locus-tag class description Atep_00010 PF00308 Bacterial dnaA protein Atep_00010 PF08299 Bacterial dnaA protein helix-turn-helix Atep_00010 PF11638 DnaA N-terminal domain Atep_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain Atep_00020 PF02767 DNA polymerase III beta subunit, central domain Atep_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain Atep_00030 PF02463 RecF/RecN/SMC N terminal domain Atep_00060 PF00005 ABC transporter Atep_00070 PF01545 Cation efflux family Atep_00070 PF16916 Dimerisation domain of Zinc Transporter Atep_00140 PF00486 Transcriptional regulatory protein, C terminal Atep_00140 PF00072 Response regulator receiver domain Atep_00150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_00170 PF12161 HsdM N-terminal domain Atep_00170 PF02384 N-6 DNA Methylase Atep_00180 PF01420 Type I restriction modification DNA specificity domain Atep_00190 PF13173 AAA domain Atep_00190 PF13635 Domain of unknown function (DUF4143) Atep_00210 PF00990 Diguanylate cyclase, GGDEF domain Atep_00210 PF08448 PAS fold Atep_00220 PF02386 Cation transport protein Atep_00240 PF03819 MazG nucleotide pyrophosphohydrolase domain Atep_00260 PF17760 UvrA interaction domain Atep_00260 PF00005 ABC transporter Atep_00260 PF17755 UvrA DNA-binding domain Atep_00320 PF00762 Ferrochelatase Atep_00330 PF00155 Aminotransferase class I and II Atep_00340 PF00132 Bacterial transferase hexapeptide (six repeats) Atep_00340 PF14602 Hexapeptide repeat of succinyl-transferase Atep_00340 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Atep_00350 PF07687 Peptidase dimerisation domain Atep_00350 PF01546 Peptidase family M20/M25/M40 Atep_00360 PF03776 Septum formation topological specificity factor MinE Atep_00370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atep_00380 PF05209 Septum formation inhibitor MinC, N-terminal domain Atep_00380 PF03775 Septum formation inhibitor MinC, C-terminal domain Atep_00390 PF01230 HIT domain Atep_00400 PF02132 RecR protein Atep_00400 PF13662 Toprim domain Atep_00410 PF02575 YbaB/EbfC DNA-binding family Atep_00420 PF12169 DNA polymerase III subunits gamma and tau domain III Atep_00420 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Atep_00420 PF12170 DNA polymerase III tau subunit V interacting with alpha Atep_00430 PF01761 3-dehydroquinate synthase Atep_00440 PF01202 Shikimate kinase Atep_00450 PF03958 Bacterial type II/III secretion system short domain Atep_00450 PF00263 Bacterial type II and III secretion system protein Atep_00450 PF07660 Secretin and TonB N terminus short domain Atep_00450 PF11741 AMIN domain Atep_00470 PF04350 Pilus assembly protein, PilO Atep_00480 PF05137 Fimbrial assembly protein (PilN) Atep_00490 PF11104 Type IV pilus assembly protein PilM; Atep_00510 PF00285 Citrate synthase, C-terminal domain Atep_00520 PF00390 Malic enzyme, N-terminal domain Atep_00520 PF03949 Malic enzyme, NAD binding domain Atep_00530 PF01197 Ribosomal protein L31 Atep_00540 PF06969 HemN C-terminal domain Atep_00540 PF04055 Radical SAM superfamily Atep_00550 PF00575 S1 RNA binding domain Atep_00570 PF13361 UvrD-like helicase C-terminal domain Atep_00570 PF00580 UvrD/REP helicase N-terminal domain Atep_00580 PF01208 Uroporphyrinogen decarboxylase (URO-D) Atep_00590 PF00795 Carbon-nitrogen hydrolase Atep_00590 PF00583 Acetyltransferase (GNAT) family Atep_00600 PF08240 Alcohol dehydrogenase GroES-like domain Atep_00600 PF00107 Zinc-binding dehydrogenase Atep_00620 PF01171 PP-loop family Atep_00640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_00640 PF00512 His Kinase A (phospho-acceptor) domain Atep_00640 PF00989 PAS fold Atep_00650 PF11992 Domain of unknown function (DUF3488) Atep_00650 PF13559 Domain of unknown function (DUF4129) Atep_00650 PF01841 Transglutaminase-like superfamily Atep_00670 PF17863 AAA lid domain Atep_00670 PF07726 ATPase family associated with various cellular activities (AAA) Atep_00680 PF13932 GidA associated domain Atep_00680 PF01134 Glucose inhibited division protein A Atep_00700 PF08447 PAS fold Atep_00700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_00700 PF08447 PAS fold Atep_00700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_00720 PF00149 Calcineurin-like phosphoesterase Atep_00720 PF02872 5'-nucleotidase, C-terminal domain Atep_00730 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Atep_00740 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Atep_00750 PF00471 Ribosomal protein L33 Atep_00760 PF00830 Ribosomal L28 family Atep_00770 PF04241 Protein of unknown function (DUF423) Atep_00780 PF04452 RNA methyltransferase Atep_00790 PF02895 Signal transducing histidine kinase, homodimeric domain Atep_00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_00790 PF01627 Hpt domain Atep_00790 PF00072 Response regulator receiver domain Atep_00790 PF01584 CheW-like domain Atep_00800 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Atep_00800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_00820 PF00072 Response regulator receiver domain Atep_00830 PF00072 Response regulator receiver domain Atep_00850 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Atep_00850 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Atep_00870 PF03544 Gram-negative bacterial TonB protein C-terminal Atep_00880 PF02622 Uncharacterized ACR, COG1678 Atep_00890 PF03652 Holliday junction resolvase Atep_00900 PF00156 Phosphoribosyl transferase domain Atep_00910 PF00156 Phosphoribosyl transferase domain Atep_00920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atep_00920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atep_00930 PF01979 Amidohydrolase family Atep_00950 PF03063 Prismane/CO dehydrogenase family Atep_00970 PF02374 Anion-transporting ATPase Atep_00970 PF17886 HSP20-like domain found in ArsA Atep_00990 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Atep_01000 PF00271 Helicase conserved C-terminal domain Atep_01000 PF00270 DEAD/DEAH box helicase Atep_01010 PF00490 Delta-aminolevulinic acid dehydratase Atep_01020 PF01488 Shikimate / quinate 5-dehydrogenase Atep_01020 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Atep_01020 PF08501 Shikimate dehydrogenase substrate binding domain Atep_01030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atep_01030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Atep_01050 PF13538 UvrD-like helicase C-terminal domain Atep_01060 PF13361 UvrD-like helicase C-terminal domain Atep_01060 PF00580 UvrD/REP helicase N-terminal domain Atep_01060 PF12705 PD-(D/E)XK nuclease superfamily Atep_01070 PF00589 Phage integrase family Atep_01070 PF13495 Phage integrase, N-terminal SAM-like domain Atep_01090 PF00011 Hsp20/alpha crystallin family Atep_01130 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Atep_01130 PF00437 Type II/IV secretion system protein Atep_01150 PF07664 Ferrous iron transport protein B C terminus Atep_01150 PF17910 FeoB cytosolic helical domain Atep_01150 PF02421 Ferrous iron transport protein B Atep_01150 PF07670 Nucleoside recognition Atep_01180 PF03485 Arginyl tRNA synthetase N terminal domain Atep_01180 PF05746 DALR anticodon binding domain Atep_01180 PF00750 tRNA synthetases class I (R) Atep_01190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Atep_01190 PF00270 DEAD/DEAH box helicase Atep_01190 PF18074 Primosomal protein N C-terminal domain Atep_01190 PF00271 Helicase conserved C-terminal domain Atep_01190 PF17764 3′ DNA-binding domain (3′BD) Atep_01210 PF03881 Fructosamine kinase Atep_01240 PF02391 MoaE protein Atep_01260 PF01797 Transposase IS200 like Atep_01270 PF01385 Probable transposase Atep_01270 PF07282 Putative transposase DNA-binding domain Atep_01270 PF12323 Helix-turn-helix domain Atep_01280 PF07963 Prokaryotic N-terminal methylation motif Atep_01280 PF00114 Pilin (bacterial filament) Atep_01320 PF00535 Glycosyl transferase family 2 Atep_01340 PF02687 FtsX-like permease family Atep_01340 PF12704 MacB-like periplasmic core domain Atep_01350 PF00005 ABC transporter Atep_01370 PF13567 Domain of unknown function (DUF4131) Atep_01370 PF00753 Metallo-beta-lactamase superfamily Atep_01370 PF03772 Competence protein Atep_01400 PF02654 Cobalamin-5-phosphate synthase Atep_01410 PF00300 Histidine phosphatase superfamily (branch 1) Atep_01420 PF02277 Phosphoribosyltransferase Atep_01430 PF00593 TonB dependent receptor Atep_01430 PF07715 TonB-dependent Receptor Plug Domain Atep_01440 PF00118 TCP-1/cpn60 chaperonin family Atep_01450 PF00166 Chaperonin 10 Kd subunit Atep_01460 PF01368 DHH family Atep_01460 PF02272 DHHA1 domain Atep_01460 PF17768 RecJ OB domain Atep_01470 PF04751 Protein of unknown function (DUF615) Atep_01510 PF00459 Inositol monophosphatase family Atep_01520 PF00588 SpoU rRNA Methylase family Atep_01530 PF00132 Bacterial transferase hexapeptide (six repeats) Atep_01540 PF02082 Transcriptional regulator Atep_01550 PF07743 HSCB C-terminal oligomerisation domain Atep_01570 PF03279 Bacterial lipid A biosynthesis acyltransferase Atep_01580 PF06827 Zinc finger found in FPG and IleRS Atep_01580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Atep_01580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Atep_01620 PF00005 ABC transporter Atep_01630 PF00271 Helicase conserved C-terminal domain Atep_01630 PF12343 Cold shock protein DEAD box A Atep_01630 PF00270 DEAD/DEAH box helicase Atep_01630 PF03880 DbpA RNA binding domain Atep_01650 PF01757 Acyltransferase family Atep_01660 PF04891 NifQ Atep_01680 PF13580 SIS domain Atep_01700 PF00156 Phosphoribosyl transferase domain Atep_01730 PF00588 SpoU rRNA Methylase family Atep_01740 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Atep_01740 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Atep_01750 PF02556 Preprotein translocase subunit SecB Atep_01760 PF00581 Rhodanese-like domain Atep_01760 PF12368 Rhodanase C-terminal Atep_01760 PF17773 UPF0176 acylphosphatase like domain Atep_01780 PF01551 Peptidase family M23 Atep_01790 PF03572 Peptidase family S41 Atep_01790 PF13180 PDZ domain Atep_01800 PF01965 DJ-1/PfpI family Atep_01820 PF02719 Polysaccharide biosynthesis protein Atep_01830 PF00437 Type II/IV secretion system protein Atep_01830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Atep_01840 PF00572 Ribosomal protein L13 Atep_01850 PF00380 Ribosomal protein S9/S16 Atep_01870 PF13439 Glycosyltransferase Family 4 Atep_01890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atep_01890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atep_01890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atep_01890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atep_01900 PF04041 beta-1,4-mannooligosaccharide phosphorylase Atep_01910 PF01050 Mannose-6-phosphate isomerase Atep_01910 PF00483 Nucleotidyl transferase Atep_01920 PF04041 beta-1,4-mannooligosaccharide phosphorylase Atep_01960 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Atep_01960 PF02896 PEP-utilising enzyme, TIM barrel domain Atep_01960 PF00391 PEP-utilising enzyme, mobile domain Atep_01990 PF00873 AcrB/AcrD/AcrF family Atep_02000 PF00873 AcrB/AcrD/AcrF family Atep_02000 PF00873 AcrB/AcrD/AcrF family Atep_02090 PF00535 Glycosyl transferase family 2 Atep_02110 PF02492 CobW/HypB/UreG, nucleotide-binding domain Atep_02150 PF13460 NAD(P)H-binding Atep_02170 PF01380 SIS domain Atep_02220 PF13635 Domain of unknown function (DUF4143) Atep_02220 PF13173 AAA domain Atep_02240 PF00990 Diguanylate cyclase, GGDEF domain Atep_02260 PF00474 Sodium:solute symporter family Atep_02280 PF00291 Pyridoxal-phosphate dependent enzyme Atep_02280 PF14821 Threonine synthase N terminus Atep_02290 PF00682 HMGL-like Atep_02290 PF08502 LeuA allosteric (dimerisation) domain Atep_02300 PF02580 D-Tyr-tRNA(Tyr) deacylase Atep_02310 PF00561 alpha/beta hydrolase fold Atep_02320 PF13667 ThiC-associated domain Atep_02320 PF01964 Radical SAM ThiC family Atep_02330 PF00563 EAL domain Atep_02330 PF00990 Diguanylate cyclase, GGDEF domain Atep_02330 PF00072 Response regulator receiver domain Atep_02350 PF00561 alpha/beta hydrolase fold Atep_02360 PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) Atep_02370 PF02803 Thiolase, C-terminal domain Atep_02370 PF00108 Thiolase, N-terminal domain Atep_02380 PF07879 PHB/PHA accumulation regulator DNA-binding domain Atep_02380 PF05233 PHB accumulation regulatory domain Atep_02400 PF09361 Phasin protein Atep_02410 PF00106 short chain dehydrogenase Atep_02430 PF01784 NIF3 (NGG1p interacting factor 3) Atep_02440 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Atep_02440 PF00355 Rieske [2Fe-2S] domain Atep_02450 PF00033 Cytochrome b/b6/petB Atep_02450 PF00032 Cytochrome b(C-terminal)/b6/petD Atep_02460 PF02167 Cytochrome C1 family Atep_02470 PF00043 Glutathione S-transferase, C-terminal domain Atep_02470 PF02798 Glutathione S-transferase, N-terminal domain Atep_02480 PF04386 Stringent starvation protein B Atep_02550 PF00330 Aconitase family (aconitate hydratase) Atep_02550 PF00694 Aconitase C-terminal domain Atep_02560 PF04303 PrpF protein Atep_02570 PF01625 Peptide methionine sulfoxide reductase Atep_02590 PF00285 Citrate synthase, C-terminal domain Atep_02610 PF07729 FCD domain Atep_02610 PF00392 Bacterial regulatory proteins, gntR family Atep_02700 PF00672 HAMP domain Atep_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_02700 PF01627 Hpt domain Atep_02700 PF00072 Response regulator receiver domain Atep_02700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_02700 PF00512 His Kinase A (phospho-acceptor) domain Atep_02710 PF13193 AMP-binding enzyme C-terminal domain Atep_02710 PF00501 AMP-binding enzyme Atep_02710 PF16177 Acetyl-coenzyme A synthetase N-terminus Atep_02720 PF00202 Aminotransferase class-III Atep_02730 PF02581 Thiamine monophosphate synthase Atep_02750 PF08543 Phosphomethylpyrimidine kinase Atep_02760 PF00301 Rubredoxin Atep_02780 PF01521 Iron-sulphur cluster biosynthesis Atep_02790 PF02774 Semialdehyde dehydrogenase, dimerisation domain Atep_02790 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atep_02800 PF01521 Iron-sulphur cluster biosynthesis Atep_02820 PF01479 S4 domain Atep_02820 PF00579 tRNA synthetases class I (W and Y) Atep_02830 PF01569 PAP2 superfamily Atep_02840 PF13439 Glycosyltransferase Family 4 Atep_02840 PF00534 Glycosyl transferases group 1 Atep_02850 PF01553 Acyltransferase Atep_02880 PF00293 NUDIX domain Atep_02890 PF01590 GAF domain Atep_02890 PF05524 PEP-utilising enzyme, N-terminal Atep_02890 PF00391 PEP-utilising enzyme, mobile domain Atep_02890 PF02896 PEP-utilising enzyme, TIM barrel domain Atep_02900 PF02913 FAD linked oxidases, C-terminal domain Atep_02900 PF01565 FAD binding domain Atep_02910 PF04972 BON domain Atep_02920 PF02021 Uncharacterised protein family UPF0102 Atep_02930 PF04348 LppC putative lipoprotein Atep_02940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atep_02950 PF02381 MraZ protein, putative antitoxin-like Atep_02960 PF01795 MraW methylase family Atep_02970 PF04999 Cell division protein FtsL Atep_02980 PF03717 Penicillin-binding Protein dimerisation domain Atep_02980 PF00905 Penicillin binding protein transpeptidase domain Atep_02990 PF01225 Mur ligase family, catalytic domain Atep_02990 PF02875 Mur ligase family, glutamate ligase domain Atep_02990 PF08245 Mur ligase middle domain Atep_03000 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Atep_03000 PF00953 Glycosyl transferase family 4 Atep_03010 PF08245 Mur ligase middle domain Atep_03010 PF02875 Mur ligase family, glutamate ligase domain Atep_03020 PF01098 Cell cycle protein Atep_03030 PF03033 Glycosyltransferase family 28 N-terminal domain Atep_03030 PF04101 Glycosyltransferase family 28 C-terminal domain Atep_03040 PF08245 Mur ligase middle domain Atep_03040 PF02875 Mur ligase family, glutamate ligase domain Atep_03040 PF01225 Mur ligase family, catalytic domain Atep_03050 PF01565 FAD binding domain Atep_03050 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Atep_03060 PF01820 D-ala D-ala ligase N-terminus Atep_03060 PF07478 D-ala D-ala ligase C-terminus Atep_03070 PF08478 POTRA domain, FtsQ-type Atep_03070 PF03799 Cell division protein FtsQ Atep_03080 PF02491 SHS2 domain inserted in FTSA Atep_03090 PF00091 Tubulin/FtsZ family, GTPase domain Atep_03090 PF12327 FtsZ family, C-terminal domain Atep_03100 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Atep_03120 PF01476 LysM domain Atep_03120 PF01551 Peptidase family M23 Atep_03130 PF02810 SEC-C motif Atep_03130 PF01043 SecA preprotein cross-linking domain Atep_03130 PF07516 SecA Wing and Scaffold domain Atep_03130 PF07517 SecA DEAD-like domain Atep_03140 PF01960 ArgJ family Atep_03150 PF00293 NUDIX domain Atep_03160 PF00578 AhpC/TSA family Atep_03190 PF02424 ApbE family Atep_03200 PF03884 DNA gyrase inhibitor YacG Atep_03210 PF07072 Cell division protein Atep_03230 PF01709 Transcriptional regulator Atep_03240 PF02075 Crossover junction endodeoxyribonuclease RuvC Atep_03250 PF07499 RuvA, C-terminal domain Atep_03250 PF01330 RuvA N terminal domain Atep_03260 PF00990 Diguanylate cyclase, GGDEF domain Atep_03280 PF01565 FAD binding domain Atep_03290 PF02754 Cysteine-rich domain Atep_03290 PF13183 4Fe-4S dicluster domain Atep_03310 PF01121 Dephospho-CoA kinase Atep_03320 PF06750 Bacterial Peptidase A24 N-terminal domain Atep_03320 PF01478 Type IV leader peptidase family Atep_03330 PF00482 Type II secretion system (T2SS), protein F Atep_03340 PF00437 Type II/IV secretion system protein Atep_03340 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Atep_03360 PF16177 Acetyl-coenzyme A synthetase N-terminus Atep_03360 PF00501 AMP-binding enzyme Atep_03360 PF13193 AMP-binding enzyme C-terminal domain Atep_03400 PF00571 CBS domain Atep_03410 PF00117 Glutamine amidotransferase class-I Atep_03420 PF00591 Glycosyl transferase family, a/b domain Atep_03420 PF02885 Glycosyl transferase family, helical bundle domain Atep_03430 PF00218 Indole-3-glycerol phosphate synthase Atep_03440 PF00027 Cyclic nucleotide-binding domain Atep_03440 PF13545 Crp-like helix-turn-helix domain Atep_03450 PF02566 OsmC-like protein Atep_03460 PF03232 Ubiquinone biosynthesis protein COQ7 Atep_03470 PF13183 4Fe-4S dicluster domain Atep_03470 PF02754 Cysteine-rich domain Atep_03490 PF00482 Type II secretion system (T2SS), protein F Atep_03500 PF08334 Type II secretion system (T2SS), protein G Atep_03500 PF07963 Prokaryotic N-terminal methylation motif Atep_03510 PF07963 Prokaryotic N-terminal methylation motif Atep_03520 PF07963 Prokaryotic N-terminal methylation motif Atep_03530 PF07963 Prokaryotic N-terminal methylation motif Atep_03530 PF11612 Type II secretion system (T2SS), protein J Atep_03540 PF03934 Type II secretion system (T2SS), protein K Atep_03550 PF01061 ABC-2 type transporter Atep_03550 PF00005 ABC transporter Atep_03550 PF00498 FHA domain Atep_03600 PF00263 Bacterial type II and III secretion system protein Atep_03600 PF03958 Bacterial type II/III secretion system short domain Atep_03610 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Atep_03610 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_03620 PF01493 GXGXG motif Atep_03620 PF01645 Conserved region in glutamate synthase Atep_03620 PF00310 Glutamine amidotransferases class-II Atep_03620 PF04898 Glutamate synthase central domain Atep_03670 PF00672 HAMP domain Atep_03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_03670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_03670 PF00072 Response regulator receiver domain Atep_03670 PF01627 Hpt domain Atep_03670 PF00512 His Kinase A (phospho-acceptor) domain Atep_03680 PF00563 EAL domain Atep_03680 PF03707 Bacterial signalling protein N terminal repeat Atep_03680 PF00990 Diguanylate cyclase, GGDEF domain Atep_03690 PF00375 Sodium:dicarboxylate symporter family Atep_03700 PF01225 Mur ligase family, catalytic domain Atep_03700 PF02875 Mur ligase family, glutamate ligase domain Atep_03700 PF08245 Mur ligase middle domain Atep_03740 PF04055 Radical SAM superfamily Atep_03740 PF00919 Uncharacterized protein family UPF0004 Atep_03750 PF16123 Hydroxyacylglutathione hydrolase C-terminus Atep_03750 PF00753 Metallo-beta-lactamase superfamily Atep_03760 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Atep_03760 PF02779 Transketolase, pyrimidine binding domain Atep_03760 PF02780 Transketolase, C-terminal domain Atep_03770 PF09190 DALR domain Atep_03770 PF01406 tRNA synthetases class I (C) catalytic domain Atep_03790 PF00166 Chaperonin 10 Kd subunit Atep_03800 PF00118 TCP-1/cpn60 chaperonin family Atep_03820 PF04430 Protein of unknown function (DUF498/DUF598) Atep_03830 PF02086 D12 class N6 adenine-specific DNA methyltransferase Atep_03840 PF09233 Restriction endonuclease EcoRV Atep_03870 PF01609 Transposase DDE domain Atep_03870 PF13808 DDE_Tnp_1-associated Atep_03880 PF00749 tRNA synthetases class I (E and Q), catalytic domain Atep_03890 PF03793 PASTA domain Atep_03890 PF00069 Protein kinase domain Atep_03950 PF00593 TonB dependent receptor Atep_03950 PF07715 TonB-dependent Receptor Plug Domain Atep_03970 PF00355 Rieske [2Fe-2S] domain Atep_03980 PF02885 Glycosyl transferase family, helical bundle domain Atep_03980 PF00591 Glycosyl transferase family, a/b domain Atep_04010 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Atep_04020 PF11734 TilS substrate C-terminal domain Atep_04020 PF01171 PP-loop family Atep_04020 PF09179 TilS substrate binding domain Atep_04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_04030 PF00672 HAMP domain Atep_04030 PF00512 His Kinase A (phospho-acceptor) domain Atep_04030 PF01627 Hpt domain Atep_04030 PF00072 Response regulator receiver domain Atep_04030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_04040 PF02527 rRNA small subunit methyltransferase G Atep_04050 PF13614 AAA domain Atep_04060 PF17762 HTH domain found in ParB protein Atep_04060 PF02195 ParB-like nuclease domain Atep_04080 PF00119 ATP synthase A chain Atep_04090 PF00137 ATP synthase subunit C Atep_04100 PF00430 ATP synthase B/B' CF(0) Atep_04110 PF00213 ATP synthase delta (OSCP) subunit Atep_04120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atep_04120 PF00306 ATP synthase alpha/beta chain, C terminal domain Atep_04120 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atep_04130 PF00231 ATP synthase Atep_04140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atep_04140 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atep_04150 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Atep_04150 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Atep_04160 PF00132 Bacterial transferase hexapeptide (six repeats) Atep_04160 PF12804 MobA-like NTP transferase domain Atep_04230 PF01522 Polysaccharide deacetylase Atep_04250 PF00085 Thioredoxin Atep_04260 PF00085 Thioredoxin Atep_04270 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Atep_04270 PF00117 Glutamine amidotransferase class-I Atep_04280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atep_04280 PF02142 MGS-like domain Atep_04280 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Atep_04290 PF03449 Transcription elongation factor, N-terminal Atep_04290 PF01272 Transcription elongation factor, GreA/GreB, C-term Atep_04300 PF10609 NUBPL iron-transfer P-loop NTPase Atep_04320 PF13614 AAA domain Atep_04330 PF00106 short chain dehydrogenase Atep_04380 PF01336 OB-fold nucleic acid binding domain Atep_04380 PF00152 tRNA synthetases class II (D, K and N) Atep_04380 PF02938 GAD domain Atep_04390 PF00293 NUDIX domain Atep_04400 PF00664 ABC transporter transmembrane region Atep_04400 PF00005 ABC transporter Atep_04420 PF01451 Low molecular weight phosphotyrosine protein phosphatase Atep_04430 PF10150 Ribonuclease E/G family Atep_04430 PF12111 Polyribonucleotide phosphorylase C terminal Atep_04430 PF00575 S1 RNA binding domain Atep_04440 PF00849 RNA pseudouridylate synthase Atep_04440 PF01479 S4 domain Atep_04450 PF13419 Haloacid dehalogenase-like hydrolase Atep_04460 PF01343 Peptidase family S49 Atep_04490 PF00486 Transcriptional regulatory protein, C terminal Atep_04490 PF00072 Response regulator receiver domain Atep_04500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_04500 PF00989 PAS fold Atep_04500 PF00672 HAMP domain Atep_04500 PF18698 Histidine kinase sensor domain Atep_04500 PF00512 His Kinase A (phospho-acceptor) domain Atep_04540 PF17941 Polyphosphate kinase C-terminal domain 1 Atep_04540 PF13090 Polyphosphate kinase C-terminal domain 2 Atep_04540 PF02503 Polyphosphate kinase middle domain Atep_04540 PF13089 Polyphosphate kinase N-terminal domain Atep_04550 PF13649 Methyltransferase domain Atep_04560 PF08003 Protein of unknown function (DUF1698) Atep_04570 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Atep_04590 PF01458 Uncharacterized protein family (UPF0051) Atep_04600 PF00005 ABC transporter Atep_04610 PF01458 Uncharacterized protein family (UPF0051) Atep_04620 PF01883 Iron-sulfur cluster assembly protein Atep_04650 PF01568 Molydopterin dinucleotide binding domain Atep_04650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atep_04650 PF00384 Molybdopterin oxidoreductase Atep_04680 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Atep_04680 PF01871 AMMECR1 Atep_04690 PF01875 Memo-like protein Atep_04710 PF01464 Transglycosylase SLT domain Atep_04710 PF14718 Soluble lytic murein transglycosylase L domain Atep_04730 PF01925 Sulfite exporter TauE/SafE Atep_04770 PF01555 DNA methylase Atep_04790 PF00561 alpha/beta hydrolase fold Atep_04800 PF02649 Type I GTP cyclohydrolase folE2 Atep_04810 PF00348 Polyprenyl synthetase Atep_04820 PF02609 Exonuclease VII small subunit Atep_04830 PF00986 DNA gyrase B subunit, carboxyl terminus Atep_04830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_04830 PF01751 Toprim domain Atep_04830 PF00204 DNA gyrase B Atep_04840 PF03023 Lipid II flippase MurJ Atep_04850 PF01649 Ribosomal protein S20 Atep_04860 PF01790 Prolipoprotein diacylglyceryl transferase Atep_04890 PF01975 Survival protein SurE Atep_04910 PF00140 Sigma-70 factor, region 1.2 Atep_04910 PF04545 Sigma-70, region 4 Atep_04910 PF04539 Sigma-70 region 3 Atep_04910 PF04542 Sigma-70 region 2 Atep_04920 PF00115 Cytochrome C and Quinol oxidase polypeptide I Atep_04950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Atep_04950 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Atep_04950 PF00034 Cytochrome c Atep_04960 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Atep_04960 PF12801 4Fe-4S binding domain Atep_04960 PF13746 4Fe-4S dicluster domain Atep_04980 PF00403 Heavy-metal-associated domain Atep_05000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_05000 PF00672 HAMP domain Atep_05000 PF02743 Cache domain Atep_05030 PF00873 AcrB/AcrD/AcrF family Atep_05040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Atep_05070 PF00795 Carbon-nitrogen hydrolase Atep_05070 PF02540 NAD synthase Atep_05080 PF00543 Nitrogen regulatory protein P-II Atep_05090 PF13525 Outer membrane lipoprotein Atep_05100 PF00849 RNA pseudouridylate synthase Atep_05110 PF02578 Multi-copper polyphenol oxidoreductase laccase Atep_05130 PF01327 Polypeptide deformylase Atep_05140 PF11818 C-terminal domain of tail specific protease (DUF3340) Atep_05140 PF17804 Tail specific protease N-terminal domain Atep_05140 PF03572 Peptidase family S41 Atep_05140 PF00595 PDZ domain Atep_05150 PF04262 Glutamate-cysteine ligase Atep_05160 PF02541 Ppx/GppA phosphatase family Atep_05180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atep_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_05190 PF02817 e3 binding domain Atep_05190 PF00364 Biotin-requiring enzyme Atep_05190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atep_05200 PF00456 Transketolase, thiamine diphosphate binding domain Atep_05200 PF17831 Pyruvate dehydrogenase E1 component middle domain Atep_05220 PF01702 Queuine tRNA-ribosyltransferase Atep_05230 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Atep_05240 PF09312 SurA N-terminal domain Atep_05240 PF00639 PPIC-type PPIASE domain Atep_05250 PF04453 LPS transport system D Atep_05250 PF03968 OstA-like protein Atep_05260 PF01636 Phosphotransferase enzyme family Atep_05300 PF00072 Response regulator receiver domain Atep_05300 PF02954 Bacterial regulatory protein, Fis family Atep_05300 PF00158 Sigma-54 interaction domain Atep_05310 PF02843 Phosphoribosylglycinamide synthetase, C domain Atep_05310 PF02844 Phosphoribosylglycinamide synthetase, N domain Atep_05310 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Atep_05320 PF00132 Bacterial transferase hexapeptide (six repeats) Atep_05320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Atep_05330 PF02142 MGS-like domain Atep_05330 PF01808 AICARFT/IMPCHase bienzyme Atep_05340 PF02954 Bacterial regulatory protein, Fis family Atep_05350 PF01207 Dihydrouridine synthase (Dus) Atep_05420 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Atep_05420 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Atep_05430 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Atep_05440 PF02233 NAD(P) transhydrogenase beta subunit Atep_05450 PF07282 Putative transposase DNA-binding domain Atep_05450 PF01385 Probable transposase Atep_05450 PF12323 Helix-turn-helix domain Atep_05500 PF01329 Pterin 4 alpha carbinolamine dehydratase Atep_05540 PF13439 Glycosyltransferase Family 4 Atep_05540 PF00534 Glycosyl transferases group 1 Atep_05560 PF05050 Methyltransferase FkbM domain Atep_05570 PF00535 Glycosyl transferase family 2 Atep_05580 PF13439 Glycosyltransferase Family 4 Atep_05580 PF00534 Glycosyl transferases group 1 Atep_05600 PF13538 UvrD-like helicase C-terminal domain Atep_05600 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Atep_05600 PF14490 Helix-hairpin-helix containing domain Atep_05630 PF02481 DNA recombination-mediator protein A Atep_05630 PF18255 DNA processing protein A sterile alpha motif domain Atep_05710 PF01040 UbiA prenyltransferase family Atep_05720 PF02954 Bacterial regulatory protein, Fis family Atep_05720 PF13188 PAS domain Atep_05720 PF13426 PAS domain Atep_05730 PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) Atep_05740 PF00148 Nitrogenase component 1 type Oxidoreductase Atep_05750 PF00148 Nitrogenase component 1 type Oxidoreductase Atep_05750 PF08369 Proto-chlorophyllide reductase 57 kD subunit Atep_05760 PF11965 Domain of unknown function (DUF3479) Atep_05760 PF02514 CobN/Magnesium Chelatase Atep_05770 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Atep_05780 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus Atep_05780 PF05175 Methyltransferase small domain Atep_05790 PF05239 PRC-barrel domain Atep_05790 PF03967 Photosynthetic reaction centre, H-chain N-terminal region Atep_05820 PF12291 Protein of unknown function (DUF3623) Atep_05830 PF06969 HemN C-terminal domain Atep_05830 PF04055 Radical SAM superfamily Atep_05910 PF14535 AMP-binding enzyme C-terminal domain Atep_05910 PF00501 AMP-binding enzyme Atep_05930 PF00501 AMP-binding enzyme Atep_05930 PF14535 AMP-binding enzyme C-terminal domain Atep_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_05960 PF00512 His Kinase A (phospho-acceptor) domain Atep_05960 PF00072 Response regulator receiver domain Atep_05960 PF01627 Hpt domain Atep_05960 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_05960 PF00672 HAMP domain Atep_05970 PF00672 HAMP domain Atep_05970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_05970 PF02203 Tar ligand binding domain homologue Atep_05980 PF00072 Response regulator receiver domain Atep_05990 PF00072 Response regulator receiver domain Atep_06000 PF00437 Type II/IV secretion system protein Atep_06010 PF00437 Type II/IV secretion system protein Atep_06020 PF00731 AIR carboxylase Atep_06030 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Atep_06030 PF02222 ATP-grasp domain Atep_06040 PF01218 Coproporphyrinogen III oxidase Atep_06050 PF13439 Glycosyltransferase Family 4 Atep_06050 PF00534 Glycosyl transferases group 1 Atep_06080 PF01523 Putative modulator of DNA gyrase Atep_06140 PF01370 NAD dependent epimerase/dehydratase family Atep_06150 PF00953 Glycosyl transferase family 4 Atep_06160 PF00873 AcrB/AcrD/AcrF family Atep_06170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Atep_06190 PF00072 Response regulator receiver domain Atep_06200 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_06200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atep_06230 PF00633 Helix-hairpin-helix motif Atep_06230 PF00730 HhH-GPD superfamily base excision DNA repair protein Atep_06230 PF10576 Iron-sulfur binding domain of endonuclease III Atep_06240 PF01464 Transglycosylase SLT domain Atep_06260 PF05736 OprF membrane domain Atep_06260 PF00691 OmpA family Atep_06280 PF02322 Cytochrome bd terminal oxidase subunit II Atep_06290 PF01654 Cytochrome bd terminal oxidase subunit I Atep_06330 PF16326 ABC transporter C-terminal domain Atep_06330 PF12848 ABC transporter Atep_06330 PF00005 ABC transporter Atep_06350 PF04204 Homoserine O-succinyltransferase Atep_06370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atep_06370 PF00384 Molybdopterin oxidoreductase Atep_06370 PF01568 Molydopterin dinucleotide binding domain Atep_06380 PF13247 4Fe-4S dicluster domain Atep_06380 PF12800 4Fe-4S binding domain Atep_06390 PF04976 DMSO reductase anchor subunit (DmsC) Atep_06420 PF17820 PDZ domain Atep_06420 PF02163 Peptidase family M50 Atep_06450 PF16325 Peptidase family U32 C-terminal domain Atep_06450 PF01136 Peptidase family U32 Atep_06460 PF03692 Putative zinc- or iron-chelating domain Atep_06470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Atep_06470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Atep_06480 PF02899 Phage integrase, N-terminal SAM-like domain Atep_06480 PF00589 Phage integrase family Atep_06490 PF04461 Protein of unknown function (DUF520) Atep_06500 PF10411 Disulfide bond isomerase protein N-terminus Atep_06500 PF13098 Thioredoxin-like domain Atep_06520 PF02592 Putative vitamin uptake transporter Atep_06610 PF12161 HsdM N-terminal domain Atep_06610 PF02384 N-6 DNA Methylase Atep_06630 PF13439 Glycosyltransferase Family 4 Atep_06630 PF00534 Glycosyl transferases group 1 Atep_06660 PF00528 Binding-protein-dependent transport system inner membrane component Atep_06670 PF00528 Binding-protein-dependent transport system inner membrane component Atep_06680 PF00005 ABC transporter Atep_06690 PF01895 PhoU domain Atep_06710 PF01476 LysM domain Atep_06710 PF01464 Transglycosylase SLT domain Atep_06730 PF00075 RNase H Atep_06740 PF00929 Exonuclease Atep_06750 PF00027 Cyclic nucleotide-binding domain Atep_06750 PF00325 Bacterial regulatory proteins, crp family Atep_06760 PF06418 CTP synthase N-terminus Atep_06760 PF00117 Glutamine amidotransferase class-I Atep_06770 PF00793 DAHP synthetase I family Atep_06780 PF01381 Helix-turn-helix Atep_06790 PF00113 Enolase, C-terminal TIM barrel domain Atep_06790 PF03952 Enolase, N-terminal domain Atep_06800 PF04977 Septum formation initiator Atep_06810 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Atep_06820 PF02542 YgbB family Atep_06830 PF01142 tRNA pseudouridine synthase D (TruD) Atep_06840 PF00072 Response regulator receiver domain Atep_06880 PF00970 Oxidoreductase FAD-binding domain Atep_06880 PF00111 2Fe-2S iron-sulfur cluster binding domain Atep_06880 PF00175 Oxidoreductase NAD-binding domain Atep_06900 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Atep_06910 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Atep_06920 PF01432 Peptidase family M3 Atep_06960 PF13426 PAS domain Atep_06960 PF00196 Bacterial regulatory proteins, luxR family Atep_06970 PF00990 Diguanylate cyclase, GGDEF domain Atep_06970 PF05230 MASE2 domain Atep_06980 PF01116 Fructose-bisphosphate aldolase class-II Atep_06990 PF00224 Pyruvate kinase, barrel domain Atep_06990 PF02887 Pyruvate kinase, alpha/beta domain Atep_07000 PF00162 Phosphoglycerate kinase Atep_07010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Atep_07010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Atep_07020 PF02780 Transketolase, C-terminal domain Atep_07020 PF02779 Transketolase, pyrimidine binding domain Atep_07020 PF00456 Transketolase, thiamine diphosphate binding domain Atep_07040 PF00438 S-adenosylmethionine synthetase, N-terminal domain Atep_07040 PF02773 S-adenosylmethionine synthetase, C-terminal domain Atep_07040 PF02772 S-adenosylmethionine synthetase, central domain Atep_07100 PF05221 S-adenosyl-L-homocysteine hydrolase Atep_07100 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Atep_07110 PF02219 Methylenetetrahydrofolate reductase Atep_07120 PF07690 Major Facilitator Superfamily Atep_07150 PF03030 Inorganic H+ pyrophosphatase Atep_07160 PF02424 ApbE family Atep_07170 PF03116 NQR2, RnfD, RnfE family Atep_07180 PF02508 Rnf-Nqr subunit, membrane protein Atep_07190 PF00348 Polyprenyl synthetase Atep_07200 PF00829 Ribosomal prokaryotic L21 protein Atep_07210 PF01016 Ribosomal L27 protein Atep_07220 PF01018 GTP1/OBG Atep_07220 PF01926 50S ribosome-binding GTPase Atep_07230 PF00696 Amino acid kinase family Atep_07230 PF01472 PUA domain Atep_07250 PF04851 Type III restriction enzyme, res subunit Atep_07250 PF08774 VRR-NUC domain Atep_07270 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system Atep_07280 PF01555 DNA methylase Atep_07280 PF18273 Type III R-M EcoP15I C-terminal domain Atep_07320 PF00266 Aminotransferase class-V Atep_07400 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Atep_07400 PF01926 50S ribosome-binding GTPase Atep_07410 PF13360 PQQ-like domain Atep_07420 PF09976 Tetratricopeptide repeat-like domain Atep_07430 PF03129 Anticodon binding domain Atep_07430 PF13393 Histidyl-tRNA synthetase Atep_07460 PF04055 Radical SAM superfamily Atep_07470 PF00334 Nucleoside diphosphate kinase Atep_07490 PF00472 RF-1 domain Atep_07490 PF03462 PCRF domain Atep_07500 PF01336 OB-fold nucleic acid binding domain Atep_07500 PF00152 tRNA synthetases class II (D, K and N) Atep_07520 PF00773 RNB domain Atep_07530 PF05951 Bacterial protein of unknown function (DUF882) Atep_07540 PF01464 Transglycosylase SLT domain Atep_07540 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Atep_07560 PF00384 Molybdopterin oxidoreductase Atep_07560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atep_07560 PF01568 Molydopterin dinucleotide binding domain Atep_07570 PF13247 4Fe-4S dicluster domain Atep_07600 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE Atep_07660 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Atep_07660 PF09363 XFP C-terminal domain Atep_07660 PF09364 XFP N-terminal domain Atep_07680 PF04055 Radical SAM superfamily Atep_07680 PF18693 TRAM domain Atep_07680 PF00919 Uncharacterized protein family UPF0004 Atep_07710 PF00563 EAL domain Atep_07710 PF08668 HDOD domain Atep_07730 PF01207 Dihydrouridine synthase (Dus) Atep_07750 PF03707 Bacterial signalling protein N terminal repeat Atep_07750 PF00563 EAL domain Atep_07750 PF00990 Diguanylate cyclase, GGDEF domain Atep_07810 PF00072 Response regulator receiver domain Atep_07810 PF01627 Hpt domain Atep_07810 PF17149 Periplasmic sensor domain found in signal transduction proteins Atep_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_07810 PF00672 HAMP domain Atep_07810 PF00512 His Kinase A (phospho-acceptor) domain Atep_07820 PF01627 Hpt domain Atep_07820 PF00512 His Kinase A (phospho-acceptor) domain Atep_07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_07820 PF00672 HAMP domain Atep_07820 PF00072 Response regulator receiver domain Atep_07820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_07830 PF01339 CheB methylesterase Atep_07830 PF01739 CheR methyltransferase, SAM binding domain Atep_07830 PF03705 CheR methyltransferase, all-alpha domain Atep_07830 PF08448 PAS fold Atep_07840 PF01627 Hpt domain Atep_07840 PF00072 Response regulator receiver domain Atep_07840 PF00512 His Kinase A (phospho-acceptor) domain Atep_07840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_07840 PF00672 HAMP domain Atep_07840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_07850 PF00672 HAMP domain Atep_07850 PF17149 Periplasmic sensor domain found in signal transduction proteins Atep_07850 PF00512 His Kinase A (phospho-acceptor) domain Atep_07850 PF01627 Hpt domain Atep_07850 PF00072 Response regulator receiver domain Atep_07860 PF03480 Bacterial extracellular solute-binding protein, family 7 Atep_07870 PF00999 Sodium/hydrogen exchanger family Atep_07910 PF03741 Integral membrane protein TerC family Atep_07920 PF00923 Transaldolase/Fructose-6-phosphate aldolase Atep_07940 PF01750 Hydrogenase maturation protease Atep_07970 PF03477 ATP cone domain Atep_07970 PF13597 Anaerobic ribonucleoside-triphosphate reductase Atep_08000 PF00106 short chain dehydrogenase Atep_08010 PF18073 Rubredoxin metal binding domain Atep_08020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Atep_08030 PF00483 Nucleotidyl transferase Atep_08080 PF00072 Response regulator receiver domain Atep_08080 PF00990 Diguanylate cyclase, GGDEF domain Atep_08090 PF00749 tRNA synthetases class I (E and Q), catalytic domain Atep_08100 PF01258 Prokaryotic dksA/traR C4-type zinc finger Atep_08110 PF13419 Haloacid dehalogenase-like hydrolase Atep_08120 PF00155 Aminotransferase class I and II Atep_08130 PF03969 AFG1-like ATPase Atep_08140 PF01176 Translation initiation factor 1A / IF-1 Atep_08210 PF00005 ABC transporter Atep_08210 PF02687 FtsX-like permease family Atep_08210 PF12704 MacB-like periplasmic core domain Atep_08220 PF00005 ABC transporter Atep_08260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_08260 PF00512 His Kinase A (phospho-acceptor) domain Atep_08260 PF00072 Response regulator receiver domain Atep_08260 PF01627 Hpt domain Atep_08270 PF07730 Histidine kinase Atep_08270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_08280 PF00196 Bacterial regulatory proteins, luxR family Atep_08280 PF00072 Response regulator receiver domain Atep_08290 PF08331 Domain of unknown function (DUF1730) Atep_08300 PF01136 Peptidase family U32 Atep_08310 PF01136 Peptidase family U32 Atep_08320 PF04055 Radical SAM superfamily Atep_08320 PF16199 Radical_SAM C-terminal domain Atep_08330 PF00672 HAMP domain Atep_08330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_08350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_08350 PF00512 His Kinase A (phospho-acceptor) domain Atep_08360 PF03707 Bacterial signalling protein N terminal repeat Atep_08360 PF00563 EAL domain Atep_08360 PF00990 Diguanylate cyclase, GGDEF domain Atep_08420 PF07804 HipA-like C-terminal domain Atep_08420 PF13657 HipA N-terminal domain Atep_08450 PF04349 Periplasmic glucan biosynthesis protein, MdoG Atep_08460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atep_08460 PF03466 LysR substrate binding domain Atep_08470 PF02861 Clp amino terminal domain, pathogenicity island component Atep_08470 PF00004 ATPase family associated with various cellular activities (AAA) Atep_08470 PF07724 AAA domain (Cdc48 subfamily) Atep_08470 PF17871 AAA lid domain Atep_08470 PF10431 C-terminal, D2-small domain, of ClpB protein Atep_08480 PF13401 AAA domain Atep_08480 PF01471 Putative peptidoglycan binding domain Atep_08500 PF03448 MgtE intracellular N domain Atep_08500 PF01769 Divalent cation transporter Atep_08500 PF00571 CBS domain Atep_08510 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Atep_08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atep_08520 PF03466 LysR substrate binding domain Atep_08530 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Atep_08530 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Atep_08540 PF00101 Ribulose bisphosphate carboxylase, small chain Atep_08550 PF07728 AAA domain (dynein-related subfamily) Atep_08550 PF08406 CbbQ/NirQ/NorQ C-terminal Atep_08560 PF00092 von Willebrand factor type A domain Atep_08570 PF00672 HAMP domain Atep_08570 PF12729 Four helix bundle sensory module for signal transduction Atep_08570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_08590 PF07689 KaiB domain Atep_08590 PF00512 His Kinase A (phospho-acceptor) domain Atep_08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_08630 PF01037 Lrp/AsnC ligand binding domain Atep_08640 PF00682 HMGL-like Atep_08640 PF08502 LeuA allosteric (dimerisation) domain Atep_08650 PF11871 Domain of unknown function (DUF3391) Atep_08650 PF01966 HD domain Atep_08670 PF02463 RecF/RecN/SMC N terminal domain Atep_08680 PF01513 ATP-NAD kinase Atep_08690 PF01628 HrcA protein C terminal domain Atep_08690 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Atep_08700 PF01025 GrpE Atep_08710 PF00012 Hsp70 protein Atep_08720 PF00226 DnaJ domain Atep_08720 PF01556 DnaJ C terminal domain Atep_08720 PF00684 DnaJ central domain Atep_08750 PF05661 Protein of unknown function (DUF808) Atep_08760 PF02036 SCP-2 sterol transfer family Atep_08790 PF03350 Uncharacterized protein family, UPF0114 Atep_08800 PF00360 Phytochrome region Atep_08800 PF00990 Diguanylate cyclase, GGDEF domain Atep_08800 PF01590 GAF domain Atep_08800 PF00563 EAL domain Atep_08830 PF00012 Hsp70 protein Atep_08850 PF06865 Pyrimidine/purine nucleoside phosphorylase Atep_08860 PF05491 RuvB C-terminal winged helix domain Atep_08860 PF05496 Holliday junction DNA helicase RuvB P-loop domain Atep_08860 PF17864 RuvB AAA lid domain Atep_08900 PF12706 Beta-lactamase superfamily domain Atep_08910 PF02913 FAD linked oxidases, C-terminal domain Atep_08910 PF01565 FAD binding domain Atep_08970 PF02597 ThiS family Atep_08980 PF03453 MoeA N-terminal region (domain I and II) Atep_08980 PF03454 MoeA C-terminal region (domain IV) Atep_08980 PF00994 Probable molybdopterin binding domain Atep_08990 PF00994 Probable molybdopterin binding domain Atep_09000 PF00920 Dehydratase family Atep_09030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Atep_09030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Atep_09040 PF00202 Aminotransferase class-III Atep_09050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Atep_09050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Atep_09060 PF13537 Glutamine amidotransferase domain Atep_09060 PF00733 Asparagine synthase Atep_09070 PF00462 Glutaredoxin Atep_09080 PF00929 Exonuclease Atep_09090 PF04333 MlaA lipoprotein Atep_09100 PF01979 Amidohydrolase family Atep_09160 PF00271 Helicase conserved C-terminal domain Atep_09160 PF12137 RNA polymerase recycling family C-terminal Atep_09160 PF00176 SNF2 family N-terminal domain Atep_09160 PF18339 RapA N-terminal Tudor like domain 1 Atep_09160 PF18337 RapA N-terminal Tudor like domain Atep_09180 PF02463 RecF/RecN/SMC N terminal domain Atep_09230 PF01668 SmpB protein Atep_09240 PF00121 Triosephosphate isomerase Atep_09250 PF03840 Preprotein translocase SecG subunit Atep_09260 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Atep_09270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atep_09280 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Atep_09290 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Atep_09310 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atep_09310 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atep_09310 PF10531 SLBB domain Atep_09320 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Atep_09320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atep_09320 PF00384 Molybdopterin oxidoreductase Atep_09330 PF00146 NADH dehydrogenase Atep_09340 PF12838 4Fe-4S dicluster domain Atep_09350 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Atep_09360 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atep_09370 PF00361 Proton-conducting membrane transporter Atep_09370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atep_09380 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Atep_09380 PF00361 Proton-conducting membrane transporter Atep_09390 PF00361 Proton-conducting membrane transporter Atep_09400 PF00701 Dihydrodipicolinate synthetase family Atep_09410 PF06804 NlpB/DapX lipoprotein Atep_09420 PF00141 Peroxidase Atep_09430 PF00141 Peroxidase Atep_09440 PF00141 Peroxidase Atep_09460 PF01040 UbiA prenyltransferase family Atep_09470 PF00156 Phosphoribosyl transferase domain Atep_09480 PF00933 Glycosyl hydrolase family 3 N terminal domain Atep_09490 PF00004 ATPase family associated with various cellular activities (AAA) Atep_09490 PF17862 AAA+ lid domain Atep_09490 PF06480 FtsH Extracellular Atep_09490 PF01434 Peptidase family M41 Atep_09500 PF01722 BolA-like protein Atep_09510 PF00009 Elongation factor Tu GTP binding domain Atep_09510 PF16658 Class II release factor RF3, C-terminal domain Atep_09520 PF14698 Argininosuccinate lyase C-terminal Atep_09520 PF00206 Lyase Atep_09540 PF00905 Penicillin binding protein transpeptidase domain Atep_09540 PF06832 Penicillin-Binding Protein C-terminus Family Atep_09540 PF00912 Transglycosylase Atep_09560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atep_09560 PF07498 Rho termination factor, N-terminal domain Atep_09560 PF07497 Rho termination factor, RNA-binding domain Atep_09570 PF00085 Thioredoxin Atep_09580 PF00270 DEAD/DEAH box helicase Atep_09580 PF00271 Helicase conserved C-terminal domain Atep_09580 PF12300 ATP-dependent RNA helicase RhlB Atep_09590 PF13419 Haloacid dehalogenase-like hydrolase Atep_09620 PF01515 Phosphate acetyl/butaryl transferase Atep_09620 PF07085 DRTGG domain Atep_09630 PF00871 Acetokinase family Atep_09640 PF12323 Helix-turn-helix domain Atep_09640 PF01385 Probable transposase Atep_09640 PF07282 Putative transposase DNA-binding domain Atep_09650 PF01161 Phosphatidylethanolamine-binding protein Atep_09670 PF03918 Cytochrome C biogenesis protein Atep_09680 PF08534 Redoxin Atep_09690 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Atep_09690 PF01578 Cytochrome C assembly protein Atep_09700 PF03100 CcmE Atep_09720 PF01578 Cytochrome C assembly protein Atep_09750 PF03379 CcmB protein Atep_09760 PF00005 ABC transporter Atep_09770 PF01170 Putative RNA methylase family UPF0020 Atep_09770 PF02926 THUMP domain Atep_09770 PF10672 S-adenosylmethionine-dependent methyltransferase Atep_09780 PF01844 HNH endonuclease Atep_09800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_09800 PF00072 Response regulator receiver domain Atep_09800 PF00512 His Kinase A (phospho-acceptor) domain Atep_09800 PF01627 Hpt domain Atep_09800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_09800 PF00672 HAMP domain Atep_09820 PF00474 Sodium:solute symporter family Atep_09830 PF04341 Protein of unknown function, DUF485 Atep_09840 PF00682 HMGL-like Atep_09840 PF07836 DmpG-like communication domain Atep_09850 PF00285 Citrate synthase, C-terminal domain Atep_09860 PF00072 Response regulator receiver domain Atep_09860 PF01966 HD domain Atep_09870 PF00111 2Fe-2S iron-sulfur cluster binding domain Atep_09870 PF01799 [2Fe-2S] binding domain Atep_09880 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Atep_09890 PF02657 Fe-S metabolism associated domain Atep_09910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_09910 PF00512 His Kinase A (phospho-acceptor) domain Atep_09910 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atep_09910 PF01627 Hpt domain Atep_09910 PF00989 PAS fold Atep_09910 PF00072 Response regulator receiver domain Atep_09920 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Atep_09920 PF00117 Glutamine amidotransferase class-I Atep_09940 PF03781 Sulfatase-modifying factor enzyme 1 Atep_09940 PF12867 DinB superfamily Atep_09950 PF10017 Histidine-specific methyltransferase, SAM-dependent Atep_09970 PF13291 ACT domain Atep_09970 PF04607 Region found in RelA / SpoT proteins Atep_09970 PF02824 TGS domain Atep_10050 PF02687 FtsX-like permease family Atep_10050 PF00005 ABC transporter Atep_10050 PF12704 MacB-like periplasmic core domain Atep_10070 PF03781 Sulfatase-modifying factor enzyme 1 Atep_10070 PF00069 Protein kinase domain Atep_10090 PF00793 DAHP synthetase I family Atep_10110 PF00912 Transglycosylase Atep_10140 PF13519 von Willebrand factor type A domain Atep_10150 PF00092 von Willebrand factor type A domain Atep_10180 PF01882 Protein of unknown function DUF58 Atep_10200 PF00364 Biotin-requiring enzyme Atep_10200 PF02817 e3 binding domain Atep_10200 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Atep_10210 PF02779 Transketolase, pyrimidine binding domain Atep_10210 PF16078 2-oxoglutarate dehydrogenase N-terminus Atep_10210 PF00676 Dehydrogenase E1 component Atep_10210 PF16870 2-oxoglutarate dehydrogenase C-terminal Atep_10230 PF03900 Porphobilinogen deaminase, C-terminal domain Atep_10230 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Atep_10240 PF02602 Uroporphyrinogen-III synthase HemD Atep_10300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_10300 PF08447 PAS fold Atep_10340 PF00484 Carbonic anhydrase Atep_10410 PF01594 AI-2E family transporter Atep_10420 PF01435 Peptidase family M48 Atep_10430 PF01219 Prokaryotic diacylglycerol kinase Atep_10440 PF02347 Glycine cleavage system P-protein Atep_10450 PF02347 Glycine cleavage system P-protein Atep_10460 PF01597 Glycine cleavage H-protein Atep_10470 PF01571 Aminomethyltransferase folate-binding domain Atep_10470 PF08669 Glycine cleavage T-protein C-terminal barrel domain Atep_10490 PF08264 Anticodon-binding domain of tRNA Atep_10490 PF00133 tRNA synthetases class I (I, L, M and V) Atep_10490 PF13603 Leucyl-tRNA synthetase, Domain 2 Atep_10500 PF04390 Lipopolysaccharide-assembly Atep_10510 PF00459 Inositol monophosphatase family Atep_10520 PF01050 Mannose-6-phosphate isomerase Atep_10520 PF00483 Nucleotidyl transferase Atep_10530 PF06071 Protein of unknown function (DUF933) Atep_10530 PF01926 50S ribosome-binding GTPase Atep_10540 PF00571 CBS domain Atep_10540 PF00478 IMP dehydrogenase / GMP reductase domain Atep_10560 PF00872 Transposase, Mutator family Atep_10610 PF00011 Hsp20/alpha crystallin family Atep_10620 PF00011 Hsp20/alpha crystallin family Atep_10630 PF00226 DnaJ domain Atep_10630 PF01556 DnaJ C terminal domain Atep_10650 PF01435 Peptidase family M48 Atep_10660 PF01434 Peptidase family M41 Atep_10660 PF17862 AAA+ lid domain Atep_10660 PF00004 ATPase family associated with various cellular activities (AAA) Atep_10670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atep_10750 PF13411 MerR HTH family regulatory protein Atep_10780 PF02374 Anion-transporting ATPase Atep_10790 PF06953 Arsenical resistance operon trans-acting repressor ArsD Atep_10800 PF01758 Sodium Bile acid symporter family Atep_10820 PF01451 Low molecular weight phosphotyrosine protein phosphatase Atep_10830 PF01022 Bacterial regulatory protein, arsR family Atep_10850 PF02683 Cytochrome C biogenesis protein transmembrane region Atep_10850 PF11412 Disulphide bond corrector protein DsbC Atep_10930 PF00239 Resolvase, N terminal domain Atep_10930 PF02796 Helix-turn-helix domain of resolvase Atep_10940 PF02308 MgtC family Atep_10950 PF00689 Cation transporting ATPase, C-terminus Atep_10950 PF00690 Cation transporter/ATPase, N-terminus Atep_10970 PF07670 Nucleoside recognition Atep_10970 PF07662 Na+ dependent nucleoside transporter C-terminus Atep_10970 PF01773 Na+ dependent nucleoside transporter N-terminus Atep_10980 PF10371 Domain of unknown function Atep_10980 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Atep_10980 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Atep_10980 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Atep_10980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atep_10990 PF01434 Peptidase family M41 Atep_10990 PF06480 FtsH Extracellular Atep_10990 PF17862 AAA+ lid domain Atep_10990 PF00004 ATPase family associated with various cellular activities (AAA) Atep_11040 PF03459 TOBE domain Atep_11040 PF00005 ABC transporter Atep_11050 PF00528 Binding-protein-dependent transport system inner membrane component Atep_11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atep_11090 PF03459 TOBE domain Atep_11130 PF01545 Cation efflux family Atep_11140 PF01925 Sulfite exporter TauE/SafE Atep_11160 PF06463 Molybdenum Cofactor Synthesis C Atep_11160 PF04055 Radical SAM superfamily Atep_11180 PF12849 PBP superfamily domain Atep_11190 PF00672 HAMP domain Atep_11190 PF02203 Tar ligand binding domain homologue Atep_11190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_11200 PF13247 4Fe-4S dicluster domain Atep_11220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atep_11220 PF00384 Molybdopterin oxidoreductase Atep_11220 PF01568 Molydopterin dinucleotide binding domain Atep_11220 PF10518 TAT (twin-arginine translocation) pathway signal sequence Atep_11250 PF02142 MGS-like domain Atep_11280 PF10609 NUBPL iron-transfer P-loop NTPase Atep_11330 PF00512 His Kinase A (phospho-acceptor) domain Atep_11330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_11340 PF00158 Sigma-54 interaction domain Atep_11340 PF00072 Response regulator receiver domain Atep_11340 PF02954 Bacterial regulatory protein, Fis family Atep_11350 PF00899 ThiF family Atep_11440 PF02342 TerD domain Atep_11470 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Atep_11470 PF00749 tRNA synthetases class I (E and Q), catalytic domain Atep_11530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Atep_11540 PF00072 Response regulator receiver domain Atep_11550 PF08443 RimK-like ATP-grasp domain Atep_11550 PF18030 RimK PreATP-grasp domain Atep_11570 PF03631 Virulence factor BrkB Atep_11600 PF01336 OB-fold nucleic acid binding domain Atep_11600 PF07733 Bacterial DNA polymerase III alpha NTPase domain Atep_11600 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Atep_11600 PF14579 Helix-hairpin-helix motif Atep_11600 PF02811 PHP domain Atep_11610 PF01850 PIN domain Atep_11640 PF01139 tRNA-splicing ligase RtcB Atep_11680 PF01370 NAD dependent epimerase/dehydratase family Atep_11690 PF13660 Domain of unknown function (DUF4147) Atep_11690 PF05161 MOFRL family Atep_11710 PF00814 Glycoprotease family Atep_11730 PF00294 pfkB family carbohydrate kinase Atep_11750 PF00664 ABC transporter transmembrane region Atep_11750 PF00005 ABC transporter Atep_11760 PF00664 ABC transporter transmembrane region Atep_11760 PF00005 ABC transporter Atep_11770 PF00886 Ribosomal protein S16 Atep_11780 PF01782 RimM N-terminal domain Atep_11780 PF05239 PRC-barrel domain Atep_11790 PF01746 tRNA (Guanine-1)-methyltransferase Atep_11800 PF01245 Ribosomal protein L19 Atep_11810 PF00929 Exonuclease Atep_11810 PF08411 Exonuclease C-terminal Atep_11820 PF00072 Response regulator receiver domain Atep_11820 PF03861 ANTAR domain Atep_11840 PF01297 Zinc-uptake complex component A periplasmic Atep_11840 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment Atep_11850 PF00005 ABC transporter Atep_11880 PF08267 Cobalamin-independent synthase, N-terminal domain Atep_11880 PF01717 Cobalamin-independent synthase, Catalytic domain Atep_11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atep_11890 PF03466 LysR substrate binding domain Atep_11900 PF00072 Response regulator receiver domain Atep_11930 PF04355 SmpA / OmlA family Atep_11940 PF01475 Ferric uptake regulator family Atep_11970 PF00270 DEAD/DEAH box helicase Atep_11970 PF17757 UvrB interaction domain Atep_11970 PF03461 TRCF domain Atep_11970 PF00271 Helicase conserved C-terminal domain Atep_11970 PF02559 CarD-like/TRCF domain Atep_11980 PF00072 Response regulator receiver domain Atep_11990 PF09078 CheY binding Atep_11990 PF01627 Hpt domain Atep_11990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_11990 PF02895 Signal transducing histidine kinase, homodimeric domain Atep_11990 PF01584 CheW-like domain Atep_12000 PF01584 CheW-like domain Atep_12010 PF03705 CheR methyltransferase, all-alpha domain Atep_12010 PF01739 CheR methyltransferase, SAM binding domain Atep_12020 PF03975 CheD chemotactic sensory transduction Atep_12030 PF02743 Cache domain Atep_12030 PF00672 HAMP domain Atep_12030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_12040 PF01339 CheB methylesterase Atep_12040 PF00072 Response regulator receiver domain Atep_12050 PF13466 STAS domain Atep_12080 PF00291 Pyridoxal-phosphate dependent enzyme Atep_12090 PF01026 TatD related DNase Atep_12110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atep_12120 PF04055 Radical SAM superfamily Atep_12120 PF02310 B12 binding domain Atep_12130 PF07685 CobB/CobQ-like glutamine amidotransferase domain Atep_12140 PF01842 ACT domain Atep_12140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Atep_12140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Atep_12150 PF00800 Prephenate dehydratase Atep_12150 PF01817 Chorismate mutase type II Atep_12150 PF01842 ACT domain Atep_12160 PF00155 Aminotransferase class I and II Atep_12170 PF02153 Prephenate dehydrogenase Atep_12180 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Atep_12190 PF02386 Cation transport protein Atep_12200 PF02080 TrkA-C domain Atep_12200 PF02254 TrkA-N domain Atep_12210 PF00158 Sigma-54 interaction domain Atep_12210 PF02954 Bacterial regulatory protein, Fis family Atep_12210 PF00072 Response regulator receiver domain Atep_12220 PF00989 PAS fold Atep_12220 PF00512 His Kinase A (phospho-acceptor) domain Atep_12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_12220 PF00672 HAMP domain Atep_12240 PF01029 NusB family Atep_12240 PF01189 16S rRNA methyltransferase RsmB/F Atep_12250 PF00551 Formyl transferase Atep_12250 PF02911 Formyl transferase, C-terminal domain Atep_12260 PF01327 Polypeptide deformylase Atep_12270 PF01476 LysM domain Atep_12280 PF17782 DprA winged helix domain Atep_12280 PF02481 DNA recombination-mediator protein A Atep_12300 PF04361 Protein of unknown function (DUF494) Atep_12310 PF13368 Topoisomerase C-terminal repeat Atep_12310 PF01751 Toprim domain Atep_12310 PF01131 DNA topoisomerase Atep_12350 PF17785 PUA-like domain Atep_12350 PF10672 S-adenosylmethionine-dependent methyltransferase Atep_12360 PF03976 Polyphosphate kinase 2 (PPK2) Atep_12370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Atep_12390 PF00990 Diguanylate cyclase, GGDEF domain Atep_12390 PF00072 Response regulator receiver domain Atep_12400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_12400 PF00072 Response regulator receiver domain Atep_12400 PF01627 Hpt domain Atep_12400 PF00672 HAMP domain Atep_12400 PF00512 His Kinase A (phospho-acceptor) domain Atep_12400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_12410 PF03411 Penicillin-insensitive murein endopeptidase Atep_12420 PF02881 SRP54-type protein, helical bundle domain Atep_12420 PF00448 SRP54-type protein, GTPase domain Atep_12420 PF02978 Signal peptide binding domain Atep_12430 PF01578 Cytochrome C assembly protein Atep_12470 PF05175 Methyltransferase small domain Atep_12470 PF17827 PrmC N-terminal domain Atep_12480 PF03441 FAD binding domain of DNA photolyase Atep_12480 PF00875 DNA photolyase Atep_12490 PF00970 Oxidoreductase FAD-binding domain Atep_12490 PF00175 Oxidoreductase NAD-binding domain Atep_12500 PF00255 Glutathione peroxidase Atep_12520 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Atep_12520 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Atep_12530 PF00899 ThiF family Atep_12550 PF01048 Phosphorylase superfamily Atep_12570 PF02576 RimP N-terminal domain Atep_12570 PF17384 RimP C-terminal SH3 domain Atep_12580 PF13184 NusA-like KH domain Atep_12580 PF08529 NusA N-terminal domain Atep_12580 PF00575 S1 RNA binding domain Atep_12590 PF08364 Bacterial translation initiation factor IF-2 associated region Atep_12590 PF04760 Translation initiation factor IF-2, N-terminal region Atep_12590 PF11987 Translation-initiation factor 2 Atep_12590 PF03144 Elongation factor Tu domain 2 Atep_12590 PF00009 Elongation factor Tu GTP binding domain Atep_12600 PF02033 Ribosome-binding factor A Atep_12610 PF16198 tRNA pseudouridylate synthase B C-terminal domain Atep_12610 PF01509 TruB family pseudouridylate synthase (N terminal domain) Atep_12610 PF09157 Pseudouridine synthase II TruB, C-terminal Atep_12620 PF00312 Ribosomal protein S15 Atep_12630 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Atep_12630 PF01138 3' exoribonuclease family, domain 1 Atep_12630 PF03725 3' exoribonuclease family, domain 2 Atep_12630 PF00575 S1 RNA binding domain Atep_12630 PF00013 KH domain Atep_12640 PF14403 Circularly permuted ATP-grasp type 2 Atep_12660 PF08753 NikR C terminal nickel binding domain Atep_12660 PF01402 Ribbon-helix-helix protein, copG family Atep_12730 PF00005 ABC transporter Atep_12760 PF01891 Cobalt uptake substrate-specific transmembrane region Atep_12800 PF13180 PDZ domain Atep_12800 PF00595 PDZ domain Atep_12810 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Atep_12830 PF08241 Methyltransferase domain Atep_12840 PF00561 alpha/beta hydrolase fold Atep_12850 PF00155 Aminotransferase class I and II Atep_12860 PF04055 Radical SAM superfamily Atep_12860 PF06968 Biotin and Thiamin Synthesis associated domain Atep_12870 PF00156 Phosphoribosyl transferase domain Atep_12900 PF17863 AAA lid domain Atep_12900 PF07726 ATPase family associated with various cellular activities (AAA) Atep_12910 PF03144 Elongation factor Tu domain 2 Atep_12910 PF00009 Elongation factor Tu GTP binding domain Atep_12910 PF00679 Elongation factor G C-terminus Atep_12920 PF07715 TonB-dependent Receptor Plug Domain Atep_12920 PF00593 TonB dependent receptor Atep_12930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Atep_12930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Atep_12930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Atep_12940 PF00009 Elongation factor Tu GTP binding domain Atep_12940 PF03144 Elongation factor Tu domain 2 Atep_12940 PF03143 Elongation factor Tu C-terminal domain Atep_12950 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Atep_12960 PF00467 KOW motif Atep_12960 PF02357 Transcription termination factor nusG Atep_12970 PF00298 Ribosomal protein L11, RNA binding domain Atep_12970 PF03946 Ribosomal protein L11, N-terminal domain Atep_12980 PF00687 Ribosomal protein L1p/L10e family Atep_12990 PF00466 Ribosomal protein L10 Atep_13000 PF00542 Ribosomal protein L7/L12 C-terminal domain Atep_13000 PF16320 Ribosomal protein L7/L12 dimerisation domain Atep_13010 PF10385 RNA polymerase beta subunit external 1 domain Atep_13010 PF00562 RNA polymerase Rpb2, domain 6 Atep_13010 PF04563 RNA polymerase beta subunit Atep_13010 PF04560 RNA polymerase Rpb2, domain 7 Atep_13010 PF04565 RNA polymerase Rpb2, domain 3 Atep_13010 PF04561 RNA polymerase Rpb2, domain 2 Atep_13020 PF04997 RNA polymerase Rpb1, domain 1 Atep_13020 PF05000 RNA polymerase Rpb1, domain 4 Atep_13020 PF04998 RNA polymerase Rpb1, domain 5 Atep_13020 PF00623 RNA polymerase Rpb1, domain 2 Atep_13020 PF04983 RNA polymerase Rpb1, domain 3 Atep_13030 PF00164 Ribosomal protein S12/S23 Atep_13040 PF00177 Ribosomal protein S7p/S5e Atep_13050 PF00009 Elongation factor Tu GTP binding domain Atep_13050 PF14492 Elongation Factor G, domain II Atep_13050 PF03764 Elongation factor G, domain IV Atep_13050 PF00679 Elongation factor G C-terminus Atep_13050 PF03144 Elongation factor Tu domain 2 Atep_13060 PF00009 Elongation factor Tu GTP binding domain Atep_13060 PF03144 Elongation factor Tu domain 2 Atep_13060 PF03143 Elongation factor Tu C-terminal domain Atep_13070 PF00338 Ribosomal protein S10p/S20e Atep_13080 PF00297 Ribosomal protein L3 Atep_13090 PF00573 Ribosomal protein L4/L1 family Atep_13100 PF00276 Ribosomal protein L23 Atep_13110 PF00181 Ribosomal Proteins L2, RNA binding domain Atep_13110 PF03947 Ribosomal Proteins L2, C-terminal domain Atep_13120 PF00203 Ribosomal protein S19 Atep_13130 PF00237 Ribosomal protein L22p/L17e Atep_13140 PF07650 KH domain Atep_13140 PF00189 Ribosomal protein S3, C-terminal domain Atep_13150 PF00252 Ribosomal protein L16p/L10e Atep_13160 PF00831 Ribosomal L29 protein Atep_13170 PF00366 Ribosomal protein S17 Atep_13180 PF00238 Ribosomal protein L14p/L23e Atep_13190 PF00467 KOW motif Atep_13190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Atep_13200 PF00281 Ribosomal protein L5 Atep_13200 PF00673 ribosomal L5P family C-terminus Atep_13210 PF00253 Ribosomal protein S14p/S29e Atep_13220 PF00410 Ribosomal protein S8 Atep_13230 PF00347 Ribosomal protein L6 Atep_13240 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Atep_13250 PF00333 Ribosomal protein S5, N-terminal domain Atep_13250 PF03719 Ribosomal protein S5, C-terminal domain Atep_13260 PF00327 Ribosomal protein L30p/L7e Atep_13270 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Atep_13280 PF00344 SecY translocase Atep_13290 PF00416 Ribosomal protein S13/S18 Atep_13300 PF00411 Ribosomal protein S11 Atep_13310 PF00163 Ribosomal protein S4/S9 N-terminal domain Atep_13310 PF01479 S4 domain Atep_13320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Atep_13320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Atep_13320 PF01000 RNA polymerase Rpb3/RpoA insert domain Atep_13330 PF01196 Ribosomal protein L17 Atep_13350 PF00270 DEAD/DEAH box helicase Atep_13350 PF00271 Helicase conserved C-terminal domain Atep_13400 PF07995 Glucose / Sorbosone dehydrogenase Atep_13430 PF00764 Arginosuccinate synthase Atep_13470 PF00909 Ammonium Transporter Family Atep_13480 PF00543 Nitrogen regulatory protein P-II Atep_13500 PF04380 Membrane fusogenic activity Atep_13510 PF13335 Magnesium chelatase, subunit ChlI C-terminal Atep_13510 PF01078 Magnesium chelatase, subunit ChlI Atep_13520 PF00437 Type II/IV secretion system protein Atep_13530 PF00437 Type II/IV secretion system protein Atep_13560 PF09820 Predicted AAA-ATPase Atep_13560 PF08011 PD-(D/E)XK nuclease superfamily Atep_13570 PF04377 Arginine-tRNA-protein transferase, C terminus Atep_13570 PF04376 Arginine-tRNA-protein transferase, N terminus Atep_13580 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Atep_13590 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_13600 PF00877 NlpC/P60 family Atep_13610 PF01355 High potential iron-sulfur protein Atep_13630 PF01728 FtsJ-like methyltransferase Atep_13640 PF17862 AAA+ lid domain Atep_13640 PF01434 Peptidase family M41 Atep_13640 PF06480 FtsH Extracellular Atep_13640 PF00004 ATPase family associated with various cellular activities (AAA) Atep_13650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atep_13650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atep_13650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atep_13650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atep_13660 PF03364 Polyketide cyclase / dehydrase and lipid transport Atep_13670 PF03658 RnfH family Ubiquitin Atep_13680 PF05230 MASE2 domain Atep_13680 PF00990 Diguanylate cyclase, GGDEF domain Atep_13690 PF04509 CheC-like family Atep_13690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Atep_13700 PF00072 Response regulator receiver domain Atep_13710 PF01980 tRNA-methyltransferase O Atep_13710 PF18389 TrmO C-terminal domain Atep_13720 PF01368 DHH family Atep_13720 PF02272 DHHA1 domain Atep_13720 PF00571 CBS domain Atep_13720 PF01743 Poly A polymerase head domain Atep_13730 PF00571 CBS domain Atep_13730 PF01368 DHH family Atep_13730 PF02272 DHHA1 domain Atep_13730 PF12627 Probable RNA and SrmB- binding site of polymerase A Atep_13730 PF01743 Poly A polymerase head domain Atep_13750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Atep_13780 PF00990 Diguanylate cyclase, GGDEF domain Atep_13790 PF00528 Binding-protein-dependent transport system inner membrane component Atep_13800 PF00528 Binding-protein-dependent transport system inner membrane component Atep_13810 PF00005 ABC transporter Atep_13810 PF08402 TOBE domain Atep_13820 PF13416 Bacterial extracellular solute-binding protein Atep_13830 PF00977 Histidine biosynthesis protein Atep_13850 PF13187 4Fe-4S dicluster domain Atep_13850 PF04060 Putative Fe-S cluster Atep_13860 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Atep_13860 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Atep_13860 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Atep_13860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atep_13860 PF10371 Domain of unknown function Atep_13870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atep_13870 PF13237 4Fe-4S dicluster domain Atep_13870 PF10531 SLBB domain Atep_13870 PF13375 RnfC Barrel sandwich hybrid domain Atep_13880 PF03116 NQR2, RnfD, RnfE family Atep_13900 PF02508 Rnf-Nqr subunit, membrane protein Atep_13910 PF02508 Rnf-Nqr subunit, membrane protein Atep_13930 PF01383 CpcD/allophycocyanin linker domain Atep_13930 PF00970 Oxidoreductase FAD-binding domain Atep_13930 PF00175 Oxidoreductase NAD-binding domain Atep_13940 PF06574 FAD synthetase Atep_13940 PF01687 Riboflavin kinase Atep_13950 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus Atep_13950 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Atep_13990 PF17863 AAA lid domain Atep_13990 PF01078 Magnesium chelatase, subunit ChlI Atep_14000 PF17863 AAA lid domain Atep_14030 PF01292 Prokaryotic cytochrome b561 Atep_14060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atep_14100 PF00149 Calcineurin-like phosphoesterase Atep_14120 PF00012 Hsp70 protein Atep_14130 PF08323 Starch synthase catalytic domain Atep_14130 PF00534 Glycosyl transferases group 1 Atep_14140 PF00128 Alpha amylase, catalytic domain Atep_14180 PF13638 PIN domain Atep_14180 PF02562 PhoH-like protein Atep_14190 PF01842 ACT domain Atep_14230 PF01250 Ribosomal protein S6 Atep_14240 PF01084 Ribosomal protein S18 Atep_14260 PF03948 Ribosomal protein L9, C-terminal domain Atep_14260 PF01281 Ribosomal protein L9, N-terminal domain Atep_14270 PF03796 DnaB-like helicase C terminal domain Atep_14270 PF00772 DnaB-like helicase N terminal domain Atep_14290 PF03600 Citrate transporter Atep_14290 PF02080 TrkA-C domain Atep_14320 PF08443 RimK-like ATP-grasp domain Atep_14320 PF18030 RimK PreATP-grasp domain Atep_14330 PF01252 Signal peptidase (SPase) II Atep_14440 PF08264 Anticodon-binding domain of tRNA Atep_14440 PF06827 Zinc finger found in FPG and IleRS Atep_14440 PF00133 tRNA synthetases class I (I, L, M and V) Atep_14450 PF00072 Response regulator receiver domain Atep_14460 PF01209 ubiE/COQ5 methyltransferase family Atep_14490 PF06968 Biotin and Thiamin Synthesis associated domain Atep_14490 PF04055 Radical SAM superfamily Atep_14500 PF06969 HemN C-terminal domain Atep_14500 PF04055 Radical SAM superfamily Atep_14530 PF00535 Glycosyl transferase family 2 Atep_14540 PF16363 GDP-mannose 4,6 dehydratase Atep_14550 PF16363 GDP-mannose 4,6 dehydratase Atep_14570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Atep_14590 PF00890 FAD binding domain Atep_14590 PF02910 Fumarate reductase flavoprotein C-term Atep_14620 PF00708 Acylphosphatase Atep_14620 PF17788 HypF Kae1-like domain Atep_14620 PF01300 Telomere recombination Atep_14620 PF07503 HypF finger Atep_14630 PF01625 Peptide methionine sulfoxide reductase Atep_14640 PF00266 Aminotransferase class-V Atep_14660 PF02954 Bacterial regulatory protein, Fis family Atep_14660 PF00072 Response regulator receiver domain Atep_14660 PF00158 Sigma-54 interaction domain Atep_14670 PF09559 Cas6 Crispr Atep_14700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atep_14700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Atep_14710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Atep_14710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Atep_14720 PF02635 DsrE/DsrF-like family Atep_14730 PF02635 DsrE/DsrF-like family Atep_14750 PF04358 DsrC like protein Atep_14780 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_14780 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Atep_14800 PF13247 4Fe-4S dicluster domain Atep_14820 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atep_14820 PF07685 CobB/CobQ-like glutamine amidotransferase domain Atep_14870 PF02545 Maf-like protein Atep_14880 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Atep_14880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Atep_14890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Atep_14890 PF00128 Alpha amylase, catalytic domain Atep_14900 PF00266 Aminotransferase class-V Atep_14920 PF02310 B12 binding domain Atep_14920 PF02607 B12 binding domain Atep_14920 PF02965 Vitamin B12 dependent methionine synthase, activation domain Atep_14920 PF00809 Pterin binding enzyme Atep_14920 PF02574 Homocysteine S-methyltransferase Atep_14950 PF00733 Asparagine synthase Atep_14950 PF13537 Glutamine amidotransferase domain Atep_14960 PF00733 Asparagine synthase Atep_14960 PF13537 Glutamine amidotransferase domain Atep_14990 PF00595 PDZ domain Atep_14990 PF13180 PDZ domain Atep_15000 PF12804 MobA-like NTP transferase domain Atep_15010 PF03190 Protein of unknown function, DUF255 Atep_15030 PF00005 ABC transporter Atep_15040 PF13472 GDSL-like Lipase/Acylhydrolase family Atep_15070 PF07549 SecD/SecF GG Motif Atep_15070 PF02355 Protein export membrane protein Atep_15080 PF07549 SecD/SecF GG Motif Atep_15080 PF13721 SecD export protein N-terminal TM region Atep_15080 PF02355 Protein export membrane protein Atep_15090 PF02699 Preprotein translocase subunit Atep_15120 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) Atep_15130 PF05958 tRNA (Uracil-5-)-methyltransferase Atep_15160 PF08482 ATP-dependent helicase C-terminal Atep_15160 PF00271 Helicase conserved C-terminal domain Atep_15160 PF04408 Helicase associated domain (HA2) Atep_15160 PF00270 DEAD/DEAH box helicase Atep_15170 PF00194 Eukaryotic-type carbonic anhydrase Atep_15190 PF02446 4-alpha-glucanotransferase Atep_15220 PF00149 Calcineurin-like phosphoesterase Atep_15240 PF00005 ABC transporter Atep_15240 PF08402 TOBE domain Atep_15280 PF01624 MutS domain I Atep_15280 PF05188 MutS domain II Atep_15280 PF05192 MutS domain III Atep_15280 PF05190 MutS family domain IV Atep_15280 PF00488 MutS domain V Atep_15290 PF00691 OmpA family Atep_15290 PF05736 OprF membrane domain Atep_15320 PF00005 ABC transporter Atep_15330 PF01061 ABC-2 type transporter Atep_15340 PF00905 Penicillin binding protein transpeptidase domain Atep_15340 PF00912 Transglycosylase Atep_15340 PF14814 Bifunctional transglycosylase second domain Atep_15360 PF01747 ATP-sulfurylase Atep_15360 PF14306 PUA-like domain Atep_15380 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit Atep_15380 PF13187 4Fe-4S dicluster domain Atep_15390 PF00890 FAD binding domain Atep_15410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Atep_15420 PF03481 Putative GTP-binding controlling metal-binding Atep_15420 PF01300 Telomere recombination Atep_15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atep_15430 PF03466 LysR substrate binding domain Atep_15510 PF13307 Helicase C-terminal domain Atep_15510 PF04851 Type III restriction enzyme, res subunit Atep_15540 PF18073 Rubredoxin metal binding domain Atep_15560 PF00005 ABC transporter Atep_15570 PF01297 Zinc-uptake complex component A periplasmic Atep_15600 PF09382 RQC domain Atep_15600 PF16124 RecQ zinc-binding Atep_15600 PF00270 DEAD/DEAH box helicase Atep_15600 PF00271 Helicase conserved C-terminal domain Atep_15600 PF00570 HRDC domain Atep_15610 PF00485 Phosphoribulokinase / Uridine kinase family Atep_15630 PF02508 Rnf-Nqr subunit, membrane protein Atep_15640 PF04205 FMN-binding domain Atep_15650 PF03116 NQR2, RnfD, RnfE family Atep_15660 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Atep_15660 PF01243 Pyridoxamine 5'-phosphate oxidase Atep_15670 PF00463 Isocitrate lyase family Atep_15680 PF03477 ATP cone domain Atep_15680 PF00317 Ribonucleotide reductase, all-alpha domain Atep_15680 PF02867 Ribonucleotide reductase, barrel domain Atep_15690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Atep_15690 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Atep_15700 PF13443 Cro/C1-type HTH DNA-binding domain Atep_15700 PF00717 Peptidase S24-like Atep_15710 PF00005 ABC transporter Atep_15710 PF00664 ABC transporter transmembrane region Atep_15730 PF02674 Colicin V production protein Atep_15750 PF01636 Phosphotransferase enzyme family Atep_15760 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atep_15770 PF00268 Ribonucleotide reductase, small chain Atep_15780 PF13085 2Fe-2S iron-sulfur cluster binding domain Atep_15810 PF16363 GDP-mannose 4,6 dehydratase Atep_15820 PF00692 dUTPase Atep_15820 PF00692 dUTPase Atep_15830 PF01985 CRS1 / YhbY (CRM) domain Atep_15840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atep_15850 PF02224 Cytidylate kinase Atep_15860 PF00575 S1 RNA binding domain Atep_15870 PF00216 Bacterial DNA-binding protein Atep_15880 PF11808 Phosphate regulon sensor protein PhoR Atep_15880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_15880 PF00512 His Kinase A (phospho-acceptor) domain Atep_15880 PF00989 PAS fold Atep_15890 PF00072 Response regulator receiver domain Atep_15890 PF00486 Transcriptional regulatory protein, C terminal Atep_15900 PF00293 NUDIX domain Atep_15940 PF00551 Formyl transferase Atep_15950 PF02769 AIR synthase related protein, C-terminal domain Atep_15950 PF00586 AIR synthase related protein, N-terminal domain Atep_15960 PF01066 CDP-alcohol phosphatidyltransferase Atep_15970 PF00308 Bacterial dnaA protein Atep_15980 PF03358 NADPH-dependent FMN reductase Atep_15990 PF00708 Acylphosphatase Atep_16000 PF00149 Calcineurin-like phosphoesterase Atep_16040 PF01479 S4 domain Atep_16050 PF00462 Glutaredoxin Atep_16060 PF11940 Domain of unknown function (DUF3458) Ig-like fold Atep_16060 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Atep_16060 PF01433 Peptidase family M1 domain Atep_16080 PF00156 Phosphoribosyl transferase domain Atep_16090 PF01053 Cys/Met metabolism PLP-dependent enzyme Atep_16130 PF00990 Diguanylate cyclase, GGDEF domain Atep_16140 PF00072 Response regulator receiver domain Atep_16140 PF00158 Sigma-54 interaction domain Atep_16150 PF01584 CheW-like domain Atep_16150 PF00072 Response regulator receiver domain Atep_16150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_16150 PF01627 Hpt domain Atep_16160 PF01739 CheR methyltransferase, SAM binding domain Atep_16160 PF03705 CheR methyltransferase, all-alpha domain Atep_16170 PF00072 Response regulator receiver domain Atep_16170 PF01339 CheB methylesterase Atep_16180 PF00672 HAMP domain Atep_16180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_16220 PF17962 Bacterial macroglobulin domain 6 Atep_16220 PF00207 Alpha-2-macroglobulin family Atep_16220 PF01835 MG2 domain Atep_16220 PF07703 Alpha-2-macroglobulin bait region domain Atep_16220 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain Atep_16220 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Atep_16220 PF11974 Bacterial alpha-2-macroglobulin MG3 domain Atep_16220 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain Atep_16240 PF01909 Nucleotidyltransferase domain Atep_16260 PF00004 ATPase family associated with various cellular activities (AAA) Atep_16260 PF07724 AAA domain (Cdc48 subfamily) Atep_16260 PF17871 AAA lid domain Atep_16260 PF02861 Clp amino terminal domain, pathogenicity island component Atep_16260 PF10431 C-terminal, D2-small domain, of ClpB protein Atep_16270 PF02617 ATP-dependent Clp protease adaptor protein ClpS Atep_16280 PF00313 'Cold-shock' DNA-binding domain Atep_16290 PF00180 Isocitrate/isopropylmalate dehydrogenase Atep_16300 PF07690 Major Facilitator Superfamily Atep_16310 PF01773 Na+ dependent nucleoside transporter N-terminus Atep_16310 PF07662 Na+ dependent nucleoside transporter C-terminus Atep_16310 PF07670 Nucleoside recognition Atep_16320 PF01430 Hsp33 protein Atep_16330 PF00072 Response regulator receiver domain Atep_16340 PF00390 Malic enzyme, N-terminal domain Atep_16340 PF01515 Phosphate acetyl/butaryl transferase Atep_16340 PF03949 Malic enzyme, NAD binding domain Atep_16350 PF01595 Cyclin M transmembrane N-terminal domain Atep_16350 PF03471 Transporter associated domain Atep_16350 PF00571 CBS domain Atep_16360 PF04381 Putative exonuclease, RdgC Atep_16370 PF12838 4Fe-4S dicluster domain Atep_16370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atep_16370 PF13375 RnfC Barrel sandwich hybrid domain Atep_16370 PF10531 SLBB domain Atep_16380 PF04060 Putative Fe-S cluster Atep_16390 PF02508 Rnf-Nqr subunit, membrane protein Atep_16410 PF00361 Proton-conducting membrane transporter Atep_16420 PF00361 Proton-conducting membrane transporter Atep_16430 PF00361 Proton-conducting membrane transporter Atep_16460 PF00361 Proton-conducting membrane transporter Atep_16530 PF01022 Bacterial regulatory protein, arsR family Atep_16590 PF00535 Glycosyl transferase family 2 Atep_16610 PF02463 RecF/RecN/SMC N terminal domain Atep_16630 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Atep_16650 PF00850 Histone deacetylase domain Atep_16660 PF13380 CoA binding domain Atep_16660 PF00583 Acetyltransferase (GNAT) family Atep_16660 PF13607 Succinyl-CoA ligase like flavodoxin domain Atep_16700 PF02623 FliW protein Atep_16710 PF00581 Rhodanese-like domain Atep_16730 PF00398 Ribosomal RNA adenine dimethylase Atep_16750 PF00672 HAMP domain Atep_16750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_16750 PF17202 Single cache domain 3 Atep_16760 PF00072 Response regulator receiver domain Atep_16780 PF03975 CheD chemotactic sensory transduction Atep_16800 PF01339 CheB methylesterase Atep_16800 PF00072 Response regulator receiver domain Atep_16810 PF12729 Four helix bundle sensory module for signal transduction Atep_16810 PF00672 HAMP domain Atep_16810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_16820 PF02803 Thiolase, C-terminal domain Atep_16820 PF00108 Thiolase, N-terminal domain Atep_16920 PF00005 ABC transporter Atep_16930 PF00950 ABC 3 transport family Atep_16940 PF01475 Ferric uptake regulator family Atep_16990 PF00580 UvrD/REP helicase N-terminal domain Atep_16990 PF13361 UvrD-like helicase C-terminal domain Atep_17060 PF01367 5'-3' exonuclease, C-terminal SAM fold Atep_17060 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Atep_17060 PF00476 DNA polymerase family A Atep_17060 PF01612 3'-5' exonuclease Atep_17080 PF02685 Glucokinase Atep_17090 PF01103 Surface antigen Atep_17090 PF07244 Surface antigen variable number repeat Atep_17090 PF17243 POTRA domain TamA domain 1 Atep_17100 PF04357 TamB, inner membrane protein subunit of TAM complex Atep_17110 PF03279 Bacterial lipid A biosynthesis acyltransferase Atep_17140 PF06470 SMC proteins Flexible Hinge Domain Atep_17140 PF02463 RecF/RecN/SMC N terminal domain Atep_17150 PF04055 Radical SAM superfamily Atep_17160 PF00501 AMP-binding enzyme Atep_17180 PF00343 Carbohydrate phosphorylase Atep_17190 PF08442 ATP-grasp domain Atep_17190 PF00549 CoA-ligase Atep_17200 PF00549 CoA-ligase Atep_17200 PF02629 CoA binding domain Atep_17210 PF00266 Aminotransferase class-V Atep_17220 PF04358 DsrC like protein Atep_17250 PF04545 Sigma-70, region 4 Atep_17250 PF04542 Sigma-70 region 2 Atep_17250 PF04539 Sigma-70 region 3 Atep_17250 PF03979 Sigma-70 factor, region 1.1 Atep_17250 PF04546 Sigma-70, non-essential region Atep_17250 PF00140 Sigma-70 factor, region 1.2 Atep_17260 PF10410 DnaB-helicase binding domain of primase Atep_17260 PF08278 DNA primase DnaG DnaB-binding Atep_17260 PF08275 DNA primase catalytic core, N-terminal domain Atep_17260 PF01807 CHC2 zinc finger Atep_17260 PF13662 Toprim domain Atep_17280 PF01165 Ribosomal protein S21 Atep_17290 PF00814 Glycoprotease family Atep_17300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_17300 PF00512 His Kinase A (phospho-acceptor) domain Atep_17300 PF00989 PAS fold Atep_17310 PF02660 Glycerol-3-phosphate acyltransferase Atep_17350 PF18273 Type III R-M EcoP15I C-terminal domain Atep_17350 PF01555 DNA methylase Atep_17380 PF02374 Anion-transporting ATPase Atep_17400 PF05685 Putative restriction endonuclease Atep_17410 PF06463 Molybdenum Cofactor Synthesis C Atep_17410 PF04055 Radical SAM superfamily Atep_17420 PF03471 Transporter associated domain Atep_17420 PF00999 Sodium/hydrogen exchanger family Atep_17420 PF02080 TrkA-C domain Atep_17430 PF00106 short chain dehydrogenase Atep_17440 PF13419 Haloacid dehalogenase-like hydrolase Atep_17470 PF00563 EAL domain Atep_17470 PF01590 GAF domain Atep_17470 PF00990 Diguanylate cyclase, GGDEF domain Atep_17470 PF00989 PAS fold Atep_17480 PF00171 Aldehyde dehydrogenase family Atep_17490 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_17510 PF01467 Cytidylyltransferase-like Atep_17530 PF00186 Dihydrofolate reductase Atep_17540 PF00149 Calcineurin-like phosphoesterase Atep_17550 PF04379 ApaG domain Atep_17570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Atep_17570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Atep_17600 PF00211 Adenylate and Guanylate cyclase catalytic domain Atep_17610 PF00672 HAMP domain Atep_17610 PF07228 Stage II sporulation protein E (SpoIIE) Atep_17620 PF00497 Bacterial extracellular solute-binding proteins, family 3 Atep_17630 PF00375 Sodium:dicarboxylate symporter family Atep_17650 PF01740 STAS domain Atep_17660 PF13581 Histidine kinase-like ATPase domain Atep_17670 PF02321 Outer membrane efflux protein Atep_17680 PF01264 Chorismate synthase Atep_17690 PF12832 MFS_1 like family Atep_17700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Atep_17700 PF00128 Alpha amylase, catalytic domain Atep_17730 PF00534 Glycosyl transferases group 1 Atep_17730 PF08323 Starch synthase catalytic domain Atep_17750 PF00809 Pterin binding enzyme Atep_17760 PF17092 Penicillin-binding protein OB-like domain Atep_17760 PF00905 Penicillin binding protein transpeptidase domain Atep_17760 PF00912 Transglycosylase Atep_17770 PF00155 Aminotransferase class I and II Atep_17780 PF01842 ACT domain Atep_17780 PF00742 Homoserine dehydrogenase Atep_17780 PF03447 Homoserine dehydrogenase, NAD binding domain Atep_17790 PF02673 Bacitracin resistance protein BacA Atep_17830 PF17674 HHH domain Atep_17830 PF00575 S1 RNA binding domain Atep_17830 PF09371 Tex-like protein N-terminal domain Atep_17830 PF16921 Tex protein YqgF-like domain Atep_17850 PF01053 Cys/Met metabolism PLP-dependent enzyme Atep_17870 PF02599 Global regulator protein family Atep_17880 PF01842 ACT domain Atep_17880 PF13840 ACT domain Atep_17880 PF00696 Amino acid kinase family Atep_17890 PF01411 tRNA synthetases class II (A) Atep_17890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atep_17890 PF02272 DHHA1 domain Atep_17900 PF02631 RecX family Atep_17910 PF03161 LAGLIDADG DNA endonuclease family Atep_17910 PF00154 recA bacterial DNA recombination protein Atep_17920 PF02464 Competence-damaged protein Atep_17960 PF00364 Biotin-requiring enzyme Atep_17960 PF00682 HMGL-like Atep_17960 PF02436 Conserved carboxylase domain Atep_17970 PF02785 Biotin carboxylase C-terminal domain Atep_17970 PF00289 Biotin carboxylase, N-terminal domain Atep_17970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atep_17980 PF01066 CDP-alcohol phosphatidyltransferase Atep_17990 PF01541 GIY-YIG catalytic domain Atep_17990 PF02151 UvrB/uvrC motif Atep_17990 PF08459 UvrC Helix-hairpin-helix N-terminal Atep_18020 PF02690 Na+/Pi-cotransporter Atep_18050 PF01928 CYTH domain Atep_18060 PF03737 Aldolase/RraA Atep_18070 PF01027 Inhibitor of apoptosis-promoting Bax1 Atep_18100 PF00893 Small Multidrug Resistance protein Atep_18130 PF00202 Aminotransferase class-III Atep_18140 PF01926 50S ribosome-binding GTPase Atep_18140 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Atep_18160 PF00709 Adenylosuccinate synthetase Atep_18170 PF13393 Histidyl-tRNA synthetase Atep_18190 PF01145 SPFH domain / Band 7 family Atep_18200 PF01145 SPFH domain / Band 7 family Atep_18200 PF12221 Bacterial membrane protein N terminal Atep_18210 PF16360 GTP-binding GTPase Middle Region Atep_18210 PF13167 GTP-binding GTPase N-terminal Atep_18210 PF01926 50S ribosome-binding GTPase Atep_18220 PF17209 Hfq protein Atep_18240 PF01119 DNA mismatch repair protein, C-terminal domain Atep_18240 PF08676 MutL C terminal dimerisation domain Atep_18250 PF01520 N-acetylmuramoyl-L-alanine amidase Atep_18250 PF11741 AMIN domain Atep_18260 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Atep_18270 PF03853 YjeF-related protein N-terminus Atep_18270 PF01256 Carbohydrate kinase Atep_18290 PF03129 Anticodon binding domain Atep_18290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atep_18290 PF04073 Aminoacyl-tRNA editing domain Atep_18300 PF07977 FabA-like domain Atep_18320 PF00072 Response regulator receiver domain Atep_18330 PF03989 DNA gyrase C-terminal domain, beta-propeller Atep_18330 PF00521 DNA gyrase/topoisomerase IV, subunit A Atep_18340 PF01966 HD domain Atep_18340 PF01743 Poly A polymerase head domain Atep_18340 PF12627 Probable RNA and SrmB- binding site of polymerase A Atep_18380 PF00990 Diguanylate cyclase, GGDEF domain Atep_18420 PF00210 Ferritin-like domain Atep_18440 PF10609 NUBPL iron-transfer P-loop NTPase Atep_18450 PF09334 tRNA synthetases class I (M) Atep_18450 PF01588 Putative tRNA binding domain Atep_18530 PF03050 Transposase IS66 family Atep_18540 PF00155 Aminotransferase class I and II Atep_18550 PF00271 Helicase conserved C-terminal domain Atep_18550 PF04851 Type III restriction enzyme, res subunit Atep_18550 PF02151 UvrB/uvrC motif Atep_18550 PF12344 Ultra-violet resistance protein B Atep_18550 PF17757 UvrB interaction domain Atep_18580 PF03167 Uracil DNA glycosylase superfamily Atep_18590 PF00682 HMGL-like Atep_18590 PF08502 LeuA allosteric (dimerisation) domain Atep_18600 PF00004 ATPase family associated with various cellular activities (AAA) Atep_18600 PF17862 AAA+ lid domain Atep_18600 PF06480 FtsH Extracellular Atep_18600 PF01434 Peptidase family M41 Atep_18620 PF01556 DnaJ C terminal domain Atep_18620 PF00226 DnaJ domain Atep_18630 PF07556 Protein of unknown function (DUF1538) Atep_18640 PF00571 CBS domain Atep_18650 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Atep_18650 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Atep_18660 PF01510 N-acetylmuramoyl-L-alanine amidase Atep_18690 PF00849 RNA pseudouridylate synthase Atep_18720 PF04358 DsrC like protein Atep_18730 PF08241 Methyltransferase domain Atep_18730 PF12697 Alpha/beta hydrolase family Atep_18740 PF03600 Citrate transporter Atep_18750 PF13244 Domain of unknown function (DUF4040) Atep_18750 PF00361 Proton-conducting membrane transporter Atep_18750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atep_18760 PF00146 NADH dehydrogenase Atep_18790 PF00872 Transposase, Mutator family Atep_18800 PF00872 Transposase, Mutator family Atep_18810 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atep_18820 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Atep_18830 PF00374 Nickel-dependent hydrogenase Atep_18830 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Atep_18850 PF01895 PhoU domain Atep_18870 PF00361 Proton-conducting membrane transporter Atep_18880 PF00146 NADH dehydrogenase Atep_18900 PF00361 Proton-conducting membrane transporter Atep_18910 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Atep_18910 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Atep_18920 PF00571 CBS domain Atep_18920 PF03471 Transporter associated domain Atep_18930 PF02130 Uncharacterized protein family UPF0054 Atep_18940 PF02562 PhoH-like protein Atep_18950 PF00919 Uncharacterized protein family UPF0004 Atep_18950 PF04055 Radical SAM superfamily Atep_18950 PF01938 TRAM domain Atep_18960 PF00266 Aminotransferase class-V Atep_18970 PF03989 DNA gyrase C-terminal domain, beta-propeller Atep_18970 PF00521 DNA gyrase/topoisomerase IV, subunit A Atep_18980 PF00563 EAL domain Atep_18980 PF00990 Diguanylate cyclase, GGDEF domain Atep_18980 PF03707 Bacterial signalling protein N terminal repeat Atep_18990 PF01008 Initiation factor 2 subunit family Atep_19000 PF01979 Amidohydrolase family Atep_19010 PF02666 Phosphatidylserine decarboxylase Atep_19020 PF03692 Putative zinc- or iron-chelating domain Atep_19030 PF00005 ABC transporter Atep_19030 PF17755 UvrA DNA-binding domain Atep_19030 PF17760 UvrA interaction domain Atep_19060 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_19070 PF05981 CreA protein Atep_19080 PF03330 Lytic transglycolase Atep_19100 PF04293 SpoVR like protein Atep_19110 PF04285 Protein of unknown function (DUF444) Atep_19120 PF06798 PrkA serine protein kinase C-terminal domain Atep_19120 PF08298 PrkA AAA domain Atep_19130 PF00291 Pyridoxal-phosphate dependent enzyme Atep_19130 PF00585 C-terminal regulatory domain of Threonine dehydratase Atep_19140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Atep_19140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Atep_19140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Atep_19150 PF01370 NAD dependent epimerase/dehydratase family Atep_19170 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Atep_19180 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Atep_19190 PF11967 Recombination protein O N terminal Atep_19190 PF02565 Recombination protein O C terminal Atep_19200 PF07650 KH domain Atep_19200 PF01926 50S ribosome-binding GTPase Atep_19210 PF00035 Double-stranded RNA binding motif Atep_19210 PF14622 Ribonuclease-III-like Atep_19230 PF10502 Signal peptidase, peptidase S26 Atep_19240 PF00679 Elongation factor G C-terminus Atep_19240 PF06421 GTP-binding protein LepA C-terminus Atep_19240 PF00009 Elongation factor Tu GTP binding domain Atep_19250 PF13180 PDZ domain Atep_19250 PF17820 PDZ domain Atep_19270 PF17188 MucB/RseB C-terminal domain Atep_19270 PF03888 MucB/RseB N-terminal domain Atep_19290 PF04542 Sigma-70 region 2 Atep_19290 PF08281 Sigma-70, region 4 Atep_19300 PF00890 FAD binding domain Atep_19300 PF02910 Fumarate reductase flavoprotein C-term Atep_19330 PF05173 Dihydrodipicolinate reductase, C-terminus Atep_19330 PF01113 Dihydrodipicolinate reductase, N-terminus Atep_19340 PF00873 AcrB/AcrD/AcrF family Atep_19360 PF00501 AMP-binding enzyme Atep_19370 PF10576 Iron-sulfur binding domain of endonuclease III Atep_19370 PF00633 Helix-hairpin-helix motif Atep_19370 PF00730 HhH-GPD superfamily base excision DNA repair protein Atep_19370 PF14815 NUDIX domain Atep_19380 PF04362 Bacterial Fe(2+) trafficking Atep_19390 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Atep_19390 PF02769 AIR synthase related protein, C-terminal domain Atep_19390 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Atep_19400 PF00588 SpoU rRNA Methylase family Atep_19400 PF08032 RNA 2'-O ribose methyltransferase substrate binding Atep_19410 PF00575 S1 RNA binding domain Atep_19410 PF00773 RNB domain Atep_19410 PF08206 Ribonuclease B OB domain Atep_19410 PF08461 Ribonuclease R winged-helix domain Atep_19410 PF17876 Cold shock domain Atep_19420 PF08328 Adenylosuccinate lyase C-terminal Atep_19420 PF00206 Lyase Atep_19430 PF01740 STAS domain Atep_19440 PF02401 LytB protein Atep_19450 PF01266 FAD dependent oxidoreductase Atep_19460 PF08011 PD-(D/E)XK nuclease superfamily Atep_19460 PF09820 Predicted AAA-ATPase Atep_19470 PF02875 Mur ligase family, glutamate ligase domain Atep_19470 PF08245 Mur ligase middle domain Atep_19570 PF17848 Acetyl-coA carboxylase zinc finger domain Atep_19570 PF01039 Carboxyl transferase domain Atep_19580 PF00290 Tryptophan synthase alpha chain Atep_19590 PF00291 Pyridoxal-phosphate dependent enzyme Atep_19600 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Atep_19610 PF01416 tRNA pseudouridine synthase Atep_19630 PF02774 Semialdehyde dehydrogenase, dimerisation domain Atep_19630 PF01118 Semialdehyde dehydrogenase, NAD binding domain Atep_19640 PF00180 Isocitrate/isopropylmalate dehydrogenase Atep_19650 PF02086 D12 class N6 adenine-specific DNA methyltransferase Atep_19670 PF00694 Aconitase C-terminal domain Atep_19680 PF00330 Aconitase family (aconitate hydratase) Atep_19710 PF04989 Cephalosporin hydroxylase Atep_19730 PF05050 Methyltransferase FkbM domain Atep_19740 PF04055 Radical SAM superfamily Atep_19740 PF01938 TRAM domain Atep_19740 PF00919 Uncharacterized protein family UPF0004 Atep_19780 PF00534 Glycosyl transferases group 1 Atep_19780 PF13579 Glycosyl transferase 4-like domain Atep_19820 PF01370 NAD dependent epimerase/dehydratase family Atep_19840 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Atep_19850 PF16363 GDP-mannose 4,6 dehydratase Atep_19860 PF00483 Nucleotidyl transferase Atep_19870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atep_19870 PF02403 Seryl-tRNA synthetase N-terminal domain Atep_19900 PF00483 Nucleotidyl transferase Atep_19910 PF01467 Cytidylyltransferase-like Atep_19910 PF00294 pfkB family carbohydrate kinase Atep_19920 PF01522 Polysaccharide deacetylase Atep_19940 PF04356 Protein of unknown function (DUF489) Atep_19950 PF00330 Aconitase family (aconitate hydratase) Atep_19950 PF00694 Aconitase C-terminal domain Atep_19970 PF00149 Calcineurin-like phosphoesterase Atep_19980 PF00563 EAL domain Atep_19980 PF00990 Diguanylate cyclase, GGDEF domain Atep_19980 PF00072 Response regulator receiver domain Atep_20000 PF04608 Phosphatidylglycerophosphatase A Atep_20010 PF02769 AIR synthase related protein, C-terminal domain Atep_20010 PF00586 AIR synthase related protein, N-terminal domain Atep_20020 PF01029 NusB family Atep_20030 PF00885 6,7-dimethyl-8-ribityllumazine synthase Atep_20040 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Atep_20040 PF00925 GTP cyclohydrolase II Atep_20050 PF00677 Lumazine binding domain Atep_20060 PF01872 RibD C-terminal domain Atep_20060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Atep_20070 PF03477 ATP cone domain Atep_20080 PF00464 Serine hydroxymethyltransferase Atep_20100 PF00561 alpha/beta hydrolase fold Atep_20110 PF02348 Cytidylyltransferase Atep_20120 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Atep_20130 PF00664 ABC transporter transmembrane region Atep_20130 PF00005 ABC transporter Atep_20140 PF02472 Biopolymer transport protein ExbD/TolR Atep_20150 PF01618 MotA/TolQ/ExbB proton channel family Atep_20170 PF00175 Oxidoreductase NAD-binding domain Atep_20170 PF00111 2Fe-2S iron-sulfur cluster binding domain Atep_20170 PF00970 Oxidoreductase FAD-binding domain Atep_20190 PF00270 DEAD/DEAH box helicase Atep_20190 PF11898 Domain of unknown function (DUF3418) Atep_20190 PF04408 Helicase associated domain (HA2) Atep_20190 PF00271 Helicase conserved C-terminal domain Atep_20190 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Atep_20200 PF00990 Diguanylate cyclase, GGDEF domain Atep_20200 PF00072 Response regulator receiver domain Atep_20210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Atep_20240 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Atep_20240 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Atep_20260 PF01678 Diaminopimelate epimerase Atep_20280 PF02899 Phage integrase, N-terminal SAM-like domain Atep_20280 PF00589 Phage integrase family Atep_20360 PF00403 Heavy-metal-associated domain Atep_20440 PF01063 Amino-transferase class IV Atep_20450 PF08335 GlnD PII-uridylyltransferase Atep_20450 PF03710 Glutamate-ammonia ligase adenylyltransferase Atep_20460 PF01263 Aldose 1-epimerase Atep_20470 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Atep_20490 PF00391 PEP-utilising enzyme, mobile domain Atep_20490 PF02896 PEP-utilising enzyme, TIM barrel domain Atep_20490 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Atep_20500 PF08264 Anticodon-binding domain of tRNA Atep_20500 PF00133 tRNA synthetases class I (I, L, M and V) Atep_20500 PF10458 Valyl tRNA synthetase tRNA binding arm Atep_20530 PF13203 Putative metallopeptidase domain Atep_20530 PF09967 VWA-like domain (DUF2201) Atep_20540 PF01435 Peptidase family M48 Atep_20580 PF14489 QueF-like protein Atep_20590 PF03193 RsgA GTPase Atep_20620 PF02441 Flavoprotein Atep_20630 PF08245 Mur ligase middle domain Atep_20630 PF01225 Mur ligase family, catalytic domain Atep_20630 PF02875 Mur ligase family, glutamate ligase domain Atep_20660 PF03186 CobD/Cbib protein Atep_20680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atep_20690 PF14537 Cytochrome c3 Atep_20690 PF00890 FAD binding domain Atep_20700 PF00990 Diguanylate cyclase, GGDEF domain Atep_20700 PF03707 Bacterial signalling protein N terminal repeat Atep_20700 PF00563 EAL domain Atep_20720 PF02571 Precorrin-6x reductase CbiJ/CobK Atep_20740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atep_20750 PF02570 Precorrin-8X methylmutase Atep_20780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atep_20790 PF00563 EAL domain Atep_20790 PF00990 Diguanylate cyclase, GGDEF domain Atep_20800 PF00403 Heavy-metal-associated domain Atep_20810 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Atep_20810 PF07685 CobB/CobQ-like glutamine amidotransferase domain Atep_20820 PF08496 Peptidase family S49 N-terminal Atep_20820 PF01343 Peptidase family S49 Atep_20830 PF00303 Thymidylate synthase Atep_20840 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Atep_20840 PF01676 Metalloenzyme superfamily Atep_20850 PF00696 Amino acid kinase family Atep_20850 PF00583 Acetyltransferase (GNAT) family Atep_20860 PF12795 Mechanosensitive ion channel porin domain Atep_20860 PF00924 Mechanosensitive ion channel Atep_20860 PF12794 Mechanosensitive ion channel inner membrane domain 1 Atep_20880 PF00999 Sodium/hydrogen exchanger family Atep_20880 PF02254 TrkA-N domain Atep_20880 PF02080 TrkA-C domain Atep_20890 PF01026 TatD related DNase Atep_20900 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) Atep_20930 PF00753 Metallo-beta-lactamase superfamily Atep_20950 PF04551 GcpE protein Atep_20960 PF00293 NUDIX domain Atep_20970 PF03618 Kinase/pyrophosphorylase Atep_20980 PF00483 Nucleotidyl transferase Atep_21010 PF01066 CDP-alcohol phosphatidyltransferase Atep_21030 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Atep_21030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Atep_21030 PF00037 4Fe-4S binding domain Atep_21040 PF12838 4Fe-4S dicluster domain Atep_21040 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Atep_21040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Atep_21040 PF00384 Molybdopterin oxidoreductase Atep_21040 PF01568 Molydopterin dinucleotide binding domain Atep_21050 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atep_21060 PF00374 Nickel-dependent hydrogenase Atep_21080 PF12323 Helix-turn-helix domain Atep_21080 PF01385 Probable transposase Atep_21080 PF07282 Putative transposase DNA-binding domain Atep_21140 PF00176 SNF2 family N-terminal domain Atep_21140 PF00271 Helicase conserved C-terminal domain Atep_21160 PF01385 Probable transposase Atep_21160 PF07282 Putative transposase DNA-binding domain Atep_21160 PF12323 Helix-turn-helix domain Atep_21180 PF01797 Transposase IS200 like Atep_21190 PF12323 Helix-turn-helix domain Atep_21190 PF07282 Putative transposase DNA-binding domain Atep_21190 PF01385 Probable transposase Atep_21210 PF13649 Methyltransferase domain Atep_21220 PF00700 Bacterial flagellin C-terminal helical region Atep_21220 PF00669 Bacterial flagellin N-terminal helical region Atep_21240 PF07195 Flagellar hook-associated protein 2 C-terminus Atep_21240 PF02465 Flagellar hook-associated protein 2 N-terminus Atep_21250 PF02561 Flagellar protein FliS Atep_21270 PF00155 Aminotransferase class I and II Atep_21280 PF00535 Glycosyl transferase family 2 Atep_21290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atep_21290 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_21300 PF03548 Outer membrane lipoprotein carrier protein LolA Atep_21310 PF01580 FtsK/SpoIIIE family Atep_21310 PF17854 FtsK alpha domain Atep_21310 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Atep_21310 PF09397 Ftsk gamma domain Atep_21320 PF00313 'Cold-shock' DNA-binding domain Atep_21340 PF00210 Ferritin-like domain Atep_21360 PF00005 ABC transporter Atep_21360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Atep_21370 PF00528 Binding-protein-dependent transport system inner membrane component Atep_21370 PF12911 N-terminal TM domain of oligopeptide transport permease C Atep_21380 PF00528 Binding-protein-dependent transport system inner membrane component Atep_21410 PF13145 PPIC-type PPIASE domain Atep_21420 PF00216 Bacterial DNA-binding protein Atep_21430 PF00004 ATPase family associated with various cellular activities (AAA) Atep_21430 PF02190 ATP-dependent protease La (LON) substrate-binding domain Atep_21430 PF05362 Lon protease (S16) C-terminal proteolytic domain Atep_21440 PF10431 C-terminal, D2-small domain, of ClpB protein Atep_21440 PF06689 ClpX C4-type zinc finger Atep_21440 PF07724 AAA domain (Cdc48 subfamily) Atep_21450 PF00574 Clp protease Atep_21460 PF05697 Bacterial trigger factor protein (TF) Atep_21460 PF05698 Bacterial trigger factor protein (TF) C-terminus Atep_21460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Atep_21470 PF04055 Radical SAM superfamily Atep_21470 PF06969 HemN C-terminal domain Atep_21480 PF05175 Methyltransferase small domain Atep_21490 PF02082 Transcriptional regulator Atep_21510 PF00085 Thioredoxin Atep_21520 PF05191 Adenylate kinase, active site lid Atep_21530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_21530 PF00183 Hsp90 protein Atep_21540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atep_21540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atep_21540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atep_21540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atep_21550 PF00011 Hsp20/alpha crystallin family Atep_21560 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Atep_21570 PF16653 Saccharopine dehydrogenase C-terminal domain Atep_21570 PF03435 Saccharopine dehydrogenase NADP binding domain Atep_21580 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Atep_21580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Atep_21580 PF01276 Orn/Lys/Arg decarboxylase, major domain Atep_21590 PF03372 Endonuclease/Exonuclease/phosphatase family Atep_21620 PF09115 DNA polymerase III, delta subunit, C terminal Atep_21630 PF02223 Thymidylate kinase Atep_21640 PF02618 YceG-like family Atep_21650 PF00109 Beta-ketoacyl synthase, N-terminal domain Atep_21650 PF02801 Beta-ketoacyl synthase, C-terminal domain Atep_21660 PF00550 Phosphopantetheine attachment site Atep_21680 PF00698 Acyl transferase domain Atep_21690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Atep_21690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Atep_21700 PF02504 Fatty acid synthesis protein Atep_21710 PF01783 Ribosomal L32p protein family Atep_21730 PF00196 Bacterial regulatory proteins, luxR family Atep_21730 PF00072 Response regulator receiver domain Atep_21750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Atep_21770 PF13519 von Willebrand factor type A domain Atep_21770 PF07584 Aerotolerance regulator N-terminal Atep_21840 PF17863 AAA lid domain Atep_21840 PF07726 ATPase family associated with various cellular activities (AAA) Atep_21920 PF04186 FxsA cytoplasmic membrane protein Atep_21930 PF03091 CutA1 divalent ion tolerance protein Atep_21940 PF11412 Disulphide bond corrector protein DsbC Atep_21940 PF02683 Cytochrome C biogenesis protein transmembrane region Atep_21950 PF08534 Redoxin Atep_21960 PF01220 Dehydroquinase class II Atep_21970 PF00364 Biotin-requiring enzyme Atep_21980 PF02785 Biotin carboxylase C-terminal domain Atep_21980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Atep_21980 PF00289 Biotin carboxylase, N-terminal domain Atep_21990 PF17228 Sulphur globule protein Atep_22000 PF00005 ABC transporter Atep_22010 PF01032 FecCD transport family Atep_22030 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Atep_22040 PF00842 Alanine racemase, C-terminal domain Atep_22040 PF01168 Alanine racemase, N-terminal domain Atep_22120 PF01496 V-type ATPase 116kDa subunit family Atep_22150 PF01991 ATP synthase (E/31 kDa) subunit Atep_22160 PF02874 ATP synthase alpha/beta family, beta-barrel domain Atep_22160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atep_22160 PF16886 ATPsynthase alpha/beta subunit N-term extension Atep_22180 PF05016 ParE toxin of type II toxin-antitoxin system, parDE Atep_22200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atep_22220 PF01813 ATP synthase subunit D Atep_22230 PF01590 GAF domain Atep_22230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_22230 PF00512 His Kinase A (phospho-acceptor) domain Atep_22230 PF08446 PAS fold Atep_22230 PF00360 Phytochrome region Atep_22240 PF01126 Heme oxygenase Atep_22260 PF00563 EAL domain Atep_22260 PF00990 Diguanylate cyclase, GGDEF domain Atep_22260 PF08448 PAS fold Atep_22280 PF01235 Sodium:alanine symporter family Atep_22290 PF04279 Intracellular septation protein A Atep_22300 PF03795 YCII-related domain Atep_22330 PF00533 BRCA1 C Terminus (BRCT) domain Atep_22330 PF12826 Helix-hairpin-helix motif Atep_22330 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Atep_22330 PF01653 NAD-dependent DNA ligase adenylation domain Atep_22330 PF03120 NAD-dependent DNA ligase OB-fold domain Atep_22340 PF04354 ZipA, C-terminal FtsZ-binding domain Atep_22350 PF00689 Cation transporting ATPase, C-terminus Atep_22350 PF00690 Cation transporter/ATPase, N-terminus Atep_22370 PF00682 HMGL-like Atep_22390 PF03966 Trm112p-like protein Atep_22400 PF18337 RapA N-terminal Tudor like domain Atep_22400 PF18339 RapA N-terminal Tudor like domain 1 Atep_22400 PF12137 RNA polymerase recycling family C-terminal Atep_22400 PF00176 SNF2 family N-terminal domain Atep_22400 PF00271 Helicase conserved C-terminal domain Atep_22410 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_22410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Atep_22420 PF00462 Glutaredoxin Atep_22420 PF08534 Redoxin Atep_22440 PF00474 Sodium:solute symporter family Atep_22470 PF00374 Nickel-dependent hydrogenase Atep_22500 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Atep_22500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Atep_22520 PF01750 Hydrogenase maturation protease Atep_22540 PF01842 ACT domain Atep_22540 PF08335 GlnD PII-uridylyltransferase Atep_22540 PF01966 HD domain Atep_22540 PF01909 Nucleotidyltransferase domain Atep_22550 PF00557 Metallopeptidase family M24 Atep_22560 PF00318 Ribosomal protein S2 Atep_22570 PF00889 Elongation factor TS Atep_22580 PF00696 Amino acid kinase family Atep_22590 PF01765 Ribosome recycling factor Atep_22600 PF01255 Putative undecaprenyl diphosphate synthase Atep_22620 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Atep_22620 PF13288 DXP reductoisomerase C-terminal domain Atep_22620 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Atep_22650 PF01850 PIN domain Atep_22660 PF13180 PDZ domain Atep_22660 PF02163 Peptidase family M50 Atep_22660 PF17820 PDZ domain Atep_22670 PF01103 Surface antigen Atep_22670 PF07244 Surface antigen variable number repeat Atep_22690 PF00132 Bacterial transferase hexapeptide (six repeats) Atep_22690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Atep_22700 PF07977 FabA-like domain Atep_22710 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Atep_22710 PF00132 Bacterial transferase hexapeptide (six repeats) Atep_22720 PF02684 Lipid-A-disaccharide synthetase Atep_22740 PF01132 Elongation factor P (EF-P) OB domain Atep_22740 PF08207 Elongation factor P (EF-P) KOW-like domain Atep_22740 PF09285 Elongation factor P, C-terminal Atep_22750 PF00152 tRNA synthetases class II (D, K and N) Atep_22760 PF01569 PAP2 superfamily Atep_22770 PF00072 Response regulator receiver domain Atep_22770 PF00486 Transcriptional regulatory protein, C terminal Atep_22780 PF01895 PhoU domain Atep_22790 PF01594 AI-2E family transporter Atep_22820 PF16360 GTP-binding GTPase Middle Region Atep_22820 PF13167 GTP-binding GTPase N-terminal Atep_22820 PF01926 50S ribosome-binding GTPase Atep_22830 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Atep_22830 PF01926 50S ribosome-binding GTPase Atep_22840 PF01351 Ribonuclease HII Atep_22860 PF04055 Radical SAM superfamily Atep_22900 PF01883 Iron-sulfur cluster assembly protein Atep_22900 PF10609 NUBPL iron-transfer P-loop NTPase Atep_22910 PF07282 Putative transposase DNA-binding domain Atep_22910 PF01385 Probable transposase Atep_22910 PF12323 Helix-turn-helix domain Atep_22940 PF00873 AcrB/AcrD/AcrF family Atep_22950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Atep_22950 PF00529 HlyD membrane-fusion protein of T1SS Atep_22990 PF02445 Quinolinate synthetase A protein Atep_23000 PF03264 NapC/NirT cytochrome c family, N-terminal region Atep_23030 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding Atep_23030 PF07992 Pyridine nucleotide-disulphide oxidoreductase Atep_23030 PF10518 TAT (twin-arginine translocation) pathway signal sequence Atep_23050 PF08351 Domain of unknown function (DUF1726) Atep_23050 PF13718 GNAT acetyltransferase 2 Atep_23050 PF17176 tRNA-binding domain Atep_23050 PF05127 Helicase Atep_23090 PF01195 Peptidyl-tRNA hydrolase Atep_23100 PF01386 Ribosomal L25p family Atep_23100 PF14693 Ribosomal protein TL5, C-terminal domain Atep_23110 PF14572 Phosphoribosyl synthetase-associated domain Atep_23110 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Atep_23120 PF08544 GHMP kinases C terminal Atep_23120 PF00288 GHMP kinases N terminal domain Atep_23140 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Atep_23140 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Atep_23140 PF01488 Shikimate / quinate 5-dehydrogenase Atep_23150 PF03462 PCRF domain Atep_23150 PF00472 RF-1 domain Atep_23200 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Atep_23210 PF03707 Bacterial signalling protein N terminal repeat Atep_23210 PF00990 Diguanylate cyclase, GGDEF domain Atep_23210 PF00563 EAL domain Atep_23220 PF00700 Bacterial flagellin C-terminal helical region Atep_23220 PF00669 Bacterial flagellin N-terminal helical region Atep_23230 PF00460 Flagella basal body rod protein Atep_23230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atep_23240 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Atep_23240 PF10135 Rod binding protein Atep_23250 PF02119 Flagellar P-ring protein Atep_23260 PF02107 Flagellar L-ring protein Atep_23270 PF00460 Flagella basal body rod protein Atep_23270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atep_23280 PF00460 Flagella basal body rod protein Atep_23280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atep_23290 PF07559 Flagellar basal body protein FlaE Atep_23290 PF00460 Flagella basal body rod protein Atep_23290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atep_23300 PF13861 FlgD Tudor-like domain Atep_23300 PF13860 FlgD Ig-like domain Atep_23300 PF03963 Flagellar hook capping protein - N-terminal region Atep_23310 PF00460 Flagella basal body rod protein Atep_23310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Atep_23320 PF00460 Flagella basal body rod protein Atep_23330 PF03705 CheR methyltransferase, all-alpha domain Atep_23330 PF01739 CheR methyltransferase, SAM binding domain Atep_23340 PF01584 CheW-like domain Atep_23340 PF00072 Response regulator receiver domain Atep_23400 PF01177 Asp/Glu/Hydantoin racemase Atep_23410 PF18395 Cas3 C-terminal domain Atep_23410 PF18019 HD domain Atep_23420 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) Atep_23440 PF09344 CT1975-like protein Atep_23480 PF01867 CRISPR associated protein Cas1 Atep_23490 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) Atep_23510 PF00196 Bacterial regulatory proteins, luxR family Atep_23510 PF00072 Response regulator receiver domain Atep_23520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_23520 PF00512 His Kinase A (phospho-acceptor) domain Atep_23520 PF00989 PAS fold Atep_23540 PF03739 Lipopolysaccharide export system permease LptF/LptG Atep_23550 PF00883 Cytosol aminopeptidase family, catalytic domain Atep_23550 PF02789 Cytosol aminopeptidase family, N-terminal domain Atep_23560 PF00291 Pyridoxal-phosphate dependent enzyme Atep_23590 PF00005 ABC transporter Atep_23590 PF12848 ABC transporter Atep_23620 PF00364 Biotin-requiring enzyme Atep_23620 PF00561 alpha/beta hydrolase fold Atep_23630 PF00425 chorismate binding enzyme Atep_23640 PF16582 Middle domain of thiamine pyrophosphate Atep_23640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atep_23640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atep_23670 PF01850 PIN domain Atep_23680 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Atep_23690 PF00378 Enoyl-CoA hydratase/isomerase Atep_23700 PF01040 UbiA prenyltransferase family Atep_23710 PF13378 Enolase C-terminal domain-like Atep_23710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Atep_23730 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Atep_23730 PF06165 Glycosyltransferase family 36 Atep_23730 PF10091 Putative glucoamylase Atep_23750 PF06472 ABC transporter transmembrane region 2 Atep_23750 PF00005 ABC transporter Atep_23760 PF00232 Glycosyl hydrolase family 1 Atep_23770 PF00535 Glycosyl transferase family 2 Atep_23790 PF04349 Periplasmic glucan biosynthesis protein, MdoG Atep_23800 PF00691 OmpA family Atep_23800 PF05736 OprF membrane domain Atep_23810 PF07282 Putative transposase DNA-binding domain Atep_23810 PF01385 Probable transposase Atep_23810 PF12323 Helix-turn-helix domain Atep_23820 PF14492 Elongation Factor G, domain II Atep_23820 PF00009 Elongation factor Tu GTP binding domain Atep_23820 PF03764 Elongation factor G, domain IV Atep_23820 PF03144 Elongation factor Tu domain 2 Atep_23820 PF00679 Elongation factor G C-terminus Atep_23860 PF07963 Prokaryotic N-terminal methylation motif Atep_23860 PF00114 Pilin (bacterial filament) Atep_23900 PF05567 Neisseria PilC beta-propeller domain Atep_23910 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor Atep_23910 PF07963 Prokaryotic N-terminal methylation motif Atep_23930 PF09335 SNARE associated Golgi protein Atep_23940 PF00209 Sodium:neurotransmitter symporter family Atep_23950 PF00768 D-alanyl-D-alanine carboxypeptidase Atep_23960 PF00849 RNA pseudouridylate synthase Atep_23960 PF01479 S4 domain Atep_23970 PF04079 Segregation and condensation complex subunit ScpB Atep_23980 PF02616 Segregation and condensation protein ScpA Atep_23990 PF00579 tRNA synthetases class I (W and Y) Atep_24000 PF02163 Peptidase family M50 Atep_24010 PF01300 Telomere recombination Atep_24020 PF02811 PHP domain Atep_24060 PF00300 Histidine phosphatase superfamily (branch 1) Atep_24090 PF01814 Hemerythrin HHE cation binding domain Atep_24100 PF14437 MafB19-like deaminase Atep_24110 PF00117 Glutamine amidotransferase class-I Atep_24110 PF00958 GMP synthase C terminal domain Atep_24110 PF02540 NAD synthase Atep_24120 PF00478 IMP dehydrogenase / GMP reductase domain Atep_24120 PF00571 CBS domain Atep_24130 PF02601 Exonuclease VII, large subunit Atep_24130 PF13742 OB-fold nucleic acid binding domain Atep_24140 PF00005 ABC transporter Atep_24140 PF12848 ABC transporter Atep_24170 PF00343 Carbohydrate phosphorylase Atep_24180 PF02558 Ketopantoate reductase PanE/ApbA Atep_24180 PF08546 Ketopantoate reductase PanE/ApbA C terminal Atep_24210 PF13193 AMP-binding enzyme C-terminal domain Atep_24210 PF00501 AMP-binding enzyme Atep_24210 PF01553 Acyltransferase Atep_24220 PF13439 Glycosyltransferase Family 4 Atep_24220 PF00534 Glycosyl transferases group 1 Atep_24250 PF00535 Glycosyl transferase family 2 Atep_24270 PF13439 Glycosyltransferase Family 4 Atep_24300 PF13439 Glycosyltransferase Family 4 Atep_24400 PF01965 DJ-1/PfpI family Atep_24410 PF01180 Dihydroorotate dehydrogenase Atep_24420 PF00733 Asparagine synthase Atep_24420 PF13537 Glutamine amidotransferase domain Atep_24440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Atep_24440 PF00128 Alpha amylase, catalytic domain Atep_24440 PF02806 Alpha amylase, C-terminal all-beta domain Atep_24450 PF00483 Nucleotidyl transferase Atep_24470 PF05690 Thiazole biosynthesis protein ThiG Atep_24480 PF02390 Putative methyltransferase Atep_24490 PF00005 ABC transporter Atep_24490 PF03459 TOBE domain Atep_24500 PF03649 Uncharacterised protein family (UPF0014) Atep_24510 PF06039 Malate:quinone oxidoreductase (Mqo) Atep_24520 PF03600 Citrate transporter Atep_24550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Atep_24550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Atep_24550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Atep_24550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Atep_24570 PF00425 chorismate binding enzyme Atep_24570 PF04715 Anthranilate synthase component I, N terminal region Atep_24580 PF00672 HAMP domain Atep_24580 PF12729 Four helix bundle sensory module for signal transduction Atep_24580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_24600 PF00072 Response regulator receiver domain Atep_24610 PF00072 Response regulator receiver domain Atep_24610 PF01627 Hpt domain Atep_24610 PF00512 His Kinase A (phospho-acceptor) domain Atep_24610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_24610 PF00672 HAMP domain Atep_24610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_24620 PF00578 AhpC/TSA family Atep_24630 PF05175 Methyltransferase small domain Atep_24640 PF01455 HupF/HypC family Atep_24650 PF01924 Hydrogenase formation hypA family Atep_24660 PF00586 AIR synthase related protein, N-terminal domain Atep_24660 PF02769 AIR synthase related protein, C-terminal domain Atep_24680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atep_24680 PF03466 LysR substrate binding domain Atep_24690 PF00902 Sec-independent protein translocase protein (TatC) Atep_24700 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Atep_24710 PF00977 Histidine biosynthesis protein Atep_24720 PF00475 Imidazoleglycerol-phosphate dehydratase Atep_24730 PF00145 C-5 cytosine-specific DNA methylase Atep_24740 PF02637 GatB domain Atep_24740 PF02934 GatB/GatE catalytic domain Atep_24750 PF01523 Putative modulator of DNA gyrase Atep_24760 PF00795 Carbon-nitrogen hydrolase Atep_24770 PF13502 AsmA-like C-terminal region Atep_24770 PF13116 Protein of unknown function Atep_24780 PF10150 Ribonuclease E/G family Atep_24780 PF00575 S1 RNA binding domain Atep_24790 PF02545 Maf-like protein Atep_24800 PF02590 Predicted SPOUT methyltransferase Atep_24810 PF02416 mttA/Hcf106 family Atep_24820 PF02416 mttA/Hcf106 family Atep_24840 PF00873 AcrB/AcrD/AcrF family Atep_24850 PF09924 Uncharacterised conserved protein (DUF2156) Atep_24850 PF03706 Lysylphosphatidylglycerol synthase TM region Atep_24890 PF00270 DEAD/DEAH box helicase Atep_24890 PF00271 Helicase conserved C-terminal domain Atep_24890 PF17191 RecG wedge domain Atep_24900 PF13406 Transglycosylase SLT domain Atep_24910 PF01042 Endoribonuclease L-PSP Atep_24920 PF01259 SAICAR synthetase Atep_24930 PF01740 STAS domain Atep_24930 PF00916 Sulfate permease family Atep_24940 PF00483 Nucleotidyl transferase Atep_24960 PF04055 Radical SAM superfamily Atep_24970 PF00293 NUDIX domain Atep_24980 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Atep_24990 PF01894 Uncharacterised protein family UPF0047 Atep_25000 PF00556 Antenna complex alpha/beta subunit Atep_25010 PF00556 Antenna complex alpha/beta subunit Atep_25020 PF00556 Antenna complex alpha/beta subunit Atep_25030 PF00556 Antenna complex alpha/beta subunit Atep_25040 PF02276 Photosynthetic reaction centre cytochrome C subunit Atep_25050 PF00124 Photosynthetic reaction centre protein Atep_25060 PF00124 Photosynthetic reaction centre protein Atep_25070 PF00556 Antenna complex alpha/beta subunit Atep_25080 PF00556 Antenna complex alpha/beta subunit Atep_25090 PF08369 Proto-chlorophyllide reductase 57 kD subunit Atep_25090 PF00148 Nitrogenase component 1 type Oxidoreductase Atep_25140 PF00148 Nitrogenase component 1 type Oxidoreductase Atep_25150 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Atep_25170 PF00891 O-methyltransferase domain Atep_25170 PF16864 Dimerisation domain Atep_25180 PF00348 Polyprenyl synthetase Atep_25190 PF01593 Flavin containing amine oxidoreductase Atep_25230 PF01593 Flavin containing amine oxidoreductase Atep_25240 PF12697 Alpha/beta hydrolase family Atep_25250 PF00140 Sigma-70 factor, region 1.2 Atep_25250 PF04542 Sigma-70 region 2 Atep_25250 PF04545 Sigma-70, region 4 Atep_25260 PF02600 Disulfide bond formation protein DsbB Atep_25270 PF01323 DSBA-like thioredoxin domain Atep_25270 PF00085 Thioredoxin Atep_25280 PF03209 PUCC protein Atep_25290 PF00556 Antenna complex alpha/beta subunit Atep_25300 PF00556 Antenna complex alpha/beta subunit Atep_25320 PF00556 Antenna complex alpha/beta subunit Atep_25330 PF00556 Antenna complex alpha/beta subunit Atep_25340 PF00556 Antenna complex alpha/beta subunit Atep_25360 PF00556 Antenna complex alpha/beta subunit Atep_25380 PF00486 Transcriptional regulatory protein, C terminal Atep_25380 PF00072 Response regulator receiver domain Atep_25400 PF15608 PELOTA RNA binding domain Atep_25400 PF11202 Phosphoribosyl transferase (PRTase) Atep_25430 PF18273 Type III R-M EcoP15I C-terminal domain Atep_25430 PF01555 DNA methylase Atep_25460 PF02342 TerD domain Atep_25470 PF02342 TerD domain Atep_25500 PF02342 TerD domain Atep_25520 PF02342 TerD domain Atep_25530 PF07669 Eco57I restriction-modification methylase Atep_25530 PF12950 TaqI-like C-terminal specificity domain Atep_25540 PF07669 Eco57I restriction-modification methylase Atep_25540 PF12950 TaqI-like C-terminal specificity domain Atep_25550 PF05685 Putative restriction endonuclease Atep_25560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Atep_25560 PF14824 Sirohaem biosynthesis protein central Atep_25560 PF10414 Sirohaem synthase dimerisation region Atep_25570 PF00581 Rhodanese-like domain Atep_25580 PF01206 Sulfurtransferase TusA Atep_25590 PF13686 DsrE/DsrF/DrsH-like family Atep_25600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atep_25600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atep_25600 PF00205 Thiamine pyrophosphate enzyme, central domain Atep_25610 PF01590 GAF domain Atep_25610 PF00512 His Kinase A (phospho-acceptor) domain Atep_25610 PF08446 PAS fold Atep_25610 PF00360 Phytochrome region Atep_25610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_25620 PF00072 Response regulator receiver domain Atep_25630 PF00512 His Kinase A (phospho-acceptor) domain Atep_25630 PF09308 LuxQ, periplasmic Atep_25630 PF00072 Response regulator receiver domain Atep_25630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_25640 PF01274 Malate synthase Atep_25670 PF08323 Starch synthase catalytic domain Atep_25670 PF00534 Glycosyl transferases group 1 Atep_25710 PF01734 Patatin-like phospholipase Atep_25720 PF05977 Transmembrane secretion effector Atep_25740 PF11842 Domain of unknown function (DUF3362) Atep_25740 PF04055 Radical SAM superfamily Atep_25740 PF08497 Radical SAM N-terminal Atep_25750 PF01618 MotA/TolQ/ExbB proton channel family Atep_25760 PF13677 Membrane MotB of proton-channel complex MotA/MotB Atep_25760 PF00691 OmpA family Atep_25780 PF00873 AcrB/AcrD/AcrF family Atep_25790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Atep_25790 PF00529 HlyD membrane-fusion protein of T1SS Atep_25840 PF01189 16S rRNA methyltransferase RsmB/F Atep_25840 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Atep_25840 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Atep_25850 PF04555 Restriction endonuclease XhoI Atep_25860 PF07669 Eco57I restriction-modification methylase Atep_25860 PF12950 TaqI-like C-terminal specificity domain Atep_25870 PF08443 RimK-like ATP-grasp domain Atep_25870 PF18030 RimK PreATP-grasp domain Atep_25870 PF02080 TrkA-C domain Atep_25890 PF01546 Peptidase family M20/M25/M40 Atep_25890 PF07687 Peptidase dimerisation domain Atep_25900 PF00155 Aminotransferase class I and II Atep_25910 PF00815 Histidinol dehydrogenase Atep_25920 PF01634 ATP phosphoribosyltransferase Atep_25930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Atep_25960 PF02470 MlaD protein Atep_25970 PF02405 Permease MlaE Atep_25980 PF00005 ABC transporter Atep_25990 PF01380 SIS domain Atep_25990 PF00571 CBS domain Atep_26020 PF03968 OstA-like protein Atep_26020 PF04453 LPS transport system D Atep_26030 PF00005 ABC transporter Atep_26030 PF12399 Branched-chain amino acid ATP-binding cassette transporter Atep_26040 PF00309 Sigma-54 factor, Activator interacting domain (AID) Atep_26040 PF04963 Sigma-54 factor, core binding domain Atep_26040 PF04552 Sigma-54, DNA binding domain Atep_26050 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Atep_26060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Atep_26070 PF02603 HPr Serine kinase N terminus Atep_26070 PF07475 HPr Serine kinase C-terminal domain Atep_26080 PF03668 P-loop ATPase protein family Atep_26100 PF00381 PTS HPr component phosphorylation site Atep_26110 PF02896 PEP-utilising enzyme, TIM barrel domain Atep_26110 PF00391 PEP-utilising enzyme, mobile domain Atep_26110 PF05524 PEP-utilising enzyme, N-terminal Atep_26120 PF01425 Amidase Atep_26130 PF02686 Glu-tRNAGln amidotransferase C subunit Atep_26160 PF04085 rod shape-determining protein MreC Atep_26170 PF04093 rod shape-determining protein MreD Atep_26180 PF00905 Penicillin binding protein transpeptidase domain Atep_26180 PF03717 Penicillin-binding Protein dimerisation domain Atep_26190 PF01098 Cell cycle protein Atep_26200 PF03330 Lytic transglycolase Atep_26200 PF05036 Sporulation related domain Atep_26210 PF07943 Penicillin-binding protein 5, C-terminal domain Atep_26210 PF00768 D-alanyl-D-alanine carboxypeptidase Atep_26220 PF01063 Amino-transferase class IV Atep_26240 PF03099 Biotin/lipoate A/B protein ligase family Atep_26280 PF00989 PAS fold Atep_26300 PF00990 Diguanylate cyclase, GGDEF domain Atep_26300 PF01590 GAF domain Atep_26300 PF00563 EAL domain Atep_26300 PF00360 Phytochrome region Atep_26310 PF02630 SCO1/SenC Atep_26320 PF04314 Copper chaperone PCu(A)C Atep_26330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Atep_26350 PF03707 Bacterial signalling protein N terminal repeat Atep_26350 PF00990 Diguanylate cyclase, GGDEF domain Atep_26350 PF00563 EAL domain Atep_26360 PF08448 PAS fold Atep_26360 PF01739 CheR methyltransferase, SAM binding domain Atep_26360 PF03705 CheR methyltransferase, all-alpha domain Atep_26360 PF01339 CheB methylesterase Atep_26380 PF00037 4Fe-4S binding domain Atep_26390 PF01467 Cytidylyltransferase-like Atep_26420 PF00675 Insulinase (Peptidase family M16) Atep_26420 PF05193 Peptidase M16 inactive domain Atep_26460 PF01545 Cation efflux family Atep_26460 PF16916 Dimerisation domain of Zinc Transporter Atep_26470 PF03951 Glutamine synthetase, beta-Grasp domain Atep_26470 PF00120 Glutamine synthetase, catalytic domain Atep_26490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_26490 PF00512 His Kinase A (phospho-acceptor) domain Atep_26490 PF00989 PAS fold Atep_26500 PF02954 Bacterial regulatory protein, Fis family Atep_26500 PF00072 Response regulator receiver domain Atep_26500 PF00158 Sigma-54 interaction domain Atep_26540 PF00696 Amino acid kinase family Atep_26600 PF13847 Methyltransferase domain Atep_26600 PF10119 Predicted methyltransferase regulatory domain Atep_26710 PF13439 Glycosyltransferase Family 4 Atep_26710 PF00534 Glycosyl transferases group 1 Atep_26740 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Atep_26750 PF00005 ABC transporter Atep_26810 PF00188 Cysteine-rich secretory protein family Atep_26820 PF04151 Bacterial pre-peptidase C-terminal domain Atep_26820 PF00082 Subtilase family Atep_26830 PF13537 Glutamine amidotransferase domain Atep_26830 PF00733 Asparagine synthase Atep_26840 PF00535 Glycosyl transferase family 2 Atep_26870 PF00529 HlyD membrane-fusion protein of T1SS Atep_26870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Atep_26880 PF00005 ABC transporter Atep_26880 PF00664 ABC transporter transmembrane region Atep_26900 PF16363 GDP-mannose 4,6 dehydratase Atep_26910 PF00483 Nucleotidyl transferase Atep_26920 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Atep_26930 PF04321 RmlD substrate binding domain Atep_26940 PF03544 Gram-negative bacterial TonB protein C-terminal Atep_26950 PF02472 Biopolymer transport protein ExbD/TolR Atep_26960 PF02472 Biopolymer transport protein ExbD/TolR Atep_26970 PF01618 MotA/TolQ/ExbB proton channel family Atep_27000 PF01032 FecCD transport family Atep_27010 PF00005 ABC transporter Atep_27040 PF12419 SNF2 Helicase protein Atep_27040 PF00271 Helicase conserved C-terminal domain Atep_27040 PF00176 SNF2 family N-terminal domain Atep_27050 PF00342 Phosphoglucose isomerase Atep_27060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Atep_27060 PF03466 LysR substrate binding domain Atep_27100 PF00936 BMC domain Atep_27110 PF00936 BMC domain Atep_27160 PF00101 Ribulose bisphosphate carboxylase, small chain Atep_27170 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Atep_27170 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Atep_27190 PF01740 STAS domain Atep_27190 PF00916 Sulfate permease family Atep_27220 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Atep_27220 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Atep_27230 PF00534 Glycosyl transferases group 1 Atep_27230 PF08323 Starch synthase catalytic domain Atep_27240 PF02261 Aspartate decarboxylase Atep_27250 PF02569 Pantoate-beta-alanine ligase Atep_27260 PF02548 Ketopantoate hydroxymethyltransferase Atep_27270 PF01743 Poly A polymerase head domain Atep_27270 PF12627 Probable RNA and SrmB- binding site of polymerase A Atep_27270 PF12626 Polymerase A arginine-rich C-terminus Atep_27280 PF13237 4Fe-4S dicluster domain Atep_27290 PF00148 Nitrogenase component 1 type Oxidoreductase Atep_27300 PF00148 Nitrogenase component 1 type Oxidoreductase Atep_27310 PF00795 Carbon-nitrogen hydrolase Atep_27320 PF00929 Exonuclease Atep_27340 PF00005 ABC transporter Atep_27340 PF03459 TOBE domain Atep_27350 PF04002 RadC-like JAB domain Atep_27360 PF04127 DNA / pantothenate metabolism flavoprotein Atep_27360 PF02441 Flavoprotein Atep_27370 PF00692 dUTPase Atep_27390 PF02091 Glycyl-tRNA synthetase alpha subunit Atep_27400 PF02092 Glycyl-tRNA synthetase beta subunit Atep_27400 PF05746 DALR anticodon binding domain Atep_27440 PF00204 DNA gyrase B Atep_27440 PF00986 DNA gyrase B subunit, carboxyl terminus Atep_27440 PF18053 DNA gyrase B subunit insert domain Atep_27440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_27440 PF01751 Toprim domain Atep_27480 PF05235 CHAD domain Atep_27480 PF01928 CYTH domain Atep_27490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_27490 PF00672 HAMP domain Atep_27500 PF07690 Major Facilitator Superfamily Atep_27510 PF00436 Single-strand binding protein family Atep_27520 PF17191 RecG wedge domain Atep_27520 PF00270 DEAD/DEAH box helicase Atep_27520 PF13749 Putative ATP-dependent DNA helicase recG C-terminal Atep_27530 PF03144 Elongation factor Tu domain 2 Atep_27530 PF00679 Elongation factor G C-terminus Atep_27530 PF03764 Elongation factor G, domain IV Atep_27530 PF00009 Elongation factor Tu GTP binding domain Atep_27530 PF14492 Elongation Factor G, domain II Atep_27540 PF17969 L,D-transpeptidase C-terminal domain Atep_27540 PF01476 LysM domain Atep_27540 PF03734 L,D-transpeptidase catalytic domain Atep_27570 PF01061 ABC-2 type transporter Atep_27580 PF00005 ABC transporter Atep_27600 PF03109 ABC1 family Atep_27620 PF01209 ubiE/COQ5 methyltransferase family Atep_27640 PF07724 AAA domain (Cdc48 subfamily) Atep_27640 PF00004 ATPase family associated with various cellular activities (AAA) Atep_27640 PF10431 C-terminal, D2-small domain, of ClpB protein Atep_27650 PF00227 Proteasome subunit Atep_27670 PF13291 ACT domain Atep_27670 PF04607 Region found in RelA / SpoT proteins Atep_27670 PF02824 TGS domain Atep_27680 PF01192 RNA polymerase Rpb6 Atep_27690 PF00625 Guanylate kinase Atep_27700 PF08340 Domain of unknown function (DUF1732) Atep_27700 PF03755 YicC-like family, N-terminal region Atep_27710 PF00069 Protein kinase domain Atep_27720 PF00311 Phosphoenolpyruvate carboxylase Atep_27780 PF13439 Glycosyltransferase Family 4 Atep_27780 PF00534 Glycosyl transferases group 1 Atep_27800 PF17946 RecC C-terminal domain Atep_27810 PF03050 Transposase IS66 family Atep_27830 PF00149 Calcineurin-like phosphoesterase Atep_27840 PF00872 Transposase, Mutator family Atep_27850 PF00872 Transposase, Mutator family Atep_27860 PF18273 Type III R-M EcoP15I C-terminal domain Atep_27860 PF01555 DNA methylase Atep_27880 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Atep_27890 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Atep_27910 PF00994 Probable molybdopterin binding domain Atep_27910 PF18146 Damage-inducible protein CinA KH domain Atep_27910 PF02464 Competence-damaged protein Atep_27930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Atep_27940 PF00873 AcrB/AcrD/AcrF family Atep_27970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Atep_27980 PF00072 Response regulator receiver domain Atep_27980 PF01627 Hpt domain Atep_27980 PF00512 His Kinase A (phospho-acceptor) domain Atep_27980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_27980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_27980 PF00672 HAMP domain Atep_27990 PF01180 Dihydroorotate dehydrogenase Atep_28000 PF10371 Domain of unknown function Atep_28000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atep_28000 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Atep_28000 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Atep_28000 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Atep_28010 PF00583 Acetyltransferase (GNAT) family Atep_28020 PF04715 Anthranilate synthase component I, N terminal region Atep_28020 PF00425 chorismate binding enzyme Atep_28030 PF13419 Haloacid dehalogenase-like hydrolase Atep_28040 PF00834 Ribulose-phosphate 3 epimerase family Atep_28050 PF00248 Aldo/keto reductase family Atep_28060 PF03330 Lytic transglycolase Atep_28060 PF05036 Sporulation related domain Atep_28070 PF07238 PilZ domain Atep_28070 PF03170 Bacterial cellulose synthase subunit Atep_28070 PF03552 Cellulose synthase Atep_28070 PF00535 Glycosyl transferase family 2 Atep_28100 PF13180 PDZ domain Atep_28110 PF00486 Transcriptional regulatory protein, C terminal Atep_28110 PF00072 Response regulator receiver domain Atep_28120 PF16527 Two-component sensor protein CpxA, periplasmic domain Atep_28120 PF00512 His Kinase A (phospho-acceptor) domain Atep_28120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_28120 PF00672 HAMP domain Atep_28130 PF01734 Patatin-like phospholipase Atep_28140 PF07075 Protein of unknown function (DUF1343) Atep_28150 PF02547 Queuosine biosynthesis protein Atep_28170 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Atep_28190 PF02237 Biotin protein ligase C terminal domain Atep_28190 PF03099 Biotin/lipoate A/B protein ligase family Atep_28200 PF03309 Type III pantothenate kinase Atep_28230 PF03334 Na+/H+ antiporter subunit Atep_28240 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Atep_28250 PF01899 Na+/H+ ion antiporter subunit Atep_28260 PF00361 Proton-conducting membrane transporter Atep_28270 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Atep_28280 PF13244 Domain of unknown function (DUF4040) Atep_28280 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Atep_28280 PF00361 Proton-conducting membrane transporter Atep_28280 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Atep_28300 PF07670 Nucleoside recognition Atep_28300 PF02421 Ferrous iron transport protein B Atep_28300 PF07664 Ferrous iron transport protein B C terminus Atep_28300 PF17910 FeoB cytosolic helical domain Atep_28310 PF04023 FeoA domain Atep_28330 PF11756 Nitrous oxide-stimulated promoter Atep_28360 PF00027 Cyclic nucleotide-binding domain Atep_28360 PF13545 Crp-like helix-turn-helix domain Atep_28380 PF00085 Thioredoxin Atep_28390 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Atep_28400 PF01322 Cytochrome C' Atep_28420 PF06508 Queuosine biosynthesis protein QueC Atep_28430 PF01242 6-pyruvoyl tetrahydropterin synthase Atep_28450 PF00556 Antenna complex alpha/beta subunit Atep_28460 PF00556 Antenna complex alpha/beta subunit Atep_28500 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) Atep_28510 PF00448 SRP54-type protein, GTPase domain Atep_28510 PF02881 SRP54-type protein, helical bundle domain Atep_28520 PF00005 ABC transporter Atep_28530 PF18075 FtsX extracellular domain Atep_28550 PF02594 Uncharacterised ACR, YggU family COG1872 Atep_28560 PF02325 YGGT family Atep_28570 PF14748 Pyrroline-5-carboxylate reductase dimerisation Atep_28570 PF03807 NADP oxidoreductase coenzyme F420-dependent Atep_28580 PF01168 Alanine racemase, N-terminal domain Atep_28590 PF01725 Ham1 family Atep_28600 PF01138 3' exoribonuclease family, domain 1 Atep_28600 PF03725 3' exoribonuclease family, domain 2 Atep_28610 PF13609 Gram-negative porin Atep_28620 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Atep_28630 PF01812 5-formyltetrahydrofolate cyclo-ligase family Atep_28640 PF05164 Cell division protein ZapA Atep_28660 PF03695 Uncharacterised protein family (UPF0149) Atep_28670 PF00557 Metallopeptidase family M24 Atep_28670 PF05195 Aminopeptidase P, N-terminal domain Atep_28680 PF01494 FAD binding domain Atep_28690 PF01494 FAD binding domain Atep_28700 PF00365 Phosphofructokinase Atep_28710 PF00719 Inorganic pyrophosphatase Atep_28720 PF01967 MoaC family Atep_28730 PF01926 50S ribosome-binding GTPase Atep_28740 PF00512 His Kinase A (phospho-acceptor) domain Atep_28740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_28740 PF13493 Domain of unknown function (DUF4118) Atep_28740 PF08447 PAS fold Atep_28740 PF13426 PAS domain Atep_28740 PF00989 PAS fold Atep_28750 PF13439 Glycosyltransferase Family 4 Atep_28750 PF00534 Glycosyl transferases group 1 Atep_28760 PF00535 Glycosyl transferase family 2 Atep_28790 PF01584 CheW-like domain Atep_28800 PF13677 Membrane MotB of proton-channel complex MotA/MotB Atep_28800 PF00691 OmpA family Atep_28810 PF01618 MotA/TolQ/ExbB proton channel family Atep_28820 PF00072 Response regulator receiver domain Atep_28820 PF01339 CheB methylesterase Atep_28830 PF00072 Response regulator receiver domain Atep_28830 PF02895 Signal transducing histidine kinase, homodimeric domain Atep_28830 PF01627 Hpt domain Atep_28830 PF01584 CheW-like domain Atep_28830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_28840 PF04344 Chemotaxis phosphatase, CheZ Atep_28850 PF00072 Response regulator receiver domain Atep_28860 PF04542 Sigma-70 region 2 Atep_28860 PF04539 Sigma-70 region 3 Atep_28860 PF04545 Sigma-70, region 4 Atep_28870 PF10609 NUBPL iron-transfer P-loop NTPase Atep_28880 PF00448 SRP54-type protein, GTPase domain Atep_28890 PF00771 FHIPEP family Atep_28900 PF01312 FlhB HrpN YscU SpaS Family Atep_28910 PF01311 Bacterial export proteins, family 1 Atep_28920 PF01313 Bacterial export proteins, family 3 Atep_28930 PF00813 FliP family Atep_28940 PF04347 Flagellar biosynthesis protein, FliO Atep_28950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Atep_28960 PF02154 Flagellar motor switch protein FliM Atep_28960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Atep_29000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Atep_29000 PF18269 T3SS EscN ATPase C-terminal domain Atep_29020 PF01706 FliG C-terminal domain Atep_29020 PF14842 FliG N-terminal domain Atep_29020 PF14841 FliG middle domain Atep_29030 PF01514 Secretory protein of YscJ/FliF family Atep_29030 PF08345 Flagellar M-ring protein C-terminal Atep_29040 PF02049 Flagellar hook-basal body complex protein FliE Atep_29050 PF06490 Flagellar regulatory protein FleQ Atep_29050 PF02954 Bacterial regulatory protein, Fis family Atep_29050 PF00158 Sigma-54 interaction domain Atep_29080 PF01618 MotA/TolQ/ExbB proton channel family Atep_29090 PF13677 Membrane MotB of proton-channel complex MotA/MotB Atep_29090 PF00691 OmpA family Atep_29110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Atep_29110 PF00205 Thiamine pyrophosphate enzyme, central domain Atep_29110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Atep_29120 PF10369 Small subunit of acetolactate synthase Atep_29130 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Atep_29130 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Atep_29160 PF03061 Thioesterase superfamily Atep_29170 PF01618 MotA/TolQ/ExbB proton channel family Atep_29180 PF02472 Biopolymer transport protein ExbD/TolR Atep_29200 PF04052 TolB amino-terminal domain Atep_29200 PF07676 WD40-like Beta Propeller Repeat Atep_29210 PF00691 OmpA family Atep_29230 PF11871 Domain of unknown function (DUF3391) Atep_29230 PF01966 HD domain Atep_29240 PF00990 Diguanylate cyclase, GGDEF domain Atep_29240 PF03707 Bacterial signalling protein N terminal repeat Atep_29240 PF00563 EAL domain Atep_29250 PF01722 BolA-like protein Atep_29280 PF01614 Bacterial transcriptional regulator Atep_29280 PF09339 IclR helix-turn-helix domain Atep_29310 PF00005 ABC transporter Atep_29330 PF09820 Predicted AAA-ATPase Atep_29330 PF08011 PD-(D/E)XK nuclease superfamily Atep_29340 PF09820 Predicted AAA-ATPase Atep_29340 PF08011 PD-(D/E)XK nuclease superfamily Atep_29350 PF00689 Cation transporting ATPase, C-terminus Atep_29350 PF00690 Cation transporter/ATPase, N-terminus Atep_29360 PF05362 Lon protease (S16) C-terminal proteolytic domain Atep_29360 PF00004 ATPase family associated with various cellular activities (AAA) Atep_29360 PF02190 ATP-dependent protease La (LON) substrate-binding domain Atep_29380 PF00990 Diguanylate cyclase, GGDEF domain Atep_29390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Atep_29400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Atep_29400 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Atep_29400 PF00672 HAMP domain Atep_29400 PF00512 His Kinase A (phospho-acceptor) domain Atep_29400 PF01627 Hpt domain Atep_29400 PF00072 Response regulator receiver domain Atep_29430 PF00005 ABC transporter Atep_29450 PF00107 Zinc-binding dehydrogenase Atep_29450 PF08240 Alcohol dehydrogenase GroES-like domain Atep_29460 PF05683 Fumarase C-terminus Atep_29460 PF05681 Fumarate hydratase (Fumerase) Atep_29470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Atep_29470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Atep_29470 PF03129 Anticodon binding domain Atep_29470 PF02824 TGS domain Atep_29480 PF05198 Translation initiation factor IF-3, N-terminal domain Atep_29480 PF00707 Translation initiation factor IF-3, C-terminal domain Atep_29490 PF01632 Ribosomal protein L35 Atep_29500 PF00453 Ribosomal protein L20 Atep_29510 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Atep_29510 PF01409 tRNA synthetases class II core domain (F) Atep_29520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Atep_29520 PF03483 B3/4 domain Atep_29520 PF03484 tRNA synthetase B5 domain Atep_29520 PF03147 Ferredoxin-fold anticodon binding domain Atep_29520 PF01588 Putative tRNA binding domain Atep_29530 PF00216 Bacterial DNA-binding protein Atep_29540 PF13411 MerR HTH family regulatory protein Atep_29590 PF01867 CRISPR associated protein Cas1 Atep_29670 PF07282 Putative transposase DNA-binding domain Atep_29670 PF01385 Probable transposase Atep_29670 PF12323 Helix-turn-helix domain Atep_29740 PF02463 RecF/RecN/SMC N terminal domain Atep_29740 PF06470 SMC proteins Flexible Hinge Domain Atep_29770 PF03050 Transposase IS66 family Atep_29780 PF00350 Dynamin family Atep_29800 PF01926 50S ribosome-binding GTPase Atep_29800 PF12631 MnmE helical domain Atep_29800 PF10396 GTP-binding protein TrmE N-terminus Atep_29860 PF03050 Transposase IS66 family Atep_29890 PF10396 GTP-binding protein TrmE N-terminus Atep_29890 PF12631 MnmE helical domain Atep_29890 PF01926 50S ribosome-binding GTPase Atep_29900 PF14849 YidC periplasmic domain Atep_29900 PF02096 60Kd inner membrane protein Atep_29910 PF01809 Putative membrane protein insertion efficiency factor Atep_29920 PF00825 Ribonuclease P Atep_29930 PF00468 Ribosomal protein L34 Atep_30030 PF01385 Probable transposase Atep_30030 PF12323 Helix-turn-helix domain Atep_30030 PF07282 Putative transposase DNA-binding domain Atep_30140 PF01131 DNA topoisomerase Atep_30140 PF01751 Toprim domain Atep_30200 PF01343 Peptidase family S49 Atep_30200 PF06965 Na+/H+ antiporter 1 Atep_30210 PF00816 H-NS histone family Atep_30230 PF07804 HipA-like C-terminal domain Atep_30240 PF11740 Plasmid replication region DNA-binding N-term Atep_30310 PF03747 ADP-ribosylglycohydrolase Atep_30340 PF03050 Transposase IS66 family Atep_30360 PF07042 TrfA protein Atep_30380 PF13614 AAA domain Atep_30380 PF00376 MerR family regulatory protein Atep_30390 PF04352 ProQ/FINO family Atep_30390 PF17516 ProQ C-terminal domain Atep_30430 PF11455 Protein of unknown function (DUF3018) Atep_30440 PF17782 DprA winged helix domain Atep_30440 PF02481 DNA recombination-mediator protein A Atep_30450 PF01051 Initiator Replication protein Atep_30620 PF07282 Putative transposase DNA-binding domain Atep_30620 PF01385 Probable transposase Atep_30620 PF12323 Helix-turn-helix domain Atep_30700 PF01867 CRISPR associated protein Cas1 Atep_30740 PF10138 vWA found in TerF C terminus Atep_30780 PF07042 TrfA protein Atep_30800 PF03050 Transposase IS66 family Atep_30840 PF17762 HTH domain found in ParB protein Atep_30840 PF02195 ParB-like nuclease domain Atep_30930 PF01555 DNA methylase Atep_31010 PF12323 Helix-turn-helix domain Atep_31010 PF01385 Probable transposase Atep_31010 PF07282 Putative transposase DNA-binding domain Atep_31080 PF03743 Bacterial conjugation TrbI-like protein Atep_31140 PF10502 Signal peptidase, peptidase S26 Atep_31210 PF06122 Conjugative relaxosome accessory transposon protein Atep_31340 PF00437 Type II/IV secretion system protein Atep_31370 PF01551 Peptidase family M23 Atep_31370 PF10145 Phage-related minor tail protein Atep_31370 PF01464 Transglycosylase SLT domain Atep_31400 PF00580 UvrD/REP helicase N-terminal domain Atep_31400 PF13361 UvrD-like helicase C-terminal domain Atep_31420 PF00149 Calcineurin-like phosphoesterase Atep_31460 PF02086 D12 class N6 adenine-specific DNA methyltransferase Atep_31590 PF09615 CRISPR-associated protein (Cas_Csy3) Atep_31620 PF01867 CRISPR associated protein Cas1