Alvin_0001 SM00382 ATPases associated with a variety of cellular activities Alvin_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Alvin_0002 SM00480 DNA polymerase III beta subunit Alvin_0008 SM00382 ATPases associated with a variety of cellular activities Alvin_0011 SM00448 cheY-homologous receiver domain Alvin_0011 SM00862 Transcriptional regulatory protein, C terminal Alvin_0012 SM00387 Histidine kinase-like ATPases Alvin_0025 SM00448 cheY-homologous receiver domain Alvin_0025 SM00862 Transcriptional regulatory protein, C terminal Alvin_0026 SM00387 Histidine kinase-like ATPases Alvin_0031 SM00305 Hint (Hedgehog/Intein) domain C-terminal region Alvin_0031 SM00306 Hint (Hedgehog/Intein) domain N-terminal region Alvin_0031 SM00387 Histidine kinase-like ATPases Alvin_0031 SM00433 TopoisomeraseII Alvin_0031 SM00530 Helix-turn-helix XRE-family like proteins Alvin_0038 SM00470 ParB-like nuclease domain Alvin_0046 SM00382 ATPases associated with a variety of cellular activities Alvin_0059 SM00052 Putative diguanylate phosphodiesterase Alvin_0059 SM00267 diguanylate cyclase Alvin_0059 SM00448 cheY-homologous receiver domain Alvin_0066 SM00822 Alvin_0066 Alvin_0085 SM00382 ATPases associated with a variety of cellular activities Alvin_0098 SM00345 helix_turn_helix gluconate operon transcriptional repressor Alvin_0098 SM00895 Alvin_0098 Alvin_0109 SM00859 Semialdehyde dehydrogenase, NAD binding domain Alvin_0112 SM00363 S4 RNA-binding domain Alvin_0113 SM00014 Acid phosphatase homologues Alvin_0115 SM00563 Phosphate acyltransferases Alvin_0119 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_0121 SM00749 bacterial OsmY and nodulation domain Alvin_0138 SM00842 Cell division protein FtsA Alvin_0139 SM00864 Tubulin/FtsZ family, GTPase domain Alvin_0139 SM00865 Tubulin/FtsZ family, C-terminal domain Alvin_0143 SM00957 SecA DEAD-like domain Alvin_0143 SM00958 SecA preprotein cross-linking domain Alvin_0155 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Alvin_0156 SM00091 PAS domain Alvin_0156 SM00267 diguanylate cyclase Alvin_0166 SM00479 Alvin_0166 Alvin_0167 SM00116 Domain in cystathionine beta-synthase and other proteins. Alvin_0171 SM00100 Cyclic nucleotide-monophosphate binding domain Alvin_0171 SM00419 helix_turn_helix, cAMP Regulatory protein Alvin_0179 SM00487 DEAD-like helicases superfamily Alvin_0180 SM00974 Alvin_0180 Alvin_0183 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_0183 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_0183 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0192 SM00073 Histidine Phosphotransfer domain Alvin_0192 SM00260 Two component signalling adaptor domain Alvin_0192 SM00387 Histidine kinase-like ATPases Alvin_0192 SM00448 cheY-homologous receiver domain Alvin_0192 SM01231 Alvin_0192 Alvin_0193 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_0194 SM00260 Two component signalling adaptor domain Alvin_0195 SM00448 cheY-homologous receiver domain Alvin_0196 SM00448 cheY-homologous receiver domain Alvin_0201 SM00732 Likely ribonuclease with RNase H fold. Alvin_0209 SM00382 ATPases associated with a variety of cellular activities Alvin_0232 SM00736 Dystroglycan-type cadherin-like domains. Alvin_0234 SM00448 cheY-homologous receiver domain Alvin_0234 SM00862 Transcriptional regulatory protein, C terminal Alvin_0235 SM00387 Histidine kinase-like ATPases Alvin_0235 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0236 SM00382 ATPases associated with a variety of cellular activities Alvin_0242 SM00073 Histidine Phosphotransfer domain Alvin_0242 SM00091 PAS domain Alvin_0242 SM00387 Histidine kinase-like ATPases Alvin_0242 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0242 SM00448 cheY-homologous receiver domain Alvin_0243 SM00947 Carbonic anhydrase Alvin_0245 SM00642 Alpha-amylase domain Alvin_0249 SM00966 SpoVT / AbrB like domain Alvin_0254 SM00852 Probable molybdopterin binding domain Alvin_0258 SM00450 Rhodanese Homology Domain Alvin_0261 SM00448 cheY-homologous receiver domain Alvin_0264 SM00890 Domain of unknown function Alvin_0277 SM00448 cheY-homologous receiver domain Alvin_0277 SM00862 Transcriptional regulatory protein, C terminal Alvin_0278 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0278 SM00387 Histidine kinase-like ATPases Alvin_0278 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0283 SM00360 RNA recognition motif Alvin_0284 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Alvin_0293 SM00861 Transketolase, pyrimidine binding domain Alvin_0303 SM00360 RNA recognition motif Alvin_0307 SM00460 Transglutaminase/protease-like homologues Alvin_0308 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_0308 SM00091 PAS domain Alvin_0308 SM00267 diguanylate cyclase Alvin_0309 SM00052 Putative diguanylate phosphodiesterase Alvin_0309 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_0309 SM00091 PAS domain Alvin_0309 SM00267 diguanylate cyclase Alvin_0309 SM00448 cheY-homologous receiver domain Alvin_0310 SM00448 cheY-homologous receiver domain Alvin_0311 SM00387 Histidine kinase-like ATPases Alvin_0311 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0311 SM01079 Alvin_0311 Alvin_0315 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Alvin_0316 SM00861 Transketolase, pyrimidine binding domain Alvin_0320 SM00996 S-adenosyl-L-homocysteine hydrolase Alvin_0320 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Alvin_0349 SM00644 Alvin_0349 Alvin_0352 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_0352 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0353 SM00271 DnaJ molecular chaperone homology domain Alvin_0356 SM00917 LeuA allosteric (dimerisation) domain Alvin_0357 SM00986 Uracil DNA glycosylase superfamily Alvin_0357 SM00987 UreE urease accessory protein, C-terminal domain Alvin_0360 SM00487 DEAD-like helicases superfamily Alvin_0360 SM00490 helicase superfamily c-terminal domain Alvin_0362 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_0362 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0362 SM01358 Alvin_0362 Alvin_0363 SM00387 Histidine kinase-like ATPases Alvin_0363 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0370 SM00331 Sigma factor PP2C-like phosphatases Alvin_0370 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Alvin_0381 SM00382 ATPases associated with a variety of cellular activities Alvin_0387 SM00479 Alvin_0387 Alvin_0388 SM00100 Cyclic nucleotide-monophosphate binding domain Alvin_0388 SM00419 helix_turn_helix, cAMP Regulatory protein Alvin_0391 SM01192 Alvin_0391 Alvin_0391 SM01193 Alvin_0391 Alvin_0396 SM00448 cheY-homologous receiver domain Alvin_0400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_0400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0417 SM00493 Alvin_0417 Alvin_0419 SM00382 ATPases associated with a variety of cellular activities Alvin_0424 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0424 SM00387 Histidine kinase-like ATPases Alvin_0424 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0424 SM00448 cheY-homologous receiver domain Alvin_0425 SM00052 Putative diguanylate phosphodiesterase Alvin_0425 SM00267 diguanylate cyclase Alvin_0425 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0425 SM00448 cheY-homologous receiver domain Alvin_0430 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_0435 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_0435 SM00387 Histidine kinase-like ATPases Alvin_0435 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0435 SM00448 cheY-homologous receiver domain Alvin_0436 SM00849 Metallo-beta-lactamase superfamily Alvin_0437 SM00861 Transketolase, pyrimidine binding domain Alvin_0438 SM00840 Alvin_0438 Alvin_0440 SM00883 Chaperonin 10 Kd subunit Alvin_0458 SM00091 PAS domain Alvin_0458 SM00267 diguanylate cyclase Alvin_0459 SM00986 Uracil DNA glycosylase superfamily Alvin_0459 SM00987 UreE urease accessory protein, C-terminal domain Alvin_0461 SM00448 cheY-homologous receiver domain Alvin_0467 SM00305 Hint (Hedgehog/Intein) domain C-terminal region Alvin_0467 SM00306 Hint (Hedgehog/Intein) domain N-terminal region Alvin_0467 SM00481 DNA polymerase alpha chain like domain Alvin_0481 SM00382 ATPases associated with a variety of cellular activities Alvin_0482 SM00382 ATPases associated with a variety of cellular activities Alvin_0485 SM00073 Histidine Phosphotransfer domain Alvin_0485 SM00387 Histidine kinase-like ATPases Alvin_0485 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0485 SM00448 cheY-homologous receiver domain Alvin_0487 SM01018 B12 binding domain Alvin_0491 SM00382 ATPases associated with a variety of cellular activities Alvin_0501 SM00316 Ribosomal protein S1-like RNA-binding domain Alvin_0505 SM01387 Alvin_0505 Alvin_0506 SM00316 Ribosomal protein S1-like RNA-binding domain Alvin_0506 SM00322 K homology RNA-binding domain Alvin_0513 SM00382 ATPases associated with a variety of cellular activities Alvin_0526 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_0526 SM00876 Biotin and Thiamin Synthesis associated domain Alvin_0543 SM00460 Transglutaminase/protease-like homologues Alvin_0546 SM00382 ATPases associated with a variety of cellular activities Alvin_0552 SM00382 ATPases associated with a variety of cellular activities Alvin_0561 SM00341 Helicase and RNase D C-terminal Alvin_0561 SM00487 DEAD-like helicases superfamily Alvin_0561 SM00490 helicase superfamily c-terminal domain Alvin_0561 SM00956 Alvin_0561 Alvin_0563 SM00267 diguanylate cyclase Alvin_0563 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0565 SM00900 Alvin_0565 Alvin_0575 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_0576 SM01091 Transporter associated domain Alvin_0589 SM00260 Two component signalling adaptor domain Alvin_0590 SM00073 Histidine Phosphotransfer domain Alvin_0590 SM00267 diguanylate cyclase Alvin_0590 SM00448 cheY-homologous receiver domain Alvin_0591 SM00448 cheY-homologous receiver domain Alvin_0592 SM00073 Histidine Phosphotransfer domain Alvin_0592 SM00260 Two component signalling adaptor domain Alvin_0592 SM00387 Histidine kinase-like ATPases Alvin_0592 SM00448 cheY-homologous receiver domain Alvin_0592 SM01231 Alvin_0592 Alvin_0593 SM00138 Methyltransferase, chemotaxis proteins Alvin_0594 SM00448 cheY-homologous receiver domain Alvin_0595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_0595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0599 SM00223 APPLE domain Alvin_0599 SM01359 Alvin_0599 Alvin_0599 SM01360 Alvin_0599 Alvin_0603 SM00267 diguanylate cyclase Alvin_0604 SM00357 Cold shock protein domain Alvin_0604 SM00382 ATPases associated with a variety of cellular activities Alvin_0604 SM00959 Rho termination factor, N-terminal domain Alvin_0606 SM00487 DEAD-like helicases superfamily Alvin_0606 SM00490 helicase superfamily c-terminal domain Alvin_0618 SM01068 Putative carbohydrate binding domain Alvin_0622 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Alvin_0625 SM00966 SpoVT / AbrB like domain Alvin_0632 SM00382 ATPases associated with a variety of cellular activities Alvin_0634 SM00257 Lysin motif Alvin_0639 SM00091 PAS domain Alvin_0639 SM00387 Histidine kinase-like ATPases Alvin_0639 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0640 SM00421 helix_turn_helix, Lux Regulon Alvin_0640 SM00448 cheY-homologous receiver domain Alvin_0644 SM00507 HNH nucleases Alvin_0649 SM01101 Alvin_0649 Alvin_0656 SM00487 DEAD-like helicases superfamily Alvin_0656 SM00490 helicase superfamily c-terminal domain Alvin_0662 SM00858 Alvin_0662 Alvin_0663 SM00260 Two component signalling adaptor domain Alvin_0663 SM00448 cheY-homologous receiver domain Alvin_0664 SM00138 Methyltransferase, chemotaxis proteins Alvin_0673 SM00047 Lysozyme subfamily 2 Alvin_0676 SM00052 Putative diguanylate phosphodiesterase Alvin_0676 SM00091 PAS domain Alvin_0676 SM00267 diguanylate cyclase Alvin_0678 SM00100 Cyclic nucleotide-monophosphate binding domain Alvin_0678 SM00419 helix_turn_helix, cAMP Regulatory protein Alvin_0680 SM00704 CDGSH-type zinc finger. Function unknown. Alvin_0681 SM00244 prohibitin homologues Alvin_0694 SM00977 TilS substrate C-terminal domain Alvin_0695 SM00091 PAS domain Alvin_0695 SM00387 Histidine kinase-like ATPases Alvin_0695 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0695 SM00448 cheY-homologous receiver domain Alvin_0698 SM00421 helix_turn_helix, Lux Regulon Alvin_0698 SM00448 cheY-homologous receiver domain Alvin_0699 SM00091 PAS domain Alvin_0699 SM00387 Histidine kinase-like ATPases Alvin_0699 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0699 SM00448 cheY-homologous receiver domain Alvin_0700 SM01248 Alvin_0700 Alvin_0701 SM01248 Alvin_0701 Alvin_0702 SM00382 ATPases associated with a variety of cellular activities Alvin_0710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_0710 SM00387 Histidine kinase-like ATPases Alvin_0710 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0710 SM00448 cheY-homologous receiver domain Alvin_0711 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Alvin_0712 SM00851 MGS-like domain Alvin_0712 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Alvin_0718 SM00834 Putative regulatory protein Alvin_0722 SM00382 ATPases associated with a variety of cellular activities Alvin_0723 SM00091 PAS domain Alvin_0723 SM00387 Histidine kinase-like ATPases Alvin_0723 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0723 SM00448 cheY-homologous receiver domain Alvin_0723 SM01079 Alvin_0723 Alvin_0724 SM00052 Putative diguanylate phosphodiesterase Alvin_0724 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_0724 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_0724 SM00448 cheY-homologous receiver domain Alvin_0725 SM00226 Low molecular weight phosphatase family Alvin_0726 SM00316 Ribosomal protein S1-like RNA-binding domain Alvin_0727 SM00363 S4 RNA-binding domain Alvin_0733 SM00318 Staphylococcal nuclease homologues Alvin_0740 SM00382 ATPases associated with a variety of cellular activities Alvin_0744 SM00382 ATPases associated with a variety of cellular activities Alvin_0750 SM00421 helix_turn_helix, Lux Regulon Alvin_0750 SM00448 cheY-homologous receiver domain Alvin_0751 SM00091 PAS domain Alvin_0751 SM00387 Histidine kinase-like ATPases Alvin_0751 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0751 SM00448 cheY-homologous receiver domain Alvin_0752 SM00138 Methyltransferase, chemotaxis proteins Alvin_0764 SM00271 DnaJ molecular chaperone homology domain Alvin_0769 SM00387 Histidine kinase-like ATPases Alvin_0769 SM00433 TopoisomeraseII Alvin_0776 SM00463 Small MutS-related domain Alvin_0779 SM00257 Lysin motif Alvin_0789 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_0789 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0793 SM00938 Nitrogen regulatory protein P-II Alvin_0795 SM00363 S4 RNA-binding domain Alvin_0799 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Alvin_0799 SM00245 tail specific protease Alvin_0817 SM00327 von Willebrand factor (vWF) type A domain Alvin_0819 SM00028 Tetratricopeptide repeats Alvin_0819 SM00448 cheY-homologous receiver domain Alvin_0820 SM01209 Alvin_0820 Alvin_0820 SM01210 Alvin_0820 Alvin_0822 SM00798 AICARFT/IMPCHase bienzyme Alvin_0822 SM00851 MGS-like domain Alvin_0834 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Alvin_0834 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Alvin_0843 SM00100 Cyclic nucleotide-monophosphate binding domain Alvin_0846 SM00382 ATPases associated with a variety of cellular activities Alvin_0848 SM00849 Metallo-beta-lactamase superfamily Alvin_0850 SM00855 Phosphoglycerate mutase family Alvin_0854 SM00883 Chaperonin 10 Kd subunit Alvin_0858 SM00327 von Willebrand factor (vWF) type A domain Alvin_0866 SM00450 Rhodanese Homology Domain Alvin_0868 SM00450 Rhodanese Homology Domain Alvin_0871 SM00382 ATPases associated with a variety of cellular activities Alvin_0881 SM00404 Protein tyrosine phosphatase, catalytic domain motif Alvin_0883 SM00052 Putative diguanylate phosphodiesterase Alvin_0884 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_0884 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0885 SM00382 ATPases associated with a variety of cellular activities Alvin_0889 SM00479 Alvin_0889 Alvin_0927 SM00116 Domain in cystathionine beta-synthase and other proteins. Alvin_0935 SM00091 PAS domain Alvin_0935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_0939 SM00849 Metallo-beta-lactamase superfamily Alvin_0943 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0943 SM00387 Histidine kinase-like ATPases Alvin_0943 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0944 SM00448 cheY-homologous receiver domain Alvin_0944 SM00862 Transcriptional regulatory protein, C terminal Alvin_0957 SM00028 Tetratricopeptide repeats Alvin_0958 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_0959 SM00052 Putative diguanylate phosphodiesterase Alvin_0959 SM00091 PAS domain Alvin_0959 SM00267 diguanylate cyclase Alvin_0962 SM00248 ankyrin repeats Alvin_0963 SM00346 helix_turn_helix isocitrate lyase regulation Alvin_0964 SM00861 Transketolase, pyrimidine binding domain Alvin_0966 SM00382 ATPases associated with a variety of cellular activities Alvin_0968 SM00831 Cation transporter/ATPase, N-terminus Alvin_0969 SM00382 ATPases associated with a variety of cellular activities Alvin_0969 SM00464 Found in ATP-dependent protease La (LON) Alvin_0971 SM00267 diguanylate cyclase Alvin_0972 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_0973 SM00388 His Kinase A (phosphoacceptor) domain Alvin_0973 SM00448 cheY-homologous receiver domain Alvin_0976 SM00382 ATPases associated with a variety of cellular activities Alvin_0977 SM00267 diguanylate cyclase Alvin_0977 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_0978 SM00829 Enoylreductase Alvin_0980 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Alvin_0985 SM00873 B3/4 domain Alvin_0985 SM00874 tRNA synthetase B5 domain Alvin_0985 SM00896 Ferredoxin-fold anticodon binding domain Alvin_0986 SM00411 bacterial (prokaryotic) histone like domain Alvin_0987 SM00422 helix_turn_helix, mercury resistance Alvin_1011 SM00090 RIO-like kinase Alvin_1017 SM00382 ATPases associated with a variety of cellular activities Alvin_1020 SM00054 EF-hand, calcium binding motif Alvin_1022 SM00363 S4 RNA-binding domain Alvin_1028 SM00327 von Willebrand factor (vWF) type A domain Alvin_1029 SM00327 von Willebrand factor (vWF) type A domain Alvin_1031 SM00220 Serine/Threonine protein kinases, catalytic domain Alvin_1032 SM00530 Helix-turn-helix XRE-family like proteins Alvin_1037 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_1040 SM00052 Putative diguanylate phosphodiesterase Alvin_1044 SM00052 Putative diguanylate phosphodiesterase Alvin_1044 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_1044 SM00091 PAS domain Alvin_1044 SM00267 diguanylate cyclase Alvin_1044 SM01034 Sensors of blue-light using FAD Alvin_1050 SM00382 ATPases associated with a variety of cellular activities Alvin_1054 SM00073 Histidine Phosphotransfer domain Alvin_1054 SM00387 Histidine kinase-like ATPases Alvin_1054 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1054 SM00448 cheY-homologous receiver domain Alvin_1055 SM00507 HNH nucleases Alvin_1056 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_1056 SM00091 PAS domain Alvin_1056 SM00387 Histidine kinase-like ATPases Alvin_1056 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1056 SM00448 cheY-homologous receiver domain Alvin_1057 SM00387 Histidine kinase-like ATPases Alvin_1058 SM00421 helix_turn_helix, Lux Regulon Alvin_1058 SM00448 cheY-homologous receiver domain Alvin_1064 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_1067 SM00387 Histidine kinase-like ATPases Alvin_1067 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1068 SM00382 ATPases associated with a variety of cellular activities Alvin_1068 SM00448 cheY-homologous receiver domain Alvin_1069 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_1069 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_1071 SM00062 Bacterial periplasmic substrate-binding proteins Alvin_1071 SM00387 Histidine kinase-like ATPases Alvin_1071 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1072 SM00052 Putative diguanylate phosphodiesterase Alvin_1072 SM00267 diguanylate cyclase Alvin_1072 SM00448 cheY-homologous receiver domain Alvin_1080 SM00052 Putative diguanylate phosphodiesterase Alvin_1080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_1080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_1080 SM00091 PAS domain Alvin_1080 SM00267 diguanylate cyclase Alvin_1094 SM00248 ankyrin repeats Alvin_1098 SM00382 ATPases associated with a variety of cellular activities Alvin_1100 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Alvin_1103 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Alvin_1103 SM00534 ATPase domain of DNA mismatch repair MUTS family Alvin_1108 SM00382 ATPases associated with a variety of cellular activities Alvin_1128 SM00491 Alvin_1128 Alvin_1130 SM00271 DnaJ molecular chaperone homology domain Alvin_1131 SM00382 ATPases associated with a variety of cellular activities Alvin_1136 SM00382 ATPases associated with a variety of cellular activities Alvin_1147 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_1147 SM00091 PAS domain Alvin_1147 SM00267 diguanylate cyclase Alvin_1148 SM00419 helix_turn_helix, cAMP Regulatory protein Alvin_1155 SM01068 Putative carbohydrate binding domain Alvin_1161 SM00387 Histidine kinase-like ATPases Alvin_1161 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1162 SM00448 cheY-homologous receiver domain Alvin_1162 SM00862 Transcriptional regulatory protein, C terminal Alvin_1169 SM00091 PAS domain Alvin_1169 SM00138 Methyltransferase, chemotaxis proteins Alvin_1170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_1170 SM00091 PAS domain Alvin_1170 SM00267 diguanylate cyclase Alvin_1175 SM00900 Alvin_1175 Alvin_1180 SM00904 Riboflavin kinase Alvin_1182 SM00382 ATPases associated with a variety of cellular activities Alvin_1183 SM00327 von Willebrand factor (vWF) type A domain Alvin_1184 SM00382 ATPases associated with a variety of cellular activities Alvin_1184 SM00448 cheY-homologous receiver domain Alvin_1187 SM00671 Sel1-like repeats. Alvin_1193 SM00382 ATPases associated with a variety of cellular activities Alvin_1200 SM01323 Alvin_1200 Alvin_1208 SM00267 diguanylate cyclase Alvin_1210 SM00331 Sigma factor PP2C-like phosphatases Alvin_1212 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_1213 SM00434 DNA Topoisomerase IV Alvin_1214 SM00448 cheY-homologous receiver domain Alvin_1214 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_1221 SM00257 Lysin motif Alvin_1221 SM00646 Alvin_1221 Alvin_1222 SM00853 MutL C terminal dimerisation domain Alvin_1222 SM01340 Alvin_1222 Alvin_1226 SM00244 prohibitin homologues Alvin_1227 SM00244 prohibitin homologues Alvin_1230 SM00788 Adenylosuccinate synthetase Alvin_1241 SM01118 Alvin_1241 Alvin_1266 SM00382 ATPases associated with a variety of cellular activities Alvin_1274 SM00564 beta-propeller repeat Alvin_1278 SM00028 Tetratricopeptide repeats Alvin_1280 SM00562 Alvin_1280 Alvin_1282 SM00937 Alvin_1282 Alvin_1285 SM00955 Alvin_1285 Alvin_1291 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_1291 SM00382 ATPases associated with a variety of cellular activities Alvin_1293 SM00938 Nitrogen regulatory protein P-II Alvin_1310 SM00267 diguanylate cyclase Alvin_1314 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Alvin_1317 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Alvin_1333 SM00771 ZipA, C-terminal domain (FtsZ-binding) Alvin_1334 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Alvin_1334 SM00292 breast cancer carboxy-terminal domain Alvin_1334 SM00532 Ligase N family Alvin_1341 SM00831 Cation transporter/ATPase, N-terminus Alvin_1343 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_1359 SM00382 ATPases associated with a variety of cellular activities Alvin_1359 SM01086 C-terminal, D2-small domain, of ClpB protein Alvin_1360 SM00382 ATPases associated with a variety of cellular activities Alvin_1362 SM00116 Domain in cystathionine beta-synthase and other proteins. Alvin_1362 SM00924 MgtE intracellular N domain Alvin_1366 SM00961 Ribulose bisphosphate carboxylase, small chain Alvin_1368 SM00327 von Willebrand factor (vWF) type A domain Alvin_1369 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_1370 SM00448 cheY-homologous receiver domain Alvin_1371 SM00448 cheY-homologous receiver domain Alvin_1371 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_1372 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_1372 SM00091 PAS domain Alvin_1372 SM00387 Histidine kinase-like ATPases Alvin_1372 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1372 SM00448 cheY-homologous receiver domain Alvin_1372 SM01079 Alvin_1372 Alvin_1373 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_1373 SM00091 PAS domain Alvin_1373 SM00138 Methyltransferase, chemotaxis proteins Alvin_1373 SM00387 Histidine kinase-like ATPases Alvin_1373 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1373 SM00448 cheY-homologous receiver domain Alvin_1374 SM00091 PAS domain Alvin_1374 SM00387 Histidine kinase-like ATPases Alvin_1374 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1374 SM00448 cheY-homologous receiver domain Alvin_1375 SM00062 Bacterial periplasmic substrate-binding proteins Alvin_1376 SM00091 PAS domain Alvin_1376 SM00387 Histidine kinase-like ATPases Alvin_1376 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1376 SM00448 cheY-homologous receiver domain Alvin_1378 SM00344 helix_turn_helix ASNC type Alvin_1379 SM00917 LeuA allosteric (dimerisation) domain Alvin_1380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_1387 SM00271 DnaJ molecular chaperone homology domain Alvin_1397 SM00267 diguanylate cyclase Alvin_1416 SM00387 Histidine kinase-like ATPases Alvin_1422 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_1425 SM00382 ATPases associated with a variety of cellular activities Alvin_1425 SM00994 ClpX C4-type zinc finger Alvin_1425 SM01086 C-terminal, D2-small domain, of ClpB protein Alvin_1426 SM00382 ATPases associated with a variety of cellular activities Alvin_1426 SM00464 Found in ATP-dependent protease La (LON) Alvin_1427 SM00411 bacterial (prokaryotic) histone like domain Alvin_1433 SM00382 ATPases associated with a variety of cellular activities Alvin_1436 SM00357 Cold shock protein domain Alvin_1437 SM00843 Alvin_1437 Alvin_1439 SM00450 Rhodanese Homology Domain Alvin_1444 SM00507 HNH nucleases Alvin_1450 SM00382 ATPases associated with a variety of cellular activities Alvin_1457 SM00382 ATPases associated with a variety of cellular activities Alvin_1465 SM00347 helix_turn_helix multiple antibiotic resistance protein Alvin_1467 SM00829 Enoylreductase Alvin_1468 SM00867 YceI-like domain Alvin_1471 SM00248 ankyrin repeats Alvin_1477 SM00642 Alpha-amylase domain Alvin_1479 SM00849 Metallo-beta-lactamase superfamily Alvin_1481 SM00935 Outer membrane protein (OmpH-like) Alvin_1488 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Alvin_1488 SM00474 3'-5' exonuclease Alvin_1488 SM00475 5'-3' exonuclease Alvin_1488 SM00482 DNA polymerase A domain Alvin_1489 SM00091 PAS domain Alvin_1489 SM00387 Histidine kinase-like ATPases Alvin_1489 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1489 SM00448 cheY-homologous receiver domain Alvin_1489 SM01079 Alvin_1489 Alvin_1490 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_1490 SM00091 PAS domain Alvin_1490 SM00387 Histidine kinase-like ATPases Alvin_1490 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1490 SM00448 cheY-homologous receiver domain Alvin_1491 SM00091 PAS domain Alvin_1491 SM00387 Histidine kinase-like ATPases Alvin_1491 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1491 SM00448 cheY-homologous receiver domain Alvin_1493 SM00487 DEAD-like helicases superfamily Alvin_1493 SM00490 helicase superfamily c-terminal domain Alvin_1501 SM00563 Phosphate acyltransferases Alvin_1504 SM00387 Histidine kinase-like ATPases Alvin_1504 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1506 SM00881 CoA binding domain Alvin_1526 SM00899 Alvin_1526 Alvin_1527 SM00899 Alvin_1527 Alvin_1530 SM00226 Low molecular weight phosphatase family Alvin_1530 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Alvin_1536 SM00052 Putative diguanylate phosphodiesterase Alvin_1536 SM00267 diguanylate cyclase Alvin_1543 SM01154 Alvin_1543 Alvin_1546 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Alvin_1546 SM00465 GIY-YIG type nucleases (URI domain) Alvin_1564 SM00382 ATPases associated with a variety of cellular activities Alvin_1573 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_1573 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_1574 SM00448 cheY-homologous receiver domain Alvin_1576 SM00138 Methyltransferase, chemotaxis proteins Alvin_1577 SM00260 Two component signalling adaptor domain Alvin_1578 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_1578 SM01358 Alvin_1578 Alvin_1579 SM00073 Histidine Phosphotransfer domain Alvin_1579 SM00260 Two component signalling adaptor domain Alvin_1579 SM00387 Histidine kinase-like ATPases Alvin_1579 SM01231 Alvin_1579 Alvin_1581 SM00507 HNH nucleases Alvin_1582 SM00448 cheY-homologous receiver domain Alvin_1583 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_1585 SM00650 Ribosomal RNA adenine dimethylases Alvin_1587 SM00450 Rhodanese Homology Domain Alvin_1592 SM01211 Alvin_1592 Alvin_1593 SM00967 RNA 2'-O ribose methyltransferase substrate binding Alvin_1594 SM00316 Ribosomal protein S1-like RNA-binding domain Alvin_1594 SM00357 Cold shock protein domain Alvin_1594 SM00955 Alvin_1594 Alvin_1605 SM00859 Semialdehyde dehydrogenase, NAD binding domain Alvin_1606 SM01329 Alvin_1606 Alvin_1622 SM01018 B12 binding domain Alvin_1627 SM00642 Alpha-amylase domain Alvin_1628 SM01350 Alvin_1628 Alvin_1630 SM00257 Lysin motif Alvin_1642 SM00448 cheY-homologous receiver domain Alvin_1642 SM00862 Transcriptional regulatory protein, C terminal Alvin_1643 SM00091 PAS domain Alvin_1643 SM00387 Histidine kinase-like ATPases Alvin_1643 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1644 SM00411 bacterial (prokaryotic) histone like domain Alvin_1645 SM00316 Ribosomal protein S1-like RNA-binding domain Alvin_1648 SM01103 Alvin_1648 Alvin_1669 SM00878 Biotin carboxylase C-terminal domain Alvin_1670 SM00671 Sel1-like repeats. Alvin_1675 SM00382 ATPases associated with a variety of cellular activities Alvin_1684 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_1691 SM00382 ATPases associated with a variety of cellular activities Alvin_1718 SM00358 Double-stranded RNA binding motif Alvin_1718 SM00535 Ribonuclease III family Alvin_1721 SM00838 Elongation factor G C-terminus Alvin_1722 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Alvin_1728 SM00881 CoA binding domain Alvin_1750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_1750 SM00387 Histidine kinase-like ATPases Alvin_1750 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1750 SM00448 cheY-homologous receiver domain Alvin_1751 SM00387 Histidine kinase-like ATPases Alvin_1751 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1751 SM00448 cheY-homologous receiver domain Alvin_1752 SM00014 Acid phosphatase homologues Alvin_1754 SM00841 Elongation factor P, C-terminal Alvin_1754 SM01185 Alvin_1754 Alvin_1756 SM00052 Putative diguanylate phosphodiesterase Alvin_1756 SM00267 diguanylate cyclase Alvin_1758 SM00382 ATPases associated with a variety of cellular activities Alvin_1771 SM00448 cheY-homologous receiver domain Alvin_1788 SM00382 ATPases associated with a variety of cellular activities Alvin_1788 SM00448 cheY-homologous receiver domain Alvin_1789 SM00387 Histidine kinase-like ATPases Alvin_1789 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1805 SM00028 Tetratricopeptide repeats Alvin_1813 SM00671 Sel1-like repeats. Alvin_1815 SM00267 diguanylate cyclase Alvin_1818 SM01091 Transporter associated domain Alvin_1819 SM01091 Transporter associated domain Alvin_1825 SM00382 ATPases associated with a variety of cellular activities Alvin_1829 SM01005 Alanine racemase, C-terminal domain Alvin_1833 SM00905 Dihydroneopterin aldolase Alvin_1834 SM01207 Alvin_1834 Alvin_1836 SM00387 Histidine kinase-like ATPases Alvin_1842 SM00400 zinc finger Alvin_1842 SM00493 Alvin_1842 Alvin_1842 SM00766 DNA primase DnaG DnaB-binding Alvin_1844 SM00382 ATPases associated with a variety of cellular activities Alvin_1855 SM00478 endonuclease III Alvin_1859 SM00267 diguanylate cyclase Alvin_1865 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Alvin_1866 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Alvin_1872 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_1872 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_1873 SM00091 PAS domain Alvin_1873 SM00387 Histidine kinase-like ATPases Alvin_1873 SM00388 His Kinase A (phosphoacceptor) domain Alvin_1873 SM00448 cheY-homologous receiver domain Alvin_1883 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_1883 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_1885 SM00382 ATPases associated with a variety of cellular activities Alvin_1889 SM00825 Beta-ketoacyl synthase Alvin_1890 SM00823 Phosphopantetheine attachment site Alvin_1891 SM00822 Alvin_1891 Alvin_1892 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Alvin_1897 SM00421 helix_turn_helix, Lux Regulon Alvin_1897 SM00448 cheY-homologous receiver domain Alvin_1900 SM00028 Tetratricopeptide repeats Alvin_1900 SM00327 von Willebrand factor (vWF) type A domain Alvin_1901 SM00327 von Willebrand factor (vWF) type A domain Alvin_1906 SM00878 Biotin carboxylase C-terminal domain Alvin_1917 SM00479 Alvin_1917 Alvin_1924 SM00877 Alvin_1924 Alvin_1926 SM00852 Probable molybdopterin binding domain Alvin_1927 SM00852 Probable molybdopterin binding domain Alvin_1943 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_1947 SM00028 Tetratricopeptide repeats Alvin_1948 SM00028 Tetratricopeptide repeats Alvin_1950 SM00028 Tetratricopeptide repeats Alvin_1971 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_1972 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_1976 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_1982 SM00382 ATPases associated with a variety of cellular activities Alvin_1982 SM00487 DEAD-like helicases superfamily Alvin_1982 SM00490 helicase superfamily c-terminal domain Alvin_1982 SM00847 Helicase associated domain (HA2) Add an annotation Alvin_1983 SM00267 diguanylate cyclase Alvin_1983 SM00448 cheY-homologous receiver domain Alvin_1987 SM00306 Hint (Hedgehog/Intein) domain N-terminal region Alvin_1987 SM00434 DNA Topoisomerase IV Alvin_1988 SM00052 Putative diguanylate phosphodiesterase Alvin_1995 SM00305 Hint (Hedgehog/Intein) domain C-terminal region Alvin_1995 SM00306 Hint (Hedgehog/Intein) domain N-terminal region Alvin_2001 SM00100 Cyclic nucleotide-monophosphate binding domain Alvin_2005 SM00670 Large family of predicted nucleotide-binding domains Alvin_2017 SM01321 Alvin_2017 Alvin_2018 SM00487 DEAD-like helicases superfamily Alvin_2018 SM00490 helicase superfamily c-terminal domain Alvin_2018 SM00847 Helicase associated domain (HA2) Add an annotation Alvin_2019 SM01057 Eukaryotic-type carbonic anhydrase Alvin_2029 SM00327 von Willebrand factor (vWF) type A domain Alvin_2042 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_2051 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Alvin_2053 SM00935 Outer membrane protein (OmpH-like) Alvin_2068 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_2069 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Alvin_2069 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Alvin_2069 SM00493 Alvin_2069 Alvin_2072 SM00257 Lysin motif Alvin_2077 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2077 SM00387 Histidine kinase-like ATPases Alvin_2077 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2078 SM00448 cheY-homologous receiver domain Alvin_2084 SM00830 Chorismate mutase type II Alvin_2094 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2094 SM00331 Sigma factor PP2C-like phosphatases Alvin_2098 SM00849 Metallo-beta-lactamase superfamily Alvin_2108 SM00382 ATPases associated with a variety of cellular activities Alvin_2118 SM00357 Cold shock protein domain Alvin_2119 SM00316 Ribosomal protein S1-like RNA-binding domain Alvin_2119 SM00732 Likely ribonuclease with RNase H fold. Alvin_2131 SM00642 Alpha-amylase domain Alvin_2135 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Alvin_2155 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Alvin_2160 SM00091 PAS domain Alvin_2165 SM00267 diguanylate cyclase Alvin_2165 SM00448 cheY-homologous receiver domain Alvin_2166 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2166 SM00091 PAS domain Alvin_2166 SM00387 Histidine kinase-like ATPases Alvin_2166 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2166 SM00448 cheY-homologous receiver domain Alvin_2171 SM00450 Rhodanese Homology Domain Alvin_2172 SM00507 HNH nucleases Alvin_2173 SM00981 Alvin_2173 Alvin_2174 SM00382 ATPases associated with a variety of cellular activities Alvin_2184 SM00838 Elongation factor G C-terminus Alvin_2184 SM00889 Elongation factor G, domain IV Alvin_2190 SM00363 S4 RNA-binding domain Alvin_2196 SM00481 DNA polymerase alpha chain like domain Alvin_2199 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_2200 SM00052 Putative diguanylate phosphodiesterase Alvin_2200 SM00267 diguanylate cyclase Alvin_2209 SM00763 PrkA AAA domain Alvin_2210 SM00507 HNH nucleases Alvin_2211 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2211 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2213 SM00984 UDP binding domain Alvin_2216 SM01091 Transporter associated domain Alvin_2218 SM01329 Alvin_2218 Alvin_2219 SM00357 Cold shock protein domain Alvin_2221 SM00382 ATPases associated with a variety of cellular activities Alvin_2221 SM01086 C-terminal, D2-small domain, of ClpB protein Alvin_2222 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2222 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2224 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_2230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2233 SM00448 cheY-homologous receiver domain Alvin_2234 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2236 SM00138 Methyltransferase, chemotaxis proteins Alvin_2237 SM00260 Two component signalling adaptor domain Alvin_2238 SM00073 Histidine Phosphotransfer domain Alvin_2238 SM00260 Two component signalling adaptor domain Alvin_2238 SM00387 Histidine kinase-like ATPases Alvin_2238 SM01231 Alvin_2238 Alvin_2239 SM00448 cheY-homologous receiver domain Alvin_2240 SM00487 DEAD-like helicases superfamily Alvin_2240 SM00490 helicase superfamily c-terminal domain Alvin_2240 SM00982 Alvin_2240 Alvin_2240 SM01058 CarD-like/TRCF domain Alvin_2255 SM00899 Alvin_2255 Alvin_2258 SM00267 diguanylate cyclase Alvin_2259 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_2266 SM00382 ATPases associated with a variety of cellular activities Alvin_2271 SM00382 ATPases associated with a variety of cellular activities Alvin_2279 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2280 SM00316 Ribosomal protein S1-like RNA-binding domain Alvin_2286 SM00267 diguanylate cyclase Alvin_2289 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Alvin_2313 SM00100 Cyclic nucleotide-monophosphate binding domain Alvin_2316 SM00387 Histidine kinase-like ATPases Alvin_2316 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2316 SM00448 cheY-homologous receiver domain Alvin_2317 SM00091 PAS domain Alvin_2317 SM00387 Histidine kinase-like ATPases Alvin_2317 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2318 SM00091 PAS domain Alvin_2318 SM00138 Methyltransferase, chemotaxis proteins Alvin_2319 SM00091 PAS domain Alvin_2319 SM00387 Histidine kinase-like ATPases Alvin_2319 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2324 SM00382 ATPases associated with a variety of cellular activities Alvin_2327 SM00938 Nitrogen regulatory protein P-II Alvin_2329 SM01034 Sensors of blue-light using FAD Alvin_2334 SM00062 Bacterial periplasmic substrate-binding proteins Alvin_2334 SM00073 Histidine Phosphotransfer domain Alvin_2334 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2334 SM00091 PAS domain Alvin_2334 SM00387 Histidine kinase-like ATPases Alvin_2334 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2334 SM00448 cheY-homologous receiver domain Alvin_2335 SM00487 DEAD-like helicases superfamily Alvin_2335 SM00490 helicase superfamily c-terminal domain Alvin_2338 SM00662 RNA polymerases D Alvin_2339 SM00363 S4 RNA-binding domain Alvin_2339 SM01390 Alvin_2339 Alvin_2352 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Alvin_2353 SM01374 Alvin_2353 Alvin_2357 SM00322 K homology RNA-binding domain Alvin_2360 SM01382 Alvin_2360 Alvin_2360 SM01383 Alvin_2360 Alvin_2364 SM01403 Alvin_2364 Alvin_2366 SM00838 Elongation factor G C-terminus Alvin_2366 SM00889 Elongation factor G, domain IV Alvin_2369 SM00663 RNA polymerase I subunit A N-terminus Alvin_2374 SM00649 Ribosomal protein L11/L12 Alvin_2375 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Alvin_2375 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Alvin_2378 SM00984 UDP binding domain Alvin_2382 SM01400 Alvin_2382 Alvin_2384 SM00028 Tetratricopeptide repeats Alvin_2386 SM00937 Alvin_2386 Alvin_2388 SM00563 Phosphate acyltransferases Alvin_2394 SM00267 diguanylate cyclase Alvin_2394 SM00448 cheY-homologous receiver domain Alvin_2395 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2395 SM00091 PAS domain Alvin_2395 SM00387 Histidine kinase-like ATPases Alvin_2395 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2395 SM00448 cheY-homologous receiver domain Alvin_2397 SM00382 ATPases associated with a variety of cellular activities Alvin_2397 SM00962 SRP54-type protein, GTPase domain Alvin_2397 SM00963 SRP54-type protein, helical bundle domain Alvin_2405 SM00778 Zinc-binding domain of primase-helicase Alvin_2411 SM01130 Alvin_2411 Alvin_2424 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Alvin_2425 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Alvin_2438 SM00831 Cation transporter/ATPase, N-terminus Alvin_2441 SM00382 ATPases associated with a variety of cellular activities Alvin_2451 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Alvin_2455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2455 SM01049 Alvin_2455 Alvin_2461 SM00448 cheY-homologous receiver domain Alvin_2463 SM00091 PAS domain Alvin_2463 SM00267 diguanylate cyclase Alvin_2464 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2465 SM00260 Two component signalling adaptor domain Alvin_2466 SM00448 cheY-homologous receiver domain Alvin_2468 SM00138 Methyltransferase, chemotaxis proteins Alvin_2469 SM00448 cheY-homologous receiver domain Alvin_2470 SM00073 Histidine Phosphotransfer domain Alvin_2470 SM00260 Two component signalling adaptor domain Alvin_2470 SM00387 Histidine kinase-like ATPases Alvin_2470 SM01231 Alvin_2470 Alvin_2472 SM00448 cheY-homologous receiver domain Alvin_2473 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2476 SM00387 Histidine kinase-like ATPases Alvin_2478 SM00331 Sigma factor PP2C-like phosphatases Alvin_2479 SM00387 Histidine kinase-like ATPases Alvin_2479 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2480 SM00448 cheY-homologous receiver domain Alvin_2481 SM00479 Alvin_2481 Alvin_2486 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Alvin_2488 SM00091 PAS domain Alvin_2488 SM00387 Histidine kinase-like ATPases Alvin_2488 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2488 SM00448 cheY-homologous receiver domain Alvin_2491 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Alvin_2495 SM00382 ATPases associated with a variety of cellular activities Alvin_2496 SM00100 Cyclic nucleotide-monophosphate binding domain Alvin_2496 SM00419 helix_turn_helix, cAMP Regulatory protein Alvin_2505 SM00478 endonuclease III Alvin_2505 SM00525 Alvin_2505 Alvin_2509 SM00448 cheY-homologous receiver domain Alvin_2509 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_2512 SM00448 cheY-homologous receiver domain Alvin_2513 SM00091 PAS domain Alvin_2513 SM00387 Histidine kinase-like ATPases Alvin_2513 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2513 SM00448 cheY-homologous receiver domain Alvin_2514 SM00448 cheY-homologous receiver domain Alvin_2523 SM00316 Ribosomal protein S1-like RNA-binding domain Alvin_2534 SM00487 DEAD-like helicases superfamily Alvin_2534 SM00490 helicase superfamily c-terminal domain Alvin_2543 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_2581 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2581 SM00387 Histidine kinase-like ATPases Alvin_2581 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2582 SM00448 cheY-homologous receiver domain Alvin_2582 SM00862 Transcriptional regulatory protein, C terminal Alvin_2596 SM01321 Alvin_2596 Alvin_2599 SM00450 Rhodanese Homology Domain Alvin_2603 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2603 SM00387 Histidine kinase-like ATPases Alvin_2603 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2604 SM00448 cheY-homologous receiver domain Alvin_2605 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_2605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2605 SM00091 PAS domain Alvin_2605 SM00387 Histidine kinase-like ATPases Alvin_2605 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2605 SM00448 cheY-homologous receiver domain Alvin_2612 SM00073 Histidine Phosphotransfer domain Alvin_2612 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2612 SM00387 Histidine kinase-like ATPases Alvin_2612 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2612 SM00448 cheY-homologous receiver domain Alvin_2613 SM00448 cheY-homologous receiver domain Alvin_2615 SM01001 AIR carboxylase Alvin_2617 SM00382 ATPases associated with a variety of cellular activities Alvin_2618 SM00448 cheY-homologous receiver domain Alvin_2618 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_2619 SM00331 Sigma factor PP2C-like phosphatases Alvin_2619 SM00448 cheY-homologous receiver domain Alvin_2621 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_2621 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2621 SM00091 PAS domain Alvin_2621 SM00387 Histidine kinase-like ATPases Alvin_2621 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2621 SM00448 cheY-homologous receiver domain Alvin_2622 SM00052 Putative diguanylate phosphodiesterase Alvin_2622 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2622 SM00091 PAS domain Alvin_2622 SM00267 diguanylate cyclase Alvin_2632 SM00989 Alvin_2632 Alvin_2633 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_2644 SM00091 PAS domain Alvin_2648 SM00327 von Willebrand factor (vWF) type A domain Alvin_2649 SM00382 ATPases associated with a variety of cellular activities Alvin_2654 SM00245 tail specific protease Alvin_2658 SM00954 Region found in RelA / SpoT proteins Alvin_2662 SM00464 Found in ATP-dependent protease La (LON) Alvin_2666 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2666 SM00091 PAS domain Alvin_2666 SM00387 Histidine kinase-like ATPases Alvin_2666 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2666 SM00448 cheY-homologous receiver domain Alvin_2669 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Alvin_2671 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_2671 SM00382 ATPases associated with a variety of cellular activities Alvin_2672 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2672 SM00091 PAS domain Alvin_2672 SM00387 Histidine kinase-like ATPases Alvin_2677 SM00900 Alvin_2677 Alvin_2682 SM00116 Domain in cystathionine beta-synthase and other proteins. Alvin_2682 SM01091 Transporter associated domain Alvin_2685 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_2690 SM00095 Transthyretin Alvin_2695 SM00327 von Willebrand factor (vWF) type A domain Alvin_2696 SM00327 von Willebrand factor (vWF) type A domain Alvin_2697 SM00028 Tetratricopeptide repeats Alvin_2702 SM00855 Phosphoglycerate mutase family Alvin_2708 SM00116 Domain in cystathionine beta-synthase and other proteins. Alvin_2708 SM01240 Alvin_2708 Alvin_2711 SM00382 ATPases associated with a variety of cellular activities Alvin_2716 SM00563 Phosphate acyltransferases Alvin_2719 SM00028 Tetratricopeptide repeats Alvin_2725 SM00642 Alpha-amylase domain Alvin_2730 SM00382 ATPases associated with a variety of cellular activities Alvin_2743 SM00877 Alvin_2743 Alvin_2744 SM00877 Alvin_2744 Alvin_2749 SM00961 Ribulose bisphosphate carboxylase, small chain Alvin_2751 SM00961 Ribulose bisphosphate carboxylase, small chain Alvin_2767 SM00487 DEAD-like helicases superfamily Alvin_2767 SM00490 helicase superfamily c-terminal domain Alvin_2768 SM00360 RNA recognition motif Alvin_2776 SM00327 von Willebrand factor (vWF) type A domain Alvin_2778 SM00880 Alvin_2778 Alvin_2779 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2779 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2782 SM00530 Helix-turn-helix XRE-family like proteins Alvin_2785 SM00382 ATPases associated with a variety of cellular activities Alvin_2789 SM00845 GatB domain Alvin_2796 SM00530 Helix-turn-helix XRE-family like proteins Alvin_2802 SM00387 Histidine kinase-like ATPases Alvin_2802 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2803 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2803 SM00091 PAS domain Alvin_2803 SM00448 cheY-homologous receiver domain Alvin_2804 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Alvin_2805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2820 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_2827 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2827 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2841 SM00382 ATPases associated with a variety of cellular activities Alvin_2842 SM00116 Domain in cystathionine beta-synthase and other proteins. Alvin_2846 SM00382 ATPases associated with a variety of cellular activities Alvin_2855 SM00116 Domain in cystathionine beta-synthase and other proteins. Alvin_2855 SM00924 MgtE intracellular N domain Alvin_2864 SM00936 Penicillin-binding protein 5, C-terminal domain Alvin_2870 SM00062 Bacterial periplasmic substrate-binding proteins Alvin_2871 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2871 SM00091 PAS domain Alvin_2871 SM00387 Histidine kinase-like ATPases Alvin_2871 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2872 SM00014 Acid phosphatase homologues Alvin_2874 SM00062 Bacterial periplasmic substrate-binding proteins Alvin_2874 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2874 SM00091 PAS domain Alvin_2874 SM00387 Histidine kinase-like ATPases Alvin_2874 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2874 SM00448 cheY-homologous receiver domain Alvin_2875 SM00448 cheY-homologous receiver domain Alvin_2875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_2881 SM00052 Putative diguanylate phosphodiesterase Alvin_2881 SM00091 PAS domain Alvin_2881 SM00267 diguanylate cyclase Alvin_2882 SM00138 Methyltransferase, chemotaxis proteins Alvin_2889 SM00382 ATPases associated with a variety of cellular activities Alvin_2889 SM00962 SRP54-type protein, GTPase domain Alvin_2889 SM00963 SRP54-type protein, helical bundle domain Alvin_2890 SM00382 ATPases associated with a variety of cellular activities Alvin_2893 SM01152 Alvin_2893 Alvin_2905 SM01011 Aminopeptidase P, N-terminal domain Alvin_2912 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Alvin_2912 SM00091 PAS domain Alvin_2912 SM00387 Histidine kinase-like ATPases Alvin_2912 SM00388 His Kinase A (phosphoacceptor) domain Alvin_2915 SM00260 Two component signalling adaptor domain Alvin_2918 SM00448 cheY-homologous receiver domain Alvin_2919 SM00073 Histidine Phosphotransfer domain Alvin_2919 SM00260 Two component signalling adaptor domain Alvin_2919 SM00387 Histidine kinase-like ATPases Alvin_2919 SM01231 Alvin_2919 Alvin_2921 SM00448 cheY-homologous receiver domain Alvin_2924 SM00382 ATPases associated with a variety of cellular activities Alvin_2924 SM00962 SRP54-type protein, GTPase domain Alvin_2939 SM00382 ATPases associated with a variety of cellular activities Alvin_2944 SM00382 ATPases associated with a variety of cellular activities Alvin_2959 SM00917 LeuA allosteric (dimerisation) domain Alvin_2966 SM00267 diguanylate cyclase Alvin_2967 SM00838 Elongation factor G C-terminus Alvin_2967 SM00889 Elongation factor G, domain IV Alvin_2972 SM00382 ATPases associated with a variety of cellular activities Alvin_2973 SM00116 Domain in cystathionine beta-synthase and other proteins. Alvin_2978 SM00382 ATPases associated with a variety of cellular activities Alvin_2978 SM01086 C-terminal, D2-small domain, of ClpB protein Alvin_2981 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Alvin_2981 SM00954 Region found in RelA / SpoT proteins Alvin_2982 SM01409 Alvin_2982 Alvin_2983 SM00072 Guanylate kinase homologues. Alvin_2985 SM00220 Serine/Threonine protein kinases, catalytic domain Alvin_2994 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_2994 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_2997 SM00382 ATPases associated with a variety of cellular activities Alvin_2997 SM00448 cheY-homologous receiver domain Alvin_2998 SM00091 PAS domain Alvin_2998 SM00387 Histidine kinase-like ATPases Alvin_2998 SM00388 His Kinase A (phosphoacceptor) domain Alvin_3000 SM01230 Alvin_3000 Alvin_3003 SM00836 DALR anticodon binding domain Alvin_3005 SM00563 Phosphate acyltransferases Alvin_3020 SM00327 von Willebrand factor (vWF) type A domain Alvin_3022 SM00382 ATPases associated with a variety of cellular activities Alvin_3025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Alvin_3025 SM00245 tail specific protease Alvin_3027 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Alvin_3028 SM00450 Rhodanese Homology Domain Alvin_3046 SM00487 DEAD-like helicases superfamily Alvin_3046 SM00490 helicase superfamily c-terminal domain Alvin_3048 SM00316 Ribosomal protein S1-like RNA-binding domain Alvin_3049 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_3051 SM00919 Malic enzyme, NAD binding domain Alvin_3051 SM01274 Alvin_3051 Alvin_3054 SM00842 Cell division protein FtsA Alvin_3058 SM00965 Secretin and TonB N terminus short domain Alvin_3066 SM00052 Putative diguanylate phosphodiesterase Alvin_3066 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Alvin_3066 SM00267 diguanylate cyclase Alvin_3068 SM01004 Delta-aminolevulinic acid dehydratase Alvin_3071 SM00100 Cyclic nucleotide-monophosphate binding domain Alvin_3071 SM00419 helix_turn_helix, cAMP Regulatory protein Alvin_3075 SM01228 Alvin_3075 Alvin_3076 SM00382 ATPases associated with a variety of cellular activities Alvin_3077 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Alvin_3077 SM01232 Alvin_3077 Alvin_3081 SM00382 ATPases associated with a variety of cellular activities Alvin_3083 SM00460 Transglutaminase/protease-like homologues Alvin_3084 SM00387 Histidine kinase-like ATPases Alvin_3084 SM00388 His Kinase A (phosphoacceptor) domain Alvin_3084 SM00448 cheY-homologous receiver domain Alvin_3087 SM00829 Enoylreductase Alvin_3108 SM00052 Putative diguanylate phosphodiesterase Alvin_3108 SM00091 PAS domain Alvin_3108 SM00267 diguanylate cyclase Alvin_3112 SM00507 HNH nucleases Alvin_3113 SM00487 DEAD-like helicases superfamily Alvin_3113 SM00490 helicase superfamily c-terminal domain Alvin_3114 SM00836 DALR anticodon binding domain Alvin_3114 SM01016 Arginyl tRNA synthetase N terminal dom Alvin_3117 SM00899 Alvin_3117 Alvin_3124 SM01234 Alvin_3124 Alvin_3135 SM00729 Elongator protein 3, MiaB family, Radical SAM Alvin_3147 SM00528 Domain in histone-like proteins of HNS family Alvin_3149 SM00530 Helix-turn-helix XRE-family like proteins Alvin_3150 SM00477 DNA/RNA non-specific endonuclease Alvin_3150 SM00892 DNA/RNA non-specific endonuclease Alvin_3168 SM00945 ProQ/FINO family Alvin_3175 SM00487 DEAD-like helicases superfamily Alvin_3175 SM00490 helicase superfamily c-terminal domain Alvin_3179 SM00487 DEAD-like helicases superfamily Alvin_3179 SM00490 helicase superfamily c-terminal domain Alvin_3191 SM00530 Helix-turn-helix XRE-family like proteins Alvin_3200 SM00530 Helix-turn-helix XRE-family like proteins Alvin_3206 SM00382 ATPases associated with a variety of cellular activities Alvin_3210 SM00530 Helix-turn-helix XRE-family like proteins Alvin_3213 SM00382 ATPases associated with a variety of cellular activities Alvin_3240 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Alvin_3240 SM00382 ATPases associated with a variety of cellular activities Alvin_3243 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Alvin_3243 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Alvin_3266 SM00487 DEAD-like helicases superfamily Alvin_3267 SM00411 bacterial (prokaryotic) histone like domain Alvin_3277 SM00382 ATPases associated with a variety of cellular activities Alvin_3280 SM00327 von Willebrand factor (vWF) type A domain Alvin_3293 SM00857 Resolvase, N terminal domain