locus-tag class description H6850_00015 PF17209 Hfq protein H6850_00025 PF02622 Uncharacterized ACR, COG1678 H6850_00030 PF02272 DHHA1 domain H6850_00030 PF01411 tRNA synthetases class II (A) H6850_00030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H6850_00035 PF01743 Poly A polymerase head domain H6850_00035 PF12627 Probable RNA and SrmB- binding site of polymerase A H6850_00035 PF13735 tRNA nucleotidyltransferase domain 2 putative H6850_00040 PF01103 Surface antigen H6850_00040 PF07244 Surface antigen variable number repeat H6850_00045 PF02163 Peptidase family M50 H6850_00045 PF17820 PDZ domain H6850_00050 PF02096 60Kd inner membrane protein H6850_00050 PF14849 YidC periplasmic domain H6850_00055 PF01790 Prolipoprotein diacylglyceryl transferase H6850_00065 PF00005 ABC transporter H6850_00065 PF08402 TOBE domain H6850_00070 PF00005 ABC transporter H6850_00070 PF16326 ABC transporter C-terminal domain H6850_00070 PF12848 ABC transporter H6850_00075 PF01196 Ribosomal protein L17 H6850_00080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H6850_00080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H6850_00080 PF01000 RNA polymerase Rpb3/RpoA insert domain H6850_00085 PF00411 Ribosomal protein S11 H6850_00090 PF00416 Ribosomal protein S13/S18 H6850_00095 PF05191 Adenylate kinase, active site lid H6850_00100 PF00344 SecY translocase H6850_00105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H6850_00115 PF00333 Ribosomal protein S5, N-terminal domain H6850_00115 PF03719 Ribosomal protein S5, C-terminal domain H6850_00120 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H6850_00125 PF00347 Ribosomal protein L6 H6850_00130 PF00410 Ribosomal protein S8 H6850_00135 PF00253 Ribosomal protein S14p/S29e H6850_00140 PF00281 Ribosomal protein L5 H6850_00140 PF00673 ribosomal L5P family C-terminus H6850_00145 PF00467 KOW motif H6850_00145 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H6850_00150 PF00238 Ribosomal protein L14p/L23e H6850_00155 PF00366 Ribosomal protein S17 H6850_00165 PF00252 Ribosomal protein L16p/L10e H6850_00170 PF07650 KH domain H6850_00170 PF00189 Ribosomal protein S3, C-terminal domain H6850_00175 PF00237 Ribosomal protein L22p/L17e H6850_00180 PF00203 Ribosomal protein S19 H6850_00185 PF03947 Ribosomal Proteins L2, C-terminal domain H6850_00185 PF00181 Ribosomal Proteins L2, RNA binding domain H6850_00190 PF00276 Ribosomal protein L23 H6850_00195 PF00573 Ribosomal protein L4/L1 family H6850_00200 PF00297 Ribosomal protein L3 H6850_00205 PF00338 Ribosomal protein S10p/S20e H6850_00225 PF14437 MafB19-like deaminase H6850_00230 PF00550 Phosphopantetheine attachment site H6850_00235 PF03989 DNA gyrase C-terminal domain, beta-propeller H6850_00235 PF00521 DNA gyrase/topoisomerase IV, subunit A H6850_00245 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H6850_00245 PF00056 lactate/malate dehydrogenase, NAD binding domain H6850_00250 PF02390 Putative methyltransferase H6850_00255 PF01596 O-methyltransferase H6850_00265 PF03772 Competence protein H6850_00265 PF13567 Domain of unknown function (DUF4131) H6850_00265 PF00753 Metallo-beta-lactamase superfamily H6850_00280 PF03799 Cell division protein FtsQ H6850_00280 PF08478 POTRA domain, FtsQ-type H6850_00285 PF00849 RNA pseudouridylate synthase H6850_00285 PF01479 S4 domain H6850_00300 PF00912 Transglycosylase H6850_00300 PF00905 Penicillin binding protein transpeptidase domain H6850_00310 PF06071 Protein of unknown function (DUF933) H6850_00310 PF01926 50S ribosome-binding GTPase H6850_00315 PF02590 Predicted SPOUT methyltransferase H6850_00325 PF01066 CDP-alcohol phosphatidyltransferase H6850_00330 PF02666 Phosphatidylserine decarboxylase H6850_00335 PF00005 ABC transporter H6850_00340 PF00575 S1 RNA binding domain H6850_00345 PF00795 Carbon-nitrogen hydrolase H6850_00350 PF00579 tRNA synthetases class I (W and Y) H6850_00355 PF01165 Ribosomal protein S21 H6850_00365 PF12169 DNA polymerase III subunits gamma and tau domain III H6850_00365 PF12170 DNA polymerase III tau subunit V interacting with alpha H6850_00380 PF06744 Type VI secretion protein IcmF C-terminal H6850_00380 PF06761 Intracellular multiplication and human macrophage-killing H6850_00380 PF14331 ImcF-related N-terminal domain H6850_00395 PF06418 CTP synthase N-terminus H6850_00395 PF00117 Glutamine amidotransferase class-I H6850_00410 PF02768 DNA polymerase III beta subunit, C-terminal domain H6850_00410 PF00712 DNA polymerase III beta subunit, N-terminal domain H6850_00410 PF02767 DNA polymerase III beta subunit, central domain H6850_00415 PF02472 Biopolymer transport protein ExbD/TolR H6850_00430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H6850_00430 PF00005 ABC transporter H6850_00445 PF01926 50S ribosome-binding GTPase H6850_00455 PF00012 Hsp70 protein H6850_00465 PF03129 Anticodon binding domain H6850_00465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H6850_00470 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) H6850_00490 PF05173 Dihydrodipicolinate reductase, C-terminus H6850_00490 PF01113 Dihydrodipicolinate reductase, N-terminus H6850_00500 PF02578 Multi-copper polyphenol oxidoreductase laccase H6850_00510 PF00226 DnaJ domain H6850_00510 PF07743 HSCB C-terminal oligomerisation domain H6850_00520 PF02601 Exonuclease VII, large subunit H6850_00520 PF13742 OB-fold nucleic acid binding domain H6850_00530 PF04545 Sigma-70, region 4 H6850_00530 PF04542 Sigma-70 region 2 H6850_00530 PF00140 Sigma-70 factor, region 1.2 H6850_00555 PF02609 Exonuclease VII small subunit H6850_00570 PF02559 CarD-like/TRCF domain H6850_00590 PF00448 SRP54-type protein, GTPase domain H6850_00590 PF02881 SRP54-type protein, helical bundle domain H6850_00590 PF02978 Signal peptide binding domain H6850_00595 PF00886 Ribosomal protein S16 H6850_00600 PF04384 Iron-sulphur cluster assembly H6850_00615 PF04545 Sigma-70, region 4 H6850_00615 PF04539 Sigma-70 region 3 H6850_00615 PF04542 Sigma-70 region 2 H6850_00615 PF00140 Sigma-70 factor, region 1.2 H6850_00615 PF03979 Sigma-70 factor, region 1.1 H6850_00615 PF04546 Sigma-70, non-essential region H6850_00620 PF01066 CDP-alcohol phosphatidyltransferase H6850_00640 PF00474 Sodium:solute symporter family H6850_00660 PF01588 Putative tRNA binding domain H6850_00670 PF07690 Major Facilitator Superfamily H6850_00675 PF00679 Elongation factor G C-terminus H6850_00675 PF00009 Elongation factor Tu GTP binding domain H6850_00675 PF03144 Elongation factor Tu domain 2 H6850_00695 PF05970 PIF1-like helicase H6850_00705 PF00300 Histidine phosphatase superfamily (branch 1) H6850_00715 PF13673 Acetyltransferase (GNAT) domain H6850_00715 PF04229 GrpB protein H6850_00730 PF04991 LicD family H6850_00735 PF00483 Nucleotidyl transferase H6850_00740 PF00468 Ribosomal protein L34 H6850_00745 PF00825 Ribonuclease P H6850_00760 PF01740 STAS domain H6850_00760 PF00916 Sulfate permease family H6850_00770 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H6850_00775 PF01694 Rhomboid family H6850_00785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H6850_00785 PF02403 Seryl-tRNA synthetase N-terminal domain H6850_00790 PF02618 YceG-like family H6850_00795 PF00625 Guanylate kinase H6850_00805 PF02502 Ribose/Galactose Isomerase H6850_00810 PF09335 SNARE associated Golgi protein H6850_00820 PF01255 Putative undecaprenyl diphosphate synthase H6850_00825 PF05525 Branched-chain amino acid transport protein H6850_00845 PF00528 Binding-protein-dependent transport system inner membrane component H6850_00850 PF00005 ABC transporter H6850_00865 PF00005 ABC transporter H6850_00870 PF02653 Branched-chain amino acid transport system / permease component H6850_00875 PF04392 ABC transporter substrate binding protein H6850_00880 PF01195 Peptidyl-tRNA hydrolase H6850_00885 PF01386 Ribosomal L25p family H6850_00885 PF14693 Ribosomal protein TL5, C-terminal domain H6850_00905 PF13603 Leucyl-tRNA synthetase, Domain 2 H6850_00905 PF08264 Anticodon-binding domain of tRNA H6850_00905 PF00133 tRNA synthetases class I (I, L, M and V) H6850_00915 PF03222 Tryptophan/tyrosine permease family H6850_00920 PF00162 Phosphoglycerate kinase H6850_00925 PF01078 Magnesium chelatase, subunit ChlI H6850_00925 PF13335 Magnesium chelatase, subunit ChlI C-terminal H6850_00935 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H6850_00940 PF02481 DNA recombination-mediator protein A H6850_00940 PF18255 DNA processing protein A sterile alpha motif domain H6850_00945 PF00111 2Fe-2S iron-sulfur cluster binding domain H6850_00970 PF00004 ATPase family associated with various cellular activities (AAA) H6850_00970 PF07724 AAA domain (Cdc48 subfamily) H6850_00970 PF17871 AAA lid domain H6850_00970 PF02861 Clp amino terminal domain, pathogenicity island component H6850_00970 PF10431 C-terminal, D2-small domain, of ClpB protein H6850_00985 PF00696 Amino acid kinase family H6850_00985 PF01842 ACT domain H6850_00985 PF13840 ACT domain H6850_00995 PF13443 Cro/C1-type HTH DNA-binding domain H6850_01005 PF02091 Glycyl-tRNA synthetase alpha subunit H6850_01015 PF00939 Sodium:sulfate symporter transmembrane region H6850_01060 PF02789 Cytosol aminopeptidase family, N-terminal domain H6850_01060 PF00883 Cytosol aminopeptidase family, catalytic domain H6850_01085 PF01938 TRAM domain H6850_01085 PF04055 Radical SAM superfamily H6850_01085 PF00919 Uncharacterized protein family UPF0004 H6850_01125 PF00072 Response regulator receiver domain H6850_01125 PF00486 Transcriptional regulatory protein, C terminal H6850_01130 PF00005 ABC transporter H6850_01135 PF00950 ABC 3 transport family H6850_01150 PF03441 FAD binding domain of DNA photolyase H6850_01150 PF00875 DNA photolyase H6850_01195 PF01171 PP-loop family H6850_01205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H6850_01205 PF01409 tRNA synthetases class II core domain (F) H6850_01225 PF13360 PQQ-like domain H6850_01230 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H6850_01230 PF01926 50S ribosome-binding GTPase H6850_01240 PF00380 Ribosomal protein S9/S16 H6850_01245 PF00572 Ribosomal protein L13 H6850_01255 PF01649 Ribosomal protein S20 H6850_01260 PF07992 Pyridine nucleotide-disulphide oxidoreductase H6850_01270 PF03129 Anticodon binding domain H6850_01270 PF13393 Histidyl-tRNA synthetase H6850_01290 PF00069 Protein kinase domain H6850_01295 PF01521 Iron-sulphur cluster biosynthesis H6850_01300 PF00069 Protein kinase domain H6850_01300 PF00805 Pentapeptide repeats (8 copies) H6850_01330 PF00834 Ribulose-phosphate 3 epimerase family H6850_01335 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) H6850_01340 PF05697 Bacterial trigger factor protein (TF) H6850_01340 PF05698 Bacterial trigger factor protein (TF) C-terminus H6850_01340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H6850_01365 PF00772 DnaB-like helicase N terminal domain H6850_01365 PF03796 DnaB-like helicase C terminal domain H6850_01370 PF07943 Penicillin-binding protein 5, C-terminal domain H6850_01370 PF00768 D-alanyl-D-alanine carboxypeptidase H6850_01375 PF02075 Crossover junction endodeoxyribonuclease RuvC H6850_01385 PF03471 Transporter associated domain H6850_01385 PF00571 CBS domain H6850_01385 PF01595 Cyclin M transmembrane N-terminal domain H6850_01400 PF00121 Triosephosphate isomerase H6850_01425 PF05496 Holliday junction DNA helicase RuvB P-loop domain H6850_01425 PF17864 RuvB AAA lid domain H6850_01425 PF05491 RuvB C-terminal winged helix domain H6850_01430 PF01098 Cell cycle protein H6850_01455 PF01258 Prokaryotic dksA/traR C4-type zinc finger H6850_01460 PF12802 MarR family H6850_01520 PF00579 tRNA synthetases class I (W and Y) H6850_01545 PF01368 DHH family H6850_01545 PF17768 RecJ OB domain H6850_01545 PF02272 DHHA1 domain H6850_01550 PF00271 Helicase conserved C-terminal domain H6850_01550 PF00270 DEAD/DEAH box helicase H6850_01550 PF17191 RecG wedge domain H6850_01565 PF00580 UvrD/REP helicase N-terminal domain H6850_01565 PF13361 UvrD-like helicase C-terminal domain H6850_01570 PF01197 Ribosomal protein L31 H6850_01580 PF05016 ParE toxin of type II toxin-antitoxin system, parDE H6850_01585 PF04055 Radical SAM superfamily H6850_01585 PF00919 Uncharacterized protein family UPF0004 H6850_01605 PF00043 Glutathione S-transferase, C-terminal domain H6850_01605 PF13417 Glutathione S-transferase, N-terminal domain H6850_01625 PF03793 PASTA domain H6850_01625 PF00069 Protein kinase domain H6850_01630 PF03471 Transporter associated domain H6850_01630 PF00571 CBS domain H6850_01635 PF02130 Uncharacterized protein family UPF0054 H6850_01675 PF04860 Phage portal protein H6850_01680 PF13173 AAA domain H6850_01680 PF13635 Domain of unknown function (DUF4143) H6850_01700 PF00464 Serine hydroxymethyltransferase H6850_01705 PF01541 GIY-YIG catalytic domain H6850_01710 PF01106 NifU-like domain H6850_01765 PF00005 ABC transporter H6850_01780 PF00375 Sodium:dicarboxylate symporter family H6850_01830 PF17770 Ribonuclease J C-terminal domain H6850_01830 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain H6850_01830 PF12706 Beta-lactamase superfamily domain H6850_01860 PF01923 Cobalamin adenosyltransferase H6850_01865 PF00665 Integrase core domain H6850_01870 PF00664 ABC transporter transmembrane region H6850_01870 PF00005 ABC transporter H6850_01885 PF00308 Bacterial dnaA protein H6850_01885 PF11638 DnaA N-terminal domain H6850_01885 PF08299 Bacterial dnaA protein helix-turn-helix H6850_01895 PF01027 Inhibitor of apoptosis-promoting Bax1 H6850_01900 PF13173 AAA domain H6850_01900 PF13635 Domain of unknown function (DUF4143) H6850_01910 PF07690 Major Facilitator Superfamily H6850_01925 PF01648 4'-phosphopantetheinyl transferase superfamily H6850_01935 PF01192 RNA polymerase Rpb6 H6850_01945 PF00557 Metallopeptidase family M24 H6850_01955 PF00482 Type II secretion system (T2SS), protein F H6850_01975 PF00266 Aminotransferase class-V H6850_01980 PF01618 MotA/TolQ/ExbB proton channel family H6850_02010 PF00589 Phage integrase family H6850_02010 PF02899 Phage integrase, N-terminal SAM-like domain H6850_02015 PF00390 Malic enzyme, N-terminal domain H6850_02015 PF03949 Malic enzyme, NAD binding domain H6850_02050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H6850_02050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H6850_02055 PF01702 Queuine tRNA-ribosyltransferase H6850_02070 PF02405 Permease MlaE H6850_02075 PF13635 Domain of unknown function (DUF4143) H6850_02075 PF13173 AAA domain H6850_02080 PF02779 Transketolase, pyrimidine binding domain H6850_02080 PF02780 Transketolase, C-terminal domain H6850_02080 PF00456 Transketolase, thiamine diphosphate binding domain H6850_02095 PF01632 Ribosomal protein L35 H6850_02100 PF00453 Ribosomal protein L20 H6850_02125 PF06421 GTP-binding protein LepA C-terminus H6850_02125 PF03144 Elongation factor Tu domain 2 H6850_02125 PF00009 Elongation factor Tu GTP binding domain H6850_02125 PF00679 Elongation factor G C-terminus H6850_02135 PF02646 RmuC family H6850_02140 PF00873 AcrB/AcrD/AcrF family H6850_02145 PF13533 Biotin-lipoyl like H6850_02150 PF00730 HhH-GPD superfamily base excision DNA repair protein H6850_02150 PF14815 NUDIX domain H6850_02175 PF06969 HemN C-terminal domain H6850_02175 PF04055 Radical SAM superfamily H6850_02180 PF02132 RecR protein H6850_02180 PF13662 Toprim domain H6850_02185 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H6850_02185 PF01565 FAD binding domain H6850_02190 PF13614 AAA domain H6850_02210 PF02575 YbaB/EbfC DNA-binding family H6850_02230 PF00588 SpoU rRNA Methylase family H6850_02255 PF00474 Sodium:solute symporter family H6850_02275 PF10996 Beta-Casp domain H6850_02275 PF00753 Metallo-beta-lactamase superfamily H6850_02275 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain H6850_02295 PF00436 Single-strand binding protein family H6850_02300 PF02355 Protein export membrane protein H6850_02305 PF07549 SecD/SecF GG Motif H6850_02305 PF02355 Protein export membrane protein H6850_02315 PF17773 UPF0176 acylphosphatase like domain H6850_02315 PF00581 Rhodanese-like domain H6850_02330 PF01043 SecA preprotein cross-linking domain H6850_02330 PF07517 SecA DEAD-like domain H6850_02330 PF02810 SEC-C motif H6850_02330 PF07516 SecA Wing and Scaffold domain H6850_02335 PF01678 Diaminopimelate epimerase H6850_02345 PF03472 Autoinducer binding domain H6850_02345 PF00196 Bacterial regulatory proteins, luxR family H6850_02350 PF10410 DnaB-helicase binding domain of primase H6850_02350 PF08278 DNA primase DnaG DnaB-binding H6850_02350 PF08275 DNA primase catalytic core, N-terminal domain H6850_02350 PF01807 CHC2 zinc finger H6850_02375 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal H6850_02375 PF14602 Hexapeptide repeat of succinyl-transferase H6850_02375 PF00132 Bacterial transferase hexapeptide (six repeats) H6850_02380 PF07499 RuvA, C-terminal domain H6850_02380 PF01330 RuvA N terminal domain H6850_02395 PF00633 Helix-hairpin-helix motif H6850_02395 PF10576 Iron-sulfur binding domain of endonuclease III H6850_02395 PF00730 HhH-GPD superfamily base excision DNA repair protein H6850_02400 PF01921 tRNA synthetases class I (K) H6850_02425 PF00009 Elongation factor Tu GTP binding domain H6850_02425 PF03143 Elongation factor Tu C-terminal domain H6850_02425 PF03144 Elongation factor Tu domain 2 H6850_02435 PF03472 Autoinducer binding domain H6850_02435 PF00196 Bacterial regulatory proteins, luxR family H6850_02440 PF02875 Mur ligase family, glutamate ligase domain H6850_02440 PF08245 Mur ligase middle domain H6850_02445 PF01066 CDP-alcohol phosphatidyltransferase H6850_02450 PF00334 Nucleoside diphosphate kinase H6850_02460 PF01761 3-dehydroquinate synthase H6850_02460 PF02541 Ppx/GppA phosphatase family H6850_02485 PF00005 ABC transporter H6850_02485 PF17755 UvrA DNA-binding domain H6850_02485 PF17760 UvrA interaction domain H6850_02505 PF07690 Major Facilitator Superfamily H6850_02510 PF00119 ATP synthase A chain H6850_02515 PF00137 ATP synthase subunit C H6850_02520 PF00430 ATP synthase B/B' CF(0) H6850_02555 PF00692 dUTPase H6850_02560 PF00266 Aminotransferase class-V H6850_02565 PF00266 Aminotransferase class-V H6850_02585 PF00578 AhpC/TSA family H6850_02590 PF01225 Mur ligase family, catalytic domain H6850_02590 PF02875 Mur ligase family, glutamate ligase domain H6850_02590 PF08245 Mur ligase middle domain H6850_02620 PF00580 UvrD/REP helicase N-terminal domain H6850_02620 PF13361 UvrD-like helicase C-terminal domain H6850_02635 PF04977 Septum formation initiator H6850_02645 PF00005 ABC transporter H6850_02665 PF00085 Thioredoxin H6850_02685 PF02556 Preprotein translocase subunit SecB H6850_02690 PF08264 Anticodon-binding domain of tRNA H6850_02690 PF09334 tRNA synthetases class I (M) H6850_02705 PF02092 Glycyl-tRNA synthetase beta subunit H6850_02705 PF05746 DALR anticodon binding domain H6850_02710 PF07690 Major Facilitator Superfamily H6850_02725 PF00892 EamA-like transporter family H6850_02740 PF03330 Lytic transglycolase H6850_02740 PF05036 Sporulation related domain H6850_02745 PF00814 Glycoprotease family H6850_02750 PF01202 Shikimate kinase H6850_02780 PF10458 Valyl tRNA synthetase tRNA binding arm H6850_02780 PF00133 tRNA synthetases class I (I, L, M and V) H6850_02780 PF08264 Anticodon-binding domain of tRNA H6850_02790 PF00691 OmpA family H6850_02805 PF00588 SpoU rRNA Methylase family H6850_02805 PF08032 RNA 2'-O ribose methyltransferase substrate binding H6850_02810 PF01351 Ribonuclease HII H6850_02815 PF02195 ParB-like nuclease domain H6850_02815 PF17762 HTH domain found in ParB protein H6850_02850 PF01327 Polypeptide deformylase H6850_02855 PF12327 FtsZ family, C-terminal domain H6850_02855 PF00091 Tubulin/FtsZ family, GTPase domain H6850_02860 PF01553 Acyltransferase H6850_02860 PF00501 AMP-binding enzyme H6850_02870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H6850_02870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H6850_02880 PF00749 tRNA synthetases class I (E and Q), catalytic domain H6850_02890 PF00749 tRNA synthetases class I (E and Q), catalytic domain H6850_02900 PF17757 UvrB interaction domain H6850_02900 PF12344 Ultra-violet resistance protein B H6850_02900 PF02151 UvrB/uvrC motif H6850_02900 PF04851 Type III restriction enzyme, res subunit H6850_02900 PF00271 Helicase conserved C-terminal domain H6850_02920 PF00830 Ribosomal L28 family H6850_02925 PF02576 RimP N-terminal domain H6850_02925 PF17384 RimP C-terminal SH3 domain H6850_02930 PF13184 NusA-like KH domain H6850_02930 PF08529 NusA N-terminal domain H6850_02930 PF00575 S1 RNA binding domain H6850_02935 PF04760 Translation initiation factor IF-2, N-terminal region H6850_02935 PF00009 Elongation factor Tu GTP binding domain H6850_02935 PF03144 Elongation factor Tu domain 2 H6850_02935 PF11987 Translation-initiation factor 2 H6850_02935 PF08364 Bacterial translation initiation factor IF-2 associated region H6850_02940 PF02033 Ribosome-binding factor A H6850_02960 PF00158 Sigma-54 interaction domain H6850_02960 PF02954 Bacterial regulatory protein, Fis family H6850_02960 PF00072 Response regulator receiver domain H6850_02965 PF01207 Dihydrouridine synthase (Dus) H6850_02970 PF00156 Phosphoribosyl transferase domain H6850_02975 PF00528 Binding-protein-dependent transport system inner membrane component H6850_02980 PF00528 Binding-protein-dependent transport system inner membrane component H6850_02990 PF00005 ABC transporter H6850_03005 PF00270 DEAD/DEAH box helicase H6850_03005 PF00271 Helicase conserved C-terminal domain H6850_03005 PF17764 3′ DNA-binding domain (3′BD) H6850_03005 PF18074 Primosomal protein N C-terminal domain H6850_03005 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H6850_03020 PF02594 Uncharacterised ACR, YggU family COG1872 H6850_03025 PF05443 ROS/MUCR transcriptional regulator protein H6850_03030 PF13640 2OG-Fe(II) oxygenase superfamily H6850_03030 PF18331 PKHD-type hydroxylase C-terminal domain H6850_03035 PF16916 Dimerisation domain of Zinc Transporter H6850_03035 PF01545 Cation efflux family H6850_03045 PF00953 Glycosyl transferase family 4 H6850_03045 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 H6850_03050 PF01783 Ribosomal L32p protein family H6850_03055 PF02504 Fatty acid synthesis protein H6850_03065 PF00750 tRNA synthetases class I (R) H6850_03065 PF03485 Arginyl tRNA synthetase N terminal domain H6850_03065 PF05746 DALR anticodon binding domain H6850_03075 PF00005 ABC transporter H6850_03075 PF12848 ABC transporter H6850_03080 PF01212 Beta-eliminating lyase H6850_03085 PF00664 ABC transporter transmembrane region H6850_03085 PF00005 ABC transporter H6850_03090 PF00664 ABC transporter transmembrane region H6850_03090 PF00005 ABC transporter H6850_03115 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H6850_03115 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H6850_03120 PF00929 Exonuclease H6850_03125 PF03219 TLC ATP/ADP transporter H6850_03130 PF12704 MacB-like periplasmic core domain H6850_03130 PF02687 FtsX-like permease family H6850_03135 PF01571 Aminomethyltransferase folate-binding domain H6850_03150 PF03023 Lipid II flippase MurJ H6850_03155 PF12804 MobA-like NTP transferase domain H6850_03155 PF00132 Bacterial transferase hexapeptide (six repeats) H6850_03175 PF00986 DNA gyrase B subunit, carboxyl terminus H6850_03175 PF01751 Toprim domain H6850_03175 PF00204 DNA gyrase B H6850_03175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H6850_03200 PF00528 Binding-protein-dependent transport system inner membrane component H6850_03210 PF02021 Uncharacterised protein family UPF0102 H6850_03215 PF01795 MraW methylase family H6850_03225 PF03717 Penicillin-binding Protein dimerisation domain H6850_03225 PF00905 Penicillin binding protein transpeptidase domain H6850_03235 PF00557 Metallopeptidase family M24 H6850_03240 PF01272 Transcription elongation factor, GreA/GreB, C-term H6850_03240 PF03449 Transcription elongation factor, N-terminal H6850_03245 PF04452 RNA methyltransferase H6850_03255 PF00467 KOW motif H6850_03255 PF02357 Transcription termination factor nusG H6850_03260 PF03946 Ribosomal protein L11, N-terminal domain H6850_03260 PF00298 Ribosomal protein L11, RNA binding domain H6850_03265 PF00687 Ribosomal protein L1p/L10e family H6850_03270 PF00466 Ribosomal protein L10 H6850_03275 PF16320 Ribosomal protein L7/L12 dimerisation domain H6850_03275 PF00542 Ribosomal protein L7/L12 C-terminal domain H6850_03280 PF04565 RNA polymerase Rpb2, domain 3 H6850_03280 PF04561 RNA polymerase Rpb2, domain 2 H6850_03280 PF04563 RNA polymerase beta subunit H6850_03280 PF10385 RNA polymerase beta subunit external 1 domain H6850_03280 PF04560 RNA polymerase Rpb2, domain 7 H6850_03280 PF00562 RNA polymerase Rpb2, domain 6 H6850_03285 PF00623 RNA polymerase Rpb1, domain 2 H6850_03285 PF04983 RNA polymerase Rpb1, domain 3 H6850_03285 PF05000 RNA polymerase Rpb1, domain 4 H6850_03285 PF04998 RNA polymerase Rpb1, domain 5 H6850_03285 PF04997 RNA polymerase Rpb1, domain 1 H6850_03290 PF02223 Thymidylate kinase H6850_03295 PF01230 HIT domain H6850_03300 PF13411 MerR HTH family regulatory protein H6850_03300 PF07739 TipAS antibiotic-recognition domain H6850_03305 PF00072 Response regulator receiver domain H6850_03330 PF01098 Cell cycle protein H6850_03345 PF03129 Anticodon binding domain H6850_03345 PF02824 TGS domain H6850_03345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H6850_03345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H6850_03370 PF00829 Ribosomal prokaryotic L21 protein H6850_03375 PF01016 Ribosomal L27 protein H6850_03380 PF01592 NifU-like N terminal domain H6850_03385 PF01018 GTP1/OBG H6850_03385 PF01926 50S ribosome-binding GTPase H6850_03395 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H6850_03395 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H6850_03395 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H6850_03395 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H6850_03400 PF17862 AAA+ lid domain H6850_03400 PF06480 FtsH Extracellular H6850_03400 PF01434 Peptidase family M41 H6850_03400 PF00004 ATPase family associated with various cellular activities (AAA) H6850_03430 PF02686 Glu-tRNAGln amidotransferase C subunit H6850_03435 PF01425 Amidase H6850_03440 PF02934 GatB/GatE catalytic domain H6850_03440 PF02637 GatB domain H6850_03460 PF03483 B3/4 domain H6850_03460 PF03484 tRNA synthetase B5 domain H6850_03460 PF03147 Ferredoxin-fold anticodon binding domain H6850_03460 PF01588 Putative tRNA binding domain H6850_03460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H6850_03470 PF06689 ClpX C4-type zinc finger H6850_03470 PF10431 C-terminal, D2-small domain, of ClpB protein H6850_03470 PF07724 AAA domain (Cdc48 subfamily) H6850_03480 PF01668 SmpB protein H6850_03485 PF00701 Dihydrodipicolinate synthetase family H6850_03500 PF00154 recA bacterial DNA recombination protein H6850_03505 PF03481 Putative GTP-binding controlling metal-binding H6850_03505 PF01300 Telomere recombination H6850_03510 PF02774 Semialdehyde dehydrogenase, dimerisation domain H6850_03510 PF01118 Semialdehyde dehydrogenase, NAD binding domain H6850_03525 PF13416 Bacterial extracellular solute-binding protein H6850_03550 PF00570 HRDC domain H6850_03550 PF01612 3'-5' exonuclease H6850_03555 PF00444 Ribosomal protein L36 H6850_03565 PF00216 Bacterial DNA-binding protein H6850_03575 PF00462 Glutaredoxin H6850_03585 PF00999 Sodium/hydrogen exchanger family H6850_03590 PF02875 Mur ligase family, glutamate ligase domain H6850_03590 PF08245 Mur ligase middle domain H6850_03590 PF01225 Mur ligase family, catalytic domain H6850_03600 PF00005 ABC transporter H6850_03600 PF12848 ABC transporter H6850_03605 PF03033 Glycosyltransferase family 28 N-terminal domain H6850_03605 PF04101 Glycosyltransferase family 28 C-terminal domain H6850_03610 PF00551 Formyl transferase H6850_03610 PF02911 Formyl transferase, C-terminal domain H6850_03620 PF03462 PCRF domain H6850_03620 PF00472 RF-1 domain H6850_03625 PF17827 PrmC N-terminal domain H6850_03625 PF05175 Methyltransferase small domain H6850_03655 PF00004 ATPase family associated with various cellular activities (AAA) H6850_03655 PF10431 C-terminal, D2-small domain, of ClpB protein H6850_03655 PF07724 AAA domain (Cdc48 subfamily) H6850_03660 PF00227 Proteasome subunit H6850_03665 PF02811 PHP domain H6850_03665 PF14579 Helix-hairpin-helix motif H6850_03665 PF07733 Bacterial DNA polymerase III alpha NTPase domain H6850_03665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H6850_03680 PF16200 C-terminal region of band_7 H6850_03680 PF01145 SPFH domain / Band 7 family H6850_03690 PF01380 SIS domain H6850_03695 PF01590 GAF domain H6850_03695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H6850_03695 PF00512 His Kinase A (phospho-acceptor) domain H6850_03695 PF00360 Phytochrome region H6850_03695 PF08446 PAS fold H6850_03700 PF00497 Bacterial extracellular solute-binding proteins, family 3 H6850_03705 PF03652 Holliday junction resolvase H6850_03745 PF00664 ABC transporter transmembrane region H6850_03745 PF00005 ABC transporter H6850_03755 PF00398 Ribosomal RNA adenine dimethylase H6850_03760 PF08471 Class II vitamin B12-dependent ribonucleotide reductase H6850_03760 PF02867 Ribonucleotide reductase, barrel domain H6850_03765 PF01336 OB-fold nucleic acid binding domain H6850_03765 PF00152 tRNA synthetases class II (D, K and N) H6850_03765 PF02938 GAD domain H6850_03780 PF17820 PDZ domain H6850_03780 PF13180 PDZ domain H6850_03785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H6850_03790 PF00675 Insulinase (Peptidase family M16) H6850_03790 PF05193 Peptidase M16 inactive domain H6850_03795 PF05193 Peptidase M16 inactive domain H6850_03805 PF00476 DNA polymerase family A H6850_03805 PF01612 3'-5' exonuclease H6850_03810 PF01751 Toprim domain H6850_03810 PF13368 Topoisomerase C-terminal repeat H6850_03810 PF01396 Topoisomerase DNA binding C4 zinc finger H6850_03810 PF01131 DNA topoisomerase H6850_03815 PF00849 RNA pseudouridylate synthase H6850_03815 PF01479 S4 domain H6850_03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H6850_03820 PF00072 Response regulator receiver domain H6850_03820 PF13188 PAS domain H6850_03820 PF08448 PAS fold H6850_03820 PF00512 His Kinase A (phospho-acceptor) domain H6850_03830 PF01250 Ribosomal protein S6 H6850_03835 PF01084 Ribosomal protein S18 H6850_03840 PF01541 GIY-YIG catalytic domain H6850_03840 PF02151 UvrB/uvrC motif H6850_03840 PF08459 UvrC Helix-hairpin-helix N-terminal H6850_03840 PF12826 Helix-hairpin-helix motif H6850_03845 PF02881 SRP54-type protein, helical bundle domain H6850_03845 PF00448 SRP54-type protein, GTPase domain H6850_03850 PF02021 Uncharacterised protein family UPF0102 H6850_03855 PF08245 Mur ligase middle domain H6850_03855 PF01225 Mur ligase family, catalytic domain H6850_03855 PF02875 Mur ligase family, glutamate ligase domain H6850_03860 PF00293 NUDIX domain H6850_03875 PF13520 Amino acid permease H6850_03880 PF01782 RimM N-terminal domain H6850_03880 PF05239 PRC-barrel domain H6850_03900 PF02673 Bacitracin resistance protein BacA H6850_03920 PF00342 Phosphoglucose isomerase H6850_03945 PF00707 Translation initiation factor IF-3, C-terminal domain H6850_03945 PF05198 Translation initiation factor IF-3, N-terminal domain H6850_03950 PF03840 Preprotein translocase SecG subunit H6850_03955 PF01176 Translation initiation factor 1A / IF-1 H6850_03960 PF00533 BRCA1 C Terminus (BRCT) domain H6850_03960 PF01653 NAD-dependent DNA ligase adenylation domain H6850_03960 PF03120 NAD-dependent DNA ligase OB-fold domain H6850_03960 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H6850_03960 PF12826 Helix-hairpin-helix motif H6850_03965 PF09190 DALR domain H6850_03965 PF01406 tRNA synthetases class I (C) catalytic domain H6850_03970 PF02129 X-Pro dipeptidyl-peptidase (S15 family) H6850_03980 PF00437 Type II/IV secretion system protein H6850_03990 PF01327 Polypeptide deformylase H6850_04010 PF05947 Type VI secretion system, TssF H6850_04020 PF00497 Bacterial extracellular solute-binding proteins, family 3 H6850_04030 PF02660 Glycerol-3-phosphate acyltransferase H6850_04040 PF04972 BON domain H6850_04045 PF11967 Recombination protein O N terminal H6850_04045 PF02565 Recombination protein O C terminal H6850_04050 PF01728 FtsJ-like methyltransferase H6850_04055 PF00459 Inositol monophosphatase family H6850_04060 PF01132 Elongation factor P (EF-P) OB domain H6850_04060 PF08207 Elongation factor P (EF-P) KOW-like domain H6850_04060 PF09285 Elongation factor P, C-terminal H6850_04070 PF00312 Ribosomal protein S15 H6850_04075 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H6850_04075 PF00575 S1 RNA binding domain H6850_04075 PF03725 3' exoribonuclease family, domain 2 H6850_04075 PF00013 KH domain H6850_04075 PF01138 3' exoribonuclease family, domain 1 H6850_04080 PF00905 Penicillin binding protein transpeptidase domain H6850_04080 PF03717 Penicillin-binding Protein dimerisation domain H6850_04100 PF02653 Branched-chain amino acid transport system / permease component H6850_04105 PF00005 ABC transporter H6850_04110 PF18073 Rubredoxin metal binding domain H6850_04115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H6850_04175 PF01765 Ribosome recycling factor H6850_04180 PF00889 Elongation factor TS H6850_04185 PF00318 Ribosomal protein S2 H6850_04195 PF00692 dUTPase H6850_04200 PF02463 RecF/RecN/SMC N terminal domain H6850_04210 PF00595 PDZ domain H6850_04210 PF03572 Peptidase family S41 H6850_04220 PF07992 Pyridine nucleotide-disulphide oxidoreductase H6850_04225 PF00749 tRNA synthetases class I (E and Q), catalytic domain H6850_04230 PF07478 D-ala D-ala ligase C-terminus H6850_04230 PF01820 D-ala D-ala ligase N-terminus H6850_04240 PF00075 RNase H H6850_04245 PF00849 RNA pseudouridylate synthase H6850_04245 PF01479 S4 domain H6850_04250 PF03167 Uracil DNA glycosylase superfamily H6850_04255 PF01026 TatD related DNase H6850_04260 PF01521 Iron-sulphur cluster biosynthesis H6850_04265 PF07650 KH domain H6850_04265 PF01926 50S ribosome-binding GTPase H6850_04275 PF09397 Ftsk gamma domain H6850_04275 PF17854 FtsK alpha domain H6850_04275 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H6850_04275 PF01580 FtsK/SpoIIIE family H6850_04285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H6850_04285 PF07497 Rho termination factor, RNA-binding domain H6850_04285 PF07498 Rho termination factor, N-terminal domain H6850_04295 PF01709 Transcriptional regulator H6850_04325 PF07690 Major Facilitator Superfamily H6850_04330 PF00664 ABC transporter transmembrane region H6850_04330 PF00005 ABC transporter H6850_04350 PF02885 Glycosyl transferase family, helical bundle domain H6850_04350 PF00591 Glycosyl transferase family, a/b domain H6850_04350 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain H6850_04365 PF08264 Anticodon-binding domain of tRNA H6850_04365 PF00133 tRNA synthetases class I (I, L, M and V) H6850_04365 PF06827 Zinc finger found in FPG and IleRS H6850_04375 PF00005 ABC transporter H6850_04390 PF01416 tRNA pseudouridine synthase H6850_04400 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H6850_04400 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H6850_04425 PF02805 Metal binding domain of Ada H6850_04425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H6850_04425 PF12833 Helix-turn-helix domain H6850_04425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H6850_04430 PF00118 TCP-1/cpn60 chaperonin family H6850_04435 PF00166 Chaperonin 10 Kd subunit H6850_04445 PF01245 Ribosomal protein L19 H6850_04450 PF00939 Sodium:sulfate symporter transmembrane region H6850_04465 PF00365 Phosphofructokinase H6850_04470 PF02567 Phenazine biosynthesis-like protein H6850_04480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H6850_04480 PF02874 ATP synthase alpha/beta family, beta-barrel domain H6850_04485 PF00231 ATP synthase H6850_04490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H6850_04490 PF00306 ATP synthase alpha/beta chain, C terminal domain H6850_04490 PF02874 ATP synthase alpha/beta family, beta-barrel domain H6850_04495 PF00213 ATP synthase delta (OSCP) subunit H6850_04505 PF01343 Peptidase family S49 H6850_04510 PF03030 Inorganic H+ pyrophosphatase H6850_04515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H6850_04520 PF00692 dUTPase H6850_04525 PF03948 Ribosomal protein L9, C-terminal domain H6850_04525 PF01281 Ribosomal protein L9, N-terminal domain H6850_04540 PF00226 DnaJ domain H6850_04540 PF01556 DnaJ C terminal domain H6850_04540 PF00684 DnaJ central domain H6850_04545 PF00012 Hsp70 protein H6850_04555 PF02511 Thymidylate synthase complementing protein H6850_04560 PF06689 ClpX C4-type zinc finger H6850_04560 PF07724 AAA domain (Cdc48 subfamily) H6850_04560 PF10431 C-terminal, D2-small domain, of ClpB protein H6850_04565 PF00574 Clp protease H6850_04570 PF01746 tRNA (Guanine-1)-methyltransferase H6850_04575 PF01367 5'-3' exonuclease, C-terminal SAM fold H6850_04575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H6850_04575 PF00476 DNA polymerase family A H6850_04580 PF01025 GrpE H6850_04585 PF00471 Ribosomal protein L33 H6850_04590 PF01546 Peptidase family M20/M25/M40 H6850_04590 PF07687 Peptidase dimerisation domain H6850_04600 PF00144 Beta-lactamase H6850_04605 PF12111 Polyribonucleotide phosphorylase C terminal H6850_04605 PF10150 Ribonuclease E/G family H6850_04605 PF00575 S1 RNA binding domain H6850_04610 PF00164 Ribosomal protein S12/S23 H6850_04615 PF00177 Ribosomal protein S7p/S5e H6850_04620 PF00009 Elongation factor Tu GTP binding domain H6850_04620 PF03144 Elongation factor Tu domain 2 H6850_04620 PF03764 Elongation factor G, domain IV H6850_04620 PF14492 Elongation Factor G, domain II H6850_04620 PF00679 Elongation factor G C-terminus H6850_04640 PF00035 Double-stranded RNA binding motif H6850_04640 PF14622 Ribonuclease-III-like H6850_04645 PF10502 Signal peptidase, peptidase S26 H6850_04650 PF02899 Phage integrase, N-terminal SAM-like domain H6850_04650 PF00589 Phage integrase family H6850_04655 PF02559 CarD-like/TRCF domain H6850_04655 PF00270 DEAD/DEAH box helicase H6850_04655 PF00271 Helicase conserved C-terminal domain H6850_04655 PF03461 TRCF domain H6850_04655 PF17757 UvrB interaction domain H6850_04675 PF01297 Zinc-uptake complex component A periplasmic H6850_04685 PF06715 Gp5 C-terminal repeat (3 copies) H6850_04685 PF04717 Type VI secretion system, phage-baseplate injector H6850_04690 PF01252 Signal peptidase (SPase) II H6850_04695 PF00163 Ribosomal protein S4/S9 N-terminal domain H6850_04695 PF01479 S4 domain H6850_04700 PF07676 WD40-like Beta Propeller Repeat H6850_04700 PF04052 TolB amino-terminal domain H6850_04715 PF02699 Preprotein translocase subunit H6850_04740 PF01628 HrcA protein C terminal domain