locus-tag class description HME7025_00001 PF05199 GMC oxidoreductase HME7025_00001 PF00732 GMC oxidoreductase HME7025_00003 PF00106 short chain dehydrogenase HME7025_00004 PF00107 Zinc-binding dehydrogenase HME7025_00004 PF08240 Alcohol dehydrogenase GroES-like domain HME7025_00013 PF00535 Glycosyl transferase family 2 HME7025_00019 PF01638 HxlR-like helix-turn-helix HME7025_00026 PF07670 Nucleoside recognition HME7025_00029 PF16363 GDP-mannose 4,6 dehydratase HME7025_00030 PF00501 AMP-binding enzyme HME7025_00034 PF01134 Glucose inhibited division protein A HME7025_00034 PF13932 GidA associated domain HME7025_00035 PF02130 Uncharacterized protein family UPF0054 HME7025_00036 PF02021 Uncharacterised protein family UPF0102 HME7025_00037 PF03099 Biotin/lipoate A/B protein ligase family HME7025_00041 PF00654 Voltage gated chloride channel HME7025_00042 PF00270 DEAD/DEAH box helicase HME7025_00042 PF00271 Helicase conserved C-terminal domain HME7025_00045 PF00132 Bacterial transferase hexapeptide (six repeats) HME7025_00049 PF11967 Recombination protein O N terminal HME7025_00049 PF02565 Recombination protein O C terminal HME7025_00052 PF00490 Delta-aminolevulinic acid dehydratase HME7025_00053 PF02769 AIR synthase related protein, C-terminal domain HME7025_00053 PF00586 AIR synthase related protein, N-terminal domain HME7025_00054 PF00829 Ribosomal prokaryotic L21 protein HME7025_00055 PF01016 Ribosomal L27 protein HME7025_00056 PF01106 NifU-like domain HME7025_00058 PF00121 Triosephosphate isomerase HME7025_00059 PF01915 Glycosyl hydrolase family 3 C-terminal domain HME7025_00059 PF00933 Glycosyl hydrolase family 3 N terminal domain HME7025_00060 PF08338 Domain of unknown function (DUF1731) HME7025_00060 PF01370 NAD dependent epimerase/dehydratase family HME7025_00061 PF03641 Possible lysine decarboxylase HME7025_00062 PF00223 Photosystem I psaA/psaB protein HME7025_00062 PF00691 OmpA family HME7025_00065 PF00144 Beta-lactamase HME7025_00066 PF01381 Helix-turn-helix HME7025_00097 PF13539 D-alanyl-D-alanine carboxypeptidase HME7025_00110 PF01037 Lrp/AsnC ligand binding domain HME7025_00112 PF00127 Copper binding proteins, plastocyanin/azurin family HME7025_00119 PF00248 Aldo/keto reductase family HME7025_00120 PF17876 Cold shock domain HME7025_00120 PF00773 RNB domain HME7025_00120 PF00575 S1 RNA binding domain HME7025_00120 PF08206 Ribonuclease B OB domain HME7025_00122 PF08669 Glycine cleavage T-protein C-terminal barrel domain HME7025_00122 PF01571 Aminomethyltransferase folate-binding domain HME7025_00123 PF04029 2-phosphosulpholactate phosphatase HME7025_00124 PF00291 Pyridoxal-phosphate dependent enzyme HME7025_00124 PF14821 Threonine synthase N terminus HME7025_00128 PF00535 Glycosyl transferase family 2 HME7025_00129 PF16363 GDP-mannose 4,6 dehydratase HME7025_00130 PF16363 GDP-mannose 4,6 dehydratase HME7025_00135 PF01055 Glycosyl hydrolases family 31 HME7025_00135 PF13802 Galactose mutarotase-like HME7025_00135 PF17137 Domain of unknown function (DUF5110) HME7025_00135 PF16338 Domain of unknown function (DUF4968) HME7025_00139 PF01323 DSBA-like thioredoxin domain HME7025_00140 PF06969 HemN C-terminal domain HME7025_00140 PF04055 Radical SAM superfamily HME7025_00158 PF00474 Sodium:solute symporter family HME7025_00159 PF00701 Dihydrodipicolinate synthetase family HME7025_00162 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HME7025_00162 PF12833 Helix-turn-helix domain HME7025_00163 PF07715 TonB-dependent Receptor Plug Domain HME7025_00163 PF00593 TonB dependent receptor HME7025_00166 PF04794 YdjC-like protein HME7025_00176 PF10282 Lactonase, 7-bladed beta-propeller HME7025_00177 PF04794 YdjC-like protein HME7025_00179 PF00248 Aldo/keto reductase family HME7025_00180 PF01425 Amidase HME7025_00181 PF05721 Phytanoyl-CoA dioxygenase (PhyH) HME7025_00182 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_00182 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_00183 PF00294 pfkB family carbohydrate kinase HME7025_00189 PF00884 Sulfatase HME7025_00189 PF16347 Domain of unknown function (DUF4976) HME7025_00190 PF00884 Sulfatase HME7025_00190 PF16347 Domain of unknown function (DUF4976) HME7025_00194 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HME7025_00194 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HME7025_00202 PF00083 Sugar (and other) transporter HME7025_00203 PF00356 Bacterial regulatory proteins, lacI family HME7025_00204 PF07715 TonB-dependent Receptor Plug Domain HME7025_00204 PF00593 TonB dependent receptor HME7025_00206 PF13618 Gluconate 2-dehydrogenase subunit 3 HME7025_00207 PF00732 GMC oxidoreductase HME7025_00207 PF05199 GMC oxidoreductase HME7025_00209 PF02463 RecF/RecN/SMC N terminal domain HME7025_00210 PF00676 Dehydrogenase E1 component HME7025_00211 PF12344 Ultra-violet resistance protein B HME7025_00211 PF04851 Type III restriction enzyme, res subunit HME7025_00211 PF17757 UvrB interaction domain HME7025_00211 PF00271 Helicase conserved C-terminal domain HME7025_00211 PF02151 UvrB/uvrC motif HME7025_00212 PF00722 Glycosyl hydrolases family 16 HME7025_00213 PF00722 Glycosyl hydrolases family 16 HME7025_00214 PF03819 MazG nucleotide pyrophosphohydrolase domain HME7025_00215 PF01263 Aldose 1-epimerase HME7025_00216 PF00575 S1 RNA binding domain HME7025_00217 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_00217 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_00219 PF00440 Bacterial regulatory proteins, tetR family HME7025_00219 PF17932 Tetracyclin repressor-like, C-terminal domain HME7025_00222 PF00873 AcrB/AcrD/AcrF family HME7025_00224 PF01979 Amidohydrolase family HME7025_00225 PF00155 Aminotransferase class I and II HME7025_00226 PF02595 Glycerate kinase family HME7025_00229 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HME7025_00229 PF01502 Phosphoribosyl-AMP cyclohydrolase HME7025_00230 PF00977 Histidine biosynthesis protein HME7025_00231 PF00977 Histidine biosynthesis protein HME7025_00232 PF00117 Glutamine amidotransferase class-I HME7025_00234 PF00270 DEAD/DEAH box helicase HME7025_00234 PF00271 Helicase conserved C-terminal domain HME7025_00235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_00238 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HME7025_00238 PF01676 Metalloenzyme superfamily HME7025_00241 PF03952 Enolase, N-terminal domain HME7025_00241 PF00113 Enolase, C-terminal TIM barrel domain HME7025_00242 PF00085 Thioredoxin HME7025_00243 PF00248 Aldo/keto reductase family HME7025_00251 PF00535 Glycosyl transferase family 2 HME7025_00252 PF02527 rRNA small subunit methyltransferase G HME7025_00254 PF01384 Phosphate transporter family HME7025_00256 PF00575 S1 RNA binding domain HME7025_00256 PF10150 Ribonuclease E/G family HME7025_00258 PF00216 Bacterial DNA-binding protein HME7025_00259 PF14815 NUDIX domain HME7025_00259 PF00730 HhH-GPD superfamily base excision DNA repair protein HME7025_00259 PF00633 Helix-hairpin-helix motif HME7025_00260 PF00436 Single-strand binding protein family HME7025_00261 PF03471 Transporter associated domain HME7025_00261 PF00571 CBS domain HME7025_00264 PF00580 UvrD/REP helicase N-terminal domain HME7025_00264 PF13361 UvrD-like helicase C-terminal domain HME7025_00270 PF00593 TonB dependent receptor HME7025_00272 PF01966 HD domain HME7025_00274 PF00245 Alkaline phosphatase HME7025_00275 PF01266 FAD dependent oxidoreductase HME7025_00277 PF07715 TonB-dependent Receptor Plug Domain HME7025_00277 PF00593 TonB dependent receptor HME7025_00282 PF03309 Type III pantothenate kinase HME7025_00283 PF02261 Aspartate decarboxylase HME7025_00284 PF02548 Ketopantoate hydroxymethyltransferase HME7025_00285 PF02569 Pantoate-beta-alanine ligase HME7025_00286 PF04127 DNA / pantothenate metabolism flavoprotein HME7025_00286 PF02441 Flavoprotein HME7025_00287 PF07690 Major Facilitator Superfamily HME7025_00288 PF01546 Peptidase family M20/M25/M40 HME7025_00288 PF07687 Peptidase dimerisation domain HME7025_00290 PF02614 Glucuronate isomerase HME7025_00291 PF08125 Mannitol dehydrogenase C-terminal domain HME7025_00291 PF01232 Mannitol dehydrogenase Rossmann domain HME7025_00297 PF00623 RNA polymerase Rpb1, domain 2 HME7025_00297 PF05000 RNA polymerase Rpb1, domain 4 HME7025_00297 PF04997 RNA polymerase Rpb1, domain 1 HME7025_00297 PF04983 RNA polymerase Rpb1, domain 3 HME7025_00297 PF04998 RNA polymerase Rpb1, domain 5 HME7025_00298 PF04565 RNA polymerase Rpb2, domain 3 HME7025_00298 PF04560 RNA polymerase Rpb2, domain 7 HME7025_00298 PF04561 RNA polymerase Rpb2, domain 2 HME7025_00298 PF04563 RNA polymerase beta subunit HME7025_00298 PF10385 RNA polymerase beta subunit external 1 domain HME7025_00298 PF00562 RNA polymerase Rpb2, domain 6 HME7025_00300 PF00171 Aldehyde dehydrogenase family HME7025_00310 PF02637 GatB domain HME7025_00310 PF02934 GatB/GatE catalytic domain HME7025_00311 PF00578 AhpC/TSA family HME7025_00312 PF14748 Pyrroline-5-carboxylate reductase dimerisation HME7025_00312 PF03807 NADP oxidoreductase coenzyme F420-dependent HME7025_00314 PF08676 MutL C terminal dimerisation domain HME7025_00314 PF01119 DNA mismatch repair protein, C-terminal domain HME7025_00315 PF16320 Ribosomal protein L7/L12 dimerisation domain HME7025_00315 PF00542 Ribosomal protein L7/L12 C-terminal domain HME7025_00316 PF00466 Ribosomal protein L10 HME7025_00317 PF00687 Ribosomal protein L1p/L10e family HME7025_00318 PF03946 Ribosomal protein L11, N-terminal domain HME7025_00318 PF00298 Ribosomal protein L11, RNA binding domain HME7025_00320 PF02357 Transcription termination factor nusG HME7025_00320 PF00467 KOW motif HME7025_00324 PF03143 Elongation factor Tu C-terminal domain HME7025_00324 PF03144 Elongation factor Tu domain 2 HME7025_00324 PF00009 Elongation factor Tu GTP binding domain HME7025_00331 PF01177 Asp/Glu/Hydantoin racemase HME7025_00333 PF04238 Protein of unknown function (DUF420) HME7025_00337 PF00510 Cytochrome c oxidase subunit III HME7025_00338 PF01040 UbiA prenyltransferase family HME7025_00340 PF00115 Cytochrome C and Quinol oxidase polypeptide I HME7025_00341 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HME7025_00341 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HME7025_00346 PF13247 4Fe-4S dicluster domain HME7025_00346 PF00037 4Fe-4S binding domain HME7025_00349 PF00149 Calcineurin-like phosphoesterase HME7025_00350 PF01370 NAD dependent epimerase/dehydratase family HME7025_00351 PF07687 Peptidase dimerisation domain HME7025_00351 PF01546 Peptidase family M20/M25/M40 HME7025_00355 PF03462 PCRF domain HME7025_00355 PF00472 RF-1 domain HME7025_00356 PF00512 His Kinase A (phospho-acceptor) domain HME7025_00356 PF16736 Single Cache-like HME7025_00356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_00356 PF00989 PAS fold HME7025_00357 PF08328 Adenylosuccinate lyase C-terminal HME7025_00357 PF00206 Lyase HME7025_00358 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HME7025_00359 PF04715 Anthranilate synthase component I, N terminal region HME7025_00359 PF00425 chorismate binding enzyme HME7025_00360 PF00117 Glutamine amidotransferase class-I HME7025_00360 PF02885 Glycosyl transferase family, helical bundle domain HME7025_00360 PF00591 Glycosyl transferase family, a/b domain HME7025_00361 PF00591 Glycosyl transferase family, a/b domain HME7025_00361 PF02885 Glycosyl transferase family, helical bundle domain HME7025_00362 PF00218 Indole-3-glycerol phosphate synthase HME7025_00363 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HME7025_00364 PF00291 Pyridoxal-phosphate dependent enzyme HME7025_00365 PF00290 Tryptophan synthase alpha chain HME7025_00366 PF01245 Ribosomal protein L19 HME7025_00368 PF00005 ABC transporter HME7025_00369 PF01757 Acyltransferase family HME7025_00371 PF03144 Elongation factor Tu domain 2 HME7025_00371 PF00679 Elongation factor G C-terminus HME7025_00371 PF14492 Elongation Factor G, domain II HME7025_00371 PF03764 Elongation factor G, domain IV HME7025_00371 PF00009 Elongation factor Tu GTP binding domain HME7025_00372 PF00156 Phosphoribosyl transferase domain HME7025_00373 PF03781 Sulfatase-modifying factor enzyme 1 HME7025_00374 PF17757 UvrB interaction domain HME7025_00374 PF02559 CarD-like/TRCF domain HME7025_00374 PF00271 Helicase conserved C-terminal domain HME7025_00374 PF03461 TRCF domain HME7025_00374 PF00270 DEAD/DEAH box helicase HME7025_00376 PF00795 Carbon-nitrogen hydrolase HME7025_00376 PF00535 Glycosyl transferase family 2 HME7025_00377 PF03741 Integral membrane protein TerC family HME7025_00382 PF01593 Flavin containing amine oxidoreductase HME7025_00384 PF00801 PKD domain HME7025_00384 PF05547 Immune inhibitor A peptidase M6 HME7025_00385 PF09905 DNA-binding protein VF530 HME7025_00386 PF00005 ABC transporter HME7025_00386 PF16326 ABC transporter C-terminal domain HME7025_00386 PF12848 ABC transporter HME7025_00387 PF00902 Sec-independent protein translocase protein (TatC) HME7025_00388 PF00464 Serine hydroxymethyltransferase HME7025_00389 PF00085 Thioredoxin HME7025_00389 PF11412 Disulphide bond corrector protein DsbC HME7025_00389 PF02683 Cytochrome C biogenesis protein transmembrane region HME7025_00393 PF00248 Aldo/keto reductase family HME7025_00394 PF00175 Oxidoreductase NAD-binding domain HME7025_00394 PF00111 2Fe-2S iron-sulfur cluster binding domain HME7025_00394 PF00970 Oxidoreductase FAD-binding domain HME7025_00395 PF02638 Glycosyl hydrolase-like 10 HME7025_00396 PF00072 Response regulator receiver domain HME7025_00396 PF00486 Transcriptional regulatory protein, C terminal HME7025_00397 PF01594 AI-2E family transporter HME7025_00398 PF00072 Response regulator receiver domain HME7025_00398 PF04397 LytTr DNA-binding domain HME7025_00399 PF07694 5TMR of 5TMR-LYT HME7025_00399 PF06580 Histidine kinase HME7025_00399 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_00399 PF13492 GAF domain HME7025_00400 PF00300 Histidine phosphatase superfamily (branch 1) HME7025_00401 PF03061 Thioesterase superfamily HME7025_00404 PF00296 Luciferase-like monooxygenase HME7025_00405 PF03358 NADPH-dependent FMN reductase HME7025_00406 PF00425 chorismate binding enzyme HME7025_00407 PF03471 Transporter associated domain HME7025_00407 PF00571 CBS domain HME7025_00407 PF01595 Cyclin M transmembrane N-terminal domain HME7025_00409 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HME7025_00409 PF01578 Cytochrome C assembly protein HME7025_00414 PF17910 FeoB cytosolic helical domain HME7025_00414 PF04023 FeoA domain HME7025_00414 PF07670 Nucleoside recognition HME7025_00414 PF07664 Ferrous iron transport protein B C terminus HME7025_00414 PF02421 Ferrous iron transport protein B HME7025_00415 PF07670 Nucleoside recognition HME7025_00415 PF07664 Ferrous iron transport protein B C terminus HME7025_00415 PF02421 Ferrous iron transport protein B HME7025_00418 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) HME7025_00419 PF09335 SNARE associated Golgi protein HME7025_00420 PF08501 Shikimate dehydrogenase substrate binding domain HME7025_00421 PF00156 Phosphoribosyl transferase domain HME7025_00423 PF03652 Holliday junction resolvase HME7025_00428 PF01264 Chorismate synthase HME7025_00429 PF14437 MafB19-like deaminase HME7025_00430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HME7025_00430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HME7025_00432 PF00657 GDSL-like Lipase/Acylhydrolase HME7025_00432 PF00404 Dockerin type I domain HME7025_00435 PF13411 MerR HTH family regulatory protein HME7025_00435 PF02607 B12 binding domain HME7025_00436 PF00483 Nucleotidyl transferase HME7025_00436 PF01050 Mannose-6-phosphate isomerase HME7025_00437 PF00593 TonB dependent receptor HME7025_00437 PF07715 TonB-dependent Receptor Plug Domain HME7025_00438 PF17760 UvrA interaction domain HME7025_00438 PF17755 UvrA DNA-binding domain HME7025_00438 PF00005 ABC transporter HME7025_00442 PF04116 Fatty acid hydroxylase superfamily HME7025_00443 PF02754 Cysteine-rich domain HME7025_00443 PF13183 4Fe-4S dicluster domain HME7025_00443 PF02665 Nitrate reductase gamma subunit HME7025_00445 PF13185 GAF domain HME7025_00446 PF05163 DinB family HME7025_00447 PF02666 Phosphatidylserine decarboxylase HME7025_00449 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HME7025_00449 PF00326 Prolyl oligopeptidase family HME7025_00452 PF02391 MoaE protein HME7025_00453 PF00186 Dihydrofolate reductase HME7025_00454 PF02142 MGS-like domain HME7025_00454 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HME7025_00454 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HME7025_00458 PF00529 HlyD membrane-fusion protein of T1SS HME7025_00458 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HME7025_00459 PF00873 AcrB/AcrD/AcrF family HME7025_00460 PF02321 Outer membrane efflux protein HME7025_00461 PF00551 Formyl transferase HME7025_00462 PF13439 Glycosyltransferase Family 4 HME7025_00462 PF00534 Glycosyl transferases group 1 HME7025_00464 PF02152 Dihydroneopterin aldolase HME7025_00464 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HME7025_00465 PF02622 Uncharacterized ACR, COG1678 HME7025_00466 PF17191 RecG wedge domain HME7025_00466 PF00271 Helicase conserved C-terminal domain HME7025_00466 PF00270 DEAD/DEAH box helicase HME7025_00468 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HME7025_00469 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HME7025_00472 PF00535 Glycosyl transferase family 2 HME7025_00473 PF00664 ABC transporter transmembrane region HME7025_00473 PF00005 ABC transporter HME7025_00475 PF06965 Na+/H+ antiporter 1 HME7025_00477 PF00578 AhpC/TSA family HME7025_00478 PF01795 MraW methylase family HME7025_00480 PF00905 Penicillin binding protein transpeptidase domain HME7025_00480 PF03717 Penicillin-binding Protein dimerisation domain HME7025_00480 PF03793 PASTA domain HME7025_00481 PF08245 Mur ligase middle domain HME7025_00481 PF01225 Mur ligase family, catalytic domain HME7025_00481 PF02875 Mur ligase family, glutamate ligase domain HME7025_00482 PF00953 Glycosyl transferase family 4 HME7025_00482 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HME7025_00483 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HME7025_00484 PF01979 Amidohydrolase family HME7025_00486 PF02222 ATP-grasp domain HME7025_00486 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HME7025_00487 PF00731 AIR carboxylase HME7025_00490 PF02911 Formyl transferase, C-terminal domain HME7025_00490 PF00551 Formyl transferase HME7025_00491 PF03449 Transcription elongation factor, N-terminal HME7025_00491 PF01272 Transcription elongation factor, GreA/GreB, C-term HME7025_00493 PF01168 Alanine racemase, N-terminal domain HME7025_00495 PF01250 Ribosomal protein S6 HME7025_00496 PF01084 Ribosomal protein S18 HME7025_00497 PF03948 Ribosomal protein L9, C-terminal domain HME7025_00497 PF01281 Ribosomal protein L9, N-terminal domain HME7025_00498 PF00180 Isocitrate/isopropylmalate dehydrogenase HME7025_00499 PF01842 ACT domain HME7025_00499 PF00551 Formyl transferase HME7025_00500 PF02978 Signal peptide binding domain HME7025_00500 PF02881 SRP54-type protein, helical bundle domain HME7025_00500 PF00448 SRP54-type protein, GTPase domain HME7025_00502 PF01588 Putative tRNA binding domain HME7025_00502 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HME7025_00502 PF03147 Ferredoxin-fold anticodon binding domain HME7025_00502 PF03484 tRNA synthetase B5 domain HME7025_00502 PF03483 B3/4 domain HME7025_00503 PF01327 Polypeptide deformylase HME7025_00504 PF00719 Inorganic pyrophosphatase HME7025_00505 PF01343 Peptidase family S49 HME7025_00506 PF06968 Biotin and Thiamin Synthesis associated domain HME7025_00506 PF04055 Radical SAM superfamily HME7025_00509 PF12072 Domain of unknown function (DUF3552) HME7025_00509 PF00013 KH domain HME7025_00509 PF01966 HD domain HME7025_00513 PF04397 LytTr DNA-binding domain HME7025_00513 PF00072 Response regulator receiver domain HME7025_00514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_00514 PF06580 Histidine kinase HME7025_00518 PF02779 Transketolase, pyrimidine binding domain HME7025_00518 PF02780 Transketolase, C-terminal domain HME7025_00520 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HME7025_00521 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HME7025_00522 PF08459 UvrC Helix-hairpin-helix N-terminal HME7025_00522 PF01541 GIY-YIG catalytic domain HME7025_00527 PF00905 Penicillin binding protein transpeptidase domain HME7025_00527 PF00912 Transglycosylase HME7025_00530 PF00905 Penicillin binding protein transpeptidase domain HME7025_00530 PF03717 Penicillin-binding Protein dimerisation domain HME7025_00531 PF01098 Cell cycle protein HME7025_00532 PF00083 Sugar (and other) transporter HME7025_00532 PF07690 Major Facilitator Superfamily HME7025_00534 PF04241 Protein of unknown function (DUF423) HME7025_00535 PF00213 ATP synthase delta (OSCP) subunit HME7025_00536 PF00430 ATP synthase B/B' CF(0) HME7025_00537 PF00137 ATP synthase subunit C HME7025_00538 PF00119 ATP synthase A chain HME7025_00540 PF00561 alpha/beta hydrolase fold HME7025_00541 PF00106 short chain dehydrogenase HME7025_00542 PF03825 Nucleoside H+ symporter HME7025_00546 PF00144 Beta-lactamase HME7025_00546 PF11954 Domain of unknown function (DUF3471) HME7025_00547 PF01809 Putative membrane protein insertion efficiency factor HME7025_00548 PF07715 TonB-dependent Receptor Plug Domain HME7025_00548 PF00593 TonB dependent receptor HME7025_00555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HME7025_00555 PF02770 Acyl-CoA dehydrogenase, middle domain HME7025_00555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HME7025_00555 PF12806 Acetyl-CoA dehydrogenase C-terminal like HME7025_00557 PF01842 ACT domain HME7025_00557 PF02153 Prephenate dehydrogenase HME7025_00558 PF00155 Aminotransferase class I and II HME7025_00560 PF02631 RecX family HME7025_00561 PF01488 Shikimate / quinate 5-dehydrogenase HME7025_00561 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HME7025_00561 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HME7025_00563 PF00561 alpha/beta hydrolase fold HME7025_00564 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HME7025_00564 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HME7025_00565 PF00266 Aminotransferase class-V HME7025_00566 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_00566 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_00570 PF01709 Transcriptional regulator HME7025_00573 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_00573 PF00072 Response regulator receiver domain HME7025_00575 PF13419 Haloacid dehalogenase-like hydrolase HME7025_00576 PF00593 TonB dependent receptor HME7025_00576 PF07715 TonB-dependent Receptor Plug Domain HME7025_00579 PF01039 Carboxyl transferase domain HME7025_00579 PF17848 Acetyl-coA carboxylase zinc finger domain HME7025_00581 PF01784 NIF3 (NGG1p interacting factor 3) HME7025_00582 PF00293 NUDIX domain HME7025_00582 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HME7025_00582 PF09297 NADH pyrophosphatase zinc ribbon domain HME7025_00585 PF00480 ROK family HME7025_00585 PF01047 MarR family HME7025_00589 PF00830 Ribosomal L28 family HME7025_00590 PF00581 Rhodanese-like domain HME7025_00590 PF00899 ThiF family HME7025_00591 PF04055 Radical SAM superfamily HME7025_00591 PF00919 Uncharacterized protein family UPF0004 HME7025_00591 PF18693 TRAM domain HME7025_00598 PF08450 SMP-30/Gluconolactonase/LRE-like region HME7025_00599 PF00732 GMC oxidoreductase HME7025_00599 PF05199 GMC oxidoreductase HME7025_00601 PF17827 PrmC N-terminal domain HME7025_00601 PF05175 Methyltransferase small domain HME7025_00605 PF13580 SIS domain HME7025_00606 PF02491 SHS2 domain inserted in FTSA HME7025_00608 PF08245 Mur ligase middle domain HME7025_00608 PF02875 Mur ligase family, glutamate ligase domain HME7025_00608 PF01225 Mur ligase family, catalytic domain HME7025_00609 PF04101 Glycosyltransferase family 28 C-terminal domain HME7025_00609 PF03033 Glycosyltransferase family 28 N-terminal domain HME7025_00610 PF01098 Cell cycle protein HME7025_00611 PF08245 Mur ligase middle domain HME7025_00611 PF02875 Mur ligase family, glutamate ligase domain HME7025_00612 PF00889 Elongation factor TS HME7025_00613 PF00318 Ribosomal protein S2 HME7025_00614 PF00380 Ribosomal protein S9/S16 HME7025_00615 PF00572 Ribosomal protein L13 HME7025_00616 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HME7025_00616 PF00289 Biotin carboxylase, N-terminal domain HME7025_00616 PF02785 Biotin carboxylase C-terminal domain HME7025_00617 PF00364 Biotin-requiring enzyme HME7025_00618 PF01132 Elongation factor P (EF-P) OB domain HME7025_00618 PF09285 Elongation factor P, C-terminal HME7025_00618 PF08207 Elongation factor P (EF-P) KOW-like domain HME7025_00619 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HME7025_00619 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HME7025_00620 PF02504 Fatty acid synthesis protein HME7025_00621 PF01783 Ribosomal L32p protein family HME7025_00624 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HME7025_00625 PF00334 Nucleoside diphosphate kinase HME7025_00626 PF01368 DHH family HME7025_00626 PF02833 DHHA2 domain HME7025_00627 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HME7025_00627 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HME7025_00629 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HME7025_00630 PF01725 Ham1 family HME7025_00632 PF02660 Glycerol-3-phosphate acyltransferase HME7025_00633 PF07687 Peptidase dimerisation domain HME7025_00633 PF01546 Peptidase family M20/M25/M40 HME7025_00634 PF13580 SIS domain HME7025_00637 PF01926 50S ribosome-binding GTPase HME7025_00638 PF01208 Uroporphyrinogen decarboxylase (URO-D) HME7025_00639 PF00571 CBS domain HME7025_00639 PF00478 IMP dehydrogenase / GMP reductase domain HME7025_00640 PF02424 ApbE family HME7025_00642 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_00642 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_00643 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HME7025_00644 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HME7025_00645 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HME7025_00646 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HME7025_00648 PF10531 SLBB domain HME7025_00648 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HME7025_00648 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HME7025_00650 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HME7025_00650 PF00384 Molybdopterin oxidoreductase HME7025_00650 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HME7025_00651 PF00146 NADH dehydrogenase HME7025_00652 PF12838 4Fe-4S dicluster domain HME7025_00653 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HME7025_00656 PF06580 Histidine kinase HME7025_00656 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_00657 PF00072 Response regulator receiver domain HME7025_00657 PF04397 LytTr DNA-binding domain HME7025_00660 PF00535 Glycosyl transferase family 2 HME7025_00661 PF13439 Glycosyltransferase Family 4 HME7025_00661 PF00534 Glycosyl transferases group 1 HME7025_00662 PF02350 UDP-N-acetylglucosamine 2-epimerase HME7025_00665 PF13439 Glycosyltransferase Family 4 HME7025_00665 PF00534 Glycosyl transferases group 1 HME7025_00666 PF16363 GDP-mannose 4,6 dehydratase HME7025_00669 PF00675 Insulinase (Peptidase family M16) HME7025_00669 PF05193 Peptidase M16 inactive domain HME7025_00670 PF02542 YgbB family HME7025_00671 PF02824 TGS domain HME7025_00671 PF04607 Region found in RelA / SpoT proteins HME7025_00671 PF13291 ACT domain HME7025_00672 PF01475 Ferric uptake regulator family HME7025_00673 PF00709 Adenylosuccinate synthetase HME7025_00675 PF00814 Glycoprotease family HME7025_00681 PF02910 Fumarate reductase flavoprotein C-term HME7025_00681 PF00890 FAD binding domain HME7025_00682 PF00485 Phosphoribulokinase / Uridine kinase family HME7025_00685 PF00132 Bacterial transferase hexapeptide (six repeats) HME7025_00690 PF12867 DinB superfamily HME7025_00691 PF01820 D-ala D-ala ligase N-terminus HME7025_00691 PF07478 D-ala D-ala ligase C-terminus HME7025_00692 PF01106 NifU-like domain HME7025_00693 PF10609 NUBPL iron-transfer P-loop NTPase HME7025_00693 PF01883 Iron-sulfur cluster assembly protein HME7025_00698 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HME7025_00698 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HME7025_00700 PF07549 SecD/SecF GG Motif HME7025_00700 PF02355 Protein export membrane protein HME7025_00701 PF13520 Amino acid permease HME7025_00702 PF16658 Class II release factor RF3, C-terminal domain HME7025_00702 PF03144 Elongation factor Tu domain 2 HME7025_00702 PF00009 Elongation factor Tu GTP binding domain HME7025_00703 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HME7025_00703 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HME7025_00703 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HME7025_00703 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HME7025_00705 PF01678 Diaminopimelate epimerase HME7025_00716 PF05195 Aminopeptidase P, N-terminal domain HME7025_00716 PF00557 Metallopeptidase family M24 HME7025_00722 PF00440 Bacterial regulatory proteins, tetR family HME7025_00723 PF00144 Beta-lactamase HME7025_00724 PF16656 Purple acid Phosphatase, N-terminal domain HME7025_00724 PF00149 Calcineurin-like phosphoesterase HME7025_00727 PF01925 Sulfite exporter TauE/SafE HME7025_00728 PF00248 Aldo/keto reductase family HME7025_00729 PF04116 Fatty acid hydroxylase superfamily HME7025_00730 PF00293 NUDIX domain HME7025_00731 PF03734 L,D-transpeptidase catalytic domain HME7025_00731 PF01471 Putative peptidoglycan binding domain HME7025_00733 PF00149 Calcineurin-like phosphoesterase HME7025_00733 PF16656 Purple acid Phosphatase, N-terminal domain HME7025_00734 PF01758 Sodium Bile acid symporter family HME7025_00743 PF00756 Putative esterase HME7025_00743 PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase HME7025_00744 PF01758 Sodium Bile acid symporter family HME7025_00745 PF00728 Glycosyl hydrolase family 20, catalytic domain HME7025_00745 PF02838 Glycosyl hydrolase family 20, domain 2 HME7025_00745 PF07691 PA14 domain HME7025_00746 PF00884 Sulfatase HME7025_00746 PF16385 Domain of unknown function HME7025_00752 PF03781 Sulfatase-modifying factor enzyme 1 HME7025_00755 PF07995 Glucose / Sorbosone dehydrogenase HME7025_00760 PF00266 Aminotransferase class-V HME7025_00765 PF01435 Peptidase family M48 HME7025_00773 PF07715 TonB-dependent Receptor Plug Domain HME7025_00773 PF00593 TonB dependent receptor HME7025_00779 PF00732 GMC oxidoreductase HME7025_00779 PF05199 GMC oxidoreductase HME7025_00782 PF02308 MgtC family HME7025_00786 PF00248 Aldo/keto reductase family HME7025_00787 PF00107 Zinc-binding dehydrogenase HME7025_00787 PF08240 Alcohol dehydrogenase GroES-like domain HME7025_00788 PF01261 Xylose isomerase-like TIM barrel HME7025_00789 PF05336 L-rhamnose mutarotase HME7025_00791 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_00791 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_00792 PF03009 Glycerophosphoryl diester phosphodiesterase family HME7025_00793 PF00155 Aminotransferase class I and II HME7025_00794 PF01370 NAD dependent epimerase/dehydratase family HME7025_00797 PF00248 Aldo/keto reductase family HME7025_00801 PF03061 Thioesterase superfamily HME7025_00802 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HME7025_00802 PF14824 Sirohaem biosynthesis protein central HME7025_00802 PF10414 Sirohaem synthase dimerisation region HME7025_00803 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HME7025_00803 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HME7025_00803 PF04324 BFD-like [2Fe-2S] binding domain HME7025_00803 PF18267 Rubredoxin NAD+ reductase C-terminal domain HME7025_00803 PF07992 Pyridine nucleotide-disulphide oxidoreductase HME7025_00806 PF07690 Major Facilitator Superfamily HME7025_00807 PF00384 Molybdopterin oxidoreductase HME7025_00807 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HME7025_00807 PF01568 Molydopterin dinucleotide binding domain HME7025_00809 PF00301 Rubredoxin HME7025_00810 PF12804 MobA-like NTP transferase domain HME7025_00812 PF02585 GlcNAc-PI de-N-acetylase HME7025_00816 PF00082 Subtilase family HME7025_00821 PF03441 FAD binding domain of DNA photolyase HME7025_00821 PF00875 DNA photolyase HME7025_00822 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HME7025_00826 PF03741 Integral membrane protein TerC family HME7025_00828 PF00712 DNA polymerase III beta subunit, N-terminal domain HME7025_00828 PF02767 DNA polymerase III beta subunit, central domain HME7025_00828 PF02768 DNA polymerase III beta subunit, C-terminal domain HME7025_00831 PF00202 Aminotransferase class-III HME7025_00832 PF02774 Semialdehyde dehydrogenase, dimerisation domain HME7025_00832 PF01118 Semialdehyde dehydrogenase, NAD binding domain HME7025_00833 PF00764 Arginosuccinate synthase HME7025_00835 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HME7025_00837 PF01472 PUA domain HME7025_00837 PF00696 Amino acid kinase family HME7025_00844 PF07516 SecA Wing and Scaffold domain HME7025_00844 PF01043 SecA preprotein cross-linking domain HME7025_00844 PF07517 SecA DEAD-like domain HME7025_00850 PF01255 Putative undecaprenyl diphosphate synthase HME7025_00851 PF01103 Surface antigen HME7025_00851 PF07244 Surface antigen variable number repeat HME7025_00854 PF00270 DEAD/DEAH box helicase HME7025_00854 PF00271 Helicase conserved C-terminal domain HME7025_00855 PF00210 Ferritin-like domain HME7025_00857 PF01252 Signal peptidase (SPase) II HME7025_00858 PF01619 Proline dehydrogenase HME7025_00859 PF00793 DAHP synthetase I family HME7025_00861 PF01042 Endoribonuclease L-PSP HME7025_00862 PF00749 tRNA synthetases class I (E and Q), catalytic domain HME7025_00864 PF02686 Glu-tRNAGln amidotransferase C subunit HME7025_00865 PF01761 3-dehydroquinate synthase HME7025_00867 PF00364 Biotin-requiring enzyme HME7025_00867 PF02779 Transketolase, pyrimidine binding domain HME7025_00867 PF02780 Transketolase, C-terminal domain HME7025_00868 PF17820 PDZ domain HME7025_00868 PF13180 PDZ domain HME7025_00869 PF14229 Domain of unknown function (DUF4332) HME7025_00869 PF00152 tRNA synthetases class II (D, K and N) HME7025_00869 PF01336 OB-fold nucleic acid binding domain HME7025_00870 PF00313 'Cold-shock' DNA-binding domain HME7025_00873 PF13520 Amino acid permease HME7025_00875 PF00294 pfkB family carbohydrate kinase HME7025_00875 PF01467 Cytidylyltransferase-like HME7025_00879 PF00795 Carbon-nitrogen hydrolase HME7025_00880 PF00005 ABC transporter HME7025_00881 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HME7025_00881 PF00925 GTP cyclohydrolase II HME7025_00885 PF00005 ABC transporter HME7025_00886 PF01565 FAD binding domain HME7025_00886 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HME7025_00887 PF00793 DAHP synthetase I family HME7025_00890 PF00035 Double-stranded RNA binding motif HME7025_00890 PF14622 Ribonuclease-III-like HME7025_00891 PF02801 Beta-ketoacyl synthase, C-terminal domain HME7025_00891 PF00109 Beta-ketoacyl synthase, N-terminal domain HME7025_00892 PF00550 Phosphopantetheine attachment site HME7025_00893 PF00480 ROK family HME7025_00895 PF00265 Thymidine kinase HME7025_00897 PF00890 FAD binding domain HME7025_00897 PF02910 Fumarate reductase flavoprotein C-term HME7025_00902 PF00698 Acyl transferase domain HME7025_00906 PF00593 TonB dependent receptor HME7025_00906 PF07715 TonB-dependent Receptor Plug Domain HME7025_00908 PF01467 Cytidylyltransferase-like HME7025_00908 PF00294 pfkB family carbohydrate kinase HME7025_00916 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HME7025_00917 PF01638 HxlR-like helix-turn-helix HME7025_00918 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HME7025_00918 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HME7025_00918 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HME7025_00918 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HME7025_00919 PF00266 Aminotransferase class-V HME7025_00920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HME7025_00920 PF03129 Anticodon binding domain HME7025_00920 PF09180 Prolyl-tRNA synthetase, C-terminal HME7025_00923 PF01202 Shikimate kinase HME7025_00926 PF00809 Pterin binding enzyme HME7025_00927 PF01063 Amino-transferase class IV HME7025_00928 PF00994 Probable molybdopterin binding domain HME7025_00929 PF00899 ThiF family HME7025_00930 PF00535 Glycosyl transferase family 2 HME7025_00931 PF05175 Methyltransferase small domain HME7025_00932 PF01693 Caulimovirus viroplasmin HME7025_00933 PF01914 MarC family integral membrane protein HME7025_00934 PF00266 Aminotransferase class-V HME7025_00935 PF01220 Dehydroquinase class II HME7025_00936 PF02899 Phage integrase, N-terminal SAM-like domain HME7025_00936 PF00589 Phage integrase family HME7025_00938 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HME7025_00938 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HME7025_00939 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HME7025_00940 PF00106 short chain dehydrogenase HME7025_00941 PF02405 Permease MlaE HME7025_00945 PF01180 Dihydroorotate dehydrogenase HME7025_00946 PF09397 Ftsk gamma domain HME7025_00946 PF01580 FtsK/SpoIIIE family HME7025_00946 PF17854 FtsK alpha domain HME7025_00946 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HME7025_00951 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HME7025_00951 PF05221 S-adenosyl-L-homocysteine hydrolase HME7025_00954 PF08245 Mur ligase middle domain HME7025_00954 PF02875 Mur ligase family, glutamate ligase domain HME7025_00954 PF01225 Mur ligase family, catalytic domain HME7025_00956 PF01925 Sulfite exporter TauE/SafE HME7025_00957 PF13603 Leucyl-tRNA synthetase, Domain 2 HME7025_00957 PF08264 Anticodon-binding domain of tRNA HME7025_00957 PF00133 tRNA synthetases class I (I, L, M and V) HME7025_00958 PF16385 Domain of unknown function HME7025_00958 PF00884 Sulfatase HME7025_00961 PF01261 Xylose isomerase-like TIM barrel HME7025_00966 PF01761 3-dehydroquinate synthase HME7025_00967 PF01040 UbiA prenyltransferase family HME7025_00971 PF11842 Domain of unknown function (DUF3362) HME7025_00971 PF04055 Radical SAM superfamily HME7025_00971 PF08497 Radical SAM N-terminal HME7025_00972 PF08274 PhnA Zinc-Ribbon HME7025_00972 PF03831 PhnA domain HME7025_00975 PF00005 ABC transporter HME7025_00977 PF02646 RmuC family HME7025_00983 PF00579 tRNA synthetases class I (W and Y) HME7025_00984 PF02547 Queuosine biosynthesis protein HME7025_00986 PF01923 Cobalamin adenosyltransferase HME7025_00987 PF01063 Amino-transferase class IV HME7025_00990 PF00501 AMP-binding enzyme HME7025_00991 PF03099 Biotin/lipoate A/B protein ligase family HME7025_00991 PF02237 Biotin protein ligase C terminal domain HME7025_00993 PF00004 ATPase family associated with various cellular activities (AAA) HME7025_00993 PF17862 AAA+ lid domain HME7025_00993 PF06480 FtsH Extracellular HME7025_00993 PF01434 Peptidase family M41 HME7025_00994 PF00149 Calcineurin-like phosphoesterase HME7025_00995 PF08244 Glycosyl hydrolases family 32 C terminal HME7025_00995 PF00251 Glycosyl hydrolases family 32 N-terminal domain HME7025_00999 PF00005 ABC transporter HME7025_00999 PF13732 Domain of unknown function (DUF4162) HME7025_01002 PF03458 UPF0126 domain HME7025_01004 PF03960 ArsC family HME7025_01005 PF10415 Fumarase C C-terminus HME7025_01005 PF00206 Lyase HME7025_01007 PF01022 Bacterial regulatory protein, arsR family HME7025_01008 PF00842 Alanine racemase, C-terminal domain HME7025_01008 PF01168 Alanine racemase, N-terminal domain HME7025_01009 PF00162 Phosphoglycerate kinase HME7025_01012 PF02773 S-adenosylmethionine synthetase, C-terminal domain HME7025_01012 PF02772 S-adenosylmethionine synthetase, central domain HME7025_01012 PF00438 S-adenosylmethionine synthetase, N-terminal domain HME7025_01014 PF04055 Radical SAM superfamily HME7025_01014 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HME7025_01016 PF11009 Protein of unknown function (DUF2847) HME7025_01018 PF16745 RsgA N-terminal domain HME7025_01018 PF03193 RsgA GTPase HME7025_01019 PF00480 ROK family HME7025_01026 PF00575 S1 RNA binding domain HME7025_01026 PF16921 Tex protein YqgF-like domain HME7025_01026 PF09371 Tex-like protein N-terminal domain HME7025_01026 PF17674 HHH domain HME7025_01028 PF11798 IMS family HHH motif HME7025_01028 PF11799 impB/mucB/samB family C-terminal domain HME7025_01028 PF00817 impB/mucB/samB family HME7025_01029 PF02811 PHP domain HME7025_01029 PF14579 Helix-hairpin-helix motif HME7025_01029 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HME7025_01029 PF07733 Bacterial DNA polymerase III alpha NTPase domain HME7025_01032 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HME7025_01034 PF02586 SOS response associated peptidase (SRAP) HME7025_01037 PF01641 SelR domain HME7025_01038 PF00085 Thioredoxin HME7025_01038 PF07992 Pyridine nucleotide-disulphide oxidoreductase HME7025_01039 PF00085 Thioredoxin HME7025_01041 PF05724 Thiopurine S-methyltransferase (TPMT) HME7025_01044 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HME7025_01053 PF00753 Metallo-beta-lactamase superfamily HME7025_01053 PF00581 Rhodanese-like domain HME7025_01054 PF01925 Sulfite exporter TauE/SafE HME7025_01057 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01057 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_01058 PF00135 Carboxylesterase family HME7025_01059 PF01256 Carbohydrate kinase HME7025_01059 PF03853 YjeF-related protein N-terminus HME7025_01061 PF00144 Beta-lactamase HME7025_01062 PF00083 Sugar (and other) transporter HME7025_01064 PF00501 AMP-binding enzyme HME7025_01064 PF13193 AMP-binding enzyme C-terminal domain HME7025_01064 PF16177 Acetyl-coenzyme A synthetase N-terminus HME7025_01065 PF00005 ABC transporter HME7025_01066 PF00557 Metallopeptidase family M24 HME7025_01066 PF01321 Creatinase/Prolidase N-terminal domain HME7025_01067 PF07715 TonB-dependent Receptor Plug Domain HME7025_01067 PF00593 TonB dependent receptor HME7025_01068 PF07980 SusD family HME7025_01068 PF14322 Starch-binding associating with outer membrane HME7025_01075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_01076 PF00005 ABC transporter HME7025_01077 PF02653 Branched-chain amino acid transport system / permease component HME7025_01078 PF13407 Periplasmic binding protein domain HME7025_01082 PF01546 Peptidase family M20/M25/M40 HME7025_01088 PF00535 Glycosyl transferase family 2 HME7025_01090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01090 PF09308 LuxQ, periplasmic HME7025_01090 PF00072 Response regulator receiver domain HME7025_01090 PF00512 His Kinase A (phospho-acceptor) domain HME7025_01091 PF09308 LuxQ, periplasmic HME7025_01091 PF00072 Response regulator receiver domain HME7025_01091 PF00512 His Kinase A (phospho-acceptor) domain HME7025_01091 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01097 PF03129 Anticodon binding domain HME7025_01098 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HME7025_01100 PF00535 Glycosyl transferase family 2 HME7025_01101 PF01612 3'-5' exonuclease HME7025_01101 PF00476 DNA polymerase family A HME7025_01101 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HME7025_01101 PF01367 5'-3' exonuclease, C-terminal SAM fold HME7025_01102 PF01243 Pyridoxamine 5'-phosphate oxidase HME7025_01102 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HME7025_01106 PF04225 Opacity-associated protein A LysM-like domain HME7025_01106 PF01551 Peptidase family M23 HME7025_01107 PF07992 Pyridine nucleotide-disulphide oxidoreductase HME7025_01108 PF00375 Sodium:dicarboxylate symporter family HME7025_01109 PF00390 Malic enzyme, N-terminal domain HME7025_01109 PF03949 Malic enzyme, NAD binding domain HME7025_01109 PF01515 Phosphate acetyl/butaryl transferase HME7025_01112 PF07075 Protein of unknown function (DUF1343) HME7025_01113 PF00117 Glutamine amidotransferase class-I HME7025_01113 PF02540 NAD synthase HME7025_01113 PF00958 GMP synthase C terminal domain HME7025_01114 PF07687 Peptidase dimerisation domain HME7025_01114 PF01546 Peptidase family M20/M25/M40 HME7025_01115 PF00285 Citrate synthase, C-terminal domain HME7025_01116 PF03330 Lytic transglycolase HME7025_01116 PF05036 Sporulation related domain HME7025_01117 PF00691 OmpA family HME7025_01118 PF04055 Radical SAM superfamily HME7025_01122 PF04371 Porphyromonas-type peptidyl-arginine deiminase HME7025_01124 PF00639 PPIC-type PPIASE domain HME7025_01124 PF09312 SurA N-terminal domain HME7025_01125 PF00639 PPIC-type PPIASE domain HME7025_01125 PF09312 SurA N-terminal domain HME7025_01126 PF17863 AAA lid domain HME7025_01126 PF07726 ATPase family associated with various cellular activities (AAA) HME7025_01127 PF00303 Thymidylate synthase HME7025_01130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HME7025_01130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HME7025_01133 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HME7025_01136 PF14403 Circularly permuted ATP-grasp type 2 HME7025_01137 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HME7025_01137 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HME7025_01138 PF14791 DNA polymerase beta thumb HME7025_01138 PF02811 PHP domain HME7025_01138 PF14716 Helix-hairpin-helix domain HME7025_01139 PF03641 Possible lysine decarboxylase HME7025_01140 PF02502 Ribose/Galactose Isomerase HME7025_01142 PF02033 Ribosome-binding factor A HME7025_01143 PF02687 FtsX-like permease family HME7025_01143 PF12704 MacB-like periplasmic core domain HME7025_01144 PF00375 Sodium:dicarboxylate symporter family HME7025_01149 PF00111 2Fe-2S iron-sulfur cluster binding domain HME7025_01149 PF01799 [2Fe-2S] binding domain HME7025_01150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HME7025_01151 PF12804 MobA-like NTP transferase domain HME7025_01152 PF00586 AIR synthase related protein, N-terminal domain HME7025_01152 PF02769 AIR synthase related protein, C-terminal domain HME7025_01152 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HME7025_01153 PF01416 tRNA pseudouridine synthase HME7025_01154 PF18073 Rubredoxin metal binding domain HME7025_01156 PF01409 tRNA synthetases class II core domain (F) HME7025_01156 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HME7025_01158 PF00684 DnaJ central domain HME7025_01158 PF00226 DnaJ domain HME7025_01158 PF01556 DnaJ C terminal domain HME7025_01159 PF01025 GrpE HME7025_01160 PF08331 Domain of unknown function (DUF1730) HME7025_01162 PF00512 His Kinase A (phospho-acceptor) domain HME7025_01162 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01162 PF00072 Response regulator receiver domain HME7025_01162 PF08448 PAS fold HME7025_01162 PF13426 PAS domain HME7025_01169 PF17092 Penicillin-binding protein OB-like domain HME7025_01169 PF00912 Transglycosylase HME7025_01169 PF00905 Penicillin binding protein transpeptidase domain HME7025_01170 PF01218 Coproporphyrinogen III oxidase HME7025_01173 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HME7025_01178 PF12705 PD-(D/E)XK nuclease superfamily HME7025_01180 PF10396 GTP-binding protein TrmE N-terminus HME7025_01180 PF12631 MnmE helical domain HME7025_01180 PF01926 50S ribosome-binding GTPase HME7025_01182 PF02899 Phage integrase, N-terminal SAM-like domain HME7025_01182 PF00589 Phage integrase family HME7025_01193 PF00873 AcrB/AcrD/AcrF family HME7025_01196 PF00440 Bacterial regulatory proteins, tetR family HME7025_01200 PF00543 Nitrogen regulatory protein P-II HME7025_01201 PF00909 Ammonium Transporter Family HME7025_01202 PF00728 Glycosyl hydrolase family 20, catalytic domain HME7025_01202 PF02838 Glycosyl hydrolase family 20, domain 2 HME7025_01202 PF07691 PA14 domain HME7025_01204 PF01223 DNA/RNA non-specific endonuclease HME7025_01205 PF07470 Glycosyl Hydrolase Family 88 HME7025_01206 PF04962 KduI/IolB family HME7025_01210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HME7025_01212 PF01212 Beta-eliminating lyase HME7025_01213 PF05336 L-rhamnose mutarotase HME7025_01223 PF01037 Lrp/AsnC ligand binding domain HME7025_01225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HME7025_01225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HME7025_01227 PF07690 Major Facilitator Superfamily HME7025_01228 PF00529 HlyD membrane-fusion protein of T1SS HME7025_01228 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HME7025_01229 PF01047 MarR family HME7025_01232 PF00425 chorismate binding enzyme HME7025_01233 PF02272 DHHA1 domain HME7025_01233 PF01411 tRNA synthetases class II (A) HME7025_01233 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HME7025_01235 PF02481 DNA recombination-mediator protein A HME7025_01235 PF17782 DprA winged helix domain HME7025_01236 PF00156 Phosphoribosyl transferase domain HME7025_01238 PF01467 Cytidylyltransferase-like HME7025_01240 PF00005 ABC transporter HME7025_01240 PF12848 ABC transporter HME7025_01241 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01241 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_01242 PF00171 Aldehyde dehydrogenase family HME7025_01246 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HME7025_01247 PF02547 Queuosine biosynthesis protein HME7025_01248 PF03441 FAD binding domain of DNA photolyase HME7025_01248 PF00875 DNA photolyase HME7025_01250 PF00154 recA bacterial DNA recombination protein HME7025_01251 PF00308 Bacterial dnaA protein HME7025_01251 PF11638 DnaA N-terminal domain HME7025_01251 PF08299 Bacterial dnaA protein helix-turn-helix HME7025_01253 PF00781 Diacylglycerol kinase catalytic domain HME7025_01254 PF01575 MaoC like domain HME7025_01256 PF00155 Aminotransferase class I and II HME7025_01259 PF00854 POT family HME7025_01260 PF13614 AAA domain HME7025_01261 PF02195 ParB-like nuclease domain HME7025_01261 PF17762 HTH domain found in ParB protein HME7025_01263 PF05173 Dihydrodipicolinate reductase, C-terminus HME7025_01263 PF01113 Dihydrodipicolinate reductase, N-terminus HME7025_01265 PF10502 Signal peptidase, peptidase S26 HME7025_01266 PF10672 S-adenosylmethionine-dependent methyltransferase HME7025_01266 PF17785 PUA-like domain HME7025_01268 PF01649 Ribosomal protein S20 HME7025_01269 PF04002 RadC-like JAB domain HME7025_01271 PF00475 Imidazoleglycerol-phosphate dehydratase HME7025_01271 PF08645 Polynucleotide kinase 3 phosphatase HME7025_01273 PF00270 DEAD/DEAH box helicase HME7025_01273 PF00271 Helicase conserved C-terminal domain HME7025_01275 PF04379 ApaG domain HME7025_01276 PF03167 Uracil DNA glycosylase superfamily HME7025_01278 PF01565 FAD binding domain HME7025_01278 PF13183 4Fe-4S dicluster domain HME7025_01278 PF02913 FAD linked oxidases, C-terminal domain HME7025_01279 PF02687 FtsX-like permease family HME7025_01279 PF12704 MacB-like periplasmic core domain HME7025_01279 PF00005 ABC transporter HME7025_01280 PF00056 lactate/malate dehydrogenase, NAD binding domain HME7025_01280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HME7025_01283 PF01425 Amidase HME7025_01284 PF01476 LysM domain HME7025_01284 PF00877 NlpC/P60 family HME7025_01285 PF01330 RuvA N terminal domain HME7025_01285 PF07499 RuvA, C-terminal domain HME7025_01287 PF01597 Glycine cleavage H-protein HME7025_01288 PF01979 Amidohydrolase family HME7025_01292 PF00005 ABC transporter HME7025_01293 PF00132 Bacterial transferase hexapeptide (six repeats) HME7025_01293 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HME7025_01294 PF07977 FabA-like domain HME7025_01294 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HME7025_01295 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HME7025_01295 PF00132 Bacterial transferase hexapeptide (six repeats) HME7025_01296 PF01966 HD domain HME7025_01300 PF04030 D-arabinono-1,4-lactone oxidase HME7025_01300 PF01565 FAD binding domain HME7025_01301 PF01011 PQQ enzyme repeat HME7025_01302 PF06379 L-rhamnose-proton symport protein (RhaT) HME7025_01304 PF00330 Aconitase family (aconitate hydratase) HME7025_01305 PF00694 Aconitase C-terminal domain HME7025_01306 PF00682 HMGL-like HME7025_01306 PF08502 LeuA allosteric (dimerisation) domain HME7025_01307 PF00180 Isocitrate/isopropylmalate dehydrogenase HME7025_01309 PF07676 WD40-like Beta Propeller Repeat HME7025_01309 PF00326 Prolyl oligopeptidase family HME7025_01310 PF05343 M42 glutamyl aminopeptidase HME7025_01311 PF00365 Phosphofructokinase HME7025_01312 PF02698 DUF218 domain HME7025_01315 PF03330 Lytic transglycolase HME7025_01317 PF01926 50S ribosome-binding GTPase HME7025_01317 PF06071 Protein of unknown function (DUF933) HME7025_01320 PF01645 Conserved region in glutamate synthase HME7025_01321 PF02615 Malate/L-lactate dehydrogenase HME7025_01322 PF02618 YceG-like family HME7025_01325 PF01300 Telomere recombination HME7025_01328 PF10431 C-terminal, D2-small domain, of ClpB protein HME7025_01328 PF17871 AAA lid domain HME7025_01328 PF02861 Clp amino terminal domain, pathogenicity island component HME7025_01328 PF00004 ATPase family associated with various cellular activities (AAA) HME7025_01328 PF07724 AAA domain (Cdc48 subfamily) HME7025_01332 PF00886 Ribosomal protein S16 HME7025_01333 PF01782 RimM N-terminal domain HME7025_01333 PF05239 PRC-barrel domain HME7025_01334 PF01746 tRNA (Guanine-1)-methyltransferase HME7025_01335 PF00892 EamA-like transporter family HME7025_01336 PF13472 GDSL-like Lipase/Acylhydrolase family HME7025_01336 PF07859 alpha/beta hydrolase fold HME7025_01337 PF13520 Amino acid permease HME7025_01339 PF07715 TonB-dependent Receptor Plug Domain HME7025_01339 PF00593 TonB dependent receptor HME7025_01342 PF00753 Metallo-beta-lactamase superfamily HME7025_01342 PF10996 Beta-Casp domain HME7025_01342 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HME7025_01343 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HME7025_01344 PF13419 Haloacid dehalogenase-like hydrolase HME7025_01345 PF01553 Acyltransferase HME7025_01346 PF02684 Lipid-A-disaccharide synthetase HME7025_01348 PF01370 NAD dependent epimerase/dehydratase family HME7025_01349 PF00535 Glycosyl transferase family 2 HME7025_01349 PF02709 N-terminal domain of galactosyltransferase HME7025_01350 PF00202 Aminotransferase class-III HME7025_01351 PF14849 YidC periplasmic domain HME7025_01351 PF02096 60Kd inner membrane protein HME7025_01352 PF00117 Glutamine amidotransferase class-I HME7025_01352 PF06418 CTP synthase N-terminus HME7025_01353 PF12705 PD-(D/E)XK nuclease superfamily HME7025_01353 PF00580 UvrD/REP helicase N-terminal domain HME7025_01353 PF13361 UvrD-like helicase C-terminal domain HME7025_01355 PF03435 Saccharopine dehydrogenase NADP binding domain HME7025_01355 PF16653 Saccharopine dehydrogenase C-terminal domain HME7025_01356 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HME7025_01359 PF00155 Aminotransferase class I and II HME7025_01360 PF00815 Histidinol dehydrogenase HME7025_01361 PF01634 ATP phosphoribosyltransferase HME7025_01361 PF08029 HisG, C-terminal domain HME7025_01362 PF00364 Biotin-requiring enzyme HME7025_01362 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HME7025_01362 PF02817 e3 binding domain HME7025_01363 PF03144 Elongation factor Tu domain 2 HME7025_01363 PF00009 Elongation factor Tu GTP binding domain HME7025_01363 PF06421 GTP-binding protein LepA C-terminus HME7025_01363 PF00679 Elongation factor G C-terminus HME7025_01364 PF00557 Metallopeptidase family M24 HME7025_01364 PF05195 Aminopeptidase P, N-terminal domain HME7025_01365 PF01209 ubiE/COQ5 methyltransferase family HME7025_01368 PF13393 Histidyl-tRNA synthetase HME7025_01368 PF03129 Anticodon binding domain HME7025_01369 PF00342 Phosphoglucose isomerase HME7025_01371 PF00578 AhpC/TSA family HME7025_01371 PF10417 C-terminal domain of 1-Cys peroxiredoxin HME7025_01373 PF01458 Uncharacterized protein family (UPF0051) HME7025_01375 PF01479 S4 domain HME7025_01375 PF00849 RNA pseudouridylate synthase HME7025_01377 PF00083 Sugar (and other) transporter HME7025_01378 PF07690 Major Facilitator Superfamily HME7025_01379 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HME7025_01380 PF00118 TCP-1/cpn60 chaperonin family HME7025_01381 PF00166 Chaperonin 10 Kd subunit HME7025_01385 PF00158 Sigma-54 interaction domain HME7025_01385 PF02954 Bacterial regulatory protein, Fis family HME7025_01385 PF01590 GAF domain HME7025_01386 PF01938 TRAM domain HME7025_01386 PF00919 Uncharacterized protein family UPF0004 HME7025_01386 PF04055 Radical SAM superfamily HME7025_01387 PF00005 ABC transporter HME7025_01388 PF08442 ATP-grasp domain HME7025_01388 PF00549 CoA-ligase HME7025_01389 PF01557 Fumarylacetoacetate (FAA) hydrolase family HME7025_01390 PF00578 AhpC/TSA family HME7025_01391 PF00456 Transketolase, thiamine diphosphate binding domain HME7025_01392 PF02780 Transketolase, C-terminal domain HME7025_01392 PF02779 Transketolase, pyrimidine binding domain HME7025_01394 PF08032 RNA 2'-O ribose methyltransferase substrate binding HME7025_01394 PF00588 SpoU rRNA Methylase family HME7025_01396 PF00155 Aminotransferase class I and II HME7025_01399 PF01259 SAICAR synthetase HME7025_01401 PF01493 GXGXG motif HME7025_01401 PF00310 Glutamine amidotransferases class-II HME7025_01401 PF04898 Glutamate synthase central domain HME7025_01401 PF01645 Conserved region in glutamate synthase HME7025_01402 PF07992 Pyridine nucleotide-disulphide oxidoreductase HME7025_01402 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HME7025_01407 PF13579 Glycosyl transferase 4-like domain HME7025_01407 PF00534 Glycosyl transferases group 1 HME7025_01408 PF13439 Glycosyltransferase Family 4 HME7025_01408 PF00534 Glycosyl transferases group 1 HME7025_01409 PF00535 Glycosyl transferase family 2 HME7025_01410 PF00132 Bacterial transferase hexapeptide (six repeats) HME7025_01411 PF00953 Glycosyl transferase family 4 HME7025_01412 PF00534 Glycosyl transferases group 1 HME7025_01412 PF13439 Glycosyltransferase Family 4 HME7025_01413 PF00800 Prephenate dehydratase HME7025_01413 PF01817 Chorismate mutase type II HME7025_01413 PF01842 ACT domain HME7025_01414 PF06574 FAD synthetase HME7025_01414 PF01687 Riboflavin kinase HME7025_01415 PF01509 TruB family pseudouridylate synthase (N terminal domain) HME7025_01416 PF02673 Bacitracin resistance protein BacA HME7025_01418 PF18075 FtsX extracellular domain HME7025_01419 PF02577 Bifunctional nuclease HME7025_01420 PF00766 Electron transfer flavoprotein FAD-binding domain HME7025_01420 PF01012 Electron transfer flavoprotein domain HME7025_01421 PF01012 Electron transfer flavoprotein domain HME7025_01423 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01423 PF01751 Toprim domain HME7025_01423 PF00204 DNA gyrase B HME7025_01423 PF00986 DNA gyrase B subunit, carboxyl terminus HME7025_01427 PF00005 ABC transporter HME7025_01427 PF14524 Wzt C-terminal domain HME7025_01428 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HME7025_01431 PF12704 MacB-like periplasmic core domain HME7025_01431 PF02687 FtsX-like permease family HME7025_01433 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HME7025_01433 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HME7025_01434 PF08402 TOBE domain HME7025_01434 PF00005 ABC transporter HME7025_01435 PF01026 TatD related DNase HME7025_01436 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain HME7025_01436 PF01522 Polysaccharide deacetylase HME7025_01437 PF02075 Crossover junction endodeoxyribonuclease RuvC HME7025_01438 PF03190 Protein of unknown function, DUF255 HME7025_01441 PF00521 DNA gyrase/topoisomerase IV, subunit A HME7025_01443 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HME7025_01443 PF03466 LysR substrate binding domain HME7025_01444 PF00578 AhpC/TSA family HME7025_01445 PF02627 Carboxymuconolactone decarboxylase family HME7025_01447 PF00535 Glycosyl transferase family 2 HME7025_01448 PF01757 Acyltransferase family HME7025_01449 PF00691 OmpA family HME7025_01450 PF00834 Ribulose-phosphate 3 epimerase family HME7025_01451 PF00533 BRCA1 C Terminus (BRCT) domain HME7025_01451 PF01653 NAD-dependent DNA ligase adenylation domain HME7025_01451 PF03120 NAD-dependent DNA ligase OB-fold domain HME7025_01451 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HME7025_01451 PF12826 Helix-hairpin-helix motif HME7025_01452 PF00701 Dihydrodipicolinate synthetase family HME7025_01457 PF07690 Major Facilitator Superfamily HME7025_01459 PF08666 SAF domain HME7025_01459 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus HME7025_01462 PF01557 Fumarylacetoacetate (FAA) hydrolase family HME7025_01468 PF00920 Dehydratase family HME7025_01470 PF00155 Aminotransferase class I and II HME7025_01473 PF13419 Haloacid dehalogenase-like hydrolase HME7025_01474 PF03632 Glycosyl hydrolase family 65 central catalytic domain HME7025_01474 PF03633 Glycosyl hydrolase family 65, C-terminal domain HME7025_01474 PF03636 Glycosyl hydrolase family 65, N-terminal domain HME7025_01476 PF00012 Hsp70 protein HME7025_01477 PF13478 XdhC Rossmann domain HME7025_01477 PF02625 XdhC and CoxI family HME7025_01478 PF00266 Aminotransferase class-V HME7025_01479 PF00453 Ribosomal protein L20 HME7025_01480 PF01632 Ribosomal protein L35 HME7025_01481 PF05198 Translation initiation factor IF-3, N-terminal domain HME7025_01481 PF00707 Translation initiation factor IF-3, C-terminal domain HME7025_01482 PF02824 TGS domain HME7025_01482 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HME7025_01482 PF03129 Anticodon binding domain HME7025_01482 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HME7025_01485 PF00171 Aldehyde dehydrogenase family HME7025_01487 PF00501 AMP-binding enzyme HME7025_01487 PF13193 AMP-binding enzyme C-terminal domain HME7025_01489 PF00378 Enoyl-CoA hydratase/isomerase HME7025_01492 PF01170 Putative RNA methylase family UPF0020 HME7025_01492 PF02926 THUMP domain HME7025_01492 PF10672 S-adenosylmethionine-dependent methyltransferase HME7025_01493 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HME7025_01493 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HME7025_01494 PF13368 Topoisomerase C-terminal repeat HME7025_01494 PF01751 Toprim domain HME7025_01494 PF01131 DNA topoisomerase HME7025_01496 PF00330 Aconitase family (aconitate hydratase) HME7025_01496 PF00694 Aconitase C-terminal domain HME7025_01497 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HME7025_01497 PF14572 Phosphoribosyl synthetase-associated domain HME7025_01498 PF14693 Ribosomal protein TL5, C-terminal domain HME7025_01498 PF01386 Ribosomal L25p family HME7025_01499 PF03030 Inorganic H+ pyrophosphatase HME7025_01501 PF00202 Aminotransferase class-III HME7025_01502 PF00085 Thioredoxin HME7025_01503 PF14579 Helix-hairpin-helix motif HME7025_01503 PF02811 PHP domain HME7025_01503 PF01336 OB-fold nucleic acid binding domain HME7025_01503 PF07733 Bacterial DNA polymerase III alpha NTPase domain HME7025_01503 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HME7025_01505 PF00579 tRNA synthetases class I (W and Y) HME7025_01506 PF01569 PAP2 superfamily HME7025_01508 PF00037 4Fe-4S binding domain HME7025_01510 PF00909 Ammonium Transporter Family HME7025_01511 PF04055 Radical SAM superfamily HME7025_01511 PF01938 TRAM domain HME7025_01511 PF00919 Uncharacterized protein family UPF0004 HME7025_01512 PF00120 Glutamine synthetase, catalytic domain HME7025_01512 PF03951 Glutamine synthetase, beta-Grasp domain HME7025_01513 PF12437 Glutamine synthetase type III N terminal HME7025_01513 PF18318 Glutamine synthetase C-terminal domain HME7025_01513 PF00120 Glutamine synthetase, catalytic domain HME7025_01515 PF04452 RNA methyltransferase HME7025_01518 PF02817 e3 binding domain HME7025_01518 PF00364 Biotin-requiring enzyme HME7025_01518 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HME7025_01519 PF18146 Damage-inducible protein CinA KH domain HME7025_01519 PF02464 Competence-damaged protein HME7025_01519 PF00994 Probable molybdopterin binding domain HME7025_01522 PF04551 GcpE protein HME7025_01523 PF07690 Major Facilitator Superfamily HME7025_01524 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01525 PF01242 6-pyruvoyl tetrahydropterin synthase HME7025_01526 PF01227 GTP cyclohydrolase I HME7025_01528 PF01545 Cation efflux family HME7025_01528 PF16916 Dimerisation domain of Zinc Transporter HME7025_01529 PF00293 NUDIX domain HME7025_01530 PF01975 Survival protein SurE HME7025_01532 PF01048 Phosphorylase superfamily HME7025_01534 PF00144 Beta-lactamase HME7025_01538 PF05726 Pirin C-terminal cupin domain HME7025_01538 PF02678 Pirin HME7025_01539 PF13673 Acetyltransferase (GNAT) domain HME7025_01540 PF02562 PhoH-like protein HME7025_01541 PF03796 DnaB-like helicase C terminal domain HME7025_01541 PF14528 LAGLIDADG-like domain HME7025_01541 PF14528 LAGLIDADG-like domain HME7025_01541 PF00772 DnaB-like helicase N terminal domain HME7025_01541 PF00772 DnaB-like helicase N terminal domain HME7025_01541 PF03796 DnaB-like helicase C terminal domain HME7025_01542 PF01938 TRAM domain HME7025_01542 PF05958 tRNA (Uracil-5-)-methyltransferase HME7025_01543 PF00106 short chain dehydrogenase HME7025_01545 PF00403 Heavy-metal-associated domain HME7025_01547 PF00115 Cytochrome C and Quinol oxidase polypeptide I HME7025_01549 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HME7025_01549 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HME7025_01549 PF00034 Cytochrome c HME7025_01551 PF13746 4Fe-4S dicluster domain HME7025_01551 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HME7025_01551 PF12801 4Fe-4S binding domain HME7025_01553 PF02683 Cytochrome C biogenesis protein transmembrane region HME7025_01553 PF11412 Disulphide bond corrector protein DsbC HME7025_01554 PF00072 Response regulator receiver domain HME7025_01554 PF00486 Transcriptional regulatory protein, C terminal HME7025_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01555 PF00512 His Kinase A (phospho-acceptor) domain HME7025_01555 PF00989 PAS fold HME7025_01556 PF01804 Penicillin amidase HME7025_01559 PF01740 STAS domain HME7025_01559 PF00916 Sulfate permease family HME7025_01560 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HME7025_01561 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HME7025_01561 PF00361 Proton-conducting membrane transporter HME7025_01563 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_01563 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01566 PF01804 Penicillin amidase HME7025_01567 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HME7025_01567 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HME7025_01569 PF02770 Acyl-CoA dehydrogenase, middle domain HME7025_01569 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HME7025_01569 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HME7025_01571 PF00107 Zinc-binding dehydrogenase HME7025_01571 PF08240 Alcohol dehydrogenase GroES-like domain HME7025_01574 PF00884 Sulfatase HME7025_01580 PF07690 Major Facilitator Superfamily HME7025_01581 PF08240 Alcohol dehydrogenase GroES-like domain HME7025_01581 PF00107 Zinc-binding dehydrogenase HME7025_01583 PF00529 HlyD membrane-fusion protein of T1SS HME7025_01583 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HME7025_01584 PF00873 AcrB/AcrD/AcrF family HME7025_01585 PF02321 Outer membrane efflux protein HME7025_01588 PF08267 Cobalamin-independent synthase, N-terminal domain HME7025_01588 PF01717 Cobalamin-independent synthase, Catalytic domain HME7025_01592 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HME7025_01593 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HME7025_01594 PF01541 GIY-YIG catalytic domain HME7025_01598 PF00312 Ribosomal protein S15 HME7025_01599 PF03725 3' exoribonuclease family, domain 2 HME7025_01599 PF00575 S1 RNA binding domain HME7025_01599 PF00013 KH domain HME7025_01599 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HME7025_01599 PF01138 3' exoribonuclease family, domain 1 HME7025_01600 PF04545 Sigma-70, region 4 HME7025_01600 PF04539 Sigma-70 region 3 HME7025_01600 PF03979 Sigma-70 factor, region 1.1 HME7025_01600 PF00140 Sigma-70 factor, region 1.2 HME7025_01600 PF04542 Sigma-70 region 2 HME7025_01601 PF16582 Middle domain of thiamine pyrophosphate HME7025_01601 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HME7025_01603 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HME7025_01610 PF08245 Mur ligase middle domain HME7025_01610 PF02875 Mur ligase family, glutamate ligase domain HME7025_01611 PF02390 Putative methyltransferase HME7025_01612 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HME7025_01612 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HME7025_01613 PF00132 Bacterial transferase hexapeptide (six repeats) HME7025_01613 PF14602 Hexapeptide repeat of succinyl-transferase HME7025_01613 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HME7025_01614 PF17783 CvfB-like winged helix domain HME7025_01614 PF13509 S1 domain HME7025_01617 PF00072 Response regulator receiver domain HME7025_01617 PF00486 Transcriptional regulatory protein, C terminal HME7025_01618 PF00512 His Kinase A (phospho-acceptor) domain HME7025_01618 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01618 PF00672 HAMP domain HME7025_01622 PF03989 DNA gyrase C-terminal domain, beta-propeller HME7025_01622 PF00521 DNA gyrase/topoisomerase IV, subunit A HME7025_01624 PF00356 Bacterial regulatory proteins, lacI family HME7025_01625 PF02152 Dihydroneopterin aldolase HME7025_01626 PF05103 DivIVA protein HME7025_01629 PF13369 Transglutaminase-like superfamily HME7025_01630 PF16363 GDP-mannose 4,6 dehydratase HME7025_01631 PF16363 GDP-mannose 4,6 dehydratase HME7025_01632 PF00483 Nucleotidyl transferase HME7025_01635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HME7025_01635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HME7025_01636 PF02132 RecR protein HME7025_01636 PF13662 Toprim domain HME7025_01638 PF00474 Sodium:solute symporter family HME7025_01639 PF04264 YceI-like domain HME7025_01651 PF08000 Bacterial PH domain HME7025_01655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HME7025_01655 PF02806 Alpha amylase, C-terminal all-beta domain HME7025_01655 PF00128 Alpha amylase, catalytic domain HME7025_01657 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HME7025_01658 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HME7025_01659 PF00156 Phosphoribosyl transferase domain HME7025_01660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HME7025_01660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HME7025_01662 PF05193 Peptidase M16 inactive domain HME7025_01662 PF00675 Insulinase (Peptidase family M16) HME7025_01663 PF06969 HemN C-terminal domain HME7025_01663 PF04055 Radical SAM superfamily HME7025_01664 PF00912 Transglycosylase HME7025_01665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HME7025_01665 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HME7025_01667 PF01476 LysM domain HME7025_01667 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HME7025_01668 PF01596 O-methyltransferase HME7025_01673 PF08032 RNA 2'-O ribose methyltransferase substrate binding HME7025_01673 PF00588 SpoU rRNA Methylase family HME7025_01674 PF00106 short chain dehydrogenase HME7025_01675 PF01195 Peptidyl-tRNA hydrolase HME7025_01677 PF08264 Anticodon-binding domain of tRNA HME7025_01677 PF09334 tRNA synthetases class I (M) HME7025_01677 PF01588 Putative tRNA binding domain HME7025_01678 PF01165 Ribosomal protein S21 HME7025_01679 PF02899 Phage integrase, N-terminal SAM-like domain HME7025_01679 PF00589 Phage integrase family HME7025_01680 PF00288 GHMP kinases N terminal domain HME7025_01680 PF08544 GHMP kinases C terminal HME7025_01681 PF00696 Amino acid kinase family HME7025_01681 PF00742 Homoserine dehydrogenase HME7025_01681 PF03447 Homoserine dehydrogenase, NAD binding domain HME7025_01682 PF04239 Protein of unknown function (DUF421) HME7025_01683 PF02472 Biopolymer transport protein ExbD/TolR HME7025_01685 PF01761 3-dehydroquinate synthase HME7025_01685 PF02541 Ppx/GppA phosphatase family HME7025_01687 PF00675 Insulinase (Peptidase family M16) HME7025_01687 PF05193 Peptidase M16 inactive domain HME7025_01688 PF06491 Disulphide isomerase HME7025_01689 PF01883 Iron-sulfur cluster assembly protein HME7025_01690 PF02657 Fe-S metabolism associated domain HME7025_01691 PF00266 Aminotransferase class-V HME7025_01692 PF01458 Uncharacterized protein family (UPF0051) HME7025_01693 PF00005 ABC transporter HME7025_01694 PF01521 Iron-sulphur cluster biosynthesis HME7025_01695 PF02545 Maf-like protein HME7025_01697 PF04264 YceI-like domain HME7025_01698 PF00881 Nitroreductase family HME7025_01699 PF13735 tRNA nucleotidyltransferase domain 2 putative HME7025_01699 PF12627 Probable RNA and SrmB- binding site of polymerase A HME7025_01699 PF01743 Poly A polymerase head domain HME7025_01700 PF01300 Telomere recombination HME7025_01701 PF00750 tRNA synthetases class I (R) HME7025_01701 PF03485 Arginyl tRNA synthetase N terminal domain HME7025_01701 PF05746 DALR anticodon binding domain HME7025_01702 PF00255 Glutathione peroxidase HME7025_01703 PF01040 UbiA prenyltransferase family HME7025_01707 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase HME7025_01708 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HME7025_01708 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HME7025_01708 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HME7025_01709 PF01370 NAD dependent epimerase/dehydratase family HME7025_01710 PF00593 TonB dependent receptor HME7025_01711 PF00586 AIR synthase related protein, N-terminal domain HME7025_01711 PF02769 AIR synthase related protein, C-terminal domain HME7025_01712 PF00561 alpha/beta hydrolase fold HME7025_01713 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HME7025_01714 PF00753 Metallo-beta-lactamase superfamily HME7025_01715 PF01066 CDP-alcohol phosphatidyltransferase HME7025_01716 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HME7025_01719 PF02219 Methylenetetrahydrofolate reductase HME7025_01720 PF02574 Homocysteine S-methyltransferase HME7025_01720 PF00809 Pterin binding enzyme HME7025_01720 PF02965 Vitamin B12 dependent methionine synthase, activation domain HME7025_01720 PF02607 B12 binding domain HME7025_01720 PF02310 B12 binding domain HME7025_01721 PF02348 Cytidylyltransferase HME7025_01723 PF01476 LysM domain HME7025_01723 PF17961 Bacterial Ig domain HME7025_01723 PF05737 Collagen binding domain HME7025_01727 PF02541 Ppx/GppA phosphatase family HME7025_01729 PF00158 Sigma-54 interaction domain HME7025_01729 PF00072 Response regulator receiver domain HME7025_01729 PF02954 Bacterial regulatory protein, Fis family HME7025_01730 PF00005 ABC transporter HME7025_01731 PF00923 Transaldolase/Fructose-6-phosphate aldolase HME7025_01736 PF07690 Major Facilitator Superfamily HME7025_01739 PF00364 Biotin-requiring enzyme HME7025_01739 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HME7025_01739 PF00682 HMGL-like HME7025_01739 PF02785 Biotin carboxylase C-terminal domain HME7025_01739 PF00289 Biotin carboxylase, N-terminal domain HME7025_01739 PF02436 Conserved carboxylase domain HME7025_01740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HME7025_01741 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HME7025_01741 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HME7025_01742 PF00488 MutS domain V HME7025_01742 PF01713 Smr domain HME7025_01743 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HME7025_01745 PF03755 YicC-like family, N-terminal region HME7025_01745 PF08340 Domain of unknown function (DUF1732) HME7025_01748 PF00762 Ferrochelatase HME7025_01751 PF00146 NADH dehydrogenase HME7025_01752 PF01053 Cys/Met metabolism PLP-dependent enzyme HME7025_01756 PF00581 Rhodanese-like domain HME7025_01766 PF00557 Metallopeptidase family M24 HME7025_01771 PF00474 Sodium:solute symporter family HME7025_01773 PF09186 Domain of unknown function (DUF1949) HME7025_01773 PF01205 Uncharacterized protein family UPF0029 HME7025_01774 PF01557 Fumarylacetoacetate (FAA) hydrolase family HME7025_01775 PF00171 Aldehyde dehydrogenase family HME7025_01776 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HME7025_01778 PF07724 AAA domain (Cdc48 subfamily) HME7025_01778 PF10431 C-terminal, D2-small domain, of ClpB protein HME7025_01778 PF02861 Clp amino terminal domain, pathogenicity island component HME7025_01778 PF17871 AAA lid domain HME7025_01778 PF00004 ATPase family associated with various cellular activities (AAA) HME7025_01779 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01779 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HME7025_01779 PF00512 His Kinase A (phospho-acceptor) domain HME7025_01779 PF01627 Hpt domain HME7025_01779 PF00672 HAMP domain HME7025_01779 PF00072 Response regulator receiver domain HME7025_01780 PF00398 Ribosomal RNA adenine dimethylase HME7025_01781 PF03448 MgtE intracellular N domain HME7025_01781 PF01769 Divalent cation transporter HME7025_01781 PF00571 CBS domain HME7025_01782 PF02580 D-Tyr-tRNA(Tyr) deacylase HME7025_01783 PF03819 MazG nucleotide pyrophosphohydrolase domain HME7025_01784 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HME7025_01784 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HME7025_01786 PF02447 GntP family permease HME7025_01794 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01794 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_01796 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HME7025_01797 PF01979 Amidohydrolase family HME7025_01800 PF07690 Major Facilitator Superfamily HME7025_01801 PF00593 TonB dependent receptor HME7025_01801 PF07715 TonB-dependent Receptor Plug Domain HME7025_01803 PF07715 TonB-dependent Receptor Plug Domain HME7025_01803 PF00593 TonB dependent receptor HME7025_01808 PF18764 Nitrous oxide reductase propeller repeat HME7025_01808 PF18793 Nitrous oxide reductase propeller repeat 2 HME7025_01808 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HME7025_01809 PF02469 Fasciclin domain HME7025_01812 PF00005 ABC transporter HME7025_01816 PF00512 His Kinase A (phospho-acceptor) domain HME7025_01816 PF00072 Response regulator receiver domain HME7025_01816 PF09308 LuxQ, periplasmic HME7025_01816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01821 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01821 PF00512 His Kinase A (phospho-acceptor) domain HME7025_01821 PF09308 LuxQ, periplasmic HME7025_01821 PF00072 Response regulator receiver domain HME7025_01823 PF00378 Enoyl-CoA hydratase/isomerase HME7025_01825 PF04552 Sigma-54, DNA binding domain HME7025_01825 PF00309 Sigma-54 factor, Activator interacting domain (AID) HME7025_01825 PF04963 Sigma-54 factor, core binding domain HME7025_01826 PF01336 OB-fold nucleic acid binding domain HME7025_01826 PF00152 tRNA synthetases class II (D, K and N) HME7025_01827 PF01219 Prokaryotic diacylglycerol kinase HME7025_01829 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HME7025_01830 PF01554 MatE HME7025_01831 PF00754 F5/8 type C domain HME7025_01831 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase HME7025_01831 PF13088 BNR repeat-like domain HME7025_01832 PF01741 Large-conductance mechanosensitive channel, MscL HME7025_01833 PF07992 Pyridine nucleotide-disulphide oxidoreductase HME7025_01833 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HME7025_01834 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HME7025_01834 PF00364 Biotin-requiring enzyme HME7025_01834 PF02817 e3 binding domain HME7025_01835 PF00676 Dehydrogenase E1 component HME7025_01835 PF16078 2-oxoglutarate dehydrogenase N-terminus HME7025_01835 PF16870 2-oxoglutarate dehydrogenase C-terminal HME7025_01835 PF02779 Transketolase, pyrimidine binding domain HME7025_01838 PF00183 Hsp90 protein HME7025_01838 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01841 PF11734 TilS substrate C-terminal domain HME7025_01841 PF01171 PP-loop family HME7025_01842 PF00364 Biotin-requiring enzyme HME7025_01842 PF00561 alpha/beta hydrolase fold HME7025_01846 PF02581 Thiamine monophosphate synthase HME7025_01847 PF00586 AIR synthase related protein, N-terminal domain HME7025_01847 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HME7025_01847 PF02769 AIR synthase related protein, C-terminal domain HME7025_01848 PF08241 Methyltransferase domain HME7025_01852 PF00005 ABC transporter HME7025_01852 PF00664 ABC transporter transmembrane region HME7025_01854 PF00459 Inositol monophosphatase family HME7025_01855 PF17804 Tail specific protease N-terminal domain HME7025_01855 PF03572 Peptidase family S41 HME7025_01855 PF00595 PDZ domain HME7025_01855 PF11818 C-terminal domain of tail specific protease (DUF3340) HME7025_01856 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HME7025_01856 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HME7025_01857 PF00306 ATP synthase alpha/beta chain, C terminal domain HME7025_01857 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HME7025_01857 PF02874 ATP synthase alpha/beta family, beta-barrel domain HME7025_01858 PF00231 ATP synthase HME7025_01860 PF16360 GTP-binding GTPase Middle Region HME7025_01860 PF13167 GTP-binding GTPase N-terminal HME7025_01860 PF01926 50S ribosome-binding GTPase HME7025_01871 PF01144 Coenzyme A transferase HME7025_01872 PF13520 Amino acid permease HME7025_01873 PF00120 Glutamine synthetase, catalytic domain HME7025_01874 PF00465 Iron-containing alcohol dehydrogenase HME7025_01875 PF07722 Peptidase C26 HME7025_01876 PF00171 Aldehyde dehydrogenase family HME7025_01878 PF08240 Alcohol dehydrogenase GroES-like domain HME7025_01878 PF00107 Zinc-binding dehydrogenase HME7025_01881 PF00005 ABC transporter HME7025_01882 PF01757 Acyltransferase family HME7025_01883 PF00034 Cytochrome c HME7025_01883 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HME7025_01883 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HME7025_01884 PF00111 2Fe-2S iron-sulfur cluster binding domain HME7025_01884 PF01799 [2Fe-2S] binding domain HME7025_01886 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_01886 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01887 PF02589 LUD domain HME7025_01888 PF13183 4Fe-4S dicluster domain HME7025_01888 PF02589 LUD domain HME7025_01888 PF11870 Domain of unknown function (DUF3390) HME7025_01889 PF02754 Cysteine-rich domain HME7025_01891 PF01261 Xylose isomerase-like TIM barrel HME7025_01892 PF00596 Class II Aldolase and Adducin N-terminal domain HME7025_01895 PF16193 AAA C-terminal domain HME7025_01895 PF00004 ATPase family associated with various cellular activities (AAA) HME7025_01895 PF12002 MgsA AAA+ ATPase C terminal HME7025_01897 PF01967 MoaC family HME7025_01898 PF00994 Probable molybdopterin binding domain HME7025_01898 PF03454 MoeA C-terminal region (domain IV) HME7025_01898 PF03453 MoeA N-terminal region (domain I and II) HME7025_01899 PF13378 Enolase C-terminal domain-like HME7025_01899 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain HME7025_01901 PF01790 Prolipoprotein diacylglyceryl transferase HME7025_01907 PF00535 Glycosyl transferase family 2 HME7025_01907 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 HME7025_01909 PF01261 Xylose isomerase-like TIM barrel HME7025_01910 PF01022 Bacterial regulatory protein, arsR family HME7025_01914 PF00111 2Fe-2S iron-sulfur cluster binding domain HME7025_01914 PF03473 MOSC domain HME7025_01914 PF03476 MOSC N-terminal beta barrel domain HME7025_01916 PF00005 ABC transporter HME7025_01916 PF00664 ABC transporter transmembrane region HME7025_01917 PF01029 NusB family HME7025_01920 PF02699 Preprotein translocase subunit HME7025_01921 PF01121 Dephospho-CoA kinase HME7025_01922 PF12169 DNA polymerase III subunits gamma and tau domain III HME7025_01931 PF02224 Cytidylate kinase HME7025_01932 PF00561 alpha/beta hydrolase fold HME7025_01934 PF07724 AAA domain (Cdc48 subfamily) HME7025_01934 PF10431 C-terminal, D2-small domain, of ClpB protein HME7025_01934 PF06689 ClpX C4-type zinc finger HME7025_01935 PF00574 Clp protease HME7025_01936 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HME7025_01936 PF05697 Bacterial trigger factor protein (TF) HME7025_01936 PF05698 Bacterial trigger factor protein (TF) C-terminus HME7025_01939 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HME7025_01941 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_01941 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01942 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01942 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_01944 PF01807 CHC2 zinc finger HME7025_01944 PF08275 DNA primase catalytic core, N-terminal domain HME7025_01944 PF10410 DnaB-helicase binding domain of primase HME7025_01945 PF01773 Na+ dependent nucleoside transporter N-terminus HME7025_01945 PF07662 Na+ dependent nucleoside transporter C-terminus HME7025_01945 PF07670 Nucleoside recognition HME7025_01946 PF13089 Polyphosphate kinase N-terminal domain HME7025_01946 PF17941 Polyphosphate kinase C-terminal domain 1 HME7025_01946 PF13090 Polyphosphate kinase C-terminal domain 2 HME7025_01946 PF02503 Polyphosphate kinase middle domain HME7025_01948 PF00204 DNA gyrase B HME7025_01948 PF00986 DNA gyrase B subunit, carboxyl terminus HME7025_01948 PF01751 Toprim domain HME7025_01948 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_01949 PF02142 MGS-like domain HME7025_01949 PF01808 AICARFT/IMPCHase bienzyme HME7025_01950 PF07470 Glycosyl Hydrolase Family 88 HME7025_01954 PF02311 AraC-like ligand binding domain HME7025_01954 PF12833 Helix-turn-helix domain HME7025_01958 PF00034 Cytochrome c HME7025_01964 PF00106 short chain dehydrogenase HME7025_01966 PF00294 pfkB family carbohydrate kinase HME7025_01967 PF00128 Alpha amylase, catalytic domain HME7025_01969 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_01970 PF00326 Prolyl oligopeptidase family HME7025_01970 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region HME7025_01970 PF07676 WD40-like Beta Propeller Repeat HME7025_01971 PF01431 Peptidase family M13 HME7025_01971 PF05649 Peptidase family M13 HME7025_01973 PF07715 TonB-dependent Receptor Plug Domain HME7025_01973 PF00593 TonB dependent receptor HME7025_01975 PF07715 TonB-dependent Receptor Plug Domain HME7025_01975 PF00593 TonB dependent receptor HME7025_01976 PF02447 GntP family permease HME7025_01982 PF01134 Glucose inhibited division protein A HME7025_01983 PF12697 Alpha/beta hydrolase family HME7025_01985 PF01513 ATP-NAD kinase HME7025_01986 PF05190 MutS family domain IV HME7025_01986 PF01624 MutS domain I HME7025_01986 PF00488 MutS domain V HME7025_01986 PF05188 MutS domain II HME7025_01986 PF05192 MutS domain III HME7025_01987 PF05199 GMC oxidoreductase HME7025_01987 PF00732 GMC oxidoreductase HME7025_02001 PF01207 Dihydrouridine synthase (Dus) HME7025_02005 PF00487 Fatty acid desaturase HME7025_02006 PF00696 Amino acid kinase family HME7025_02007 PF01765 Ribosome recycling factor HME7025_02009 PF00348 Polyprenyl synthetase HME7025_02011 PF13302 Acetyltransferase (GNAT) domain HME7025_02013 PF00696 Amino acid kinase family HME7025_02014 PF07687 Peptidase dimerisation domain HME7025_02014 PF01546 Peptidase family M20/M25/M40 HME7025_02015 PF00206 Lyase HME7025_02016 PF00677 Lumazine binding domain HME7025_02021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_02021 PF00512 His Kinase A (phospho-acceptor) domain HME7025_02023 PF01209 ubiE/COQ5 methyltransferase family HME7025_02028 PF02585 GlcNAc-PI de-N-acetylase HME7025_02028 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HME7025_02029 PF13183 4Fe-4S dicluster domain HME7025_02029 PF02913 FAD linked oxidases, C-terminal domain HME7025_02029 PF01565 FAD binding domain HME7025_02031 PF00535 Glycosyl transferase family 2 HME7025_02033 PF03477 ATP cone domain HME7025_02033 PF02867 Ribonucleotide reductase, barrel domain HME7025_02033 PF00317 Ribonucleotide reductase, all-alpha domain HME7025_02034 PF01197 Ribosomal protein L31 HME7025_02035 PF12804 MobA-like NTP transferase domain HME7025_02035 PF14602 Hexapeptide repeat of succinyl-transferase HME7025_02035 PF00132 Bacterial transferase hexapeptide (six repeats) HME7025_02036 PF09115 DNA polymerase III, delta subunit, C terminal HME7025_02037 PF03900 Porphobilinogen deaminase, C-terminal domain HME7025_02037 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HME7025_02038 PF04321 RmlD substrate binding domain HME7025_02039 PF01018 GTP1/OBG HME7025_02039 PF01926 50S ribosome-binding GTPase HME7025_02041 PF00593 TonB dependent receptor HME7025_02041 PF07715 TonB-dependent Receptor Plug Domain HME7025_02043 PF07676 WD40-like Beta Propeller Repeat HME7025_02045 PF00271 Helicase conserved C-terminal domain HME7025_02045 PF17764 3′ DNA-binding domain (3′BD) HME7025_02045 PF18074 Primosomal protein N C-terminal domain HME7025_02045 PF04851 Type III restriction enzyme, res subunit HME7025_02045 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HME7025_02048 PF00224 Pyruvate kinase, barrel domain HME7025_02048 PF02887 Pyruvate kinase, alpha/beta domain HME7025_02048 PF00391 PEP-utilising enzyme, mobile domain HME7025_02053 PF03781 Sulfatase-modifying factor enzyme 1 HME7025_02057 PF02629 CoA binding domain HME7025_02057 PF00549 CoA-ligase HME7025_02058 PF13476 AAA domain HME7025_02060 PF02630 SCO1/SenC HME7025_02064 PF00924 Mechanosensitive ion channel HME7025_02065 PF08502 LeuA allosteric (dimerisation) domain HME7025_02065 PF00682 HMGL-like HME7025_02066 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HME7025_02066 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HME7025_02068 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HME7025_02068 PF00205 Thiamine pyrophosphate enzyme, central domain HME7025_02068 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HME7025_02069 PF00920 Dehydratase family HME7025_02070 PF00005 ABC transporter HME7025_02070 PF00664 ABC transporter transmembrane region HME7025_02071 PF01266 FAD dependent oxidoreductase HME7025_02072 PF03702 Anhydro-N-acetylmuramic acid kinase HME7025_02073 PF00849 RNA pseudouridylate synthase HME7025_02073 PF01479 S4 domain HME7025_02075 PF00589 Phage integrase family HME7025_02075 PF02899 Phage integrase, N-terminal SAM-like domain HME7025_02077 PF01555 DNA methylase HME7025_02080 PF00239 Resolvase, N terminal domain HME7025_02080 PF02796 Helix-turn-helix domain of resolvase HME7025_02083 PF00403 Heavy-metal-associated domain HME7025_02085 PF00529 HlyD membrane-fusion protein of T1SS HME7025_02085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HME7025_02086 PF00873 AcrB/AcrD/AcrF family HME7025_02088 PF07731 Multicopper oxidase HME7025_02088 PF07732 Multicopper oxidase HME7025_02088 PF00394 Multicopper oxidase HME7025_02101 PF05448 Acetyl xylan esterase (AXE1) HME7025_02106 PF04405 Domain of Unknown function (DUF542) HME7025_02106 PF01814 Hemerythrin HHE cation binding domain HME7025_02107 PF02082 Transcriptional regulator HME7025_02113 PF03328 HpcH/HpaI aldolase/citrate lyase family HME7025_02117 PF07715 TonB-dependent Receptor Plug Domain HME7025_02117 PF00593 TonB dependent receptor HME7025_02121 PF00593 TonB dependent receptor HME7025_02121 PF07715 TonB-dependent Receptor Plug Domain HME7025_02126 PF01380 SIS domain HME7025_02128 PF00107 Zinc-binding dehydrogenase HME7025_02128 PF08240 Alcohol dehydrogenase GroES-like domain HME7025_02129 PF00005 ABC transporter HME7025_02133 PF04237 YjbR HME7025_02136 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HME7025_02137 PF16314 Domain of unknown function (DUF4954) HME7025_02139 PF02347 Glycine cleavage system P-protein HME7025_02140 PF00378 Enoyl-CoA hydratase/isomerase HME7025_02140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HME7025_02140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HME7025_02141 PF00108 Thiolase, N-terminal domain HME7025_02141 PF02803 Thiolase, C-terminal domain HME7025_02142 PF00202 Aminotransferase class-III HME7025_02143 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HME7025_02144 PF07497 Rho termination factor, RNA-binding domain HME7025_02144 PF07498 Rho termination factor, N-terminal domain HME7025_02144 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HME7025_02145 PF00155 Aminotransferase class I and II HME7025_02147 PF00202 Aminotransferase class-III HME7025_02149 PF05199 GMC oxidoreductase HME7025_02149 PF00732 GMC oxidoreductase HME7025_02151 PF00268 Ribonucleotide reductase, small chain HME7025_02153 PF17755 UvrA DNA-binding domain HME7025_02153 PF17760 UvrA interaction domain HME7025_02154 PF00361 Proton-conducting membrane transporter HME7025_02155 PF00156 Phosphoribosyl transferase domain HME7025_02160 PF04760 Translation initiation factor IF-2, N-terminal region HME7025_02160 PF00009 Elongation factor Tu GTP binding domain HME7025_02160 PF11987 Translation-initiation factor 2 HME7025_02161 PF00575 S1 RNA binding domain HME7025_02161 PF08529 NusA N-terminal domain HME7025_02161 PF13184 NusA-like KH domain HME7025_02162 PF02576 RimP N-terminal domain HME7025_02165 PF07715 TonB-dependent Receptor Plug Domain HME7025_02165 PF00593 TonB dependent receptor HME7025_02166 PF00958 GMP synthase C terminal domain HME7025_02166 PF13673 Acetyltransferase (GNAT) domain HME7025_02166 PF00117 Glutamine amidotransferase class-I HME7025_02166 PF13302 Acetyltransferase (GNAT) domain HME7025_02166 PF03352 Methyladenine glycosylase HME7025_02167 PF00535 Glycosyl transferase family 2 HME7025_02169 PF01668 SmpB protein HME7025_02173 PF01112 Asparaginase HME7025_02180 PF01593 Flavin containing amine oxidoreductase HME7025_02181 PF08281 Sigma-70, region 4 HME7025_02181 PF04542 Sigma-70 region 2 HME7025_02188 PF03062 MBOAT, membrane-bound O-acyltransferase family HME7025_02189 PF00133 tRNA synthetases class I (I, L, M and V) HME7025_02189 PF08264 Anticodon-binding domain of tRNA HME7025_02190 PF01812 5-formyltetrahydrofolate cyclo-ligase family HME7025_02192 PF02774 Semialdehyde dehydrogenase, dimerisation domain HME7025_02192 PF01118 Semialdehyde dehydrogenase, NAD binding domain HME7025_02193 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HME7025_02195 PF08281 Sigma-70, region 4 HME7025_02195 PF04542 Sigma-70 region 2 HME7025_02197 PF10576 Iron-sulfur binding domain of endonuclease III HME7025_02197 PF00633 Helix-hairpin-helix motif HME7025_02197 PF00730 HhH-GPD superfamily base excision DNA repair protein HME7025_02198 PF04973 Nicotinamide mononucleotide transporter HME7025_02199 PF01258 Prokaryotic dksA/traR C4-type zinc finger HME7025_02202 PF03462 PCRF domain HME7025_02202 PF00472 RF-1 domain HME7025_02203 PF07992 Pyridine nucleotide-disulphide oxidoreductase HME7025_02203 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HME7025_02205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_02205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_02206 PF00873 AcrB/AcrD/AcrF family HME7025_02208 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HME7025_02208 PF00529 HlyD membrane-fusion protein of T1SS HME7025_02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_02210 PF00512 His Kinase A (phospho-acceptor) domain HME7025_02210 PF00672 HAMP domain HME7025_02211 PF00072 Response regulator receiver domain HME7025_02211 PF00486 Transcriptional regulatory protein, C terminal HME7025_02212 PF04299 Putative FMN-binding domain HME7025_02214 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HME7025_02214 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HME7025_02215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HME7025_02215 PF10414 Sirohaem synthase dimerisation region HME7025_02215 PF14824 Sirohaem biosynthesis protein central HME7025_02216 PF01042 Endoribonuclease L-PSP HME7025_02217 PF00294 pfkB family carbohydrate kinase HME7025_02217 PF01467 Cytidylyltransferase-like HME7025_02218 PF04055 Radical SAM superfamily HME7025_02218 PF06463 Molybdenum Cofactor Synthesis C HME7025_02220 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HME7025_02220 PF00361 Proton-conducting membrane transporter HME7025_02220 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus HME7025_02221 PF00361 Proton-conducting membrane transporter HME7025_02229 PF03544 Gram-negative bacterial TonB protein C-terminal HME7025_02232 PF01618 MotA/TolQ/ExbB proton channel family HME7025_02237 PF17676 LD-carboxypeptidase C-terminal domain HME7025_02237 PF02016 LD-carboxypeptidase N-terminal domain HME7025_02238 PF01078 Magnesium chelatase, subunit ChlI HME7025_02238 PF13335 Magnesium chelatase, subunit ChlI C-terminal HME7025_02241 PF00091 Tubulin/FtsZ family, GTPase domain HME7025_02241 PF12327 FtsZ family, C-terminal domain HME7025_02242 PF03932 CutC family HME7025_02244 PF01266 FAD dependent oxidoreductase HME7025_02244 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HME7025_02246 PF00885 6,7-dimethyl-8-ribityllumazine synthase HME7025_02247 PF01842 ACT domain HME7025_02247 PF00696 Amino acid kinase family HME7025_02248 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HME7025_02248 PF02403 Seryl-tRNA synthetase N-terminal domain HME7025_02249 PF00072 Response regulator receiver domain HME7025_02249 PF00486 Transcriptional regulatory protein, C terminal HME7025_02250 PF00512 His Kinase A (phospho-acceptor) domain HME7025_02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HME7025_02252 PF17864 RuvB AAA lid domain HME7025_02252 PF05491 RuvB C-terminal winged helix domain HME7025_02252 PF05496 Holliday junction DNA helicase RuvB P-loop domain HME7025_02253 PF00230 Major intrinsic protein HME7025_02254 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HME7025_02254 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HME7025_02257 PF01225 Mur ligase family, catalytic domain HME7025_02257 PF02875 Mur ligase family, glutamate ligase domain HME7025_02257 PF08245 Mur ligase middle domain HME7025_02259 PF12848 ABC transporter HME7025_02259 PF00005 ABC transporter HME7025_02261 PF17863 AAA lid domain HME7025_02261 PF07726 ATPase family associated with various cellular activities (AAA) HME7025_02262 PF13472 GDSL-like Lipase/Acylhydrolase family HME7025_02268 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HME7025_02268 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HME7025_02270 PF02705 K+ potassium transporter HME7025_02271 PF01738 Dienelactone hydrolase family HME7025_02274 PF01507 Phosphoadenosine phosphosulfate reductase family HME7025_02275 PF01507 Phosphoadenosine phosphosulfate reductase family HME7025_02276 PF00009 Elongation factor Tu GTP binding domain HME7025_02278 PF10458 Valyl tRNA synthetase tRNA binding arm HME7025_02278 PF00133 tRNA synthetases class I (I, L, M and V) HME7025_02278 PF08264 Anticodon-binding domain of tRNA HME7025_02280 PF00664 ABC transporter transmembrane region HME7025_02280 PF00005 ABC transporter HME7025_02281 PF01475 Ferric uptake regulator family HME7025_02291 PF00849 RNA pseudouridylate synthase HME7025_02292 PF02082 Transcriptional regulator HME7025_02293 PF00177 Ribosomal protein S7p/S5e HME7025_02294 PF00164 Ribosomal protein S12/S23 HME7025_02295 PF03786 D-mannonate dehydratase (UxuA) HME7025_02297 PF00270 DEAD/DEAH box helicase HME7025_02297 PF16124 RecQ zinc-binding HME7025_02297 PF00570 HRDC domain HME7025_02297 PF00271 Helicase conserved C-terminal domain HME7025_02297 PF09382 RQC domain HME7025_02298 PF02190 ATP-dependent protease La (LON) substrate-binding domain HME7025_02298 PF05362 Lon protease (S16) C-terminal proteolytic domain HME7025_02298 PF00004 ATPase family associated with various cellular activities (AAA) HME7025_02300 PF02163 Peptidase family M50 HME7025_02300 PF17820 PDZ domain HME7025_02301 PF13288 DXP reductoisomerase C-terminal domain HME7025_02301 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HME7025_02301 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HME7025_02303 PF00348 Polyprenyl synthetase HME7025_02304 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HME7025_02305 PF00471 Ribosomal protein L33 HME7025_02307 PF00448 SRP54-type protein, GTPase domain HME7025_02307 PF02881 SRP54-type protein, helical bundle domain HME7025_02308 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HME7025_02308 PF00749 tRNA synthetases class I (E and Q), catalytic domain HME7025_02311 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HME7025_02311 PF01926 50S ribosome-binding GTPase HME7025_02312 PF07650 KH domain HME7025_02312 PF01926 50S ribosome-binding GTPase HME7025_02315 PF00691 OmpA family HME7025_02315 PF13677 Membrane MotB of proton-channel complex MotA/MotB HME7025_02316 PF02770 Acyl-CoA dehydrogenase, middle domain HME7025_02316 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HME7025_02316 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HME7025_02319 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HME7025_02320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HME7025_02320 PF02874 ATP synthase alpha/beta family, beta-barrel domain HME7025_02322 PF00338 Ribosomal protein S10p/S20e HME7025_02323 PF00535 Glycosyl transferase family 2 HME7025_02324 PF00468 Ribosomal protein L34 HME7025_02325 PF00825 Ribonuclease P HME7025_02326 PF03572 Peptidase family S41 HME7025_02326 PF13180 PDZ domain HME7025_02327 PF00814 Glycoprotease family HME7025_02332 PF02401 LytB protein HME7025_02335 PF03372 Endonuclease/Exonuclease/phosphatase family HME7025_02339 PF14579 Helix-hairpin-helix motif HME7025_02339 PF11490 DNA polymerase III polC-type N-terminus II HME7025_02339 PF07733 Bacterial DNA polymerase III alpha NTPase domain HME7025_02339 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HME7025_02339 PF14480 DNA polymerase III polC-type N-terminus I HME7025_02339 PF00929 Exonuclease HME7025_02339 PF02811 PHP domain HME7025_02340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HME7025_02341 PF00361 Proton-conducting membrane transporter HME7025_02341 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HME7025_02342 PF00361 Proton-conducting membrane transporter HME7025_02343 PF00361 Proton-conducting membrane transporter HME7025_02352 PF09190 DALR domain HME7025_02352 PF01406 tRNA synthetases class I (C) catalytic domain HME7025_02355 PF02780 Transketolase, C-terminal domain HME7025_02355 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HME7025_02355 PF02779 Transketolase, pyrimidine binding domain HME7025_02357 PF03772 Competence protein HME7025_02357 PF00753 Metallo-beta-lactamase superfamily HME7025_02357 PF13567 Domain of unknown function (DUF4131) HME7025_02358 PF01467 Cytidylyltransferase-like HME7025_02359 PF00625 Guanylate kinase HME7025_02361 PF08281 Sigma-70, region 4 HME7025_02361 PF04542 Sigma-70 region 2 HME7025_02366 PF01479 S4 domain HME7025_02366 PF00849 RNA pseudouridylate synthase HME7025_02367 PF01389 OmpA-like transmembrane domain HME7025_02367 PF00691 OmpA family HME7025_02368 PF01979 Amidohydrolase family HME7025_02370 PF01351 Ribonuclease HII HME7025_02371 PF00082 Subtilase family HME7025_02372 PF00107 Zinc-binding dehydrogenase HME7025_02372 PF08240 Alcohol dehydrogenase GroES-like domain HME7025_02374 PF01370 NAD dependent epimerase/dehydratase family HME7025_02377 PF01740 STAS domain HME7025_02377 PF00916 Sulfate permease family HME7025_02378 PF00484 Carbonic anhydrase HME7025_02379 PF02938 GAD domain HME7025_02379 PF00152 tRNA synthetases class II (D, K and N) HME7025_02379 PF01336 OB-fold nucleic acid binding domain HME7025_02380 PF01593 Flavin containing amine oxidoreductase HME7025_02382 PF00571 CBS domain HME7025_02382 PF01380 SIS domain HME7025_02383 PF16124 RecQ zinc-binding HME7025_02383 PF00570 HRDC domain HME7025_02383 PF00271 Helicase conserved C-terminal domain HME7025_02383 PF09382 RQC domain HME7025_02383 PF00270 DEAD/DEAH box helicase HME7025_02384 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HME7025_02384 PF02843 Phosphoribosylglycinamide synthetase, C domain HME7025_02384 PF02844 Phosphoribosylglycinamide synthetase, N domain HME7025_02385 PF04468 PSP1 C-terminal conserved region HME7025_02387 PF01037 Lrp/AsnC ligand binding domain HME7025_02388 PF00529 HlyD membrane-fusion protein of T1SS HME7025_02388 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HME7025_02390 PF00873 AcrB/AcrD/AcrF family HME7025_02391 PF01872 RibD C-terminal domain HME7025_02391 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HME7025_02392 PF01566 Natural resistance-associated macrophage protein HME7025_02394 PF00271 Helicase conserved C-terminal domain HME7025_02394 PF00176 SNF2 family N-terminal domain HME7025_02394 PF04434 SWIM zinc finger HME7025_02397 PF01520 N-acetylmuramoyl-L-alanine amidase HME7025_02397 PF11741 AMIN domain HME7025_02399 PF01625 Peptide methionine sulfoxide reductase HME7025_02401 PF02719 Polysaccharide biosynthesis protein HME7025_02403 PF02769 AIR synthase related protein, C-terminal domain HME7025_02403 PF00586 AIR synthase related protein, N-terminal domain HME7025_02408 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HME7025_02408 PF00117 Glutamine amidotransferase class-I HME7025_02409 PF01196 Ribosomal protein L17 HME7025_02410 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HME7025_02410 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HME7025_02410 PF01000 RNA polymerase Rpb3/RpoA insert domain HME7025_02411 PF00163 Ribosomal protein S4/S9 N-terminal domain HME7025_02411 PF01479 S4 domain HME7025_02412 PF00411 Ribosomal protein S11 HME7025_02413 PF00416 Ribosomal protein S13/S18 HME7025_02414 PF00444 Ribosomal protein L36 HME7025_02415 PF01176 Translation initiation factor 1A / IF-1 HME7025_02416 PF00557 Metallopeptidase family M24 HME7025_02417 PF00344 SecY translocase HME7025_02418 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HME7025_02419 PF00327 Ribosomal protein L30p/L7e HME7025_02420 PF00333 Ribosomal protein S5, N-terminal domain HME7025_02420 PF03719 Ribosomal protein S5, C-terminal domain HME7025_02421 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HME7025_02422 PF00347 Ribosomal protein L6 HME7025_02423 PF00410 Ribosomal protein S8 HME7025_02424 PF00253 Ribosomal protein S14p/S29e HME7025_02425 PF00673 ribosomal L5P family C-terminus HME7025_02425 PF00281 Ribosomal protein L5 HME7025_02426 PF00467 KOW motif HME7025_02426 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HME7025_02427 PF00238 Ribosomal protein L14p/L23e HME7025_02428 PF00366 Ribosomal protein S17 HME7025_02429 PF00831 Ribosomal L29 protein HME7025_02430 PF00252 Ribosomal protein L16p/L10e HME7025_02431 PF07650 KH domain HME7025_02431 PF00189 Ribosomal protein S3, C-terminal domain HME7025_02432 PF00237 Ribosomal protein L22p/L17e HME7025_02433 PF00203 Ribosomal protein S19 HME7025_02434 PF00181 Ribosomal Proteins L2, RNA binding domain HME7025_02434 PF03947 Ribosomal Proteins L2, C-terminal domain HME7025_02435 PF00276 Ribosomal protein L23 HME7025_02436 PF00573 Ribosomal protein L4/L1 family HME7025_02437 PF00297 Ribosomal protein L3 HME7025_02438 PF01116 Fructose-bisphosphate aldolase class-II HME7025_02440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HME7025_02440 PF10414 Sirohaem synthase dimerisation region HME7025_02440 PF14824 Sirohaem biosynthesis protein central HME7025_02441 PF04055 Radical SAM superfamily HME7025_02442 PF09424 Yqey-like protein HME7025_02444 PF03009 Glycerophosphoryl diester phosphodiesterase family HME7025_02448 PF13519 von Willebrand factor type A domain HME7025_02449 PF08544 GHMP kinases C terminal HME7025_02449 PF00288 GHMP kinases N terminal domain HME7025_02451 PF00873 AcrB/AcrD/AcrF family HME7025_02453 PF09335 SNARE associated Golgi protein HME7025_02454 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HME7025_02456 PF10079 Bacillithiol biosynthesis BshC HME7025_02458 PF00132 Bacterial transferase hexapeptide (six repeats) HME7025_02459 PF00291 Pyridoxal-phosphate dependent enzyme HME7025_02462 PF01979 Amidohydrolase family HME7025_02463 PF01979 Amidohydrolase family HME7025_02468 PF00593 TonB dependent receptor HME7025_02468 PF07715 TonB-dependent Receptor Plug Domain HME7025_02472 PF00005 ABC transporter HME7025_02472 PF12399 Branched-chain amino acid ATP-binding cassette transporter HME7025_02473 PF01053 Cys/Met metabolism PLP-dependent enzyme HME7025_02476 PF03062 MBOAT, membrane-bound O-acyltransferase family HME7025_02477 PF00067 Cytochrome P450 HME7025_02480 PF01370 NAD dependent epimerase/dehydratase family HME7025_02483 PF02350 UDP-N-acetylglucosamine 2-epimerase HME7025_02484 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_02484 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_02485 PF13537 Glutamine amidotransferase domain HME7025_02485 PF00733 Asparagine synthase HME7025_02486 PF00534 Glycosyl transferases group 1 HME7025_02486 PF13439 Glycosyltransferase Family 4 HME7025_02487 PF00733 Asparagine synthase HME7025_02487 PF13537 Glutamine amidotransferase domain HME7025_02489 PF08003 Protein of unknown function (DUF1698) HME7025_02490 PF00534 Glycosyl transferases group 1 HME7025_02493 PF14602 Hexapeptide repeat of succinyl-transferase HME7025_02493 PF12464 Maltose acetyltransferase HME7025_02496 PF00977 Histidine biosynthesis protein HME7025_02497 PF00117 Glutamine amidotransferase class-I HME7025_02498 PF03102 NeuB family HME7025_02498 PF08666 SAF domain HME7025_02499 PF03102 NeuB family HME7025_02499 PF08666 SAF domain HME7025_02500 PF00551 Formyl transferase HME7025_02500 PF02911 Formyl transferase, C-terminal domain HME7025_02500 PF01370 NAD dependent epimerase/dehydratase family HME7025_02502 PF00977 Histidine biosynthesis protein HME7025_02503 PF00117 Glutamine amidotransferase class-I HME7025_02505 PF00202 Aminotransferase class-III HME7025_02506 PF02348 Cytidylyltransferase HME7025_02509 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HME7025_02510 PF02719 Polysaccharide biosynthesis protein HME7025_02511 PF01370 NAD dependent epimerase/dehydratase family HME7025_02512 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HME7025_02512 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HME7025_02512 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HME7025_02514 PF02397 Bacterial sugar transferase HME7025_02515 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HME7025_02515 PF01368 DHH family HME7025_02515 PF17768 RecJ OB domain HME7025_02515 PF02272 DHHA1 domain HME7025_02525 PF07715 TonB-dependent Receptor Plug Domain HME7025_02525 PF00593 TonB dependent receptor HME7025_02530 PF17954 Quercetinase C-terminal cupin domain HME7025_02530 PF02678 Pirin HME7025_02531 PF04264 YceI-like domain HME7025_02534 PF01734 Patatin-like phospholipase HME7025_02537 PF03641 Possible lysine decarboxylase HME7025_02540 PF00732 GMC oxidoreductase HME7025_02540 PF05199 GMC oxidoreductase HME7025_02543 PF16347 Domain of unknown function (DUF4976) HME7025_02543 PF00884 Sulfatase HME7025_02545 PF02837 Glycosyl hydrolases family 2, sugar binding domain HME7025_02545 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HME7025_02545 PF00703 Glycosyl hydrolases family 2 HME7025_02548 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HME7025_02552 PF05726 Pirin C-terminal cupin domain HME7025_02552 PF02678 Pirin HME7025_02554 PF00593 TonB dependent receptor HME7025_02554 PF07715 TonB-dependent Receptor Plug Domain HME7025_02560 PF13847 Methyltransferase domain HME7025_02566 PF00690 Cation transporter/ATPase, N-terminus HME7025_02566 PF00689 Cation transporting ATPase, C-terminus HME7025_02570 PF07690 Major Facilitator Superfamily HME7025_02572 PF03786 D-mannonate dehydratase (UxuA) HME7025_02573 PF00356 Bacterial regulatory proteins, lacI family HME7025_02576 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HME7025_02576 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HME7025_02577 PF02417 Chromate transporter HME7025_02579 PF03601 Conserved hypothetical protein 698 HME7025_02580 PF04616 Glycosyl hydrolases family 43 HME7025_02590 PF01011 PQQ enzyme repeat HME7025_02592 PF00145 C-5 cytosine-specific DNA methylase HME7025_02593 PF02976 DNA mismatch repair enzyme MutH HME7025_02598 PF02615 Malate/L-lactate dehydrogenase HME7025_02600 PF00155 Aminotransferase class I and II HME7025_02602 PF03544 Gram-negative bacterial TonB protein C-terminal HME7025_02604 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_02604 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HME7025_02606 PF02566 OsmC-like protein HME7025_02612 PF00135 Carboxylesterase family HME7025_02613 PF02567 Phenazine biosynthesis-like protein HME7025_02617 PF06736 Protein of unknown function (DUF1211) HME7025_02618 PF00892 EamA-like transporter family HME7025_02619 PF07690 Major Facilitator Superfamily HME7025_02621 PF00664 ABC transporter transmembrane region HME7025_02621 PF00005 ABC transporter HME7025_02624 PF13443 Cro/C1-type HTH DNA-binding domain HME7025_02638 PF12706 Beta-lactamase superfamily domain HME7025_02641 PF00331 Glycosyl hydrolase family 10 HME7025_02641 PF00756 Putative esterase HME7025_02642 PF00933 Glycosyl hydrolase family 3 N terminal domain HME7025_02647 PF13472 GDSL-like Lipase/Acylhydrolase family HME7025_02647 PF07859 alpha/beta hydrolase fold HME7025_02648 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HME7025_02649 PF00111 2Fe-2S iron-sulfur cluster binding domain HME7025_02649 PF01799 [2Fe-2S] binding domain HME7025_02650 PF00248 Aldo/keto reductase family HME7025_02653 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HME7025_02655 PF01638 HxlR-like helix-turn-helix HME7025_02656 PF00135 Carboxylesterase family HME7025_02662 PF00501 AMP-binding enzyme HME7025_02662 PF13193 AMP-binding enzyme C-terminal domain HME7025_02666 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HME7025_02666 PF03466 LysR substrate binding domain HME7025_02668 PF10518 TAT (twin-arginine translocation) pathway signal sequence HME7025_02668 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HME7025_02669 PF07676 WD40-like Beta Propeller Repeat