SD28_00005	SSF55486	Metalloproteases ("zincins"), catalytic domain
SD28_00010	SSF52980	Restriction endonuclease-like
SD28_00020	SSF48403	Ankyrin repeat
SD28_00025	SSF51246	Rudiment single hybrid motif
SD28_00025	SSF52440	PreATP-grasp domain
SD28_00025	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_00030	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
SD28_00035	SSF53328	Formyltransferase
SD28_00040	SSF51246	Rudiment single hybrid motif
SD28_00040	SSF52440	PreATP-grasp domain
SD28_00040	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_00040	SSF56104	SAICAR synthase-like
SD28_00045	SSF55326	PurM N-terminal domain-like
SD28_00045	SSF56042	PurM C-terminal domain-like
SD28_00050	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_00050	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
SD28_00055	SSF54523	Pili subunits
SD28_00060	SSF54523	Pili subunits
SD28_00065	SSF51182	RmlC-like cupins
SD28_00070	SSF49329	Cu,Zn superoxide dismutase-like
SD28_00075	SSF103263	Chorismate synthase, AroC
SD28_00090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00090	SSF54211	Ribosomal protein S5 domain 2-like
SD28_00100	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SD28_00100	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_00105	SSF46785	"Winged helix" DNA-binding domain
SD28_00110	SSF55008	HMA, heavy metal-associated domain
SD28_00110	SSF56784	HAD-like
SD28_00110	SSF81653	Calcium ATPase, transduction domain A
SD28_00110	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
SD28_00110	SSF81665	Calcium ATPase, transmembrane domain M
SD28_00115	SSF46785	"Winged helix" DNA-binding domain
SD28_00115	SSF53850	Periplasmic binding protein-like II
SD28_00120	SSF140478	LemA-like
SD28_00135	SSF54211	Ribosomal protein S5 domain 2-like
SD28_00135	SSF55666	Ribonuclease PH domain 2-like
SD28_00140	SSF64288	Chorismate lyase-like
SD28_00175	SSF102114	Radical SAM enzymes
SD28_00180	SSF103088	OmpA-like
SD28_00190	SSF52964	TolB, N-terminal domain
SD28_00190	SSF69304	Tricorn protease N-terminal domain
SD28_00220	SSF55298	YjgF-like
SD28_00230	SSF54534	FKBP-like
SD28_00235	SSF50978	WD40 repeat-like
SD28_00245	SSF103088	OmpA-like
SD28_00250	SSF102405	MCP/YpsA-like
SD28_00260	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_00290	SSF55909	Pentein
SD28_00295	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_00300	SSF75620	Release factor
SD28_00305	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_00305	SSF69075	Glutamyl tRNA-reductase dimerization domain
SD28_00305	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
SD28_00310	SSF48452	TPR-like
SD28_00315	SSF50998	Quinoprotein alcohol dehydrogenase-like
SD28_00320	SSF103473	MFS general substrate transporter
SD28_00325	SSF54211	Ribosomal protein S5 domain 2-like
SD28_00325	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SD28_00325	SSF56719	Type II DNA topoisomerase
SD28_00335	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
SD28_00340	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
SD28_00345	SSF47364	Domain of the SRP/SRP receptor G-proteins
SD28_00345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00355	SSF50447	Translation proteins
SD28_00355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00355	SSF54980	EF-G C-terminal domain-like
SD28_00360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00370	SSF51569	Aldolase
SD28_00375	SSF143856	DeoB insert domain-like
SD28_00375	SSF53649	Alkaline phosphatase-like
SD28_00380	SSF53067	Actin-like ATPase domain
SD28_00385	SSF47807	5' to 3' exonuclease, C-terminal subdomain
SD28_00385	SSF53098	Ribonuclease H-like
SD28_00385	SSF56672	DNA/RNA polymerases
SD28_00385	SSF88723	PIN domain-like
SD28_00390	SSF51120	beta-Roll
SD28_00390	SSF53474	alpha/beta-Hydrolases
SD28_00400	SSF52980	Restriction endonuclease-like
SD28_00410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00415	SSF90123	ABC transporter transmembrane region
SD28_00420	SSF81301	Nucleotidyltransferase
SD28_00420	SSF81891	Poly A polymerase C-terminal region-like
SD28_00425	SSF158442	DsbB-like
SD28_00430	SSF111369	HlyD-like secretion proteins
SD28_00435	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SD28_00435	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SD28_00435	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SD28_00455	SSF103481	Multidrug resistance efflux transporter EmrE
SD28_00460	SSF103473	MFS general substrate transporter
SD28_00470	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_00480	SSF47384	Homodimeric domain of signal transducing histidine kinase
SD28_00480	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SD28_00485	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_00500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00505	SSF52016	LeuD/IlvD-like
SD28_00505	SSF53732	Aconitase iron-sulfur domain
SD28_00510	SSF54909	Dimeric alpha+beta barrel
SD28_00520	SSF102114	Radical SAM enzymes
SD28_00530	SSF52833	Thioredoxin-like
SD28_00535	SSF55811	Nudix
SD28_00540	SSF117457	FumA C-terminal domain-like
SD28_00560	SSF50249	Nucleic acid-binding proteins
SD28_00560	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00570	SSF143800	L28p-like
SD28_00575	SSF57829	Zn-binding ribosomal proteins
SD28_00580	SSF63848	Cell-division inhibitor MinC, C-terminal domain
SD28_00585	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00590	SSF55229	Cell division protein MinE topological specificity domain
SD28_00595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00615	SSF54368	Glutamine synthetase, N-terminal domain
SD28_00615	SSF55931	Glutamine synthetase/guanido kinase
SD28_00620	SSF48403	Ankyrin repeat
SD28_00620	SSF56601	beta-lactamase/transpeptidase-like
SD28_00625	SSF48019	post-AAA+ oligomerization domain-like
SD28_00625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00630	SSF50814	Lipocalins
SD28_00640	SSF52047	RNI-like
SD28_00650	SSF52047	RNI-like
SD28_00655	SSF82657	BolA-like
SD28_00660	SSF52091	SpoIIaa-like
SD28_00675	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
SD28_00675	SSF52374	Nucleotidylyl transferase
SD28_00680	SSF50978	WD40 repeat-like
SD28_00685	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
SD28_00685	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
SD28_00690	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
SD28_00690	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
SD28_00690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00695	SSF52943	ATP synthase (F1-ATPase), gamma subunit
SD28_00700	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
SD28_00700	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
SD28_00700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00705	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
SD28_00710	SSF81573	F1F0 ATP synthase subunit B, membrane domain
SD28_00715	SSF81333	F1F0 ATP synthase subunit C
SD28_00720	SSF81336	F1F0 ATP synthase subunit A
SD28_00730	SSF103473	MFS general substrate transporter
SD28_00735	SSF55120	Pseudouridine synthase
SD28_00735	SSF55174	Alpha-L RNA-binding motif
SD28_00740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00745	SSF103473	MFS general substrate transporter
SD28_00750	SSF52954	Class II aaRS ABD-related
SD28_00750	SSF55681	Class II aaRS and biotin synthetases
SD28_00755	SSF89919	Ribosome-binding factor A, RbfA
SD28_00760	SSF46955	Putative DNA-binding domain
SD28_00760	SSF50447	Translation proteins
SD28_00760	SSF52156	Initiation factor IF2/eIF5b, domain 3
SD28_00760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00765	SSF47794	Rad51 N-terminal domain-like
SD28_00765	SSF50249	Nucleic acid-binding proteins
SD28_00765	SSF54814	Prokaryotic type KH domain (KH-domain type II)
SD28_00765	SSF69705	Transcription factor NusA, N-terminal domain
SD28_00770	SSF74942	YhbC-like, C-terminal domain
SD28_00770	SSF75420	YhbC-like, N-terminal domain
SD28_00780	SSF51726	UROD/MetE-like
SD28_00785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00785	SSF54211	Ribosomal protein S5 domain 2-like
SD28_00810	SSF81452	Cytochrome c oxidase subunit III-like
SD28_00815	SSF81442	Cytochrome c oxidase subunit I-like
SD28_00820	SSF49503	Cupredoxins
SD28_00820	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
SD28_00835	SSF51351	Triosephosphate isomerase (TIM)
SD28_00840	SSF53738	Phosphoglucomutase, first 3 domains
SD28_00840	SSF55957	Phosphoglucomutase, C-terminal domain
SD28_00845	SSF53271	PRTase-like
SD28_00850	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
SD28_00850	SSF51230	Single hybrid motif
SD28_00850	SSF52777	CoA-dependent acyltransferases
SD28_00855	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SD28_00860	SSF46548	alpha-helical ferredoxin
SD28_00860	SSF54292	2Fe-2S ferredoxin-like
SD28_00865	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
SD28_00865	SSF51905	FAD/NAD(P)-binding domain
SD28_00865	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
SD28_00870	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
SD28_00875	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
SD28_00880	SSF48256	Citrate synthase
SD28_00885	SSF103473	MFS general substrate transporter
SD28_00890	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
SD28_00890	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
SD28_00895	SSF52833	Thioredoxin-like
SD28_00900	SSF51445	(Trans)glycosidases
SD28_00905	SSF50249	Nucleic acid-binding proteins
SD28_00905	SSF55681	Class II aaRS and biotin synthetases
SD28_00910	SSF75620	Release factor
SD28_00915	SSF55469	FMN-dependent nitroreductase-like
SD28_00920	SSF46785	"Winged helix" DNA-binding domain
SD28_00945	SSF50891	Cyclophilin-like
SD28_00950	SSF88713	Glycoside hydrolase/deacetylase
SD28_00955	SSF50891	Cyclophilin-like
SD28_00960	SSF103473	MFS general substrate transporter
SD28_00965	SSF52402	Adenine nucleotide alpha hydrolases-like
SD28_00970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_00970	SSF54980	EF-G C-terminal domain-like
SD28_00975	SSF52402	Adenine nucleotide alpha hydrolases-like
SD28_00985	SSF56420	Peptide deformylase
SD28_00990	SSF52121	Lumazine synthase
SD28_00995	SSF142695	RibA-like
SD28_00995	SSF55821	YrdC/RibB
SD28_01000	SSF63380	Riboflavin synthase domain-like
SD28_01005	SSF53597	Dihydrofolate reductase-like
SD28_01005	SSF53927	Cytidine deaminase-like
SD28_01010	SSF46785	"Winged helix" DNA-binding domain
SD28_01015	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_01015	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
SD28_01020	SSF51984	MurCD N-terminal domain
SD28_01020	SSF53244	MurD-like peptide ligases, peptide-binding domain
SD28_01020	SSF53623	MurD-like peptide ligases, catalytic domain
SD28_01025	SSF53790	Tetrapyrrole methylase
SD28_01030	SSF56784	HAD-like
SD28_01035	SSF50985	RCC1/BLIP-II
SD28_01040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01040	SSF56024	Phospholipase D/nuclease
SD28_01045	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
SD28_01045	SSF75138	HprK N-terminal domain-like
SD28_01050	SSF53067	Actin-like ATPase domain
SD28_01055	SSF50249	Nucleic acid-binding proteins
SD28_01070	SSF54611	SecB-like
SD28_01075	SSF52821	Rhodanese/Cell cycle control phosphatase
SD28_01080	SSF111384	OmpH-like
SD28_01085	SSF52096	ClpP/crotonase
SD28_01090	SSF52833	Thioredoxin-like
SD28_01125	SSF54001	Cysteine proteinases
SD28_01130	SSF57903	FYVE/PHD zinc finger
SD28_01135	SSF51366	Ribulose-phoshate binding barrel
SD28_01140	SSF51338	Composite domain of metallo-dependent hydrolases
SD28_01140	SSF51556	Metallo-dependent hydrolases
SD28_01150	SSF51366	Ribulose-phoshate binding barrel
SD28_01155	SSF51395	FMN-linked oxidoreductases
SD28_01235	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SD28_01235	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_01240	SSF69500	DTD-like
SD28_01255	SSF54862	4Fe-4S ferredoxins
SD28_01260	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
SD28_01265	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
SD28_01270	SSF56219	DNase I-like
SD28_01280	SSF103473	MFS general substrate transporter
SD28_01290	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_01290	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
SD28_01295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01305	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
SD28_01305	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
SD28_01310	SSF52317	Class I glutamine amidotransferase-like
SD28_01315	SSF56322	ADC synthase
SD28_01330	SSF50249	Nucleic acid-binding proteins
SD28_01335	SSF48295	TrpR-like
SD28_01335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01340	SSF55979	DNA clamp
SD28_01345	SSF51055	Carbohydrate binding domain
SD28_01345	SSF51445	(Trans)glycosidases
SD28_01355	SSF53671	Aspartate/ornithine carbamoyltransferase
SD28_01360	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
SD28_01360	SSF52335	Methylglyoxal synthase-like
SD28_01360	SSF52440	PreATP-grasp domain
SD28_01360	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_01365	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
SD28_01365	SSF52317	Class I glutamine amidotransferase-like
SD28_01370	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SD28_01375	SSF52266	SGNH hydrolase
SD28_01380	SSF50249	Nucleic acid-binding proteins
SD28_01385	SSF53474	alpha/beta-Hydrolases
SD28_01390	SSF53850	Periplasmic binding protein-like II
SD28_01390	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
SD28_01405	SSF161098	MetI-like
SD28_01410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01420	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_01425	SSF51161	Trimeric LpxA-like enzymes
SD28_01430	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
SD28_01435	SSF54211	Ribosomal protein S5 domain 2-like
SD28_01435	SSF55060	GHMP Kinase, C-terminal domain
SD28_01445	SSF53187	Zn-dependent exopeptidases
SD28_01455	SSF69786	YggU-like
SD28_01460	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SD28_01465	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_01545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01545	SSF82051	Obg GTP-binding protein N-terminal domain
SD28_01555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01555	SSF90123	ABC transporter transmembrane region
SD28_01560	SSF50249	Nucleic acid-binding proteins
SD28_01560	SSF55261	GAD domain-like
SD28_01560	SSF55681	Class II aaRS and biotin synthetases
SD28_01565	SSF51445	(Trans)glycosidases
SD28_01570	SSF53098	Ribonuclease H-like
SD28_01575	SSF51621	Phosphoenolpyruvate/pyruvate domain
SD28_01575	SSF52009	Phosphohistidine domain
SD28_01575	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_01580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01585	SSF53098	Ribonuclease H-like
SD28_01590	SSF50104	Translation proteins SH3-like domain
SD28_01590	SSF50249	Nucleic acid-binding proteins
SD28_01595	SSF54523	Pili subunits
SD28_01615	SSF54211	Ribosomal protein S5 domain 2-like
SD28_01630	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_01635	SSF51419	PLP-binding barrel
SD28_01645	SSF53697	SIS domain
SD28_01655	SSF46992	Ribosomal protein S20
SD28_01660	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
SD28_01665	SSF51366	Ribulose-phoshate binding barrel
SD28_01675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01675	SSF81923	Double Clp-N motif
SD28_01700	SSF75011	3-carboxy-cis,cis-mucoante lactonizing enzyme
SD28_01705	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
SD28_01715	SSF55821	YrdC/RibB
SD28_01720	SSF50249	Nucleic acid-binding proteins
SD28_01725	SSF53927	Cytidine deaminase-like
SD28_01730	SSF52440	PreATP-grasp domain
SD28_01730	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_01740	SSF53067	Actin-like ATPase domain
SD28_01745	SSF52490	Tubulin nucleotide-binding domain-like
SD28_01745	SSF55307	Tubulin C-terminal domain-like
SD28_01750	SSF54211	Ribosomal protein S5 domain 2-like
SD28_01755	SSF48019	post-AAA+ oligomerization domain-like
SD28_01755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01760	SSF51445	(Trans)glycosidases
SD28_01765	SSF53955	Lysozyme-like
SD28_01775	SSF103473	MFS general substrate transporter
SD28_01795	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_01800	SSF56954	Outer membrane efflux proteins (OEP)
SD28_01805	SSF56214	4'-phosphopantetheinyl transferase
SD28_01810	SSF53271	PRTase-like
SD28_01810	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SD28_01815	SSF109736	FGAM synthase PurL, linker domain
SD28_01815	SSF52317	Class I glutamine amidotransferase-like
SD28_01815	SSF55326	PurM N-terminal domain-like
SD28_01815	SSF56042	PurM C-terminal domain-like
SD28_01815	SSF82697	PurS-like
SD28_01820	SSF48557	L-aspartase-like
SD28_01825	SSF90123	ABC transporter transmembrane region
SD28_01830	SSF111369	HlyD-like secretion proteins
SD28_01835	SSF141000	Glu-tRNAGln amidotransferase C subunit
SD28_01840	SSF75304	Amidase signature (AS) enzymes
SD28_01845	SSF55931	Glutamine synthetase/guanido kinase
SD28_01845	SSF89095	GatB/YqeY motif
SD28_01855	SSF103473	MFS general substrate transporter
SD28_01865	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SD28_01870	SSF51905	FAD/NAD(P)-binding domain
SD28_01880	SSF53383	PLP-dependent transferases
SD28_01885	SSF53383	PLP-dependent transferases
SD28_01890	SSF53633	Carbamate kinase-like
SD28_01895	SSF46785	"Winged helix" DNA-binding domain
SD28_01940	SSF143011	RelE-like
SD28_01945	SSF143120	YefM-like
SD28_01950	SSF56672	DNA/RNA polymerases
SD28_01955	SSF56672	DNA/RNA polymerases
SD28_01960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_01960	SSF57850	RING/U-box
SD28_01970	SSF56770	HydA/Nqo6-like
SD28_01975	SSF143243	Nqo5-like
SD28_01980	SSF56762	HydB/Nqo4-like
SD28_01985	SSF52833	Thioredoxin-like
SD28_01990	SSF140490	Nqo1C-terminal domain-like
SD28_01990	SSF142019	Nqo1 FMN-binding domain-like
SD28_01990	SSF142984	Nqo1 middle domain-like
SD28_01995	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
SD28_01995	SSF54292	2Fe-2S ferredoxin-like
SD28_01995	SSF54862	4Fe-4S ferredoxins
SD28_02005	SSF54862	4Fe-4S ferredoxins
SD28_02045	SSF51161	Trimeric LpxA-like enzymes
SD28_02055	SSF53613	Ribokinase-like
SD28_02065	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02070	SSF53300	vWA-like
SD28_02080	SSF53300	vWA-like
SD28_02085	SSF53300	vWA-like
SD28_02090	SSF48452	TPR-like
SD28_02105	SSF102400	DNA polymerase III chi subunit
SD28_02115	SSF46589	tRNA-binding arm
SD28_02115	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SD28_02115	SSF50677	ValRS/IleRS/LeuRS editing domain
SD28_02115	SSF52374	Nucleotidylyl transferase
SD28_02130	SSF52335	Methylglyoxal synthase-like
SD28_02130	SSF53927	Cytidine deaminase-like
SD28_02140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02145	SSF53271	PRTase-like
SD28_02155	SSF51905	FAD/NAD(P)-binding domain
SD28_02160	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
SD28_02165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02170	SSF53807	"Helical backbone" metal receptor
SD28_02175	SSF103473	MFS general substrate transporter
SD28_02185	SSF52218	Flavoproteins
SD28_02200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02210	SSF52788	Phosphotyrosine protein phosphatases I
SD28_02235	SSF103473	MFS general substrate transporter
SD28_02240	SSF53597	Dihydrofolate reductase-like
SD28_02245	SSF117289	Nucleoporin domain
SD28_02250	SSF52313	Ribosomal protein S2
SD28_02255	SSF46934	UBA-like
SD28_02255	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
SD28_02260	SSF53633	Carbamate kinase-like
SD28_02265	SSF55194	Ribosome recycling factor, RRF
SD28_02270	SSF64005	Undecaprenyl diphosphate synthase
SD28_02280	SSF51283	dUTPase-like
SD28_02290	SSF50249	Nucleic acid-binding proteins
SD28_02295	SSF47973	Ribosomal protein S7
SD28_02300	SSF50447	Translation proteins
SD28_02300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02300	SSF54211	Ribosomal protein S5 domain 2-like
SD28_02300	SSF54980	EF-G C-terminal domain-like
SD28_02305	SSF54999	Ribosomal protein S10
SD28_02310	SSF50447	Translation proteins
SD28_02315	SSF52166	Ribosomal protein L4
SD28_02320	SSF54189	Ribosomal proteins S24e, L23 and L15e
SD28_02325	SSF50104	Translation proteins SH3-like domain
SD28_02325	SSF50249	Nucleic acid-binding proteins
SD28_02330	SSF54570	Ribosomal protein S19
SD28_02335	SSF54843	Ribosomal protein L22
SD28_02340	SSF54814	Prokaryotic type KH domain (KH-domain type II)
SD28_02340	SSF54821	Ribosomal protein S3 C-terminal domain
SD28_02345	SSF54686	Ribosomal protein L16p/L10e
SD28_02350	SSF46561	Ribosomal protein L29 (L29p)
SD28_02355	SSF50249	Nucleic acid-binding proteins
SD28_02360	SSF50193	Ribosomal protein L14
SD28_02365	SSF50104	Translation proteins SH3-like domain
SD28_02370	SSF55282	RL5-like
SD28_02375	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
SD28_02380	SSF56047	Ribosomal protein S8
SD28_02385	SSF56053	Ribosomal protein L6
SD28_02390	SSF53137	Translational machinery components
SD28_02395	SSF54211	Ribosomal protein S5 domain 2-like
SD28_02395	SSF54768	dsRNA-binding domain-like
SD28_02400	SSF55129	Ribosomal protein L30p/L7e
SD28_02405	SSF52080	Ribosomal proteins L15p and L18e
SD28_02410	SSF103491	Preprotein translocase SecY subunit
SD28_02415	SSF57840	Ribosomal protein L36
SD28_02420	SSF46946	S13-like H2TH domain
SD28_02425	SSF53137	Translational machinery components
SD28_02430	SSF55174	Alpha-L RNA-binding motif
SD28_02435	SSF47789	C-terminal domain of RNA polymerase alpha subunit
SD28_02435	SSF55257	RBP11-like subunits of RNA polymerase
SD28_02435	SSF56553	Insert subdomain of RNA polymerase alpha subunit
SD28_02440	SSF64263	Prokaryotic ribosomal protein L17
SD28_02445	SSF110942	HSP90 C-terminal domain
SD28_02445	SSF54211	Ribosomal protein S5 domain 2-like
SD28_02445	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SD28_02450	SSF52317	Class I glutamine amidotransferase-like
SD28_02450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02455	SSF54919	Nucleoside diphosphate kinase, NDK
SD28_02460	SSF52096	ClpP/crotonase
SD28_02465	SSF53244	MurD-like peptide ligases, peptide-binding domain
SD28_02465	SSF53623	MurD-like peptide ligases, catalytic domain
SD28_02470	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02475	SSF81901	HCP-like
SD28_02485	SSF55931	Glutamine synthetase/guanido kinase
SD28_02490	SSF143800	L28p-like
SD28_02495	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
SD28_02495	SSF63380	Riboflavin synthase domain-like
SD28_02500	SSF141066	ICP-like
SD28_02505	SSF117892	Band 7/SPFH domain
SD28_02515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02520	SSF103473	MFS general substrate transporter
SD28_02525	SSF53067	Actin-like ATPase domain
SD28_02530	SSF51905	FAD/NAD(P)-binding domain
SD28_02535	SSF81338	Aquaporin-like
SD28_02545	SSF50182	Sm-like ribonucleoproteins
SD28_02545	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
SD28_02565	SSF50447	Translation proteins
SD28_02565	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
SD28_02565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02580	SSF50104	Translation proteins SH3-like domain
SD28_02580	SSF82679	N-utilization substance G protein NusG, N-terminal domain
SD28_02585	SSF46906	Ribosomal protein L11, C-terminal domain
SD28_02585	SSF54747	Ribosomal L11/L12e N-terminal domain
SD28_02590	SSF56808	Ribosomal protein L1
SD28_02595	SSF160369	Ribosomal protein L10-like
SD28_02600	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
SD28_02600	SSF54736	ClpS-like
SD28_02605	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
SD28_02610	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
SD28_02620	SSF53067	Actin-like ATPase domain
SD28_02630	SSF55973	S-adenosylmethionine synthetase
SD28_02635	SSF54565	Ribosomal protein S16
SD28_02640	SSF50346	PRC-barrel domain
SD28_02640	SSF50447	Translation proteins
SD28_02650	SSF50104	Translation proteins SH3-like domain
SD28_02655	SSF56349	DNA breaking-rejoining enzymes
SD28_02660	SSF51197	Clavaminate synthase-like
SD28_02665	SSF55811	Nudix
SD28_02690	SSF51905	FAD/NAD(P)-binding domain
SD28_02690	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
SD28_02700	SSF51055	Carbohydrate binding domain
SD28_02700	SSF51445	(Trans)glycosidases
SD28_02710	SSF48657	FinO-like
SD28_02730	SSF54001	Cysteine proteinases
SD28_02735	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
SD28_02740	SSF46785	"Winged helix" DNA-binding domain
SD28_02740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02745	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
SD28_02750	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_02750	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SD28_02765	SSF53474	alpha/beta-Hydrolases
SD28_02770	SSF56655	Carbohydrate phosphatase
SD28_02780	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_02805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02805	SSF57850	RING/U-box
SD28_02810	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SD28_02810	SSF52374	Nucleotidylyl transferase
SD28_02815	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_02825	SSF53955	Lysozyme-like
SD28_02830	SSF75217	alpha/beta knot
SD28_02860	SSF51556	Metallo-dependent hydrolases
SD28_02870	SSF53850	Periplasmic binding protein-like II
SD28_02875	SSF51182	RmlC-like cupins
SD28_02885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_02895	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_02900	SSF111331	NAD kinase/diacylglycerol kinase-like
SD28_02915	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_02925	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SD28_02930	SSF54001	Cysteine proteinases
SD28_02930	SSF56300	Metallo-dependent phosphatases
SD28_02935	SSF46785	"Winged helix" DNA-binding domain
SD28_02940	SSF52821	Rhodanese/Cell cycle control phosphatase
SD28_02945	SSF56281	Metallo-hydrolase/oxidoreductase
SD28_02950	SSF51197	Clavaminate synthase-like
SD28_02960	SSF48013	NusB-like
SD28_02965	SSF56317	Carbon-nitrogen hydrolase
SD28_02970	SSF53383	PLP-dependent transferases
SD28_02975	SSF52954	Class II aaRS ABD-related
SD28_02975	SSF55681	Class II aaRS and biotin synthetases
SD28_02975	SSF55826	YbaK/ProRS associated domain
SD28_02990	SSF48403	Ankyrin repeat
SD28_03005	SSF82649	SufE/NifU
SD28_03010	SSF69618	HemD-like
SD28_03025	SSF56281	Metallo-hydrolase/oxidoreductase
SD28_03030	SSF110997	Sporulation related repeat
SD28_03035	SSF50037	C-terminal domain of transcriptional repressors
SD28_03060	SSF53098	Ribonuclease H-like
SD28_03095	SSF143011	RelE-like
SD28_03105	SSF47781	RuvA domain 2-like
SD28_03105	SSF50249	Nucleic acid-binding proteins
SD28_03105	SSF52113	BRCT domain
SD28_03105	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
SD28_03110	SSF54001	Cysteine proteinases
SD28_03115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03115	SSF52980	Restriction endonuclease-like
SD28_03130	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_03135	SSF56349	DNA breaking-rejoining enzymes
SD28_03145	SSF54611	SecB-like
SD28_03150	SSF48334	DNA repair protein MutS, domain III
SD28_03150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03150	SSF53150	DNA repair protein MutS, domain II
SD28_03150	SSF55271	DNA repair protein MutS, domain I
SD28_03155	SSF52096	ClpP/crotonase
SD28_03165	SSF54523	Pili subunits
SD28_03175	SSF53697	SIS domain
SD28_03190	SSF52402	Adenine nucleotide alpha hydrolases-like
SD28_03195	SSF52374	Nucleotidylyl transferase
SD28_03210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03215	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_03220	SSF53738	Phosphoglucomutase, first 3 domains
SD28_03220	SSF55957	Phosphoglucomutase, C-terminal domain
SD28_03225	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SD28_03225	SSF52922	TK C-terminal domain-like
SD28_03230	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
SD28_03230	SSF51230	Single hybrid motif
SD28_03230	SSF52777	CoA-dependent acyltransferases
SD28_03235	SSF51905	FAD/NAD(P)-binding domain
SD28_03235	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
SD28_03240	SSF46894	C-terminal effector domain of the bipartite response regulators
SD28_03250	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
SD28_03255	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_03265	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
SD28_03270	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_03275	SSF103481	Multidrug resistance efflux transporter EmrE
SD28_03280	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_03285	SSF103473	MFS general substrate transporter
SD28_03290	SSF53383	PLP-dependent transferases
SD28_03310	SSF89562	RraA-like
SD28_03320	SSF103473	MFS general substrate transporter
SD28_03345	SSF52141	Uracil-DNA glycosylase-like
SD28_03350	SSF101904	GyrA/ParC C-terminal domain-like
SD28_03350	SSF56719	Type II DNA topoisomerase
SD28_03355	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_03355	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SD28_03355	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
SD28_03365	SSF111384	OmpH-like
SD28_03370	SSF51161	Trimeric LpxA-like enzymes
SD28_03375	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SD28_03380	SSF51161	Trimeric LpxA-like enzymes
SD28_03385	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SD28_03390	SSF64383	Cell-division protein ZipA, C-terminal domain
SD28_03395	SSF110395	CutC-like
SD28_03400	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_03400	SSF52210	Succinyl-CoA synthetase domains
SD28_03405	SSF52210	Succinyl-CoA synthetase domains
SD28_03405	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_03415	SSF51395	FMN-linked oxidoreductases
SD28_03425	SSF54211	Ribosomal protein S5 domain 2-like
SD28_03425	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SD28_03425	SSF56719	Type II DNA topoisomerase
SD28_03430	SSF46946	S13-like H2TH domain
SD28_03430	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
SD28_03430	SSF81624	N-terminal domain of MutM-like DNA repair proteins
SD28_03435	SSF56801	Acetyl-CoA synthetase-like
SD28_03440	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_03440	SSF81799	Putative methyltransferase TM0872, insert domain
SD28_03450	SSF56519	Penicillin binding protein dimerisation domain
SD28_03450	SSF56601	beta-lactamase/transpeptidase-like
SD28_03455	SSF47060	S15/NS1 RNA-binding domain
SD28_03460	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
SD28_03460	SSF50249	Nucleic acid-binding proteins
SD28_03460	SSF54211	Ribosomal protein S5 domain 2-like
SD28_03460	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
SD28_03460	SSF55666	Ribonuclease PH domain 2-like
SD28_03465	SSF89360	HesB-like domain
SD28_03470	SSF51569	Aldolase
SD28_03475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03480	SSF63562	RPB6/omega subunit-like
SD28_03490	SSF50249	Nucleic acid-binding proteins
SD28_03490	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_03505	SSF103473	MFS general substrate transporter
SD28_03510	SSF51604	Enolase C-terminal domain-like
SD28_03510	SSF54826	Enolase N-terminal domain-like
SD28_03520	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_03530	SSF50129	GroES-like
SD28_03530	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_03535	SSF53383	PLP-dependent transferases
SD28_03540	SSF51055	Carbohydrate binding domain
SD28_03540	SSF51445	(Trans)glycosidases
SD28_03545	SSF49265	Fibronectin type III
SD28_03545	SSF51055	Carbohydrate binding domain
SD28_03545	SSF51445	(Trans)glycosidases
SD28_03580	SSF48013	NusB-like
SD28_03580	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_03585	SSF56655	Carbohydrate phosphatase
SD28_03595	SSF103473	MFS general substrate transporter
SD28_03615	SSF160246	EspE N-terminal domain-like
SD28_03615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03620	SSF51695	PLC-like phosphodiesterases
SD28_03625	SSF53218	Molybdenum cofactor biosynthesis proteins
SD28_03630	SSF53244	MurD-like peptide ligases, peptide-binding domain
SD28_03630	SSF53623	MurD-like peptide ligases, catalytic domain
SD28_03630	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_03635	SSF53244	MurD-like peptide ligases, peptide-binding domain
SD28_03635	SSF53623	MurD-like peptide ligases, catalytic domain
SD28_03645	SSF69765	IpsF-like
SD28_03650	SSF52821	Rhodanese/Cell cycle control phosphatase
SD28_03655	SSF161098	MetI-like
SD28_03655	SSF53850	Periplasmic binding protein-like II
SD28_03660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03660	SSF55021	ACT-like
SD28_03670	SSF52743	Subtilisin-like
SD28_03680	SSF51713	tRNA-guanine transglycosylase
SD28_03710	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SD28_03715	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
SD28_03725	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
SD28_03725	SSF88946	Sigma2 domain of RNA polymerase sigma factors
SD28_03730	SSF55205	EPT/RTPC-like
SD28_03735	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_03740	SSF53098	Ribonuclease H-like
SD28_03745	SSF53774	Glutaminase/Asparaginase
SD28_03750	SSF53056	beta-carbonic anhydrase, cab
SD28_03760	SSF102735	Trigger factor ribosome-binding domain
SD28_03760	SSF109998	Triger factor/SurA peptide-binding domain-like
SD28_03760	SSF54534	FKBP-like
SD28_03765	SSF52096	ClpP/crotonase
SD28_03770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03770	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
SD28_03775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03775	SSF54211	Ribosomal protein S5 domain 2-like
SD28_03775	SSF88697	PUA domain-like
SD28_03780	SSF47729	IHF-like DNA-binding proteins
SD28_03785	SSF109998	Triger factor/SurA peptide-binding domain-like
SD28_03790	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03810	SSF50182	Sm-like ribonucleoproteins
SD28_03815	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03820	SSF117892	Band 7/SPFH domain
SD28_03825	SSF117892	Band 7/SPFH domain
SD28_03830	SSF52788	Phosphotyrosine protein phosphatases I
SD28_03835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03845	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
SD28_03860	SSF102405	MCP/YpsA-like
SD28_03865	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_03870	SSF53697	SIS domain
SD28_03875	SSF51366	Ribulose-phoshate binding barrel
SD28_03880	SSF51182	RmlC-like cupins
SD28_03880	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_03885	SSF56784	HAD-like
SD28_03890	SSF53613	Ribokinase-like
SD28_03895	SSF52317	Class I glutamine amidotransferase-like
SD28_03900	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SD28_03935	SSF47413	lambda repressor-like DNA-binding domains
SD28_03940	SSF158442	DsbB-like
SD28_03945	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
SD28_03950	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SD28_03955	SSF116878	TrmE connector domain
SD28_03955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_03965	SSF69754	Ribosome binding protein Y (YfiA homologue)
SD28_03970	SSF55804	Phoshotransferase/anion transport protein
SD28_03975	SSF75217	alpha/beta knot
SD28_03980	SSF53098	Ribonuclease H-like
SD28_03985	SSF101738	SspB-like
SD28_03990	SSF52833	Thioredoxin-like
SD28_03995	SSF54211	Ribosomal protein S5 domain 2-like
SD28_04000	SSF52161	Ribosomal protein L13
SD28_04005	SSF51905	FAD/NAD(P)-binding domain
SD28_04010	SSF50685	Barwin-like endoglucanases
SD28_04015	SSF51064	Head domain of nucleotide exchange factor GrpE
SD28_04015	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
SD28_04020	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
SD28_04020	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
SD28_04020	SSF53067	Actin-like ATPase domain
SD28_04025	SSF46565	Chaperone J-domain
SD28_04025	SSF49493	HSP40/DnaJ peptide-binding domain
SD28_04025	SSF57938	DnaJ/Hsp40 cysteine-rich domain
SD28_04030	SSF52172	CheY-like
SD28_04030	SSF55785	PYP-like sensor domain (PAS domain)
SD28_04030	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SD28_04035	SSF53383	PLP-dependent transferases
SD28_04045	SSF52402	Adenine nucleotide alpha hydrolases-like
SD28_04050	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
SD28_04050	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
SD28_04055	SSF56954	Outer membrane efflux proteins (OEP)
SD28_04060	SSF111369	HlyD-like secretion proteins
SD28_04065	SSF103473	MFS general substrate transporter
SD28_04070	SSF56801	Acetyl-CoA synthetase-like
SD28_04075	SSF103473	MFS general substrate transporter
SD28_04080	SSF103473	MFS general substrate transporter
SD28_04085	SSF75217	alpha/beta knot
SD28_04085	SSF88697	PUA domain-like
SD28_04105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04120	SSF55120	Pseudouridine synthase
SD28_04120	SSF55174	Alpha-L RNA-binding motif
SD28_04125	SSF48452	TPR-like
SD28_04130	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_04140	SSF48403	Ankyrin repeat
SD28_04150	SSF56784	HAD-like
SD28_04165	SSF52833	Thioredoxin-like
SD28_04170	SSF50621	Alanine racemase C-terminal domain-like
SD28_04170	SSF51419	PLP-binding barrel
SD28_04180	SSF53850	Periplasmic binding protein-like II
SD28_04180	SSF55021	ACT-like
SD28_04190	SSF143548	Serine metabolism enzymes domain
SD28_04195	SSF53383	PLP-dependent transferases
SD28_04200	SSF89360	HesB-like domain
SD28_04205	SSF117916	Fe-S cluster assembly (FSCA) domain-like
SD28_04210	SSF52374	Nucleotidylyl transferase
SD28_04215	SSF54862	4Fe-4S ferredoxins
SD28_04220	SSF103088	OmpA-like
SD28_04220	SSF56925	OMPA-like
SD28_04225	SSF52954	Class II aaRS ABD-related
SD28_04225	SSF55186	ThrRS/AlaRS common domain
SD28_04225	SSF55681	Class II aaRS and biotin synthetases
SD28_04225	SSF81271	TGS-like
SD28_04230	SSF54364	Translation initiation factor IF3, N-terminal domain
SD28_04230	SSF55200	Translation initiation factor IF3, C-terminal domain
SD28_04235	SSF143034	L35p-like
SD28_04240	SSF74731	Ribosomal protein L20
SD28_04250	SSF100950	NagB/RpiA/CoA transferase-like
SD28_04250	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
SD28_04255	SSF161070	SNF-like
SD28_04265	SSF51905	FAD/NAD(P)-binding domain
SD28_04295	SSF53681	Aspartate/glutamate racemase
SD28_04305	SSF46600	C-terminal UvrC-binding domain of UvrB
SD28_04305	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04310	SSF53098	Ribonuclease H-like
SD28_04320	SSF56784	HAD-like
SD28_04335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04340	SSF56529	FAH
SD28_04345	SSF53167	Purine and uridine phosphorylases
SD28_04345	SSF53474	alpha/beta-Hydrolases
SD28_04350	SSF55120	Pseudouridine synthase
SD28_04355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04360	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SD28_04370	SSF55681	Class II aaRS and biotin synthetases
SD28_04375	SSF52374	Nucleotidylyl transferase
SD28_04375	SSF55174	Alpha-L RNA-binding motif
SD28_04390	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_04400	SSF50486	FMT C-terminal domain-like
SD28_04400	SSF53328	Formyltransferase
SD28_04405	SSF52440	PreATP-grasp domain
SD28_04405	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_04410	SSF53383	PLP-dependent transferases
SD28_04415	SSF53474	alpha/beta-Hydrolases
SD28_04420	SSF51717	Dihydropteroate synthetase-like
SD28_04420	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
SD28_04425	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
SD28_04430	SSF56801	Acetyl-CoA synthetase-like
SD28_04435	SSF56322	ADC synthase
SD28_04435	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
SD28_04440	SSF52317	Class I glutamine amidotransferase-like
SD28_04450	SSF51430	NAD(P)-linked oxidoreductase
SD28_04455	SSF53098	Ribonuclease H-like
SD28_04460	SSF55166	Hedgehog/DD-peptidase
SD28_04470	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_04470	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SD28_04475	SSF53720	ALDH-like
SD28_04490	SSF89095	GatB/YqeY motif
SD28_04495	SSF56731	DNA primase core
SD28_04495	SSF57783	Zinc beta-ribbon
SD28_04500	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
SD28_04500	SSF88946	Sigma2 domain of RNA polymerase sigma factors
SD28_04505	SSF53383	PLP-dependent transferases
SD28_04510	SSF158710	PSPTO4464-like
SD28_04515	SSF48576	Terpenoid synthases
SD28_04545	SSF160240	Cation efflux protein cytoplasmic domain-like
SD28_04545	SSF161111	Cation efflux protein transmembrane domain-like
SD28_04550	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_04555	SSF56801	Acetyl-CoA synthetase-like
SD28_04560	SSF103481	Multidrug resistance efflux transporter EmrE
SD28_04565	SSF52402	Adenine nucleotide alpha hydrolases-like
SD28_04570	SSF64307	SirA-like
SD28_04575	SSF158997	Trm112p-like
SD28_04580	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_04585	SSF54197	HIT-like
SD28_04590	SSF54534	FKBP-like
SD28_04595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04600	SSF53098	Ribonuclease H-like
SD28_04605	SSF51905	FAD/NAD(P)-binding domain
SD28_04610	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_04615	SSF51182	RmlC-like cupins
SD28_04615	SSF52374	Nucleotidylyl transferase
SD28_04620	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SD28_04625	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SD28_04625	SSF69572	Activating enzymes of the ubiquitin-like proteins
SD28_04630	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SD28_04635	SSF103473	MFS general substrate transporter
SD28_04640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04645	SSF46785	"Winged helix" DNA-binding domain
SD28_04645	SSF55681	Class II aaRS and biotin synthetases
SD28_04650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04655	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_04660	SSF53383	PLP-dependent transferases
SD28_04665	SSF102114	Radical SAM enzymes
SD28_04670	SSF53383	PLP-dependent transferases
SD28_04675	SSF52402	Adenine nucleotide alpha hydrolases-like
SD28_04675	SSF56037	PheT/TilS domain
SD28_04675	SSF82829	MesJ substrate recognition domain-like
SD28_04680	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_04680	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
SD28_04680	SSF55021	ACT-like
SD28_04685	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
SD28_04695	SSF50249	Nucleic acid-binding proteins
SD28_04700	SSF53383	PLP-dependent transferases
SD28_04710	SSF50249	Nucleic acid-binding proteins
SD28_04725	SSF82657	BolA-like
SD28_04730	SSF100950	NagB/RpiA/CoA transferase-like
SD28_04735	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04740	SSF51556	Metallo-dependent hydrolases
SD28_04745	SSF109604	HD-domain/PDEase-like
SD28_04750	SSF103473	MFS general substrate transporter
SD28_04755	SSF47819	HRDC-like
SD28_04755	SSF53098	Ribonuclease H-like
SD28_04760	SSF46600	C-terminal UvrC-binding domain of UvrB
SD28_04760	SSF47781	RuvA domain 2-like
SD28_04760	SSF82771	GIY-YIG endonuclease
SD28_04770	SSF53927	Cytidine deaminase-like
SD28_04775	SSF52499	Isochorismatase-like hydrolases
SD28_04785	SSF103481	Multidrug resistance efflux transporter EmrE
SD28_04790	SSF103025	Folate-binding domain
SD28_04795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04800	SSF103473	MFS general substrate transporter
SD28_04805	SSF52821	Rhodanese/Cell cycle control phosphatase
SD28_04810	SSF57667	beta-beta-alpha zinc fingers
SD28_04815	SSF48557	L-aspartase-like
SD28_04820	SSF52091	SpoIIaa-like
SD28_04835	SSF55681	Class II aaRS and biotin synthetases
SD28_04840	SSF117991	YbeD/HP0495-like
SD28_04845	SSF56601	beta-lactamase/transpeptidase-like
SD28_04845	SSF69189	Penicillin-binding protein associated domain
SD28_04850	SSF50324	Inorganic pyrophosphatase
SD28_04865	SSF103473	MFS general substrate transporter
SD28_04875	SSF52402	Adenine nucleotide alpha hydrolases-like
SD28_04880	SSF74982	Small protein B (SmpB)
SD28_04885	SSF55961	Bet v1-like
SD28_04890	SSF54285	MoaD/ThiS
SD28_04895	SSF143422	Transposase IS200-like
SD28_04900	SSF51905	FAD/NAD(P)-binding domain
SD28_04910	SSF50447	Translation proteins
SD28_04910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04910	SSF54980	EF-G C-terminal domain-like
SD28_04915	SSF51569	Aldolase
SD28_04920	SSF47446	Signal peptide-binding domain
SD28_04920	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04935	SSF50249	Nucleic acid-binding proteins
SD28_04940	SSF103473	MFS general substrate transporter
SD28_04945	SSF53187	Zn-dependent exopeptidases
SD28_04950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_04955	SSF55315	L30e-like
SD28_04955	SSF75217	alpha/beta knot
SD28_04960	SSF49764	HSP20-like chaperones
SD28_04965	SSF54631	CBS-domain pair
SD28_04970	SSF46785	"Winged helix" DNA-binding domain
SD28_04970	SSF51206	cAMP-binding domain-like
SD28_04985	SSF46689	Homeodomain-like
SD28_04985	SSF53041	Resolvase-like
SD28_04990	SSF50475	FMN-binding split barrel
SD28_04995	SSF46689	Homeodomain-like
SD28_04995	SSF53098	Ribonuclease H-like
SD28_05000	SSF54001	Cysteine proteinases
SD28_05000	SSF82199	SET domain
SD28_05005	SSF51316	Mss4-like
SD28_05005	SSF55068	Peptide methionine sulfoxide reductase
SD28_05010	SSF103473	MFS general substrate transporter
SD28_05040	SSF54862	4Fe-4S ferredoxins
SD28_05045	SSF81301	Nucleotidyltransferase
SD28_05055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05065	SSF47240	Ferritin-like
SD28_05065	SSF52833	Thioredoxin-like
SD28_05070	SSF52833	Thioredoxin-like
SD28_05075	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
SD28_05075	SSF51998	PFL-like glycyl radical enzymes
SD28_05080	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_05080	SSF56327	LDH C-terminal domain-like
SD28_05090	SSF47240	Ferritin-like
SD28_05095	SSF69572	Activating enzymes of the ubiquitin-like proteins
SD28_05100	SSF52833	Thioredoxin-like
SD28_05110	SSF57783	Zinc beta-ribbon
SD28_05110	SSF82057	Prokaryotic SH3-related domain
SD28_05115	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
SD28_05120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05135	SSF51695	PLC-like phosphodiesterases
SD28_05140	SSF51445	(Trans)glycosidases
SD28_05145	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_05150	SSF160104	Acetoacetate decarboxylase-like
SD28_05160	SSF51556	Metallo-dependent hydrolases
SD28_05170	SSF52317	Class I glutamine amidotransferase-like
SD28_05170	SSF52402	Adenine nucleotide alpha hydrolases-like
SD28_05170	SSF54810	GMP synthetase C-terminal dimerisation domain
SD28_05175	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SD28_05175	SSF52922	TK C-terminal domain-like
SD28_05180	SSF54631	CBS-domain pair
SD28_05185	SSF46785	"Winged helix" DNA-binding domain
SD28_05185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05190	SSF57903	FYVE/PHD zinc finger
SD28_05200	SSF109604	HD-domain/PDEase-like
SD28_05205	SSF103473	MFS general substrate transporter
SD28_05210	SSF51556	Metallo-dependent hydrolases
SD28_05215	SSF51569	Aldolase
SD28_05220	SSF53613	Ribokinase-like
SD28_05225	SSF51658	Xylose isomerase-like
SD28_05230	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SD28_05230	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_05245	SSF103473	MFS general substrate transporter
SD28_05250	SSF51905	FAD/NAD(P)-binding domain
SD28_05250	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
SD28_05255	SSF56219	DNase I-like
SD28_05260	SSF46589	tRNA-binding arm
SD28_05260	SSF55681	Class II aaRS and biotin synthetases
SD28_05285	SSF46955	Putative DNA-binding domain
SD28_05285	SSF50249	Nucleic acid-binding proteins
SD28_05285	SSF54991	Anticodon-binding domain of PheRS
SD28_05285	SSF55681	Class II aaRS and biotin synthetases
SD28_05285	SSF56037	PheT/TilS domain
SD28_05290	SSF56024	Phospholipase D/nuclease
SD28_05295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05300	SSF51283	dUTPase-like
SD28_05305	SSF50182	Sm-like ribonucleoproteins
SD28_05315	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SD28_05315	SSF50677	ValRS/IleRS/LeuRS editing domain
SD28_05315	SSF52374	Nucleotidylyl transferase
SD28_05320	SSF53098	Ribonuclease H-like
SD28_05325	SSF143456	VC0467-like
SD28_05330	SSF55811	Nudix
SD28_05335	SSF46785	"Winged helix" DNA-binding domain
SD28_05345	SSF52833	Thioredoxin-like
SD28_05355	SSF101960	Stabilizer of iron transporter SufD
SD28_05360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05365	SSF101960	Stabilizer of iron transporter SufD
SD28_05370	SSF46785	"Winged helix" DNA-binding domain
SD28_05375	SSF116726	TrkA C-terminal domain-like
SD28_05375	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_05390	SSF51569	Aldolase
SD28_05395	SSF53187	Zn-dependent exopeptidases
SD28_05400	SSF56954	Outer membrane efflux proteins (OEP)
SD28_05405	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
SD28_05405	SSF50447	Translation proteins
SD28_05405	SSF55186	ThrRS/AlaRS common domain
SD28_05405	SSF55681	Class II aaRS and biotin synthetases
SD28_05425	SSF53613	Ribokinase-like
SD28_05425	SSF64153	YjeF N-terminal domain-like
SD28_05430	SSF52833	Thioredoxin-like
SD28_05435	SSF48600	Chorismate mutase II
SD28_05445	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_05455	SSF53800	Chelatase
SD28_05460	SSF48173	Cryptochrome/photolyase FAD-binding domain
SD28_05460	SSF52425	Cryptochrome/photolyase, N-terminal domain
SD28_05465	SSF102645	CoaB-like
SD28_05465	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
SD28_05470	SSF103473	MFS general substrate transporter
SD28_05480	SSF51730	FAD-linked oxidoreductase
SD28_05480	SSF53720	ALDH-like
SD28_05480	SSF81935	N-terminal domain of bifunctional PutA protein
SD28_05485	SSF109910	YgfY-like
SD28_05495	SSF56796	Dehydroquinate synthase-like
SD28_05500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05530	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05535	SSF46548	alpha-helical ferredoxin
SD28_05535	SSF55103	FAD-linked oxidases, C-terminal domain
SD28_05535	SSF56176	FAD-binding/transporter-associated domain-like
SD28_05550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05550	SSF54814	Prokaryotic type KH domain (KH-domain type II)
SD28_05555	SSF53383	PLP-dependent transferases
SD28_05560	SSF53067	Actin-like ATPase domain
SD28_05565	SSF51338	Composite domain of metallo-dependent hydrolases
SD28_05565	SSF51556	Metallo-dependent hydrolases
SD28_05570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05575	SSF81901	HCP-like
SD28_05580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05580	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
SD28_05585	SSF56784	HAD-like
SD28_05590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_05595	SSF102114	Radical SAM enzymes
SD28_05600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05605	SSF55486	Metalloproteases ("zincins"), catalytic domain
SD28_05610	SSF54631	CBS-domain pair
SD28_05610	SSF56176	FAD-binding/transporter-associated domain-like
SD28_05615	SSF56317	Carbon-nitrogen hydrolase
SD28_05630	SSF56784	HAD-like
SD28_05640	SSF111337	QueA-like
SD28_05645	SSF51905	FAD/NAD(P)-binding domain
SD28_05650	SSF51905	FAD/NAD(P)-binding domain
SD28_05655	SSF101327	YgfB-like
SD28_05670	SSF54060	His-Me finger endonucleases
SD28_05675	SSF53092	Creatinase/prolidase N-terminal domain
SD28_05675	SSF55920	Creatinase/aminopeptidase
SD28_05680	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
SD28_05685	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
SD28_05690	SSF102705	NIF3 (NGG1p interacting factor 3)-like
SD28_05700	SSF53098	Ribonuclease H-like
SD28_05710	SSF103473	MFS general substrate transporter
SD28_05715	SSF53697	SIS domain
SD28_05720	SSF118215	Proton glutamate symport protein
SD28_05725	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_05730	SSF54631	CBS-domain pair
SD28_05730	SSF56176	FAD-binding/transporter-associated domain-like
SD28_05735	SSF50715	Ribosomal protein L25-like
SD28_05740	SSF53271	PRTase-like
SD28_05750	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SD28_05760	SSF55120	Pseudouridine synthase
SD28_05760	SSF55174	Alpha-L RNA-binding motif
SD28_05765	SSF48452	TPR-like
SD28_05770	SSF102114	Radical SAM enzymes
SD28_05775	SSF48024	N-terminal domain of DnaB helicase
SD28_05775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05780	SSF55653	Ribosomal protein L9 C-domain
SD28_05780	SSF55658	L9 N-domain-like
SD28_05785	SSF46911	Ribosomal protein S18
SD28_05790	SSF54995	Ribosomal protein S6
SD28_05795	SSF102886	Coproporphyrinogen III oxidase
SD28_05805	SSF53383	PLP-dependent transferases
SD28_05810	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05815	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_05820	SSF52833	Thioredoxin-like
SD28_05825	SSF46785	"Winged helix" DNA-binding domain
SD28_05825	SSF53850	Periplasmic binding protein-like II
SD28_05830	SSF56601	beta-lactamase/transpeptidase-like
SD28_05835	SSF53955	Lysozyme-like
SD28_05840	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SD28_05845	SSF52402	Adenine nucleotide alpha hydrolases-like
SD28_05850	SSF54534	FKBP-like
SD28_05885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05885	SSF90123	ABC transporter transmembrane region
SD28_05890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05890	SSF90123	ABC transporter transmembrane region
SD28_05895	SSF118215	Proton glutamate symport protein
SD28_05900	SSF55298	YjgF-like
SD28_05905	SSF103473	MFS general substrate transporter
SD28_05915	SSF140376	ChaB-like
SD28_05920	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_05930	SSF109604	HD-domain/PDEase-like
SD28_05935	SSF103473	MFS general substrate transporter
SD28_05940	SSF55331	Tautomerase/MIF
SD28_05945	SSF51055	Carbohydrate binding domain
SD28_05945	SSF51445	(Trans)glycosidases
SD28_05955	SSF53271	PRTase-like
SD28_05960	SSF53067	Actin-like ATPase domain
SD28_05965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_05970	SSF103473	MFS general substrate transporter
SD28_05980	SSF55315	L30e-like
SD28_05980	SSF75217	alpha/beta knot
SD28_05985	SSF51984	MurCD N-terminal domain
SD28_05985	SSF53244	MurD-like peptide ligases, peptide-binding domain
SD28_05985	SSF53623	MurD-like peptide ligases, catalytic domain
SD28_05995	SSF53271	PRTase-like
SD28_06000	SSF56300	Metallo-dependent phosphatases
SD28_06005	SSF53244	MurD-like peptide ligases, peptide-binding domain
SD28_06005	SSF53623	MurD-like peptide ligases, catalytic domain
SD28_06005	SSF63418	MurE/MurF N-terminal domain
SD28_06015	SSF50715	Ribosomal protein L25-like
SD28_06015	SSF52374	Nucleotidylyl transferase
SD28_06020	SSF53795	PEP carboxykinase-like
SD28_06020	SSF68923	PEP carboxykinase N-terminal domain
SD28_06025	SSF53901	Thiolase-like
SD28_06030	SSF47336	ACP-like
SD28_06035	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06040	SSF52151	FabD/lysophospholipase-like
SD28_06040	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
SD28_06045	SSF53901	Thiolase-like
SD28_06050	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
SD28_06055	SSF57829	Zn-binding ribosomal proteins
SD28_06065	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
SD28_06065	SSF52922	TK C-terminal domain-like
SD28_06070	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06070	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
SD28_06075	SSF53748	Phosphoglycerate kinase
SD28_06080	SSF50800	PK beta-barrel domain-like
SD28_06080	SSF51621	Phosphoenolpyruvate/pyruvate domain
SD28_06080	SSF52935	PK C-terminal domain-like
SD28_06085	SSF51569	Aldolase
SD28_06105	SSF50331	MOP-like
SD28_06105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_06110	SSF161098	MetI-like
SD28_06115	SSF161098	MetI-like
SD28_06130	SSF110324	Ribosomal L27 protein-like
SD28_06135	SSF141091	L21p-like
SD28_06140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_06140	SSF81767	Pre-protein crosslinking domain of SecA
SD28_06140	SSF81886	Helical scaffold and wing domains of SecA
SD28_06150	SSF53167	Purine and uridine phosphorylases
SD28_06165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_06170	SSF46557	GreA transcript cleavage protein, N-terminal domain
SD28_06170	SSF54534	FKBP-like
SD28_06175	SSF54523	Pili subunits
SD28_06180	SSF53697	SIS domain
SD28_06185	SSF63862	Thiamin pyrophosphokinase, substrate-binding domain
SD28_06185	SSF63999	Thiamin pyrophosphokinase, catalytic domain
SD28_06190	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
SD28_06190	SSF54631	CBS-domain pair
SD28_06195	SSF52949	Macro domain-like
SD28_06195	SSF53187	Zn-dependent exopeptidases
SD28_06210	SSF63411	LuxS/MPP-like metallohydrolase
SD28_06215	SSF63411	LuxS/MPP-like metallohydrolase
SD28_06220	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_06230	SSF47240	Ferritin-like
SD28_06235	SSF53167	Purine and uridine phosphorylases
SD28_06240	SSF53927	Cytidine deaminase-like
SD28_06245	SSF50249	Nucleic acid-binding proteins
SD28_06255	SSF46548	alpha-helical ferredoxin
SD28_06255	SSF55103	FAD-linked oxidases, C-terminal domain
SD28_06255	SSF56176	FAD-binding/transporter-associated domain-like
SD28_06260	SSF53649	Alkaline phosphatase-like
SD28_06260	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
SD28_06265	SSF46589	tRNA-binding arm
SD28_06265	SSF55681	Class II aaRS and biotin synthetases
SD28_06270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_06275	SSF161111	Cation efflux protein transmembrane domain-like
SD28_06280	SSF53383	PLP-dependent transferases
SD28_06285	SSF53067	Actin-like ATPase domain
SD28_06300	SSF50486	FMT C-terminal domain-like
SD28_06305	SSF57802	Rubredoxin-like
SD28_06310	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
SD28_06315	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SD28_06330	SSF52833	Thioredoxin-like
SD28_06335	SSF56601	beta-lactamase/transpeptidase-like
SD28_06340	SSF53178	Peptidyl-tRNA hydrolase-like
SD28_06345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_06345	SSF81271	TGS-like
SD28_06350	SSF53244	MurD-like peptide ligases, peptide-binding domain
SD28_06350	SSF53623	MurD-like peptide ligases, catalytic domain
SD28_06350	SSF63418	MurE/MurF N-terminal domain
SD28_06355	SSF55681	Class II aaRS and biotin synthetases
SD28_06360	SSF53383	PLP-dependent transferases
SD28_06365	SSF53383	PLP-dependent transferases
SD28_06370	SSF51230	Single hybrid motif
SD28_06375	SSF101790	Aminomethyltransferase beta-barrel domain
SD28_06375	SSF103025	Folate-binding domain
SD28_06380	SSF53383	PLP-dependent transferases
SD28_06380	SSF55904	Ornithine decarboxylase C-terminal domain
SD28_06390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_06405	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_06415	SSF46689	Homeodomain-like
SD28_06420	SSF89550	PHP domain-like
SD28_06430	SSF48435	Bacterial muramidases
SD28_06430	SSF53955	Lysozyme-like
SD28_06435	SSF53383	PLP-dependent transferases
SD28_06440	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06440	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
SD28_06445	SSF101904	GyrA/ParC C-terminal domain-like
SD28_06445	SSF56719	Type II DNA topoisomerase
SD28_06455	SSF55920	Creatinase/aminopeptidase
SD28_06460	SSF101386	all-alpha NTP pyrophosphatases
SD28_06465	SSF51230	Single hybrid motif
SD28_06470	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SD28_06475	SSF82607	YbaB-like
SD28_06480	SSF111304	Recombination protein RecR
SD28_06490	SSF109604	HD-domain/PDEase-like
SD28_06490	SSF55021	ACT-like
SD28_06490	SSF81271	TGS-like
SD28_06490	SSF81301	Nucleotidyltransferase
SD28_06505	SSF53623	MurD-like peptide ligases, catalytic domain
SD28_06510	SSF103481	Multidrug resistance efflux transporter EmrE
SD28_06515	SSF102114	Radical SAM enzymes
SD28_06520	SSF53474	alpha/beta-Hydrolases
SD28_06525	SSF46929	DNA helicase RuvA subunit, C-terminal domain
SD28_06525	SSF47781	RuvA domain 2-like
SD28_06525	SSF50249	Nucleic acid-binding proteins
SD28_06535	SSF53098	Ribonuclease H-like
SD28_06540	SSF75625	YebC-like
SD28_06545	SSF52317	Class I glutamine amidotransferase-like
SD28_06550	SSF102114	Radical SAM enzymes
SD28_06555	SSF47240	Ferritin-like
SD28_06590	SSF48150	DNA-glycosylase
SD28_06595	SSF54862	4Fe-4S ferredoxins
SD28_06600	SSF47616	GST C-terminal domain-like
SD28_06600	SSF52833	Thioredoxin-like
SD28_06605	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SD28_06620	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SD28_06630	SSF53383	PLP-dependent transferases
SD28_06635	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06640	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06660	SSF53474	alpha/beta-Hydrolases
SD28_06670	SSF53098	Ribonuclease H-like
SD28_06690	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06695	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06700	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_06705	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SD28_06725	SSF51197	Clavaminate synthase-like
SD28_06730	SSF51269	AFP III-like domain
SD28_06730	SSF51569	Aldolase
SD28_06740	SSF53383	PLP-dependent transferases
SD28_06745	SSF55729	Acyl-CoA N-acyltransferases (Nat)
SD28_06750	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_06755	SSF51430	NAD(P)-linked oxidoreductase
SD28_06760	SSF53383	PLP-dependent transferases
SD28_06765	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06770	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SD28_06770	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06770	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
SD28_06795	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06795	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_06800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_06810	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
SD28_06815	SSF52833	Thioredoxin-like
SD28_06820	SSF56801	Acetyl-CoA synthetase-like
SD28_06825	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
SD28_06825	SSF56645	Acyl-CoA dehydrogenase NM domain-like
SD28_06830	SSF47027	Acyl-CoA binding protein
SD28_06830	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SD28_06830	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06830	SSF52096	ClpP/crotonase
SD28_06835	SSF53901	Thiolase-like
SD28_06840	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
SD28_06845	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
SD28_06850	SSF52768	Arginase/deacetylase
SD28_06865	SSF52172	CheY-like
SD28_06870	SSF47384	Homodimeric domain of signal transducing histidine kinase
SD28_06870	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SD28_06875	SSF51905	FAD/NAD(P)-binding domain
SD28_06885	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_06895	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06905	SSF50249	Nucleic acid-binding proteins
SD28_06910	SSF55120	Pseudouridine synthase
SD28_06915	SSF54768	dsRNA-binding domain-like
SD28_06915	SSF69065	RNase III domain-like
SD28_06920	SSF51306	LexA/Signal peptidase
SD28_06925	SSF46894	C-terminal effector domain of the bipartite response regulators
SD28_06925	SSF52172	CheY-like
SD28_06930	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
SD28_06930	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_06935	SSF52972	ITPase-like
SD28_06940	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
SD28_06945	SSF48576	Terpenoid synthases
SD28_06955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_06980	SSF57850	RING/U-box
SD28_06990	SSF51905	FAD/NAD(P)-binding domain
SD28_07000	SSF118116	DNA mismatch repair protein MutL
SD28_07000	SSF54211	Ribosomal protein S5 domain 2-like
SD28_07000	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SD28_07010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_07015	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SD28_07015	SSF52374	Nucleotidylyl transferase
SD28_07015	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SD28_07025	SSF109998	Triger factor/SurA peptide-binding domain-like
SD28_07025	SSF54534	FKBP-like
SD28_07030	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_07035	SSF56300	Metallo-dependent phosphatases
SD28_07040	SSF52304	Type II 3-dehydroquinate dehydratase
SD28_07045	SSF51230	Single hybrid motif
SD28_07050	SSF51246	Rudiment single hybrid motif
SD28_07050	SSF52440	PreATP-grasp domain
SD28_07050	SSF56059	Glutathione synthetase ATP-binding domain-like
SD28_07065	SSF55681	Class II aaRS and biotin synthetases
SD28_07070	SSF55681	Class II aaRS and biotin synthetases
SD28_07075	SSF64182	DHH phosphoesterases
SD28_07085	SSF51120	beta-Roll
SD28_07085	SSF53474	alpha/beta-Hydrolases
SD28_07095	SSF52980	Restriction endonuclease-like
SD28_07105	SSF52980	Restriction endonuclease-like
SD28_07115	SSF51230	Single hybrid motif
SD28_07120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_07120	SSF90123	ABC transporter transmembrane region
SD28_07135	SSF53850	Periplasmic binding protein-like II
SD28_07150	SSF75217	alpha/beta knot
SD28_07155	SSF51569	Aldolase
SD28_07160	SSF75471	YhbY-like
SD28_07165	SSF48019	post-AAA+ oligomerization domain-like
SD28_07165	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_07170	SSF52096	ClpP/crotonase
SD28_07175	SSF47616	GST C-terminal domain-like
SD28_07175	SSF52833	Thioredoxin-like
SD28_07180	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
SD28_07185	SSF111148	YggX-like
SD28_07200	SSF48403	Ankyrin repeat
SD28_07210	SSF53244	MurD-like peptide ligases, peptide-binding domain
SD28_07210	SSF53623	MurD-like peptide ligases, catalytic domain
SD28_07225	SSF50249	Nucleic acid-binding proteins
SD28_07300	SSF53697	SIS domain
SD28_07300	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
SD28_07305	SSF51161	Trimeric LpxA-like enzymes
SD28_07305	SSF53448	Nucleotide-diphospho-sugar transferases
SD28_07310	SSF52374	Nucleotidylyl transferase
SD28_07310	SSF55811	Nudix
SD28_07355	SSF55486	Metalloproteases ("zincins"), catalytic domain
SD28_07360	SSF109604	HD-domain/PDEase-like
SD28_07360	SSF81271	TGS-like
SD28_07360	SSF81301	Nucleotidyltransferase
SD28_07380	SSF46565	Chaperone J-domain
SD28_07380	SSF49493	HSP40/DnaJ peptide-binding domain
SD28_07390	SSF56973	Aerolisin/ETX pore-forming domain
SD28_07395	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
SD28_07395	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
SD28_07405	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_07405	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
SD28_07410	SSF160996	HI0933 insert domain-like
SD28_07410	SSF51905	FAD/NAD(P)-binding domain
SD28_07420	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_07425	SSF51905	FAD/NAD(P)-binding domain
SD28_07435	SSF48592	GroEL equatorial domain-like
SD28_07435	SSF52029	GroEL apical domain-like
SD28_07435	SSF54849	GroEL-intermediate domain like
SD28_07440	SSF50129	GroES-like
SD28_07460	SSF47789	C-terminal domain of RNA polymerase alpha subunit
SD28_07460	SSF55257	RBP11-like subunits of RNA polymerase
SD28_07460	SSF56553	Insert subdomain of RNA polymerase alpha subunit
SD28_07465	SSF48019	post-AAA+ oligomerization domain-like
SD28_07465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_07470	SSF53067	Actin-like ATPase domain
SD28_07475	SSF52833	Thioredoxin-like
SD28_07480	SSF50249	Nucleic acid-binding proteins
SD28_07480	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_07480	SSF68912	Rho N-terminal domain-like
SD28_07520	SSF159501	EreA/ChaN-like
SD28_07525	SSF53271	PRTase-like
SD28_07540	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SD28_07540	SSF50249	Nucleic acid-binding proteins
SD28_07540	SSF52374	Nucleotidylyl transferase
SD28_07540	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
SD28_07550	SSF55821	YrdC/RibB
SD28_07565	SSF53067	Actin-like ATPase domain
SD28_07570	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_07580	SSF56112	Protein kinase-like (PK-like)
SD28_07585	SSF54197	HIT-like
SD28_07590	SSF53271	PRTase-like
SD28_07595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_07605	SSF56176	FAD-binding/transporter-associated domain-like
SD28_07605	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
SD28_07610	SSF55205	EPT/RTPC-like
SD28_07615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_07625	SSF53474	alpha/beta-Hydrolases
SD28_07640	SSF51735	NAD(P)-binding Rossmann-fold domains
SD28_07640	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
SD28_07645	SSF52374	Nucleotidylyl transferase
SD28_07645	SSF82114	Riboflavin kinase-like
SD28_07650	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
SD28_07650	SSF50677	ValRS/IleRS/LeuRS editing domain
SD28_07650	SSF52374	Nucleotidylyl transferase
SD28_07665	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
SD28_07670	SSF52266	SGNH hydrolase
SD28_07675	SSF52317	Class I glutamine amidotransferase-like
SD28_07680	SSF110849	ParB/Sulfiredoxin
SD28_07685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
SD28_07690	SSF56712	Prokaryotic type I DNA topoisomerase
SD28_07690	SSF57783	Zinc beta-ribbon
SD28_07715	SSF64076	MTH938-like