locus-tag class description LVQ62_00025 PF13472 GDSL-like Lipase/Acylhydrolase family LVQ62_00030 PF02803 Thiolase, C-terminal domain LVQ62_00030 PF00108 Thiolase, N-terminal domain LVQ62_00055 PF07730 Histidine kinase LVQ62_00060 PF00005 ABC transporter LVQ62_00075 PF02541 Ppx/GppA phosphatase family LVQ62_00090 PF00113 Enolase, C-terminal TIM barrel domain LVQ62_00090 PF03952 Enolase, N-terminal domain LVQ62_00095 PF03819 MazG nucleotide pyrophosphohydrolase domain LVQ62_00105 PF02559 CarD-like/TRCF domain LVQ62_00105 PF00270 DEAD/DEAH box helicase LVQ62_00105 PF00271 Helicase conserved C-terminal domain LVQ62_00105 PF03461 TRCF domain LVQ62_00105 PF17757 UvrB interaction domain LVQ62_00115 PF01195 Peptidyl-tRNA hydrolase LVQ62_00120 PF01386 Ribosomal L25p family LVQ62_00120 PF14693 Ribosomal protein TL5, C-terminal domain LVQ62_00125 PF14572 Phosphoribosyl synthetase-associated domain LVQ62_00125 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LVQ62_00130 PF12804 MobA-like NTP transferase domain LVQ62_00155 PF01047 MarR family LVQ62_00160 PF00005 ABC transporter LVQ62_00160 PF16326 ABC transporter C-terminal domain LVQ62_00160 PF12848 ABC transporter LVQ62_00165 PF00288 GHMP kinases N terminal domain LVQ62_00165 PF08544 GHMP kinases C terminal LVQ62_00170 PF00398 Ribosomal RNA adenine dimethylase LVQ62_00175 PF01026 TatD related DNase LVQ62_00180 PF09334 tRNA synthetases class I (M) LVQ62_00185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVQ62_00190 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LVQ62_00190 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase LVQ62_00230 PF00106 short chain dehydrogenase LVQ62_00250 PF13302 Acetyltransferase (GNAT) domain LVQ62_00255 PF00994 Probable molybdopterin binding domain LVQ62_00260 PF01967 MoaC family LVQ62_00265 PF00994 Probable molybdopterin binding domain LVQ62_00265 PF03453 MoeA N-terminal region (domain I and II) LVQ62_00265 PF03454 MoeA C-terminal region (domain IV) LVQ62_00270 PF00483 Nucleotidyl transferase LVQ62_00275 PF01812 5-formyltetrahydrofolate cyclo-ligase family LVQ62_00280 PF03471 Transporter associated domain LVQ62_00280 PF00999 Sodium/hydrogen exchanger family LVQ62_00280 PF02080 TrkA-C domain LVQ62_00290 PF01048 Phosphorylase superfamily LVQ62_00325 PF01594 AI-2E family transporter LVQ62_00350 PF00501 AMP-binding enzyme LVQ62_00350 PF13193 AMP-binding enzyme C-terminal domain LVQ62_00355 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LVQ62_00360 PF00561 alpha/beta hydrolase fold LVQ62_00365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_00365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_00365 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_00385 PF02803 Thiolase, C-terminal domain LVQ62_00385 PF00108 Thiolase, N-terminal domain LVQ62_00390 PF01144 Coenzyme A transferase LVQ62_00395 PF01144 Coenzyme A transferase LVQ62_00400 PF00455 DeoR C terminal sensor domain LVQ62_00400 PF08220 DeoR-like helix-turn-helix domain LVQ62_00405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LVQ62_00405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LVQ62_00410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LVQ62_00410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LVQ62_00415 PF02653 Branched-chain amino acid transport system / permease component LVQ62_00420 PF00005 ABC transporter LVQ62_00430 PF00300 Histidine phosphatase superfamily (branch 1) LVQ62_00435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LVQ62_00455 PF01476 LysM domain LVQ62_00455 PF00877 NlpC/P60 family LVQ62_00455 PF08239 Bacterial SH3 domain LVQ62_00460 PF02742 Iron dependent repressor, metal binding and dimerisation domain LVQ62_00460 PF01325 Iron dependent repressor, N-terminal DNA binding domain LVQ62_00460 PF18357 Diphteria toxin repressor SH3 domain LVQ62_00465 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LVQ62_00465 PF01243 Pyridoxamine 5'-phosphate oxidase LVQ62_00470 PF00266 Aminotransferase class-V LVQ62_00475 PF03773 Predicted permease LVQ62_00485 PF11838 ERAP1-like C-terminal domain LVQ62_00485 PF01433 Peptidase family M1 domain LVQ62_00500 PF00072 Response regulator receiver domain LVQ62_00500 PF00486 Transcriptional regulatory protein, C terminal LVQ62_00505 PF00672 HAMP domain LVQ62_00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_00505 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_00510 PF00672 HAMP domain LVQ62_00510 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_00510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_00515 PF13180 PDZ domain LVQ62_00525 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_00525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LVQ62_00535 PF08281 Sigma-70, region 4 LVQ62_00535 PF04542 Sigma-70 region 2 LVQ62_00550 PF02705 K+ potassium transporter LVQ62_00555 PF00155 Aminotransferase class I and II LVQ62_00560 PF00118 TCP-1/cpn60 chaperonin family LVQ62_00605 PF00005 ABC transporter LVQ62_00605 PF12857 TOBE-like domain LVQ62_00610 PF00465 Iron-containing alcohol dehydrogenase LVQ62_00615 PF01212 Beta-eliminating lyase LVQ62_00630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_00630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_00630 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_00635 PF00106 short chain dehydrogenase LVQ62_00640 PF01263 Aldose 1-epimerase LVQ62_00645 PF00501 AMP-binding enzyme LVQ62_00645 PF13193 AMP-binding enzyme C-terminal domain LVQ62_00655 PF01431 Peptidase family M13 LVQ62_00655 PF05649 Peptidase family M13 LVQ62_00660 PF00682 HMGL-like LVQ62_00690 PF04851 Type III restriction enzyme, res subunit LVQ62_00690 PF00271 Helicase conserved C-terminal domain LVQ62_00700 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LVQ62_00700 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LVQ62_00715 PF11228 Protein of unknown function (DUF3027) LVQ62_00720 PF00313 'Cold-shock' DNA-binding domain LVQ62_00735 PF00378 Enoyl-CoA hydratase/isomerase LVQ62_00745 PF13378 Enolase C-terminal domain-like LVQ62_00745 PF18374 Enolase N-terminal domain-like LVQ62_00750 PF00459 Inositol monophosphatase family LVQ62_00755 PF00106 short chain dehydrogenase LVQ62_00765 PF01040 UbiA prenyltransferase family LVQ62_00795 PF00753 Metallo-beta-lactamase superfamily LVQ62_00805 PF01578 Cytochrome C assembly protein LVQ62_00815 PF02683 Cytochrome C biogenesis protein transmembrane region LVQ62_00825 PF00300 Histidine phosphatase superfamily (branch 1) LVQ62_00830 PF00202 Aminotransferase class-III LVQ62_00840 PF00490 Delta-aminolevulinic acid dehydratase LVQ62_00845 PF10414 Sirohaem synthase dimerisation region LVQ62_00845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVQ62_00845 PF14824 Sirohaem biosynthesis protein central LVQ62_00850 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LVQ62_00850 PF03900 Porphobilinogen deaminase, C-terminal domain LVQ62_00855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LVQ62_00855 PF01488 Shikimate / quinate 5-dehydrogenase LVQ62_00855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LVQ62_00860 PF06971 Putative DNA-binding protein N-terminus LVQ62_00860 PF02629 CoA binding domain LVQ62_00870 PF01553 Acyltransferase LVQ62_00875 PF01370 NAD dependent epimerase/dehydratase family LVQ62_00885 PF12728 Helix-turn-helix domain LVQ62_00890 PF00850 Histone deacetylase domain LVQ62_00900 PF14748 Pyrroline-5-carboxylate reductase dimerisation LVQ62_00900 PF03807 NADP oxidoreductase coenzyme F420-dependent LVQ62_00905 PF01619 Proline dehydrogenase LVQ62_00910 PF01841 Transglutaminase-like superfamily LVQ62_00910 PF08379 Bacterial transglutaminase-like N-terminal region LVQ62_00920 PF04174 A circularly permuted ATPgrasp LVQ62_00930 PF00005 ABC transporter LVQ62_00935 PF04978 Protein of unknown function (DUF664) LVQ62_00940 PF02308 MgtC family LVQ62_00950 PF01261 Xylose isomerase-like TIM barrel LVQ62_00955 PF02541 Ppx/GppA phosphatase family LVQ62_00965 PF18073 Rubredoxin metal binding domain LVQ62_00965 PF06745 KaiC LVQ62_00970 PF02457 DisA bacterial checkpoint controller nucleotide-binding LVQ62_00970 PF10635 DisA bacterial checkpoint controller linker region LVQ62_00970 PF00633 Helix-hairpin-helix motif LVQ62_00975 PF00633 Helix-hairpin-helix motif LVQ62_00975 PF00730 HhH-GPD superfamily base excision DNA repair protein LVQ62_00995 PF00005 ABC transporter LVQ62_01005 PF00583 Acetyltransferase (GNAT) family LVQ62_01010 PF07724 AAA domain (Cdc48 subfamily) LVQ62_01010 PF17871 AAA lid domain LVQ62_01010 PF02861 Clp amino terminal domain, pathogenicity island component LVQ62_01010 PF10431 C-terminal, D2-small domain, of ClpB protein LVQ62_01010 PF00004 ATPase family associated with various cellular activities (AAA) LVQ62_01025 PF02735 Ku70/Ku80 beta-barrel domain LVQ62_01030 PF13298 DNA polymerase Ligase (LigD) LVQ62_01030 PF04679 ATP dependent DNA ligase C terminal region LVQ62_01030 PF01068 ATP dependent DNA ligase domain LVQ62_01035 PF04679 ATP dependent DNA ligase C terminal region LVQ62_01035 PF01068 ATP dependent DNA ligase domain LVQ62_01035 PF13298 DNA polymerase Ligase (LigD) LVQ62_01050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LVQ62_01050 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LVQ62_01055 PF12833 Helix-turn-helix domain LVQ62_01055 PF02805 Metal binding domain of Ada LVQ62_01055 PF06029 AlkA N-terminal domain LVQ62_01055 PF00730 HhH-GPD superfamily base excision DNA repair protein LVQ62_01060 PF02569 Pantoate-beta-alanine ligase LVQ62_01095 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LVQ62_01105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LVQ62_01110 PF00809 Pterin binding enzyme LVQ62_01115 PF01227 GTP cyclohydrolase I LVQ62_01120 PF17862 AAA+ lid domain LVQ62_01120 PF01434 Peptidase family M41 LVQ62_01120 PF00004 ATPase family associated with various cellular activities (AAA) LVQ62_01125 PF00156 Phosphoribosyl transferase domain LVQ62_01130 PF09179 TilS substrate binding domain LVQ62_01130 PF01171 PP-loop family LVQ62_01140 PF00135 Carboxylesterase family LVQ62_01150 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LVQ62_01155 PF00719 Inorganic pyrophosphatase LVQ62_01165 PF00561 alpha/beta hydrolase fold LVQ62_01175 PF00196 Bacterial regulatory proteins, luxR family LVQ62_01185 PF00270 DEAD/DEAH box helicase LVQ62_01185 PF00271 Helicase conserved C-terminal domain LVQ62_01190 PF01212 Beta-eliminating lyase LVQ62_01200 PF00174 Oxidoreductase molybdopterin binding domain LVQ62_01220 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_01220 PF00107 Zinc-binding dehydrogenase LVQ62_01230 PF00356 Bacterial regulatory proteins, lacI family LVQ62_01245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVQ62_01245 PF03466 LysR substrate binding domain LVQ62_01275 PF12705 PD-(D/E)XK nuclease superfamily LVQ62_01275 PF00580 UvrD/REP helicase N-terminal domain LVQ62_01275 PF13361 UvrD-like helicase C-terminal domain LVQ62_01355 PF00561 alpha/beta hydrolase fold LVQ62_01360 PF09115 DNA polymerase III, delta subunit, C terminal LVQ62_01365 PF02223 Thymidylate kinase LVQ62_01375 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_01375 PF00107 Zinc-binding dehydrogenase LVQ62_01380 PF01131 DNA topoisomerase LVQ62_01380 PF01751 Toprim domain LVQ62_01380 PF13368 Topoisomerase C-terminal repeat LVQ62_01385 PF05175 Methyltransferase small domain LVQ62_01385 PF17827 PrmC N-terminal domain LVQ62_01390 PF01740 STAS domain LVQ62_01395 PF09369 Domain of unknown function (DUF1998) LVQ62_01395 PF00271 Helicase conserved C-terminal domain LVQ62_01395 PF00270 DEAD/DEAH box helicase LVQ62_01430 PF00437 Type II/IV secretion system protein LVQ62_01450 PF03471 Transporter associated domain LVQ62_01450 PF02080 TrkA-C domain LVQ62_01450 PF00999 Sodium/hydrogen exchanger family LVQ62_01460 PF00293 NUDIX domain LVQ62_01465 PF10576 Iron-sulfur binding domain of endonuclease III LVQ62_01465 PF00633 Helix-hairpin-helix motif LVQ62_01465 PF00730 HhH-GPD superfamily base excision DNA repair protein LVQ62_01470 PF00027 Cyclic nucleotide-binding domain LVQ62_01470 PF13545 Crp-like helix-turn-helix domain LVQ62_01475 PF16123 Hydroxyacylglutathione hydrolase C-terminus LVQ62_01475 PF00753 Metallo-beta-lactamase superfamily LVQ62_01480 PF01183 Glycosyl hydrolases family 25 LVQ62_01505 PF02374 Anion-transporting ATPase LVQ62_01510 PF02374 Anion-transporting ATPase LVQ62_01515 PF02467 Transcription factor WhiB LVQ62_01520 PF00912 Transglycosylase LVQ62_01520 PF00905 Penicillin binding protein transpeptidase domain LVQ62_01540 PF18272 single-stranded DNA binding TraI N-terminal subdomain LVQ62_01540 PF07057 DNA helicase TraI LVQ62_01540 PF18340 DNA relaxase TraI 2B/2B-like domain LVQ62_01540 PF08751 TrwC relaxase LVQ62_01565 PF08463 EcoEI R protein C-terminal LVQ62_01565 PF00271 Helicase conserved C-terminal domain LVQ62_01565 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LVQ62_01565 PF04851 Type III restriction enzyme, res subunit LVQ62_01575 PF14338 Mrr N-terminal domain LVQ62_01575 PF04471 Restriction endonuclease LVQ62_01580 PF12728 Helix-turn-helix domain LVQ62_01590 PF12161 HsdM N-terminal domain LVQ62_01590 PF02384 N-6 DNA Methylase LVQ62_01605 PF00589 Phage integrase family LVQ62_01605 PF14659 Phage integrase, N-terminal SAM-like domain LVQ62_01615 PF02913 FAD linked oxidases, C-terminal domain LVQ62_01615 PF01565 FAD binding domain LVQ62_01620 PF01266 FAD dependent oxidoreductase LVQ62_01620 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LVQ62_01635 PF01145 SPFH domain / Band 7 family LVQ62_01635 PF15975 Flotillin LVQ62_01640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_01640 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_01640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_01645 PF00005 ABC transporter LVQ62_01650 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_01675 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_01680 PF12704 MacB-like periplasmic core domain LVQ62_01680 PF02687 FtsX-like permease family LVQ62_01680 PF00005 ABC transporter LVQ62_01690 PF02774 Semialdehyde dehydrogenase, dimerisation domain LVQ62_01690 PF01118 Semialdehyde dehydrogenase, NAD binding domain LVQ62_01695 PF02774 Semialdehyde dehydrogenase, dimerisation domain LVQ62_01695 PF01118 Semialdehyde dehydrogenase, NAD binding domain LVQ62_01715 PF02132 RecR protein LVQ62_01715 PF13662 Toprim domain LVQ62_01725 PF01451 Low molecular weight phosphotyrosine protein phosphatase LVQ62_01730 PF01758 Sodium Bile acid symporter family LVQ62_01735 PF13847 Methyltransferase domain LVQ62_01740 PF01022 Bacterial regulatory protein, arsR family LVQ62_01760 PF12169 DNA polymerase III subunits gamma and tau domain III LVQ62_01780 PF00491 Arginase family LVQ62_01790 PF00248 Aldo/keto reductase family LVQ62_01830 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LVQ62_01835 PF01425 Amidase LVQ62_01845 PF05872 Bacterial protein of unknown function (DUF853) LVQ62_01870 PF00083 Sugar (and other) transporter LVQ62_01875 PF13520 Amino acid permease LVQ62_01880 PF14437 MafB19-like deaminase LVQ62_01900 PF01327 Polypeptide deformylase LVQ62_01905 PF08450 SMP-30/Gluconolactonase/LRE-like region LVQ62_01920 PF00698 Acyl transferase domain LVQ62_01920 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_01920 PF08990 Erythronolide synthase docking LVQ62_01920 PF16197 Ketoacyl-synthetase C-terminal extension LVQ62_01920 PF00109 Beta-ketoacyl synthase, N-terminal domain LVQ62_01920 PF02801 Beta-ketoacyl synthase, C-terminal domain LVQ62_01920 PF08659 KR domain LVQ62_01920 PF00550 Phosphopantetheine attachment site LVQ62_01920 PF14765 Polyketide synthase dehydratase LVQ62_01935 PF13419 Haloacid dehalogenase-like hydrolase LVQ62_01940 PF03632 Glycosyl hydrolase family 65 central catalytic domain LVQ62_01940 PF03633 Glycosyl hydrolase family 65, C-terminal domain LVQ62_01940 PF03636 Glycosyl hydrolase family 65, N-terminal domain LVQ62_01955 PF01544 CorA-like Mg2+ transporter protein LVQ62_01975 PF00300 Histidine phosphatase superfamily (branch 1) LVQ62_01980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LVQ62_01980 PF07685 CobB/CobQ-like glutamine amidotransferase domain LVQ62_01985 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVQ62_01990 PF00266 Aminotransferase class-V LVQ62_01995 PF00266 Aminotransferase class-V LVQ62_02000 PF00881 Nitroreductase family LVQ62_02010 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LVQ62_02015 PF02570 Precorrin-8X methylmutase LVQ62_02020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVQ62_02040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVQ62_02045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVQ62_02050 PF17863 AAA lid domain LVQ62_02050 PF13519 von Willebrand factor type A domain LVQ62_02050 PF07728 AAA domain (dynein-related subfamily) LVQ62_02060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LVQ62_02060 PF07685 CobB/CobQ-like glutamine amidotransferase domain LVQ62_02065 PF10414 Sirohaem synthase dimerisation region LVQ62_02065 PF14824 Sirohaem biosynthesis protein central LVQ62_02065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LVQ62_02070 PF02654 Cobalamin-5-phosphate synthase LVQ62_02075 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LVQ62_02080 PF03186 CobD/Cbib protein LVQ62_02085 PF02571 Precorrin-6x reductase CbiJ/CobK LVQ62_02090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LVQ62_02090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LVQ62_02095 PF00230 Major intrinsic protein LVQ62_02100 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LVQ62_02100 PF01266 FAD dependent oxidoreductase LVQ62_02110 PF12146 Serine aminopeptidase, S33 LVQ62_02120 PF00486 Transcriptional regulatory protein, C terminal LVQ62_02120 PF00072 Response regulator receiver domain LVQ62_02125 PF00672 HAMP domain LVQ62_02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_02125 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_02135 PF08220 DeoR-like helix-turn-helix domain LVQ62_02135 PF00455 DeoR C terminal sensor domain LVQ62_02140 PF00121 Triosephosphate isomerase LVQ62_02145 PF02502 Ribose/Galactose Isomerase LVQ62_02155 PF13407 Periplasmic binding protein domain LVQ62_02160 PF02653 Branched-chain amino acid transport system / permease component LVQ62_02175 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_02175 PF00107 Zinc-binding dehydrogenase LVQ62_02185 PF03816 Cell envelope-related transcriptional attenuator domain LVQ62_02190 PF00313 'Cold-shock' DNA-binding domain LVQ62_02200 PF00072 Response regulator receiver domain LVQ62_02200 PF00196 Bacterial regulatory proteins, luxR family LVQ62_02205 PF07730 Histidine kinase LVQ62_02215 PF00005 ABC transporter LVQ62_02225 PF00196 Bacterial regulatory proteins, luxR family LVQ62_02230 PF01061 ABC-2 type transporter LVQ62_02235 PF00005 ABC transporter LVQ62_02235 PF13732 Domain of unknown function (DUF4162) LVQ62_02245 PF00216 Bacterial DNA-binding protein LVQ62_02255 PF00196 Bacterial regulatory proteins, luxR family LVQ62_02255 PF00072 Response regulator receiver domain LVQ62_02270 PF00248 Aldo/keto reductase family LVQ62_02280 PF08281 Sigma-70, region 4 LVQ62_02280 PF04542 Sigma-70 region 2 LVQ62_02290 PF00132 Bacterial transferase hexapeptide (six repeats) LVQ62_02295 PF00291 Pyridoxal-phosphate dependent enzyme LVQ62_02300 PF02754 Cysteine-rich domain LVQ62_02300 PF13183 4Fe-4S dicluster domain LVQ62_02300 PF02665 Nitrate reductase gamma subunit LVQ62_02320 PF00664 ABC transporter transmembrane region LVQ62_02320 PF00005 ABC transporter LVQ62_02325 PF00005 ABC transporter LVQ62_02325 PF00664 ABC transporter transmembrane region LVQ62_02340 PF00692 dUTPase LVQ62_02345 PF00196 Bacterial regulatory proteins, luxR family LVQ62_02345 PF00072 Response regulator receiver domain LVQ62_02350 PF07730 Histidine kinase LVQ62_02350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_02370 PF01161 Phosphatidylethanolamine-binding protein LVQ62_02375 PF01475 Ferric uptake regulator family LVQ62_02380 PF05235 CHAD domain LVQ62_02380 PF01928 CYTH domain LVQ62_02385 PF03576 Peptidase family S58 LVQ62_02390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_02390 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_02390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_02390 PF12806 Acetyl-CoA dehydrogenase C-terminal like LVQ62_02395 PF02754 Cysteine-rich domain LVQ62_02400 PF11870 Domain of unknown function (DUF3390) LVQ62_02400 PF13183 4Fe-4S dicluster domain LVQ62_02400 PF02589 LUD domain LVQ62_02405 PF02589 LUD domain LVQ62_02410 PF17991 Thioredoxin like C-terminal domain LVQ62_02410 PF02683 Cytochrome C biogenesis protein transmembrane region LVQ62_02410 PF00578 AhpC/TSA family LVQ62_02420 PF00795 Carbon-nitrogen hydrolase LVQ62_02425 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) LVQ62_02425 PF05425 Copper resistance protein D LVQ62_02440 PF07690 Major Facilitator Superfamily LVQ62_02445 PF01565 FAD binding domain LVQ62_02445 PF13183 4Fe-4S dicluster domain LVQ62_02445 PF02913 FAD linked oxidases, C-terminal domain LVQ62_02450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LVQ62_02450 PF02817 e3 binding domain LVQ62_02450 PF00364 Biotin-requiring enzyme LVQ62_02455 PF02779 Transketolase, pyrimidine binding domain LVQ62_02455 PF02780 Transketolase, C-terminal domain LVQ62_02460 PF00676 Dehydrogenase E1 component LVQ62_02470 PF00155 Aminotransferase class I and II LVQ62_02525 PF07690 Major Facilitator Superfamily LVQ62_02560 PF00196 Bacterial regulatory proteins, luxR family LVQ62_02580 PF16363 GDP-mannose 4,6 dehydratase LVQ62_02585 PF05746 DALR anticodon binding domain LVQ62_02585 PF03485 Arginyl tRNA synthetase N terminal domain LVQ62_02585 PF00750 tRNA synthetases class I (R) LVQ62_02595 PF02673 Bacitracin resistance protein BacA LVQ62_02610 PF17755 UvrA DNA-binding domain LVQ62_02615 PF01226 Formate/nitrite transporter LVQ62_02620 PF00561 alpha/beta hydrolase fold LVQ62_02630 PF00005 ABC transporter LVQ62_02630 PF16326 ABC transporter C-terminal domain LVQ62_02630 PF12848 ABC transporter LVQ62_02640 PF07690 Major Facilitator Superfamily LVQ62_02665 PF00440 Bacterial regulatory proteins, tetR family LVQ62_02665 PF13977 BetI-type transcriptional repressor, C-terminal LVQ62_02670 PF05368 NmrA-like family LVQ62_02680 PF01209 ubiE/COQ5 methyltransferase family LVQ62_02705 PF00589 Phage integrase family LVQ62_02705 PF02899 Phage integrase, N-terminal SAM-like domain LVQ62_02725 PF01654 Cytochrome bd terminal oxidase subunit I LVQ62_02730 PF02322 Cytochrome bd terminal oxidase subunit II LVQ62_02735 PF00664 ABC transporter transmembrane region LVQ62_02735 PF00005 ABC transporter LVQ62_02740 PF03965 Penicillinase repressor LVQ62_02750 PF01435 Peptidase family M48 LVQ62_02755 PF03176 MMPL family LVQ62_02770 PF00202 Aminotransferase class-III LVQ62_02775 PF00155 Aminotransferase class I and II LVQ62_02805 PF08328 Adenylosuccinate lyase C-terminal LVQ62_02805 PF00206 Lyase LVQ62_02810 PF02583 Metal-sensitive transcriptional repressor LVQ62_02825 PF00480 ROK family LVQ62_02830 PF02653 Branched-chain amino acid transport system / permease component LVQ62_02835 PF00005 ABC transporter LVQ62_02845 PF01261 Xylose isomerase-like TIM barrel LVQ62_02860 PF03848 Tellurite resistance protein TehB LVQ62_02865 PF17754 MftR C-terminal domain LVQ62_02865 PF00440 Bacterial regulatory proteins, tetR family LVQ62_02900 PF00781 Diacylglycerol kinase catalytic domain LVQ62_02910 PF07690 Major Facilitator Superfamily LVQ62_02915 PF01842 ACT domain LVQ62_02915 PF00800 Prephenate dehydratase LVQ62_02935 PF03009 Glycerophosphoryl diester phosphodiesterase family LVQ62_02940 PF04545 Sigma-70, region 4 LVQ62_02940 PF04542 Sigma-70 region 2 LVQ62_02940 PF04539 Sigma-70 region 3 LVQ62_02950 PF01225 Mur ligase family, catalytic domain LVQ62_02950 PF02875 Mur ligase family, glutamate ligase domain LVQ62_02950 PF08245 Mur ligase middle domain LVQ62_02960 PF07664 Ferrous iron transport protein B C terminus LVQ62_02960 PF02421 Ferrous iron transport protein B LVQ62_02960 PF07670 Nucleoside recognition LVQ62_02965 PF07670 Nucleoside recognition LVQ62_02965 PF04023 FeoA domain LVQ62_02965 PF07664 Ferrous iron transport protein B C terminus LVQ62_02965 PF02421 Ferrous iron transport protein B LVQ62_02965 PF17910 FeoB cytosolic helical domain LVQ62_02970 PF13520 Amino acid permease LVQ62_02975 PF01545 Cation efflux family LVQ62_02975 PF16916 Dimerisation domain of Zinc Transporter LVQ62_02980 PF00206 Lyase LVQ62_02980 PF10415 Fumarase C C-terminus LVQ62_02985 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LVQ62_02990 PF05724 Thiopurine S-methyltransferase (TPMT) LVQ62_02995 PF00248 Aldo/keto reductase family LVQ62_03000 PF13193 AMP-binding enzyme C-terminal domain LVQ62_03000 PF00501 AMP-binding enzyme LVQ62_03000 PF16177 Acetyl-coenzyme A synthetase N-terminus LVQ62_03005 PF01184 GPR1/FUN34/yaaH family LVQ62_03015 PF00149 Calcineurin-like phosphoesterase LVQ62_03070 PF02687 FtsX-like permease family LVQ62_03070 PF00005 ABC transporter LVQ62_03070 PF12704 MacB-like periplasmic core domain LVQ62_03085 PF08543 Phosphomethylpyrimidine kinase LVQ62_03090 PF01206 Sulfurtransferase TusA LVQ62_03090 PF00581 Rhodanese-like domain LVQ62_03100 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LVQ62_03100 PF06827 Zinc finger found in FPG and IleRS LVQ62_03110 PF07690 Major Facilitator Superfamily LVQ62_03115 PF01047 MarR family LVQ62_03125 PF00005 ABC transporter LVQ62_03155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LVQ62_03160 PF13404 AsnC-type helix-turn-helix domain LVQ62_03160 PF17805 AsnC-like ligand binding domain LVQ62_03175 PF12706 Beta-lactamase superfamily domain LVQ62_03180 PF00364 Biotin-requiring enzyme LVQ62_03180 PF00561 alpha/beta hydrolase fold LVQ62_03205 PF00230 Major intrinsic protein LVQ62_03210 PF00107 Zinc-binding dehydrogenase LVQ62_03210 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_03225 PF02954 Bacterial regulatory protein, Fis family LVQ62_03225 PF01590 GAF domain LVQ62_03240 PF01425 Amidase LVQ62_03260 PF02342 TerD domain LVQ62_03270 PF02342 TerD domain LVQ62_03280 PF02342 TerD domain LVQ62_03295 PF03466 LysR substrate binding domain LVQ62_03295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVQ62_03310 PF03358 NADPH-dependent FMN reductase LVQ62_03315 PF03795 YCII-related domain LVQ62_03325 PF00588 SpoU rRNA Methylase family LVQ62_03350 PF00487 Fatty acid desaturase LVQ62_03355 PF00970 Oxidoreductase FAD-binding domain LVQ62_03355 PF00111 2Fe-2S iron-sulfur cluster binding domain LVQ62_03355 PF00175 Oxidoreductase NAD-binding domain LVQ62_03360 PF13556 PucR C-terminal helix-turn-helix domain LVQ62_03360 PF17853 GGDEF-like domain LVQ62_03360 PF05651 Putative sugar diacid recognition LVQ62_03375 PF01220 Dehydroquinase class II LVQ62_03425 PF00171 Aldehyde dehydrogenase family LVQ62_03440 PF14759 Reductase C-terminal LVQ62_03440 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_03450 PF02585 GlcNAc-PI de-N-acetylase LVQ62_03475 PF13439 Glycosyltransferase Family 4 LVQ62_03490 PF00535 Glycosyl transferase family 2 LVQ62_03490 PF02709 N-terminal domain of galactosyltransferase LVQ62_03510 PF11066 Protein of unknown function (DUF2867) LVQ62_03510 PF13460 NAD(P)H-binding LVQ62_03515 PF00210 Ferritin-like domain LVQ62_03530 PF02733 Dak1 domain LVQ62_03535 PF01674 Lipase (class 2) LVQ62_03540 PF01329 Pterin 4 alpha carbinolamine dehydratase LVQ62_03580 PF00107 Zinc-binding dehydrogenase LVQ62_03580 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_03585 PF00155 Aminotransferase class I and II LVQ62_03590 PF07690 Major Facilitator Superfamily LVQ62_03615 PF00248 Aldo/keto reductase family LVQ62_03620 PF13520 Amino acid permease LVQ62_03625 PF05175 Methyltransferase small domain LVQ62_03630 PF03405 Fatty acid desaturase LVQ62_03635 PF03458 UPF0126 domain LVQ62_03640 PF07687 Peptidase dimerisation domain LVQ62_03640 PF01546 Peptidase family M20/M25/M40 LVQ62_03655 PF00486 Transcriptional regulatory protein, C terminal LVQ62_03655 PF00072 Response regulator receiver domain LVQ62_03660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_03660 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_03660 PF00672 HAMP domain LVQ62_03670 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LVQ62_03670 PF12838 4Fe-4S dicluster domain LVQ62_03670 PF10531 SLBB domain LVQ62_03670 PF13375 RnfC Barrel sandwich hybrid domain LVQ62_03690 PF07995 Glucose / Sorbosone dehydrogenase LVQ62_03695 PF00296 Luciferase-like monooxygenase LVQ62_03730 PF07883 Cupin domain LVQ62_03755 PF16697 Inner membrane component of T3SS, cytoplasmic domain LVQ62_03765 PF01098 Cell cycle protein LVQ62_03770 PF00905 Penicillin binding protein transpeptidase domain LVQ62_03775 PF00069 Protein kinase domain LVQ62_03790 PF03793 PASTA domain LVQ62_03790 PF00069 Protein kinase domain LVQ62_03805 PF00117 Glutamine amidotransferase class-I LVQ62_03815 PF06781 Cell division protein CrgA LVQ62_03825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LVQ62_03840 PF00291 Pyridoxal-phosphate dependent enzyme LVQ62_03840 PF00585 C-terminal regulatory domain of Threonine dehydratase LVQ62_03845 PF00248 Aldo/keto reductase family LVQ62_03865 PF03773 Predicted permease LVQ62_03870 PF07731 Multicopper oxidase LVQ62_03870 PF00394 Multicopper oxidase LVQ62_03870 PF07732 Multicopper oxidase LVQ62_03885 PF00664 ABC transporter transmembrane region LVQ62_03885 PF00005 ABC transporter LVQ62_03890 PF00535 Glycosyl transferase family 2 LVQ62_03910 PF01370 NAD dependent epimerase/dehydratase family LVQ62_03915 PF16363 GDP-mannose 4,6 dehydratase LVQ62_03945 PF00534 Glycosyl transferases group 1 LVQ62_03945 PF13439 Glycosyltransferase Family 4 LVQ62_03955 PF00535 Glycosyl transferase family 2 LVQ62_03960 PF00291 Pyridoxal-phosphate dependent enzyme LVQ62_03975 PF04542 Sigma-70 region 2 LVQ62_03975 PF08281 Sigma-70, region 4 LVQ62_03985 PF00296 Luciferase-like monooxygenase LVQ62_03995 PF00561 alpha/beta hydrolase fold LVQ62_04020 PF12089 Transmembrane domain of unknown function (DUF3566) LVQ62_04025 PF00521 DNA gyrase/topoisomerase IV, subunit A LVQ62_04025 PF03989 DNA gyrase C-terminal domain, beta-propeller LVQ62_04030 PF00986 DNA gyrase B subunit, carboxyl terminus LVQ62_04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_04030 PF00204 DNA gyrase B LVQ62_04030 PF01751 Toprim domain LVQ62_04040 PF05258 Dna[CI] antecedent, DciA LVQ62_04045 PF02463 RecF/RecN/SMC N terminal domain LVQ62_04055 PF00712 DNA polymerase III beta subunit, N-terminal domain LVQ62_04055 PF02767 DNA polymerase III beta subunit, central domain LVQ62_04055 PF02768 DNA polymerase III beta subunit, C-terminal domain LVQ62_04060 PF00308 Bacterial dnaA protein LVQ62_04060 PF08299 Bacterial dnaA protein helix-turn-helix LVQ62_04065 PF00468 Ribosomal protein L34 LVQ62_04070 PF00825 Ribonuclease P LVQ62_04075 PF01809 Putative membrane protein insertion efficiency factor LVQ62_04080 PF02096 60Kd inner membrane protein LVQ62_04090 PF02527 rRNA small subunit methyltransferase G LVQ62_04100 PF17762 HTH domain found in ParB protein LVQ62_04100 PF02195 ParB-like nuclease domain LVQ62_04105 PF00085 Thioredoxin LVQ62_04110 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_04130 PF04542 Sigma-70 region 2 LVQ62_04130 PF08281 Sigma-70, region 4 LVQ62_04135 PF03793 PASTA domain LVQ62_04135 PF00069 Protein kinase domain LVQ62_04140 PF03023 Lipid II flippase MurJ LVQ62_04150 PF00293 NUDIX domain LVQ62_04150 PF09297 NADH pyrophosphatase zinc ribbon domain LVQ62_04155 PF01743 Poly A polymerase head domain LVQ62_04155 PF12627 Probable RNA and SrmB- binding site of polymerase A LVQ62_04155 PF13735 tRNA nucleotidyltransferase domain 2 putative LVQ62_04160 PF00067 Cytochrome P450 LVQ62_04165 PF00534 Glycosyl transferases group 1 LVQ62_04165 PF13439 Glycosyltransferase Family 4 LVQ62_04180 PF03795 YCII-related domain LVQ62_04185 PF04542 Sigma-70 region 2 LVQ62_04185 PF08281 Sigma-70, region 4 LVQ62_04205 PF00364 Biotin-requiring enzyme LVQ62_04215 PF00440 Bacterial regulatory proteins, tetR family LVQ62_04215 PF08361 MAATS-type transcriptional repressor, C-terminal region LVQ62_04230 PF04546 Sigma-70, non-essential region LVQ62_04230 PF03979 Sigma-70 factor, region 1.1 LVQ62_04230 PF00140 Sigma-70 factor, region 1.2 LVQ62_04230 PF04542 Sigma-70 region 2 LVQ62_04230 PF04539 Sigma-70 region 3 LVQ62_04230 PF04545 Sigma-70, region 4 LVQ62_04240 PF11774 Lsr2 LVQ62_04260 PF03780 Asp23 family, cell envelope-related function LVQ62_04335 PF02543 Carbamoyltransferase N-terminus LVQ62_04335 PF16861 Carbamoyltransferase C-terminus LVQ62_04355 PF01658 Myo-inositol-1-phosphate synthase LVQ62_04360 PF03551 Transcriptional regulator PadR-like family LVQ62_04365 PF02566 OsmC-like protein LVQ62_04370 PF00912 Transglycosylase LVQ62_04370 PF00905 Penicillin binding protein transpeptidase domain LVQ62_04375 PF09347 Domain of unknown function (DUF1989) LVQ62_04395 PF01250 Ribosomal protein S6 LVQ62_04400 PF00436 Single-strand binding protein family LVQ62_04405 PF01084 Ribosomal protein S18 LVQ62_04410 PF03948 Ribosomal protein L9, C-terminal domain LVQ62_04410 PF01281 Ribosomal protein L9, N-terminal domain LVQ62_04415 PF02342 TerD domain LVQ62_04425 PF08239 Bacterial SH3 domain LVQ62_04425 PF01476 LysM domain LVQ62_04425 PF00877 NlpC/P60 family LVQ62_04445 PF08239 Bacterial SH3 domain LVQ62_04445 PF00877 NlpC/P60 family LVQ62_04445 PF01476 LysM domain LVQ62_04450 PF00772 DnaB-like helicase N terminal domain LVQ62_04450 PF03796 DnaB-like helicase C terminal domain LVQ62_04480 PF13091 PLD-like domain LVQ62_04480 PF13396 Phospholipase_D-nuclease N-terminal LVQ62_04510 PF01476 LysM domain LVQ62_04510 PF05257 CHAP domain LVQ62_04515 PF01979 Amidohydrolase family LVQ62_04525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LVQ62_04525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LVQ62_04535 PF00860 Permease family LVQ62_04540 PF01014 Uricase LVQ62_04545 PF00576 HIUase/Transthyretin family LVQ62_04555 PF09339 IclR helix-turn-helix domain LVQ62_04555 PF01614 Bacterial transcriptional regulator LVQ62_04570 PF01261 Xylose isomerase-like TIM barrel LVQ62_04575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LVQ62_04575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LVQ62_04580 PF00205 Thiamine pyrophosphate enzyme, central domain LVQ62_04580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LVQ62_04580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LVQ62_04585 PF02595 Glycerate kinase family LVQ62_04590 PF01979 Amidohydrolase family LVQ62_04595 PF03561 Allantoicase repeat LVQ62_04600 PF00535 Glycosyl transferase family 2 LVQ62_04605 PF00535 Glycosyl transferase family 2 LVQ62_04610 PF08421 Putative zinc binding domain LVQ62_04610 PF08484 C-methyltransferase C-terminal domain LVQ62_04615 PF00132 Bacterial transferase hexapeptide (six repeats) LVQ62_04615 PF00483 Nucleotidyl transferase LVQ62_04625 PF16363 GDP-mannose 4,6 dehydratase LVQ62_04630 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LVQ62_04635 PF08421 Putative zinc binding domain LVQ62_04635 PF08484 C-methyltransferase C-terminal domain LVQ62_04640 PF01381 Helix-turn-helix LVQ62_04645 PF00106 short chain dehydrogenase LVQ62_04650 PF03641 Possible lysine decarboxylase LVQ62_04660 PF00296 Luciferase-like monooxygenase LVQ62_04680 PF00171 Aldehyde dehydrogenase family LVQ62_04690 PF00296 Luciferase-like monooxygenase LVQ62_04700 PF00248 Aldo/keto reductase family LVQ62_04730 PF00698 Acyl transferase domain LVQ62_04730 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_04730 PF16197 Ketoacyl-synthetase C-terminal extension LVQ62_04730 PF00109 Beta-ketoacyl synthase, N-terminal domain LVQ62_04730 PF02801 Beta-ketoacyl synthase, C-terminal domain LVQ62_04730 PF08659 KR domain LVQ62_04730 PF00550 Phosphopantetheine attachment site LVQ62_04730 PF14765 Polyketide synthase dehydratase LVQ62_04740 PF00296 Luciferase-like monooxygenase LVQ62_04745 PF00248 Aldo/keto reductase family LVQ62_04760 PF03575 Peptidase family S51 LVQ62_04770 PF07690 Major Facilitator Superfamily LVQ62_04785 PF02585 GlcNAc-PI de-N-acetylase LVQ62_04805 PF01810 LysE type translocator LVQ62_04825 PF12697 Alpha/beta hydrolase family LVQ62_04835 PF00365 Phosphofructokinase LVQ62_04845 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LVQ62_04845 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LVQ62_04850 PF00106 short chain dehydrogenase LVQ62_04880 PF02652 L-lactate permease LVQ62_04885 PF02754 Cysteine-rich domain LVQ62_04885 PF13183 4Fe-4S dicluster domain LVQ62_04895 PF01565 FAD binding domain LVQ62_04895 PF02913 FAD linked oxidases, C-terminal domain LVQ62_04900 PF02913 FAD linked oxidases, C-terminal domain LVQ62_04900 PF01565 FAD binding domain LVQ62_04920 PF01494 FAD binding domain LVQ62_04925 PF00743 Flavin-binding monooxygenase-like LVQ62_04930 PF13439 Glycosyltransferase Family 4 LVQ62_04930 PF00534 Glycosyl transferases group 1 LVQ62_04935 PF08241 Methyltransferase domain LVQ62_04950 PF10783 Protein of unknown function (DUF2599) LVQ62_04955 PF02515 CoA-transferase family III LVQ62_04960 PF01965 DJ-1/PfpI family LVQ62_04965 PF13520 Amino acid permease LVQ62_04970 PF00085 Thioredoxin LVQ62_04995 PF00378 Enoyl-CoA hydratase/isomerase LVQ62_05000 PF00293 NUDIX domain LVQ62_05020 PF00795 Carbon-nitrogen hydrolase LVQ62_05020 PF02540 NAD synthase LVQ62_05030 PF00176 SNF2 family N-terminal domain LVQ62_05030 PF00271 Helicase conserved C-terminal domain LVQ62_05030 PF12419 SNF2 Helicase protein LVQ62_05050 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LVQ62_05050 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LVQ62_05070 PF01380 SIS domain LVQ62_05090 PF04545 Sigma-70, region 4 LVQ62_05090 PF04542 Sigma-70 region 2 LVQ62_05090 PF04539 Sigma-70 region 3 LVQ62_05095 PF00501 AMP-binding enzyme LVQ62_05095 PF13193 AMP-binding enzyme C-terminal domain LVQ62_05110 PF00300 Histidine phosphatase superfamily (branch 1) LVQ62_05115 PF03737 Aldolase/RraA LVQ62_05120 PF12146 Serine aminopeptidase, S33 LVQ62_05135 PF00890 FAD binding domain LVQ62_05140 PF01594 AI-2E family transporter LVQ62_05145 PF00293 NUDIX domain LVQ62_05150 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_05150 PF00107 Zinc-binding dehydrogenase LVQ62_05175 PF00221 Aromatic amino acid lyase LVQ62_05180 PF01175 Urocanase Rossmann-like domain LVQ62_05180 PF17392 Urocanase C-terminal domain LVQ62_05180 PF17391 Urocanase N-terminal domain LVQ62_05185 PF01546 Peptidase family M20/M25/M40 LVQ62_05195 PF01979 Amidohydrolase family LVQ62_05200 PF12796 Ankyrin repeats (3 copies) LVQ62_05200 PF00023 Ankyrin repeat LVQ62_05240 PF08402 TOBE domain LVQ62_05240 PF00005 ABC transporter LVQ62_05275 PF00005 ABC transporter LVQ62_05285 PF13193 AMP-binding enzyme C-terminal domain LVQ62_05285 PF00501 AMP-binding enzyme LVQ62_05290 PF00403 Heavy-metal-associated domain LVQ62_05310 PF02653 Branched-chain amino acid transport system / permease component LVQ62_05315 PF02653 Branched-chain amino acid transport system / permease component LVQ62_05320 PF00005 ABC transporter LVQ62_05325 PF13407 Periplasmic binding protein domain LVQ62_05330 PF08220 DeoR-like helix-turn-helix domain LVQ62_05330 PF00455 DeoR C terminal sensor domain LVQ62_05340 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LVQ62_05345 PF01047 MarR family LVQ62_05365 PF04264 YceI-like domain LVQ62_05395 PF00293 NUDIX domain LVQ62_05415 PF00067 Cytochrome P450 LVQ62_05425 PF01593 Flavin containing amine oxidoreductase LVQ62_05445 PF00860 Permease family LVQ62_05475 PF06441 Epoxide hydrolase N terminus LVQ62_05490 PF00266 Aminotransferase class-V LVQ62_05495 PF00012 Hsp70 protein LVQ62_05500 PF01025 GrpE LVQ62_05505 PF00684 DnaJ central domain LVQ62_05505 PF01556 DnaJ C terminal domain LVQ62_05505 PF00226 DnaJ domain LVQ62_05510 PF13411 MerR HTH family regulatory protein LVQ62_05515 PF02016 LD-carboxypeptidase N-terminal domain LVQ62_05515 PF17676 LD-carboxypeptidase C-terminal domain LVQ62_05535 PF00294 pfkB family carbohydrate kinase LVQ62_05550 PF10604 Polyketide cyclase / dehydrase and lipid transport LVQ62_05555 PF13472 GDSL-like Lipase/Acylhydrolase family LVQ62_05565 PF00535 Glycosyl transferase family 2 LVQ62_05575 PF02633 Creatinine amidohydrolase LVQ62_05585 PF13186 Iron-sulfur cluster-binding domain LVQ62_05585 PF04055 Radical SAM superfamily LVQ62_05600 PF00465 Iron-containing alcohol dehydrogenase LVQ62_05620 PF08241 Methyltransferase domain LVQ62_05630 PF14765 Polyketide synthase dehydratase LVQ62_05630 PF08659 KR domain LVQ62_05630 PF00550 Phosphopantetheine attachment site LVQ62_05630 PF00698 Acyl transferase domain LVQ62_05630 PF16197 Ketoacyl-synthetase C-terminal extension LVQ62_05630 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_05630 PF02801 Beta-ketoacyl synthase, C-terminal domain LVQ62_05630 PF00109 Beta-ketoacyl synthase, N-terminal domain LVQ62_05635 PF00196 Bacterial regulatory proteins, luxR family LVQ62_05635 PF00072 Response regulator receiver domain LVQ62_05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_05640 PF07730 Histidine kinase LVQ62_05645 PF00465 Iron-containing alcohol dehydrogenase LVQ62_05650 PF13472 GDSL-like Lipase/Acylhydrolase family LVQ62_05655 PF01179 Copper amine oxidase, enzyme domain LVQ62_05655 PF02728 Copper amine oxidase, N3 domain LVQ62_05665 PF00004 ATPase family associated with various cellular activities (AAA) LVQ62_05665 PF07724 AAA domain (Cdc48 subfamily) LVQ62_05665 PF17871 AAA lid domain LVQ62_05665 PF02861 Clp amino terminal domain, pathogenicity island component LVQ62_05665 PF10431 C-terminal, D2-small domain, of ClpB protein LVQ62_05680 PF07690 Major Facilitator Superfamily LVQ62_05685 PF00743 Flavin-binding monooxygenase-like LVQ62_05710 PF03372 Endonuclease/Exonuclease/phosphatase family LVQ62_05740 PF00156 Phosphoribosyl transferase domain LVQ62_05785 PF09335 SNARE associated Golgi protein LVQ62_05790 PF17668 Acetyltransferase (GNAT) domain LVQ62_05790 PF13530 Sterol carrier protein domain LVQ62_05805 PF01116 Fructose-bisphosphate aldolase class-II LVQ62_05820 PF00709 Adenylosuccinate synthetase LVQ62_05830 PF07690 Major Facilitator Superfamily LVQ62_05835 PF07690 Major Facilitator Superfamily LVQ62_05840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LVQ62_05840 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LVQ62_05845 PF01921 tRNA synthetases class I (K) LVQ62_05850 PF01817 Chorismate mutase type II LVQ62_05850 PF02153 Prephenate dehydrogenase LVQ62_05865 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LVQ62_05865 PF02843 Phosphoribosylglycinamide synthetase, C domain LVQ62_05865 PF02844 Phosphoribosylglycinamide synthetase, N domain LVQ62_05875 PF01259 SAICAR synthetase LVQ62_05880 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LVQ62_05890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LVQ62_05890 PF02769 AIR synthase related protein, C-terminal domain LVQ62_05890 PF00586 AIR synthase related protein, N-terminal domain LVQ62_05895 PF01243 Pyridoxamine 5'-phosphate oxidase LVQ62_05900 PF03992 Antibiotic biosynthesis monooxygenase LVQ62_05935 PF00586 AIR synthase related protein, N-terminal domain LVQ62_05935 PF02769 AIR synthase related protein, C-terminal domain LVQ62_05945 PF04234 CopC domain LVQ62_05965 PF14791 DNA polymerase beta thumb LVQ62_05965 PF02811 PHP domain LVQ62_05965 PF14716 Helix-hairpin-helix domain LVQ62_05975 PF00291 Pyridoxal-phosphate dependent enzyme LVQ62_06000 PF13460 NAD(P)H-binding LVQ62_06000 PF11066 Protein of unknown function (DUF2867) LVQ62_06010 PF01070 FMN-dependent dehydrogenase LVQ62_06015 PF00248 Aldo/keto reductase family LVQ62_06020 PF02557 D-alanyl-D-alanine carboxypeptidase LVQ62_06025 PF01232 Mannitol dehydrogenase Rossmann domain LVQ62_06025 PF08125 Mannitol dehydrogenase C-terminal domain LVQ62_06030 PF02614 Glucuronate isomerase LVQ62_06040 PF02540 NAD synthase LVQ62_06045 PF00731 AIR carboxylase LVQ62_06050 PF01969 Protein of unknown function DUF111 LVQ62_06065 PF08148 DSHCT (NUC185) domain LVQ62_06065 PF00270 DEAD/DEAH box helicase LVQ62_06065 PF00271 Helicase conserved C-terminal domain LVQ62_06070 PF00128 Alpha amylase, catalytic domain LVQ62_06075 PF00128 Alpha amylase, catalytic domain LVQ62_06075 PF11941 Domain of unknown function (DUF3459) LVQ62_06085 PF01613 Flavin reductase like domain LVQ62_06095 PF00005 ABC transporter LVQ62_06100 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_06105 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_06110 PF12849 PBP superfamily domain LVQ62_06120 PF01116 Fructose-bisphosphate aldolase class-II LVQ62_06125 PF13419 Haloacid dehalogenase-like hydrolase LVQ62_06130 PF02734 DAK2 domain LVQ62_06135 PF02733 Dak1 domain LVQ62_06140 PF00300 Histidine phosphatase superfamily (branch 1) LVQ62_06140 PF00293 NUDIX domain LVQ62_06145 PF13089 Polyphosphate kinase N-terminal domain LVQ62_06145 PF13090 Polyphosphate kinase C-terminal domain 2 LVQ62_06145 PF02503 Polyphosphate kinase middle domain LVQ62_06145 PF17941 Polyphosphate kinase C-terminal domain 1 LVQ62_06150 PF00583 Acetyltransferase (GNAT) family LVQ62_06185 PF00486 Transcriptional regulatory protein, C terminal LVQ62_06200 PF08768 Domain of unknown function (DUF1794) LVQ62_06210 PF01571 Aminomethyltransferase folate-binding domain LVQ62_06215 PF01209 ubiE/COQ5 methyltransferase family LVQ62_06220 PF01381 Helix-turn-helix LVQ62_06235 PF02580 D-Tyr-tRNA(Tyr) deacylase LVQ62_06245 PF01238 Phosphomannose isomerase type I LVQ62_06255 PF13439 Glycosyltransferase Family 4 LVQ62_06255 PF00534 Glycosyl transferases group 1 LVQ62_06260 PF10722 Putative bacterial sensory transduction regulator LVQ62_06265 PF00300 Histidine phosphatase superfamily (branch 1) LVQ62_06275 PF01895 PhoU domain LVQ62_06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_06280 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_06285 PF00072 Response regulator receiver domain LVQ62_06285 PF00486 Transcriptional regulatory protein, C terminal LVQ62_06295 PF02559 CarD-like/TRCF domain LVQ62_06310 PF02542 YgbB family LVQ62_06315 PF00248 Aldo/keto reductase family LVQ62_06320 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_06320 PF00107 Zinc-binding dehydrogenase LVQ62_06330 PF09190 DALR domain LVQ62_06330 PF01406 tRNA synthetases class I (C) catalytic domain LVQ62_06335 PF00588 SpoU rRNA Methylase family LVQ62_06335 PF08032 RNA 2'-O ribose methyltransferase substrate binding LVQ62_06340 PF07687 Peptidase dimerisation domain LVQ62_06340 PF01546 Peptidase family M20/M25/M40 LVQ62_06345 PF06271 RDD family LVQ62_06355 PF03583 Secretory lipase LVQ62_06410 PF02358 Trehalose-phosphatase LVQ62_06415 PF00982 Glycosyltransferase family 20 LVQ62_06425 PF00069 Protein kinase domain LVQ62_06425 PF13360 PQQ-like domain LVQ62_06435 PF11574 Protein of unknown function (DUF3235) LVQ62_06435 PF06737 Transglycosylase-like domain LVQ62_06460 PF00005 ABC transporter LVQ62_06475 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_06475 PF02743 Cache domain LVQ62_06480 PF08279 HTH domain LVQ62_06480 PF00072 Response regulator receiver domain LVQ62_06500 PF00664 ABC transporter transmembrane region LVQ62_06500 PF00005 ABC transporter LVQ62_06510 PF01494 FAD binding domain LVQ62_06515 PF02797 Chalcone and stilbene synthases, C-terminal domain LVQ62_06515 PF00195 Chalcone and stilbene synthases, N-terminal domain LVQ62_06535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LVQ62_06535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LVQ62_06540 PF04299 Putative FMN-binding domain LVQ62_06545 PF00255 Glutathione peroxidase LVQ62_06550 PF00425 chorismate binding enzyme LVQ62_06555 PF03583 Secretory lipase LVQ62_06560 PF01209 ubiE/COQ5 methyltransferase family LVQ62_06565 PF01494 FAD binding domain LVQ62_06570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LVQ62_06575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LVQ62_06580 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LVQ62_06585 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LVQ62_06595 PF10531 SLBB domain LVQ62_06595 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LVQ62_06595 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LVQ62_06600 PF01568 Molydopterin dinucleotide binding domain LVQ62_06600 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LVQ62_06600 PF00384 Molybdopterin oxidoreductase LVQ62_06605 PF00146 NADH dehydrogenase LVQ62_06610 PF12838 4Fe-4S dicluster domain LVQ62_06615 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LVQ62_06620 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LVQ62_06630 PF00361 Proton-conducting membrane transporter LVQ62_06635 PF00361 Proton-conducting membrane transporter LVQ62_06640 PF00348 Polyprenyl synthetase LVQ62_06650 PF01565 FAD binding domain LVQ62_06650 PF04030 D-arabinono-1,4-lactone oxidase LVQ62_06655 PF00005 ABC transporter LVQ62_06670 PF00196 Bacterial regulatory proteins, luxR family LVQ62_06670 PF00072 Response regulator receiver domain LVQ62_06700 PF00892 EamA-like transporter family LVQ62_06705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LVQ62_06710 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LVQ62_06710 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LVQ62_06710 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LVQ62_06720 PF01774 UreD urease accessory protein LVQ62_06725 PF02492 CobW/HypB/UreG, nucleotide-binding domain LVQ62_06735 PF01979 Amidohydrolase family LVQ62_06735 PF00449 Urease alpha-subunit, N-terminal domain LVQ62_06740 PF00699 Urease beta subunit LVQ62_06745 PF00547 Urease, gamma subunit LVQ62_06750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LVQ62_06750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LVQ62_06755 PF01037 Lrp/AsnC ligand binding domain LVQ62_06765 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LVQ62_06770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LVQ62_06775 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LVQ62_06780 PF00146 NADH dehydrogenase LVQ62_06785 PF00037 4Fe-4S binding domain LVQ62_06790 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LVQ62_06795 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LVQ62_06805 PF00361 Proton-conducting membrane transporter LVQ62_06805 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LVQ62_06810 PF00361 Proton-conducting membrane transporter LVQ62_06815 PF00361 Proton-conducting membrane transporter LVQ62_06820 PF01435 Peptidase family M48 LVQ62_06825 PF01433 Peptidase family M1 domain LVQ62_06825 PF11838 ERAP1-like C-terminal domain LVQ62_06840 PF01370 NAD dependent epimerase/dehydratase family LVQ62_06845 PF11808 Phosphate regulon sensor protein PhoR LVQ62_06845 PF00989 PAS fold LVQ62_06845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_06845 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_06850 PF00535 Glycosyl transferase family 2 LVQ62_06885 PF13419 Haloacid dehalogenase-like hydrolase LVQ62_06890 PF04461 Protein of unknown function (DUF520) LVQ62_06900 PF07690 Major Facilitator Superfamily LVQ62_06910 PF00440 Bacterial regulatory proteins, tetR family LVQ62_06915 PF00108 Thiolase, N-terminal domain LVQ62_06915 PF02803 Thiolase, C-terminal domain LVQ62_06925 PF01575 MaoC like domain LVQ62_06940 PF00471 Ribosomal protein L33 LVQ62_06945 PF13452 N-terminal half of MaoC dehydratase LVQ62_06955 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LVQ62_06955 PF01565 FAD binding domain LVQ62_06965 PF13305 Tetracyclin repressor-like, C-terminal domain LVQ62_06965 PF00440 Bacterial regulatory proteins, tetR family LVQ62_06975 PF00962 Adenosine/AMP deaminase LVQ62_06980 PF00364 Biotin-requiring enzyme LVQ62_06980 PF02817 e3 binding domain LVQ62_06980 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LVQ62_06985 PF02780 Transketolase, C-terminal domain LVQ62_06985 PF02779 Transketolase, pyrimidine binding domain LVQ62_06995 PF01037 Lrp/AsnC ligand binding domain LVQ62_07010 PF02357 Transcription termination factor nusG LVQ62_07015 PF00298 Ribosomal protein L11, RNA binding domain LVQ62_07015 PF03946 Ribosomal protein L11, N-terminal domain LVQ62_07030 PF00466 Ribosomal protein L10 LVQ62_07035 PF16320 Ribosomal protein L7/L12 dimerisation domain LVQ62_07035 PF00542 Ribosomal protein L7/L12 C-terminal domain LVQ62_07045 PF00562 RNA polymerase Rpb2, domain 6 LVQ62_07045 PF04560 RNA polymerase Rpb2, domain 7 LVQ62_07045 PF10385 RNA polymerase beta subunit external 1 domain LVQ62_07045 PF04563 RNA polymerase beta subunit LVQ62_07045 PF04561 RNA polymerase Rpb2, domain 2 LVQ62_07045 PF04565 RNA polymerase Rpb2, domain 3 LVQ62_07050 PF04997 RNA polymerase Rpb1, domain 1 LVQ62_07050 PF00623 RNA polymerase Rpb1, domain 2 LVQ62_07050 PF04983 RNA polymerase Rpb1, domain 3 LVQ62_07050 PF05000 RNA polymerase Rpb1, domain 4 LVQ62_07050 PF04998 RNA polymerase Rpb1, domain 5 LVQ62_07075 PF00164 Ribosomal protein S12/S23 LVQ62_07080 PF00177 Ribosomal protein S7p/S5e LVQ62_07085 PF00009 Elongation factor Tu GTP binding domain LVQ62_07085 PF03764 Elongation factor G, domain IV LVQ62_07085 PF14492 Elongation Factor G, domain II LVQ62_07085 PF03144 Elongation factor Tu domain 2 LVQ62_07085 PF00679 Elongation factor G C-terminus LVQ62_07090 PF00009 Elongation factor Tu GTP binding domain LVQ62_07090 PF03143 Elongation factor Tu C-terminal domain LVQ62_07090 PF03144 Elongation factor Tu domain 2 LVQ62_07100 PF01381 Helix-turn-helix LVQ62_07105 PF00484 Carbonic anhydrase LVQ62_07110 PF12897 Alanine-glyoxylate amino-transferase LVQ62_07115 PF03618 Kinase/pyrophosphorylase LVQ62_07120 PF00391 PEP-utilising enzyme, mobile domain LVQ62_07120 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LVQ62_07120 PF02896 PEP-utilising enzyme, TIM barrel domain LVQ62_07130 PF00440 Bacterial regulatory proteins, tetR family LVQ62_07130 PF16859 Tetracyclin repressor-like, C-terminal domain LVQ62_07135 PF13419 Haloacid dehalogenase-like hydrolase LVQ62_07140 PF01761 3-dehydroquinate synthase LVQ62_07145 PF01596 O-methyltransferase LVQ62_07150 PF02668 Taurine catabolism dioxygenase TauD, TfdA family LVQ62_07160 PF01820 D-ala D-ala ligase N-terminus LVQ62_07160 PF07478 D-ala D-ala ligase C-terminus LVQ62_07165 PF03176 MMPL family LVQ62_07170 PF17754 MftR C-terminal domain LVQ62_07170 PF00440 Bacterial regulatory proteins, tetR family LVQ62_07195 PF00005 ABC transporter LVQ62_07205 PF00005 ABC transporter LVQ62_07210 PF00338 Ribosomal protein S10p/S20e LVQ62_07215 PF00297 Ribosomal protein L3 LVQ62_07220 PF00573 Ribosomal protein L4/L1 family LVQ62_07225 PF00276 Ribosomal protein L23 LVQ62_07230 PF03947 Ribosomal Proteins L2, C-terminal domain LVQ62_07230 PF00181 Ribosomal Proteins L2, RNA binding domain LVQ62_07235 PF00203 Ribosomal protein S19 LVQ62_07240 PF00237 Ribosomal protein L22p/L17e LVQ62_07245 PF07650 KH domain LVQ62_07245 PF00189 Ribosomal protein S3, C-terminal domain LVQ62_07250 PF00252 Ribosomal protein L16p/L10e LVQ62_07255 PF00831 Ribosomal L29 protein LVQ62_07260 PF00366 Ribosomal protein S17 LVQ62_07265 PF00238 Ribosomal protein L14p/L23e LVQ62_07270 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LVQ62_07275 PF00281 Ribosomal protein L5 LVQ62_07275 PF00673 ribosomal L5P family C-terminus LVQ62_07280 PF00253 Ribosomal protein S14p/S29e LVQ62_07285 PF00410 Ribosomal protein S8 LVQ62_07290 PF00347 Ribosomal protein L6 LVQ62_07295 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LVQ62_07300 PF03719 Ribosomal protein S5, C-terminal domain LVQ62_07300 PF00333 Ribosomal protein S5, N-terminal domain LVQ62_07305 PF00327 Ribosomal protein L30p/L7e LVQ62_07310 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LVQ62_07315 PF00344 SecY translocase LVQ62_07325 PF00557 Metallopeptidase family M24 LVQ62_07335 PF01176 Translation initiation factor 1A / IF-1 LVQ62_07340 PF00444 Ribosomal protein L36 LVQ62_07345 PF00416 Ribosomal protein S13/S18 LVQ62_07350 PF00411 Ribosomal protein S11 LVQ62_07355 PF00163 Ribosomal protein S4/S9 N-terminal domain LVQ62_07355 PF01479 S4 domain LVQ62_07360 PF01000 RNA polymerase Rpb3/RpoA insert domain LVQ62_07360 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LVQ62_07360 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LVQ62_07365 PF01196 Ribosomal protein L17 LVQ62_07375 PF07690 Major Facilitator Superfamily LVQ62_07380 PF01416 tRNA pseudouridine synthase LVQ62_07385 PF02626 Carboxyltransferase domain, subdomain A and B LVQ62_07395 PF03746 LamB/YcsF family LVQ62_07400 PF04978 Protein of unknown function (DUF664) LVQ62_07405 PF00005 ABC transporter LVQ62_07405 PF12848 ABC transporter LVQ62_07415 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_07415 PF13823 Alcohol dehydrogenase GroES-associated LVQ62_07415 PF00107 Zinc-binding dehydrogenase LVQ62_07440 PF00572 Ribosomal protein L13 LVQ62_07445 PF00380 Ribosomal protein S9/S16 LVQ62_07450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LVQ62_07450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LVQ62_07450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LVQ62_07450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LVQ62_07455 PF02566 OsmC-like protein LVQ62_07460 PF00440 Bacterial regulatory proteins, tetR family LVQ62_07485 PF00484 Carbonic anhydrase LVQ62_07490 PF05681 Fumarate hydratase (Fumerase) LVQ62_07490 PF05683 Fumarase C-terminus LVQ62_07500 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_07505 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_07510 PF00005 ABC transporter LVQ62_07510 PF17912 MalK OB fold domain LVQ62_07520 PF00106 short chain dehydrogenase LVQ62_07525 PF00294 pfkB family carbohydrate kinase LVQ62_07530 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LVQ62_07540 PF07690 Major Facilitator Superfamily LVQ62_07545 PF02609 Exonuclease VII small subunit LVQ62_07550 PF02601 Exonuclease VII, large subunit LVQ62_07550 PF13742 OB-fold nucleic acid binding domain LVQ62_07555 PF02401 LytB protein LVQ62_07560 PF02646 RmuC family LVQ62_07575 PF04542 Sigma-70 region 2 LVQ62_07575 PF04545 Sigma-70, region 4 LVQ62_07580 PF02469 Fasciclin domain LVQ62_07630 PF02661 Fic/DOC family LVQ62_07665 PF05547 Immune inhibitor A peptidase M6 LVQ62_07675 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LVQ62_07680 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LVQ62_07690 PF02261 Aspartate decarboxylase LVQ62_07700 PF07690 Major Facilitator Superfamily LVQ62_07705 PF00293 NUDIX domain LVQ62_07710 PF00196 Bacterial regulatory proteins, luxR family LVQ62_07710 PF00072 Response regulator receiver domain LVQ62_07720 PF03176 MMPL family LVQ62_07725 PF03176 MMPL family LVQ62_07735 PF00376 MerR family regulatory protein LVQ62_07735 PF09278 MerR, DNA binding LVQ62_07745 PF00679 Elongation factor G C-terminus LVQ62_07745 PF14492 Elongation Factor G, domain II LVQ62_07745 PF00009 Elongation factor Tu GTP binding domain LVQ62_07745 PF03144 Elongation factor Tu domain 2 LVQ62_07750 PF02585 GlcNAc-PI de-N-acetylase LVQ62_07755 PF01613 Flavin reductase like domain LVQ62_07760 PF04294 VanW like protein LVQ62_07765 PF07690 Major Facilitator Superfamily LVQ62_07775 PF00583 Acetyltransferase (GNAT) family LVQ62_07780 PF00037 4Fe-4S binding domain LVQ62_07785 PF00155 Aminotransferase class I and II LVQ62_07790 PF00285 Citrate synthase, C-terminal domain LVQ62_07810 PF00551 Formyl transferase LVQ62_07815 PF02142 MGS-like domain LVQ62_07815 PF01808 AICARFT/IMPCHase bienzyme LVQ62_07820 PF01894 Uncharacterised protein family UPF0047 LVQ62_07825 PF00583 Acetyltransferase (GNAT) family LVQ62_07835 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LVQ62_07835 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LVQ62_07845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LVQ62_07845 PF00056 lactate/malate dehydrogenase, NAD binding domain LVQ62_07855 PF00180 Isocitrate/isopropylmalate dehydrogenase LVQ62_07860 PF16363 GDP-mannose 4,6 dehydratase LVQ62_07865 PF02397 Bacterial sugar transferase LVQ62_07880 PF01943 Polysaccharide biosynthesis protein LVQ62_07885 PF13614 AAA domain LVQ62_07920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LVQ62_07920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LVQ62_07985 PF03372 Endonuclease/Exonuclease/phosphatase family LVQ62_07990 PF13344 Haloacid dehalogenase-like hydrolase LVQ62_08030 PF01370 NAD dependent epimerase/dehydratase family LVQ62_08035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LVQ62_08035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LVQ62_08035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LVQ62_08040 PF00132 Bacterial transferase hexapeptide (six repeats) LVQ62_08070 PF02397 Bacterial sugar transferase LVQ62_08075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LVQ62_08080 PF02719 Polysaccharide biosynthesis protein LVQ62_08085 PF02706 Chain length determinant protein LVQ62_08085 PF13807 G-rich domain on putative tyrosine kinase LVQ62_08085 PF13614 AAA domain LVQ62_08090 PF01451 Low molecular weight phosphotyrosine protein phosphatase LVQ62_08100 PF08220 DeoR-like helix-turn-helix domain LVQ62_08100 PF00455 DeoR C terminal sensor domain LVQ62_08105 PF00579 tRNA synthetases class I (W and Y) LVQ62_08120 PF02910 Fumarate reductase flavoprotein C-term LVQ62_08120 PF00890 FAD binding domain LVQ62_08130 PF13439 Glycosyltransferase Family 4 LVQ62_08130 PF00534 Glycosyl transferases group 1 LVQ62_08135 PF01050 Mannose-6-phosphate isomerase LVQ62_08135 PF00483 Nucleotidyl transferase LVQ62_08140 PF01180 Dihydroorotate dehydrogenase LVQ62_08150 PF02310 B12 binding domain LVQ62_08150 PF01642 Methylmalonyl-CoA mutase LVQ62_08155 PF00545 ribonuclease LVQ62_08170 PF01546 Peptidase family M20/M25/M40 LVQ62_08170 PF04107 Glutamate-cysteine ligase family 2(GCS2) LVQ62_08175 PF02608 ABC transporter substrate-binding protein PnrA-like LVQ62_08185 PF00005 ABC transporter LVQ62_08190 PF02653 Branched-chain amino acid transport system / permease component LVQ62_08195 PF02653 Branched-chain amino acid transport system / permease component LVQ62_08210 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LVQ62_08210 PF02885 Glycosyl transferase family, helical bundle domain LVQ62_08210 PF00591 Glycosyl transferase family, a/b domain LVQ62_08215 PF00962 Adenosine/AMP deaminase LVQ62_08240 PF17863 AAA lid domain LVQ62_08240 PF07726 ATPase family associated with various cellular activities (AAA) LVQ62_08245 PF14258 Domain of unknown function (DUF4350) LVQ62_08260 PF00171 Aldehyde dehydrogenase family LVQ62_08265 PF00171 Aldehyde dehydrogenase family LVQ62_08270 PF01791 DeoC/LacD family aldolase LVQ62_08280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LVQ62_08280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LVQ62_08280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LVQ62_08280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LVQ62_08285 PF01048 Phosphorylase superfamily LVQ62_08290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVQ62_08290 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_08305 PF00289 Biotin carboxylase, N-terminal domain LVQ62_08305 PF00364 Biotin-requiring enzyme LVQ62_08305 PF02785 Biotin carboxylase C-terminal domain LVQ62_08305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LVQ62_08310 PF00248 Aldo/keto reductase family LVQ62_08325 PF02861 Clp amino terminal domain, pathogenicity island component LVQ62_08325 PF17871 AAA lid domain LVQ62_08325 PF07724 AAA domain (Cdc48 subfamily) LVQ62_08325 PF00004 ATPase family associated with various cellular activities (AAA) LVQ62_08325 PF10431 C-terminal, D2-small domain, of ClpB protein LVQ62_08330 PF09055 Nickel-containing superoxide dismutase LVQ62_08345 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_08355 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LVQ62_08365 PF16363 GDP-mannose 4,6 dehydratase LVQ62_08370 PF04321 RmlD substrate binding domain LVQ62_08375 PF02397 Bacterial sugar transferase LVQ62_08385 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_08385 PF00107 Zinc-binding dehydrogenase LVQ62_08405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LVQ62_08405 PF00676 Dehydrogenase E1 component LVQ62_08405 PF16870 2-oxoglutarate dehydrogenase C-terminal LVQ62_08405 PF02779 Transketolase, pyrimidine binding domain LVQ62_08405 PF16078 2-oxoglutarate dehydrogenase N-terminus LVQ62_08415 PF00005 ABC transporter LVQ62_08420 PF00571 CBS domain LVQ62_08420 PF03471 Transporter associated domain LVQ62_08420 PF01595 Cyclin M transmembrane N-terminal domain LVQ62_08425 PF00571 CBS domain LVQ62_08425 PF01595 Cyclin M transmembrane N-terminal domain LVQ62_08435 PF00175 Oxidoreductase NAD-binding domain LVQ62_08435 PF00970 Oxidoreductase FAD-binding domain LVQ62_08435 PF00111 2Fe-2S iron-sulfur cluster binding domain LVQ62_08440 PF01883 Iron-sulfur cluster assembly protein LVQ62_08445 PF05138 Phenylacetic acid catabolic protein LVQ62_08450 PF06243 Phenylacetic acid degradation B LVQ62_08455 PF05138 Phenylacetic acid catabolic protein LVQ62_08465 PF03061 Thioesterase superfamily LVQ62_08470 PF00440 Bacterial regulatory proteins, tetR family LVQ62_08470 PF18665 Tetracyclin repressor-like, C-terminal domain LVQ62_08475 PF01361 Tautomerase enzyme LVQ62_08495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LVQ62_08495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LVQ62_08500 PF01842 ACT domain LVQ62_08500 PF03447 Homoserine dehydrogenase, NAD binding domain LVQ62_08500 PF00742 Homoserine dehydrogenase LVQ62_08505 PF00291 Pyridoxal-phosphate dependent enzyme LVQ62_08510 PF08544 GHMP kinases C terminal LVQ62_08510 PF00288 GHMP kinases N terminal domain LVQ62_08520 PF00083 Sugar (and other) transporter LVQ62_08525 PF01197 Ribosomal protein L31 LVQ62_08530 PF03462 PCRF domain LVQ62_08530 PF00472 RF-1 domain LVQ62_08535 PF13649 Methyltransferase domain LVQ62_08535 PF17827 PrmC N-terminal domain LVQ62_08540 PF05199 GMC oxidoreductase LVQ62_08540 PF00732 GMC oxidoreductase LVQ62_08545 PF00171 Aldehyde dehydrogenase family LVQ62_08550 PF13649 Methyltransferase domain LVQ62_08560 PF13520 Amino acid permease LVQ62_08580 PF00005 ABC transporter LVQ62_08580 PF17755 UvrA DNA-binding domain LVQ62_08580 PF17760 UvrA interaction domain LVQ62_08590 PF00291 Pyridoxal-phosphate dependent enzyme LVQ62_08595 PF01300 Telomere recombination LVQ62_08600 PF00464 Serine hydroxymethyltransferase LVQ62_08605 PF00953 Glycosyl transferase family 4 LVQ62_08615 PF00119 ATP synthase A chain LVQ62_08620 PF00137 ATP synthase subunit C LVQ62_08625 PF00430 ATP synthase B/B' CF(0) LVQ62_08630 PF00213 ATP synthase delta (OSCP) subunit LVQ62_08635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LVQ62_08635 PF00306 ATP synthase alpha/beta chain, C terminal domain LVQ62_08635 PF02874 ATP synthase alpha/beta family, beta-barrel domain LVQ62_08640 PF00231 ATP synthase LVQ62_08645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LVQ62_08645 PF02874 ATP synthase alpha/beta family, beta-barrel domain LVQ62_08655 PF07685 CobB/CobQ-like glutamine amidotransferase domain LVQ62_08660 PF08353 Domain of unknown function (DUF1727) LVQ62_08660 PF08245 Mur ligase middle domain LVQ62_08665 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LVQ62_08675 PF02903 Alpha amylase, N-terminal ig-like domain LVQ62_08675 PF16657 Maltogenic Amylase, C-terminal domain LVQ62_08675 PF00128 Alpha amylase, catalytic domain LVQ62_08685 PF04542 Sigma-70 region 2 LVQ62_08685 PF04545 Sigma-70, region 4 LVQ62_08690 PF01923 Cobalamin adenosyltransferase LVQ62_08700 PF01939 Endonuclease NucS LVQ62_08705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LVQ62_08705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LVQ62_08715 PF03741 Integral membrane protein TerC family LVQ62_08725 PF02803 Thiolase, C-terminal domain LVQ62_08725 PF00108 Thiolase, N-terminal domain LVQ62_08735 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_08750 PF09900 Predicted membrane protein (DUF2127) LVQ62_08755 PF05524 PEP-utilising enzyme, N-terminal LVQ62_08755 PF00391 PEP-utilising enzyme, mobile domain LVQ62_08755 PF02896 PEP-utilising enzyme, TIM barrel domain LVQ62_08760 PF00381 PTS HPr component phosphorylation site LVQ62_08765 PF02378 Phosphotransferase system, EIIC LVQ62_08765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LVQ62_08770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LVQ62_08770 PF02378 Phosphotransferase system, EIIC LVQ62_08770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LVQ62_08775 PF00294 pfkB family carbohydrate kinase LVQ62_08780 PF00455 DeoR C terminal sensor domain LVQ62_08780 PF08220 DeoR-like helix-turn-helix domain LVQ62_08785 PF02310 B12 binding domain LVQ62_08785 PF01642 Methylmalonyl-CoA mutase LVQ62_08820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LVQ62_08820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LVQ62_08820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LVQ62_08820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LVQ62_08825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LVQ62_08825 PF02806 Alpha amylase, C-terminal all-beta domain LVQ62_08825 PF00128 Alpha amylase, catalytic domain LVQ62_08830 PF00128 Alpha amylase, catalytic domain LVQ62_08830 PF16657 Maltogenic Amylase, C-terminal domain LVQ62_08835 PF11896 Domain of unknown function (DUF3416) LVQ62_08840 PF11897 Protein of unknown function (DUF3417) LVQ62_08840 PF00343 Carbohydrate phosphorylase LVQ62_08845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LVQ62_08845 PF00205 Thiamine pyrophosphate enzyme, central domain LVQ62_08845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LVQ62_08850 PF01645 Conserved region in glutamate synthase LVQ62_08855 PF06912 Protein of unknown function (DUF1275) LVQ62_08880 PF00128 Alpha amylase, catalytic domain LVQ62_08880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LVQ62_08895 PF01012 Electron transfer flavoprotein domain LVQ62_08900 PF00766 Electron transfer flavoprotein FAD-binding domain LVQ62_08900 PF01012 Electron transfer flavoprotein domain LVQ62_08910 PF01243 Pyridoxamine 5'-phosphate oxidase LVQ62_08920 PF00266 Aminotransferase class-V LVQ62_08945 PF12826 Helix-hairpin-helix motif LVQ62_08945 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LVQ62_08945 PF00533 BRCA1 C Terminus (BRCT) domain LVQ62_08945 PF01653 NAD-dependent DNA ligase adenylation domain LVQ62_08945 PF03120 NAD-dependent DNA ligase OB-fold domain LVQ62_08955 PF00106 short chain dehydrogenase LVQ62_08960 PF00378 Enoyl-CoA hydratase/isomerase LVQ62_08970 PF02686 Glu-tRNAGln amidotransferase C subunit LVQ62_08975 PF01425 Amidase LVQ62_08980 PF02934 GatB/GatE catalytic domain LVQ62_08980 PF02637 GatB domain LVQ62_08985 PF00067 Cytochrome P450 LVQ62_08990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LVQ62_09010 PF07690 Major Facilitator Superfamily LVQ62_09020 PF00920 Dehydratase family LVQ62_09025 PF00005 ABC transporter LVQ62_09040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LVQ62_09040 PF00205 Thiamine pyrophosphate enzyme, central domain LVQ62_09040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LVQ62_09045 PF10369 Small subunit of acetolactate synthase LVQ62_09050 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LVQ62_09050 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LVQ62_09055 PF00180 Isocitrate/isopropylmalate dehydrogenase LVQ62_09060 PF01063 Amino-transferase class IV LVQ62_09065 PF08502 LeuA allosteric (dimerisation) domain LVQ62_09065 PF00682 HMGL-like LVQ62_09070 PF01557 Fumarylacetoacetate (FAA) hydrolase family LVQ62_09075 PF01177 Asp/Glu/Hydantoin racemase LVQ62_09080 PF12706 Beta-lactamase superfamily domain LVQ62_09085 PF03725 3' exoribonuclease family, domain 2 LVQ62_09085 PF01138 3' exoribonuclease family, domain 1 LVQ62_09090 PF01725 Ham1 family LVQ62_09115 PF00364 Biotin-requiring enzyme LVQ62_09115 PF00561 alpha/beta hydrolase fold LVQ62_09130 PF00578 AhpC/TSA family LVQ62_09155 PF03631 Virulence factor BrkB LVQ62_09170 PF00929 Exonuclease LVQ62_09210 PF00239 Resolvase, N terminal domain LVQ62_09260 PF12848 ABC transporter LVQ62_09260 PF00005 ABC transporter LVQ62_09285 PF00128 Alpha amylase, catalytic domain LVQ62_09290 PF01152 Bacterial-like globin LVQ62_09295 PF00924 Mechanosensitive ion channel LVQ62_09300 PF02446 4-alpha-glucanotransferase LVQ62_09310 PF11838 ERAP1-like C-terminal domain LVQ62_09310 PF01433 Peptidase family M1 domain LVQ62_09315 PF01323 DSBA-like thioredoxin domain LVQ62_09320 PF02502 Ribose/Galactose Isomerase LVQ62_09325 PF13581 Histidine kinase-like ATPase domain LVQ62_09325 PF08448 PAS fold LVQ62_09325 PF13466 STAS domain LVQ62_09325 PF07228 Stage II sporulation protein E (SpoIIE) LVQ62_09345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVQ62_09345 PF05697 Bacterial trigger factor protein (TF) LVQ62_09345 PF05698 Bacterial trigger factor protein (TF) C-terminus LVQ62_09350 PF00574 Clp protease LVQ62_09355 PF00574 Clp protease LVQ62_09365 PF06689 ClpX C4-type zinc finger LVQ62_09365 PF10431 C-terminal, D2-small domain, of ClpB protein LVQ62_09365 PF07724 AAA domain (Cdc48 subfamily) LVQ62_09380 PF17863 AAA lid domain LVQ62_09380 PF07726 ATPase family associated with various cellular activities (AAA) LVQ62_09395 PF00133 tRNA synthetases class I (I, L, M and V) LVQ62_09395 PF08264 Anticodon-binding domain of tRNA LVQ62_09410 PF08264 Anticodon-binding domain of tRNA LVQ62_09410 PF00133 tRNA synthetases class I (I, L, M and V) LVQ62_09420 PF02875 Mur ligase family, glutamate ligase domain LVQ62_09420 PF08245 Mur ligase middle domain LVQ62_09430 PF02673 Bacitracin resistance protein BacA LVQ62_09435 PF00334 Nucleoside diphosphate kinase LVQ62_09445 PF00561 alpha/beta hydrolase fold LVQ62_09450 PF03994 Domain of Unknown Function (DUF350) LVQ62_09455 PF00312 Ribosomal protein S15 LVQ62_09475 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LVQ62_09475 PF06827 Zinc finger found in FPG and IleRS LVQ62_09475 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LVQ62_09490 PF13460 NAD(P)H-binding LVQ62_09490 PF11066 Protein of unknown function (DUF2867) LVQ62_09495 PF07690 Major Facilitator Superfamily LVQ62_09500 PF05173 Dihydrodipicolinate reductase, C-terminus LVQ62_09500 PF01113 Dihydrodipicolinate reductase, N-terminus LVQ62_09505 PF06983 3-demethylubiquinone-9 3-methyltransferase LVQ62_09525 PF00303 Thymidylate synthase LVQ62_09530 PF00701 Dihydrodipicolinate synthetase family LVQ62_09535 PF12706 Beta-lactamase superfamily domain LVQ62_09535 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LVQ62_09535 PF17770 Ribonuclease J C-terminal domain LVQ62_09565 PF00266 Aminotransferase class-V LVQ62_09580 PF17854 FtsK alpha domain LVQ62_09580 PF09397 Ftsk gamma domain LVQ62_09580 PF01580 FtsK/SpoIIIE family LVQ62_09600 PF18693 TRAM domain LVQ62_09600 PF00919 Uncharacterized protein family UPF0004 LVQ62_09600 PF04055 Radical SAM superfamily LVQ62_09605 PF01066 CDP-alcohol phosphatidyltransferase LVQ62_09610 PF02464 Competence-damaged protein LVQ62_09610 PF18146 Damage-inducible protein CinA KH domain LVQ62_09610 PF00994 Probable molybdopterin binding domain LVQ62_09620 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LVQ62_09620 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LVQ62_09625 PF08494 DEAD/H associated LVQ62_09625 PF00270 DEAD/DEAH box helicase LVQ62_09625 PF00271 Helicase conserved C-terminal domain LVQ62_09630 PF04371 Porphyromonas-type peptidyl-arginine deiminase LVQ62_09635 PF00795 Carbon-nitrogen hydrolase LVQ62_09645 PF08379 Bacterial transglutaminase-like N-terminal region LVQ62_09645 PF01841 Transglutaminase-like superfamily LVQ62_09650 PF00154 recA bacterial DNA recombination protein LVQ62_09655 PF02631 RecX family LVQ62_09660 PF01810 LysE type translocator LVQ62_09665 PF02913 FAD linked oxidases, C-terminal domain LVQ62_09665 PF01565 FAD binding domain LVQ62_09675 PF07690 Major Facilitator Superfamily LVQ62_09685 PF07690 Major Facilitator Superfamily LVQ62_09720 PF01678 Diaminopimelate epimerase LVQ62_09725 PF05175 Methyltransferase small domain LVQ62_09735 PF16360 GTP-binding GTPase Middle Region LVQ62_09735 PF01926 50S ribosome-binding GTPase LVQ62_09735 PF13167 GTP-binding GTPase N-terminal LVQ62_09745 PF13307 Helicase C-terminal domain LVQ62_09760 PF01649 Ribosomal protein S20 LVQ62_09770 PF02645 Uncharacterised protein, DegV family COG1307 LVQ62_09775 PF17674 HHH domain LVQ62_09775 PF00575 S1 RNA binding domain LVQ62_09775 PF09371 Tex-like protein N-terminal domain LVQ62_09775 PF16921 Tex protein YqgF-like domain LVQ62_09780 PF03099 Biotin/lipoate A/B protein ligase family LVQ62_09780 PF12706 Beta-lactamase superfamily domain LVQ62_09785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVQ62_09785 PF03466 LysR substrate binding domain LVQ62_09790 PF02146 Sir2 family LVQ62_09795 PF00717 Peptidase S24-like LVQ62_09795 PF01726 LexA DNA binding domain LVQ62_09805 PF03477 ATP cone domain LVQ62_09810 PF08471 Class II vitamin B12-dependent ribonucleotide reductase LVQ62_09810 PF02867 Ribonucleotide reductase, barrel domain LVQ62_09840 PF01384 Phosphate transporter family LVQ62_09865 PF13614 AAA domain LVQ62_09875 PF13439 Glycosyltransferase Family 4 LVQ62_09875 PF00534 Glycosyl transferases group 1 LVQ62_09910 PF03102 NeuB family LVQ62_09910 PF08666 SAF domain LVQ62_09915 PF02348 Cytidylyltransferase LVQ62_09930 PF01370 NAD dependent epimerase/dehydratase family LVQ62_09940 PF14602 Hexapeptide repeat of succinyl-transferase LVQ62_09940 PF12804 MobA-like NTP transferase domain LVQ62_09940 PF00132 Bacterial transferase hexapeptide (six repeats) LVQ62_09955 PF08241 Methyltransferase domain LVQ62_09965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LVQ62_09965 PF01842 ACT domain LVQ62_09965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LVQ62_09970 PF00067 Cytochrome P450 LVQ62_09970 PF00258 Flavodoxin LVQ62_09970 PF00667 FAD binding domain LVQ62_09970 PF00175 Oxidoreductase NAD-binding domain LVQ62_09975 PF07728 AAA domain (dynein-related subfamily) LVQ62_09975 PF12102 Domain of unknown function (DUF3578) LVQ62_10005 PF04286 Protein of unknown function (DUF445) LVQ62_10010 PF01053 Cys/Met metabolism PLP-dependent enzyme LVQ62_10025 PF02834 LigT like Phosphoesterase LVQ62_10030 PF00270 DEAD/DEAH box helicase LVQ62_10030 PF11898 Domain of unknown function (DUF3418) LVQ62_10030 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LVQ62_10030 PF04408 Helicase associated domain (HA2) LVQ62_10030 PF00271 Helicase conserved C-terminal domain LVQ62_10040 PF01230 HIT domain LVQ62_10050 PF01367 5'-3' exonuclease, C-terminal SAM fold LVQ62_10050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LVQ62_10050 PF00476 DNA polymerase family A LVQ62_10050 PF09281 Taq polymerase, exonuclease LVQ62_10060 PF02657 Fe-S metabolism associated domain LVQ62_10065 PF00581 Rhodanese-like domain LVQ62_10095 PF00561 alpha/beta hydrolase fold LVQ62_10100 PF00582 Universal stress protein family LVQ62_10105 PF04539 Sigma-70 region 3 LVQ62_10105 PF00140 Sigma-70 factor, region 1.2 LVQ62_10105 PF04542 Sigma-70 region 2 LVQ62_10105 PF04545 Sigma-70, region 4 LVQ62_10120 PF17863 AAA lid domain LVQ62_10120 PF07726 ATPase family associated with various cellular activities (AAA) LVQ62_10130 PF01795 MraW methylase family LVQ62_10140 PF03717 Penicillin-binding Protein dimerisation domain LVQ62_10140 PF00905 Penicillin binding protein transpeptidase domain LVQ62_10145 PF01225 Mur ligase family, catalytic domain LVQ62_10145 PF02875 Mur ligase family, glutamate ligase domain LVQ62_10145 PF08245 Mur ligase middle domain LVQ62_10150 PF00953 Glycosyl transferase family 4 LVQ62_10150 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LVQ62_10155 PF02875 Mur ligase family, glutamate ligase domain LVQ62_10155 PF08245 Mur ligase middle domain LVQ62_10160 PF01098 Cell cycle protein LVQ62_10165 PF04101 Glycosyltransferase family 28 C-terminal domain LVQ62_10165 PF03033 Glycosyltransferase family 28 N-terminal domain LVQ62_10170 PF02875 Mur ligase family, glutamate ligase domain LVQ62_10170 PF01225 Mur ligase family, catalytic domain LVQ62_10170 PF08245 Mur ligase middle domain LVQ62_10175 PF12327 FtsZ family, C-terminal domain LVQ62_10175 PF00091 Tubulin/FtsZ family, GTPase domain LVQ62_10180 PF02578 Multi-copper polyphenol oxidoreductase laccase LVQ62_10185 PF01168 Alanine racemase, N-terminal domain LVQ62_10190 PF04472 Cell division protein SepF LVQ62_10215 PF01258 Prokaryotic dksA/traR C4-type zinc finger LVQ62_10220 PF01252 Signal peptidase (SPase) II LVQ62_10225 PF00849 RNA pseudouridylate synthase LVQ62_10235 PF07733 Bacterial DNA polymerase III alpha NTPase domain LVQ62_10235 PF14579 Helix-hairpin-helix motif LVQ62_10235 PF02811 PHP domain LVQ62_10235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LVQ62_10240 PF00326 Prolyl oligopeptidase family LVQ62_10240 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LVQ62_10245 PF13382 Adenine deaminase C-terminal domain LVQ62_10245 PF01979 Amidohydrolase family LVQ62_10265 PF03176 MMPL family LVQ62_10280 PF03951 Glutamine synthetase, beta-Grasp domain LVQ62_10280 PF00120 Glutamine synthetase, catalytic domain LVQ62_10295 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LVQ62_10295 PF04055 Radical SAM superfamily LVQ62_10300 PF00857 Isochorismatase family LVQ62_10305 PF03099 Biotin/lipoate A/B protein ligase family LVQ62_10310 PF00285 Citrate synthase, C-terminal domain LVQ62_10320 PF00069 Protein kinase domain LVQ62_10320 PF13360 PQQ-like domain LVQ62_10335 PF00005 ABC transporter LVQ62_10340 PF08338 Domain of unknown function (DUF1731) LVQ62_10340 PF01370 NAD dependent epimerase/dehydratase family LVQ62_10345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LVQ62_10345 PF00364 Biotin-requiring enzyme LVQ62_10345 PF02817 e3 binding domain LVQ62_10355 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_10355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVQ62_10360 PF00883 Cytosol aminopeptidase family, catalytic domain LVQ62_10360 PF02789 Cytosol aminopeptidase family, N-terminal domain LVQ62_10365 PF08669 Glycine cleavage T-protein C-terminal barrel domain LVQ62_10365 PF01571 Aminomethyltransferase folate-binding domain LVQ62_10375 PF03949 Malic enzyme, NAD binding domain LVQ62_10375 PF00390 Malic enzyme, N-terminal domain LVQ62_10385 PF11241 Protein of unknown function (DUF3043) LVQ62_10390 PF07687 Peptidase dimerisation domain LVQ62_10390 PF01546 Peptidase family M20/M25/M40 LVQ62_10395 PF13409 Glutathione S-transferase, N-terminal domain LVQ62_10405 PF02685 Glucokinase LVQ62_10405 PF01380 SIS domain LVQ62_10405 PF01418 Helix-turn-helix domain, rpiR family LVQ62_10420 PF01521 Iron-sulphur cluster biosynthesis LVQ62_10425 PF00294 pfkB family carbohydrate kinase LVQ62_10430 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LVQ62_10435 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LVQ62_10440 PF00115 Cytochrome C and Quinol oxidase polypeptide I LVQ62_10445 PF12270 Cytochrome c oxidase subunit IV LVQ62_10450 PF00107 Zinc-binding dehydrogenase LVQ62_10450 PF16884 N-terminal domain of oxidoreductase LVQ62_10455 PF13631 Cytochrome b(N-terminal)/b6/petB LVQ62_10460 PF00355 Rieske [2Fe-2S] domain LVQ62_10465 PF00034 Cytochrome c LVQ62_10465 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LVQ62_10470 PF00510 Cytochrome c oxidase subunit III LVQ62_10480 PF02885 Glycosyl transferase family, helical bundle domain LVQ62_10480 PF00591 Glycosyl transferase family, a/b domain LVQ62_10490 PF01541 GIY-YIG catalytic domain LVQ62_10490 PF00929 Exonuclease LVQ62_10520 PF00480 ROK family LVQ62_10525 PF00480 ROK family LVQ62_10540 PF12146 Serine aminopeptidase, S33 LVQ62_10550 PF01906 Putative heavy-metal-binding LVQ62_10560 PF01474 Class-II DAHP synthetase family LVQ62_10565 PF03793 PASTA domain LVQ62_10565 PF00069 Protein kinase domain LVQ62_10575 PF00348 Polyprenyl synthetase LVQ62_10580 PF02219 Methylenetetrahydrofolate reductase LVQ62_10605 PF01751 Toprim domain LVQ62_10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_10605 PF00986 DNA gyrase B subunit, carboxyl terminus LVQ62_10605 PF00204 DNA gyrase B LVQ62_10610 PF00817 impB/mucB/samB family LVQ62_10610 PF11799 impB/mucB/samB family C-terminal domain LVQ62_10625 PF06470 SMC proteins Flexible Hinge Domain LVQ62_10625 PF02463 RecF/RecN/SMC N terminal domain LVQ62_10630 PF04978 Protein of unknown function (DUF664) LVQ62_10635 PF03989 DNA gyrase C-terminal domain, beta-propeller LVQ62_10635 PF00521 DNA gyrase/topoisomerase IV, subunit A LVQ62_10645 PF00232 Glycosyl hydrolase family 1 LVQ62_10650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LVQ62_10650 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LVQ62_10660 PF00356 Bacterial regulatory proteins, lacI family LVQ62_10670 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_10670 PF14785 Maltose transport system permease protein MalF P2 domain LVQ62_10680 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_10685 PF17912 MalK OB fold domain LVQ62_10685 PF00005 ABC transporter LVQ62_10690 PF00565 Staphylococcal nuclease homologue LVQ62_10700 PF01070 FMN-dependent dehydrogenase LVQ62_10705 PF00881 Nitroreductase family LVQ62_10710 PF13193 AMP-binding enzyme C-terminal domain LVQ62_10710 PF00501 AMP-binding enzyme LVQ62_10715 PF04542 Sigma-70 region 2 LVQ62_10715 PF08281 Sigma-70, region 4 LVQ62_10725 PF13302 Acetyltransferase (GNAT) domain LVQ62_10725 PF00027 Cyclic nucleotide-binding domain LVQ62_10740 PF00265 Thymidine kinase LVQ62_10745 PF07690 Major Facilitator Superfamily LVQ62_10755 PF00762 Ferrochelatase LVQ62_10760 PF00459 Inositol monophosphatase family LVQ62_10770 PF00692 dUTPase LVQ62_10785 PF02254 TrkA-N domain LVQ62_10785 PF02080 TrkA-C domain LVQ62_10790 PF02080 TrkA-C domain LVQ62_10790 PF02254 TrkA-N domain LVQ62_10795 PF13520 Amino acid permease LVQ62_10800 PF01938 TRAM domain LVQ62_10800 PF05958 tRNA (Uracil-5-)-methyltransferase LVQ62_10805 PF00694 Aconitase C-terminal domain LVQ62_10805 PF00330 Aconitase family (aconitate hydratase) LVQ62_10830 PF02780 Transketolase, C-terminal domain LVQ62_10830 PF02779 Transketolase, pyrimidine binding domain LVQ62_10830 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LVQ62_10835 PF00107 Zinc-binding dehydrogenase LVQ62_10835 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_10850 PF00574 Clp protease LVQ62_10855 PF00574 Clp protease LVQ62_10865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LVQ62_10870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LVQ62_10870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LVQ62_10870 PF00378 Enoyl-CoA hydratase/isomerase LVQ62_10875 PF02803 Thiolase, C-terminal domain LVQ62_10875 PF00108 Thiolase, N-terminal domain LVQ62_10900 PF01208 Uroporphyrinogen decarboxylase (URO-D) LVQ62_10910 PF00155 Aminotransferase class I and II LVQ62_10920 PF01593 Flavin containing amine oxidoreductase LVQ62_10925 PF01593 Flavin containing amine oxidoreductase LVQ62_10930 PF06778 Chlorite dismutase LVQ62_10935 PF01641 SelR domain LVQ62_10945 PF04679 ATP dependent DNA ligase C terminal region LVQ62_10945 PF13298 DNA polymerase Ligase (LigD) LVQ62_10945 PF01068 ATP dependent DNA ligase domain LVQ62_10975 PF03976 Polyphosphate kinase 2 (PPK2) LVQ62_11070 PF03631 Virulence factor BrkB LVQ62_11085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LVQ62_11085 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_11100 PF13247 4Fe-4S dicluster domain LVQ62_11100 PF12800 4Fe-4S binding domain LVQ62_11100 PF09163 Formate dehydrogenase N, transmembrane LVQ62_11115 PF02666 Phosphatidylserine decarboxylase LVQ62_11140 PF00144 Beta-lactamase LVQ62_11145 PF00144 Beta-lactamase LVQ62_11155 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_11160 PF00005 ABC transporter LVQ62_11160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVQ62_11165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVQ62_11165 PF00005 ABC transporter LVQ62_11170 PF01546 Peptidase family M20/M25/M40 LVQ62_11170 PF07687 Peptidase dimerisation domain LVQ62_11180 PF13378 Enolase C-terminal domain-like LVQ62_11180 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LVQ62_11190 PF17853 GGDEF-like domain LVQ62_11190 PF13556 PucR C-terminal helix-turn-helix domain LVQ62_11225 PF00248 Aldo/keto reductase family LVQ62_11230 PF04715 Anthranilate synthase component I, N terminal region LVQ62_11230 PF00425 chorismate binding enzyme LVQ62_11255 PF07690 Major Facilitator Superfamily LVQ62_11260 PF01624 MutS domain I LVQ62_11260 PF05188 MutS domain II LVQ62_11260 PF05192 MutS domain III LVQ62_11260 PF05190 MutS family domain IV LVQ62_11260 PF00488 MutS domain V LVQ62_11265 PF01713 Smr domain LVQ62_11265 PF00488 MutS domain V LVQ62_11280 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LVQ62_11285 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LVQ62_11295 PF12800 4Fe-4S binding domain LVQ62_11295 PF13247 4Fe-4S dicluster domain LVQ62_11320 PF01883 Iron-sulfur cluster assembly protein LVQ62_11320 PF10609 NUBPL iron-transfer P-loop NTPase LVQ62_11335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVQ62_11335 PF03466 LysR substrate binding domain LVQ62_11340 PF01790 Prolipoprotein diacylglyceryl transferase LVQ62_11355 PF00654 Voltage gated chloride channel LVQ62_11365 PF00392 Bacterial regulatory proteins, gntR family LVQ62_11365 PF07702 UTRA domain LVQ62_11370 PF16123 Hydroxyacylglutathione hydrolase C-terminus LVQ62_11370 PF00753 Metallo-beta-lactamase superfamily LVQ62_11375 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_11395 PF02469 Fasciclin domain LVQ62_11415 PF08241 Methyltransferase domain LVQ62_11420 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LVQ62_11425 PF03880 DbpA RNA binding domain LVQ62_11425 PF00271 Helicase conserved C-terminal domain LVQ62_11425 PF00270 DEAD/DEAH box helicase LVQ62_11450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LVQ62_11455 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_11460 PF12911 N-terminal TM domain of oligopeptide transport permease C LVQ62_11460 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_11465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVQ62_11465 PF00005 ABC transporter LVQ62_11470 PF00005 ABC transporter LVQ62_11470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVQ62_11480 PF01112 Asparaginase LVQ62_11490 PF00561 alpha/beta hydrolase fold LVQ62_11495 PF00582 Universal stress protein family LVQ62_11500 PF00083 Sugar (and other) transporter LVQ62_11510 PF00561 alpha/beta hydrolase fold LVQ62_11520 PF07690 Major Facilitator Superfamily LVQ62_11540 PF00144 Beta-lactamase LVQ62_11550 PF00196 Bacterial regulatory proteins, luxR family LVQ62_11550 PF00072 Response regulator receiver domain LVQ62_11555 PF01370 NAD dependent epimerase/dehydratase family LVQ62_11570 PF00106 short chain dehydrogenase LVQ62_11575 PF00171 Aldehyde dehydrogenase family LVQ62_11580 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LVQ62_11600 PF01022 Bacterial regulatory protein, arsR family LVQ62_11635 PF00106 short chain dehydrogenase LVQ62_11645 PF01261 Xylose isomerase-like TIM barrel LVQ62_11655 PF02627 Carboxymuconolactone decarboxylase family LVQ62_11665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LVQ62_11665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LVQ62_11665 PF03129 Anticodon binding domain LVQ62_11675 PF04075 F420H(2)-dependent quinone reductase LVQ62_11695 PF01230 HIT domain LVQ62_11700 PF01066 CDP-alcohol phosphatidyltransferase LVQ62_11705 PF03279 Bacterial lipid A biosynthesis acyltransferase LVQ62_11710 PF13439 Glycosyltransferase Family 4 LVQ62_11720 PF01680 SOR/SNZ family LVQ62_11725 PF00483 Nucleotidyl transferase LVQ62_11730 PF01757 Acyltransferase family LVQ62_11740 PF01757 Acyltransferase family LVQ62_11745 PF01757 Acyltransferase family LVQ62_11775 PF00534 Glycosyl transferases group 1 LVQ62_11775 PF13439 Glycosyltransferase Family 4 LVQ62_11805 PF08241 Methyltransferase domain LVQ62_11820 PF08544 GHMP kinases C terminal LVQ62_11820 PF00288 GHMP kinases N terminal domain LVQ62_11825 PF13580 SIS domain LVQ62_11835 PF01370 NAD dependent epimerase/dehydratase family LVQ62_11840 PF01209 ubiE/COQ5 methyltransferase family LVQ62_11845 PF00575 S1 RNA binding domain LVQ62_11850 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_11855 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_11860 PF13416 Bacterial extracellular solute-binding protein LVQ62_11865 PF00005 ABC transporter LVQ62_11865 PF17912 MalK OB fold domain LVQ62_11875 PF04229 GrpB protein LVQ62_11875 PF01121 Dephospho-CoA kinase LVQ62_11880 PF07690 Major Facilitator Superfamily LVQ62_11900 PF00271 Helicase conserved C-terminal domain LVQ62_11900 PF02151 UvrB/uvrC motif LVQ62_11900 PF12344 Ultra-violet resistance protein B LVQ62_11900 PF17757 UvrB interaction domain LVQ62_11900 PF04851 Type III restriction enzyme, res subunit LVQ62_11910 PF00202 Aminotransferase class-III LVQ62_11930 PF00877 NlpC/P60 family LVQ62_11935 PF00753 Metallo-beta-lactamase superfamily LVQ62_11940 PF17755 UvrA DNA-binding domain LVQ62_11940 PF00005 ABC transporter LVQ62_11940 PF17760 UvrA interaction domain LVQ62_11955 PF03668 P-loop ATPase protein family LVQ62_11960 PF01933 Uncharacterised protein family UPF0052 LVQ62_11965 PF02650 WhiA C-terminal HTH domain LVQ62_11965 PF14527 WhiA LAGLIDADG-like domain LVQ62_11965 PF10298 WhiA N-terminal LAGLIDADG-like domain LVQ62_11970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LVQ62_11970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LVQ62_11975 PF00162 Phosphoglycerate kinase LVQ62_11980 PF00121 Triosephosphate isomerase LVQ62_11985 PF03840 Preprotein translocase SecG subunit LVQ62_12005 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LVQ62_12015 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LVQ62_12015 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LVQ62_12020 PF00342 Phosphoglucose isomerase LVQ62_12025 PF00923 Transaldolase/Fructose-6-phosphate aldolase LVQ62_12030 PF00456 Transketolase, thiamine diphosphate binding domain LVQ62_12030 PF02779 Transketolase, pyrimidine binding domain LVQ62_12030 PF02780 Transketolase, C-terminal domain LVQ62_12035 PF01040 UbiA prenyltransferase family LVQ62_12040 PF02628 Cytochrome oxidase assembly protein LVQ62_12050 PF00005 ABC transporter LVQ62_12050 PF13732 Domain of unknown function (DUF4162) LVQ62_12065 PF01458 Uncharacterized protein family (UPF0051) LVQ62_12070 PF01458 Uncharacterized protein family (UPF0051) LVQ62_12075 PF00355 Rieske [2Fe-2S] domain LVQ62_12080 PF00005 ABC transporter LVQ62_12085 PF00266 Aminotransferase class-V LVQ62_12090 PF01592 NifU-like N terminal domain LVQ62_12095 PF01883 Iron-sulfur cluster assembly protein LVQ62_12120 PF04542 Sigma-70 region 2 LVQ62_12120 PF04545 Sigma-70, region 4 LVQ62_12145 PF07690 Major Facilitator Superfamily LVQ62_12150 PF04228 Putative neutral zinc metallopeptidase LVQ62_12155 PF16326 ABC transporter C-terminal domain LVQ62_12155 PF12848 ABC transporter LVQ62_12155 PF00005 ABC transporter LVQ62_12165 PF02104 SURF1 family LVQ62_12170 PF06463 Molybdenum Cofactor Synthesis C LVQ62_12170 PF04055 Radical SAM superfamily LVQ62_12195 PF02875 Mur ligase family, glutamate ligase domain LVQ62_12195 PF08245 Mur ligase middle domain LVQ62_12195 PF08443 RimK-like ATP-grasp domain LVQ62_12200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LVQ62_12200 PF02875 Mur ligase family, glutamate ligase domain LVQ62_12200 PF08245 Mur ligase middle domain LVQ62_12205 PF03575 Peptidase family S51 LVQ62_12220 PF00483 Nucleotidyl transferase LVQ62_12225 PF13439 Glycosyltransferase Family 4 LVQ62_12225 PF00534 Glycosyl transferases group 1 LVQ62_12235 PF00005 ABC transporter LVQ62_12250 PF00588 SpoU rRNA Methylase family LVQ62_12255 PF00296 Luciferase-like monooxygenase LVQ62_12265 PF01553 Acyltransferase LVQ62_12270 PF00270 DEAD/DEAH box helicase LVQ62_12270 PF00271 Helicase conserved C-terminal domain LVQ62_12270 PF00570 HRDC domain LVQ62_12270 PF16124 RecQ zinc-binding LVQ62_12270 PF09382 RQC domain LVQ62_12280 PF00817 impB/mucB/samB family LVQ62_12280 PF11799 impB/mucB/samB family C-terminal domain LVQ62_12290 PF14403 Circularly permuted ATP-grasp type 2 LVQ62_12290 PF04168 A predicted alpha-helical domain with a conserved ER motif. LVQ62_12295 PF01841 Transglutaminase-like superfamily LVQ62_12295 PF08379 Bacterial transglutaminase-like N-terminal region LVQ62_12300 PF00282 Pyridoxal-dependent decarboxylase conserved domain LVQ62_12325 PF04675 DNA ligase N terminus LVQ62_12325 PF01068 ATP dependent DNA ligase domain LVQ62_12325 PF04679 ATP dependent DNA ligase C terminal region LVQ62_12330 PF01546 Peptidase family M20/M25/M40 LVQ62_12330 PF07687 Peptidase dimerisation domain LVQ62_12345 PF00248 Aldo/keto reductase family LVQ62_12350 PF00296 Luciferase-like monooxygenase LVQ62_12370 PF01406 tRNA synthetases class I (C) catalytic domain LVQ62_12390 PF13508 Acetyltransferase (GNAT) domain LVQ62_12390 PF00583 Acetyltransferase (GNAT) family LVQ62_12440 PF05425 Copper resistance protein D LVQ62_12440 PF04234 CopC domain LVQ62_12440 PF13115 YtkA-like LVQ62_12445 PF00953 Glycosyl transferase family 4 LVQ62_12445 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LVQ62_12495 PF02492 CobW/HypB/UreG, nucleotide-binding domain LVQ62_12530 PF02796 Helix-turn-helix domain of resolvase LVQ62_12530 PF00239 Resolvase, N terminal domain LVQ62_12545 PF00857 Isochorismatase family LVQ62_12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LVQ62_12555 PF03466 LysR substrate binding domain LVQ62_12580 PF13397 RNA polymerase-binding protein LVQ62_12585 PF04186 FxsA cytoplasmic membrane protein LVQ62_12590 PF00535 Glycosyl transferase family 2 LVQ62_12595 PF00795 Carbon-nitrogen hydrolase LVQ62_12605 PF01037 Lrp/AsnC ligand binding domain LVQ62_12620 PF00270 DEAD/DEAH box helicase LVQ62_12620 PF08148 DSHCT (NUC185) domain LVQ62_12620 PF00271 Helicase conserved C-terminal domain LVQ62_12625 PF00902 Sec-independent protein translocase protein (TatC) LVQ62_12635 PF02416 mttA/Hcf106 family LVQ62_12645 PF13280 WYL domain LVQ62_12655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LVQ62_12665 PF03136 Pup-ligase protein LVQ62_12670 PF00664 ABC transporter transmembrane region LVQ62_12670 PF00005 ABC transporter LVQ62_12675 PF00664 ABC transporter transmembrane region LVQ62_12675 PF00005 ABC transporter LVQ62_12685 PF00227 Proteasome subunit LVQ62_12690 PF00227 Proteasome subunit LVQ62_12695 PF05639 Pup-like protein LVQ62_12700 PF03136 Pup-ligase protein LVQ62_12705 PF07859 alpha/beta hydrolase fold LVQ62_12725 PF01145 SPFH domain / Band 7 family LVQ62_12725 PF16200 C-terminal region of band_7 LVQ62_12740 PF04030 D-arabinono-1,4-lactone oxidase LVQ62_12740 PF01565 FAD binding domain LVQ62_12755 PF17758 Proteasomal ATPase OB N-terminal domain LVQ62_12755 PF16450 Proteasomal ATPase OB C-terminal domain LVQ62_12755 PF00004 ATPase family associated with various cellular activities (AAA) LVQ62_12760 PF08704 tRNA methyltransferase complex GCD14 subunit LVQ62_12765 PF02163 Peptidase family M50 LVQ62_12765 PF00571 CBS domain LVQ62_12775 PF13419 Haloacid dehalogenase-like hydrolase LVQ62_12790 PF05199 GMC oxidoreductase LVQ62_12790 PF00732 GMC oxidoreductase LVQ62_12805 PF00501 AMP-binding enzyme LVQ62_12805 PF13193 AMP-binding enzyme C-terminal domain LVQ62_12810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_12810 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_12810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_12820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_12820 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_12820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_12825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_12825 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_12825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_12835 PF01575 MaoC like domain LVQ62_12840 PF13419 Haloacid dehalogenase-like hydrolase LVQ62_12845 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_12845 PF00107 Zinc-binding dehydrogenase LVQ62_12860 PF00108 Thiolase, N-terminal domain LVQ62_12860 PF02803 Thiolase, C-terminal domain LVQ62_12870 PF01757 Acyltransferase family LVQ62_12880 PF00107 Zinc-binding dehydrogenase LVQ62_12880 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_12895 PF01300 Telomere recombination LVQ62_12910 PF00300 Histidine phosphatase superfamily (branch 1) LVQ62_12925 PF12320 Type 5 capsule protein repressor C-terminal domain LVQ62_12925 PF00149 Calcineurin-like phosphoesterase LVQ62_12930 PF13476 AAA domain LVQ62_12935 PF00155 Aminotransferase class I and II LVQ62_12940 PF02347 Glycine cleavage system P-protein LVQ62_12945 PF13411 MerR HTH family regulatory protein LVQ62_12950 PF02577 Bifunctional nuclease LVQ62_12955 PF00376 MerR family regulatory protein LVQ62_12960 PF16697 Inner membrane component of T3SS, cytoplasmic domain LVQ62_12965 PF01597 Glycine cleavage H-protein LVQ62_12970 PF05949 Bacterial protein of unknown function (DUF881) LVQ62_12975 PF06947 Protein of unknown function (DUF1290) LVQ62_12980 PF05949 Bacterial protein of unknown function (DUF881) LVQ62_12985 PF01066 CDP-alcohol phosphatidyltransferase LVQ62_12990 PF02634 FdhD/NarQ family LVQ62_12995 PF00384 Molybdopterin oxidoreductase LVQ62_12995 PF01568 Molydopterin dinucleotide binding domain LVQ62_13000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LVQ62_13000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LVQ62_13005 PF00875 DNA photolyase LVQ62_13005 PF03441 FAD binding domain of DNA photolyase LVQ62_13010 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LVQ62_13010 PF06974 Protein of unknown function (DUF1298) LVQ62_13020 PF13520 Amino acid permease LVQ62_13065 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LVQ62_13065 PF01926 50S ribosome-binding GTPase LVQ62_13070 PF01553 Acyltransferase LVQ62_13075 PF02224 Cytidylate kinase LVQ62_13080 PF02153 Prephenate dehydrogenase LVQ62_13085 PF00849 RNA pseudouridylate synthase LVQ62_13085 PF01479 S4 domain LVQ62_13090 PF04079 Segregation and condensation complex subunit ScpB LVQ62_13095 PF02616 Segregation and condensation protein ScpA LVQ62_13100 PF13614 AAA domain LVQ62_13105 PF00589 Phage integrase family LVQ62_13105 PF02899 Phage integrase, N-terminal SAM-like domain LVQ62_13120 PF13393 Histidyl-tRNA synthetase LVQ62_13120 PF03129 Anticodon binding domain LVQ62_13125 PF00753 Metallo-beta-lactamase superfamily LVQ62_13130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LVQ62_13135 PF03993 Domain of Unknown Function (DUF349) LVQ62_13140 PF02127 Aminopeptidase I zinc metalloprotease (M18) LVQ62_13150 PF04607 Region found in RelA / SpoT proteins LVQ62_13150 PF13291 ACT domain LVQ62_13150 PF02824 TGS domain LVQ62_13155 PF00156 Phosphoribosyl transferase domain LVQ62_13160 PF07549 SecD/SecF GG Motif LVQ62_13160 PF02355 Protein export membrane protein LVQ62_13165 PF07549 SecD/SecF GG Motif LVQ62_13165 PF02355 Protein export membrane protein LVQ62_13180 PF07499 RuvA, C-terminal domain LVQ62_13180 PF01330 RuvA N terminal domain LVQ62_13185 PF02075 Crossover junction endodeoxyribonuclease RuvC LVQ62_13190 PF01709 Transcriptional regulator LVQ62_13195 PF01174 SNO glutamine amidotransferase family LVQ62_13210 PF17863 AAA lid domain LVQ62_13210 PF01078 Magnesium chelatase, subunit ChlI LVQ62_13220 PF00005 ABC transporter LVQ62_13225 PF00950 ABC 3 transport family LVQ62_13235 PF00005 ABC transporter LVQ62_13240 PF00476 DNA polymerase family A LVQ62_13240 PF01367 5'-3' exonuclease, C-terminal SAM fold LVQ62_13240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LVQ62_13245 PF03061 Thioesterase superfamily LVQ62_13250 PF00583 Acetyltransferase (GNAT) family LVQ62_13255 PF00005 ABC transporter LVQ62_13260 PF00005 ABC transporter LVQ62_13260 PF12399 Branched-chain amino acid ATP-binding cassette transporter LVQ62_13265 PF11862 Domain of unknown function (DUF3382) LVQ62_13265 PF02653 Branched-chain amino acid transport system / permease component LVQ62_13270 PF02653 Branched-chain amino acid transport system / permease component LVQ62_13275 PF13458 Periplasmic binding protein LVQ62_13280 PF03861 ANTAR domain LVQ62_13280 PF00072 Response regulator receiver domain LVQ62_13295 PF00288 GHMP kinases N terminal domain LVQ62_13295 PF10509 Galactokinase galactose-binding signature LVQ62_13295 PF08544 GHMP kinases C terminal LVQ62_13300 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LVQ62_13300 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LVQ62_13305 PF08220 DeoR-like helix-turn-helix domain LVQ62_13305 PF00455 DeoR C terminal sensor domain LVQ62_13310 PF00474 Sodium:solute symporter family LVQ62_13325 PF00224 Pyruvate kinase, barrel domain LVQ62_13325 PF02887 Pyruvate kinase, alpha/beta domain LVQ62_13330 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LVQ62_13330 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_13340 PF01790 Prolipoprotein diacylglyceryl transferase LVQ62_13345 PF00290 Tryptophan synthase alpha chain LVQ62_13350 PF00291 Pyridoxal-phosphate dependent enzyme LVQ62_13355 PF00218 Indole-3-glycerol phosphate synthase LVQ62_13370 PF00425 chorismate binding enzyme LVQ62_13370 PF04715 Anthranilate synthase component I, N terminal region LVQ62_13375 PF01502 Phosphoribosyl-AMP cyclohydrolase LVQ62_13390 PF00072 Response regulator receiver domain LVQ62_13390 PF00486 Transcriptional regulatory protein, C terminal LVQ62_13395 PF13493 Domain of unknown function (DUF4118) LVQ62_13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_13395 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_13395 PF02702 Osmosensitive K+ channel His kinase sensor domain LVQ62_13395 PF00582 Universal stress protein family LVQ62_13400 PF02669 K+-transporting ATPase, c chain LVQ62_13420 PF00144 Beta-lactamase LVQ62_13425 PF07724 AAA domain (Cdc48 subfamily) LVQ62_13425 PF06689 ClpX C4-type zinc finger LVQ62_13425 PF10431 C-terminal, D2-small domain, of ClpB protein LVQ62_13430 PF00005 ABC transporter LVQ62_13430 PF00664 ABC transporter transmembrane region LVQ62_13435 PF00005 ABC transporter LVQ62_13435 PF00664 ABC transporter transmembrane region LVQ62_13445 PF00977 Histidine biosynthesis protein LVQ62_13460 PF01634 ATP phosphoribosyltransferase LVQ62_13460 PF08029 HisG, C-terminal domain LVQ62_13465 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LVQ62_13470 PF00885 6,7-dimethyl-8-ribityllumazine synthase LVQ62_13475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LVQ62_13475 PF00925 GTP cyclohydrolase II LVQ62_13480 PF04973 Nicotinamide mononucleotide transporter LVQ62_13485 PF00677 Lumazine binding domain LVQ62_13490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LVQ62_13490 PF01872 RibD C-terminal domain LVQ62_13495 PF00834 Ribulose-phosphate 3 epimerase family LVQ62_13500 PF01029 NusB family LVQ62_13500 PF01189 16S rRNA methyltransferase RsmB/F LVQ62_13505 PF02911 Formyl transferase, C-terminal domain LVQ62_13505 PF00551 Formyl transferase LVQ62_13510 PF01327 Polypeptide deformylase LVQ62_13520 PF01965 DJ-1/PfpI family LVQ62_13525 PF17764 3′ DNA-binding domain (3′BD) LVQ62_13530 PF02773 S-adenosylmethionine synthetase, C-terminal domain LVQ62_13530 PF02772 S-adenosylmethionine synthetase, central domain LVQ62_13530 PF00438 S-adenosylmethionine synthetase, N-terminal domain LVQ62_13535 PF04127 DNA / pantothenate metabolism flavoprotein LVQ62_13535 PF02441 Flavoprotein LVQ62_13540 PF01192 RNA polymerase Rpb6 LVQ62_13545 PF00625 Guanylate kinase LVQ62_13555 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LVQ62_13565 PF00117 Glutamine amidotransferase class-I LVQ62_13565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LVQ62_13570 PF01979 Amidohydrolase family LVQ62_13580 PF00156 Phosphoribosyl transferase domain LVQ62_13590 PF01029 NusB family LVQ62_13595 PF01132 Elongation factor P (EF-P) OB domain LVQ62_13595 PF08207 Elongation factor P (EF-P) KOW-like domain LVQ62_13595 PF09285 Elongation factor P, C-terminal LVQ62_13600 PF01761 3-dehydroquinate synthase LVQ62_13605 PF01202 Shikimate kinase LVQ62_13610 PF01264 Chorismate synthase LVQ62_13615 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LVQ62_13615 PF01488 Shikimate / quinate 5-dehydrogenase LVQ62_13615 PF08501 Shikimate dehydrogenase substrate binding domain LVQ62_13625 PF03652 Holliday junction resolvase LVQ62_13630 PF02272 DHHA1 domain LVQ62_13630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LVQ62_13630 PF01411 tRNA synthetases class II (A) LVQ62_13635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVQ62_13635 PF00005 ABC transporter LVQ62_13640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LVQ62_13640 PF00005 ABC transporter LVQ62_13645 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_13655 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_13655 PF12911 N-terminal TM domain of oligopeptide transport permease C LVQ62_13660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LVQ62_13670 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_13670 PF12911 N-terminal TM domain of oligopeptide transport permease C LVQ62_13675 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_13685 PF00004 ATPase family associated with various cellular activities (AAA) LVQ62_13685 PF16193 AAA C-terminal domain LVQ62_13685 PF12002 MgsA AAA+ ATPase C terminal LVQ62_13695 PF02938 GAD domain LVQ62_13695 PF00152 tRNA synthetases class II (D, K and N) LVQ62_13695 PF01336 OB-fold nucleic acid binding domain LVQ62_13710 PF00764 Arginosuccinate synthase LVQ62_13725 PF00155 Aminotransferase class I and II LVQ62_13730 PF00293 NUDIX domain LVQ62_13735 PF06418 CTP synthase N-terminus LVQ62_13735 PF00117 Glutamine amidotransferase class-I LVQ62_13740 PF02463 RecF/RecN/SMC N terminal domain LVQ62_13745 PF01513 ATP-NAD kinase LVQ62_13750 PF01728 FtsJ-like methyltransferase LVQ62_13750 PF01479 S4 domain LVQ62_13770 PF18407 GCN5-related N-acetyltransferase like domain LVQ62_13770 PF13344 Haloacid dehalogenase-like hydrolase LVQ62_13805 PF00579 tRNA synthetases class I (W and Y) LVQ62_13810 PF02245 Methylpurine-DNA glycosylase (MPG) LVQ62_13815 PF14698 Argininosuccinate lyase C-terminal LVQ62_13815 PF00206 Lyase LVQ62_13820 PF01316 Arginine repressor, DNA binding domain LVQ62_13820 PF02863 Arginine repressor, C-terminal domain LVQ62_13835 PF00696 Amino acid kinase family LVQ62_13840 PF01960 ArgJ family LVQ62_13845 PF01118 Semialdehyde dehydrogenase, NAD binding domain LVQ62_13845 PF02774 Semialdehyde dehydrogenase, dimerisation domain LVQ62_13855 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LVQ62_13855 PF01409 tRNA synthetases class II core domain (F) LVQ62_13860 PF08032 RNA 2'-O ribose methyltransferase substrate binding LVQ62_13860 PF00588 SpoU rRNA Methylase family LVQ62_13865 PF00453 Ribosomal protein L20 LVQ62_13870 PF01632 Ribosomal protein L35 LVQ62_13875 PF05198 Translation initiation factor IF-3, N-terminal domain LVQ62_13875 PF00707 Translation initiation factor IF-3, C-terminal domain LVQ62_13890 PF01475 Ferric uptake regulator family LVQ62_13895 PF00199 Catalase LVQ62_13895 PF06628 Catalase-related immune-responsive LVQ62_13905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LVQ62_13905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LVQ62_13910 PF01232 Mannitol dehydrogenase Rossmann domain LVQ62_13910 PF08125 Mannitol dehydrogenase C-terminal domain LVQ62_13915 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_13920 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_13935 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_13935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVQ62_13940 PF03239 Iron permease FTR1 family LVQ62_13950 PF04261 Dyp-type peroxidase family LVQ62_13950 PF10518 TAT (twin-arginine translocation) pathway signal sequence LVQ62_13985 PF00977 Histidine biosynthesis protein LVQ62_13990 PF00117 Glutamine amidotransferase class-I LVQ62_14000 PF00475 Imidazoleglycerol-phosphate dehydratase LVQ62_14005 PF00155 Aminotransferase class I and II LVQ62_14010 PF00815 Histidinol dehydrogenase LVQ62_14015 PF01258 Prokaryotic dksA/traR C4-type zinc finger LVQ62_14020 PF00245 Alkaline phosphatase LVQ62_14025 PF08335 GlnD PII-uridylyltransferase LVQ62_14025 PF03710 Glutamate-ammonia ligase adenylyltransferase LVQ62_14030 PF03951 Glutamine synthetase, beta-Grasp domain LVQ62_14030 PF00120 Glutamine synthetase, catalytic domain LVQ62_14035 PF02548 Ketopantoate hydroxymethyltransferase LVQ62_14040 PF07690 Major Facilitator Superfamily LVQ62_14050 PF00557 Metallopeptidase family M24 LVQ62_14055 PF00480 ROK family LVQ62_14080 PF00571 CBS domain LVQ62_14080 PF00478 IMP dehydrogenase / GMP reductase domain LVQ62_14095 PF00575 S1 RNA binding domain LVQ62_14095 PF00773 RNB domain LVQ62_14125 PF03883 Peroxide stress protein YaaA LVQ62_14130 PF02040 Arsenical pump membrane protein LVQ62_14155 PF01784 NIF3 (NGG1p interacting factor 3) LVQ62_14175 PF00578 AhpC/TSA family LVQ62_14180 PF11253 Protein of unknown function (DUF3052) LVQ62_14185 PF17831 Pyruvate dehydrogenase E1 component middle domain LVQ62_14185 PF00456 Transketolase, thiamine diphosphate binding domain LVQ62_14190 PF03009 Glycerophosphoryl diester phosphodiesterase family LVQ62_14195 PF17853 GGDEF-like domain LVQ62_14195 PF13556 PucR C-terminal helix-turn-helix domain LVQ62_14205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LVQ62_14205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LVQ62_14210 PF00550 Phosphopantetheine attachment site LVQ62_14215 PF00109 Beta-ketoacyl synthase, N-terminal domain LVQ62_14215 PF02801 Beta-ketoacyl synthase, C-terminal domain LVQ62_14220 PF01039 Carboxyl transferase domain LVQ62_14230 PF13399 LytR cell envelope-related transcriptional attenuator LVQ62_14230 PF03816 Cell envelope-related transcriptional attenuator domain LVQ62_14250 PF02557 D-alanyl-D-alanine carboxypeptidase LVQ62_14280 PF00672 HAMP domain LVQ62_14280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_14280 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_14285 PF00072 Response regulator receiver domain LVQ62_14285 PF00486 Transcriptional regulatory protein, C terminal LVQ62_14310 PF04542 Sigma-70 region 2 LVQ62_14310 PF04539 Sigma-70 region 3 LVQ62_14310 PF04545 Sigma-70, region 4 LVQ62_14315 PF01979 Amidohydrolase family LVQ62_14320 PF01741 Large-conductance mechanosensitive channel, MscL LVQ62_14325 PF00654 Voltage gated chloride channel LVQ62_14330 PF00378 Enoyl-CoA hydratase/isomerase LVQ62_14335 PF13193 AMP-binding enzyme C-terminal domain LVQ62_14335 PF00501 AMP-binding enzyme LVQ62_14340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LVQ62_14340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LVQ62_14345 PF00501 AMP-binding enzyme LVQ62_14345 PF13193 AMP-binding enzyme C-terminal domain LVQ62_14355 PF01047 MarR family LVQ62_14360 PF07690 Major Facilitator Superfamily LVQ62_14365 PF00970 Oxidoreductase FAD-binding domain LVQ62_14365 PF00111 2Fe-2S iron-sulfur cluster binding domain LVQ62_14375 PF00355 Rieske [2Fe-2S] domain LVQ62_14390 PF00775 Dioxygenase LVQ62_14390 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LVQ62_14395 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal LVQ62_14395 PF00775 Dioxygenase LVQ62_14400 PF10397 Adenylosuccinate lyase C-terminus LVQ62_14400 PF00206 Lyase LVQ62_14405 PF02627 Carboxymuconolactone decarboxylase family LVQ62_14410 PF01494 FAD binding domain LVQ62_14430 PF00437 Type II/IV secretion system protein LVQ62_14435 PF13614 AAA domain LVQ62_14465 PF13180 PDZ domain LVQ62_14465 PF17820 PDZ domain LVQ62_14480 PF01047 MarR family LVQ62_14500 PF08240 Alcohol dehydrogenase GroES-like domain LVQ62_14500 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LVQ62_14510 PF00732 GMC oxidoreductase LVQ62_14510 PF05199 GMC oxidoreductase LVQ62_14530 PF00723 Glycosyl hydrolases family 15 LVQ62_14535 PF00106 short chain dehydrogenase LVQ62_14550 PF02909 Tetracyclin repressor-like, C-terminal domain LVQ62_14550 PF00440 Bacterial regulatory proteins, tetR family LVQ62_14585 PF03060 Nitronate monooxygenase LVQ62_14590 PF01966 HD domain LVQ62_14590 PF13286 Phosphohydrolase-associated domain LVQ62_14605 PF00581 Rhodanese-like domain LVQ62_14610 PF01207 Dihydrouridine synthase (Dus) LVQ62_14615 PF03358 NADPH-dependent FMN reductase LVQ62_14620 PF00296 Luciferase-like monooxygenase LVQ62_14625 PF00196 Bacterial regulatory proteins, luxR family LVQ62_14625 PF00072 Response regulator receiver domain LVQ62_14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_14630 PF07730 Histidine kinase LVQ62_14640 PF00005 ABC transporter LVQ62_14655 PF00583 Acetyltransferase (GNAT) family LVQ62_14660 PF01255 Putative undecaprenyl diphosphate synthase LVQ62_14665 PF02565 Recombination protein O C terminal LVQ62_14665 PF11967 Recombination protein O N terminal LVQ62_14675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_14675 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_14675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_14680 PF02515 CoA-transferase family III LVQ62_14690 PF00067 Cytochrome P450 LVQ62_14695 PF00202 Aminotransferase class-III LVQ62_14700 PF08502 LeuA allosteric (dimerisation) domain LVQ62_14700 PF00682 HMGL-like LVQ62_14705 PF00884 Sulfatase LVQ62_14705 PF16347 Domain of unknown function (DUF4976) LVQ62_14710 PF01844 HNH endonuclease LVQ62_14715 PF00561 alpha/beta hydrolase fold LVQ62_14735 PF05175 Methyltransferase small domain LVQ62_14740 PF07650 KH domain LVQ62_14740 PF01926 50S ribosome-binding GTPase LVQ62_14745 PF00571 CBS domain LVQ62_14745 PF03471 Transporter associated domain LVQ62_14745 PF01595 Cyclin M transmembrane N-terminal domain LVQ62_14750 PF02130 Uncharacterized protein family UPF0054 LVQ62_14755 PF02562 PhoH-like protein LVQ62_14760 PF04452 RNA methyltransferase LVQ62_14765 PF00684 DnaJ central domain LVQ62_14765 PF01556 DnaJ C terminal domain LVQ62_14765 PF00226 DnaJ domain LVQ62_14770 PF01628 HrcA protein C terminal domain LVQ62_14770 PF08220 DeoR-like helix-turn-helix domain LVQ62_14785 PF02445 Quinolinate synthetase A protein LVQ62_14790 PF00890 FAD binding domain LVQ62_14790 PF02910 Fumarate reductase flavoprotein C-term LVQ62_14795 PF00890 FAD binding domain LVQ62_14795 PF02910 Fumarate reductase flavoprotein C-term LVQ62_14800 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LVQ62_14800 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LVQ62_14805 PF04055 Radical SAM superfamily LVQ62_14815 PF02390 Putative methyltransferase LVQ62_14820 PF00679 Elongation factor G C-terminus LVQ62_14820 PF00009 Elongation factor Tu GTP binding domain LVQ62_14820 PF06421 GTP-binding protein LepA C-terminus LVQ62_14830 PF07690 Major Facilitator Superfamily LVQ62_14840 PF00221 Aromatic amino acid lyase LVQ62_14845 PF01614 Bacterial transcriptional regulator LVQ62_14845 PF09339 IclR helix-turn-helix domain LVQ62_14850 PF00571 CBS domain LVQ62_14850 PF00005 ABC transporter LVQ62_14855 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_14860 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_14875 PF01274 Malate synthase LVQ62_14880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_14880 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_14880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_14885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_14885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_14885 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_14900 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_14900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_14900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_14905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_14905 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_14905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_14910 PF01022 Bacterial regulatory protein, arsR family LVQ62_14925 PF00248 Aldo/keto reductase family LVQ62_14945 PF00300 Histidine phosphatase superfamily (branch 1) LVQ62_14955 PF01467 Cytidylyltransferase-like LVQ62_14965 PF00535 Glycosyl transferase family 2 LVQ62_14970 PF00171 Aldehyde dehydrogenase family LVQ62_14980 PF00696 Amino acid kinase family LVQ62_14980 PF01472 PUA domain LVQ62_14985 PF09269 Domain of unknown function (DUF1967) LVQ62_14985 PF01926 50S ribosome-binding GTPase LVQ62_14985 PF01018 GTP1/OBG LVQ62_14990 PF01016 Ribosomal L27 protein LVQ62_14995 PF00829 Ribosomal prokaryotic L21 protein LVQ62_15000 PF10150 Ribonuclease E/G family LVQ62_15010 PF00535 Glycosyl transferase family 2 LVQ62_15030 PF00501 AMP-binding enzyme LVQ62_15035 PF06574 FAD synthetase LVQ62_15035 PF01687 Riboflavin kinase LVQ62_15040 PF03824 High-affinity nickel-transport protein LVQ62_15045 PF09142 tRNA Pseudouridine synthase II, C terminal LVQ62_15045 PF16198 tRNA pseudouridylate synthase B C-terminal domain LVQ62_15045 PF01509 TruB family pseudouridylate synthase (N terminal domain) LVQ62_15050 PF02033 Ribosome-binding factor A LVQ62_15060 PF00009 Elongation factor Tu GTP binding domain LVQ62_15060 PF00009 Elongation factor Tu GTP binding domain LVQ62_15060 PF11987 Translation-initiation factor 2 LVQ62_15060 PF04760 Translation initiation factor IF-2, N-terminal region LVQ62_15060 PF11987 Translation-initiation factor 2 LVQ62_15060 PF04760 Translation initiation factor IF-2, N-terminal region LVQ62_15070 PF13184 NusA-like KH domain LVQ62_15070 PF08529 NusA N-terminal domain LVQ62_15075 PF17384 RimP C-terminal SH3 domain LVQ62_15075 PF02576 RimP N-terminal domain LVQ62_15080 PF00528 Binding-protein-dependent transport system inner membrane component LVQ62_15085 PF00005 ABC transporter LVQ62_15095 PF00009 Elongation factor Tu GTP binding domain LVQ62_15100 PF01507 Phosphoadenosine phosphosulfate reductase family LVQ62_15110 PF01507 Phosphoadenosine phosphosulfate reductase family LVQ62_15120 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LVQ62_15120 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LVQ62_15130 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LVQ62_15150 PF03129 Anticodon binding domain LVQ62_15150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LVQ62_15150 PF04073 Aminoacyl-tRNA editing domain LVQ62_15155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_15155 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_15155 PF18158 Adaptive response protein AidB N-terminal domain LVQ62_15165 PF00809 Pterin binding enzyme LVQ62_15175 PF00583 Acetyltransferase (GNAT) family LVQ62_15190 PF17820 PDZ domain LVQ62_15190 PF02163 Peptidase family M50 LVQ62_15195 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LVQ62_15195 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LVQ62_15195 PF13288 DXP reductoisomerase C-terminal domain LVQ62_15220 PF00171 Aldehyde dehydrogenase family LVQ62_15225 PF00171 Aldehyde dehydrogenase family LVQ62_15230 PF03313 Serine dehydratase alpha chain LVQ62_15230 PF03315 Serine dehydratase beta chain LVQ62_15240 PF00202 Aminotransferase class-III LVQ62_15250 PF03435 Saccharopine dehydrogenase NADP binding domain LVQ62_15255 PF16177 Acetyl-coenzyme A synthetase N-terminus LVQ62_15255 PF13193 AMP-binding enzyme C-terminal domain LVQ62_15255 PF00501 AMP-binding enzyme LVQ62_15270 PF04055 Radical SAM superfamily LVQ62_15280 PF01765 Ribosome recycling factor LVQ62_15285 PF00696 Amino acid kinase family LVQ62_15290 PF00889 Elongation factor TS LVQ62_15295 PF00318 Ribosomal protein S2 LVQ62_15300 PF00155 Aminotransferase class I and II LVQ62_15310 PF01551 Peptidase family M23 LVQ62_15330 PF02899 Phage integrase, N-terminal SAM-like domain LVQ62_15330 PF00589 Phage integrase family LVQ62_15335 PF02481 DNA recombination-mediator protein A LVQ62_15335 PF17782 DprA winged helix domain LVQ62_15340 PF01078 Magnesium chelatase, subunit ChlI LVQ62_15340 PF13335 Magnesium chelatase, subunit ChlI C-terminal LVQ62_15345 PF02021 Uncharacterised protein family UPF0102 LVQ62_15355 PF10611 Protein of unknown function (DUF2469) LVQ62_15360 PF01351 Ribonuclease HII LVQ62_15365 PF10502 Signal peptidase, peptidase S26 LVQ62_15370 PF10502 Signal peptidase, peptidase S26 LVQ62_15375 PF01245 Ribosomal protein L19 LVQ62_15380 PF01746 tRNA (Guanine-1)-methyltransferase LVQ62_15385 PF05239 PRC-barrel domain LVQ62_15385 PF01782 RimM N-terminal domain LVQ62_15400 PF07690 Major Facilitator Superfamily LVQ62_15410 PF00886 Ribosomal protein S16 LVQ62_15415 PF02558 Ketopantoate reductase PanE/ApbA LVQ62_15415 PF08546 Ketopantoate reductase PanE/ApbA C terminal LVQ62_15430 PF00463 Isocitrate lyase family LVQ62_15435 PF01274 Malate synthase LVQ62_15440 PF00723 Glycosyl hydrolases family 15 LVQ62_15440 PF09137 Glucodextranase, domain N LVQ62_15450 PF01979 Amidohydrolase family LVQ62_15550 PF00589 Phage integrase family LVQ62_15550 PF02899 Phage integrase, N-terminal SAM-like domain LVQ62_15555 PF00448 SRP54-type protein, GTPase domain LVQ62_15555 PF02978 Signal peptide binding domain LVQ62_15555 PF02881 SRP54-type protein, helical bundle domain LVQ62_15570 PF01909 Nucleotidyltransferase domain LVQ62_15570 PF01966 HD domain LVQ62_15570 PF08335 GlnD PII-uridylyltransferase LVQ62_15575 PF00543 Nitrogen regulatory protein P-II LVQ62_15590 PF00005 ABC transporter LVQ62_15590 PF13732 Domain of unknown function (DUF4162) LVQ62_15600 PF07739 TipAS antibiotic-recognition domain LVQ62_15600 PF13411 MerR HTH family regulatory protein LVQ62_15605 PF00654 Voltage gated chloride channel LVQ62_15615 PF00106 short chain dehydrogenase LVQ62_15625 PF00723 Glycosyl hydrolases family 15 LVQ62_15640 PF00877 NlpC/P60 family LVQ62_15670 PF01053 Cys/Met metabolism PLP-dependent enzyme LVQ62_15675 PF00448 SRP54-type protein, GTPase domain LVQ62_15675 PF02881 SRP54-type protein, helical bundle domain LVQ62_15685 PF00144 Beta-lactamase LVQ62_15690 PF06470 SMC proteins Flexible Hinge Domain LVQ62_15690 PF02463 RecF/RecN/SMC N terminal domain LVQ62_15700 PF00072 Response regulator receiver domain LVQ62_15700 PF00196 Bacterial regulatory proteins, luxR family LVQ62_15715 PF00557 Metallopeptidase family M24 LVQ62_15725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LVQ62_15725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LVQ62_15725 PF06827 Zinc finger found in FPG and IleRS LVQ62_15730 PF00035 Double-stranded RNA binding motif LVQ62_15730 PF14622 Ribonuclease-III-like LVQ62_15735 PF01783 Ribosomal L32p protein family LVQ62_15740 PF02620 Large ribosomal RNA subunit accumulation protein YceD LVQ62_15745 PF01467 Cytidylyltransferase-like LVQ62_15755 PF17191 RecG wedge domain LVQ62_15755 PF00271 Helicase conserved C-terminal domain LVQ62_15755 PF00270 DEAD/DEAH box helicase LVQ62_15760 PF02734 DAK2 domain LVQ62_15760 PF13684 Dihydroxyacetone kinase family LVQ62_15765 PF00830 Ribosomal L28 family LVQ62_15775 PF02565 Recombination protein O C terminal LVQ62_15775 PF11967 Recombination protein O N terminal LVQ62_15800 PF00586 AIR synthase related protein, N-terminal domain LVQ62_15800 PF02769 AIR synthase related protein, C-terminal domain LVQ62_15815 PF07478 D-ala D-ala ligase C-terminus LVQ62_15815 PF01820 D-ala D-ala ligase N-terminus LVQ62_15820 PF01053 Cys/Met metabolism PLP-dependent enzyme LVQ62_15825 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LVQ62_15825 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LVQ62_15830 PF01553 Acyltransferase LVQ62_15830 PF00501 AMP-binding enzyme LVQ62_15835 PF12804 MobA-like NTP transferase domain LVQ62_15845 PF00216 Bacterial DNA-binding protein LVQ62_15850 PF00694 Aconitase C-terminal domain LVQ62_15855 PF00330 Aconitase family (aconitate hydratase) LVQ62_15860 PF09339 IclR helix-turn-helix domain LVQ62_15860 PF01614 Bacterial transcriptional regulator LVQ62_15900 PF00749 tRNA synthetases class I (E and Q), catalytic domain LVQ62_15910 PF02617 ATP-dependent Clp protease adaptor protein ClpS LVQ62_15915 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LVQ62_15915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LVQ62_15920 PF00857 Isochorismatase family LVQ62_15935 PF06271 RDD family LVQ62_15945 PF04851 Type III restriction enzyme, res subunit LVQ62_15970 PF00271 Helicase conserved C-terminal domain LVQ62_15970 PF00270 DEAD/DEAH box helicase LVQ62_15985 PF00390 Malic enzyme, N-terminal domain LVQ62_15985 PF03949 Malic enzyme, NAD binding domain LVQ62_16005 PF00440 Bacterial regulatory proteins, tetR family LVQ62_16005 PF16859 Tetracyclin repressor-like, C-terminal domain LVQ62_16010 PF07690 Major Facilitator Superfamily LVQ62_16015 PF00289 Biotin carboxylase, N-terminal domain LVQ62_16015 PF00364 Biotin-requiring enzyme LVQ62_16015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LVQ62_16015 PF00682 HMGL-like LVQ62_16015 PF02436 Conserved carboxylase domain LVQ62_16015 PF02785 Biotin carboxylase C-terminal domain LVQ62_16030 PF02467 Transcription factor WhiB LVQ62_16035 PF12282 Signal transduction histidine kinase LVQ62_16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_16035 PF07568 Histidine kinase LVQ62_16055 PF00171 Aldehyde dehydrogenase family LVQ62_16065 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LVQ62_16080 PF12728 Helix-turn-helix domain LVQ62_16095 PF07517 SecA DEAD-like domain LVQ62_16095 PF01043 SecA preprotein cross-linking domain LVQ62_16095 PF07516 SecA Wing and Scaffold domain LVQ62_16115 PF00196 Bacterial regulatory proteins, luxR family LVQ62_16115 PF00072 Response regulator receiver domain LVQ62_16120 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LVQ62_16120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LVQ62_16125 PF10646 Sporulation and spore germination LVQ62_16125 PF10647 Lipoprotein LpqB beta-propeller domain LVQ62_16130 PF00672 HAMP domain LVQ62_16130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_16130 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_16135 PF00072 Response regulator receiver domain LVQ62_16135 PF00486 Transcriptional regulatory protein, C terminal LVQ62_16140 PF05221 S-adenosyl-L-homocysteine hydrolase LVQ62_16140 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LVQ62_16165 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_16165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LVQ62_16170 PF03301 Tryptophan 2,3-dioxygenase LVQ62_16180 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LVQ62_16180 PF03966 Trm112p-like protein LVQ62_16185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LVQ62_16185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LVQ62_16185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LVQ62_16185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LVQ62_16220 PF02467 Transcription factor WhiB LVQ62_16225 PF01933 Uncharacterised protein family UPF0052 LVQ62_16230 PF01996 F420-0:Gamma-glutamyl ligase LVQ62_16230 PF00881 Nitroreductase family LVQ62_16260 PF03051 Peptidase C1-like family LVQ62_16275 PF16177 Acetyl-coenzyme A synthetase N-terminus LVQ62_16275 PF00501 AMP-binding enzyme LVQ62_16275 PF13193 AMP-binding enzyme C-terminal domain LVQ62_16280 PF00550 Phosphopantetheine attachment site LVQ62_16290 PF03102 NeuB family LVQ62_16290 PF08666 SAF domain LVQ62_16295 PF00535 Glycosyl transferase family 2 LVQ62_16325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LVQ62_16330 PF02719 Polysaccharide biosynthesis protein LVQ62_16345 PF02348 Cytidylyltransferase LVQ62_16355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LVQ62_16360 PF01144 Coenzyme A transferase LVQ62_16365 PF01144 Coenzyme A transferase LVQ62_16370 PF00005 ABC transporter LVQ62_16375 PF01061 ABC-2 type transporter LVQ62_16385 PF03816 Cell envelope-related transcriptional attenuator domain LVQ62_16395 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_16395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_16395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_16400 PF00731 AIR carboxylase LVQ62_16405 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LVQ62_16405 PF02222 ATP-grasp domain LVQ62_16415 PF00512 His Kinase A (phospho-acceptor) domain LVQ62_16415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LVQ62_16415 PF00672 HAMP domain LVQ62_16420 PF00072 Response regulator receiver domain LVQ62_16420 PF00486 Transcriptional regulatory protein, C terminal LVQ62_16425 PF00211 Adenylate and Guanylate cyclase catalytic domain LVQ62_16425 PF16701 Adenylate cyclase regulatory domain LVQ62_16430 PF01039 Carboxyl transferase domain LVQ62_16445 PF00999 Sodium/hydrogen exchanger family LVQ62_16455 PF02545 Maf-like protein LVQ62_16460 PF07690 Major Facilitator Superfamily LVQ62_16465 PF01039 Carboxyl transferase domain LVQ62_16470 PF02770 Acyl-CoA dehydrogenase, middle domain LVQ62_16470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LVQ62_16470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LVQ62_16475 PF09278 MerR, DNA binding LVQ62_16475 PF00376 MerR family regulatory protein LVQ62_16485 PF00474 Sodium:solute symporter family LVQ62_16505 PF04542 Sigma-70 region 2 LVQ62_16505 PF08281 Sigma-70, region 4 LVQ62_16510 PF00296 Luciferase-like monooxygenase LVQ62_16520 PF02586 SOS response associated peptidase (SRAP) LVQ62_16525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LVQ62_16530 PF03193 RsgA GTPase LVQ62_16540 PF00459 Inositol monophosphatase family LVQ62_16545 PF00202 Aminotransferase class-III LVQ62_16575 PF07992 Pyridine nucleotide-disulphide oxidoreductase LVQ62_16585 PF00498 FHA domain LVQ62_16585 PF00005 ABC transporter LVQ62_16585 PF01061 ABC-2 type transporter LVQ62_16590 PF01668 SmpB protein LVQ62_16595 PF01464 Transglycosylase SLT domain LVQ62_16595 PF10145 Phage-related minor tail protein LVQ62_16595 PF01551 Peptidase family M23 LVQ62_16600 PF18075 FtsX extracellular domain LVQ62_16600 PF02687 FtsX-like permease family LVQ62_16605 PF00005 ABC transporter LVQ62_16610 PF01910 Thiamine-binding protein LVQ62_16620 PF00472 RF-1 domain LVQ62_16620 PF03462 PCRF domain LVQ62_16655 PF00437 Type II/IV secretion system protein LVQ62_16660 PF01580 FtsK/SpoIIIE family LVQ62_16660 PF12538 DNA transporter LVQ62_16685 PF03699 Uncharacterised protein family (UPF0182) LVQ62_16695 PF13180 PDZ domain LVQ62_16695 PF05362 Lon protease (S16) C-terminal proteolytic domain LVQ62_16700 PF02391 MoaE protein LVQ62_16735 PF03109 ABC1 family LVQ62_16740 PF02467 Transcription factor WhiB LVQ62_16755 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LVQ62_16755 PF00293 NUDIX domain LVQ62_16755 PF09297 NADH pyrophosphatase zinc ribbon domain LVQ62_16765 PF00580 UvrD/REP helicase N-terminal domain LVQ62_16765 PF13361 UvrD-like helicase C-terminal domain LVQ62_16775 PF00899 ThiF family LVQ62_16775 PF00581 Rhodanese-like domain LVQ62_16800 PF00270 DEAD/DEAH box helicase LVQ62_16800 PF00271 Helicase conserved C-terminal domain LVQ62_16805 PF00106 short chain dehydrogenase LVQ62_16820 PF02811 PHP domain LVQ62_16835 PF00557 Metallopeptidase family M24 LVQ62_16835 PF05195 Aminopeptidase P, N-terminal domain LVQ62_16850 PF03448 MgtE intracellular N domain LVQ62_16850 PF01769 Divalent cation transporter LVQ62_16850 PF00571 CBS domain LVQ62_16860 PF10609 NUBPL iron-transfer P-loop NTPase LVQ62_16860 PF01883 Iron-sulfur cluster assembly protein LVQ62_16865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LVQ62_16865 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LVQ62_16875 PF13180 PDZ domain LVQ62_16885 PF08281 Sigma-70, region 4 LVQ62_16885 PF04542 Sigma-70 region 2 LVQ62_16890 PF01596 O-methyltransferase LVQ62_16900 PF00378 Enoyl-CoA hydratase/isomerase LVQ62_16920 PF13673 Acetyltransferase (GNAT) domain LVQ62_16920 PF13302 Acetyltransferase (GNAT) domain LVQ62_16920 PF03352 Methyladenine glycosylase LVQ62_16920 PF00117 Glutamine amidotransferase class-I LVQ62_16920 PF00958 GMP synthase C terminal domain LVQ62_16935 PF03641 Possible lysine decarboxylase LVQ62_16940 PF07687 Peptidase dimerisation domain LVQ62_16940 PF01546 Peptidase family M20/M25/M40 LVQ62_16950 PF00248 Aldo/keto reductase family LVQ62_16970 PF02629 CoA binding domain LVQ62_16970 PF00549 CoA-ligase LVQ62_16975 PF00549 CoA-ligase LVQ62_16975 PF08442 ATP-grasp domain LVQ62_16980 PF02310 B12 binding domain LVQ62_16985 PF01551 Peptidase family M23 LVQ62_16985 PF04225 Opacity-associated protein A LysM-like domain LVQ62_16990 PF13361 UvrD-like helicase C-terminal domain LVQ62_16990 PF00580 UvrD/REP helicase N-terminal domain LVQ62_17005 PF01177 Asp/Glu/Hydantoin racemase LVQ62_17015 PF00144 Beta-lactamase LVQ62_17020 PF09335 SNARE associated Golgi protein LVQ62_17030 PF01329 Pterin 4 alpha carbinolamine dehydratase LVQ62_17060 PF02780 Transketolase, C-terminal domain LVQ62_17060 PF02779 Transketolase, pyrimidine binding domain LVQ62_17060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LVQ62_17065 PF04055 Radical SAM superfamily LVQ62_17065 PF06463 Molybdenum Cofactor Synthesis C LVQ62_17070 PF02401 LytB protein LVQ62_17075 PF13249 Squalene-hopene cyclase N-terminal domain LVQ62_17075 PF13243 Squalene-hopene cyclase C-terminal domain LVQ62_17080 PF00348 Polyprenyl synthetase LVQ62_17085 PF01593 Flavin containing amine oxidoreductase LVQ62_17100 PF05651 Putative sugar diacid recognition LVQ62_17100 PF13556 PucR C-terminal helix-turn-helix domain LVQ62_17100 PF17853 GGDEF-like domain LVQ62_17120 PF00106 short chain dehydrogenase LVQ62_17125 PF02540 NAD synthase LVQ62_17125 PF00958 GMP synthase C terminal domain LVQ62_17125 PF00117 Glutamine amidotransferase class-I LVQ62_17140 PF00664 ABC transporter transmembrane region LVQ62_17140 PF00005 ABC transporter LVQ62_17145 PF00664 ABC transporter transmembrane region LVQ62_17145 PF00005 ABC transporter LVQ62_17150 PF05199 GMC oxidoreductase LVQ62_17155 PF00478 IMP dehydrogenase / GMP reductase domain LVQ62_17160 PF00571 CBS domain LVQ62_17160 PF00478 IMP dehydrogenase / GMP reductase domain LVQ62_17170 PF04542 Sigma-70 region 2 LVQ62_17170 PF04545 Sigma-70, region 4 LVQ62_17180 PF00118 TCP-1/cpn60 chaperonin family LVQ62_17185 PF00166 Chaperonin 10 Kd subunit LVQ62_17200 PF00933 Glycosyl hydrolase family 3 N terminal domain LVQ62_17205 PF00814 Glycoprotease family LVQ62_17210 PF00583 Acetyltransferase (GNAT) family LVQ62_17215 PF00814 Glycoprotease family LVQ62_17215 PF00583 Acetyltransferase (GNAT) family LVQ62_17220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LVQ62_17225 PF12697 Alpha/beta hydrolase family LVQ62_17230 PF01168 Alanine racemase, N-terminal domain LVQ62_17230 PF00842 Alanine racemase, C-terminal domain LVQ62_17240 PF01256 Carbohydrate kinase LVQ62_17240 PF03853 YjeF-related protein N-terminus LVQ62_17245 PF01648 4'-phosphopantetheinyl transferase superfamily LVQ62_17250 PF01380 SIS domain LVQ62_17255 PF00485 Phosphoribulokinase / Uridine kinase family LVQ62_17270 PF02447 GntP family permease LVQ62_17280 PF02562 PhoH-like protein LVQ62_17280 PF13638 PIN domain LVQ62_17285 PF01255 Putative undecaprenyl diphosphate synthase LVQ62_17290 PF03006 Haemolysin-III related LVQ62_17300 PF02585 GlcNAc-PI de-N-acetylase LVQ62_17310 PF03449 Transcription elongation factor, N-terminal LVQ62_17310 PF01272 Transcription elongation factor, GreA/GreB, C-term LVQ62_17315 PF01061 ABC-2 type transporter LVQ62_17320 PF13732 Domain of unknown function (DUF4162) LVQ62_17320 PF00005 ABC transporter LVQ62_17325 PF01053 Cys/Met metabolism PLP-dependent enzyme LVQ62_17335 PF02091 Glycyl-tRNA synthetase alpha subunit LVQ62_17335 PF02092 Glycyl-tRNA synthetase beta subunit LVQ62_17340 PF01625 Peptide methionine sulfoxide reductase LVQ62_17350 PF00083 Sugar (and other) transporter LVQ62_17355 PF00210 Ferritin-like domain LVQ62_17375 PF02811 PHP domain LVQ62_17375 PF14579 Helix-hairpin-helix motif LVQ62_17375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LVQ62_17375 PF07733 Bacterial DNA polymerase III alpha NTPase domain LVQ62_17380 PF07722 Peptidase C26 LVQ62_17390 PF00171 Aldehyde dehydrogenase family LVQ62_17400 PF07729 FCD domain LVQ62_17400 PF00392 Bacterial regulatory proteins, gntR family LVQ62_17420 PF17284 Spermidine synthase tetramerisation domain LVQ62_17425 PF03190 Protein of unknown function, DUF255 LVQ62_17435 PF00152 tRNA synthetases class II (D, K and N) LVQ62_17435 PF16995 Transmembrane region of lysyl-tRNA synthetase LVQ62_17435 PF09924 Uncharacterised conserved protein (DUF2156) LVQ62_17435 PF01336 OB-fold nucleic acid binding domain