3DSA:3.30.300.20 6 139 1.1E-37 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Clos_0634 f4fed859e842c8d0f14112a1ccf38160 139 SUPERFAMILY SSF82784 5 135 2.09E-33 T 11-10-2018 IPR036102 OsmC/Ohr superfamily Clos_2543 bfa7b7f8f8a06d19b24688f26d18189f 458 PIRSF PIRSF002746 6 458 4.7E-144 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Clos_2543 bfa7b7f8f8a06d19b24688f26d18189f 458 Pfam PF02447 GntP family permease 11 455 1.7E-132 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Clos_2543 bfa7b7f8f8a06d19b24688f26d18189f 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 12 456 1.6E-105 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Clos_2449 5ed0ea1eb3fd92fa798a2f9ee33627e4 228 Pfam PF04474 Protein of unknown function (DUF554) 2 221 9.9E-78 T 11-10-2018 IPR007563 Protein of unknown function DUF554 Clos_0685 fd3f1c3cf31cd9fa4f795bf07bdba589 574 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0685 fd3f1c3cf31cd9fa4f795bf07bdba589 574 Pfam PF00005 ABC transporter 347 496 2.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0685 fd3f1c3cf31cd9fa4f795bf07bdba589 574 Gene3D G3DSA:3.40.50.300 322 572 4.5E-87 T 11-10-2018 Clos_0685 fd3f1c3cf31cd9fa4f795bf07bdba589 574 SMART SM00382 356 542 2.9E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0685 fd3f1c3cf31cd9fa4f795bf07bdba589 574 SUPERFAMILY SSF52540 326 566 3.13E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0685 fd3f1c3cf31cd9fa4f795bf07bdba589 574 SUPERFAMILY SSF90123 9 318 3.92E-50 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_0685 fd3f1c3cf31cd9fa4f795bf07bdba589 574 Pfam PF00664 ABC transporter transmembrane region 31 285 4.9E-26 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Clos_0685 fd3f1c3cf31cd9fa4f795bf07bdba589 574 Gene3D G3DSA:1.20.1560.10 5 317 1.3E-42 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Clos_1715 cf21a3d03a9cf325af4ccde75a5a8fda 172 SUPERFAMILY SSF53271 2 167 1.21E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_1715 cf21a3d03a9cf325af4ccde75a5a8fda 172 Pfam PF00156 Phosphoribosyl transferase domain 36 143 6.8E-13 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Clos_1715 cf21a3d03a9cf325af4ccde75a5a8fda 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.506 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Clos_1715 cf21a3d03a9cf325af4ccde75a5a8fda 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 1.2E-69 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Clos_1715 cf21a3d03a9cf325af4ccde75a5a8fda 172 Gene3D G3DSA:3.40.50.2020 1 171 1.6E-60 T 11-10-2018 Clos_1597 8ccb6f180909bf34135170df13ab4fca 270 Pfam PF00953 Glycosyl transferase family 4 72 226 5.3E-6 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Clos_2261 844c597e113804ed1756b2743ac469a4 298 Pfam PF02687 FtsX-like permease family 200 295 9.5E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_2261 844c597e113804ed1756b2743ac469a4 298 PIRSF PIRSF003097 1 298 2.4E-84 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Clos_2261 844c597e113804ed1756b2743ac469a4 298 Gene3D G3DSA:3.30.70.3040 56 157 8.9E-9 T 11-10-2018 Clos_0301 80e3de8c578693904ef616f27742fd02 239 SMART SM00481 5 79 3.7E-16 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Clos_0301 80e3de8c578693904ef616f27742fd02 239 SUPERFAMILY SSF89550 4 224 1.03E-54 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Clos_0301 80e3de8c578693904ef616f27742fd02 239 Gene3D G3DSA:3.20.20.140 4 237 6.5E-63 T 11-10-2018 Clos_0301 80e3de8c578693904ef616f27742fd02 239 Pfam PF02811 PHP domain 6 136 1.3E-6 T 11-10-2018 IPR004013 PHP domain GO:0003824 Clos_0649 cb67db07de7d200b0cfeb2537881c435 130 Gene3D G3DSA:1.10.10.10 10 127 6.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0649 cb67db07de7d200b0cfeb2537881c435 130 SUPERFAMILY SSF46785 7 78 3.11E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0649 cb67db07de7d200b0cfeb2537881c435 130 SMART SM00345 17 76 4.0E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_0649 cb67db07de7d200b0cfeb2537881c435 130 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 2.8E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Clos_2023 4cacbff05c96dc2b7b7b28e2bf41faf7 410 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 248 261 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Clos_2023 4cacbff05c96dc2b7b7b28e2bf41faf7 410 Gene3D G3DSA:3.90.1150.10 28 390 3.7E-88 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_2023 4cacbff05c96dc2b7b7b28e2bf41faf7 410 SUPERFAMILY SSF53383 29 400 9.35E-78 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_2023 4cacbff05c96dc2b7b7b28e2bf41faf7 410 Pfam PF00155 Aminotransferase class I and II 45 393 2.1E-42 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_2023 4cacbff05c96dc2b7b7b28e2bf41faf7 410 Gene3D G3DSA:3.40.640.10 55 296 3.7E-88 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_2676 8ec2901cac4d23c254cf29bb66d7c92e 183 Pfam PF02417 Chromate transporter 5 169 2.4E-50 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Clos_2235 3309181f7c19dcdcd57726e04ee8a050 501 Pfam PF00665 Integrase core domain 128 254 3.0E-9 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Clos_2235 3309181f7c19dcdcd57726e04ee8a050 501 SUPERFAMILY SSF53098 161 264 5.56E-5 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_2773 686723c73bf9c06dfd2ace84a0119f59 280 SMART SM00422 2 72 1.6E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2773 686723c73bf9c06dfd2ace84a0119f59 280 Pfam PF14526 Integron-associated effector binding protein 124 272 4.4E-10 T 11-10-2018 IPR029441 Integron-associated effector binding protein Clos_2773 686723c73bf9c06dfd2ace84a0119f59 280 Pfam PF13411 MerR HTH family regulatory protein 2 70 6.4E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2773 686723c73bf9c06dfd2ace84a0119f59 280 SUPERFAMILY SSF46955 2 108 4.76E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_2773 686723c73bf9c06dfd2ace84a0119f59 280 SUPERFAMILY SSF55136 122 275 5.41E-14 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_2773 686723c73bf9c06dfd2ace84a0119f59 280 Gene3D G3DSA:1.10.1660.10 1 123 1.3E-24 T 11-10-2018 Clos_2773 686723c73bf9c06dfd2ace84a0119f59 280 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_2773 686723c73bf9c06dfd2ace84a0119f59 280 Gene3D G3DSA:3.20.80.10 124 277 4.7E-16 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Clos_2773 686723c73bf9c06dfd2ace84a0119f59 280 SMART SM00871 120 273 2.8E-12 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding Clos_0914 cdd1fe8109d416b53b17efd083258d79 432 Pfam PF02450 Lecithin:cholesterol acyltransferase 37 142 3.9E-10 T 11-10-2018 IPR003386 Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase GO:0006629|GO:0008374 Clos_0914 cdd1fe8109d416b53b17efd083258d79 432 SUPERFAMILY SSF53474 7 315 4.61E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_0914 cdd1fe8109d416b53b17efd083258d79 432 Gene3D G3DSA:3.40.50.1820 1 170 1.8E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Clos_2011 963f32a24350152d62535d383c470c3f 188 ProSitePatterns PS00761 Signal peptidases I signature 3. 144 157 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Clos_2011 963f32a24350152d62535d383c470c3f 188 Gene3D G3DSA:2.10.109.10 47 179 1.3E-32 T 11-10-2018 Clos_2011 963f32a24350152d62535d383c470c3f 188 SUPERFAMILY SSF51306 39 187 1.46E-43 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Clos_2011 963f32a24350152d62535d383c470c3f 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 39 55 2.5E-19 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_2011 963f32a24350152d62535d383c470c3f 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 95 107 2.5E-19 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_2011 963f32a24350152d62535d383c470c3f 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 139 158 2.5E-19 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_2011 963f32a24350152d62535d383c470c3f 188 Pfam PF00717 Peptidase S24-like 46 118 2.3E-14 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Clos_2011 963f32a24350152d62535d383c470c3f 188 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 23 182 7.5E-45 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Clos_2011 963f32a24350152d62535d383c470c3f 188 ProSitePatterns PS00760 Signal peptidases I lysine active site. 97 109 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Clos_1879 7ae10fbc0a3826e5f8f05459a955b00a 609 SUPERFAMILY SSF52540 192 589 6.37E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1879 7ae10fbc0a3826e5f8f05459a955b00a 609 Pfam PF01935 Domain of unknown function DUF87 242 298 7.3E-6 T 11-10-2018 IPR002789 Helicase HerA, central domain Clos_1879 7ae10fbc0a3826e5f8f05459a955b00a 609 Gene3D G3DSA:1.10.8.730 306 438 1.2E-40 T 11-10-2018 Clos_0870 c168a930dabce67decfb19f8b5201c1d 323 Pfam PF11392 Protein of unknown function (DUF2877) 194 307 2.6E-26 T 11-10-2018 IPR021530 Protein of unknown function DUF2877 Clos_0281 b0fe76258eb8ae574fbe27c3d13f60c9 477 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 22 286 1.7E-36 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Clos_0281 b0fe76258eb8ae574fbe27c3d13f60c9 477 Gene3D G3DSA:3.40.630.40 297 476 1.3E-50 T 11-10-2018 Clos_0281 b0fe76258eb8ae574fbe27c3d13f60c9 477 Pfam PF08486 Stage II sporulation protein 14 119 3.2E-12 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Clos_0281 b0fe76258eb8ae574fbe27c3d13f60c9 477 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 302 471 5.2E-42 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_0281 b0fe76258eb8ae574fbe27c3d13f60c9 477 SUPERFAMILY SSF53187 300 475 1.82E-45 T 11-10-2018 Clos_0281 b0fe76258eb8ae574fbe27c3d13f60c9 477 SMART SM00646 361 471 3.5E-24 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Clos_1355 8ecb1af22c33a309d94410875c256fdd 331 Gene3D G3DSA:3.40.1340.10 95 229 6.8E-5 T 11-10-2018 IPR036710 RNA polymerase Rpb5, N-terminal domain superfamily GO:0003677|GO:0003899|GO:0005634|GO:0006351 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Clos_1355 8ecb1af22c33a309d94410875c256fdd 331 Pfam PF04471 Restriction endonuclease 124 231 3.5E-9 T 11-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Clos_1287 fbf48be607a54c8d80152400315fa6f5 69 SMART SM00530 4 59 0.008 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1287 fbf48be607a54c8d80152400315fa6f5 69 Pfam PF01381 Helix-turn-helix 23 59 1.4E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_1287 fbf48be607a54c8d80152400315fa6f5 69 SUPERFAMILY SSF47413 3 63 2.17E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_1287 fbf48be607a54c8d80152400315fa6f5 69 Gene3D G3DSA:1.10.260.40 1 69 1.0E-10 T 11-10-2018 Clos_2781 96a81343a4fdb660b25237a69754e119 487 Pfam PF07435 YycH protein 4 179 1.7E-6 T 11-10-2018 IPR009996 Regulatory protein YycH Clos_0025 fb11b3eeddcd2d91b51f21b6871b2e02 391 Gene3D G3DSA:3.40.640.10 62 282 2.8E-143 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Clos_0025 fb11b3eeddcd2d91b51f21b6871b2e02 391 Pfam PF00155 Aminotransferase class I and II 55 383 5.0E-39 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Clos_0025 fb11b3eeddcd2d91b51f21b6871b2e02 391 SUPERFAMILY SSF53383 2 390 4.95E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Clos_0025 fb11b3eeddcd2d91b51f21b6871b2e02 391 Gene3D G3DSA:3.90.1150.10 15 387 2.8E-143 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Clos_0913 0c19c2bbc0ccafb044aa9c3df71f4ae2 229 Gene3D G3DSA:1.25.40.10 89 228 4.9E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Clos_0913 0c19c2bbc0ccafb044aa9c3df71f4ae2 229 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 5 216 9.5E-76 T 11-10-2018 IPR018708 Protein of unknown function DUF2225 Clos_0244 b4896497fd1c3caf31cf9683c9c352b9 430 PIRSF PIRSF006603 1 429 4.7E-143 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0244 b4896497fd1c3caf31cf9683c9c352b9 430 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 395 5.7E-98 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0244 b4896497fd1c3caf31cf9683c9c352b9 430 Pfam PF01554 MatE 1 159 2.7E-35 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0244 b4896497fd1c3caf31cf9683c9c352b9 430 Pfam PF01554 MatE 220 379 4.2E-33 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_1672 bd54043db21faacbc1ce8b8215ab96ac 259 Pfam PF00188 Cysteine-rich secretory protein family 147 253 4.8E-18 T 11-10-2018 IPR014044 CAP domain Clos_1672 bd54043db21faacbc1ce8b8215ab96ac 259 Gene3D G3DSA:3.40.33.10 3 258 2.2E-59 T 11-10-2018 IPR035940 CAP superfamily Clos_1672 bd54043db21faacbc1ce8b8215ab96ac 259 SUPERFAMILY SSF55797 141 252 1.44E-18 T 11-10-2018 IPR035940 CAP superfamily Clos_1672 bd54043db21faacbc1ce8b8215ab96ac 259 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 139 257 1.4E-51 T 11-10-2018 IPR014258 CAP domain, YkwD-like Clos_1838 5a61d099c1c2c5bf2f41d12141388e90 530 PIRSF PIRSF038984 1 530 6.3E-238 T 11-10-2018 IPR028348 FAD dependent protein Clos_1838 5a61d099c1c2c5bf2f41d12141388e90 530 Gene3D G3DSA:3.30.70.2700 1 80 6.2E-21 T 11-10-2018 Clos_1838 5a61d099c1c2c5bf2f41d12141388e90 530 SUPERFAMILY SSF51905 98 524 3.24E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1838 5a61d099c1c2c5bf2f41d12141388e90 530 Gene3D G3DSA:3.50.50.60 462 529 2.3E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1838 5a61d099c1c2c5bf2f41d12141388e90 530 Gene3D G3DSA:3.50.50.60 84 302 8.6E-81 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0840 d5a396d89290fdbdbf2510d97b9fd350 414 SUPERFAMILY SSF103473 13 408 1.96E-37 T 11-10-2018 IPR036259 MFS transporter superfamily Clos_0840 d5a396d89290fdbdbf2510d97b9fd350 414 Gene3D G3DSA:1.20.1250.20 9 403 1.8E-32 T 11-10-2018 Clos_0840 d5a396d89290fdbdbf2510d97b9fd350 414 Pfam PF07690 Major Facilitator Superfamily 25 367 7.4E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Clos_1540 f64518995e1f7c1ea25210e8035fee6e 349 SUPERFAMILY SSF52821 8 133 2.75E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_1540 f64518995e1f7c1ea25210e8035fee6e 349 Pfam PF13238 AAA domain 143 260 8.6E-7 T 11-10-2018 Clos_1540 f64518995e1f7c1ea25210e8035fee6e 349 Pfam PF00581 Rhodanese-like domain 14 126 4.4E-12 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_1540 f64518995e1f7c1ea25210e8035fee6e 349 SUPERFAMILY SSF52540 138 340 5.52E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1540 f64518995e1f7c1ea25210e8035fee6e 349 SMART SM00450 5 131 3.2E-15 T 11-10-2018 IPR001763 Rhodanese-like domain Clos_1540 f64518995e1f7c1ea25210e8035fee6e 349 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 322 3.1E-94 T 11-10-2018 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase GO:0016785|GO:0043828|GO:0070329 Clos_1540 f64518995e1f7c1ea25210e8035fee6e 349 Gene3D G3DSA:3.40.250.10 2 132 8.3E-45 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Clos_0917 4907f1287299117f5e2c6b1e985af562 263 Pfam PF00005 ABC transporter 20 169 7.2E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0917 4907f1287299117f5e2c6b1e985af562 263 SUPERFAMILY SSF52540 4 235 6.76E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0917 4907f1287299117f5e2c6b1e985af562 263 Gene3D G3DSA:3.40.50.300 2 257 3.4E-66 T 11-10-2018 Clos_0917 4907f1287299117f5e2c6b1e985af562 263 SMART SM00382 29 217 5.8E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0917 4907f1287299117f5e2c6b1e985af562 263 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0474 0b95fb4a21626e14f20930991b03f576 170 Pfam PF05991 YacP-like NYN domain 5 168 7.3E-58 T 11-10-2018 IPR010298 Protein of unknown function DUF901 Clos_2432 573551d0eed92b3af980160b78bfb585 213 Gene3D G3DSA:1.10.150.240 20 90 6.7E-30 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Clos_2432 573551d0eed92b3af980160b78bfb585 213 SUPERFAMILY SSF56784 4 209 1.68E-34 T 11-10-2018 IPR036412 HAD-like superfamily Clos_2432 573551d0eed92b3af980160b78bfb585 213 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 178 2.0E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Clos_2432 573551d0eed92b3af980160b78bfb585 213 Gene3D G3DSA:3.40.50.1000 9 193 6.7E-30 T 11-10-2018 IPR023214 HAD superfamily Clos_2432 573551d0eed92b3af980160b78bfb585 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 185 9.4E-25 T 11-10-2018 Clos_1981 faf701b7218eefe43d84ebe0caec07b0 200 Pfam PF04286 Protein of unknown function (DUF445) 91 199 8.4E-17 T 11-10-2018 IPR007383 Protein of unknown function DUF445 Clos_1981 faf701b7218eefe43d84ebe0caec07b0 200 Pfam PF04286 Protein of unknown function (DUF445) 11 139 8.1E-22 T 11-10-2018 IPR007383 Protein of unknown function DUF445 Clos_1578 3b166a1316ec54363f71835114fa425a 426 Gene3D G3DSA:3.50.50.60 2 182 1.6E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1578 3b166a1316ec54363f71835114fa425a 426 Pfam PF01134 Glucose inhibited division protein A 3 233 1.1E-24 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Clos_1578 3b166a1316ec54363f71835114fa425a 426 Pfam PF01134 Glucose inhibited division protein A 273 351 1.2E-12 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Clos_1578 3b166a1316ec54363f71835114fa425a 426 Gene3D G3DSA:3.50.50.60 273 395 7.4E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_1578 3b166a1316ec54363f71835114fa425a 426 SUPERFAMILY SSF51905 2 344 1.55E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Clos_0401 833fb72f3c711fee7741c610093e19eb 309 Pfam PF02016 LD-carboxypeptidase 13 291 8.9E-83 T 11-10-2018 IPR003507 Peptidase family S66 Clos_0401 833fb72f3c711fee7741c610093e19eb 309 PIRSF PIRSF028757 1 307 2.1E-91 T 11-10-2018 IPR003507 Peptidase family S66 Clos_0401 833fb72f3c711fee7741c610093e19eb 309 SUPERFAMILY SSF141986 141 300 1.29E-44 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Clos_0401 833fb72f3c711fee7741c610093e19eb 309 Gene3D G3DSA:3.50.30.60 155 306 7.2E-45 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Clos_0401 833fb72f3c711fee7741c610093e19eb 309 Gene3D G3DSA:3.40.50.10740 1 154 2.3E-53 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal Clos_0401 833fb72f3c711fee7741c610093e19eb 309 SUPERFAMILY SSF52317 1 163 1.97E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_0874 b074ca7d63a18ab0001dd17fa6c0a3df 264 Pfam PF04199 Putative cyclase 10 167 3.1E-31 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_0874 b074ca7d63a18ab0001dd17fa6c0a3df 264 Gene3D G3DSA:3.50.30.50 5 264 3.7E-40 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_0874 b074ca7d63a18ab0001dd17fa6c0a3df 264 SUPERFAMILY SSF102198 7 260 3.66E-47 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Clos_0239 9299d82548649e44946d420f4c1caeb4 124 Gene3D G3DSA:2.60.40.730 1 124 7.0E-43 T 11-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Clos_0239 9299d82548649e44946d420f4c1caeb4 124 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 9 124 5.2E-25 T 11-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Clos_0239 9299d82548649e44946d420f4c1caeb4 124 Pfam PF01880 Desulfoferrodoxin 11 117 1.5E-31 T 11-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Clos_0239 9299d82548649e44946d420f4c1caeb4 124 SUPERFAMILY SSF49367 7 121 1.83E-35 T 11-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Clos_2098 f376133781b41c90f4ed8f27f7d7fc16 649 SUPERFAMILY SSF55931 157 543 2.26E-54 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Clos_2098 f376133781b41c90f4ed8f27f7d7fc16 649 Pfam PF00120 Glutamine synthetase, catalytic domain 180 469 9.6E-33 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Clos_2098 f376133781b41c90f4ed8f27f7d7fc16 649 SMART SM01230 157 440 9.8E-35 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Clos_2098 f376133781b41c90f4ed8f27f7d7fc16 649 Gene3D G3DSA:3.30.590.10 163 536 1.6E-48 T 11-10-2018 Clos_2725 a34efa9398055c375790ae20cfef8c39 323 Pfam PF13280 WYL domain 141 317 5.3E-29 T 11-10-2018 IPR026881 WYL domain Clos_2725 a34efa9398055c375790ae20cfef8c39 323 Gene3D G3DSA:1.10.10.10 1 62 6.2E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2725 a34efa9398055c375790ae20cfef8c39 323 SMART SM00420 5 61 0.008 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Clos_2725 a34efa9398055c375790ae20cfef8c39 323 SUPERFAMILY SSF46785 4 58 6.95E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2725 a34efa9398055c375790ae20cfef8c39 323 Pfam PF08279 HTH domain 9 59 1.3E-12 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Clos_2108 800d016d3f684a09940660359d28ded9 292 Gene3D G3DSA:3.20.20.370 48 291 9.0E-78 T 11-10-2018 Clos_2108 800d016d3f684a09940660359d28ded9 292 Pfam PF01522 Polysaccharide deacetylase 98 219 1.5E-36 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Clos_2108 800d016d3f684a09940660359d28ded9 292 SUPERFAMILY SSF88713 92 291 7.79E-68 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Clos_2650 d798012132f8ac9204e77c1a3b003adb 330 Gene3D G3DSA:1.10.260.150 50 328 2.9E-61 T 11-10-2018 Clos_2650 d798012132f8ac9204e77c1a3b003adb 330 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 78 239 4.7E-32 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Clos_2650 d798012132f8ac9204e77c1a3b003adb 330 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 79 239 8.8E-31 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Clos_0082 8be0a87c9e5b5865519c1c692b1c6539 106 SUPERFAMILY SSF46785 10 102 6.25E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0082 8be0a87c9e5b5865519c1c692b1c6539 106 Pfam PF03551 Transcriptional regulator PadR-like family 14 83 2.0E-21 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal Clos_0082 8be0a87c9e5b5865519c1c692b1c6539 106 Gene3D G3DSA:1.10.10.10 1 104 2.3E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0429 1c58f78c281051ed90ca155bd5f11952 244 SUPERFAMILY SSF53300 7 91 3.34E-9 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_0429 1c58f78c281051ed90ca155bd5f11952 244 Pfam PF00092 von Willebrand factor type A domain 7 85 3.2E-8 T 11-10-2018 IPR002035 von Willebrand factor, type A Clos_0429 1c58f78c281051ed90ca155bd5f11952 244 SUPERFAMILY SSF53300 130 227 2.97E-13 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_0429 1c58f78c281051ed90ca155bd5f11952 244 Gene3D G3DSA:3.40.50.410 1 239 3.8E-64 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Clos_0429 1c58f78c281051ed90ca155bd5f11952 244 Pfam PF13519 von Willebrand factor type A domain 135 231 2.9E-9 T 11-10-2018 IPR002035 von Willebrand factor, type A Clos_1841 30dd0542d93e177c0aa265e1268d95f4 166 Gene3D G3DSA:2.30.110.10 10 147 2.0E-24 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Clos_1841 30dd0542d93e177c0aa265e1268d95f4 166 SUPERFAMILY SSF50475 14 135 8.98E-21 T 11-10-2018 Clos_1841 30dd0542d93e177c0aa265e1268d95f4 166 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 95 3.3E-10 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Clos_0406 249c5258d21c8456b64cc705570bc097 131 ProSitePatterns PS00550 Hemerythrin family signature. 55 78 - T 11-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 Clos_0406 249c5258d21c8456b64cc705570bc097 131 Gene3D G3DSA:1.20.120.50 1 131 1.1E-30 T 11-10-2018 IPR035938 Hemerythrin-like superfamily Clos_0406 249c5258d21c8456b64cc705570bc097 131 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 128 1.7E-29 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 Clos_0406 249c5258d21c8456b64cc705570bc097 131 SUPERFAMILY SSF47188 1 128 3.14E-27 T 11-10-2018 IPR035938 Hemerythrin-like superfamily Clos_0406 249c5258d21c8456b64cc705570bc097 131 Pfam PF01814 Hemerythrin HHE cation binding domain 11 126 3.5E-10 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Clos_0717 6969c363c19f31307857cdcf1a6e9c31 268 SMART SM00954 46 169 8.5E-34 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Clos_0717 6969c363c19f31307857cdcf1a6e9c31 268 Gene3D G3DSA:1.10.287.860 152 214 4.0E-25 T 11-10-2018 Clos_0717 6969c363c19f31307857cdcf1a6e9c31 268 Pfam PF04607 Region found in RelA / SpoT proteins 46 167 3.2E-34 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Clos_0717 6969c363c19f31307857cdcf1a6e9c31 268 SUPERFAMILY SSF81301 4 202 1.06E-54 T 11-10-2018 Clos_0717 6969c363c19f31307857cdcf1a6e9c31 268 Gene3D G3DSA:3.30.460.10 2 150 1.5E-46 T 11-10-2018 Clos_1485 9ab1796643cb61b01c339587b814a2ad 485 Pfam PF02120 Flagellar hook-length control protein FliK 357 435 9.6E-20 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Clos_1485 9ab1796643cb61b01c339587b814a2ad 485 Gene3D G3DSA:3.30.750.140 332 449 1.7E-16 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Clos_1888 e74efdb907012290c077cea38c4d1b35 125 SUPERFAMILY SSF47661 9 83 5.1E-5 T 11-10-2018 IPR010989 SNARE GO:0016020|GO:0016192 Clos_0378 97ac2975cd67cc60a9d325d4b3d6d523 328 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 2 264 9.0E-67 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Clos_0378 97ac2975cd67cc60a9d325d4b3d6d523 328 Gene3D G3DSA:3.30.365.20 1 328 1.6E-99 T 11-10-2018 Clos_0378 97ac2975cd67cc60a9d325d4b3d6d523 328 SUPERFAMILY SSF56003 3 325 9.94E-92 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Clos_1992 ffdf59ca5d17c7ea5089b71cd63dc195 202 Pfam PF07007 Lysozyme inhibitor LprI 111 195 3.4E-11 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal Clos_0207 ca20f31b14557b6ee9e006dae74bd95c 186 Pfam PF13247 4Fe-4S dicluster domain 53 146 2.1E-27 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0207 ca20f31b14557b6ee9e006dae74bd95c 186 Gene3D G3DSA:3.30.70.20 65 117 2.1E-64 T 11-10-2018 Clos_0207 ca20f31b14557b6ee9e006dae74bd95c 186 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0207 ca20f31b14557b6ee9e006dae74bd95c 186 SUPERFAMILY SSF54862 3 179 8.69E-66 T 11-10-2018 Clos_0207 ca20f31b14557b6ee9e006dae74bd95c 186 Gene3D G3DSA:3.30.70.20 5 179 2.1E-64 T 11-10-2018 Clos_1424 63319ee1cbdf040cdf0a9fe7eb398711 71 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 15.101 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_1424 63319ee1cbdf040cdf0a9fe7eb398711 71 SUPERFAMILY SSF63562 1 65 7.98E-24 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Clos_1424 63319ee1cbdf040cdf0a9fe7eb398711 71 Pfam PF01192 RNA polymerase Rpb6 8 57 2.2E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Clos_1424 63319ee1cbdf040cdf0a9fe7eb398711 71 Gene3D G3DSA:3.90.940.10 1 71 2.1E-20 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Clos_1424 63319ee1cbdf040cdf0a9fe7eb398711 71 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 56 2.7E-16 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Clos_1424 63319ee1cbdf040cdf0a9fe7eb398711 71 SMART SM01409 8 61 3.4E-15 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Clos_2205 1a35546ae86481e7eb33581c8f333a77 92 Pfam PF04071 Cysteine-rich small domain 9 87 1.4E-28 T 11-10-2018 IPR007212 Cysteine-rich small domain Clos_2418 daa8706ab05876672cb9b27c715c06d6 359 Gene3D G3DSA:3.40.50.720 129 265 2.1E-18 T 11-10-2018 Clos_2418 daa8706ab05876672cb9b27c715c06d6 359 SUPERFAMILY SSF51735 134 264 5.58E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_2418 daa8706ab05876672cb9b27c715c06d6 359 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 144 257 5.1E-13 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Clos_2557 af5ab308ac8ab98d274ce4cb64db9772 175 Gene3D G3DSA:3.30.1330.30 2 126 3.8E-31 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Clos_2557 af5ab308ac8ab98d274ce4cb64db9772 175 SUPERFAMILY SSF160515 5 128 1.44E-32 T 11-10-2018 Clos_2557 af5ab308ac8ab98d274ce4cb64db9772 175 Pfam PF07997 Protein of unknown function (DUF1694) 5 118 1.1E-33 T 11-10-2018 IPR012543 Protein of unknown function DUF1694 Clos_2289 3ea79737fd3ad85dc5fa9aaa82c610de 406 Gene3D G3DSA:3.60.21.10 1 289 4.4E-75 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_2289 3ea79737fd3ad85dc5fa9aaa82c610de 406 Pfam PF00149 Calcineurin-like phosphoesterase 1 238 2.9E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Clos_2289 3ea79737fd3ad85dc5fa9aaa82c610de 406 SUPERFAMILY SSF56300 1 347 2.58E-57 T 11-10-2018 Clos_2289 3ea79737fd3ad85dc5fa9aaa82c610de 406 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 292 378 1.2E-5 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain Clos_2289 3ea79737fd3ad85dc5fa9aaa82c610de 406 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 268 2.6E-59 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 Clos_2474 38b9e20275c37e79e80b336fef12442f 204 PIRSF PIRSF037778 13 204 4.5E-46 T 11-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 Clos_2474 38b9e20275c37e79e80b336fef12442f 204 Pfam PF12822 ECF transporter, substrate-specific component 18 194 2.6E-28 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Clos_2474 38b9e20275c37e79e80b336fef12442f 204 Gene3D G3DSA:1.10.1760.20 15 204 9.7E-54 T 11-10-2018 Clos_2112 c2a6dfd1a8878a82bce314239fe81cc9 114 Pfam PF03780 Asp23 family, cell envelope-related function 7 112 2.5E-29 T 11-10-2018 IPR005531 Alkaline shock protein Asp23 Clos_0110 fb82feba1845c20822028398d390d250 187 SUPERFAMILY SSF55729 1 176 4.85E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0110 fb82feba1845c20822028398d390d250 187 Pfam PF13302 Acetyltransferase (GNAT) domain 7 150 5.9E-16 T 11-10-2018 IPR000182 GNAT domain Clos_0110 fb82feba1845c20822028398d390d250 187 Gene3D G3DSA:3.40.630.30 1 184 6.2E-34 T 11-10-2018 Clos_2208 5e4b9c1b3ee7ef735105f4c2eebf49b9 196 PIRSF PIRSF000709 2 183 3.8E-24 T 11-10-2018 Clos_2208 5e4b9c1b3ee7ef735105f4c2eebf49b9 196 Gene3D G3DSA:3.40.50.1240 1 192 7.6E-58 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Clos_2208 5e4b9c1b3ee7ef735105f4c2eebf49b9 196 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Clos_2208 5e4b9c1b3ee7ef735105f4c2eebf49b9 196 SUPERFAMILY SSF53254 1 187 1.05E-53 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Clos_2208 5e4b9c1b3ee7ef735105f4c2eebf49b9 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 184 1.4E-53 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Clos_2208 5e4b9c1b3ee7ef735105f4c2eebf49b9 196 SMART SM00855 2 154 1.3E-16 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Clos_2266 3d623217b89907d880d667b646f4c88b 312 Gene3D G3DSA:3.40.50.920 181 312 5.5E-47 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_2266 3d623217b89907d880d667b646f4c88b 312 Pfam PF02780 Transketolase, C-terminal domain 181 301 1.9E-38 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Clos_2266 3d623217b89907d880d667b646f4c88b 312 SMART SM00861 4 169 1.2E-63 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Clos_2266 3d623217b89907d880d667b646f4c88b 312 SUPERFAMILY SSF52922 176 309 7.07E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Clos_2266 3d623217b89907d880d667b646f4c88b 312 SUPERFAMILY SSF52518 3 171 1.91E-61 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Clos_2266 3d623217b89907d880d667b646f4c88b 312 Gene3D G3DSA:3.40.50.970 1 178 1.3E-68 T 11-10-2018 Clos_2266 3d623217b89907d880d667b646f4c88b 312 ProSitePatterns PS00802 Transketolase signature 2. 112 128 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Clos_2266 3d623217b89907d880d667b646f4c88b 312 Pfam PF02779 Transketolase, pyrimidine binding domain 3 168 5.0E-42 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Clos_1721 d7992b3c404cac86d8cfbfb2f1d092e8 94 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 9 85 1.1E-24 T 11-10-2018 IPR003849 Preprotein translocase YajC Clos_1721 d7992b3c404cac86d8cfbfb2f1d092e8 94 SMART SM01323 3 86 1.3E-37 T 11-10-2018 IPR003849 Preprotein translocase YajC Clos_1721 d7992b3c404cac86d8cfbfb2f1d092e8 94 Pfam PF02699 Preprotein translocase subunit 8 83 2.1E-30 T 11-10-2018 IPR003849 Preprotein translocase YajC Clos_1721 d7992b3c404cac86d8cfbfb2f1d092e8 94 PRINTS PR01853 Bacterial YajC preprotein translocase signature 43 61 1.6E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC Clos_1721 d7992b3c404cac86d8cfbfb2f1d092e8 94 PRINTS PR01853 Bacterial YajC preprotein translocase signature 5 25 1.6E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC Clos_2480 2245d25bd7f95a817ea1a0225445103d 98 Pfam PF01312 FlhB HrpN YscU SpaS Family 10 82 2.5E-18 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Clos_2480 2245d25bd7f95a817ea1a0225445103d 98 Gene3D G3DSA:3.40.1690.10 7 90 2.9E-23 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Clos_2480 2245d25bd7f95a817ea1a0225445103d 98 SUPERFAMILY SSF160544 8 86 1.11E-21 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Clos_1058 96414750b9b22367f60dde9c332324c2 758 SUPERFAMILY SSF53335 268 423 2.05E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_1058 96414750b9b22367f60dde9c332324c2 758 Gene3D G3DSA:3.40.50.150 273 502 3.3E-23 T 11-10-2018 Clos_1360 2e93f3c7347c059feccda0b8d95264b7 193 PIRSF PIRSF010130 1 192 2.6E-85 T 11-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Clos_1360 2e93f3c7347c059feccda0b8d95264b7 193 Pfam PF06130 Phosphate propanoyltransferase 116 182 1.3E-17 T 11-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Clos_1360 2e93f3c7347c059feccda0b8d95264b7 193 Pfam PF06130 Phosphate propanoyltransferase 8 87 2.4E-28 T 11-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 Clos_0751 ccea669eab0e2b718ad1eb3705e8aaca 138 Pfam PF12120 Rifampin ADP-ribosyl transferase 13 110 2.2E-46 T 11-10-2018 IPR021975 Rifampin ADP-ribosyltransferase Clos_0751 ccea669eab0e2b718ad1eb3705e8aaca 138 Gene3D G3DSA:3.20.170.40 1 138 3.7E-62 T 11-10-2018 IPR038611 Rifampin ADP-ribosyltransferase superfamily Clos_0399 127347a9c569e70c2052635e46a7f1a0 222 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 18 221 8.6E-64 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Clos_0399 127347a9c569e70c2052635e46a7f1a0 222 Pfam PF03006 Haemolysin-III related 14 214 7.4E-40 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Clos_2226 4ee2988035f82d9dfefa43d628ed6aa5 107 Gene3D G3DSA:1.10.10.10 4 102 1.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2226 4ee2988035f82d9dfefa43d628ed6aa5 107 SUPERFAMILY SSF46785 17 104 1.97E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2226 4ee2988035f82d9dfefa43d628ed6aa5 107 Pfam PF03551 Transcriptional regulator PadR-like family 21 85 1.9E-13 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal Clos_2875 8f3ff8561dc814eb6291e4046fe0648b 69 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 69 6.0E-19 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Clos_2875 8f3ff8561dc814eb6291e4046fe0648b 69 Pfam PF01809 Haemolytic domain 3 67 5.8E-30 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Clos_2875 8f3ff8561dc814eb6291e4046fe0648b 69 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 67 2.6E-27 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Clos_2875 8f3ff8561dc814eb6291e4046fe0648b 69 SMART SM01234 1 68 1.0E-41 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Clos_2875 8f3ff8561dc814eb6291e4046fe0648b 69 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.745 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Clos_0242 9fb763b3db9d7bb3e9cf1011da3b5ddf 165 Pfam PF02810 SEC-C motif 147 165 2.4E-10 T 11-10-2018 IPR004027 SEC-C motif Clos_0242 9fb763b3db9d7bb3e9cf1011da3b5ddf 165 SUPERFAMILY SSF103642 144 164 1.8E-7 T 11-10-2018 Clos_0242 9fb763b3db9d7bb3e9cf1011da3b5ddf 165 Gene3D G3DSA:3.10.450.50 106 165 1.5E-10 T 11-10-2018 Clos_0669 43e64b6b7f346faef0eb757cd69fbf29 141 SUPERFAMILY SSF81442 9 135 7.19E-5 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Clos_0669 43e64b6b7f346faef0eb757cd69fbf29 141 Pfam PF11070 Protein of unknown function (DUF2871) 1 133 1.2E-53 T 11-10-2018 IPR021299 Protein of unknown function DUF2871 Clos_2536 bdce06d19f3eb710eb1dd7ea68bd235f 144 Pfam PF07977 FabA-like domain 12 134 5.3E-38 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Clos_2536 bdce06d19f3eb710eb1dd7ea68bd235f 144 Gene3D G3DSA:3.10.129.10 1 141 2.6E-61 T 11-10-2018 Clos_2536 bdce06d19f3eb710eb1dd7ea68bd235f 144 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 6 139 2.6E-59 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Clos_2536 bdce06d19f3eb710eb1dd7ea68bd235f 144 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 142 34.276 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Clos_2536 bdce06d19f3eb710eb1dd7ea68bd235f 144 SUPERFAMILY SSF54637 3 139 7.32E-50 T 11-10-2018 IPR029069 HotDog domain superfamily Clos_0976 c01fa8278c2bbe7bb2fb36b996513941 100 PIRSF PIRSF002599 3 96 2.2E-9 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Clos_0976 c01fa8278c2bbe7bb2fb36b996513941 100 Pfam PF06961 Protein of unknown function (DUF1294) 24 78 5.2E-23 T 11-10-2018 IPR010718 Protein of unknown function DUF1294 Clos_2236 4dfbfb274826b3004c5a791f422b6ed5 239 SUPERFAMILY SSF52540 69 223 4.44E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2236 4dfbfb274826b3004c5a791f422b6ed5 239 PIRSF PIRSF003073 1 239 3.8E-67 T 11-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Clos_2236 4dfbfb274826b3004c5a791f422b6ed5 239 SMART SM00382 92 224 2.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_2236 4dfbfb274826b3004c5a791f422b6ed5 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 93 113 3.4E-5 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_2236 4dfbfb274826b3004c5a791f422b6ed5 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 123 137 3.4E-5 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_2236 4dfbfb274826b3004c5a791f422b6ed5 239 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 155 169 3.4E-5 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Clos_2236 4dfbfb274826b3004c5a791f422b6ed5 239 Gene3D G3DSA:3.40.50.300 55 237 2.2E-47 T 11-10-2018 Clos_2236 4dfbfb274826b3004c5a791f422b6ed5 239 Pfam PF01695 IstB-like ATP binding protein 51 223 4.4E-58 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Clos_1347 a2f1fb0be69d3d12969b336d9b0632e9 515 Gene3D G3DSA:3.90.76.10 49 195 1.2E-153 T 11-10-2018 Clos_1347 a2f1fb0be69d3d12969b336d9b0632e9 515 Gene3D G3DSA:3.10.105.10 270 489 1.2E-153 T 11-10-2018 Clos_1347 a2f1fb0be69d3d12969b336d9b0632e9 515 PIRSF PIRSF002741 1 515 4.2E-139 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Clos_1347 a2f1fb0be69d3d12969b336d9b0632e9 515 Gene3D G3DSA:3.40.190.10 196 499 1.2E-153 T 11-10-2018 Clos_1347 a2f1fb0be69d3d12969b336d9b0632e9 515 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 434 4.4E-101 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain Clos_1347 a2f1fb0be69d3d12969b336d9b0632e9 515 SUPERFAMILY SSF53850 39 514 2.77E-149 T 11-10-2018 Clos_0789 4a9a0d1573c50ebd5bc22926ced08e1f 374 Pfam PF00578 AhpC/TSA family 225 341 1.9E-11 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Clos_0789 4a9a0d1573c50ebd5bc22926ced08e1f 374 SUPERFAMILY SSF52833 230 364 3.32E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0789 4a9a0d1573c50ebd5bc22926ced08e1f 374 Gene3D G3DSA:3.40.30.10 221 369 6.8E-25 T 11-10-2018 Clos_0284 31404f5c0afd4c9df62c4fc900b6253f 524 SMART SM00257 473 517 1.4E-6 T 11-10-2018 IPR018392 LysM domain Clos_0284 31404f5c0afd4c9df62c4fc900b6253f 524 Gene3D G3DSA:3.10.350.10 472 518 6.0E-13 T 11-10-2018 IPR036779 LysM domain superfamily Clos_0284 31404f5c0afd4c9df62c4fc900b6253f 524 Pfam PF12673 Domain of unknown function (DUF3794) 37 118 2.9E-17 T 11-10-2018 IPR024300 Domain of unknown function DUF3794 Clos_0284 31404f5c0afd4c9df62c4fc900b6253f 524 Pfam PF12673 Domain of unknown function (DUF3794) 189 269 9.0E-13 T 11-10-2018 IPR024300 Domain of unknown function DUF3794 Clos_0284 31404f5c0afd4c9df62c4fc900b6253f 524 Pfam PF12673 Domain of unknown function (DUF3794) 346 427 1.0E-13 T 11-10-2018 IPR024300 Domain of unknown function DUF3794 Clos_0284 31404f5c0afd4c9df62c4fc900b6253f 524 SUPERFAMILY SSF54106 472 516 6.15E-9 T 11-10-2018 Clos_0284 31404f5c0afd4c9df62c4fc900b6253f 524 Pfam PF01476 LysM domain 477 516 2.4E-9 T 11-10-2018 IPR018392 LysM domain Clos_2104 2f8c3216a7f920554346214a31b003e5 349 SUPERFAMILY SSF143631 34 338 1.62E-93 T 11-10-2018 IPR003374 ApbE-like superfamily Clos_2104 2f8c3216a7f920554346214a31b003e5 349 Pfam PF02424 ApbE family 41 320 1.4E-80 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Clos_2104 2f8c3216a7f920554346214a31b003e5 349 PIRSF PIRSF006268 1 343 1.4E-102 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Clos_2104 2f8c3216a7f920554346214a31b003e5 349 Gene3D G3DSA:3.10.520.20 26 349 4.1E-109 T 11-10-2018 Clos_2664 dba505ad573d9645f85e7ea185ef7ec0 177 Pfam PF07670 Nucleoside recognition 47 147 1.4E-8 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_1158 bd8dc4aad5f94db84eccd6f78f1b444e 202 SUPERFAMILY SSF50486 2 201 1.33E-70 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Clos_1158 bd8dc4aad5f94db84eccd6f78f1b444e 202 Gene3D G3DSA:3.10.300.10 1 202 7.6E-78 T 11-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Clos_1158 bd8dc4aad5f94db84eccd6f78f1b444e 202 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 3 200 6.4E-66 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Clos_1158 bd8dc4aad5f94db84eccd6f78f1b444e 202 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 6 197 2.4E-68 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Clos_1158 bd8dc4aad5f94db84eccd6f78f1b444e 202 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 5 200 34.541 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Clos_2539 0ea5c90a5bfbb1f5939d85b11c637906 272 Gene3D G3DSA:1.10.3720.10 3 268 5.7E-57 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2539 0ea5c90a5bfbb1f5939d85b11c637906 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 258 4.8E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2539 0ea5c90a5bfbb1f5939d85b11c637906 272 SUPERFAMILY SSF161098 5 264 3.46E-56 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0388 039af959511c53e231975cf7af1d9141 231 SMART SM00448 4 115 5.0E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0388 039af959511c53e231975cf7af1d9141 231 SUPERFAMILY SSF52172 3 191 1.01E-36 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0388 039af959511c53e231975cf7af1d9141 231 Gene3D G3DSA:1.10.10.10 141 231 2.0E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0388 039af959511c53e231975cf7af1d9141 231 SMART SM00862 154 229 1.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0388 039af959511c53e231975cf7af1d9141 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 229 4.2E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Clos_0388 039af959511c53e231975cf7af1d9141 231 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0388 039af959511c53e231975cf7af1d9141 231 Gene3D G3DSA:3.40.50.12740 3 140 2.7E-34 T 11-10-2018 Clos_0191 82d26abac216bb46f91034d5d8e28080 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 104 4.2E-24 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Clos_0191 82d26abac216bb46f91034d5d8e28080 111 PIRSF PIRSF003203 1 110 5.6E-33 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Clos_0775 8b43cca28dbfbc9ef087a7ed32a62824 417 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 18 285 3.9E-64 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 Clos_0775 8b43cca28dbfbc9ef087a7ed32a62824 417 Pfam PF03851 UV-endonuclease UvdE 20 264 2.7E-70 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 Clos_0775 8b43cca28dbfbc9ef087a7ed32a62824 417 Gene3D G3DSA:3.20.20.150 1 294 1.1E-93 T 11-10-2018 Clos_0775 8b43cca28dbfbc9ef087a7ed32a62824 417 Pfam PF08349 Protein of unknown function (DUF1722) 307 415 2.6E-21 T 11-10-2018 IPR013560 Domain of unknown function DUF1722 Clos_2408 ad3fe2d44e104ecdc1a08d37bda73703 180 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 6 178 9.1E-28 T 11-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 Clos_2408 ad3fe2d44e104ecdc1a08d37bda73703 180 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 175 2.6E-33 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Clos_2408 ad3fe2d44e104ecdc1a08d37bda73703 180 SUPERFAMILY SSF53323 5 178 8.76E-43 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_2408 ad3fe2d44e104ecdc1a08d37bda73703 180 Gene3D G3DSA:3.40.920.10 3 180 6.6E-51 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_1871 4f8d0cc00fd6673d4067a62687840414 183 Gene3D G3DSA:2.130.10.10 53 179 1.4E-5 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Clos_1871 4f8d0cc00fd6673d4067a62687840414 183 SUPERFAMILY SSF50998 67 175 2.49E-6 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Clos_0981 ec3d383a04611e5fe1645aa2d69d01ce 679 PIRSF PIRSF018968 1 667 3.1E-41 T 11-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 Clos_0981 ec3d383a04611e5fe1645aa2d69d01ce 679 Pfam PF02687 FtsX-like permease family 89 185 2.0E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_2364 ec111791c9974adaa902dc00a71aa8bc 347 Pfam PF05140 ResB-like family 15 97 1.6E-18 T 11-10-2018 IPR007816 ResB-like domain Clos_2364 ec111791c9974adaa902dc00a71aa8bc 347 Pfam PF05140 ResB-like family 95 272 1.5E-17 T 11-10-2018 IPR007816 ResB-like domain Clos_1132 85bff19afc8101dbbae55a96975856cd 346 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 57 323 4.9E-62 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Clos_1132 85bff19afc8101dbbae55a96975856cd 346 Gene3D G3DSA:3.40.190.170 40 346 2.8E-85 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Clos_0005 fed2c2b1a2bb86bab8c826cd90258ac7 111 Pfam PF04025 Domain of unknown function (DUF370) 2 89 5.0E-12 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A Clos_1496 fc65c9ffbc71ea0dade6660be851ee24 114 Pfam PF04347 Flagellar biosynthesis protein, FliO 29 82 1.7E-5 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Clos_2227 f1ee42adeb50947eb88c25e752dfb3d5 531 Pfam PF12849 PBP superfamily domain 254 514 2.0E-25 T 11-10-2018 IPR024370 PBP domain Clos_2227 f1ee42adeb50947eb88c25e752dfb3d5 531 SUPERFAMILY SSF53850 253 526 1.46E-51 T 11-10-2018 Clos_2227 f1ee42adeb50947eb88c25e752dfb3d5 531 Gene3D G3DSA:3.40.190.10 253 525 2.7E-55 T 11-10-2018 Clos_2227 f1ee42adeb50947eb88c25e752dfb3d5 531 Gene3D G3DSA:3.40.190.10 352 489 2.7E-55 T 11-10-2018 Clos_1136 af47cc0e049e24113070cbcbb5e6239b 189 SUPERFAMILY SSF110391 13 187 3.14E-60 T 11-10-2018 IPR035928 GlpP-like superfamily Clos_1136 af47cc0e049e24113070cbcbb5e6239b 189 PIRSF PIRSF016897 3 189 7.9E-73 T 11-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 Clos_1136 af47cc0e049e24113070cbcbb5e6239b 189 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 14 186 1.9E-66 T 11-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 Clos_1136 af47cc0e049e24113070cbcbb5e6239b 189 Gene3D G3DSA:3.20.20.400 5 189 1.4E-68 T 11-10-2018 IPR035928 GlpP-like superfamily Clos_1719 76abc9da94aec59395245ddee1aad393 46 Pfam PF13165 Six-cysteine peptide SCIFF 2 45 3.6E-23 T 11-10-2018 IPR023975 Six-cysteine peptide SCIFF Clos_1719 76abc9da94aec59395245ddee1aad393 46 TIGRFAM TIGR03973 six_Cys_in_45: six-cysteine peptide SCIFF 2 44 9.0E-24 T 11-10-2018 IPR023975 Six-cysteine peptide SCIFF Clos_2399 2953450cf0d0d520a53938221e3296f1 496 Pfam PF00171 Aldehyde dehydrogenase family 12 274 1.4E-23 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Clos_2399 2953450cf0d0d520a53938221e3296f1 496 Gene3D G3DSA:3.40.605.10 15 445 5.3E-164 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Clos_2399 2953450cf0d0d520a53938221e3296f1 496 SUPERFAMILY SSF53720 11 451 1.26E-70 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Clos_2399 2953450cf0d0d520a53938221e3296f1 496 Gene3D G3DSA:3.40.309.10 223 407 5.3E-164 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Clos_1042 9ffc1bf90a27c36eff1bbaf6762aac10 139 Pfam PF04024 PspC domain 3 60 4.1E-23 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Clos_0795 f3a34c79f1460d361d66fa907bf844bc 114 PIRSF PIRSF012296 1 114 3.7E-48 T 11-10-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 Clos_0795 f3a34c79f1460d361d66fa907bf844bc 114 SUPERFAMILY SSF143414 42 109 1.83E-14 T 11-10-2018 IPR037233 CcmK-like superfamily Clos_0795 f3a34c79f1460d361d66fa907bf844bc 114 Pfam PF00936 BMC domain 43 110 4.4E-13 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0795 f3a34c79f1460d361d66fa907bf844bc 114 SMART SM00877 42 112 3.2E-13 T 11-10-2018 IPR000249 Microcompartment protein, bacteria Clos_0795 f3a34c79f1460d361d66fa907bf844bc 114 Gene3D G3DSA:3.30.70.1710 1 114 1.4E-44 T 11-10-2018 Clos_1907 2daafdb1bbf2b5a333637d71c0156283 450 Pfam PF00437 Type II/IV secretion system protein 94 364 9.9E-26 T 11-10-2018 IPR001482 Type II/IV secretion system protein Clos_1907 2daafdb1bbf2b5a333637d71c0156283 450 Gene3D G3DSA:3.30.450.380 7 187 4.2E-7 T 11-10-2018 Clos_1907 2daafdb1bbf2b5a333637d71c0156283 450 SUPERFAMILY SSF52540 80 365 3.16E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1907 2daafdb1bbf2b5a333637d71c0156283 450 Gene3D G3DSA:3.40.50.300 188 391 5.8E-34 T 11-10-2018 Clos_1382 3775c08efb6b9f88ef55ec7ddb51281e 243 Pfam PF05949 Bacterial protein of unknown function (DUF881) 90 237 5.6E-40 T 11-10-2018 IPR010273 Protein of unknown function DUF881 Clos_1382 3775c08efb6b9f88ef55ec7ddb51281e 243 Gene3D G3DSA:3.30.70.1880 88 243 1.1E-42 T 11-10-2018 Clos_1800 630ae2f6f5048036373382a4148a6af8 302 Pfam PF01636 Phosphotransferase enzyme family 17 238 6.4E-28 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Clos_1800 630ae2f6f5048036373382a4148a6af8 302 SUPERFAMILY SSF56112 13 253 1.58E-32 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Clos_1800 630ae2f6f5048036373382a4148a6af8 302 Gene3D G3DSA:3.90.1200.10 97 289 3.5E-25 T 11-10-2018 Clos_0195 674aa29827460160376354d23cfbcce7 335 Gene3D G3DSA:1.10.3470.10 1 334 2.9E-100 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0195 674aa29827460160376354d23cfbcce7 335 SUPERFAMILY SSF81345 4 328 1.57E-76 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Clos_0195 674aa29827460160376354d23cfbcce7 335 Pfam PF01032 FecCD transport family 15 328 7.3E-87 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Clos_0018 f94f0b2c29f333f05cd648e8bef8d305 154 SUPERFAMILY SSF53927 5 149 1.41E-56 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Clos_0018 f94f0b2c29f333f05cd648e8bef8d305 154 Gene3D G3DSA:3.40.140.10 2 153 3.9E-66 T 11-10-2018 Clos_0018 f94f0b2c29f333f05cd648e8bef8d305 154 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 149 48.515 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Clos_0018 f94f0b2c29f333f05cd648e8bef8d305 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Clos_0018 f94f0b2c29f333f05cd648e8bef8d305 154 Pfam PF14437 MafB19-like deaminase 5 149 1.1E-45 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Clos_0021 09d3a857623a7d569bd41e0832bd9822 120 Pfam PF09862 Protein of unknown function (DUF2089) 9 119 1.1E-45 T 11-10-2018 IPR018658 Protein of unknown function DUF2089 Clos_0217 ea5d5df6978fac5d7b1066c0882d9cdd 273 SUPERFAMILY SSF102114 24 250 1.44E-33 T 11-10-2018 Clos_0217 ea5d5df6978fac5d7b1066c0882d9cdd 273 SMART SM00729 28 236 5.7E-19 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Clos_0217 ea5d5df6978fac5d7b1066c0882d9cdd 273 Gene3D G3DSA:3.20.20.70 1 265 7.6E-43 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_0217 ea5d5df6978fac5d7b1066c0882d9cdd 273 Pfam PF04055 Radical SAM superfamily 44 192 2.6E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_0555 1df6609c0d7bb0d6837fb3b2293915e0 172 Gene3D G3DSA:3.30.70.120 87 157 3.8E-5 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clos_0555 1df6609c0d7bb0d6837fb3b2293915e0 172 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 112 164 7.2E-12 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 Clos_0555 1df6609c0d7bb0d6837fb3b2293915e0 172 Hamap MF_01515 UPF0316 protein . 4 172 29.079 T 11-10-2018 IPR022930 Protein of unknown function UPF0316 Clos_1908 b9f5b42277d51cc4868338f3ec355152 420 Pfam PF13614 AAA domain 170 326 1.3E-10 T 11-10-2018 IPR025669 AAA domain Clos_1908 b9f5b42277d51cc4868338f3ec355152 420 SUPERFAMILY SSF52540 164 376 2.22E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1908 b9f5b42277d51cc4868338f3ec355152 420 Gene3D G3DSA:3.40.50.300 153 384 3.2E-26 T 11-10-2018 Clos_2434 8ca8a7fb3973554a141403a2e0c6a25c 298 Gene3D G3DSA:3.40.190.10 130 244 1.4E-88 T 11-10-2018 Clos_2434 8ca8a7fb3973554a141403a2e0c6a25c 298 Pfam PF12849 PBP superfamily domain 45 275 6.3E-37 T 11-10-2018 IPR024370 PBP domain Clos_2434 8ca8a7fb3973554a141403a2e0c6a25c 298 Gene3D G3DSA:3.40.190.10 55 281 1.4E-88 T 11-10-2018 Clos_2434 8ca8a7fb3973554a141403a2e0c6a25c 298 SUPERFAMILY SSF53850 53 284 6.8E-34 T 11-10-2018 Clos_1241 ea331b9db60ead22539e24d41e5c5cf7 430 Gene3D G3DSA:2.40.50.140 368 430 2.6E-8 T 11-10-2018 Clos_1241 ea331b9db60ead22539e24d41e5c5cf7 430 Gene3D G3DSA:3.90.226.10 25 229 2.7E-38 T 11-10-2018 Clos_1241 ea331b9db60ead22539e24d41e5c5cf7 430 SUPERFAMILY SSF52096 12 191 6.05E-22 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_1241 ea331b9db60ead22539e24d41e5c5cf7 430 Pfam PF01957 NfeD-like C-terminal, partner-binding 282 428 4.4E-15 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain Clos_1241 ea331b9db60ead22539e24d41e5c5cf7 430 SUPERFAMILY SSF141322 368 429 1.57E-6 T 11-10-2018 Clos_0404 81fe98671c42eddf6934a4e7153c16c3 159 Pfam PF13686 DsrE/DsrF/DrsH-like family 3 158 8.9E-59 T 11-10-2018 IPR032836 DsrE2-like family Clos_0404 81fe98671c42eddf6934a4e7153c16c3 159 Gene3D G3DSA:3.40.1260.10 1 159 5.1E-60 T 11-10-2018 IPR027396 DsrEFH-like Clos_0404 81fe98671c42eddf6934a4e7153c16c3 159 SUPERFAMILY SSF75169 4 155 5.76E-18 T 11-10-2018 IPR027396 DsrEFH-like Clos_0040 dfafc9df88a4ac70bff73008a1b8fdc8 295 Pfam PF14501 GHKL domain 191 294 6.6E-25 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Clos_0040 dfafc9df88a4ac70bff73008a1b8fdc8 295 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 99 150 1.3E-7 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain Clos_0040 dfafc9df88a4ac70bff73008a1b8fdc8 295 SUPERFAMILY SSF55874 162 294 6.55E-11 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0040 dfafc9df88a4ac70bff73008a1b8fdc8 295 Gene3D G3DSA:3.30.565.10 148 293 5.1E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Clos_0040 dfafc9df88a4ac70bff73008a1b8fdc8 295 SUPERFAMILY SSF55890 103 157 1.07E-9 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Clos_0988 bd566d9540eebc27756e7adf46eb013e 158 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 10 154 1.6E-48 T 11-10-2018 Clos_0988 bd566d9540eebc27756e7adf46eb013e 158 Gene3D G3DSA:3.40.30.10 72 158 4.1E-26 T 11-10-2018 Clos_0988 bd566d9540eebc27756e7adf46eb013e 158 PIRSF PIRSF000216 2 158 1.7E-47 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0988 bd566d9540eebc27756e7adf46eb013e 158 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 112 130 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Clos_0988 bd566d9540eebc27756e7adf46eb013e 158 SUPERFAMILY SSF52833 5 156 1.57E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Clos_0988 bd566d9540eebc27756e7adf46eb013e 158 Gene3D G3DSA:1.10.10.1590 2 71 8.7E-14 T 11-10-2018 Clos_2635 f253713faf99efc4e8c9239b74edeae9 329 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 67 325 3.2E-64 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Clos_2635 f253713faf99efc4e8c9239b74edeae9 329 Pfam PF08486 Stage II sporulation protein 66 154 1.2E-19 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Clos_0674 127b522071798b46232c038790cf9dfa 482 Pfam PF02386 Cation transport protein 39 474 5.7E-61 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Clos_0674 127b522071798b46232c038790cf9dfa 482 PIRSF PIRSF006247 1 480 7.0E-164 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Clos_1100 563cc429bac49c49ff95b2a8dd0ecfca 143 Pfam PF03473 MOSC domain 36 140 1.4E-5 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Clos_1100 563cc429bac49c49ff95b2a8dd0ecfca 143 Gene3D G3DSA:2.40.33.20 2 143 3.5E-34 T 11-10-2018 Clos_1100 563cc429bac49c49ff95b2a8dd0ecfca 143 SUPERFAMILY SSF50800 2 142 8.37E-38 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Clos_1620 c066ee74b107bd42236617f849c5c554 67 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 63 9.2E-19 T 11-10-2018 IPR025664 Stage III sporulation protein AC/AD family Clos_1620 c066ee74b107bd42236617f849c5c554 67 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 1.9E-27 T 11-10-2018 IPR009570 Stage III sporulation protein AC Clos_0016 410bb6e5a5006e2609879b10d8d6c22e 476 Gene3D G3DSA:3.90.226.10 196 292 8.6E-10 T 11-10-2018 Clos_0016 410bb6e5a5006e2609879b10d8d6c22e 476 SUPERFAMILY SSF52096 179 469 3.98E-30 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_0016 410bb6e5a5006e2609879b10d8d6c22e 476 Pfam PF03572 Peptidase family S41 215 452 7.6E-20 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Clos_0016 410bb6e5a5006e2609879b10d8d6c22e 476 Gene3D G3DSA:3.90.226.10 322 446 2.1E-9 T 11-10-2018 Clos_1845 5445263dc180f8392f5b86e362f00a48 529 Pfam PF00239 Resolvase, N terminal domain 3 147 3.7E-21 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Clos_1845 5445263dc180f8392f5b86e362f00a48 529 Gene3D G3DSA:3.40.50.1390 1 128 1.3E-24 T 11-10-2018 Clos_1845 5445263dc180f8392f5b86e362f00a48 529 Pfam PF13408 Recombinase zinc beta ribbon domain 307 364 2.1E-10 T 11-10-2018 IPR025827 Recombinase zinc beta ribbon domain Clos_1845 5445263dc180f8392f5b86e362f00a48 529 Pfam PF07508 Recombinase 173 293 1.8E-21 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Clos_1845 5445263dc180f8392f5b86e362f00a48 529 SMART SM00857 3 151 6.5E-32 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Clos_1845 5445263dc180f8392f5b86e362f00a48 529 Gene3D G3DSA:1.10.10.2600 129 294 6.9E-17 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily Clos_1845 5445263dc180f8392f5b86e362f00a48 529 SUPERFAMILY SSF53041 1 146 4.19E-27 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Clos_1092 01cae33861e83e92650ba0e866b18eb5 323 Pfam PF00005 ABC transporter 27 169 2.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_1092 01cae33861e83e92650ba0e866b18eb5 323 Gene3D G3DSA:3.40.50.300 2 239 2.2E-68 T 11-10-2018 Clos_1092 01cae33861e83e92650ba0e866b18eb5 323 SUPERFAMILY SSF52540 4 229 9.63E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1092 01cae33861e83e92650ba0e866b18eb5 323 SMART SM00382 35 217 1.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1092 01cae33861e83e92650ba0e866b18eb5 323 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_1362 56ed33c3f9489e75e9f3a9453b1b62c2 614 Pfam PF09972 Predicted membrane protein (DUF2207) 53 539 7.9E-81 T 11-10-2018 IPR018702 Protein of unknown function DUF2207, membrane Clos_0559 612cce97b18010c65126d15f6fcd34f6 154 SUPERFAMILY SSF56300 2 146 1.99E-36 T 11-10-2018 Clos_0559 612cce97b18010c65126d15f6fcd34f6 154 Gene3D G3DSA:3.60.21.10 1 154 3.1E-39 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_0559 612cce97b18010c65126d15f6fcd34f6 154 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 145 4.7E-29 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Clos_0559 612cce97b18010c65126d15f6fcd34f6 154 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 145 2.2E-27 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Clos_0075 5541e73b014bf3f4fa7867fc08a997db 238 Gene3D G3DSA:3.40.50.150 10 220 4.3E-45 T 11-10-2018 Clos_0075 5541e73b014bf3f4fa7867fc08a997db 238 Pfam PF13649 Methyltransferase domain 37 129 2.7E-15 T 11-10-2018 Clos_0075 5541e73b014bf3f4fa7867fc08a997db 238 Gene3D G3DSA:2.20.25.110 137 195 4.3E-45 T 11-10-2018 Clos_0075 5541e73b014bf3f4fa7867fc08a997db 238 SUPERFAMILY SSF53335 3 238 9.26E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0279 8d2304fdf67e395f2de2ffc8008b8483 57 SUPERFAMILY SSF89360 4 48 1.77E-5 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Clos_1693 77ab746911681b06bd3e41f246f63b2a 354 SUPERFAMILY SSF51419 7 227 7.06E-24 T 11-10-2018 IPR029066 PLP-binding barrel Clos_1693 77ab746911681b06bd3e41f246f63b2a 354 Pfam PF01168 Alanine racemase, N-terminal domain 7 222 2.3E-18 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Clos_1693 77ab746911681b06bd3e41f246f63b2a 354 Gene3D G3DSA:3.20.20.10 9 220 3.0E-25 T 11-10-2018 IPR029066 PLP-binding barrel Clos_1294 eb6e682bf7ceee2cf4248b3f651b118a 891 Pfam PF01807 CHC2 zinc finger 14 96 1.1E-17 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Clos_1294 eb6e682bf7ceee2cf4248b3f651b118a 891 SUPERFAMILY SSF56731 149 250 1.96E-5 T 11-10-2018 Clos_1294 eb6e682bf7ceee2cf4248b3f651b118a 891 Pfam PF06048 Domain of unknown function (DUF927) 366 641 1.8E-73 T 11-10-2018 IPR009270 Domain of unknown function DUF927 Clos_1294 eb6e682bf7ceee2cf4248b3f651b118a 891 SUPERFAMILY SSF57783 20 97 1.48E-18 T 11-10-2018 Clos_1294 eb6e682bf7ceee2cf4248b3f651b118a 891 Gene3D G3DSA:3.90.580.10 7 101 2.6E-21 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Clos_1294 eb6e682bf7ceee2cf4248b3f651b118a 891 Gene3D G3DSA:3.40.1360.10 204 332 7.4E-8 T 11-10-2018 Clos_1294 eb6e682bf7ceee2cf4248b3f651b118a 891 SMART SM00400 36 90 2.7E-17 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Clos_0282 8d99f0021f565beb1bc0841d47b69e68 95 Pfam PF06257 Biofilm formation stimulator VEG 11 83 1.5E-30 T 11-10-2018 IPR009366 Protein Veg GO:0006355 Clos_0282 8d99f0021f565beb1bc0841d47b69e68 95 PIRSF PIRSF037257 7 94 1.0E-32 T 11-10-2018 IPR009366 Protein Veg GO:0006355 Clos_0282 8d99f0021f565beb1bc0841d47b69e68 95 Gene3D G3DSA:2.30.30.100 3 87 2.1E-28 T 11-10-2018 Clos_0302 43604dc7057cbd1d37d61a1cfa2e48f4 383 Pfam PF13379 NMT1-like family 98 317 7.0E-33 T 11-10-2018 Clos_0302 43604dc7057cbd1d37d61a1cfa2e48f4 383 SUPERFAMILY SSF53850 99 310 1.34E-20 T 11-10-2018 Clos_0302 43604dc7057cbd1d37d61a1cfa2e48f4 383 Gene3D G3DSA:3.40.190.10 177 381 6.7E-24 T 11-10-2018 Clos_2089 f91f924d7bf714cb2a4f7e5345f87f03 301 Pfam PF05099 Tellurite resistance protein TerB 21 130 5.7E-7 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Clos_2089 f91f924d7bf714cb2a4f7e5345f87f03 301 Gene3D G3DSA:1.10.3680.10 5 144 3.4E-8 T 11-10-2018 IPR029024 TerB-like Clos_2089 f91f924d7bf714cb2a4f7e5345f87f03 301 SUPERFAMILY SSF158682 14 134 2.09E-9 T 11-10-2018 IPR029024 TerB-like Clos_2301 77ae945a3a6ad2d9e95ea087753791ca 238 Gene3D G3DSA:1.20.5.170 109 155 1.0E-13 T 11-10-2018 Clos_2301 77ae945a3a6ad2d9e95ea087753791ca 238 Gene3D G3DSA:1.20.5.170 62 108 1.4E-13 T 11-10-2018 Clos_2301 77ae945a3a6ad2d9e95ea087753791ca 238 Gene3D G3DSA:1.20.5.170 21 61 3.6E-7 T 11-10-2018 Clos_2256 49b95bb3fecb6dc62fcc1acd129d248f 216 Gene3D G3DSA:2.40.10.220 95 206 1.3E-13 T 11-10-2018 Clos_2256 49b95bb3fecb6dc62fcc1acd129d248f 216 SUPERFAMILY SSF141371 93 196 8.63E-6 T 11-10-2018 Clos_2256 49b95bb3fecb6dc62fcc1acd129d248f 216 Pfam PF07238 PilZ domain 94 202 1.5E-12 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Clos_0790 67186b48179008a193f8501e2caaa52c 287 Pfam PF12801 4Fe-4S binding domain 136 169 0.043 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0790 67186b48179008a193f8501e2caaa52c 287 Pfam PF12801 4Fe-4S binding domain 76 117 1.6E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0790 67186b48179008a193f8501e2caaa52c 287 Pfam PF12801 4Fe-4S binding domain 59 69 140.0 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0790 67186b48179008a193f8501e2caaa52c 287 Pfam PF12801 4Fe-4S binding domain 192 224 3.3E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0790 67186b48179008a193f8501e2caaa52c 287 Pfam PF00037 4Fe-4S binding domain 258 278 1.3E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0790 67186b48179008a193f8501e2caaa52c 287 Gene3D G3DSA:3.30.70.20 207 256 3.1E-9 T 11-10-2018 Clos_0790 67186b48179008a193f8501e2caaa52c 287 SUPERFAMILY SSF54862 83 280 3.0E-21 T 11-10-2018 Clos_2713 8e239e14e8e4dd75cb1d1592daee31c2 345 Pfam PF03358 NADPH-dependent FMN reductase 161 314 1.1E-18 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Clos_2713 8e239e14e8e4dd75cb1d1592daee31c2 345 SUPERFAMILY SSF52218 159 343 6.17E-19 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_2713 8e239e14e8e4dd75cb1d1592daee31c2 345 Gene3D G3DSA:3.40.50.360 161 344 1.2E-22 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_2085 600bfa2b16c2657e7d5d7bdcde482ba3 256 Pfam PF07136 Protein of unknown function (DUF1385) 74 236 3.3E-19 T 11-10-2018 IPR010787 Protein of unknown function DUF1385 Clos_2085 600bfa2b16c2657e7d5d7bdcde482ba3 256 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 119 230 1.0E-27 T 11-10-2018 IPR010787 Protein of unknown function DUF1385 Clos_0601 06a22e04c006551933469dad9d5e717f 195 Gene3D G3DSA:3.40.50.300 1 182 2.1E-54 T 11-10-2018 Clos_0601 06a22e04c006551933469dad9d5e717f 195 Pfam PF13238 AAA domain 3 122 1.1E-9 T 11-10-2018 Clos_0601 06a22e04c006551933469dad9d5e717f 195 SUPERFAMILY SSF52540 1 167 1.23E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0379 0e8491de7651b841128db1be4e229c27 572 Pfam PF13382 Adenine deaminase C-terminal domain 397 566 8.0E-64 T 11-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Clos_0379 0e8491de7651b841128db1be4e229c27 572 SUPERFAMILY SSF51556 69 315 6.57E-39 T 11-10-2018 IPR032466 Metal-dependent hydrolase Clos_0379 0e8491de7651b841128db1be4e229c27 572 TIGRFAM TIGR01178 ade: adenine deaminase 20 570 6.9E-201 T 11-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Clos_0379 0e8491de7651b841128db1be4e229c27 572 Gene3D G3DSA:3.20.20.140 69 310 1.6E-137 T 11-10-2018 Clos_0379 0e8491de7651b841128db1be4e229c27 572 Pfam PF01979 Amidohydrolase family 65 346 1.4E-35 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Clos_0379 0e8491de7651b841128db1be4e229c27 572 Gene3D G3DSA:2.30.40.10 11 347 1.6E-137 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0379 0e8491de7651b841128db1be4e229c27 572 SUPERFAMILY SSF51338 18 347 6.32E-20 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Clos_0379 0e8491de7651b841128db1be4e229c27 572 Hamap MF_01518 Adenine deaminase [ade]. 19 569 40.024 T 11-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Clos_1271 0071e58d310bfaee7f15d64309d34f89 399 PIRSF PIRSF004810 1 399 1.7E-69 T 11-10-2018 IPR014047 Chromate transporter, long chain Clos_1271 0071e58d310bfaee7f15d64309d34f89 399 Pfam PF02417 Chromate transporter 227 396 5.9E-33 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Clos_1271 0071e58d310bfaee7f15d64309d34f89 399 Pfam PF02417 Chromate transporter 22 181 7.5E-22 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Clos_1271 0071e58d310bfaee7f15d64309d34f89 399 TIGRFAM TIGR00937 2A51: chromate efflux transporter 28 396 1.3E-60 T 11-10-2018 IPR014047 Chromate transporter, long chain Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 1.3E-66 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 PIRSF PIRSF002133 1 137 1.3E-50 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 SUPERFAMILY SSF50249 3 136 3.6E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 Pfam PF00164 Ribosomal protein S12/S23 38 136 1.6E-39 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 PRINTS PR01034 Ribosomal protein S12 signature 123 135 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 PRINTS PR01034 Ribosomal protein S12 signature 40 55 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 PRINTS PR01034 Ribosomal protein S12 signature 71 90 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 PRINTS PR01034 Ribosomal protein S12 signature 55 70 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 PRINTS PR01034 Ribosomal protein S12 signature 107 123 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 PRINTS PR01034 Ribosomal protein S12 signature 90 107 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 Gene3D G3DSA:2.40.50.140 1 140 2.3E-61 T 11-10-2018 Clos_0487 b8fa3c1368ea4edd729f03575613611d 140 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.627 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0792 0bddb91a72d7e969205a5006c252a97d 147 SUPERFAMILY SSF52540 2 141 4.3E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0792 0bddb91a72d7e969205a5006c252a97d 147 PIRSF PIRSF036409 1 146 3.3E-53 T 11-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Clos_0792 0bddb91a72d7e969205a5006c252a97d 147 Gene3D G3DSA:3.40.50.300 1 146 2.1E-16 T 11-10-2018 Clos_0792 0bddb91a72d7e969205a5006c252a97d 147 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 142 8.6E-52 T 11-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Clos_0792 0bddb91a72d7e969205a5006c252a97d 147 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 142 3.4E-60 T 11-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Clos_1798 2328b412cd11a2095f6258921f275367 188 SUPERFAMILY SSF52499 1 159 1.31E-36 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Clos_1798 2328b412cd11a2095f6258921f275367 188 Pfam PF00857 Isochorismatase family 4 163 1.5E-31 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 Clos_1798 2328b412cd11a2095f6258921f275367 188 Gene3D G3DSA:3.40.50.850 1 174 7.4E-39 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Clos_0041 dff0b695bfd3556d83afa0a6b0851231 238 Gene3D G3DSA:3.40.50.2300 1 128 1.7E-25 T 11-10-2018 Clos_0041 dff0b695bfd3556d83afa0a6b0851231 238 SUPERFAMILY SSF52172 1 125 7.68E-23 T 11-10-2018 IPR011006 CheY-like superfamily Clos_0041 dff0b695bfd3556d83afa0a6b0851231 238 Pfam PF00072 Response regulator receiver domain 5 116 5.4E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_0041 dff0b695bfd3556d83afa0a6b0851231 238 SMART SM00850 138 230 3.1E-25 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_0041 dff0b695bfd3556d83afa0a6b0851231 238 Gene3D G3DSA:2.40.50.1020 129 236 4.8E-20 T 11-10-2018 Clos_0041 dff0b695bfd3556d83afa0a6b0851231 238 Pfam PF04397 LytTr DNA-binding domain 139 228 2.4E-22 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Clos_0041 dff0b695bfd3556d83afa0a6b0851231 238 SMART SM00448 1 117 5.9E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Clos_1819 8e625bd806353c4b4e5f69204ca0bb2b 345 SUPERFAMILY SSF53098 28 216 7.6E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_1819 8e625bd806353c4b4e5f69204ca0bb2b 345 Pfam PF13482 RNase_H superfamily 29 194 1.8E-38 T 11-10-2018 IPR038720 YprB, ribonuclease H-like domain Clos_1819 8e625bd806353c4b4e5f69204ca0bb2b 345 Gene3D G3DSA:3.30.420.10 26 192 1.5E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_1376 1fd936045fde25971b4629d4d2d108e2 332 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 19 330 6.4E-99 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_1376 1fd936045fde25971b4629d4d2d108e2 332 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 7 332 23.083 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_1376 1fd936045fde25971b4629d4d2d108e2 332 Pfam PF00953 Glycosyl transferase family 4 80 258 1.1E-37 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Clos_1376 1fd936045fde25971b4629d4d2d108e2 332 ProSitePatterns PS01348 MraY family signature 2. 178 189 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_2160 097b880e34170a91ac2de41cca8d4f1d 316 SUPERFAMILY SSF161098 89 292 8.5E-15 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2160 097b880e34170a91ac2de41cca8d4f1d 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 315 2.9E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2160 097b880e34170a91ac2de41cca8d4f1d 316 Gene3D G3DSA:1.10.3720.10 76 315 5.2E-18 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2821 c0b3903691f62eacc73953b758558e89 120 Pfam PF12728 Helix-turn-helix domain 46 114 2.9E-6 T 11-10-2018 Clos_2730 673c5bd6620137ab953570cad39bf939 172 Pfam PF13302 Acetyltransferase (GNAT) domain 39 146 1.2E-16 T 11-10-2018 IPR000182 GNAT domain Clos_2730 673c5bd6620137ab953570cad39bf939 172 Gene3D G3DSA:3.40.630.30 1 172 2.9E-33 T 11-10-2018 Clos_2730 673c5bd6620137ab953570cad39bf939 172 SUPERFAMILY SSF55729 3 169 1.87E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0373 6dabc9b3e90f51c7428a37e5a19ad81d 441 Pfam PF00860 Permease family 28 403 4.7E-46 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Clos_0373 6dabc9b3e90f51c7428a37e5a19ad81d 441 PIRSF PIRSF005353 2 441 4.6E-188 T 11-10-2018 IPR026033 Purine permease PbuG-like Clos_0661 29f264cda862e2faba177e2923e73e01 294 PIRSF PIRSF003097 2 292 1.0E-60 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Clos_1486 6f4e3d580e1482e94b8e6d9e160abcdc 141 Pfam PF03963 Flagellar hook capping protein - N-terminal region 9 77 2.1E-25 T 11-10-2018 IPR005648 Flagellar hook capping protein Clos_2840 0997980142c5361c4a6898af4fc745b7 137 Pfam PF00293 NUDIX domain 7 103 2.0E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_2840 0997980142c5361c4a6898af4fc745b7 137 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Clos_2840 0997980142c5361c4a6898af4fc745b7 137 SUPERFAMILY SSF55811 7 107 1.35E-22 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_2840 0997980142c5361c4a6898af4fc745b7 137 Gene3D G3DSA:3.90.79.10 4 127 7.3E-20 T 11-10-2018 Clos_0061 5b1b3ececa014abd9be6423eb0b6ed7b 109 Gene3D G3DSA:3.30.70.120 1 103 1.1E-43 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clos_0061 5b1b3ececa014abd9be6423eb0b6ed7b 109 SUPERFAMILY SSF54913 1 108 2.48E-13 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Clos_0061 5b1b3ececa014abd9be6423eb0b6ed7b 109 Pfam PF06153 Cyclic-di-AMP receptor 1 108 1.3E-48 T 11-10-2018 IPR010375 Cyclic-di-AMP receptor Clos_2770 6e721881e0ec2b2994c632a847b47066 271 Pfam PF12640 UPF0489 domain 16 197 5.4E-32 T 11-10-2018 IPR024131 Uncharacterised protein family UPF0489 Clos_0411 40a37c462437348d9282af0c824360e6 380 Pfam PF01170 Putative RNA methylase family UPF0020 163 368 3.7E-57 T 11-10-2018 IPR000241 Putative RNA methylase domain Clos_0411 40a37c462437348d9282af0c824360e6 380 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Clos_0411 40a37c462437348d9282af0c824360e6 380 SUPERFAMILY SSF53335 144 373 4.93E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_0411 40a37c462437348d9282af0c824360e6 380 Gene3D G3DSA:3.30.2130.30 8 246 2.3E-122 T 11-10-2018 Clos_0411 40a37c462437348d9282af0c824360e6 380 SMART SM00981 58 155 2.8E-11 T 11-10-2018 IPR004114 THUMP domain GO:0003723 Clos_0411 40a37c462437348d9282af0c824360e6 380 Pfam PF02926 THUMP domain 20 154 9.2E-12 T 11-10-2018 IPR004114 THUMP domain GO:0003723 Clos_0411 40a37c462437348d9282af0c824360e6 380 Gene3D G3DSA:3.40.50.150 161 367 2.3E-122 T 11-10-2018 Clos_0411 40a37c462437348d9282af0c824360e6 380 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 11-10-2018 IPR000241 Putative RNA methylase domain Clos_1503 357253241b5ac16033af6f3d91e85bb5 300 Gene3D G3DSA:3.40.50.300 33 274 5.7E-59 T 11-10-2018 Clos_1503 357253241b5ac16033af6f3d91e85bb5 300 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 33 273 3.7E-21 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Clos_1503 357253241b5ac16033af6f3d91e85bb5 300 SUPERFAMILY SSF52540 33 289 3.99E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1503 357253241b5ac16033af6f3d91e85bb5 300 PIRSF PIRSF003092 1 300 5.7E-95 T 11-10-2018 IPR025501 ATP binding protein MinD Clos_1476 d7f0af6f6a458067dea91f13fed5dde7 131 Pfam PF00460 Flagella basal body rod protein 5 35 1.2E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Clos_1476 d7f0af6f6a458067dea91f13fed5dde7 131 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Clos_1476 d7f0af6f6a458067dea91f13fed5dde7 131 PIRSF PIRSF002889 1 130 3.2E-36 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Clos_1476 d7f0af6f6a458067dea91f13fed5dde7 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 3 128 2.0E-33 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Clos_2468 adb4c8264959a00956ca925e7e2a6a61 149 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 144 7.6E-42 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Clos_2468 adb4c8264959a00956ca925e7e2a6a61 149 SUPERFAMILY SSF55729 4 145 7.36E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2468 adb4c8264959a00956ca925e7e2a6a61 149 Gene3D G3DSA:3.40.630.30 5 148 3.8E-42 T 11-10-2018 Clos_2468 adb4c8264959a00956ca925e7e2a6a61 149 Pfam PF00583 Acetyltransferase (GNAT) family 15 124 4.3E-19 T 11-10-2018 IPR000182 GNAT domain Clos_2366 a25d92ce587340b485bbc22a5da1a4a3 233 SUPERFAMILY SSF48695 66 230 8.37E-32 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily Clos_2366 a25d92ce587340b485bbc22a5da1a4a3 233 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 98 225 1.6E-14 T 11-10-2018 IPR010181 CGCAxxGCC motif Clos_2177 bc14ac84600d82a8faae367e3e908569 53 Pfam PF07561 Domain of Unknown Function (DUF1540) 8 49 6.3E-13 T 11-10-2018 IPR011437 Domain of unknown function DUF1540 Clos_0343 7a1a91116a53046f3c892d44453a1e85 212 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 177 1.7E-19 T 11-10-2018 Clos_0343 7a1a91116a53046f3c892d44453a1e85 212 SUPERFAMILY SSF56784 3 210 5.56E-31 T 11-10-2018 IPR036412 HAD-like superfamily Clos_0343 7a1a91116a53046f3c892d44453a1e85 212 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 175 4.7E-17 T 11-10-2018 Clos_0343 7a1a91116a53046f3c892d44453a1e85 212 Gene3D G3DSA:3.40.50.1000 5 199 2.7E-40 T 11-10-2018 IPR023214 HAD superfamily Clos_0343 7a1a91116a53046f3c892d44453a1e85 212 Gene3D G3DSA:1.10.150.210 16 78 2.7E-40 T 11-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 Clos_2864 e5efad8ffc753acf4241be3cdd1d8f83 293 SMART SM00046 2 127 4.9E-14 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Clos_2864 e5efad8ffc753acf4241be3cdd1d8f83 293 Gene3D G3DSA:2.60.200.40 127 286 2.8E-44 T 11-10-2018 Clos_2864 e5efad8ffc753acf4241be3cdd1d8f83 293 Gene3D G3DSA:3.40.50.10330 2 126 1.2E-40 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Clos_2864 e5efad8ffc753acf4241be3cdd1d8f83 293 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 124 1.1E-36 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Clos_2864 e5efad8ffc753acf4241be3cdd1d8f83 293 SUPERFAMILY SSF111331 3 293 2.13E-82 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Clos_2864 e5efad8ffc753acf4241be3cdd1d8f83 293 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 293 5.5E-67 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase Clos_0211 c89465f126f90450403bf203f8c7e229 163 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 6 158 8.0E-43 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Clos_0211 c89465f126f90450403bf203f8c7e229 163 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 6 134 1.4E-44 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Clos_0211 c89465f126f90450403bf203f8c7e229 163 Gene3D G3DSA:3.40.50.300 1 162 2.5E-51 T 11-10-2018 Clos_0211 c89465f126f90450403bf203f8c7e229 163 SUPERFAMILY SSF52540 3 159 2.54E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2776 08343ece88ef745298d97090cd6c51bd 55 TIGRFAM TIGR04129 CxxH_BA5709: CxxH/CxxC protein, BA_5709 family 2 54 2.0E-20 T 11-10-2018 IPR025626 YyzF-like protein Clos_2776 08343ece88ef745298d97090cd6c51bd 55 Pfam PF14116 YyzF-like protein 4 55 4.7E-22 T 11-10-2018 IPR025626 YyzF-like protein Clos_0901 7d53b0713598c080bf73b6755b73c64b 81 Pfam PF11007 Spore coat associated protein JA (CotJA) 37 70 7.8E-14 T 11-10-2018 IPR020256 Spore coat protein CotJA Clos_2761 c842584fd27a2fd5e787a45632800757 359 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 15 197 1.7E-10 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Clos_2761 c842584fd27a2fd5e787a45632800757 359 Gene3D G3DSA:3.60.21.10 5 252 6.4E-39 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Clos_2761 c842584fd27a2fd5e787a45632800757 359 SUPERFAMILY SSF56300 6 263 2.37E-32 T 11-10-2018 Clos_0316 9f9087ae32db8ad92bd0991e38fdcb26 368 Pfam PF03845 Spore germination protein 10 326 6.2E-61 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Clos_0316 9f9087ae32db8ad92bd0991e38fdcb26 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 360 8.4E-67 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Clos_2742 4d2c07bdd7012b9ed3887e9f0216ae99 467 PRINTS PR00175 Sodium/alanine symporter signature 308 326 5.1E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_2742 4d2c07bdd7012b9ed3887e9f0216ae99 467 PRINTS PR00175 Sodium/alanine symporter signature 352 374 5.1E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_2742 4d2c07bdd7012b9ed3887e9f0216ae99 467 PRINTS PR00175 Sodium/alanine symporter signature 94 116 5.1E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_2742 4d2c07bdd7012b9ed3887e9f0216ae99 467 PRINTS PR00175 Sodium/alanine symporter signature 213 232 5.1E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_2742 4d2c07bdd7012b9ed3887e9f0216ae99 467 PRINTS PR00175 Sodium/alanine symporter signature 185 203 5.1E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_2742 4d2c07bdd7012b9ed3887e9f0216ae99 467 PRINTS PR00175 Sodium/alanine symporter signature 412 432 5.1E-57 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_2742 4d2c07bdd7012b9ed3887e9f0216ae99 467 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 2.1E-149 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_2742 4d2c07bdd7012b9ed3887e9f0216ae99 467 Pfam PF01235 Sodium:alanine symporter family 55 451 5.1E-148 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Clos_2185 0775fc4a9cea2cde41a808b739cbf3b7 142 Pfam PF04073 Aminoacyl-tRNA editing domain 15 130 4.7E-24 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Clos_2185 0775fc4a9cea2cde41a808b739cbf3b7 142 Gene3D G3DSA:3.90.960.10 1 142 1.8E-42 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Clos_2185 0775fc4a9cea2cde41a808b739cbf3b7 142 SUPERFAMILY SSF55826 1 142 2.22E-37 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Clos_1708 8f6d155db7ff7882cb0f3c72bb4e324b 102 PIRSF PIRSF020408 1 101 5.4E-35 T 11-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 Clos_1708 8f6d155db7ff7882cb0f3c72bb4e324b 102 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 3 91 4.0E-18 T 11-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 Clos_2363 3ad02a937f81f27bdad733ed8c213ead 424 Gene3D G3DSA:1.20.140.10 328 424 6.3E-22 T 11-10-2018 Clos_2363 3ad02a937f81f27bdad733ed8c213ead 424 SUPERFAMILY SSF48695 52 422 1.75E-117 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily Clos_2363 3ad02a937f81f27bdad733ed8c213ead 424 Pfam PF02335 Cytochrome c552 57 422 4.5E-102 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Clos_2363 3ad02a937f81f27bdad733ed8c213ead 424 PIRSF PIRSF000243 2 424 9.3E-102 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 Clos_2363 3ad02a937f81f27bdad733ed8c213ead 424 Gene3D G3DSA:1.10.1130.10 44 327 2.5E-82 T 11-10-2018 Clos_0618 57a3d266f41e43aa4da38a8b0efc5008 140 Gene3D G3DSA:1.10.10.10 1 86 1.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_0618 57a3d266f41e43aa4da38a8b0efc5008 140 Gene3D G3DSA:3.30.1490.190 87 140 8.6E-9 T 11-10-2018 Clos_0618 57a3d266f41e43aa4da38a8b0efc5008 140 Pfam PF01475 Ferric uptake regulator family 15 107 1.5E-26 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Clos_0618 57a3d266f41e43aa4da38a8b0efc5008 140 SUPERFAMILY SSF46785 7 134 3.13E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_0531 d3e4010fc25c47b7062b178f435415fb 126 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 22 120 4.1E-16 T 11-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Clos_2822 2dd9cde43d96a7646b482aebf8160cb4 483 Pfam PF03553 Na+/H+ antiporter family 21 219 1.0E-12 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Clos_2349 8c8a78b5afcc099598ed28580b60a959 78 SMART SM00530 4 59 2.7E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_2349 8c8a78b5afcc099598ed28580b60a959 78 Pfam PF01381 Helix-turn-helix 5 58 5.0E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Clos_2349 8c8a78b5afcc099598ed28580b60a959 78 SUPERFAMILY SSF47413 2 63 8.04E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Clos_2349 8c8a78b5afcc099598ed28580b60a959 78 Gene3D G3DSA:1.10.260.40 1 65 3.6E-23 T 11-10-2018 Clos_0858 a5378f6f7ce41ee83df8a0167012582f 450 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 31 421 3.2E-100 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Clos_0858 a5378f6f7ce41ee83df8a0167012582f 450 Pfam PF02386 Cation transport protein 22 432 1.9E-58 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Clos_2060 9c4b14953c83d5cfce7bb1b7332ec855 190 Pfam PF14907 Uncharacterised nucleotidyltransferase 34 131 4.9E-8 T 11-10-2018 IPR039498 Uncharacterised nucleotidyltransferase Clos_2060 9c4b14953c83d5cfce7bb1b7332ec855 190 Gene3D G3DSA:3.30.460.40 1 151 8.8E-45 T 11-10-2018 Clos_2060 9c4b14953c83d5cfce7bb1b7332ec855 190 SUPERFAMILY SSF81301 2 152 4.09E-40 T 11-10-2018 Clos_2717 8478b55b2723ae4d9c671c106b58cf4f 231 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 11 219 1.4E-62 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Clos_2534 08c497e7e931e84a42f1cff75bb6fa41 143 Pfam PF06949 Protein of unknown function (DUF1292) 68 134 5.1E-14 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 Clos_0598 7a2f22a7646c391a93d659573c19c9fd 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 1.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0598 7a2f22a7646c391a93d659573c19c9fd 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0598 7a2f22a7646c391a93d659573c19c9fd 196 Gene3D G3DSA:1.10.357.10 1 192 1.3E-24 T 11-10-2018 Clos_0598 7a2f22a7646c391a93d659573c19c9fd 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 1.9E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0598 7a2f22a7646c391a93d659573c19c9fd 196 SUPERFAMILY SSF46689 3 70 1.9E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_1681 7f47b7ef81e465d6f5d7def547dfbab3 360 SUPERFAMILY SSF52540 109 325 6.75E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1681 7f47b7ef81e465d6f5d7def547dfbab3 360 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 27 325 30.836 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Clos_1681 7f47b7ef81e465d6f5d7def547dfbab3 360 Pfam PF03193 RsgA GTPase 91 263 5.2E-46 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Clos_1681 7f47b7ef81e465d6f5d7def547dfbab3 360 Gene3D G3DSA:1.10.40.50 263 335 7.3E-22 T 11-10-2018 Clos_1681 7f47b7ef81e465d6f5d7def547dfbab3 360 Gene3D G3DSA:3.40.50.300 94 262 1.5E-45 T 11-10-2018 Clos_1681 7f47b7ef81e465d6f5d7def547dfbab3 360 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 69 317 1.3E-47 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Clos_1681 7f47b7ef81e465d6f5d7def547dfbab3 360 SUPERFAMILY SSF50249 27 94 6.77E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Clos_0772 fc2965738d48209af309fa60f7e780e8 192 Gene3D G3DSA:3.40.50.300 14 189 2.9E-39 T 11-10-2018 Clos_0772 fc2965738d48209af309fa60f7e780e8 192 SUPERFAMILY SSF52540 18 182 3.53E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0772 fc2965738d48209af309fa60f7e780e8 192 Pfam PF07931 Chloramphenicol phosphotransferase-like protein 18 181 8.4E-11 T 11-10-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 Clos_1810 0391db1a41f8b025c6443f3d28d5dcd5 114 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 8.3E-28 T 11-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Clos_0956 6aceab33c56737cb8e6cf20fa61bc0af 428 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 2 426 6.8E-213 T 11-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Clos_0956 6aceab33c56737cb8e6cf20fa61bc0af 428 PIRSF PIRSF011588 1 428 3.8E-219 T 11-10-2018 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 Clos_2524 697b2b4817cc5554b291e8e75a0af47c 141 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 2 138 2.5E-44 T 11-10-2018 IPR022258 Flagellar operon protein YvyF Clos_2680 8e0d3356731681d9a0dc3fb1ec7660bb 213 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 209 5.4E-40 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Clos_2680 8e0d3356731681d9a0dc3fb1ec7660bb 213 Gene3D G3DSA:3.40.1180.10 1 213 1.9E-47 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Clos_2680 8e0d3356731681d9a0dc3fb1ec7660bb 213 SUPERFAMILY SSF64005 2 207 9.68E-48 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Clos_0256 0f127d94c03ec13b1e004dc421db5ac7 400 Pfam PF01594 AI-2E family transporter 41 379 1.1E-58 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Clos_1914 ac0307d0cea551c9a8fd6b8479598e46 429 Pfam PF03432 Relaxase/Mobilisation nuclease domain 121 357 5.6E-37 T 11-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 Clos_1694 8c1ca0b4ecfd6cbc047846a2dd4d5622 452 PIRSF PIRSF004729 2 451 2.0E-154 T 11-10-2018 IPR006230 Protein MutL Clos_1694 8c1ca0b4ecfd6cbc047846a2dd4d5622 452 Pfam PF13941 MutL protein 5 448 2.2E-169 T 11-10-2018 IPR006230 Protein MutL Clos_1694 8c1ca0b4ecfd6cbc047846a2dd4d5622 452 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 51 448 1.3E-86 T 11-10-2018 IPR006230 Protein MutL Clos_2421 ce3e75e66e643f5f4368ee6520809688 186 Pfam PF12822 ECF transporter, substrate-specific component 21 177 1.4E-14 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Clos_2421 ce3e75e66e643f5f4368ee6520809688 186 Gene3D G3DSA:1.10.1760.20 9 186 3.7E-42 T 11-10-2018 Clos_2421 ce3e75e66e643f5f4368ee6520809688 186 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 17 181 7.3E-38 T 11-10-2018 IPR030949 ECF transporter S component, folate family Clos_1299 355c6b647de8032df678453852d07dbe 229 Gene3D G3DSA:3.20.20.70 19 227 5.0E-21 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_1299 355c6b647de8032df678453852d07dbe 229 Pfam PF04055 Radical SAM superfamily 27 181 1.3E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Clos_1299 355c6b647de8032df678453852d07dbe 229 SUPERFAMILY SSF102114 16 204 2.49E-19 T 11-10-2018 Clos_2741 af42a71b3b52a9547bc2723257cac372 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 194 1.5E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Clos_2741 af42a71b3b52a9547bc2723257cac372 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 199 7.3E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Clos_2741 af42a71b3b52a9547bc2723257cac372 231 SUPERFAMILY SSF56784 3 228 3.02E-49 T 11-10-2018 IPR036412 HAD-like superfamily Clos_2741 af42a71b3b52a9547bc2723257cac372 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 6.2E-29 T 11-10-2018 Clos_2741 af42a71b3b52a9547bc2723257cac372 231 Gene3D G3DSA:1.10.150.240 16 100 2.9E-74 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Clos_2741 af42a71b3b52a9547bc2723257cac372 231 Gene3D G3DSA:3.40.50.1000 5 222 2.9E-74 T 11-10-2018 IPR023214 HAD superfamily Clos_2741 af42a71b3b52a9547bc2723257cac372 231 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 227 1.1E-69 T 11-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 Clos_1883 031ea4907a186a4e32406228d4bb5ef6 1251 Gene3D G3DSA:2.60.40.10 288 393 2.9E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold Clos_2652 283e00be4bc6bea3984e5c801e7f88aa 404 Pfam PF01882 Protein of unknown function DUF58 190 273 2.1E-19 T 11-10-2018 IPR002881 Domain of unknown function DUF58 Clos_0865 b92622298b28a15603e074eaa1087a4d 459 PIRSF PIRSF006060 1 459 3.4E-84 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Clos_0865 b92622298b28a15603e074eaa1087a4d 459 Gene3D G3DSA:1.20.1740.10 16 459 8.2E-96 T 11-10-2018 Clos_0865 b92622298b28a15603e074eaa1087a4d 459 Pfam PF13520 Amino acid permease 20 425 3.0E-61 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Clos_0937 b008421260d014ad31a133b77b457e36 165 SUPERFAMILY SSF55826 6 154 8.5E-38 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Clos_0937 b008421260d014ad31a133b77b457e36 165 Gene3D G3DSA:3.90.960.10 1 159 1.5E-46 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Clos_0937 b008421260d014ad31a133b77b457e36 165 PIRSF PIRSF006181 2 160 8.1E-57 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Clos_0937 b008421260d014ad31a133b77b457e36 165 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 156 8.3E-54 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Clos_0937 b008421260d014ad31a133b77b457e36 165 Pfam PF04073 Aminoacyl-tRNA editing domain 36 148 1.8E-23 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Clos_1088 959032a12df60b4e4b5b606de62778d5 118 Pfam PF04324 BFD-like [2Fe-2S] binding domain 55 112 6.5E-7 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Clos_1088 959032a12df60b4e4b5b606de62778d5 118 Gene3D G3DSA:1.10.10.1100 44 113 5.4E-26 T 11-10-2018 Clos_0892 1b6da1406f61d32ee107ef394a13860b 75 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 21 32 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0892 1b6da1406f61d32ee107ef394a13860b 75 SUPERFAMILY SSF54862 12 71 7.81E-16 T 11-10-2018 Clos_0892 1b6da1406f61d32ee107ef394a13860b 75 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Clos_0892 1b6da1406f61d32ee107ef394a13860b 75 Gene3D G3DSA:3.30.70.20 40 73 1.1E-5 T 11-10-2018 Clos_0892 1b6da1406f61d32ee107ef394a13860b 75 Gene3D G3DSA:3.30.70.20 2 39 7.9E-8 T 11-10-2018 Clos_0892 1b6da1406f61d32ee107ef394a13860b 75 Pfam PF14697 4Fe-4S dicluster domain 14 66 4.7E-11 T 11-10-2018 Clos_1965 f674ee4ddc6b9e7aba164e4f57856d19 263 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 7 260 8.4E-104 T 11-10-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family Clos_1596 f7d50c6e1f5c694e20bf016ddd6d4dd1 362 Pfam PF12982 Protein of unknown function (DUF3866) 32 349 1.0E-132 T 11-10-2018 IPR024479 Protein of unknown function DUF3866 Clos_2001 953348cf8faf5955ce834a0e5470e1c8 269 Pfam PF00665 Integrase core domain 107 222 4.6E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Clos_2001 953348cf8faf5955ce834a0e5470e1c8 269 Gene3D G3DSA:3.30.420.10 103 258 5.4E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Clos_2001 953348cf8faf5955ce834a0e5470e1c8 269 Pfam PF13276 HTH-like domain 27 80 1.7E-14 T 11-10-2018 IPR025948 HTH-like domain Clos_2001 953348cf8faf5955ce834a0e5470e1c8 269 SUPERFAMILY SSF53098 100 261 8.5E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Clos_2431 f35cab05ed7d899b571541d919f70b66 351 Pfam PF01497 Periplasmic binding protein 70 315 3.7E-30 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Clos_2431 f35cab05ed7d899b571541d919f70b66 351 Gene3D G3DSA:3.40.50.1980 47 187 3.4E-37 T 11-10-2018 Clos_2431 f35cab05ed7d899b571541d919f70b66 351 Gene3D G3DSA:3.40.50.1980 189 351 3.7E-53 T 11-10-2018 Clos_2431 f35cab05ed7d899b571541d919f70b66 351 SUPERFAMILY SSF53807 65 341 2.39E-45 T 11-10-2018 Clos_1439 9450b26b7d3f1ae4e3a3814a38e67419 118 Pfam PF03780 Asp23 family, cell envelope-related function 9 115 5.8E-34 T 11-10-2018 IPR005531 Alkaline shock protein Asp23 Clos_2488 5079c4850fc77c0b4e0011a907e67ff8 160 Gene3D G3DSA:1.20.58.300 8 133 1.1E-5 T 11-10-2018 Clos_2488 5079c4850fc77c0b4e0011a907e67ff8 160 Pfam PF05130 FlgN protein 1 150 6.0E-21 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Clos_2488 5079c4850fc77c0b4e0011a907e67ff8 160 SUPERFAMILY SSF140566 20 130 3.53E-8 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Clos_0134 e9f2b9b69a532cb206c95a0acda9a06e 182 Pfam PF00857 Isochorismatase family 12 159 2.3E-31 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 Clos_0134 e9f2b9b69a532cb206c95a0acda9a06e 182 SUPERFAMILY SSF52499 5 182 3.92E-48 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Clos_0134 e9f2b9b69a532cb206c95a0acda9a06e 182 Gene3D G3DSA:3.40.50.850 3 182 3.2E-57 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Clos_1095 277f9fea2fa7d9bf35bdae8f0c7b390e 197 Gene3D G3DSA:3.90.550.10 2 196 4.9E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_1095 277f9fea2fa7d9bf35bdae8f0c7b390e 197 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 195 22.27 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Clos_1095 277f9fea2fa7d9bf35bdae8f0c7b390e 197 Pfam PF12804 MobA-like NTP transferase domain 8 149 2.6E-30 T 11-10-2018 IPR025877 MobA-like NTP transferase Clos_1095 277f9fea2fa7d9bf35bdae8f0c7b390e 197 SUPERFAMILY SSF53448 5 189 1.88E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0809 09c83ec1a09f8e35e42f0887858ba0d0 186 Pfam PF12952 Domain of unknown function (DUF3841) 5 181 9.8E-65 T 11-10-2018 IPR024211 Protein of unknown function DUF3841 Clos_2619 24cd3bb24654c3227e7af8d7ca25b05e 236 Gene3D G3DSA:3.40.50.300 4 233 1.5E-65 T 11-10-2018 Clos_2619 24cd3bb24654c3227e7af8d7ca25b05e 236 Pfam PF00005 ABC transporter 27 169 3.3E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_2619 24cd3bb24654c3227e7af8d7ca25b05e 236 SUPERFAMILY SSF52540 6 226 1.42E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2619 24cd3bb24654c3227e7af8d7ca25b05e 236 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_2619 24cd3bb24654c3227e7af8d7ca25b05e 236 SMART SM00382 35 218 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_1022 8ae2cd6eacd2fac6f1e1309401d11643 246 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 237 1.4E-63 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Clos_1022 8ae2cd6eacd2fac6f1e1309401d11643 246 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 225 1.1E-49 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Clos_0287 0f2e653186cb77f16f841d1b115ea6b1 244 Pfam PF12804 MobA-like NTP transferase domain 3 127 9.8E-16 T 11-10-2018 IPR025877 MobA-like NTP transferase Clos_0287 0f2e653186cb77f16f841d1b115ea6b1 244 Gene3D G3DSA:3.90.550.10 1 238 1.9E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0287 0f2e653186cb77f16f841d1b115ea6b1 244 SUPERFAMILY SSF53448 1 236 2.93E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Clos_0786 d71f946ace1ce9a0a2f6affb65788154 82 Pfam PF11391 Protein of unknown function (DUF2798) 22 78 1.4E-11 T 11-10-2018 IPR021529 Protein of unknown function DUF2798 Clos_2486 c1269029077b6d4a8aefe36284f78e12 201 Pfam PF17248 Family of unknown function (DUF5317) 26 176 6.0E-37 T 11-10-2018 IPR035168 Protein of unknown function DUF5317 Clos_2651 cf7b981b03cf9f745e7742c1f1385d01 729 SMART SM00460 455 525 1.8E-19 T 11-10-2018 IPR002931 Transglutaminase-like Clos_2651 cf7b981b03cf9f745e7742c1f1385d01 729 Pfam PF01841 Transglutaminase-like superfamily 409 523 2.0E-26 T 11-10-2018 IPR002931 Transglutaminase-like Clos_2651 cf7b981b03cf9f745e7742c1f1385d01 729 Gene3D G3DSA:3.10.620.30 370 541 3.0E-24 T 11-10-2018 Clos_2651 cf7b981b03cf9f745e7742c1f1385d01 729 Pfam PF13559 Domain of unknown function (DUF4129) 638 697 3.3E-5 T 11-10-2018 IPR025403 Domain of unknown function DUF4129 Clos_2651 cf7b981b03cf9f745e7742c1f1385d01 729 SUPERFAMILY SSF54001 389 529 1.96E-37 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Clos_2264 51d50110e2d9daf91ef3bbf1996a9105 938 Pfam PF09992 Phosphodiester glycosidase 205 383 1.5E-30 T 11-10-2018 IPR018711 Phosphodiester glycosidase Clos_2264 51d50110e2d9daf91ef3bbf1996a9105 938 SUPERFAMILY SSF56300 798 878 3.57E-5 T 11-10-2018 Clos_2230 eb6078fc528633f8290b396de91fbaaa 70 SUPERFAMILY SSF143422 15 63 7.32E-8 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Clos_2230 eb6078fc528633f8290b396de91fbaaa 70 Gene3D G3DSA:3.30.70.1290 4 66 5.7E-11 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Clos_2230 eb6078fc528633f8290b396de91fbaaa 70 Pfam PF01797 Transposase IS200 like 16 64 9.7E-5 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Clos_1634 3f655cd6e5fb6023c69f9e0cf4da5d4c 252 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 109 126 1.2E-6 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Clos_1634 3f655cd6e5fb6023c69f9e0cf4da5d4c 252 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 166 176 1.2E-6 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Clos_1634 3f655cd6e5fb6023c69f9e0cf4da5d4c 252 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 177 188 1.2E-6 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Clos_1634 3f655cd6e5fb6023c69f9e0cf4da5d4c 252 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 189 204 1.2E-6 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Clos_1634 3f655cd6e5fb6023c69f9e0cf4da5d4c 252 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 7 90 5.9E-34 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal Clos_1634 3f655cd6e5fb6023c69f9e0cf4da5d4c 252 Pfam PF01478 Type IV leader peptidase family 101 208 3.9E-16 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Clos_1828 0ed539d7267d3a88fdf8ef0e367da44d 303 SUPERFAMILY SSF53659 5 299 1.15E-58 T 11-10-2018 Clos_1828 0ed539d7267d3a88fdf8ef0e367da44d 303 PIRSF PIRSF000428 1 303 2.5E-84 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Clos_1828 0ed539d7267d3a88fdf8ef0e367da44d 303 Pfam PF01515 Phosphate acetyl/butaryl transferase 6 74 9.4E-8 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Clos_1828 0ed539d7267d3a88fdf8ef0e367da44d 303 Pfam PF01515 Phosphate acetyl/butaryl transferase 76 294 6.5E-41 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Clos_1828 0ed539d7267d3a88fdf8ef0e367da44d 303 Gene3D G3DSA:3.40.718.10 2 300 3.0E-102 T 11-10-2018 Clos_0702 17dfe6ce1642e49b0defb225990680c1 193 Gene3D G3DSA:2.60.60.30 19 187 2.4E-68 T 11-10-2018 Clos_0702 17dfe6ce1642e49b0defb225990680c1 193 Pfam PF02342 TerD domain 1 188 1.5E-82 T 11-10-2018 IPR003325 TerD domain Clos_0253 8603895ea2843bd2412937a5360c4d99 443 Pfam PF14403 Circularly permuted ATP-grasp type 2 108 396 3.9E-14 T 11-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Clos_0253 8603895ea2843bd2412937a5360c4d99 443 SUPERFAMILY SSF56059 5 428 2.29E-51 T 11-10-2018 Clos_0371 efab81cf1847e38abe63fd950c2beeda 96 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 4.2E-31 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Clos_0371 efab81cf1847e38abe63fd950c2beeda 96 SUPERFAMILY SSF159133 1 87 3.53E-29 T 11-10-2018 IPR036677 EutN/Ccml superfamily Clos_0371 efab81cf1847e38abe63fd950c2beeda 96 Gene3D G3DSA:2.40.50.220 1 94 1.8E-31 T 11-10-2018 IPR036677 EutN/Ccml superfamily Clos_0371 efab81cf1847e38abe63fd950c2beeda 96 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 83 8.0E-13 T 11-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Clos_1214 ddf15a4919b013e36f12604a12e834c0 150 Pfam PF13690 Chemotaxis phosphatase CheX 43 118 8.1E-11 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Clos_1214 ddf15a4919b013e36f12604a12e834c0 150 Gene3D G3DSA:3.40.1550.10 1 146 6.0E-26 T 11-10-2018 IPR028976 CheC-like superfamily Clos_1214 ddf15a4919b013e36f12604a12e834c0 150 SUPERFAMILY SSF103039 4 116 3.92E-20 T 11-10-2018 IPR028976 CheC-like superfamily Clos_2377 4f124fdb97ebc12b3817e8ebfca70c64 303 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 287 2.1E-41 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Clos_2568 152df51d4f71d0bb44156ac4fd2e5c66 75 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 11 63 9.3E-19 T 11-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter Clos_2042 e5906aab86b58d36c4abb13044155802 116 Pfam PF13789 Domain of unknown function (DUF4181) 15 105 5.4E-14 T 11-10-2018 IPR025441 Protein of unknown function DUF4181 Clos_2077 f8657f508fed753316a662aedea599e6 386 Gene3D G3DSA:1.20.1250.20 195 381 5.7E-35 T 11-10-2018 Clos_2077 f8657f508fed753316a662aedea599e6 386 SUPERFAMILY SSF103473 4 380 1.05E-53 T 11-10-2018 IPR036259 MFS transporter superfamily Clos_2077 f8657f508fed753316a662aedea599e6 386 Pfam PF07690 Major Facilitator Superfamily 14 336 2.3E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Clos_2077 f8657f508fed753316a662aedea599e6 386 Gene3D G3DSA:1.20.1250.20 8 194 2.2E-24 T 11-10-2018 Clos_1669 ff0cd0eb3424092de91da8e95a37955f 146 Pfam PF01592 NifU-like N terminal domain 1 121 3.2E-51 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Clos_1669 ff0cd0eb3424092de91da8e95a37955f 146 TIGRFAM TIGR03419 NifU_clost: FeS cluster assembly scaffold protein NifU 2 121 1.4E-65 T 11-10-2018 IPR017787 NIF system FeS cluster assembly, NifU-like Clos_1669 ff0cd0eb3424092de91da8e95a37955f 146 SUPERFAMILY SSF82649 4 125 7.06E-47 T 11-10-2018 Clos_1669 ff0cd0eb3424092de91da8e95a37955f 146 Gene3D G3DSA:3.90.1010.10 1 146 3.1E-60 T 11-10-2018 Clos_1310 5092fecd58cd9262c3b04b3001509bda 352 Pfam PF14281 PD-(D/E)XK nuclease superfamily 4 165 9.2E-15 T 11-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 Clos_2815 aef9de7323c5f26da827d31b8be0d5df 356 Gene3D G3DSA:2.130.10.10 79 351 6.9E-21 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Clos_2815 aef9de7323c5f26da827d31b8be0d5df 356 SUPERFAMILY SSF110296 61 349 2.09E-28 T 11-10-2018 Clos_0114 c445ef82e69dc459106556d3d02238fa 155 SUPERFAMILY SSF55729 12 146 2.66E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0114 c445ef82e69dc459106556d3d02238fa 155 Pfam PF00583 Acetyltransferase (GNAT) family 40 137 1.8E-15 T 11-10-2018 IPR000182 GNAT domain Clos_0114 c445ef82e69dc459106556d3d02238fa 155 Gene3D G3DSA:3.40.630.30 3 154 6.9E-24 T 11-10-2018 Clos_1139 e232521b1f242d6cf542e057b029b1a8 137 Gene3D G3DSA:3.10.530.10 51 118 5.4E-23 T 11-10-2018 IPR036593 CPE0013-like superfamily Clos_1139 e232521b1f242d6cf542e057b029b1a8 137 Pfam PF07892 Protein of unknown function (DUF1667) 38 118 4.8E-33 T 11-10-2018 IPR012460 Protein of unknown function DUF1667 Clos_1139 e232521b1f242d6cf542e057b029b1a8 137 SUPERFAMILY SSF160148 49 122 5.49E-25 T 11-10-2018 IPR036593 CPE0013-like superfamily Clos_2195 194e9a72c774007d168517e0baf52743 191 Pfam PF02698 DUF218 domain 38 181 2.1E-32 T 11-10-2018 IPR003848 Domain of unknown function DUF218 Clos_1924 240e3fb65d71b14ba9f370fa7a1cf124 265 PIRSF PIRSF009320 91 265 1.6E-5 T 11-10-2018 Clos_1924 240e3fb65d71b14ba9f370fa7a1cf124 265 PIRSF PIRSF009320 3 82 8.9E-15 T 11-10-2018 Clos_1924 240e3fb65d71b14ba9f370fa7a1cf124 265 Pfam PF13614 AAA domain 4 181 2.8E-60 T 11-10-2018 IPR025669 AAA domain Clos_1924 240e3fb65d71b14ba9f370fa7a1cf124 265 Gene3D G3DSA:3.40.50.300 2 264 4.4E-81 T 11-10-2018 Clos_1924 240e3fb65d71b14ba9f370fa7a1cf124 265 SUPERFAMILY SSF52540 4 262 5.23E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1986 72cc0ee399f5c31a503f91c0959d7466 93 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 65 92 8.8E-6 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_1986 72cc0ee399f5c31a503f91c0959d7466 93 Gene3D G3DSA:3.30.1390.10 58 93 2.1E-7 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Clos_1986 72cc0ee399f5c31a503f91c0959d7466 93 SUPERFAMILY SSF54736 65 92 5.76E-5 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Clos_2020 e0c84566ce301c2f45cea1f0688cdeba 279 PRINTS PR00303 Preprotein translocase SecY subunit signature 250 273 9.0E-5 T 11-10-2018 Clos_2020 e0c84566ce301c2f45cea1f0688cdeba 279 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 166 9.0E-5 T 11-10-2018 Clos_2020 e0c84566ce301c2f45cea1f0688cdeba 279 Gene3D G3DSA:1.10.3720.10 83 276 3.3E-35 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2020 e0c84566ce301c2f45cea1f0688cdeba 279 SUPERFAMILY SSF161098 86 270 1.57E-40 T 11-10-2018 IPR035906 MetI-like superfamily Clos_2020 e0c84566ce301c2f45cea1f0688cdeba 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 274 3.0E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_1060 b6d948967bc83366613323416ac6ef71 142 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 7 138 9.0E-30 T 11-10-2018 Clos_1060 b6d948967bc83366613323416ac6ef71 142 PIRSF PIRSF004923 1 142 9.3E-23 T 11-10-2018 IPR026268 Protein RseC Clos_0881 84d5ea7669cbefec2cc6c3b2c27c62ca 510 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 155 336 9.8E-36 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0881 84d5ea7669cbefec2cc6c3b2c27c62ca 510 SUPERFAMILY SSF58104 62 383 1.96E-55 T 11-10-2018 Clos_0881 84d5ea7669cbefec2cc6c3b2c27c62ca 510 Gene3D G3DSA:1.10.287.950 80 384 2.1E-55 T 11-10-2018 Clos_0881 84d5ea7669cbefec2cc6c3b2c27c62ca 510 SMART SM00283 109 384 2.1E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Clos_0565 8f8fa13a0341038fac51b1937eebcfef 56 SUPERFAMILY SSF47598 8 52 1.72E-9 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Clos_0565 8f8fa13a0341038fac51b1937eebcfef 56 Gene3D G3DSA:1.10.1220.10 6 53 1.6E-5 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Clos_1630 3f879f5c1f93a5b8d7ec7bab119b16c9 679 Pfam PF00395 S-layer homology domain 581 622 1.9E-9 T 11-10-2018 IPR001119 S-layer homology domain Clos_1630 3f879f5c1f93a5b8d7ec7bab119b16c9 679 Pfam PF00395 S-layer homology domain 519 560 1.5E-13 T 11-10-2018 IPR001119 S-layer homology domain Clos_2874 38a68a46508dd4eec0f7225e3faa1450 220 PRINTS PR01900 YidC translocation/secretion protein signature 144 159 2.2E-6 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Clos_2874 38a68a46508dd4eec0f7225e3faa1450 220 PRINTS PR01900 YidC translocation/secretion protein signature 165 189 2.2E-6 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Clos_2874 38a68a46508dd4eec0f7225e3faa1450 220 PRINTS PR01900 YidC translocation/secretion protein signature 7 23 2.2E-6 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Clos_2874 38a68a46508dd4eec0f7225e3faa1450 220 Pfam PF02096 60Kd inner membrane protein 22 210 2.7E-63 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Clos_2874 38a68a46508dd4eec0f7225e3faa1450 220 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 21 210 1.7E-64 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Clos_0321 c7f2e2b2c96462f360e730243c29cd56 281 Pfam PF00005 ABC transporter 17 160 9.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Clos_0321 c7f2e2b2c96462f360e730243c29cd56 281 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Clos_0321 c7f2e2b2c96462f360e730243c29cd56 281 SUPERFAMILY SSF52540 2 224 4.15E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_0321 c7f2e2b2c96462f360e730243c29cd56 281 SMART SM00382 26 211 5.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Clos_0321 c7f2e2b2c96462f360e730243c29cd56 281 Gene3D G3DSA:3.40.50.300 1 234 1.5E-70 T 11-10-2018 Clos_2022 2d087155571f77a358de082cb136965e 177 Gene3D G3DSA:1.10.10.10 10 95 1.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_2022 2d087155571f77a358de082cb136965e 177 SUPERFAMILY SSF46785 17 163 7.27E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_2022 2d087155571f77a358de082cb136965e 177 PIRSF PIRSF006707 1 177 6.3E-51 T 11-10-2018 IPR026282 DNA-binding protein, MJ1563 type Clos_2014 c55503ed348fd9e0f7f4930066e800ff 314 Pfam PF02517 CAAX protease self-immunity 121 206 8.6E-17 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Clos_0273 2fb0e0afe8c40f74cbccceea6555a169 452 SMART SM00900 140 214 1.4E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0273 2fb0e0afe8c40f74cbccceea6555a169 452 SMART SM00900 49 123 8.9E-16 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0273 2fb0e0afe8c40f74cbccceea6555a169 452 SMART SM00900 377 451 6.7E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0273 2fb0e0afe8c40f74cbccceea6555a169 452 SMART SM00900 243 317 2.1E-14 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0273 2fb0e0afe8c40f74cbccceea6555a169 452 Gene3D G3DSA:3.90.1010.20 77 133 2.9E-5 T 11-10-2018 Clos_0273 2fb0e0afe8c40f74cbccceea6555a169 452 Pfam PF04205 FMN-binding domain 49 120 4.1E-18 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0273 2fb0e0afe8c40f74cbccceea6555a169 452 Pfam PF04205 FMN-binding domain 377 448 4.9E-12 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0273 2fb0e0afe8c40f74cbccceea6555a169 452 Pfam PF04205 FMN-binding domain 243 315 4.5E-16 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0273 2fb0e0afe8c40f74cbccceea6555a169 452 Pfam PF04205 FMN-binding domain 140 211 6.6E-19 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Clos_0263 8686cd2f13ca0b8618d954baa4d4fb5c 279 SUPERFAMILY SSF56176 1 169 5.65E-36 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Clos_0263 8686cd2f13ca0b8618d954baa4d4fb5c 279 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 169 5.2E-27 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Clos_0263 8686cd2f13ca0b8618d954baa4d4fb5c 279 Gene3D G3DSA:3.30.465.10 4 172 5.8E-31 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Clos_0263 8686cd2f13ca0b8618d954baa4d4fb5c 279 SMART SM01092 178 274 0.0024 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Clos_0263 8686cd2f13ca0b8618d954baa4d4fb5c 279 SUPERFAMILY SSF55447 180 272 2.35E-10 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Clos_2695 a538a45c2fc17ca5b9a56949a67d0638 260 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 3.4E-103 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Clos_2695 a538a45c2fc17ca5b9a56949a67d0638 260 Gene3D G3DSA:3.40.1190.20 1 260 1.7E-110 T 11-10-2018 IPR029056 Ribokinase-like Clos_2695 a538a45c2fc17ca5b9a56949a67d0638 260 SUPERFAMILY SSF53613 1 259 3.74E-89 T 11-10-2018 IPR029056 Ribokinase-like Clos_2695 a538a45c2fc17ca5b9a56949a67d0638 260 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 256 1.7E-109 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Clos_1112 148caf308d8a866301350b6ba47e7c8b 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 3.0E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1112 148caf308d8a866301350b6ba47e7c8b 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 50 3.0E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1112 148caf308d8a866301350b6ba47e7c8b 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 3.0E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1112 148caf308d8a866301350b6ba47e7c8b 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 3.0E-21 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1112 148caf308d8a866301350b6ba47e7c8b 123 Gene3D G3DSA:1.10.10.10 5 103 9.8E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Clos_1112 148caf308d8a866301350b6ba47e7c8b 123 SMART SM00418 18 92 5.0E-30 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1112 148caf308d8a866301350b6ba47e7c8b 123 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 41 59 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Clos_1112 148caf308d8a866301350b6ba47e7c8b 123 SUPERFAMILY SSF46785 3 97 3.38E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Clos_1112 148caf308d8a866301350b6ba47e7c8b 123 Pfam PF01022 Bacterial regulatory protein, arsR family 25 70 9.6E-16 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Clos_1044 cd3a212c762c9c8bfd5514a83cab9bba 176 Pfam PF01957 NfeD-like C-terminal, partner-binding 64 172 7.9E-6 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain Clos_1044 cd3a212c762c9c8bfd5514a83cab9bba 176 Gene3D G3DSA:2.40.50.140 100 176 1.3E-10 T 11-10-2018 Clos_1581 f03a6cf87d1ccda2d53d2ae8a94add71 132 SUPERFAMILY SSF101386 6 88 2.24E-8 T 11-10-2018 Clos_1581 f03a6cf87d1ccda2d53d2ae8a94add71 132 Gene3D G3DSA:1.10.287.1080 1 96 2.4E-9 T 11-10-2018 Clos_1581 f03a6cf87d1ccda2d53d2ae8a94add71 132 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 21 86 1.2E-4 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Clos_0814 dd0ae5410aea55fd81cfd9288f530d83 418 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 1 147 4.2E-24 T 11-10-2018 IPR009827 Dicarboxylate carrier MatC N-terminal Clos_0380 2eb79efe13b9256eb4d2b1101bf68290 270 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 15 217 2.2E-45 T 11-10-2018 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC Clos_0939 1d5bc6884b175ee6ddef1274ec31d0ea 183 Pfam PF13490 Putative zinc-finger 8 42 1.5E-5 T 11-10-2018 IPR027383 Putative zinc-finger Clos_0113 7fbe99711daef7bd083a2cb2620e2e4c 245 SUPERFAMILY SSF52317 5 208 9.51E-24 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_0113 7fbe99711daef7bd083a2cb2620e2e4c 245 Pfam PF03575 Peptidase family S51 4 203 1.0E-49 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Clos_0113 7fbe99711daef7bd083a2cb2620e2e4c 245 Gene3D G3DSA:3.40.50.880 17 208 2.4E-42 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Clos_0254 68c03d49e4d785054c0e0edfc8742120 207 Pfam PF02659 Putative manganese efflux pump 50 203 2.5E-9 T 11-10-2018 IPR003810 Putative manganese efflux pump Clos_0641 a658d327ddf709d171cbbe7ac34016a0 244 Pfam PF13566 Domain of unknown function (DUF4130 83 243 7.7E-51 T 11-10-2018 IPR025404 Domain of unknown function DUF4130 Clos_0641 a658d327ddf709d171cbbe7ac34016a0 244 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 4 244 9.6E-85 T 11-10-2018 IPR023875 DNA metabolism protein, putative Clos_0156 43626a41d6a658ff305f6e5c77f2bf90 79 Pfam PF10960 BhlA holin family 1 70 2.6E-33 T 11-10-2018 IPR024405 Prophage protein BhlA/UviB Clos_0156 43626a41d6a658ff305f6e5c77f2bf90 79 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 1 72 4.0E-20 T 11-10-2018 IPR024405 Prophage protein BhlA/UviB Clos_1165 ca1b125973bce52639afa57782632bd7 382 Gene3D G3DSA:1.10.3860.10 2 381 3.5E-53 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Clos_1165 ca1b125973bce52639afa57782632bd7 382 PRINTS PR00173 Glutamate-aspartate symporter signature 199 218 6.2E-7 T 11-10-2018 Clos_1165 ca1b125973bce52639afa57782632bd7 382 PRINTS PR00173 Glutamate-aspartate symporter signature 269 295 6.2E-7 T 11-10-2018 Clos_1165 ca1b125973bce52639afa57782632bd7 382 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 6.2E-7 T 11-10-2018 Clos_1165 ca1b125973bce52639afa57782632bd7 382 PRINTS PR00173 Glutamate-aspartate symporter signature 304 323 6.2E-7 T 11-10-2018 Clos_1165 ca1b125973bce52639afa57782632bd7 382 SUPERFAMILY SSF118215 6 378 1.11E-80 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Clos_1165 ca1b125973bce52639afa57782632bd7 382 Pfam PF00375 Sodium:dicarboxylate symporter family 6 377 3.0E-78 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Clos_1246 e59107cecbb8f321feb6512260fbc29e 334 Gene3D G3DSA:3.40.50.300 110 316 2.1E-76 T 11-10-2018 Clos_1246 e59107cecbb8f321feb6512260fbc29e 334 SUPERFAMILY SSF52540 19 293 3.8E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_1246 e59107cecbb8f321feb6512260fbc29e 334 Pfam PF02562 PhoH-like protein 113 316 4.2E-96 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 Clos_1123 a26724ed22684e76c8428afece1fb547 334 Pfam PF03773 Predicted permease 40 327 7.8E-66 T 11-10-2018 IPR005524 Predicted permease DUF318 Clos_1091 2e2185a1a4ad5a657286cf66d07a5e05 270 Pfam PF01061 ABC-2 type transporter 16 231 3.1E-18 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Clos_0341 c0e66543706e11c55f96f87e9cd0c523 185 SUPERFAMILY SSF55729 9 181 2.34E-47 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0341 c0e66543706e11c55f96f87e9cd0c523 185 Gene3D G3DSA:3.40.630.30 11 178 1.1E-45 T 11-10-2018 Clos_0341 c0e66543706e11c55f96f87e9cd0c523 185 Pfam PF13302 Acetyltransferase (GNAT) domain 16 156 1.8E-30 T 11-10-2018 IPR000182 GNAT domain Clos_0202 e0645ab6bb37590906e9772f0ca00844 333 Gene3D G3DSA:3.40.50.2300 149 316 7.7E-61 T 11-10-2018 Clos_0202 e0645ab6bb37590906e9772f0ca00844 333 Gene3D G3DSA:3.40.50.2300 51 299 7.7E-61 T 11-10-2018 Clos_0202 e0645ab6bb37590906e9772f0ca00844 333 Pfam PF04392 ABC transporter substrate binding protein 41 318 7.6E-45 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein Clos_0202 e0645ab6bb37590906e9772f0ca00844 333 SUPERFAMILY SSF53822 32 289 2.16E-10 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Clos_2527 9b127d2758c0cab1d6841c6e22d1372b 54 Pfam PF12841 YvrJ protein family 7 41 6.4E-18 T 11-10-2018 IPR024419 Protein of unknown function YvrJ Clos_2209 4f50406e1369cfecc921d66e817a464a 243 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 2 234 1.6E-40 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Clos_2209 4f50406e1369cfecc921d66e817a464a 243 Pfam PF02654 Cobalamin-5-phosphate synthase 8 233 3.9E-51 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Clos_2209 4f50406e1369cfecc921d66e817a464a 243 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 243 35.823 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Clos_1632 d0cac85a0eb26e4419492bf6b3fed3c6 190 Pfam PF05137 Fimbrial assembly protein (PilN) 106 178 7.9E-9 T 11-10-2018 IPR007813 Fimbrial assembly PilN Clos_0100 d3110dd2b2382c7818123dad04bdd3e6 440 TIGRFAM TIGR03721 exospore_TM: BclB C-terminal domain 270 440 8.7E-44 T 11-10-2018 IPR021210 Exosporium BclB, C-terminal Clos_0100 d3110dd2b2382c7818123dad04bdd3e6 440 Pfam PF01391 Collagen triple helix repeat (20 copies) 34 83 4.3E-7 T 11-10-2018 IPR008160 Collagen triple helix repeat Clos_0100 d3110dd2b2382c7818123dad04bdd3e6 440 Pfam PF01391 Collagen triple helix repeat (20 copies) 213 270 7.1E-8 T 11-10-2018 IPR008160 Collagen triple helix repeat Clos_0100 d3110dd2b2382c7818123dad04bdd3e6 440 Pfam PF01391 Collagen triple helix repeat (20 copies) 84 142 2.0E-8 T 11-10-2018 IPR008160 Collagen triple helix repeat Clos_0904 957fe866de83d5051ce1bf33cbeac800 154 SUPERFAMILY SSF55729 10 141 1.93E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0904 957fe866de83d5051ce1bf33cbeac800 154 Pfam PF00583 Acetyltransferase (GNAT) family 45 131 6.3E-12 T 11-10-2018 IPR000182 GNAT domain Clos_0904 957fe866de83d5051ce1bf33cbeac800 154 Gene3D G3DSA:3.40.630.30 8 153 3.9E-18 T 11-10-2018 Clos_1766 1eecf336f73339904a3dee08a4d901f7 232 TIGRFAM TIGR00608 radc: DNA repair protein RadC 18 230 1.4E-73 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 Clos_1766 1eecf336f73339904a3dee08a4d901f7 232 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 181 186 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Clos_1766 1eecf336f73339904a3dee08a4d901f7 232 Pfam PF04002 RadC-like JAB domain 112 230 8.5E-45 T 11-10-2018 IPR025657 RadC-like JAB domain Clos_1766 1eecf336f73339904a3dee08a4d901f7 232 SUPERFAMILY SSF47781 24 98 2.22E-6 T 11-10-2018 IPR010994 RuvA domain 2-like Clos_1766 1eecf336f73339904a3dee08a4d901f7 232 Gene3D G3DSA:3.40.140.10 107 232 5.5E-47 T 11-10-2018 Clos_0752 b5d8e70f59cda5f1b75741e056d8e8a5 210 SUPERFAMILY SSF46689 6 75 9.22E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_0752 b5d8e70f59cda5f1b75741e056d8e8a5 210 Gene3D G3DSA:1.10.357.10 2 203 2.5E-54 T 11-10-2018 Clos_0752 b5d8e70f59cda5f1b75741e056d8e8a5 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0752 b5d8e70f59cda5f1b75741e056d8e8a5 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0752 b5d8e70f59cda5f1b75741e056d8e8a5 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Clos_0752 b5d8e70f59cda5f1b75741e056d8e8a5 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 8.2E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Clos_0111 69359c8daa26e1e3dc949302cb68e443 179 Gene3D G3DSA:3.40.630.30 1 165 1.3E-18 T 11-10-2018 Clos_0111 69359c8daa26e1e3dc949302cb68e443 179 SUPERFAMILY SSF55729 25 156 4.56E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0111 69359c8daa26e1e3dc949302cb68e443 179 Pfam PF13673 Acetyltransferase (GNAT) domain 62 157 1.5E-12 T 11-10-2018 IPR000182 GNAT domain Clos_0890 a647b707bd454e499befa27247ca3d3a 293 Gene3D G3DSA:3.30.70.120 202 278 8.4E-29 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Clos_0890 a647b707bd454e499befa27247ca3d3a 293 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 23 226 5.7E-63 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT Clos_0890 a647b707bd454e499befa27247ca3d3a 293 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 231 285 1.6E-23 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 Clos_0890 a647b707bd454e499befa27247ca3d3a 293 PIRSF PIRSF006483 1 293 8.8E-107 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT Clos_1995 12d5aa5bf03e5ef55937c9ab4cc61ca0 72 Pfam PF13783 Domain of unknown function (DUF4177) 2 65 2.0E-19 T 11-10-2018 IPR025234 Protein of unknown function DUF4177 Clos_0783 134c29c999e5a5a279b57b1487e9cfdd 360 Pfam PF03413 Peptidase propeptide and YPEB domain 294 353 5.6E-8 T 11-10-2018 IPR025711 PepSY domain Clos_0783 134c29c999e5a5a279b57b1487e9cfdd 360 Gene3D G3DSA:3.10.450.40 285 358 1.3E-11 T 11-10-2018 Clos_2453 8998adc39da424ff79e1c4e3acb93214 562 Pfam PF16949 Putative ATP-binding cassette 72 518 4.9E-19 T 11-10-2018 IPR031599 Putative ATP-binding cassette Clos_2816 af5e9ca2bfb45010a3c60c0a94d8db76 478 Gene3D G3DSA:3.20.20.370 251 472 2.0E-64 T 11-10-2018 Clos_2816 af5e9ca2bfb45010a3c60c0a94d8db76 478 Pfam PF01522 Polysaccharide deacetylase 281 401 3.6E-32 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Clos_2816 af5e9ca2bfb45010a3c60c0a94d8db76 478 Pfam PF07833 Copper amine oxidase N-terminal domain 95 156 7.6E-5 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Clos_2816 af5e9ca2bfb45010a3c60c0a94d8db76 478 SUPERFAMILY SSF88713 276 469 2.89E-59 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Clos_2567 79849b4685ed1e1996852489212565fc 135 Pfam PF03899 ATP synthase I chain 15 107 1.9E-13 T 11-10-2018 IPR005598 ATP synthase protein I Clos_0442 78c3c7a9b52fcf00be8d01e53f64e1fb 127 Pfam PF00364 Biotin-requiring enzyme 60 126 5.6E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Clos_0442 78c3c7a9b52fcf00be8d01e53f64e1fb 127 Gene3D G3DSA:2.40.50.100 50 127 7.8E-30 T 11-10-2018 Clos_0442 78c3c7a9b52fcf00be8d01e53f64e1fb 127 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 83 100 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Clos_0442 78c3c7a9b52fcf00be8d01e53f64e1fb 127 SUPERFAMILY SSF51230 49 126 4.84E-26 T 11-10-2018 IPR011053 Single hybrid motif Clos_1263 169fa159b38671331b7fd8fd59d66a9f 179 Pfam PF13302 Acetyltransferase (GNAT) domain 7 147 2.1E-25 T 11-10-2018 IPR000182 GNAT domain Clos_1263 169fa159b38671331b7fd8fd59d66a9f 179 SUPERFAMILY SSF55729 2 171 1.98E-44 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_1263 169fa159b38671331b7fd8fd59d66a9f 179 Gene3D G3DSA:3.40.630.30 2 178 1.8E-48 T 11-10-2018 Clos_1882 6e6292b6ec5bed7e2f2193b665febe8c 174 Pfam PF01478 Type IV leader peptidase family 42 141 1.2E-10 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Clos_1856 622ebd9696681d43fc6133a4bb55b7a7 282 Pfam PF09521 NgoPII restriction endonuclease 3 264 1.3E-122 T 11-10-2018 IPR019046 Restriction endonuclease, type II, NgoPII GO:0003677|GO:0009036|GO:0009307 Clos_2703 efd819291c2b8ee30d9c7ecb59b98a4c 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 268 2.2E-27 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Clos_2207 7d1aacd0c1c64556e8915238afb4ef74 167 Gene3D G3DSA:1.10.1760.20 8 167 1.1E-11 T 11-10-2018 Clos_2207 7d1aacd0c1c64556e8915238afb4ef74 167 Pfam PF12822 ECF transporter, substrate-specific component 15 164 6.1E-12 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Clos_2800 ae27945ab916445ca843b52e0d364b68 310 Pfam PF09991 Predicted membrane protein (DUF2232) 18 299 2.8E-64 T 11-10-2018 IPR018710 Protein of unknown function DUF2232 Clos_1098 e6e1bbdf27bda2ba874949dcbb3dc012 222 SUPERFAMILY SSF89155 10 205 2.22E-41 T 11-10-2018 IPR036411 TorD-like superfamily Clos_1098 e6e1bbdf27bda2ba874949dcbb3dc012 222 Gene3D G3DSA:1.10.3480.10 3 215 2.6E-48 T 11-10-2018 Clos_1098 e6e1bbdf27bda2ba874949dcbb3dc012 222 Pfam PF02613 Nitrate reductase delta subunit 52 177 7.2E-34 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Clos_1090 19cd6821cb759fea06619afe1f176b22 143 Pfam PF13411 MerR HTH family regulatory protein 5 70 3.1E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_1090 19cd6821cb759fea06619afe1f176b22 143 Gene3D G3DSA:1.10.1660.10 2 130 2.0E-35 T 11-10-2018 Clos_1090 19cd6821cb759fea06619afe1f176b22 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 6.8E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_1090 19cd6821cb759fea06619afe1f176b22 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 6.8E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_1090 19cd6821cb759fea06619afe1f176b22 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 6.8E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_1090 19cd6821cb759fea06619afe1f176b22 143 SMART SM00422 4 73 2.8E-32 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_1090 19cd6821cb759fea06619afe1f176b22 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Clos_1090 19cd6821cb759fea06619afe1f176b22 143 SUPERFAMILY SSF46955 4 120 4.4E-33 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Clos_2052 77976c6e39dd65c081b499019af2f442 391 Pfam PF07907 YibE/F-like protein 144 383 2.6E-80 T 11-10-2018 IPR012507 YibE/F-like Clos_1408 10671bc5d2589e88de7d65f634916e2b 146 Pfam PF04472 Cell division protein SepF 57 128 1.3E-28 T 11-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 Clos_1408 10671bc5d2589e88de7d65f634916e2b 146 Hamap MF_01197 Cell division protein SepF [sepF]. 3 136 19.665 T 11-10-2018 IPR023052 Cell division protein SepF GO:0090529 Clos_1408 10671bc5d2589e88de7d65f634916e2b 146 Gene3D G3DSA:3.30.110.150 51 144 9.6E-35 T 11-10-2018 IPR038594 SepF-like superfamily Clos_1172 57961a2f7fbd1bc4321eeec0bdee5bc8 345 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 340 2.8E-66 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 Clos_1889 cc6f9a8d2339481880efb78c53b98734 395 Pfam PF13271 Domain of unknown function (DUF4062) 12 97 2.2E-18 T 11-10-2018 IPR025139 Domain of unknown function DUF4062 Clos_1615 98ea6615f334e2ec645eba1794e1e703 246 Gene3D G3DSA:3.30.300.270 132 243 1.7E-26 T 11-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily Clos_1615 98ea6615f334e2ec645eba1794e1e703 246 Pfam PF12685 SpoIIIAH-like protein 8 242 1.1E-46 T 11-10-2018 IPR024232 Stage III sporulation protein AH-like Clos_1964 19f23baa7b6295c4445d8e3208a0cb0f 750 Pfam PF00395 S-layer homology domain 628 668 7.6E-6 T 11-10-2018 IPR001119 S-layer homology domain Clos_0102 6caf0316838f1b537a5f500e4bb3fddd 193 Pfam PF13508 Acetyltransferase (GNAT) domain 91 180 5.3E-8 T 11-10-2018 IPR000182 GNAT domain Clos_0102 6caf0316838f1b537a5f500e4bb3fddd 193 SUPERFAMILY SSF55729 92 189 5.41E-9 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0102 6caf0316838f1b537a5f500e4bb3fddd 193 Gene3D G3DSA:3.40.630.30 7 192 7.5E-11 T 11-10-2018 Clos_2739 e67a8898411e6d2029e6a5df7fd3832c 451 Pfam PF03553 Na+/H+ antiporter family 149 427 5.5E-34 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Clos_0391 57e26b16309e6ce5ffeb2aab8aede6ea 339 SUPERFAMILY SSF51395 1 337 7.05E-116 T 11-10-2018 Clos_0391 57e26b16309e6ce5ffeb2aab8aede6ea 339 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 325 8.3E-89 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Clos_0391 57e26b16309e6ce5ffeb2aab8aede6ea 339 Gene3D G3DSA:3.20.20.70 1 339 1.9E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Clos_2012 3501e795dfe0ee32d6bcd824a69d6422 178 Gene3D G3DSA:1.10.8.1150 108 178 1.9E-9 T 11-10-2018 Clos_1784 83e8c090fa9a83248c68db7ef7ec01cc 151 Gene3D G3DSA:3.90.79.10 6 131 3.9E-16 T 11-10-2018 Clos_1784 83e8c090fa9a83248c68db7ef7ec01cc 151 SUPERFAMILY SSF55811 2 130 8.4E-15 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Clos_1784 83e8c090fa9a83248c68db7ef7ec01cc 151 Pfam PF00293 NUDIX domain 9 116 2.3E-6 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Clos_1603 e45ef4764d500c00eefd3d273a463955 432 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 7 427 1.8E-147 T 11-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B Clos_1603 e45ef4764d500c00eefd3d273a463955 432 Pfam PF05580 SpoIVB peptidase S55 214 422 4.7E-88 T 11-10-2018 IPR008763 Peptidase S55, SpoIVB Clos_1603 e45ef4764d500c00eefd3d273a463955 432 SMART SM00228 122 197 5.1E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Clos_1603 e45ef4764d500c00eefd3d273a463955 432 Pfam PF13180 PDZ domain 148 204 1.5E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Clos_1603 e45ef4764d500c00eefd3d273a463955 432 Gene3D G3DSA:2.30.42.10 146 223 8.2E-16 T 11-10-2018 Clos_1603 e45ef4764d500c00eefd3d273a463955 432 SUPERFAMILY SSF50156 149 228 8.15E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Clos_2365 9001ded6fc9f4f5cc643979218b48dba 278 Pfam PF01578 Cytochrome C assembly protein 65 267 2.1E-56 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Clos_2365 9001ded6fc9f4f5cc643979218b48dba 278 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 43 270 1.3E-79 T 11-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 Clos_1617 8c8b966794a0865b4cb748e8332b74ea 210 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 203 2.5E-38 T 11-10-2018 IPR014245 Sporulation stage III, protein AF Clos_1617 8c8b966794a0865b4cb748e8332b74ea 210 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 3 106 4.9E-19 T 11-10-2018 IPR014245 Sporulation stage III, protein AF Clos_0571 23efbc19cb987f3aca3a2b8da3bef6a3 136 SUPERFAMILY SSF50800 54 135 1.0E-5 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Clos_0571 23efbc19cb987f3aca3a2b8da3bef6a3 136 Gene3D G3DSA:2.40.33.20 36 136 5.7E-6 T 11-10-2018 Clos_0417 6b6d515675d9e085f56695496798a38e 345 SUPERFAMILY SSF51735 181 313 1.4E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Clos_0417 6b6d515675d9e085f56695496798a38e 345 Pfam PF00107 Zinc-binding dehydrogenase 207 294 5.8E-10 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Clos_0417 6b6d515675d9e085f56695496798a38e 345 Gene3D G3DSA:3.90.180.10 30 344 4.2E-19 T 11-10-2018 Clos_0867 4e84ff1e99a18a233d69e7fd85889a21 410 Pfam PF00860 Permease family 23 380 6.9E-90 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Clos_0867 4e84ff1e99a18a233d69e7fd85889a21 410 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 20 405 1.2E-104 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Clos_2548 ae594e40162b2f0780ae8614a0759be0 120 PRINTS PR01002 Flagellar protein FlgJ signature 70 92 7.6E-5 T 11-10-2018 Clos_2548 ae594e40162b2f0780ae8614a0759be0 120 PRINTS PR01002 Flagellar protein FlgJ signature 23 46 7.6E-5 T 11-10-2018 Clos_2548 ae594e40162b2f0780ae8614a0759be0 120 Pfam PF10135 Rod binding protein 45 93 6.1E-11 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Clos_2500 d228af03478bfe575663a0bfab647d7a 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 316 1.6E-44 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Clos_0997 060aa4c3c3a7c725a067330a867a921b 129 Pfam PF10990 Protein of unknown function (DUF2809) 32 115 8.3E-29 T 11-10-2018 IPR021257 Protein of unknown function DUF2809 Clos_2353 2dc8ca3b858b891c7fedaebd19fba9f2 425 SUPERFAMILY SSF103473 16 416 4.84E-40 T 11-10-2018 IPR036259 MFS transporter superfamily Clos_2353 2dc8ca3b858b891c7fedaebd19fba9f2 425 Gene3D G3DSA:1.20.1250.20 11 417 6.1E-34 T 11-10-2018 Clos_2353 2dc8ca3b858b891c7fedaebd19fba9f2 425 Pfam PF07690 Major Facilitator Superfamily 25 378 2.0E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Clos_0190 a8a2da7a639e62d25dd3b4dd90825b5c 240 Pfam PF03591 AzlC protein 14 153 1.7E-43 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease Clos_2533 aa2f640011eea0ceeb16d469daf4e28c 182 Pfam PF10646 Sporulation and spore germination 53 166 1.2E-19 T 11-10-2018 IPR019606 GerMN domain Clos_2533 aa2f640011eea0ceeb16d469daf4e28c 182 SMART SM00909 87 171 1.9E-21 T 11-10-2018 IPR019606 GerMN domain Clos_2606 9e319617aeac2420377e716a20fc6dc3 393 Pfam PF13205 Bacterial Ig-like domain 54 129 7.6E-7 T 11-10-2018 IPR032812 SbsA, Ig-like domain Clos_2606 9e319617aeac2420377e716a20fc6dc3 393 Gene3D G3DSA:2.60.40.1220 152 241 3.4E-5 T 11-10-2018 Clos_2613 87d2261690e735954b8708d84867e66f 332 SUPERFAMILY SSF55383 31 82 3.66E-9 T 11-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Clos_2613 87d2261690e735954b8708d84867e66f 332 Pfam PF07833 Copper amine oxidase N-terminal domain 31 88 3.5E-9 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Clos_2613 87d2261690e735954b8708d84867e66f 332 Pfam PF07833 Copper amine oxidase N-terminal domain 60 142 6.1E-9 T 11-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Clos_0576 0ff55934b3344dda48b4c3c7aa133449 421 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 21 405 3.5E-110 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Clos_0576 0ff55934b3344dda48b4c3c7aa133449 421 Pfam PF00860 Permease family 24 379 2.8E-96 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Clos_0576 0ff55934b3344dda48b4c3c7aa133449 421 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 325 345 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Clos_1600 bf535c40b34a83371b9f3be73b6506ef 373 SUPERFAMILY SSF63999 164 321 2.88E-27 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Clos_1600 bf535c40b34a83371b9f3be73b6506ef 373 Gene3D G3DSA:3.40.50.10240 160 240 1.4E-11 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Clos_1600 bf535c40b34a83371b9f3be73b6506ef 373 Pfam PF12555 Thiamine pyrophosphokinase C terminal 320 370 7.3E-16 T 11-10-2018 IPR022215 Thiamine pyrophosphokinase C-terminal Clos_0893 36d434ed512362714c66d9c02191d8de 197 Pfam PF12801 4Fe-4S binding domain 154 187 0.018 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_0893 36d434ed512362714c66d9c02191d8de 197 Pfam PF12801 4Fe-4S binding domain 29 71 2.5E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Clos_1409 fd42fb94f074465f5f2d7dcb861ffc4f 90 Pfam PF02325 YGGT family 12 85 1.1E-19 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 Clos_0935 48f1de344f3591c508a3ae4fc95a860b 410 SUPERFAMILY SSF50182 185 250 2.06E-11 T 11-10-2018 IPR010920 LSM domain superfamily Clos_0935 48f1de344f3591c508a3ae4fc95a860b 410 Pfam PF00924 Mechanosensitive ion channel 140 395 3.5E-45 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Clos_1072 394f23911c5035eb6c16322d783eb0c0 233 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 23 221 1.1E-23 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Clos_1729 6976f3caa8a6edca191dc0923e65e923 213 Pfam PF08955 BofC C-terminal domain 151 212 5.5E-5 T 11-10-2018 IPR015050 Bypass of forespore C, C-terminal Clos_1051 e6d35122431a2901a263f5ab41385922 98 Pfam PF12728 Helix-turn-helix domain 42 91 4.6E-13 T 11-10-2018 Clos_1051 e6d35122431a2901a263f5ab41385922 98 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 43 90 8.6E-9 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Clos_1961 5893bf541b1ef14758d83a7c88fb4197 89 Pfam PF11823 Protein of unknown function (DUF3343) 5 72 1.8E-23 T 11-10-2018 IPR021778 Domain of unknown function DUF3343 Clos_2626 2449442d7621f053b438ad4eee8dc7ef 694 Gene3D G3DSA:2.60.40.1220 505 595 6.0E-5 T 11-10-2018 Clos_2626 2449442d7621f053b438ad4eee8dc7ef 694 Gene3D G3DSA:2.60.40.1220 110 203 7.7E-8 T 11-10-2018 Clos_1227 347518b15aa718e0317eb11b271d60f8 427 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 222 422 2.2E-50 T 11-10-2018 IPR010897 Sporulation stage II, protein P Clos_1227 347518b15aa718e0317eb11b271d60f8 427 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 103 419 2.4E-75 T 11-10-2018 IPR010897 Sporulation stage II, protein P Clos_0342 d6f7db9eec75f28b968e91c27922e8ac 163 Gene3D G3DSA:3.40.50.850 3 154 4.9E-27 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Clos_0342 d6f7db9eec75f28b968e91c27922e8ac 163 SUPERFAMILY SSF52499 5 142 3.27E-26 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Clos_0342 d6f7db9eec75f28b968e91c27922e8ac 163 Pfam PF00857 Isochorismatase family 5 140 3.8E-20 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 Clos_1133 b4ad7040cd94ff28ac798d697b76774c 162 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 152 5.3E-30 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Clos_1687 90d8313cdd8e049892b67692d9c9af17 164 Gene3D G3DSA:1.10.1760.20 1 161 5.8E-7 T 11-10-2018 Clos_0560 e8c4efa5c6e73ae455b2197f0c4ef868 81 Pfam PF04226 Transglycosylase associated protein 33 81 1.6E-14 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 Clos_1835 4b16d6906f18c76af423fb769ab68841 151 Pfam PF04463 Protein of unknown function (DUF523) 2 146 2.7E-43 T 11-10-2018 IPR007553 Domain of unknown function DUF523 Clos_0235 3d00d5607efdb2a9b3851278241c69ae 199 SMART SM00793 2 197 9.7E-20 T 11-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Clos_0235 3d00d5607efdb2a9b3851278241c69ae 199 Pfam PF04647 Accessory gene regulator B 5 187 7.9E-42 T 11-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Clos_2588 1e4793b727a22a12e9f1b85063cfc81e 255 Pfam PF04018 Domain of unknown function (DUF368) 11 224 2.0E-32 T 11-10-2018 IPR007163 Protein of unknown function DUF368 Clos_0951 317ac860f6ce0ce7218604c79b43c353 156 PIRSF PIRSF029256 1 156 2.6E-62 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Clos_0951 317ac860f6ce0ce7218604c79b43c353 156 Gene3D G3DSA:3.40.1280.10 1 156 2.7E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Clos_0951 317ac860f6ce0ce7218604c79b43c353 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 2 155 2.8E-60 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Clos_0951 317ac860f6ce0ce7218604c79b43c353 156 SUPERFAMILY SSF75217 2 155 1.83E-40 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Clos_0951 317ac860f6ce0ce7218604c79b43c353 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 34.603 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Clos_0951 317ac860f6ce0ce7218604c79b43c353 156 Pfam PF00588 SpoU rRNA Methylase family 2 144 7.6E-35 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Clos_1793 c2564a73d9c31f4cbbf41e2e0f4791f2 202 Pfam PF12164 Stage V sporulation protein AA 5 89 1.8E-14 T 11-10-2018 IPR021997 Stage V sporulation protein AA Clos_1793 c2564a73d9c31f4cbbf41e2e0f4791f2 202 Gene3D G3DSA:2.60.480.10 2 97 2.2E-10 T 11-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily Clos_1616 de3c8d3785c38db2340a9237243e1004 196 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 22 195 3.0E-45 T 11-10-2018 IPR014195 Sporulation stage III, protein AG Clos_1177 86c674070fca07423e4b6a00ee04edc6 515 PIRSF PIRSF038958 1 512 9.4E-108 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Clos_1177 86c674070fca07423e4b6a00ee04edc6 515 Pfam PF01943 Polysaccharide biosynthesis protein 9 306 8.0E-31 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Clos_1177 86c674070fca07423e4b6a00ee04edc6 515 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 358 501 3.0E-22 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Clos_1418 af4c8eed27001f38d57432a95b1b4ff2 176 Gene3D G3DSA:3.40.50.2020 1 176 1.4E-59 T 11-10-2018 Clos_1418 af4c8eed27001f38d57432a95b1b4ff2 176 Pfam PF00156 Phosphoribosyl transferase domain 6 160 4.8E-24 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Clos_1418 af4c8eed27001f38d57432a95b1b4ff2 176 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 176 37.049 T 11-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Clos_1418 af4c8eed27001f38d57432a95b1b4ff2 176 SUPERFAMILY SSF53271 7 170 6.56E-45 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_0922 a9c0d05f1be4bfb6d7972b4b79dfd602 432 Pfam PF03553 Na+/H+ antiporter family 42 177 5.3E-7 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Clos_0166 53b9eb9c9102a775a60ef5474a1dda30 434 Pfam PF02447 GntP family permease 3 246 2.0E-11 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Clos_0135 787f0a58f5768e21b3fe8d53f9cbe6f7 259 Pfam PF06161 Protein of unknown function (DUF975) 152 240 1.6E-25 T 11-10-2018 IPR010380 Protein of unknown function DUF975 Clos_0126 c1ae6bae0b52736357af8a6fcb5b8ff0 226 Gene3D G3DSA:1.10.3720.10 15 226 5.6E-44 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0126 c1ae6bae0b52736357af8a6fcb5b8ff0 226 SUPERFAMILY SSF161098 17 211 6.8E-42 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0126 c1ae6bae0b52736357af8a6fcb5b8ff0 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 220 1.1E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_0718 869003e91fb24db90637ec55c54eaecb 229 SUPERFAMILY SSF56300 3 202 1.03E-30 T 11-10-2018 Clos_0718 869003e91fb24db90637ec55c54eaecb 229 PIRSF PIRSF033094 1 229 3.7E-98 T 11-10-2018 IPR014578 Predicted phosphoesterase, CT488 type Clos_0718 869003e91fb24db90637ec55c54eaecb 229 Pfam PF00149 Calcineurin-like phosphoesterase 3 195 3.5E-17 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Clos_2152 bc57e32419ff103032ff730d066f6aa9 326 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 4 217 3.1E-57 T 11-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Clos_2152 bc57e32419ff103032ff730d066f6aa9 326 Gene3D G3DSA:3.40.50.11900 214 321 5.5E-9 T 11-10-2018 Clos_2090 3ef5c4664b79b8fdc11c03aac6a80f04 170 Pfam PF00210 Ferritin-like domain 8 144 1.6E-39 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Clos_2090 3ef5c4664b79b8fdc11c03aac6a80f04 170 Gene3D G3DSA:1.20.1260.10 1 170 1.5E-50 T 11-10-2018 IPR012347 Ferritin-like Clos_2090 3ef5c4664b79b8fdc11c03aac6a80f04 170 SUPERFAMILY SSF47240 1 161 6.37E-55 T 11-10-2018 IPR009078 Ferritin-like superfamily Clos_2217 f3c50ec95ae9be390539c4d4dec1a1d9 370 Pfam PF04346 Ethanolamine utilisation protein, EutH 1 350 2.5E-128 T 11-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 Clos_2217 f3c50ec95ae9be390539c4d4dec1a1d9 370 PIRSF PIRSF019466 1 368 2.5E-155 T 11-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 Clos_2529 a293906ab934617a2a64458eae8ebd31 73 Pfam PF07872 Protein of unknown function (DUF1659) 8 49 5.7E-15 T 11-10-2018 IPR012454 Protein of unknown function DUF1659 Clos_2672 e55a645c096583e7bf282e9116763669 345 Pfam PF12791 Anti-sigma factor N-terminus 8 62 2.2E-12 T 11-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal Clos_1791 e6403b926a9e3352d40fc6fbaa9e1a62 151 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 11 149 2.2E-56 T 11-10-2018 IPR014203 Sporulation stage V, protein AC Clos_1791 e6403b926a9e3352d40fc6fbaa9e1a62 151 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 28 144 6.2E-39 T 11-10-2018 IPR005562 SpoVA Clos_2803 9d63a3f3da28335c5cfb860cd44d3417 100 Pfam PF10704 Protein of unknown function (DUF2508) 35 96 6.2E-13 T 11-10-2018 IPR019644 Protein of unknown function DUF2508 Clos_2006 397de311e353a62671705c31ac9598d1 248 SUPERFAMILY SSF53335 4 246 7.55E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Clos_2006 397de311e353a62671705c31ac9598d1 248 Gene3D G3DSA:2.20.25.110 145 206 1.1E-80 T 11-10-2018 Clos_2006 397de311e353a62671705c31ac9598d1 248 Gene3D G3DSA:3.40.50.150 5 224 1.1E-80 T 11-10-2018 Clos_2006 397de311e353a62671705c31ac9598d1 248 Pfam PF13649 Methyltransferase domain 42 137 1.4E-21 T 11-10-2018 Clos_1538 b625899d2666a02ce4354b3f58bb06ed 245 SUPERFAMILY SSF52096 42 236 1.44E-40 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Clos_1538 b625899d2666a02ce4354b3f58bb06ed 245 PRINTS PR00127 Clp protease catalytic subunit P signature 93 113 1.7E-6 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_1538 b625899d2666a02ce4354b3f58bb06ed 245 PRINTS PR00127 Clp protease catalytic subunit P signature 124 141 1.7E-6 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_1538 b625899d2666a02ce4354b3f58bb06ed 245 PRINTS PR00127 Clp protease catalytic subunit P signature 206 225 1.7E-6 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Clos_1538 b625899d2666a02ce4354b3f58bb06ed 245 Gene3D G3DSA:3.90.226.10 47 231 4.9E-33 T 11-10-2018 Clos_1538 b625899d2666a02ce4354b3f58bb06ed 245 Pfam PF00574 Clp protease 54 228 4.9E-29 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Clos_2458 24f70466297e4145fac91e652d380dee 420 Gene3D G3DSA:1.10.4160.10 12 419 9.5E-38 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily Clos_2458 24f70466297e4145fac91e652d380dee 420 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 21 385 1.4E-41 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Clos_2015 07d01308934f530652aa10dfffa30e14 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 10 174 5.3E-62 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Clos_2015 07d01308934f530652aa10dfffa30e14 179 SUPERFAMILY SSF53271 2 176 1.44E-55 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Clos_2015 07d01308934f530652aa10dfffa30e14 179 Gene3D G3DSA:3.40.50.2020 1 179 2.9E-67 T 11-10-2018 Clos_2015 07d01308934f530652aa10dfffa30e14 179 Pfam PF00156 Phosphoribosyl transferase domain 16 160 7.5E-28 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Clos_1065 9f360ba5ad2c60c8f9e25e819a8358b4 100 Gene3D G3DSA:1.20.58.1000 2 100 2.4E-28 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Clos_1065 9f360ba5ad2c60c8f9e25e819a8358b4 100 Pfam PF02583 Metal-sensitive transcriptional repressor 19 97 8.1E-26 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Clos_0063 f5d6bb99595e93d5f5d80d43581ca6bc 294 Pfam PF04468 PSP1 C-terminal conserved region 61 146 9.9E-34 T 11-10-2018 IPR007557 PSP1, C-terminal Clos_1966 b5d9e7639c91a84fea7d3611e790f600 462 Pfam PF01554 MatE 247 401 7.1E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_1966 b5d9e7639c91a84fea7d3611e790f600 462 Pfam PF01554 MatE 22 183 1.7E-30 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_1966 b5d9e7639c91a84fea7d3611e790f600 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 418 4.8E-63 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_1966 b5d9e7639c91a84fea7d3611e790f600 462 PIRSF PIRSF006603 1 449 2.1E-98 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Clos_0193 665245460bdb70a538eadb295d7dae70 346 Pfam PF00395 S-layer homology domain 261 301 5.3E-9 T 11-10-2018 IPR001119 S-layer homology domain Clos_0193 665245460bdb70a538eadb295d7dae70 346 Pfam PF00395 S-layer homology domain 202 243 3.7E-8 T 11-10-2018 IPR001119 S-layer homology domain Clos_0608 d6e76cdde7fbc7fdbfa058cc6477ff2b 1009 Pfam PF13799 Domain of unknown function (DUF4183) 13 84 4.0E-22 T 11-10-2018 IPR025237 Domain of unknown function DUF4183 Clos_0608 d6e76cdde7fbc7fdbfa058cc6477ff2b 1009 Pfam PF13799 Domain of unknown function (DUF4183) 940 1004 5.6E-10 T 11-10-2018 IPR025237 Domain of unknown function DUF4183 Clos_0608 d6e76cdde7fbc7fdbfa058cc6477ff2b 1009 Pfam PF13799 Domain of unknown function (DUF4183) 843 914 8.8E-23 T 11-10-2018 IPR025237 Domain of unknown function DUF4183 Clos_0757 73fff05b0885c06087696f041624e669 156 Pfam PF12682 Flavodoxin 4 153 1.3E-16 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Clos_0757 73fff05b0885c06087696f041624e669 156 Gene3D G3DSA:3.40.50.360 1 155 9.0E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_0757 73fff05b0885c06087696f041624e669 156 SUPERFAMILY SSF52218 3 130 2.1E-16 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Clos_0761 ebedb8aedf6e6d65e601764fd4fd2c47 706 SUPERFAMILY SSF52540 159 468 6.04E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Clos_2220 252a863348443dca98d8eafdd0b1f57c 220 Pfam PF12672 Protein of unknown function (DUF3793) 47 211 5.3E-37 T 11-10-2018 IPR024523 Protein of unknown function DUF3793 Clos_2780 cbb49f2317e1198ae6970c3046d6d525 299 Pfam PF09648 YycH protein 33 297 2.4E-59 T 11-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 Clos_0709 3bb8e6540bccb92fdbb79c8ca93416e4 203 Pfam PF13346 ABC-2 family transporter protein 2 197 9.9E-22 T 11-10-2018 IPR025699 ABC-2 membrane transporter-like Clos_2265 66e19897c31d379b781626431c13deb4 152 Pfam PF14343 PrcB C-terminal 75 136 3.0E-16 T 11-10-2018 IPR025748 PrcB C-terminal domain Clos_2320 d9f45e6f0d2f5ff14ce3fc4f0de243de 286 SUPERFAMILY SSF103481 38 137 4.45E-11 T 11-10-2018 Clos_2320 d9f45e6f0d2f5ff14ce3fc4f0de243de 286 SUPERFAMILY SSF103481 191 285 7.06E-11 T 11-10-2018 Clos_2320 d9f45e6f0d2f5ff14ce3fc4f0de243de 286 Pfam PF00892 EamA-like transporter family 4 135 4.8E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_2320 d9f45e6f0d2f5ff14ce3fc4f0de243de 286 Pfam PF00892 EamA-like transporter family 151 284 9.4E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Clos_0630 d51d9143db920f00ec89d91a15fb47fc 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 321 1.8E-17 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Clos_1025 e3f8a42044ff7e48b56ffe968d6f7b54 176 Pfam PF02417 Chromate transporter 6 169 7.3E-44 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Clos_2801 cf910a20c74a242edf701c35dc57787c 109 Pfam PF12643 MazG-like family 11 97 1.2E-28 T 11-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 Clos_1445 31b3485d4a990803c64eb3ec0f73edee 414 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 7 366 4.4E-97 T 11-10-2018 IPR014226 Sporulation integral membrane protein YlbJ Clos_0226 003a829edaac2bdc9a03267e20b2e000 244 SUPERFAMILY SSF49785 106 235 2.04E-7 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Clos_0226 003a829edaac2bdc9a03267e20b2e000 244 Pfam PF08305 NPCBM/NEW2 domain 105 230 3.1E-9 T 11-10-2018 IPR013222 Glycosyl hydrolase family 98, putative carbohydrate-binding module Clos_1780 0bc1d15b38a037695ce2554c54f947f6 120 Pfam PF01925 Sulfite exporter TauE/SafE 9 118 1.3E-22 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Clos_2528 6b1f78389fa2ace91c18ec5a3a738759 71 Pfam PF11148 Protein of unknown function (DUF2922) 2 68 1.0E-21 T 11-10-2018 IPR021321 Protein of unknown function DUF2922 Clos_0087 a6721e9cc663eda0f128dd2fe47472cc 438 Pfam PF02447 GntP family permease 2 190 1.3E-8 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Clos_2720 b072e987f70437de589300d2fafd764f 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 358 3.7E-75 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Clos_2720 b072e987f70437de589300d2fafd764f 366 Pfam PF03845 Spore germination protein 6 316 3.2E-52 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Clos_0900 6d3670a9ab9fd737b63ac5751acbbbd3 84 PIRSF PIRSF010606 1 82 1.6E-28 T 11-10-2018 IPR016571 Spore coat assembly protein CotJB Clos_0900 6d3670a9ab9fd737b63ac5751acbbbd3 84 Pfam PF12652 CotJB protein 6 81 1.8E-27 T 11-10-2018 IPR024207 Spore coat assembly protein CotJB, domain Clos_1621 a8be7e57a7c62d91d8860030d8c56608 173 PIRSF PIRSF021435 2 173 3.8E-41 T 11-10-2018 IPR014198 Stage III sporulation protein AB Clos_1621 a8be7e57a7c62d91d8860030d8c56608 173 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 4 173 4.1E-44 T 11-10-2018 IPR014198 Stage III sporulation protein AB Clos_1621 a8be7e57a7c62d91d8860030d8c56608 173 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 4 173 5.2E-47 T 11-10-2018 IPR014198 Stage III sporulation protein AB Clos_0003 9adcf741e64049125b685a0f2d5cbbbc 71 Pfam PF13275 S4 domain 7 70 4.4E-23 T 11-10-2018 Clos_0003 9adcf741e64049125b685a0f2d5cbbbc 71 Gene3D G3DSA:3.10.290.10 1 70 9.1E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Clos_0003 9adcf741e64049125b685a0f2d5cbbbc 71 SUPERFAMILY SSF55174 5 70 2.88E-17 T 11-10-2018 Clos_1134 ab6101dc405a075294fb460ae7a04a1e 428 PIRSF PIRSF006066 1 428 1.2E-133 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Clos_1134 ab6101dc405a075294fb460ae7a04a1e 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 418 2.4E-114 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Clos_1134 ab6101dc405a075294fb460ae7a04a1e 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 422 4.8E-121 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Clos_0635 c78dbacb9ae7c7e1b63858b54d1587f7 448 Pfam PF02667 Short chain fatty acid transporter 1 448 5.3E-164 T 11-10-2018 IPR006160 Short chain fatty acid transporter AtoE Clos_1518 501ff6b148e116ca5ccc85a920fda79e 262 Pfam PF01148 Cytidylyltransferase family 3 257 5.4E-56 T 11-10-2018 Clos_0118 5c220c3cacbed28dbf725c6930996696 176 SUPERFAMILY SSF55729 42 159 6.8E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_0118 5c220c3cacbed28dbf725c6930996696 176 Pfam PF13302 Acetyltransferase (GNAT) domain 37 151 1.6E-11 T 11-10-2018 IPR000182 GNAT domain Clos_0118 5c220c3cacbed28dbf725c6930996696 176 Gene3D G3DSA:3.40.630.30 33 154 2.1E-22 T 11-10-2018 Clos_2350 daaf799be0f8d5ba55c8d7c5d15a4cd0 201 Pfam PF04892 VanZ like family 51 185 6.1E-25 T 11-10-2018 IPR006976 VanZ-like Clos_0050 c7a71250c7a700b056306ae5539002a9 196 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 186 7.6E-40 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Clos_0050 c7a71250c7a700b056306ae5539002a9 196 SUPERFAMILY SSF53323 1 189 1.06E-42 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_0050 c7a71250c7a700b056306ae5539002a9 196 Gene3D G3DSA:3.40.920.10 2 191 1.0E-50 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Clos_0356 044d72662c49d8beda80ccf7b02bb8ea 192 Pfam PF14091 Domain of unknown function (DUF4269) 24 173 1.5E-55 T 11-10-2018 IPR025365 Protein of unknown function DUF4269 Clos_0697 2dde8e22e4119ae62e78d1cf5e37ad51 542 Pfam PF14266 Putative component of 'biosynthetic module' 45 520 1.0E-161 T 11-10-2018 IPR025647 Putative component of 'biosynthetic module' Clos_0656 242e0d0b7f41a8a84624f557949ce43f 494 Pfam PF07556 Protein of unknown function (DUF1538) 18 227 5.1E-68 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 Clos_0656 242e0d0b7f41a8a84624f557949ce43f 494 Pfam PF07556 Protein of unknown function (DUF1538) 272 481 4.9E-69 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 Clos_1982 59da692267dfe0d2e0eed62af1e539cb 303 Pfam PF08812 YtxC-like family 70 286 2.3E-67 T 11-10-2018 IPR014199 Sporulation protein YtxC Clos_1492 c7ac864d6a78b4e816a46c00bd3166cf 141 Pfam PF03748 Flagellar basal body-associated protein FliL 48 141 8.1E-19 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Clos_2628 1e556605345734543bb90a9e754c3ae2 187 Pfam PF00395 S-layer homology domain 82 124 2.3E-15 T 11-10-2018 IPR001119 S-layer homology domain Clos_2628 1e556605345734543bb90a9e754c3ae2 187 Pfam PF00395 S-layer homology domain 35 61 2.1E-7 T 11-10-2018 IPR001119 S-layer homology domain Clos_2628 1e556605345734543bb90a9e754c3ae2 187 Pfam PF00395 S-layer homology domain 136 173 8.7E-5 T 11-10-2018 IPR001119 S-layer homology domain Clos_1832 ed64d8211324bdbb91cb5d350fff469f 200 Pfam PF00882 Zinc dependent phospholipase C 5 160 1.0E-22 T 11-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 Clos_0144 39541fc460b0349446d8e2f994e312db 378 Pfam PF07907 YibE/F-like protein 126 363 8.1E-73 T 11-10-2018 IPR012507 YibE/F-like Clos_1820 632b819c412a5b7cdfb6379fe1f685e0 191 Pfam PF10881 Protein of unknown function (DUF2726) 61 181 4.0E-30 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 Clos_1820 632b819c412a5b7cdfb6379fe1f685e0 191 PIRSF PIRSF028063 48 189 4.4E-17 T 11-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger Clos_1820 632b819c412a5b7cdfb6379fe1f685e0 191 PIRSF PIRSF028063 1 36 560.0 T 11-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger Clos_2433 16af16ec9aaf4bce0a238364847f9db8 177 Gene3D G3DSA:1.20.144.10 90 177 7.4E-21 T 11-10-2018 Clos_2433 16af16ec9aaf4bce0a238364847f9db8 177 Gene3D G3DSA:1.20.144.10 5 89 2.0E-8 T 11-10-2018 Clos_2433 16af16ec9aaf4bce0a238364847f9db8 177 SUPERFAMILY SSF48317 5 172 3.79E-42 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Clos_2433 16af16ec9aaf4bce0a238364847f9db8 177 Pfam PF01569 PAP2 superfamily 61 169 2.3E-27 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Clos_2433 16af16ec9aaf4bce0a238364847f9db8 177 SMART SM00014 56 167 7.9E-26 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Clos_0710 5227142c8c9c99f66755fca19dce188f 178 Pfam PF07155 ECF-type riboflavin transporter, S component 9 168 1.4E-44 T 11-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 Clos_0710 5227142c8c9c99f66755fca19dce188f 178 Gene3D G3DSA:1.10.1760.20 8 172 2.3E-47 T 11-10-2018 Clos_1659 47484cdef3c43ac263eae41771e9225e 100 Pfam PF03956 Lysine exporter LysO 8 84 1.6E-5 T 11-10-2018 IPR005642 Lysine exporter LysO Clos_0098 e3e2f16329b90c202d6866032dac17eb 109 Pfam PF01391 Collagen triple helix repeat (20 copies) 60 108 3.8E-9 T 11-10-2018 IPR008160 Collagen triple helix repeat Clos_2632 bbb734241fd3b600ea234664dc35e5f9 100 Pfam PF04977 Septum formation initiator 19 94 1.1E-12 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Clos_1386 c8e0f87a0823a1d0d29a2b64acbaa4d3 296 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 1 296 1.8E-76 T 11-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 Clos_1386 c8e0f87a0823a1d0d29a2b64acbaa4d3 296 PIRSF PIRSF018571 1 296 1.4E-101 T 11-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 Clos_1386 c8e0f87a0823a1d0d29a2b64acbaa4d3 296 Pfam PF03419 Sporulation factor SpoIIGA 3 295 1.5E-90 T 11-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 Clos_2601 3bfbff1a9fb9035e339835f898ddf49a 617 Pfam PF00395 S-layer homology domain 31 70 4.1E-11 T 11-10-2018 IPR001119 S-layer homology domain Clos_1205 61eecaaf510873dc923b8c80df22af04 229 Gene3D G3DSA:1.10.10.1320 4 60 1.5E-7 T 11-10-2018 Clos_1205 61eecaaf510873dc923b8c80df22af04 229 Pfam PF13490 Putative zinc-finger 3 37 2.0E-9 T 11-10-2018 IPR027383 Putative zinc-finger Clos_1008 2dbc07c915b6d504af741b6dc5f3b5d3 365 Pfam PF12725 Protein of unknown function (DUF3810) 41 356 1.6E-98 T 11-10-2018 IPR024294 Protein of unknown function DUF3810 Clos_1254 1ebeb9ec9fc23b0281fe682560fc4618 180 Gene3D G3DSA:1.10.8.10 2 40 6.5E-10 T 11-10-2018 Clos_1254 1ebeb9ec9fc23b0281fe682560fc4618 180 Pfam PF14242 Domain of unknown function (DUF4342) 46 121 2.1E-25 T 11-10-2018 IPR025642 Domain of unknown function DUF4342 Clos_1254 1ebeb9ec9fc23b0281fe682560fc4618 180 SUPERFAMILY SSF46934 1 48 1.02E-11 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 Clos_2857 82f04118fb0c3b03aee3d8241d8e98fa 375 SUPERFAMILY SSF63829 152 347 2.81E-10 T 11-10-2018 Clos_0032 9dbfb95c2e7bc0bac87ce87ddcea9163 156 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 5 99 1.9E-12 T 11-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 Clos_0765 c780ff0a65b14f796f390bca8c25576b 303 Pfam PF14133 Domain of unknown function (DUF4300) 37 288 1.1E-107 T 11-10-2018 IPR025389 Protein of unknown function DUF4300 Clos_2151 9e11464bf98e4505db49d2ef33823f42 369 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 8 70 3.9E-7 T 11-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Clos_2369 0287a1650cc53f5c0062930700d90c56 384 Pfam PF04235 Protein of unknown function (DUF418) 220 377 2.6E-42 T 11-10-2018 IPR007349 Domain of unknown function DUF418 Clos_1758 c977259603f2cb672b3b60347f6d2665 229 SUPERFAMILY SSF51261 30 222 1.15E-23 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_1758 c977259603f2cb672b3b60347f6d2665 229 Pfam PF01551 Peptidase family M23 132 202 1.7E-16 T 11-10-2018 IPR016047 Peptidase M23 Clos_1758 c977259603f2cb672b3b60347f6d2665 229 Gene3D G3DSA:2.70.70.10 92 223 1.9E-22 T 11-10-2018 IPR011055 Duplicated hybrid motif Clos_1396 6a06d698bef188eb5f269bd8dd584d61 88 Pfam PF11385 Protein of unknown function (DUF3189) 2 84 3.0E-7 T 11-10-2018 IPR021525 Protein of unknown function DUF3189 Clos_1395 0fa3951bc475405016d40d7a2af8dfc6 400 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 126 309 7.3E-52 T 11-10-2018 IPR010897 Sporulation stage II, protein P Clos_1395 0fa3951bc475405016d40d7a2af8dfc6 400 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 78 306 8.5E-57 T 11-10-2018 IPR010897 Sporulation stage II, protein P Clos_2501 4812c6c3b7bd1253248bb5c5eb279be6 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 275 9.4E-49 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Clos_1802 a8fb556a21103e5439104a315b173a47 260 Pfam PF11518 Protein of unknown function (DUF3221) 12 103 1.7E-7 T 11-10-2018 IPR021598 Protein of unknown function DUF3221 Clos_2627 0683d381cc027fab2d6c4ccbfed5967c 929 Pfam PF00395 S-layer homology domain 100 134 1.5E-7 T 11-10-2018 IPR001119 S-layer homology domain Clos_2627 0683d381cc027fab2d6c4ccbfed5967c 929 Pfam PF00395 S-layer homology domain 42 67 2.9E-5 T 11-10-2018 IPR001119 S-layer homology domain Clos_1642 cc7de609d4b4062c97d0f515592ecfa1 102 Pfam PF07875 Coat F domain 16 78 1.3E-14 T 11-10-2018 IPR012851 Spore coat protein CotF-like Clos_2351 336e908cffa1306b0f8d564f42ed7cf8 466 Pfam PF01098 Cell cycle protein 93 451 2.3E-37 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_1757 9e85c7b904fb65cd688c4e04c3445124 293 Pfam PF02163 Peptidase family M50 33 104 3.1E-7 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Clos_0609 71f960dcbf0b469efde0b1e3bdd4cd22 126 Pfam PF13799 Domain of unknown function (DUF4183) 36 110 5.2E-24 T 11-10-2018 IPR025237 Domain of unknown function DUF4183 Clos_0271 914a3e0250b117a614b9ec21750031cf 196 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 5 181 1.5E-13 T 11-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 Clos_0271 914a3e0250b117a614b9ec21750031cf 196 Gene3D G3DSA:3.40.50.1000 1 156 1.4E-9 T 11-10-2018 IPR023214 HAD superfamily Clos_0271 914a3e0250b117a614b9ec21750031cf 196 PIRSF PIRSF021362 2 190 1.6E-57 T 11-10-2018 IPR009206 Nucleotidase, putative Clos_0271 914a3e0250b117a614b9ec21750031cf 196 SUPERFAMILY SSF56784 5 161 2.02E-16 T 11-10-2018 IPR036412 HAD-like superfamily Clos_0926 e5c29c8781745757412c82673c1c665f 108 Pfam PF12986 Domain of unknown function (DUF3870) 8 101 3.0E-35 T 11-10-2018 IPR024617 Domain of unknown function DUF3870 Clos_0184 7146a2dfabbbaa40e240abe46de503c5 226 SUPERFAMILY SSF161098 12 208 8.9E-49 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0184 7146a2dfabbbaa40e240abe46de503c5 226 Gene3D G3DSA:1.10.3720.10 1 225 5.0E-62 T 11-10-2018 IPR035906 MetI-like superfamily Clos_0184 7146a2dfabbbaa40e240abe46de503c5 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 117 9.4E-27 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Clos_0184 7146a2dfabbbaa40e240abe46de503c5 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 223 3.4E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Clos_2584 e23224f5f04a8bbead28f1741554d59c 444 Pfam PF12698 ABC-2 family transporter protein 20 434 6.0E-26 T 11-10-2018 Clos_2517 e2a5b20ab62d669d0944452b04fa278e 605 Pfam PF01973 Protein of unknown function DUF115 203 373 2.0E-43 T 11-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like Clos_1921 7b2263b3bd45484d249df8f32b65ec03 255 SUPERFAMILY SSF140931 68 248 7.46E-46 T 11-10-2018 IPR036597 Fido-like domain superfamily Clos_1921 7b2263b3bd45484d249df8f32b65ec03 255 Pfam PF02661 Fic/DOC family 92 187 3.1E-22 T 11-10-2018 IPR003812 Fido domain Clos_1921 7b2263b3bd45484d249df8f32b65ec03 255 Gene3D G3DSA:1.10.3290.10 1 250 5.6E-75 T 11-10-2018 IPR036597 Fido-like domain superfamily Clos_1306 bb9ab8cb41e970f607af8bda1ea0d78d 73 Pfam PF07872 Protein of unknown function (DUF1659) 15 51 2.1E-8 T 11-10-2018 IPR012454 Protein of unknown function DUF1659 Clos_2763 4a409282f6482b06b60a128aa2b30b63 420 Pfam PF13791 Sigma factor regulator C-terminal 233 395 2.0E-18 T 11-10-2018 IPR025672 Sigma factor regulator C-terminal domain Clos_2583 182b31d3c9888d029b38dc4250c61394 388 Pfam PF12698 ABC-2 family transporter protein 19 381 3.1E-35 T 11-10-2018 Clos_1027 267fc3f54c891f42ecc6f754eb7637f9 232 Pfam PF04143 Sulphur transport 64 224 6.2E-31 T 11-10-2018 IPR007272 Sulphur transport domain Clos_1077 0641e15b1f44cc4e06b10c18d42e4800 83 Pfam PF12773 Double zinc ribbon 34 77 2.0E-8 T 11-10-2018 IPR025874 Double zinc ribbon Clos_2328 bd77369473d7670872731a94721156b9 1240 TIGRFAM TIGR02025 BchH: magnesium chelatase, H subunit 118 1237 3.6E-250 T 11-10-2018 IPR011771 Magnesium-chelatase, subunit H GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Clos_2328 bd77369473d7670872731a94721156b9 1240 Pfam PF02514 CobN/Magnesium Chelatase 151 1222 0.0 T 11-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 Clos_2577 0221187ee2ab82a4ccf63fe4d8b0dabf 450 Pfam PF01098 Cell cycle protein 67 439 3.5E-79 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Clos_2046 ebb1a2a0293ab24600655b8c6c3a78ea 159 Gene3D G3DSA:3.40.630.30 4 138 9.7E-13 T 11-10-2018 Clos_2046 ebb1a2a0293ab24600655b8c6c3a78ea 159 Pfam PF00583 Acetyltransferase (GNAT) family 38 135 8.5E-8 T 11-10-2018 IPR000182 GNAT domain Clos_2046 ebb1a2a0293ab24600655b8c6c3a78ea 159 SUPERFAMILY SSF55729 26 155 3.04E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Clos_2674 e2e0c82d01ccebff7ab1e424debbd126 462 Pfam PF03553 Na+/H+ antiporter family 173 444 4.5E-28 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Clos_1998 f1f0c943b1997237093c561d71d24f61 89 SUPERFAMILY SSF46689 2 88 1.08E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Clos_2618 cb3f9895487e02e296fd05b2403c8823 785 Pfam PF02687 FtsX-like permease family 685 774 4.8E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_2618 cb3f9895487e02e296fd05b2403c8823 785 Pfam PF02687 FtsX-like permease family 298 388 1.1E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_2532 346d17d4bece69812ca9eb2d8316c2da 155 Pfam PF06695 Putative small multi-drug export protein 24 144 1.1E-39 T 11-10-2018 IPR009577 Putative small multi-drug export Clos_1658 20dcfc197bde67120507120bd6098b19 197 Pfam PF03956 Lysine exporter LysO 7 195 4.5E-59 T 11-10-2018 IPR005642 Lysine exporter LysO Clos_1658 20dcfc197bde67120507120bd6098b19 197 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 36 195 3.0E-30 T 11-10-2018 IPR005642 Lysine exporter LysO Clos_2117 b91fe61a6f54a682413b4aba0dba9418 248 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 240 1.3E-34 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase Clos_2718 46c1c77e5c4a3b6d7ec6c30f9daf157a 496 PIRSF PIRSF005690 5 494 9.5E-160 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Clos_2718 46c1c77e5c4a3b6d7ec6c30f9daf157a 496 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 19 479 6.5E-166 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Clos_0023 4d5c6cc9a9024f1e5b1cd72b2a727e17 89 Pfam PF11823 Protein of unknown function (DUF3343) 8 75 3.5E-24 T 11-10-2018 IPR021778 Domain of unknown function DUF3343 Clos_1963 4352237faf6ca1116a413beda0ba3d46 370 Pfam PF04143 Sulphur transport 207 315 1.7E-7 T 11-10-2018 IPR007272 Sulphur transport domain Clos_1963 4352237faf6ca1116a413beda0ba3d46 370 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 8 345 2.2E-152 T 11-10-2018 IPR026366 Putative selenium metabolism protein, YedE family Clos_0387 95a5c3762fbcf51a3b5441f330e69c35 298 Pfam PF14257 Domain of unknown function (DUF4349) 26 285 5.0E-64 T 11-10-2018 IPR025645 Domain of unknown function DUF4349 Clos_2420 bfac7d2e5a682ca2602dfe4c8dd7fec0 431 Pfam PF07613 Protein of unknown function (DUF1576) 261 423 6.6E-54 T 11-10-2018 IPR011470 Protein of unknown function DUF1576 Clos_2420 bfac7d2e5a682ca2602dfe4c8dd7fec0 431 Pfam PF07613 Protein of unknown function (DUF1576) 48 222 1.7E-59 T 11-10-2018 IPR011470 Protein of unknown function DUF1576 Clos_0412 09b7333f5ffff613f7fa93e3113650d7 77 Pfam PF10852 Protein of unknown function (DUF2651) 9 75 9.4E-18 T 11-10-2018 IPR020258 Uncharacterised protein family YbeF Clos_1886 317eaf644cb1199beb9abd8f114a3229 210 Pfam PF10543 ORF6N domain 26 107 2.1E-15 T 11-10-2018 IPR018873 KilA-N, DNA-binding domain Clos_1024 79066a7dbd27367c8eb083e6fa78d8b1 196 Pfam PF02417 Chromate transporter 6 170 5.9E-45 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Clos_2602 e85da5d1fb2599eb20a98a227544ed7c 493 Pfam PF00395 S-layer homology domain 359 402 2.8E-12 T 11-10-2018 IPR001119 S-layer homology domain Clos_2602 e85da5d1fb2599eb20a98a227544ed7c 493 Pfam PF00395 S-layer homology domain 423 466 6.1E-6 T 11-10-2018 IPR001119 S-layer homology domain Clos_2602 e85da5d1fb2599eb20a98a227544ed7c 493 Pfam PF00395 S-layer homology domain 288 328 1.4E-4 T 11-10-2018 IPR001119 S-layer homology domain Clos_0924 3d6222d9a64eb643ebd71d9f670fac01 387 Pfam PF05684 Protein of unknown function (DUF819) 10 385 4.8E-109 T 11-10-2018 IPR008537 Protein of unknown function DUF819 Clos_1153 5dba79a0bc0d6e584a4d55ee6bc36e22 71 Pfam PF11213 Protein of unknown function (DUF3006) 5 69 2.2E-19 T 11-10-2018 IPR021377 Protein of unknown function DUF3006 Clos_1430 df0e2d8fdd4e9154d12e2cf21ec2c40c 230 Pfam PF04298 Putative neutral zinc metallopeptidase 10 224 2.3E-87 T 11-10-2018 IPR007395 Putative neutral zinc metallopeptidase Clos_2378 5b602c4e04e3580ae94df5fe7d2e4b52 352 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 332 3.8E-33 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Clos_0730 bc95d012beed0a35384b8caa50679c45 816 Pfam PF02687 FtsX-like permease family 276 373 4.8E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_1404 e0a71ca8a74802f806c9e7b2c2016182 587 Pfam PF13687 Domain of unknown function (DUF4153) 160 381 3.3E-68 T 11-10-2018 IPR025291 Protein of unknown function DUF4153 Clos_0677 cb31611fdde865be877ba0cbf251c66e 188 Pfam PF08905 Domain of unknown function (DUF1850) 70 156 6.7E-23 T 11-10-2018 IPR015001 Protein of unknown function DUF1850 Clos_0181 990221d5eb12a6321dae08a43fdf28d7 134 Pfam PF04519 Polymer-forming cytoskeletal 15 111 8.3E-27 T 11-10-2018 IPR007607 Bactofilin A/B Clos_0142 0c00d8baca6547bd5ecb5c8d93ce1c2b 403 Pfam PF12704 MacB-like periplasmic core domain 21 240 1.9E-24 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Clos_0142 0c00d8baca6547bd5ecb5c8d93ce1c2b 403 Pfam PF02687 FtsX-like permease family 309 392 1.5E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Clos_0612 36ca9e260cc04499eef0b2c6967a9813 712 Gene3D G3DSA:3.20.20.80 57 451 4.0E-9 T 11-10-2018 Clos_0612 36ca9e260cc04499eef0b2c6967a9813 712 SUPERFAMILY SSF51445 60 410 2.7E-15 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Clos_0845 6e37716b81dae027cc3e346588f18092 453 Pfam PF07670 Nucleoside recognition 140 237 3.8E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Clos_2727 e34af3c86a34d47fd9251ce22d3e2a52 139 Pfam PF17428 Family of unknown function (DUF5412) 3 138 1.1E-9 T 11-10-2018 IPR035406 Protein of unknown function DUF5412 Clos_0829 5a550287fd74cdf696b11a0f64e67be3 192 Pfam PF02417 Chromate transporter 12 175 4.5E-39 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 Clos_0224 85bf9a38bc42e16fa586f7517dceb435 124 Pfam PF17032 zinc-ribbon family 20 120 6.9E-25 T 11-10-2018 IPR031493 Zinc-ribbon 15 Clos_1667 1f24c082cf4523d8545a461b990140a0 411 Pfam PF01594 AI-2E family transporter 75 403 2.1E-72 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Clos_0058 46fa9dcaaee4299c5fca0245c335b273 355 Pfam PF01757 Acyltransferase family 11 330 3.8E-29 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Clos_0872 1fa3877c30d3cfb8565feb7350572531 55 Gene3D G3DSA:3.40.50.720 2 55 3.9E-16 T 11-10-2018 Clos_0706 413c9d3440e930acee7bdec85a898f7b 425 Pfam PF05975 Bacterial ABC transporter protein EcsB 7 403 1.6E-81 T 11-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 Clos_1302 cca8ae1519d0eff73c4b2f7add603345 265 Pfam PF12686 Protein of unknown function (DUF3800) 5 247 2.3E-32 T 11-10-2018 IPR024524 Protein of unknown function DUF3800