locus-tag class description IPN28_00015 IPR036412 HAD-like superfamily IPN28_00015 IPR023214 HAD superfamily IPN28_00020 IPR001270 ClpA/B family IPN28_00020 IPR004176 Clp, N-terminal IPN28_00020 IPR036628 Clp, N-terminal domain superfamily IPN28_00020 IPR019489 Clp ATPase, C-terminal IPN28_00020 IPR003959 ATPase, AAA-type, core IPN28_00020 IPR003593 AAA+ ATPase domain IPN28_00020 IPR001943 UVR domain IPN28_00020 IPR041546 ClpA/ClpB, AAA lid domain IPN28_00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00055 IPR002528 Multi antimicrobial extrusion protein IPN28_00075 IPR023696 Ureohydrolase domain superfamily IPN28_00075 IPR037138 Histone deacetylase domain superfamily IPN28_00075 IPR023801 Histone deacetylase domain IPN28_00075 IPR000286 Histone deacetylase family IPN28_00115 IPR041963 BsuBI/PstI restriction endonuclease, C-terminal domain superfamily IPN28_00115 IPR041454 BsuBI/PstI restriction endonuclease, HTH domain IPN28_00115 IPR041962 BsuBI/PstI restriction endonuclease, N-terminal domain superfamily IPN28_00115 IPR009528 BsuBI/PstI restriction endonuclease domain IPN28_00130 IPR036086 ParB/Sulfiredoxin superfamily IPN28_00130 IPR003115 ParB/Sulfiredoxin IPN28_00130 IPR004437 ParB/RepB/Spo0J partition protein IPN28_00130 IPR041468 ParB/Spo0J, HTH domain IPN28_00150 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain IPN28_00150 IPR041459 Polyvalent protein, metallopeptidase domain IPN28_00150 IPR006171 TOPRIM domain IPN28_00150 IPR013610 Domain of unknown function DUF1738 IPN28_00190 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00190 IPR003688 Type IV secretion system protein TraG/VirD4 IPN28_00235 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL IPN28_00235 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPN28_00235 IPR001296 Glycosyl transferase, family 1 IPN28_00245 IPR011991 ArsR-like helix-turn-helix domain IPN28_00245 IPR001845 HTH ArsR-type DNA-binding domain IPN28_00245 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_00245 IPR036390 Winged helix DNA-binding domain superfamily IPN28_00250 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IPN28_00250 IPR002347 Short-chain dehydrogenase/reductase SDR IPN28_00250 IPR020904 Short-chain dehydrogenase/reductase, conserved site IPN28_00250 IPR036291 NAD(P)-binding domain superfamily IPN28_00255 IPR008145 Guanylate kinase/L-type calcium channel beta subunit IPN28_00255 IPR020590 Guanylate kinase, conserved site IPN28_00255 IPR017665 Guanylate kinase IPN28_00255 IPR008144 Guanylate kinase-like domain IPN28_00255 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00265 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site IPN28_00265 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal IPN28_00265 IPR011530 Ribosomal RNA adenine dimethylase IPN28_00265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_00265 IPR023165 rRNA adenine dimethylase-like IPN28_00265 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm IPN28_00270 IPR027304 Trigger factor/SurA domain superfamily IPN28_00270 IPR023034 Peptidyl-prolyl isomerase SurA IPN28_00270 IPR015391 SurA N-terminal IPN28_00270 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type IPN28_00275 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase IPN28_00275 IPR036291 NAD(P)-binding domain superfamily IPN28_00285 IPR005751 ATP-dependent DNA helicase PcrA IPN28_00285 IPR014017 UvrD-like DNA helicase, C-terminal IPN28_00285 IPR013986 DExx box DNA helicase domain superfamily IPN28_00285 IPR034739 UvrD/AddA helicase, N-terminal IPN28_00285 IPR014016 UvrD-like helicase, ATP-binding domain IPN28_00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00285 IPR000212 DNA helicase, UvrD/REP type IPN28_00290 IPR000160 GGDEF domain IPN28_00290 IPR029787 Nucleotide cyclase IPN28_00290 IPR001789 Signal transduction response regulator, receiver domain IPN28_00290 IPR011006 CheY-like superfamily IPN28_00300 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_00300 IPR004482 Mg chelatase-related protein IPN28_00300 IPR025158 Mg chelatase-related protein, C-terminal domain IPN28_00300 IPR000523 Magnesium chelatase ChlI domain IPN28_00300 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00300 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_00300 IPR001208 MCM domain IPN28_00300 IPR003593 AAA+ ATPase domain IPN28_00335 IPR001310 Histidine triad (HIT) protein IPN28_00335 IPR011146 HIT-like domain IPN28_00335 IPR036265 HIT-like superfamily IPN28_00335 IPR019808 Histidine triad, conserved site IPN28_00340 IPR009010 Aspartate decarboxylase-like domain superfamily IPN28_00340 IPR003190 Aspartate decarboxylase IPN28_00350 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily IPN28_00350 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IPN28_00350 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IPN28_00350 IPR015956 Penicillin-binding protein, C-terminal domain superfamily IPN28_00350 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IPN28_00350 IPR012338 Beta-lactamase/transpeptidase-like IPN28_00355 IPR013766 Thioredoxin domain IPN28_00355 IPR036249 Thioredoxin-like superfamily IPN28_00355 IPR005746 Thioredoxin IPN28_00360 IPR014152 DNA helicase subunit AddA IPN28_00360 IPR000212 DNA helicase, UvrD/REP type IPN28_00360 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00360 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type IPN28_00360 IPR011335 Restriction endonuclease type II-like IPN28_00360 IPR014016 UvrD-like helicase, ATP-binding domain IPN28_00360 IPR034739 UvrD/AddA helicase, N-terminal IPN28_00360 IPR014017 UvrD-like DNA helicase, C-terminal IPN28_00370 IPR005835 Nucleotidyl transferase domain IPN28_00370 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_00375 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE IPN28_00375 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00385 IPR035965 PAS domain superfamily IPN28_00385 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_00385 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_00385 IPR005467 Histidine kinase domain IPN28_00385 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_00385 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_00385 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_00390 IPR042172 Adenosylhomocysteinase-like superfamily IPN28_00390 IPR000043 Adenosylhomocysteinase-like IPN28_00390 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IPN28_00390 IPR036291 NAD(P)-binding domain superfamily IPN28_00390 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site IPN28_00405 IPR040442 Pyruvate kinase-like domain superfamily IPN28_00405 IPR000032 Phosphocarrier protein HPr-like IPN28_00405 IPR035895 HPr-like superfamily IPN28_00405 IPR008279 PEP-utilising enzyme, mobile domain IPN28_00405 IPR000121 PEP-utilising enzyme, C-terminal IPN28_00405 IPR023151 PEP-utilising enzyme, conserved site IPN28_00405 IPR036637 Phosphohistidine domain superfamily IPN28_00405 IPR036618 PtsI, HPr-binding domain superfamily IPN28_00405 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IPN28_00405 IPR016152 Phosphotransferase/anion transporter IPN28_00405 IPR006318 Phosphotransferase system, enzyme I-like IPN28_00405 IPR002178 PTS EIIA type-2 domain IPN28_00405 IPR008731 Phosphotransferase system, enzyme I N-terminal IPN28_00405 IPR004715 Phosphotransferase system, IIA component fructose subfamily IPN28_00410 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00410 IPR005337 RapZ-like family IPN28_00415 IPR025919 Stimulus-sensing domain IPN28_00415 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_00415 IPR025908 Sensor N-terminal transmembrane domain IPN28_00415 IPR003660 HAMP domain IPN28_00415 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_00415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_00415 IPR005467 Histidine kinase domain IPN28_00415 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_00415 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_00420 IPR001789 Signal transduction response regulator, receiver domain IPN28_00420 IPR039420 Transcriptional regulatory protein WalR-like IPN28_00420 IPR001867 OmpR/PhoB-type DNA-binding domain IPN28_00420 IPR016032 Signal transduction response regulator, C-terminal effector IPN28_00420 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_00420 IPR011006 CheY-like superfamily IPN28_00425 IPR001645 Folylpolyglutamate synthetase IPN28_00425 IPR013221 Mur ligase, central IPN28_00425 IPR036615 Mur ligase, C-terminal domain superfamily IPN28_00425 IPR004101 Mur ligase, C-terminal IPN28_00425 IPR036565 Mur-like, catalytic domain superfamily IPN28_00425 IPR018109 Folylpolyglutamate synthetase, conserved site IPN28_00430 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit IPN28_00430 IPR029045 ClpP/crotonase-like domain superfamily IPN28_00430 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal IPN28_00430 IPR034733 Acetyl-CoA carboxylase IPN28_00435 IPR002028 Tryptophan synthase, alpha chain IPN28_00435 IPR018204 Tryptophan synthase, alpha chain, active site IPN28_00435 IPR013785 Aldolase-type TIM barrel IPN28_00435 IPR011060 Ribulose-phosphate binding barrel IPN28_00445 IPR001926 Pyridoxal-phosphate dependent enzyme IPN28_00445 IPR006654 Tryptophan synthase, beta chain IPN28_00445 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPN28_00445 IPR006653 Tryptophan synthase, beta chain, conserved site IPN28_00445 IPR023026 Tryptophan synthase beta chain/beta chain-like IPN28_00450 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) IPN28_00450 IPR013785 Aldolase-type TIM barrel IPN28_00450 IPR011060 Ribulose-phosphate binding barrel IPN28_00455 IPR018089 Orotidine 5'-phosphate decarboxylase, active site IPN28_00455 IPR014732 Orotidine 5'-phosphate decarboxylase IPN28_00455 IPR013785 Aldolase-type TIM barrel IPN28_00455 IPR011060 Ribulose-phosphate binding barrel IPN28_00455 IPR001754 Orotidine 5'-phosphate decarboxylase domain IPN28_00465 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IPN28_00465 IPR005685 Integration host factor, beta subunit IPN28_00465 IPR020816 Histone-like DNA-binding protein, conserved site IPN28_00465 IPR000119 Histone-like DNA-binding protein IPN28_00470 IPR022967 RNA-binding domain, S1 IPN28_00470 IPR012340 Nucleic acid-binding, OB-fold IPN28_00470 IPR000110 Ribosomal protein S1 IPN28_00470 IPR003029 S1 domain IPN28_00475 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00475 IPR003136 Cytidylate kinase IPN28_00475 IPR011994 Cytidylate kinase domain IPN28_00485 IPR001986 Enolpyruvate transferase domain IPN28_00485 IPR036968 Enolpyruvate transferase domain superfamily IPN28_00485 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta IPN28_00485 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site IPN28_00485 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase IPN28_00490 IPR001633 EAL domain IPN28_00490 IPR035919 EAL domain superfamily IPN28_00490 IPR000160 GGDEF domain IPN28_00490 IPR005330 MHYT domain IPN28_00490 IPR029787 Nucleotide cyclase IPN28_00500 IPR011059 Metal-dependent hydrolase, composite domain superfamily IPN28_00500 IPR002195 Dihydroorotase, conserved site IPN28_00500 IPR032466 Metal-dependent hydrolase IPN28_00500 IPR006680 Amidohydrolase-related IPN28_00500 IPR004722 Dihydroorotase IPN28_00505 IPR018234 GTP cyclohydrolase I, conserved site IPN28_00505 IPR020602 GTP cyclohydrolase I domain IPN28_00505 IPR001474 GTP cyclohydrolase I IPN28_00510 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPN28_00510 IPR032678 tRNA synthetases class I, catalytic domain IPN28_00510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_00510 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase IPN28_00510 IPR015803 Cysteine-tRNA ligase IPN28_00510 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR IPN28_00520 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain IPN28_00520 IPR008978 HSP20-like chaperone IPN28_00520 IPR002068 Alpha crystallin/Hsp20 domain IPN28_00535 IPR036567 Ribosome hibernation promotion factor-like IPN28_00535 IPR003489 Ribosome hibernation promoting factor/RaiA IPN28_00535 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal IPN28_00535 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily IPN28_00535 IPR034694 Ribosome hibernation promoting factor, long/plastid IPN28_00540 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily IPN28_00540 IPR007634 RNA polymerase sigma factor 54, DNA-binding IPN28_00540 IPR007046 RNA polymerase sigma factor 54, core-binding domain IPN28_00540 IPR000394 RNA polymerase sigma factor 54 IPN28_00550 IPR003593 AAA+ ATPase domain IPN28_00550 IPR003439 ABC transporter-like IPN28_00550 IPR017871 ABC transporter, conserved site IPN28_00550 IPR030921 LPS export ABC transporter, ATP-binding protein LptB IPN28_00550 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00555 IPR004778 Homoserine/Threonine efflux protein IPN28_00555 IPR001123 Amino acid exporter protein, LeuE-type IPN28_00570 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type IPN28_00570 IPR000644 CBS domain IPN28_00570 IPR001347 Sugar isomerase (SIS) IPN28_00570 IPR035474 KpsF-like, SIS domain IPN28_00575 IPR036397 Ribonuclease H superfamily IPN28_00575 IPR002562 3'-5' exonuclease domain IPN28_00575 IPR006292 Ribonuclease D IPN28_00575 IPR002121 HRDC domain IPN28_00575 IPR010997 HRDC-like superfamily IPN28_00575 IPR012337 Ribonuclease H-like superfamily IPN28_00585 IPR011006 CheY-like superfamily IPN28_00585 IPR001789 Signal transduction response regulator, receiver domain IPN28_00585 IPR029787 Nucleotide cyclase IPN28_00585 IPR000160 GGDEF domain IPN28_00615 IPR034137 RecR, TOPRIM domain IPN28_00615 IPR000093 DNA recombination protein RecR IPN28_00615 IPR023627 Recombination protein RecR IPN28_00615 IPR023628 Recombination protein RecR, C4-type zinc finger IPN28_00615 IPR015967 Recombination protein RecR, conserved site IPN28_00615 IPR006171 TOPRIM domain IPN28_00635 IPR002543 FtsK domain IPN28_00635 IPR018541 FtsK gamma domain IPN28_00635 IPR025199 DNA translocase FtsK, 4TM region IPN28_00635 IPR003593 AAA+ ATPase domain IPN28_00635 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_00635 IPR036390 Winged helix DNA-binding domain superfamily IPN28_00635 IPR041027 FtsK alpha domain IPN28_00635 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00650 IPR001086 Prephenate dehydratase IPN28_00650 IPR010952 Chorismate mutase, gammaproteobacteria IPN28_00650 IPR002701 Chorismate mutase II, prokaryotic-type IPN28_00650 IPR002912 ACT domain IPN28_00650 IPR018528 Prephenate dehydratase, conserved site IPN28_00650 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase IPN28_00650 IPR036263 Chorismate mutase type II superfamily IPN28_00650 IPR036979 Chorismate mutase domain superfamily IPN28_00655 IPR036909 Cytochrome c-like domain superfamily IPN28_00655 IPR009056 Cytochrome c-like domain IPN28_00655 IPR002327 Cytochrome c, class IA/ IB IPN28_00665 IPR007197 Radical SAM IPN28_00665 IPR025895 Lysine-2,3-aminomutase, C-terminal domain IPN28_00665 IPR013785 Aldolase-type TIM barrel IPN28_00665 IPR022459 Lysine-2,3-aminomutase IPN28_00665 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase IPN28_00670 IPR023042 Peptidase M17, leucine aminopeptidase IPN28_00670 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B IPN28_00670 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal IPN28_00670 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal IPN28_00685 IPR007428 MlaA lipoprotein IPN28_00710 IPR032781 ABC-transporter extension domain IPN28_00710 IPR017871 ABC transporter, conserved site IPN28_00710 IPR003439 ABC transporter-like IPN28_00710 IPR003593 AAA+ ATPase domain IPN28_00710 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_00710 IPR022374 Energy-dependent translational throttle protein EttA IPN28_00725 IPR011257 DNA glycosylase IPN28_00725 IPR004597 DNA-3-methyladenine glycosylase I IPN28_00725 IPR005019 Methyladenine glycosylase IPN28_00740 IPR031357 Stealth protein CR3, conserved region 3 IPN28_00740 IPR001296 Glycosyl transferase, family 1 IPN28_00740 IPR031358 Stealth protein CR1, conserved region 1 IPN28_00740 IPR021520 Stealth protein CR2, conserved region 2 IPN28_00740 IPR031356 Stealth protein CR4, conserved region 4 IPN28_00750 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_00750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_00750 IPR004839 Aminotransferase, class I/classII IPN28_00750 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IPN28_00755 IPR000644 CBS domain IPN28_00755 IPR005496 Integral membrane protein TerC IPN28_00755 IPR005170 Transporter-associated domain IPN28_00755 IPR036318 FAD-binding, type PCMH-like superfamily IPN28_00755 IPR016169 FAD-binding, type PCMH, subdomain 2 IPN28_00760 IPR003029 S1 domain IPN28_00760 IPR022967 RNA-binding domain, S1 IPN28_00760 IPR004659 Ribonuclease E/G IPN28_00760 IPR028878 Ribonuclease E IPN28_00760 IPR012340 Nucleic acid-binding, OB-fold IPN28_00760 IPR021968 Polyribonucleotide phosphorylase C-terminal IPN28_00760 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G IPN28_00765 IPR018392 LysM domain IPN28_00765 IPR011055 Duplicated hybrid motif IPN28_00765 IPR013731 Opacity-associated protein A, N-terminal IPN28_00765 IPR016047 Peptidase M23 IPN28_00785 IPR024791 Cytochrome c oxidase subunit III IPN28_00785 IPR033945 Cytochrome c oxidase subunit III domain IPN28_00785 IPR000298 Cytochrome c oxidase subunit III-like IPN28_00785 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle IPN28_00785 IPR035973 Cytochrome c oxidase subunit III-like superfamily IPN28_00790 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 IPN28_00790 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily IPN28_00830 IPR002347 Short-chain dehydrogenase/reductase SDR IPN28_00830 IPR020904 Short-chain dehydrogenase/reductase, conserved site IPN28_00830 IPR036291 NAD(P)-binding domain superfamily IPN28_00835 IPR006369 Protohaem IX farnesyltransferase IPN28_00835 IPR000537 UbiA prenyltransferase family IPN28_00835 IPR030470 UbiA prenyltransferase conserved site IPN28_00845 IPR014241 Cytochrome c oxidase, subunit I bacterial type IPN28_00845 IPR033944 Cytochrome c oxidase subunit I domain IPN28_00845 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site IPN28_00845 IPR000883 Cytochrome c oxidase subunit I IPN28_00845 IPR036927 Cytochrome c oxidase-like, subunit I superfamily IPN28_00845 IPR023616 Cytochrome c oxidase-like, subunit I domain IPN28_00850 IPR034210 Cytochrome c oxidase subunit 2, C-terminal IPN28_00850 IPR002429 Cytochrome c oxidase subunit II-like C-terminal IPN28_00850 IPR001505 Copper centre Cu(A) IPN28_00850 IPR008972 Cupredoxin IPN28_00850 IPR014222 Cytochrome c oxidase, subunit II IPN28_00850 IPR005728 Rickettsial palindromic element IPN28_00850 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily IPN28_00850 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain IPN28_00855 IPR029028 Alpha/beta knot methyltransferases IPN28_00855 IPR015947 PUA-like superfamily IPN28_00855 IPR006700 Ribosomal RNA small subunit methyltransferase E IPN28_00855 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPN28_00860 IPR006370 4-hydroxybenzoate polyprenyltransferase-like IPN28_00860 IPR000537 UbiA prenyltransferase family IPN28_00860 IPR039653 Prenyltransferase IPN28_00860 IPR030470 UbiA prenyltransferase conserved site IPN28_00865 IPR007780 NAD-glutamate dehydrogenase, bacteria IPN28_00865 IPR028971 NAD-glutamate dehydrogenase IPN28_00865 IPR036291 NAD(P)-binding domain superfamily IPN28_00885 IPR001826 RHS protein IPN28_00885 IPR022385 Rhs repeat-associated core IPN28_00890 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPN28_00890 IPR006324 Glutathione-disulphide reductase IPN28_00890 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_00890 IPR023753 FAD/NAD(P)-binding domain IPN28_00890 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IPN28_00890 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IPN28_00890 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPN28_00895 IPR025714 Methyltransferase domain IPN28_00895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_00905 IPR033134 Asp/Glu racemase, active site 2 IPN28_00905 IPR004380 Aspartate racemase IPN28_00905 IPR001920 Asp/Glu racemase IPN28_00905 IPR015942 Asp/Glu/hydantoin racemase IPN28_00905 IPR018187 Asp/Glu racemase, active site 1 IPN28_00910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_00910 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_00910 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IPN28_00910 IPR004839 Aminotransferase, class I/classII IPN28_00910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_00915 IPR042099 AMP-dependent synthetase-like superfamily IPN28_00915 IPR000873 AMP-dependent synthetase/ligase IPN28_00915 IPR025110 AMP-binding enzyme, C-terminal domain IPN28_00915 IPR020845 AMP-binding, conserved site IPN28_00915 IPR005914 Acetoacetyl-CoA synthase IPN28_00925 IPR013766 Thioredoxin domain IPN28_00925 IPR017937 Thioredoxin, conserved site IPN28_00925 IPR036249 Thioredoxin-like superfamily IPN28_00925 IPR023555 Thiol-disulphide oxidoreductase ResA IPN28_00925 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPN28_00935 IPR000700 PAS-associated, C-terminal IPN28_00935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_00935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_00935 IPR005467 Histidine kinase domain IPN28_00935 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_00935 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_00935 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_00945 IPR004046 Glutathione S-transferase, C-terminal IPN28_00945 IPR010987 Glutathione S-transferase, C-terminal-like IPN28_00945 IPR036282 Glutathione S-transferase, C-terminal domain superfamily IPN28_00945 IPR040079 Glutathione Transferase family IPN28_00945 IPR004045 Glutathione S-transferase, N-terminal IPN28_00945 IPR036249 Thioredoxin-like superfamily IPN28_00950 IPR016174 Di-haem cytochrome, transmembrane IPN28_00950 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase IPN28_00955 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily IPN28_00955 IPR023480 Uncharacterised protein family UPF0312/YceI IPN28_00955 IPR007372 Lipid/polyisoprenoid-binding, YceI-like IPN28_00965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_00965 IPR004398 RNA methyltransferase, RsmD IPN28_00970 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site IPN28_00970 IPR036986 RNA-binding S4 domain superfamily IPN28_00970 IPR002942 RNA-binding S4 domain IPN28_00970 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F IPN28_00970 IPR006145 Pseudouridine synthase, RsuA/RluA IPN28_00970 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain IPN28_00970 IPR020103 Pseudouridine synthase, catalytic domain superfamily IPN28_00975 IPR028883 tRNA-specific adenosine deaminase IPN28_00975 IPR016193 Cytidine deaminase-like IPN28_00975 IPR002125 Cytidine and deoxycytidylate deaminase domain IPN28_00975 IPR016192 APOBEC/CMP deaminase, zinc-binding IPN28_00985 IPR011761 ATP-grasp fold IPN28_00985 IPR013815 ATP-grasp fold, subdomain 1 IPN28_00985 IPR016185 Pre-ATP-grasp domain superfamily IPN28_00985 IPR020560 Phosphoribosylglycinamide synthetase, C-domain IPN28_00985 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily IPN28_00985 IPR011054 Rudiment single hybrid motif IPN28_00985 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal IPN28_00985 IPR000115 Phosphoribosylglycinamide synthetase IPN28_00985 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IPN28_00985 IPR020559 Phosphoribosylglycinamide synthetase, conserved site IPN28_00990 IPR029510 Aldehyde dehydrogenase, glutamic acid active site IPN28_00990 IPR016162 Aldehyde dehydrogenase, N-terminal IPN28_00990 IPR015590 Aldehyde dehydrogenase domain IPN28_00990 IPR013321 Arc-type ribbon-helix-helix IPN28_00990 IPR016160 Aldehyde dehydrogenase, cysteine active site IPN28_00990 IPR016163 Aldehyde dehydrogenase, C-terminal IPN28_00990 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 IPN28_00990 IPR029041 FAD-linked oxidoreductase-like IPN28_00990 IPR016161 Aldehyde/histidinol dehydrogenase IPN28_00990 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain IPN28_00990 IPR024090 Proline dehydrogenase PutA, domain I IPN28_00990 IPR024082 Proline dehydrogenase PutA, domain II IPN28_00990 IPR010985 Ribbon-helix-helix IPN28_00990 IPR025703 Bifunctional protein PutA IPN28_00990 IPR002872 Proline dehydrogenase domain IPN28_00990 IPR024089 Proline dehydrogenase PutA, domain I/II IPN28_00995 IPR025824 OB-fold nucleic acid binding domain IPN28_00995 IPR020579 Exonuclease VII, large subunit, C-terminal IPN28_00995 IPR003753 Exonuclease VII, large subunit IPN28_01010 IPR003325 TerD domain IPN28_01015 IPR004837 Sodium/calcium exchanger membrane region IPN28_01015 IPR004481 Sodium/potassium/calcium exchanger IPN28_01020 IPR017115 Tellurite resistance, TerA IPN28_01020 IPR003325 TerD domain IPN28_01025 IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPN28_01025 IPR013780 Glycosyl hydrolase, all-beta IPN28_01025 IPR017853 Glycoside hydrolase superfamily IPN28_01025 IPR032091 Maltogenic Amylase, C-terminal IPN28_01055 IPR042174 DNA-binding RecF, domain 2 IPN28_01055 IPR003593 AAA+ ATPase domain IPN28_01055 IPR001238 DNA-binding, RecF IPN28_01055 IPR018078 DNA-binding, RecF, conserved site IPN28_01055 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01055 IPR003395 RecF/RecN/SMC, N-terminal IPN28_01065 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal IPN28_01065 IPR022637 DNA polymerase III, beta sliding clamp, central IPN28_01065 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal IPN28_01065 IPR001001 DNA polymerase III, beta sliding clamp IPN28_01080 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA IPN28_01080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_01080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_01080 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_01080 IPR005814 Aminotransferase class-III IPN28_01090 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01090 IPR004472 Dethiobiotin synthase BioD IPN28_01095 IPR004839 Aminotransferase, class I/classII IPN28_01095 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type IPN28_01095 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria IPN28_01095 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_01095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_01095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_01110 IPR010722 Biotin and thiamin synthesis-associated domain IPN28_01110 IPR013785 Aldolase-type TIM barrel IPN28_01110 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB IPN28_01110 IPR024177 Biotin synthase IPN28_01110 IPR006638 Elp3/MiaB/NifB IPN28_01110 IPR007197 Radical SAM IPN28_01115 IPR029001 Inosine triphosphate pyrophosphatase-like IPN28_01115 IPR015797 NUDIX hydrolase-like domain superfamily IPN28_01115 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein IPN28_01115 IPR000086 NUDIX hydrolase domain IPN28_01115 IPR020084 NUDIX hydrolase, conserved site IPN28_01120 IPR001957 Chromosomal replication control, initiator DnaA IPN28_01120 IPR024633 DnaA N-terminal domain IPN28_01120 IPR038454 DnaA, N-terminal domain superfamily IPN28_01120 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01120 IPR010921 Trp repressor/replication initiator IPN28_01120 IPR003593 AAA+ ATPase domain IPN28_01120 IPR013159 Chromosomal replication initiator, DnaA C-terminal IPN28_01120 IPR018312 Chromosomal replication control, initiator DnaA, conserved site IPN28_01120 IPR020591 Chromosomal replication control, initiator DnaA-like IPN28_01120 IPR013317 Chromosomal replication initiator protein DnaA IPN28_01125 IPR002583 Ribosomal protein S20 IPN28_01125 IPR036510 Ribosomal protein S20 superfamily IPN28_01135 IPR010979 Ribosomal protein S13-like, H2TH IPN28_01135 IPR020629 Formamidopyrimidine-DNA glycosylase IPN28_01135 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain IPN28_01135 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type IPN28_01135 IPR035937 MutM-like, N-terminal IPN28_01135 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding IPN28_01135 IPR010663 Zinc finger, FPG/IleRS-type IPN28_01170 IPR027410 TCP-1-like chaperonin intermediate domain superfamily IPN28_01170 IPR027413 GroEL-like equatorial domain superfamily IPN28_01170 IPR027409 GroEL-like apical domain superfamily IPN28_01170 IPR001844 Chaperonin Cpn60 IPN28_01170 IPR018370 Chaperonin Cpn60, conserved site IPN28_01170 IPR002423 Chaperonin Cpn60/TCP-1 family IPN28_01175 IPR020818 GroES chaperonin family IPN28_01175 IPR037124 GroES chaperonin superfamily IPN28_01175 IPR018369 Chaperonin GroES, conserved site IPN28_01175 IPR011032 GroES-like superfamily IPN28_01180 IPR009354 Usg-like IPN28_01185 IPR036010 2Fe-2S ferredoxin-like superfamily IPN28_01185 IPR012675 Beta-grasp domain superfamily IPN28_01185 IPR001055 Adrenodoxin IPN28_01185 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IPN28_01195 IPR023754 Heme A synthase, type 2 IPN28_01195 IPR003780 COX15/CtaA family IPN28_01235 IPR002123 Phospholipid/glycerol acyltransferase IPN28_01235 IPR020845 AMP-binding, conserved site IPN28_01235 IPR042099 AMP-dependent synthetase-like superfamily IPN28_01235 IPR000873 AMP-dependent synthetase/ligase IPN28_01235 IPR023775 Bifunctional protein Aas IPN28_01240 IPR006162 Phosphopantetheine attachment site IPN28_01240 IPR009081 Phosphopantetheine binding ACP domain IPN28_01240 IPR003231 Acyl carrier protein (ACP) IPN28_01240 IPR036736 ACP-like superfamily IPN28_01245 IPR014031 Beta-ketoacyl synthase, C-terminal IPN28_01245 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IPN28_01245 IPR000794 Beta-ketoacyl synthase IPN28_01245 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 IPN28_01245 IPR014030 Beta-ketoacyl synthase, N-terminal IPN28_01245 IPR018201 Beta-ketoacyl synthase, active site IPN28_01245 IPR016039 Thiolase-like IPN28_01250 IPR003770 Endolytic murein transglycosylase IPN28_01270 IPR017932 Glutamine amidotransferase type 2 domain IPN28_01270 IPR033738 Asparagine synthase, N-terminal domain IPN28_01270 IPR001962 Asparagine synthase IPN28_01270 IPR006426 Asparagine synthase, glutamine-hydrolyzing IPN28_01270 IPR029055 Nucleophile aminohydrolases, N-terminal IPN28_01280 IPR001509 NAD-dependent epimerase/dehydratase IPN28_01280 IPR036291 NAD(P)-binding domain superfamily IPN28_01285 IPR001296 Glycosyl transferase, family 1 IPN28_01310 IPR028096 EfeO-type cupredoxin-like domain IPN28_01310 IPR008972 Cupredoxin IPN28_01345 IPR002068 Alpha crystallin/Hsp20 domain IPN28_01345 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain IPN28_01345 IPR008978 HSP20-like chaperone IPN28_01350 IPR002068 Alpha crystallin/Hsp20 domain IPN28_01350 IPR008978 HSP20-like chaperone IPN28_01390 IPR005618 Outer membrane protein, OmpW IPN28_01390 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IPN28_01395 IPR004714 Cytochrome oxidase maturation protein cbb3-type IPN28_01400 IPR023299 P-type ATPase, cytoplasmic domain N IPN28_01400 IPR018303 P-type ATPase, phosphorylation site IPN28_01400 IPR006121 Heavy metal-associated domain, HMA IPN28_01400 IPR001757 P-type ATPase IPN28_01400 IPR023298 P-type ATPase, transmembrane domain superfamily IPN28_01400 IPR027256 P-type ATPase, subfamily IB IPN28_01400 IPR036163 Heavy metal-associated domain superfamily IPN28_01400 IPR017969 Heavy-metal-associated, conserved site IPN28_01400 IPR023214 HAD superfamily IPN28_01400 IPR036412 HAD-like superfamily IPN28_01400 IPR008250 P-type ATPase, A domain superfamily IPN28_01410 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPN28_01410 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPN28_01410 IPR032879 FixG, C-terminal immunoglobulin-like domain IPN28_01410 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG IPN28_01410 IPR013783 Immunoglobulin-like fold IPN28_01415 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal IPN28_01415 IPR004678 Cytochrome c oxidase cbb3-type, subunit III IPN28_01415 IPR008168 Cytochrome c, class IC IPN28_01415 IPR009056 Cytochrome c-like domain IPN28_01415 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily IPN28_01415 IPR036909 Cytochrome c-like domain superfamily IPN28_01430 IPR036927 Cytochrome c oxidase-like, subunit I superfamily IPN28_01430 IPR004677 Cytochrome c oxidase cbb3-type, subunit I IPN28_01430 IPR000883 Cytochrome c oxidase subunit I IPN28_01430 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site IPN28_01430 IPR023616 Cytochrome c oxidase-like, subunit I domain IPN28_01460 IPR001525 C-5 cytosine methyltransferase IPN28_01460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_01485 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily IPN28_01485 IPR021029 DNA polymerase III, tau subunit, domain V IPN28_01485 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01485 IPR012763 DNA polymerase III, subunit gamma/ tau IPN28_01485 IPR001270 ClpA/B family IPN28_01485 IPR022754 DNA polymerase III, gamma subunit, domain III IPN28_01485 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV IPN28_01485 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IPN28_01485 IPR003593 AAA+ ATPase domain IPN28_01490 IPR004401 Nucleoid-associated protein YbaB/EbfC family IPN28_01490 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily IPN28_01510 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily IPN28_01510 IPR004401 Nucleoid-associated protein YbaB/EbfC family IPN28_01515 IPR004573 rRNA small subunit methyltransferase B IPN28_01515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_01515 IPR035926 NusB-like superfamily IPN28_01515 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type IPN28_01515 IPR023267 RNA (C5-cytosine) methyltransferase IPN28_01515 IPR006027 NusB/RsmB/TIM44 IPN28_01515 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site IPN28_01530 IPR013785 Aldolase-type TIM barrel IPN28_01530 IPR011060 Ribulose-phosphate binding barrel IPN28_01530 IPR026019 Ribulose-phosphate 3-epimerase IPN28_01530 IPR000056 Ribulose-phosphate 3-epimerase-like IPN28_01560 IPR016032 Signal transduction response regulator, C-terminal effector IPN28_01560 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily IPN28_01560 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain IPN28_01560 IPR000792 Transcription regulator LuxR, C-terminal IPN28_01560 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_01565 IPR041166 LapB, rubredoxin metal binding domain IPN28_01565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_01565 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_01565 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IPN28_01565 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01565 IPR004504 DNA repair protein RadA IPN28_01565 IPR014774 KaiC-like domain IPN28_01565 IPR003593 AAA+ ATPase domain IPN28_01590 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IPN28_01590 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPN28_01590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_01590 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IPN28_01590 IPR025709 Leucyl-tRNA synthetase, editing domain IPN28_01590 IPR002302 Leucine-tRNA ligase IPN28_01590 IPR002300 Aminoacyl-tRNA synthetase, class Ia IPN28_01590 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPN28_01595 IPR021959 Protein of unknown function DUF3576 IPN28_01600 IPR033900 Porin domain, Gram-negative type IPN28_01605 IPR001608 Alanine racemase, N-terminal IPN28_01605 IPR011078 Pyridoxal phosphate homeostasis protein IPN28_01605 IPR029066 PLP-binding barrel IPN28_01615 IPR011006 CheY-like superfamily IPN28_01615 IPR001867 OmpR/PhoB-type DNA-binding domain IPN28_01615 IPR001789 Signal transduction response regulator, receiver domain IPN28_01615 IPR039420 Transcriptional regulatory protein WalR-like IPN28_01615 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_01640 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01640 IPR004491 Heat shock protein HslU IPN28_01640 IPR003593 AAA+ ATPase domain IPN28_01640 IPR003959 ATPase, AAA-type, core IPN28_01640 IPR019489 Clp ATPase, C-terminal IPN28_01645 IPR022369 Integral membrane protein TerC, riboswitch-linked IPN28_01645 IPR005496 Integral membrane protein TerC IPN28_01650 IPR001353 Proteasome, subunit alpha/beta IPN28_01650 IPR023333 Proteasome B-type subunit IPN28_01650 IPR029055 Nucleophile aminohydrolases, N-terminal IPN28_01650 IPR022281 ATP-dependent protease, HslV subunit IPN28_01655 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily IPN28_01655 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site IPN28_01655 IPR000807 Imidazoleglycerol-phosphate dehydratase IPN28_01655 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_01665 IPR012131 Histidinol dehydrogenase IPN28_01665 IPR022695 Histidinol dehydrogenase, monofunctional IPN28_01665 IPR001692 Histidinol dehydrogenase, conserved site IPN28_01665 IPR016161 Aldehyde/histidinol dehydrogenase IPN28_01670 IPR010139 Imidazole glycerol phosphate synthase, subunit H IPN28_01670 IPR029062 Class I glutamine amidotransferase-like IPN28_01670 IPR017926 Glutamine amidotransferase IPN28_01675 IPR000182 GNAT domain IPN28_01675 IPR016181 Acyl-CoA N-acyltransferase IPN28_01680 IPR011060 Ribulose-phosphate binding barrel IPN28_01680 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase IPN28_01680 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA IPN28_01680 IPR006062 Histidine biosynthesis IPN28_01680 IPR013785 Aldolase-type TIM barrel IPN28_01685 IPR006062 Histidine biosynthesis IPN28_01685 IPR011060 Ribulose-phosphate binding barrel IPN28_01685 IPR013785 Aldolase-type TIM barrel IPN28_01685 IPR004651 Histidine biosynthesis, HisF IPN28_01690 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like IPN28_01690 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase IPN28_01705 IPR003115 ParB/Sulfiredoxin IPN28_01705 IPR036086 ParB/Sulfiredoxin superfamily IPN28_01705 IPR041468 ParB/Spo0J, HTH domain IPN28_01705 IPR004437 ParB/RepB/Spo0J partition protein IPN28_01710 IPR025669 AAA domain IPN28_01710 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_01715 IPR003682 rRNA small subunit methyltransferase G IPN28_01720 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_01720 IPR026904 GidA associated domain 3 IPN28_01720 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG IPN28_01720 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related IPN28_01720 IPR020595 MnmG-related, conserved site IPN28_01725 IPR031168 TrmE-type guanine nucleotide-binding domain IPN28_01725 IPR018948 GTP-binding protein TrmE, N-terminal IPN28_01725 IPR005225 Small GTP-binding protein domain IPN28_01725 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01725 IPR025867 MnmE, helical domain IPN28_01725 IPR027368 tRNA modification GTPase MnmE domain 2 IPN28_01725 IPR004520 tRNA modification GTPase MnmE IPN28_01725 IPR006073 GTP binding domain IPN28_01725 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 IPN28_01765 IPR012340 Nucleic acid-binding, OB-fold IPN28_01765 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPN28_01765 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01765 IPR003593 AAA+ ATPase domain IPN28_01765 IPR004665 Transcription termination factor Rho IPN28_01765 IPR011129 Cold shock domain IPN28_01765 IPR036269 Rho termination factor, N-terminal domain superfamily IPN28_01765 IPR011112 Rho termination factor, N-terminal IPN28_01765 IPR041703 Transcription termination factor Rho, ATP binding domain IPN28_01765 IPR011113 Rho termination factor, RNA-binding domain IPN28_01770 IPR005265 Protoporphyrinogen oxidase HemJ-like IPN28_01785 IPR001015 Ferrochelatase IPN28_01785 IPR033659 Ferrochelatase, N-terminal IPN28_01785 IPR033644 Ferrochelatase, C-terminal IPN28_01785 IPR019772 Ferrochelatase, active site IPN28_01790 IPR000257 Uroporphyrinogen decarboxylase (URO-D) IPN28_01790 IPR038071 UROD/MetE-like superfamily IPN28_01790 IPR006361 Uroporphyrinogen decarboxylase HemE IPN28_01810 IPR036397 Ribonuclease H superfamily IPN28_01810 IPR012337 Ribonuclease H-like superfamily IPN28_01810 IPR013520 Exonuclease, RNase T/DNA polymerase III IPN28_01810 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IPN28_01810 IPR006309 DNA polymerase 3, epsilon subunit IPN28_01815 IPR017926 Glutamine amidotransferase IPN28_01815 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain IPN28_01815 IPR029062 Class I glutamine amidotransferase-like IPN28_01815 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily IPN28_01815 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain IPN28_01815 IPR006274 Carbamoyl-phosphate synthase, small subunit IPN28_01820 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01820 IPR001977 Dephospho-CoA kinase IPN28_01825 IPR036291 NAD(P)-binding domain superfamily IPN28_01825 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase IPN28_01825 IPR022893 Shikimate dehydrogenase family IPN28_01825 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal IPN28_01825 IPR011342 Shikimate dehydrogenase IPN28_01825 IPR041121 SDH, C-terminal IPN28_01830 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein IPN28_01830 IPR029001 Inosine triphosphate pyrophosphatase-like IPN28_01835 IPR005177 Bifunctional kinase-pyrophosphorylase IPN28_01835 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein IPN28_01840 IPR003708 Bacterial protein export chaperone SecB IPN28_01840 IPR035958 SecB-like superfamily IPN28_01845 IPR007313 FxsA cytoplasmic membrane protein IPN28_01855 IPR005300 Lytic transglycosylase MltA, domain B IPN28_01855 IPR034654 MltA, 3D domain IPN28_01855 IPR026044 Membrane-bound lytic murein transglycosylase A IPN28_01855 IPR010611 3D domain IPN28_01855 IPR036908 RlpA-like domain superfamily IPN28_01885 IPR023210 NADP-dependent oxidoreductase domain IPN28_01885 IPR020471 Aldo/keto reductase IPN28_01885 IPR036812 NADP-dependent oxidoreductase domain superfamily IPN28_01975 IPR001482 Type II/IV secretion system protein IPN28_01975 IPR006321 Pilus retraction protein PilT IPN28_01975 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_01975 IPR003593 AAA+ ATPase domain IPN28_02005 IPR019494 FIST, C-domain IPN28_02005 IPR016741 Uncharacterised conserved protein UCP018953 IPN28_02005 IPR013702 FIST domain, N-terminal IPN28_02010 IPR023353 LemA-like domain superfamily IPN28_02010 IPR007156 LemA IPN28_02015 IPR022919 Peptidase M48, protease HtpX, putative IPN28_02015 IPR001915 Peptidase M48 IPN28_02020 IPR004033 UbiE/COQ5 methyltransferase IPN28_02020 IPR023576 UbiE/COQ5 methyltransferase, conserved site IPN28_02020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_02025 IPR006214 Bax inhibitor 1-related IPN28_02030 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L IPN28_02030 IPR001185 Large-conductance mechanosensitive channel IPN28_02030 IPR036019 Gated mechanosensitive channel IPN28_02030 IPR019823 Large-conductance mechanosensitive channel, conserved site IPN28_02040 IPR013762 Integrase-like, catalytic domain superfamily IPN28_02040 IPR002104 Integrase, catalytic domain IPN28_02040 IPR038488 Integrase, DNA-binding domain superfamily IPN28_02040 IPR025166 Integrase, DNA-binding domain IPN28_02040 IPR010998 Integrase/recombinase, N-terminal IPN28_02040 IPR011010 DNA breaking-rejoining enzyme, catalytic core IPN28_02050 IPR010093 SinI-like, DNA-binding domain IPN28_02050 IPR041657 Helix-turn-helix domain, group 17 IPN28_02055 IPR041459 Polyvalent protein, metallopeptidase domain IPN28_02055 IPR013610 Domain of unknown function DUF1738 IPN28_02055 IPR006171 TOPRIM domain IPN28_02055 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain IPN28_02060 IPR003593 AAA+ ATPase domain IPN28_02060 IPR041166 LapB, rubredoxin metal binding domain IPN28_02060 IPR004504 DNA repair protein RadA IPN28_02060 IPR014774 KaiC-like domain IPN28_02060 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_02060 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IPN28_02060 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_02060 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_02120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_02130 IPR014001 Helicase superfamily 1/2, ATP-binding domain IPN28_02130 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_02135 IPR018306 Bacteriophage T5, Orf172 DNA-binding IPN28_02175 IPR023404 Radical SAM, alpha/beta horseshoe IPN28_02175 IPR002792 TRAM domain IPN28_02175 IPR006638 Elp3/MiaB/NifB IPN28_02175 IPR005839 Methylthiotransferase IPN28_02175 IPR020612 Methylthiotransferase, conserved site IPN28_02175 IPR013848 Methylthiotransferase, N-terminal IPN28_02175 IPR038135 Methylthiotransferase, N-terminal domain superfamily IPN28_02175 IPR005840 Ribosomal protein S12 methylthiotransferase RimO IPN28_02175 IPR041582 RimO, TRAM domain IPN28_02175 IPR007197 Radical SAM IPN28_02190 IPR003824 Undecaprenyl-diphosphatase UppP IPN28_02210 IPR020846 Major facilitator superfamily domain IPN28_02210 IPR011701 Major facilitator superfamily IPN28_02210 IPR004812 Drug resistance transporter Bcr/CmlA subfamily IPN28_02210 IPR036259 MFS transporter superfamily IPN28_02225 IPR009874 Protein of unknown function DUF1428 IPN28_02225 IPR011008 Dimeric alpha-beta barrel IPN28_02235 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_02235 IPR011991 ArsR-like helix-turn-helix domain IPN28_02235 IPR001845 HTH ArsR-type DNA-binding domain IPN28_02235 IPR036390 Winged helix DNA-binding domain superfamily IPN28_02240 IPR003774 Protein of unknown function UPF0301 IPN28_02245 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IPN28_02245 IPR011765 Peptidase M16, N-terminal IPN28_02245 IPR001431 Peptidase M16, zinc-binding site IPN28_02245 IPR007863 Peptidase M16, C-terminal IPN28_02255 IPR001926 Pyridoxal-phosphate dependent enzyme IPN28_02255 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site IPN28_02255 IPR029144 Threonine synthase, N-terminal IPN28_02255 IPR037158 Threonine synthase, N-terminal domain superfamily IPN28_02255 IPR004450 Threonine synthase-like IPN28_02255 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPN28_02270 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO IPN28_02270 IPR021196 PdxT/SNO family, conserved site IPN28_02270 IPR029062 Class I glutamine amidotransferase-like IPN28_02295 IPR013785 Aldolase-type TIM barrel IPN28_02295 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ IPN28_02295 IPR033755 PdxS/SNZ N-terminal domain IPN28_02295 IPR011060 Ribulose-phosphate binding barrel IPN28_02325 IPR018775 RNA repair pathway DNA polymerase beta IPN28_02345 IPR029062 Class I glutamine amidotransferase-like IPN28_02345 IPR017926 Glutamine amidotransferase IPN28_02345 IPR001674 GMP synthase, C-terminal IPN28_02345 IPR004739 GMP synthase, glutamine amidotransferase IPN28_02345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_02345 IPR022310 NAD/GMP synthase IPN28_02345 IPR025777 GMP synthetase ATP pyrophosphatase domain IPN28_02345 IPR022955 GMP synthase IPN28_02360 IPR004620 5,10-methylenetetrahydrofolate reductase IPN28_02360 IPR003171 Methylenetetrahydrofolate reductase IPN28_02360 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase IPN28_02360 IPR029041 FAD-linked oxidoreductase-like IPN28_02370 IPR038071 UROD/MetE-like superfamily IPN28_02370 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal IPN28_02370 IPR006276 Cobalamin-independent methionine synthase IPN28_02370 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal IPN28_02380 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae IPN28_02380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_02380 IPR006027 NusB/RsmB/TIM44 IPN28_02380 IPR035926 NusB-like superfamily IPN28_02380 IPR023267 RNA (C5-cytosine) methyltransferase IPN28_02380 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type IPN28_02380 IPR004573 rRNA small subunit methyltransferase B IPN28_02380 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site IPN28_02415 IPR001093 IMP dehydrogenase/GMP reductase IPN28_02415 IPR015875 IMP dehydrogenase / GMP reductase, conserved site IPN28_02415 IPR005990 Inosine-5'-monophosphate dehydrogenase IPN28_02415 IPR000644 CBS domain IPN28_02415 IPR013785 Aldolase-type TIM barrel IPN28_02425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_02425 IPR002877 Ribosomal RNA methyltransferase FtsJ domain IPN28_02425 IPR015507 Ribosomal RNA large subunit methyltransferase E IPN28_02450 IPR018509 Dehydroquinase, class II, conserved site IPN28_02450 IPR036441 Dehydroquinase, class II superfamily IPN28_02450 IPR001874 Dehydroquinase, class II IPN28_02455 IPR001249 Acetyl-CoA biotin carboxyl carrier IPN28_02455 IPR000089 Biotin/lipoyl attachment IPN28_02455 IPR011053 Single hybrid motif IPN28_02455 IPR001882 Biotin-binding site IPN28_02460 IPR011054 Rudiment single hybrid motif IPN28_02460 IPR016185 Pre-ATP-grasp domain superfamily IPN28_02460 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IPN28_02460 IPR013815 ATP-grasp fold, subdomain 1 IPN28_02460 IPR005482 Biotin carboxylase, C-terminal IPN28_02460 IPR011764 Biotin carboxylation domain IPN28_02460 IPR011761 ATP-grasp fold IPN28_02460 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase IPN28_02460 IPR005481 Biotin carboxylase-like, N-terminal domain IPN28_02465 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal IPN28_02465 IPR016181 Acyl-CoA N-acyltransferase IPN28_02465 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase IPN28_02515 IPR004176 Clp, N-terminal IPN28_02515 IPR036628 Clp, N-terminal domain superfamily IPN28_02515 IPR019489 Clp ATPase, C-terminal IPN28_02515 IPR041546 ClpA/ClpB, AAA lid domain IPN28_02515 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA IPN28_02515 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_02515 IPR028299 ClpA/B, conserved site 2 IPN28_02515 IPR018368 ClpA/B, conserved site 1 IPN28_02515 IPR003593 AAA+ ATPase domain IPN28_02515 IPR003959 ATPase, AAA-type, core IPN28_02515 IPR001270 ClpA/B family IPN28_02520 IPR037163 Spermidine synthase, tetramerisation domain superfamily IPN28_02520 IPR035246 Spermidine synthase, tetramerisation domain IPN28_02520 IPR001045 Spermidine/spermine synthases IPN28_02520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_02520 IPR030373 Polyamine biosynthesis domain, conserved site IPN28_02520 IPR030374 Polyamine biosynthesis domain IPN28_02530 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IPN28_02530 IPR003769 Adaptor protein ClpS, core IPN28_02530 IPR022935 ATP-dependent Clp protease adaptor protein ClpS IPN28_02595 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 IPN28_02595 IPR002938 FAD-binding domain IPN28_02595 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_02595 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site IPN28_02600 IPR000271 Ribosomal protein L34 IPN28_02600 IPR020939 Ribosomal protein L34, conserved site IPN28_02605 IPR000100 Ribonuclease P IPN28_02605 IPR020539 Ribonuclease P, conserved site IPN28_02605 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_02605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_02610 IPR002696 Putative membrane protein insertion efficiency factor IPN28_02615 IPR028053 Membrane insertase YidC, N-terminal IPN28_02615 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 IPN28_02615 IPR038210 Membrane insertase YidC, periplasmic domain IPN28_02615 IPR038221 YidC, periplasmic domain superfamily IPN28_02615 IPR028055 Membrane insertase YidC/Oxa1, C-terminal IPN28_02615 IPR019998 Membrane insertase YidC IPN28_02620 IPR006073 GTP binding domain IPN28_02620 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC IPN28_02620 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_02620 IPR030393 EngB-type guanine nucleotide-binding (G) domain IPN28_02625 IPR003798 DNA recombination RmuC IPN28_02630 IPR036821 Peptide deformylase superfamily IPN28_02630 IPR023635 Peptide deformylase IPN28_02635 IPR005793 Formyl transferase, C-terminal IPN28_02635 IPR011034 Formyl transferase-like, C-terminal domain superfamily IPN28_02635 IPR036477 Formyl transferase, N-terminal domain superfamily IPN28_02635 IPR002376 Formyl transferase, N-terminal IPN28_02635 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain IPN28_02635 IPR005794 Methionyl-tRNA formyltransferase IPN28_02635 IPR001555 Phosphoribosylglycinamide formyltransferase, active site IPN28_02635 IPR037022 Formyl transferase, C-terminal domain superfamily IPN28_02640 IPR020103 Pseudouridine synthase, catalytic domain superfamily IPN28_02640 IPR001406 Pseudouridine synthase I, TruA IPN28_02640 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain IPN28_02640 IPR020095 Pseudouridine synthase I, TruA, C-terminal IPN28_02655 IPR011650 Peptidase M20, dimerisation domain IPN28_02655 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site IPN28_02655 IPR036264 Bacterial exopeptidase dimerisation domain IPN28_02655 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria IPN28_02655 IPR002933 Peptidase M20 IPN28_02665 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 IPN28_02665 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily IPN28_02665 IPR011004 Trimeric LpxA-like superfamily IPN28_02665 IPR001451 Hexapeptide repeat IPN28_02665 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family IPN28_02680 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_02680 IPR025877 MobA-like NTP transferase IPN28_02680 IPR001451 Hexapeptide repeat IPN28_02680 IPR011004 Trimeric LpxA-like superfamily IPN28_02680 IPR038009 GlmU, C-terminal LbH domain IPN28_02680 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase IPN28_02695 IPR017932 Glutamine amidotransferase type 2 domain IPN28_02695 IPR035466 GlmS/AgaS, SIS domain 1 IPN28_02695 IPR035490 GlmS/FrlB, SIS domain 2 IPN28_02695 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising IPN28_02695 IPR029055 Nucleophile aminohydrolases, N-terminal IPN28_02695 IPR001347 Sugar isomerase (SIS) IPN28_02700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_02700 IPR001525 C-5 cytosine methyltransferase IPN28_02700 IPR018117 DNA methylase, C-5 cytosine-specific, active site IPN28_02720 IPR004498 Ribosomal protein L11 methyltransferase IPN28_02720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_02730 IPR020615 Thiolase, acyl-enzyme intermediate active site IPN28_02730 IPR016039 Thiolase-like IPN28_02730 IPR002155 Thiolase IPN28_02730 IPR020617 Thiolase, C-terminal IPN28_02730 IPR020616 Thiolase, N-terminal IPN28_02730 IPR020613 Thiolase, conserved site IPN28_02730 IPR020610 Thiolase, active site IPN28_02750 IPR036291 NAD(P)-binding domain superfamily IPN28_02750 IPR001753 Enoyl-CoA hydratase/isomerase IPN28_02750 IPR029045 ClpP/crotonase-like domain superfamily IPN28_02750 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPN28_02750 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPN28_02750 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IPN28_02750 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IPN28_02785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IPN28_02785 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IPN28_02785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPN28_02785 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain IPN28_02785 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPN28_02785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPN28_02785 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IPN28_02795 IPR041627 CbbX, AAA lid domain IPN28_02795 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_02795 IPR000641 CbxX/CfxQ IPN28_02795 IPR000470 CbxX/CfxQ, monofunctional IPN28_02795 IPR003959 ATPase, AAA-type, core IPN28_02795 IPR003593 AAA+ ATPase domain IPN28_02820 IPR003782 Copper chaperone SCO1/SenC IPN28_02820 IPR036249 Thioredoxin-like superfamily IPN28_02825 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B IPN28_02825 IPR038521 ThiC/Bza superfamily IPN28_02825 IPR037509 Phosphomethylpyrimidine synthase IPN28_02825 IPR025747 ThiC-associated domain IPN28_02830 IPR013987 PhnA protein, N-terminal IPN28_02830 IPR013988 PhnA protein, C-terminal IPN28_02830 IPR004624 PhnA protein IPN28_02880 IPR013766 Thioredoxin domain IPN28_02880 IPR036249 Thioredoxin-like superfamily IPN28_02880 IPR013740 Redoxin IPN28_02880 IPR037944 Peroxiredoxin-5-like IPN28_02910 IPR022664 Dihydrodipicolinate reductase, conserved site IPN28_02910 IPR036291 NAD(P)-binding domain superfamily IPN28_02910 IPR022663 Dihydrodipicolinate reductase, C-terminal IPN28_02910 IPR000846 Dihydrodipicolinate reductase, N-terminal IPN28_02910 IPR023940 Dihydrodipicolinate reductase IPN28_02925 IPR003714 PhoH-like protein IPN28_02925 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_02935 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site IPN28_02935 IPR001926 Pyridoxal-phosphate dependent enzyme IPN28_02935 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPN28_02935 IPR005789 Threonine dehydratase, catabolic IPN28_02935 IPR002912 ACT domain IPN28_02945 IPR029020 Ammonium/urea transporter IPN28_02945 IPR018047 Ammonium transporter, conserved site IPN28_02945 IPR024041 Ammonium transporter AmtB-like domain IPN28_02945 IPR001905 Ammonium transporter IPN28_02950 IPR026494 Ribonucleoside reductase subunit beta, NrdF IPN28_02950 IPR009078 Ferritin-like superfamily IPN28_02950 IPR012348 Ribonucleotide reductase-like IPN28_02950 IPR000358 Ribonucleotide reductase small subunit family IPN28_02950 IPR030475 Ribonucleotide reductase small subunit, acitve site IPN28_02950 IPR033909 Ribonucleotide reductase small subunit IPN28_02965 IPR028427 Peptide methionine sulfoxide reductase IPN28_02965 IPR011057 Mss4-like superfamily IPN28_02965 IPR002579 Peptide methionine sulphoxide reductase MrsB IPN28_02970 IPR005144 ATP-cone domain IPN28_02970 IPR013346 Ribonucleotide reductase, class I , alpha subunit IPN28_02970 IPR000788 Ribonucleotide reductase large subunit, C-terminal IPN28_02970 IPR013509 Ribonucleotide reductase large subunit, N-terminal IPN28_02970 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal IPN28_02970 IPR039718 Ribonucleoside-diphosphate reductase large subunit IPN28_02975 IPR040442 Pyruvate kinase-like domain superfamily IPN28_02975 IPR015793 Pyruvate kinase, barrel IPN28_02975 IPR018209 Pyruvate kinase, active site IPN28_02975 IPR011037 Pyruvate kinase-like, insert domain superfamily IPN28_02975 IPR001697 Pyruvate kinase IPN28_02975 IPR015806 Pyruvate kinase, insert domain superfamily IPN28_02975 IPR015795 Pyruvate kinase, C-terminal IPN28_02975 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IPN28_02975 IPR036918 Pyruvate kinase, C-terminal domain superfamily IPN28_02995 IPR041492 Haloacid dehalogenase-like hydrolase IPN28_02995 IPR023214 HAD superfamily IPN28_02995 IPR023198 Phosphoglycolate phosphatase-like, domain 2 IPN28_02995 IPR006439 HAD hydrolase, subfamily IA IPN28_02995 IPR036412 HAD-like superfamily IPN28_03005 IPR038476 UvrC homology region 2 superfamily IPN28_03005 IPR036876 UVR domain superfamily IPN28_03005 IPR001943 UVR domain IPN28_03005 IPR001162 UvrC family homology region IPN28_03005 IPR004791 UvrABC system, subunit C IPN28_03005 IPR010994 RuvA domain 2-like IPN28_03005 IPR000305 GIY-YIG endonuclease IPN28_03005 IPR035901 GIY-YIG endonuclease superfamily IPN28_03010 IPR002347 Short-chain dehydrogenase/reductase SDR IPN28_03010 IPR020904 Short-chain dehydrogenase/reductase, conserved site IPN28_03010 IPR036291 NAD(P)-binding domain superfamily IPN28_03010 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase IPN28_03020 IPR001227 Acyl transferase domain superfamily IPN28_03020 IPR014043 Acyl transferase IPN28_03020 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IPN28_03020 IPR024925 Malonyl CoA-acyl carrier protein transacylase IPN28_03020 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding IPN28_03020 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type IPN28_03030 IPR000529 Ribosomal protein S6 IPN28_03030 IPR020814 Ribosomal protein S6, plastid/chloroplast IPN28_03030 IPR035980 Ribosomal protein S6 superfamily IPN28_03030 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 IPN28_03035 IPR036870 Ribosomal protein S18 superfamily IPN28_03035 IPR018275 Ribosomal protein S18, conserved site IPN28_03035 IPR001648 Ribosomal protein S18 IPN28_03040 IPR009027 Ribosomal protein L9/RNase H1, N-terminal IPN28_03040 IPR020594 Ribosomal protein L9, bacteria/chloroplast IPN28_03040 IPR020069 Ribosomal protein L9, C-terminal IPN28_03040 IPR036791 Ribosomal protein L9, C-terminal domain superfamily IPN28_03040 IPR020070 Ribosomal protein L9, N-terminal IPN28_03040 IPR036935 Ribosomal protein L9, N-terminal domain superfamily IPN28_03040 IPR000244 Ribosomal protein L9 IPN28_03045 IPR007693 DNA helicase, DnaB-like, N-terminal IPN28_03045 IPR007694 DNA helicase, DnaB-like, C-terminal IPN28_03045 IPR007692 DNA helicase, DnaB type IPN28_03045 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_03045 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IPN28_03045 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily IPN28_03050 IPR029066 PLP-binding barrel IPN28_03050 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site IPN28_03050 IPR001608 Alanine racemase, N-terminal IPN28_03050 IPR011079 Alanine racemase, C-terminal IPN28_03050 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPN28_03050 IPR000821 Alanine racemase IPN28_03065 IPR030802 ABC transporter permease MalE IPN28_03065 IPR003453 ABC transport permease subunit MlaE, Proteobacteria IPN28_03070 IPR003593 AAA+ ATPase domain IPN28_03070 IPR003439 ABC transporter-like IPN28_03070 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_03070 IPR017871 ABC transporter, conserved site IPN28_03070 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl IPN28_03075 IPR012338 Beta-lactamase/transpeptidase-like IPN28_03075 IPR001264 Glycosyl transferase, family 51 IPN28_03075 IPR023346 Lysozyme-like domain superfamily IPN28_03075 IPR036950 Penicillin binding protein transglycosylase domain IPN28_03075 IPR031376 Penicillin-binding protein, OB-like domain IPN28_03075 IPR001460 Penicillin-binding protein, transpeptidase IPN28_03090 IPR023714 Zinc transport protein ZntB IPN28_03090 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB IPN28_03095 IPR023408 Mechanosensitive ion channel MscS domain superfamily IPN28_03095 IPR006686 Mechanosensitive ion channel MscS, conserved site IPN28_03095 IPR011066 Mechanosensitive ion channel MscS, C-terminal IPN28_03095 IPR006685 Mechanosensitive ion channel MscS IPN28_03095 IPR010920 LSM domain superfamily IPN28_03095 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 IPN28_03095 IPR024393 Mechanosensitive ion channel MscS, porin domain IPN28_03095 IPR025692 Mechanosensitive ion channel inner membrane domain 1 IPN28_03115 IPR029760 Glutathione peroxidase conserved site IPN28_03115 IPR000889 Glutathione peroxidase IPN28_03115 IPR029759 Glutathione peroxidase active site IPN28_03115 IPR036249 Thioredoxin-like superfamily IPN28_03135 IPR021124 CRISPR-associated protein, Cas5 IPN28_03135 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d IPN28_03135 IPR013422 CRISPR-associated protein Cas5, N-terminal IPN28_03155 IPR019856 CRISPR-associated protein Cas1, DVULG subtype IPN28_03155 IPR002729 CRISPR-associated protein Cas1 IPN28_03155 IPR042206 CRISPR-associated endonuclease Cas1, C-terminal domain IPN28_03155 IPR042211 CRISPR-associated endonuclease Cas1, N-terminal domain IPN28_03160 IPR021127 CRISPR-associated endonuclease Cas2 IPN28_03160 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 IPN28_03185 IPR025166 Integrase, DNA-binding domain IPN28_03185 IPR038488 Integrase, DNA-binding domain superfamily IPN28_03185 IPR002104 Integrase, catalytic domain IPN28_03185 IPR013762 Integrase-like, catalytic domain superfamily IPN28_03185 IPR011010 DNA breaking-rejoining enzyme, catalytic core IPN28_03185 IPR010998 Integrase/recombinase, N-terminal IPN28_03195 IPR023606 CoA-transferase family III domain superfamily IPN28_03195 IPR003673 CoA-transferase family III IPN28_03215 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain IPN28_03215 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily IPN28_03220 IPR005746 Thioredoxin IPN28_03220 IPR013766 Thioredoxin domain IPN28_03220 IPR017937 Thioredoxin, conserved site IPN28_03220 IPR036249 Thioredoxin-like superfamily IPN28_03225 IPR005651 Trm112-like IPN28_03245 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site IPN28_03245 IPR013785 Aldolase-type TIM barrel IPN28_03245 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily IPN28_03245 IPR005671 2-isopropylmalate synthase, bacterial-type IPN28_03245 IPR000891 Pyruvate carboxyltransferase IPN28_03245 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain IPN28_03280 IPR001765 Carbonic anhydrase IPN28_03280 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site IPN28_03280 IPR036874 Carbonic anhydrase superfamily IPN28_03285 IPR000477 Reverse transcriptase domain IPN28_03285 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA IPN28_03295 IPR005122 Uracil-DNA glycosylase-like IPN28_03295 IPR036895 Uracil-DNA glycosylase-like domain superfamily IPN28_03305 IPR036161 RPB6/omega subunit-like superfamily IPN28_03305 IPR003716 DNA-directed RNA polymerase, omega subunit IPN28_03305 IPR006110 RNA polymerase, subunit omega/K/RPB6 IPN28_03305 IPR012293 RNA polymerase subunit, RPB6/omega IPN28_03310 IPR033655 RelA, TGS domain IPN28_03310 IPR012676 TGS-like IPN28_03310 IPR004095 TGS IPN28_03310 IPR002912 ACT domain IPN28_03310 IPR012675 Beta-grasp domain superfamily IPN28_03310 IPR003607 HD/PDEase domain IPN28_03310 IPR004811 RelA/SpoT family IPN28_03310 IPR007685 RelA/SpoT IPN28_03315 IPR000836 Phosphoribosyltransferase domain IPN28_03315 IPR005764 Adenine phosphoribosyl transferase IPN28_03315 IPR029057 Phosphoribosyltransferase-like IPN28_03320 IPR002582 Holo-[acyl carrier protein] synthase IPN28_03320 IPR037143 4'-phosphopantetheinyl transferase domain superfamily IPN28_03320 IPR008278 4'-phosphopantetheinyl transferase domain IPN28_03320 IPR004568 Phosphopantetheine-protein transferase domain IPN28_03325 IPR000223 Peptidase S26A, signal peptidase I IPN28_03325 IPR019533 Peptidase S26 IPN28_03325 IPR019758 Peptidase S26A, signal peptidase I, conserved site IPN28_03325 IPR019757 Peptidase S26A, signal peptidase I, lysine active site IPN28_03325 IPR036286 LexA/Signal peptidase-like superfamily IPN28_03330 IPR036389 Ribonuclease III, endonuclease domain superfamily IPN28_03330 IPR014720 Double-stranded RNA-binding domain IPN28_03330 IPR011907 Ribonuclease III IPN28_03330 IPR000999 Ribonuclease III domain IPN28_03335 IPR030388 Era-type guanine nucleotide-binding (G) domain IPN28_03335 IPR005662 GTP-binding protein Era IPN28_03335 IPR006073 GTP binding domain IPN28_03335 IPR015946 K homology domain-like, alpha/beta IPN28_03335 IPR004044 K Homology domain, type 2 IPN28_03335 IPR009019 K homology domain superfamily, prokaryotic type IPN28_03335 IPR005225 Small GTP-binding protein domain IPN28_03335 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_03360 IPR028188 Type IV pilin PilA IPN28_03360 IPR012902 Prokaryotic N-terminal methylation site IPN28_03365 IPR019844 Cold-shock (CSD) domain IPN28_03365 IPR002059 Cold-shock protein, DNA-binding IPN28_03365 IPR011129 Cold shock domain IPN28_03365 IPR012156 Cold shock, CspA IPN28_03365 IPR012340 Nucleic acid-binding, OB-fold IPN28_03370 IPR042099 AMP-dependent synthetase-like superfamily IPN28_03370 IPR025110 AMP-binding enzyme, C-terminal domain IPN28_03370 IPR020845 AMP-binding, conserved site IPN28_03370 IPR000873 AMP-dependent synthetase/ligase IPN28_03390 IPR002547 tRNA-binding domain IPN28_03390 IPR012340 Nucleic acid-binding, OB-fold IPN28_03390 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit IPN28_03390 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 IPN28_03390 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain IPN28_03390 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain IPN28_03390 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily IPN28_03390 IPR005121 Ferrodoxin-fold anticodon-binding domain IPN28_03390 IPR009061 Putative DNA-binding domain superfamily IPN28_03390 IPR005147 tRNA synthetase, B5-domain IPN28_03390 IPR005146 B3/B4 tRNA-binding domain IPN28_03400 IPR000182 GNAT domain IPN28_03400 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB IPN28_03400 IPR000905 Gcp-like domain IPN28_03400 IPR006464 N-acetyltransferase RimI/Ard1 IPN28_03400 IPR016181 Acyl-CoA N-acyltransferase IPN28_03405 IPR002319 Phenylalanyl-tRNA synthetase IPN28_03405 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial IPN28_03405 IPR006195 Aminoacyl-tRNA synthetase, class II IPN28_03405 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IPN28_03405 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit IPN28_03405 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal IPN28_03430 IPR005813 Ribosomal protein L20 IPN28_03430 IPR035566 Ribosomal protein L20, C-terminal IPN28_03435 IPR021137 Ribosomal protein L35 IPN28_03435 IPR037229 Ribosomal protein L35 superfamily IPN28_03435 IPR018265 Ribosomal protein L35, conserved site IPN28_03435 IPR001706 Ribosomal protein L35, non-mitochondrial IPN28_03445 IPR008918 Helix-hairpin-helix motif, class 2 IPN28_03445 IPR012337 Ribonuclease H-like superfamily IPN28_03445 IPR029060 PIN-like domain superfamily IPN28_03445 IPR013520 Exonuclease, RNase T/DNA polymerase III IPN28_03445 IPR002298 DNA polymerase A IPN28_03445 IPR018320 DNA polymerase 1 IPN28_03445 IPR020045 DNA polymerase I-like, H3TH domain IPN28_03445 IPR002562 3'-5' exonuclease domain IPN28_03445 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal IPN28_03445 IPR002421 5'-3' exonuclease, N-terminal IPN28_03445 IPR036279 5'-3' exonuclease, C-terminal domain superfamily IPN28_03445 IPR019760 DNA-directed DNA polymerase, family A, conserved site IPN28_03445 IPR001098 DNA-directed DNA polymerase, family A, palm domain IPN28_03445 IPR036397 Ribonuclease H superfamily IPN28_03450 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like IPN28_03450 IPR023166 HI0933-like insert domain superfamily IPN28_03450 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_03455 IPR036986 RNA-binding S4 domain superfamily IPN28_03455 IPR006145 Pseudouridine synthase, RsuA/RluA IPN28_03455 IPR020103 Pseudouridine synthase, catalytic domain superfamily IPN28_03455 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F IPN28_03455 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain IPN28_03455 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site IPN28_03455 IPR002942 RNA-binding S4 domain IPN28_03465 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB IPN28_03465 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPN28_03465 IPR004441 RNA methyltransferase TrmH family IPN28_03465 IPR029064 50S ribosomal protein L30e-like IPN28_03465 IPR001537 tRNA/rRNA methyltransferase, SpoU type IPN28_03465 IPR013123 RNA 2-O ribose methyltransferase, substrate binding IPN28_03465 IPR029028 Alpha/beta knot methyltransferases IPN28_03500 IPR017508 HipA, N-terminal subdomain 1 IPN28_03500 IPR012893 HipA-like, C-terminal IPN28_03505 IPR023214 HAD superfamily IPN28_03505 IPR027256 P-type ATPase, subfamily IB IPN28_03505 IPR001757 P-type ATPase IPN28_03505 IPR018303 P-type ATPase, phosphorylation site IPN28_03505 IPR008250 P-type ATPase, A domain superfamily IPN28_03505 IPR023299 P-type ATPase, cytoplasmic domain N IPN28_03505 IPR023298 P-type ATPase, transmembrane domain superfamily IPN28_03505 IPR036412 HAD-like superfamily IPN28_03525 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA IPN28_03525 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IPN28_03525 IPR001036 Acriflavin resistance protein IPN28_03555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_03555 IPR030374 Polyamine biosynthesis domain IPN28_03555 IPR036259 MFS transporter superfamily IPN28_03555 IPR001045 Spermidine/spermine synthases IPN28_03565 IPR013149 Alcohol dehydrogenase, C-terminal IPN28_03565 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site IPN28_03565 IPR036291 NAD(P)-binding domain superfamily IPN28_03565 IPR020843 Polyketide synthase, enoylreductase domain IPN28_03565 IPR013154 Alcohol dehydrogenase, N-terminal IPN28_03565 IPR011032 GroES-like superfamily IPN28_03570 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme IPN28_03570 IPR002934 Polymerase, nucleotidyl transferase domain IPN28_03570 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase IPN28_03570 IPR002912 ACT domain IPN28_03570 IPR003607 HD/PDEase domain IPN28_03570 IPR006674 HD domain IPN28_03580 IPR002524 Cation efflux protein IPN28_03580 IPR027470 Cation efflux protein, cytoplasmic domain IPN28_03580 IPR036837 Cation efflux protein, cytoplasmic domain superfamily IPN28_03580 IPR023783 Cation efflux pump FieF IPN28_03580 IPR027469 Cation efflux transmembrane domain superfamily IPN28_03590 IPR011611 Carbohydrate kinase PfkB IPN28_03590 IPR011914 RfaE bifunctional protein, domain II IPN28_03590 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IPN28_03590 IPR004821 Cytidyltransferase-like domain IPN28_03590 IPR023030 Bifunctional protein HldE IPN28_03590 IPR011913 RfaE bifunctional protein, domain I IPN28_03590 IPR029056 Ribokinase-like IPN28_03590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_03615 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IPN28_03615 IPR012338 Beta-lactamase/transpeptidase-like IPN28_03615 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily IPN28_03615 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IPN28_03615 IPR015956 Penicillin-binding protein, C-terminal domain superfamily IPN28_03615 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IPN28_03630 IPR017714 Methylthioribulose-1-phosphate dehydratase IPN28_03630 IPR036409 Class II aldolase/adducin N-terminal domain superfamily IPN28_03630 IPR001303 Class II aldolase/adducin N-terminal IPN28_03635 IPR011051 RmlC-like cupin domain superfamily IPN28_03635 IPR023956 Acireductone dioxygenase ARD, bacteria IPN28_03635 IPR004313 Acireductone dioxygenase ARD family IPN28_03635 IPR014710 RmlC-like jelly roll fold IPN28_03640 IPR006439 HAD hydrolase, subfamily IA IPN28_03640 IPR023943 Enolase-phosphatase E1 IPN28_03640 IPR041492 Haloacid dehalogenase-like hydrolase IPN28_03640 IPR023214 HAD superfamily IPN28_03640 IPR036412 HAD-like superfamily IPN28_03645 IPR000649 Initiation factor 2B-related IPN28_03645 IPR011559 Initiation factor 2B alpha/beta/delta IPN28_03645 IPR037171 NagB/RpiA transferase-like IPN28_03645 IPR005251 Methylthioribose-1-phosphate isomerase IPN28_03695 IPR002941 DNA methylase N-4/N-6 IPN28_03695 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPN28_03695 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class IPN28_03695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_03695 IPR001091 Restriction/modification DNA-methylase IPN28_03715 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_03715 IPR013482 Molybdenum cofactor guanylyltransferase IPN28_03715 IPR025877 MobA-like NTP transferase IPN28_03720 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily IPN28_03720 IPR003448 Molybdopterin biosynthesis MoaE IPN28_03730 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain IPN28_03730 IPR036425 MoaB/Mog-like domain superfamily IPN28_03730 IPR001453 MoaB/Mog domain IPN28_03730 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily IPN28_03730 IPR023045 Molybdenum cofactor biosynthesis C IPN28_03730 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA IPN28_03730 IPR008284 Molybdenum cofactor biosynthesis, conserved site IPN28_03735 IPR013483 Molybdenum cofactor biosynthesis protein A IPN28_03735 IPR006638 Elp3/MiaB/NifB IPN28_03735 IPR013785 Aldolase-type TIM barrel IPN28_03735 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site IPN28_03735 IPR010505 Molybdenum cofactor synthesis C-terminal IPN28_03735 IPR007197 Radical SAM IPN28_03755 IPR023059 Foldase protein PrsA IPN28_03755 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type IPN28_03755 IPR027304 Trigger factor/SurA domain superfamily IPN28_03760 IPR023234 NarG-like domain IPN28_03760 IPR036197 NarG-like superfamily IPN28_03760 IPR003816 Nitrate reductase, gamma subunit IPN28_03765 IPR020945 DMSO/Nitrate reductase chaperone IPN28_03765 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 IPN28_03765 IPR003765 Nitrate reductase chaperone, NarJ IPN28_03765 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 IPN28_03765 IPR036411 TorD-like superfamily IPN28_03775 IPR006547 Nitrate reductase, beta subunit IPN28_03775 IPR029263 Respiratory nitrate reductase beta, C-terminal IPN28_03775 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPN28_03775 IPR038262 Nitrate reductase beta, C-terminal domain superfamily IPN28_03780 IPR037943 Nitrate reductase alpha subunit-like, MopB domain IPN28_03780 IPR028189 Nitrate reductase, alpha subunit, N-terminal IPN28_03780 IPR009010 Aspartate decarboxylase-like domain superfamily IPN28_03780 IPR006468 Nitrate reductase, alpha subunit IPN28_03780 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site IPN28_03780 IPR006657 Molybdopterin dinucleotide-binding domain IPN28_03780 IPR006656 Molybdopterin oxidoreductase IPN28_03780 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IPN28_03780 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site IPN28_03785 IPR004737 Nitrate transporter IPN28_03785 IPR036259 MFS transporter superfamily IPN28_03785 IPR011701 Major facilitator superfamily IPN28_03790 IPR011701 Major facilitator superfamily IPN28_03790 IPR020846 Major facilitator superfamily domain IPN28_03790 IPR036259 MFS transporter superfamily IPN28_03795 IPR036390 Winged helix DNA-binding domain superfamily IPN28_03795 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_03795 IPR018335 Transcription regulator HTH, Crp-type, conserved site IPN28_03795 IPR014710 RmlC-like jelly roll fold IPN28_03795 IPR012318 Crp-type HTH domain IPN28_03795 IPR018490 Cyclic nucleotide-binding-like IPN28_03795 IPR000595 Cyclic nucleotide-binding domain IPN28_03800 IPR005111 MoeA, C-terminal, domain IV IPN28_03800 IPR008284 Molybdenum cofactor biosynthesis, conserved site IPN28_03800 IPR038987 Molybdopterin biosynthesis protein MoeA-like IPN28_03800 IPR036688 MoeA, C-terminal, domain IV superfamily IPN28_03800 IPR005110 MoeA, N-terminal and linker domain IPN28_03800 IPR036135 MoeA, N-terminal and linker domain superfamily IPN28_03800 IPR001453 MoaB/Mog domain IPN28_03800 IPR036425 MoaB/Mog-like domain superfamily IPN28_03810 IPR001539 Peptidase U32 IPN28_03810 IPR036206 Thiamin phosphate synthase superfamily IPN28_03820 IPR012727 Glycine oxidase ThiO IPN28_03820 IPR006076 FAD dependent oxidoreductase IPN28_03820 IPR023209 D-amino-acid oxidase IPN28_03820 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_03825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_03825 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC IPN28_03840 IPR013785 Aldolase-type TIM barrel IPN28_03840 IPR007197 Radical SAM IPN28_03840 IPR024924 7-carboxy-7-deazaguanine synthase-like IPN28_03855 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IPN28_03855 IPR000795 Transcription factor, GTP-binding domain IPN28_03855 IPR033720 Elongation factor Tu, domain 2 IPN28_03855 IPR031157 Tr-type G domain, conserved site IPN28_03855 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_03855 IPR005225 Small GTP-binding protein domain IPN28_03855 IPR004161 Translation elongation factor EFTu-like, domain 2 IPN28_03855 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_03855 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain IPN28_03855 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IPN28_03855 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IPN28_03890 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_03890 IPR005074 Peptidase C39, bacteriocin processing IPN28_03890 IPR017871 ABC transporter, conserved site IPN28_03890 IPR039421 Type I protein exporter IPN28_03890 IPR039395 Peptidase C39-like A IPN28_03890 IPR003439 ABC transporter-like IPN28_03890 IPR011527 ABC transporter type 1, transmembrane domain IPN28_03890 IPR003593 AAA+ ATPase domain IPN28_03890 IPR010132 ATPase, type I secretion system, HlyB IPN28_03890 IPR036640 ABC transporter type 1, transmembrane domain superfamily IPN28_03895 IPR010129 Type I secretion membrane fusion protein, HlyD family IPN28_03895 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IPN28_03900 IPR006223 Glycine cleavage system T protein IPN28_03900 IPR022903 Glycine cleavage system T protein, bacteria IPN28_03900 IPR028896 Aminomethyltransferase-like IPN28_03900 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain IPN28_03900 IPR006222 Aminomethyltransferase, folate-binding domain IPN28_03900 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal IPN28_03900 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 IPN28_03905 IPR033753 Glycine cleavage system H-protein/Simiate IPN28_03905 IPR002930 Glycine cleavage system H-protein IPN28_03905 IPR000089 Biotin/lipoyl attachment IPN28_03905 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPN28_03905 IPR017453 Glycine cleavage system H-protein, subgroup IPN28_03905 IPR011053 Single hybrid motif IPN28_03910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_03910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_03910 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_03910 IPR020581 Glycine cleavage system P protein IPN28_03910 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 IPN28_03925 IPR000192 Aminotransferase class V domain IPN28_03925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_03925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_03925 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_03925 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 IPN28_03925 IPR020581 Glycine cleavage system P protein IPN28_03940 IPR006645 NusG, N-terminal IPN28_03940 IPR014722 Ribosomal protein L2, domain 2 IPN28_03940 IPR005824 KOW IPN28_03940 IPR001062 Transcription antitermination protein, NusG IPN28_03940 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site IPN28_03940 IPR036735 NusG, N-terminal domain superfamily IPN28_03940 IPR008991 Translation protein SH3-like domain superfamily IPN28_03960 IPR020785 Ribosomal protein L11, conserved site IPN28_03960 IPR020783 Ribosomal protein L11, C-terminal IPN28_03960 IPR006519 Ribosomal protein L11, bacterial-type IPN28_03960 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily IPN28_03960 IPR000911 Ribosomal protein L11/L12 IPN28_03960 IPR036769 Ribosomal protein L11, C-terminal domain superfamily IPN28_03960 IPR020784 Ribosomal protein L11, N-terminal IPN28_03965 IPR023673 Ribosomal protein L1, conserved site IPN28_03965 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich IPN28_03965 IPR002143 Ribosomal protein L1 IPN28_03965 IPR005878 Ribosomal protein L1, bacterial-type IPN28_03965 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein IPN28_03965 IPR023674 Ribosomal protein L1-like IPN28_03975 IPR022973 Ribosomal protein L10 IPN28_03975 IPR002363 Ribosomal protein L10, eubacterial, conserved site IPN28_03975 IPR001790 Ribosomal protein L10P IPN28_03980 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily IPN28_03980 IPR008932 Ribosomal protein L7/L12, oligomerisation IPN28_03980 IPR000206 Ribosomal protein L7/L12 IPN28_03980 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like IPN28_03980 IPR013823 Ribosomal protein L7/L12, C-terminal IPN28_03985 IPR007645 RNA polymerase Rpb2, domain 3 IPN28_03985 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily IPN28_03985 IPR015712 DNA-directed RNA polymerase, subunit 2 IPN28_03985 IPR007641 RNA polymerase Rpb2, domain 7 IPN28_03985 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain IPN28_03985 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily IPN28_03985 IPR014724 RNA polymerase Rpb2, OB-fold IPN28_03985 IPR007121 RNA polymerase, beta subunit, conserved site IPN28_03985 IPR007644 RNA polymerase, beta subunit, protrusion IPN28_03985 IPR037034 RNA polymerase Rpb2, domain 2 superfamily IPN28_03985 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain IPN28_03985 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type IPN28_03985 IPR007642 RNA polymerase Rpb2, domain 2 IPN28_03995 IPR042102 RNA polymerase Rpb1, domain 3 superfamily IPN28_03995 IPR007066 RNA polymerase Rpb1, domain 3 IPN28_03995 IPR007080 RNA polymerase Rpb1, domain 1 IPN28_03995 IPR007083 RNA polymerase Rpb1, domain 4 IPN28_03995 IPR038120 RNA polymerase Rpb1, funnel domain superfamily IPN28_03995 IPR012754 DNA-directed RNA polymerase, subunit beta-prime IPN28_03995 IPR000722 RNA polymerase, alpha subunit IPN28_03995 IPR007081 RNA polymerase Rpb1, domain 5 IPN28_03995 IPR006592 RNA polymerase, N-terminal IPN28_04005 IPR005679 Ribosomal protein S12, bacterial-type IPN28_04005 IPR006032 Ribosomal protein S12/S23 IPN28_04005 IPR012340 Nucleic acid-binding, OB-fold IPN28_04010 IPR023798 Ribosomal protein S7 domain IPN28_04010 IPR036823 Ribosomal protein S7 domain superfamily IPN28_04010 IPR020606 Ribosomal protein S7, conserved site IPN28_04010 IPR000235 Ribosomal protein S5/S7 IPN28_04010 IPR005717 Ribosomal protein S7, bacterial/organellar-type IPN28_04015 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_04015 IPR000640 Elongation factor EFG, domain V-like IPN28_04015 IPR035649 EFG, domain V IPN28_04015 IPR004161 Translation elongation factor EFTu-like, domain 2 IPN28_04015 IPR035647 EF-G domain III/V-like IPN28_04015 IPR031157 Tr-type G domain, conserved site IPN28_04015 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04015 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_04015 IPR041095 Elongation Factor G, domain II IPN28_04015 IPR005225 Small GTP-binding protein domain IPN28_04015 IPR000795 Transcription factor, GTP-binding domain IPN28_04015 IPR005517 Translation elongation factor EFG/EF2, domain IV IPN28_04015 IPR004540 Translation elongation factor EFG/EF2 IPN28_04015 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_04015 IPR009022 Elongation factor G, domain III IPN28_04020 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04020 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IPN28_04020 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IPN28_04020 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain IPN28_04020 IPR004161 Translation elongation factor EFTu-like, domain 2 IPN28_04020 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IPN28_04020 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_04020 IPR005225 Small GTP-binding protein domain IPN28_04020 IPR031157 Tr-type G domain, conserved site IPN28_04020 IPR000795 Transcription factor, GTP-binding domain IPN28_04020 IPR033720 Elongation factor Tu, domain 2 IPN28_04025 IPR027486 Ribosomal protein S10 domain IPN28_04025 IPR001848 Ribosomal protein S10 IPN28_04025 IPR018268 Ribosomal protein S10, conserved site IPN28_04025 IPR036838 Ribosomal protein S10 domain superfamily IPN28_04035 IPR019927 Ribosomal protein L3, bacterial/organelle-type IPN28_04035 IPR019926 Ribosomal protein L3, conserved site IPN28_04035 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_04035 IPR000597 Ribosomal protein L3 IPN28_04040 IPR013005 50S ribosomal protein uL4 IPN28_04040 IPR023574 Ribosomal protein L4 domain superfamily IPN28_04040 IPR002136 Ribosomal protein L4/L1e IPN28_04045 IPR013025 Ribosomal protein L25/L23 IPN28_04045 IPR012678 Ribosomal protein L23/L15e core domain superfamily IPN28_04045 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily IPN28_04050 IPR014722 Ribosomal protein L2, domain 2 IPN28_04050 IPR022669 Ribosomal protein L2, C-terminal IPN28_04050 IPR022671 Ribosomal protein L2, conserved site IPN28_04050 IPR014726 Ribosomal protein L2, domain 3 IPN28_04050 IPR005880 Ribosomal protein L2, bacterial/organellar-type IPN28_04050 IPR002171 Ribosomal protein L2 IPN28_04050 IPR008991 Translation protein SH3-like domain superfamily IPN28_04050 IPR012340 Nucleic acid-binding, OB-fold IPN28_04050 IPR022666 Ribosomal Proteins L2, RNA binding domain IPN28_04055 IPR005732 Ribosomal protein S19, bacterial-type IPN28_04055 IPR002222 Ribosomal protein S19/S15 IPN28_04055 IPR023575 Ribosomal protein S19, superfamily IPN28_04055 IPR020934 Ribosomal protein S19 conserved site IPN28_04060 IPR036394 Ribosomal protein L22/L17 superfamily IPN28_04060 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type IPN28_04060 IPR001063 Ribosomal protein L22/L17 IPN28_04065 IPR036419 Ribosomal protein S3, C-terminal domain superfamily IPN28_04065 IPR001351 Ribosomal protein S3, C-terminal IPN28_04065 IPR005704 Ribosomal protein S3, bacterial-type IPN28_04065 IPR009019 K homology domain superfamily, prokaryotic type IPN28_04065 IPR004044 K Homology domain, type 2 IPN28_04065 IPR015946 K homology domain-like, alpha/beta IPN28_04065 IPR004087 K Homology domain IPN28_04065 IPR018280 Ribosomal protein S3, conserved site IPN28_04070 IPR016180 Ribosomal protein L10e/L16 IPN28_04070 IPR036920 Ribosomal protein L10e/L16 superfamily IPN28_04070 IPR000114 Ribosomal protein L16 IPN28_04070 IPR020798 Ribosomal protein L16, conserved site IPN28_04075 IPR001854 Ribosomal protein L29/L35 IPN28_04075 IPR018254 Ribosomal protein L29, conserved site IPN28_04075 IPR036049 Ribosomal protein L29/L35 superfamily IPN28_04080 IPR019984 30S ribosomal protein S17 IPN28_04080 IPR000266 Ribosomal protein S17/S11 IPN28_04080 IPR012340 Nucleic acid-binding, OB-fold IPN28_04080 IPR019979 Ribosomal protein S17, conserved site IPN28_04085 IPR019972 Ribosomal protein L14P, conserved site IPN28_04085 IPR005745 Ribosomal protein L14P, bacterial-type IPN28_04085 IPR000218 Ribosomal protein L14P IPN28_04085 IPR036853 Ribosomal protein L14 superfamily IPN28_04090 IPR014722 Ribosomal protein L2, domain 2 IPN28_04090 IPR003256 Ribosomal protein L24 IPN28_04090 IPR005825 Ribosomal protein L24/L26, conserved site IPN28_04090 IPR008991 Translation protein SH3-like domain superfamily IPN28_04090 IPR005824 KOW IPN28_04090 IPR041988 Ribosomal Protein L26/L24, KOW domain IPN28_04095 IPR002132 Ribosomal protein L5 IPN28_04095 IPR022803 Ribosomal protein L5 domain superfamily IPN28_04095 IPR020930 Ribosomal protein L5, bacterial-type IPN28_04095 IPR031309 Ribosomal protein L5, C-terminal IPN28_04095 IPR020929 Ribosomal protein L5, conserved site IPN28_04095 IPR031310 Ribosomal protein L5, N-terminal IPN28_04100 IPR018271 Ribosomal protein S14, conserved site IPN28_04100 IPR023036 Ribosomal protein S14, bacterial/plastid IPN28_04100 IPR001209 Ribosomal protein S14 IPN28_04105 IPR000630 Ribosomal protein S8 IPN28_04105 IPR035987 Ribosomal protein S8 superfamily IPN28_04110 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily IPN28_04110 IPR020040 Ribosomal protein L6, alpha-beta domain IPN28_04110 IPR000702 Ribosomal protein L6 IPN28_04110 IPR002358 Ribosomal protein L6, conserved site IPN28_04110 IPR019906 Ribosomal protein L6, bacterial-type IPN28_04115 IPR005484 Ribosomal protein L18 IPN28_04115 IPR004389 Ribosomal protein L18, bacterial-type IPN28_04120 IPR018192 Ribosomal protein S5, N-terminal, conserved site IPN28_04120 IPR005324 Ribosomal protein S5, C-terminal IPN28_04120 IPR005712 Ribosomal protein S5, bacterial-type IPN28_04120 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_04120 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_04120 IPR013810 Ribosomal protein S5, N-terminal IPN28_04120 IPR000851 Ribosomal protein S5 IPN28_04125 IPR005996 Ribosomal protein L30, bacterial-type IPN28_04125 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily IPN28_04125 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain IPN28_04130 IPR030878 Ribosomal protein L15 IPN28_04130 IPR005749 Ribosomal protein L15, bacterial-type IPN28_04130 IPR001196 Ribosomal protein L15, conserved site IPN28_04130 IPR021131 Ribosomal protein L18e/L15P IPN28_04130 IPR036227 Ribosomal L18e/L15P superfamily IPN28_04145 IPR023201 SecY domain superfamily IPN28_04145 IPR030659 SecY conserved site IPN28_04145 IPR002208 SecY/SEC61-alpha family IPN28_04145 IPR026593 Protein translocase subunit SecY IPN28_04150 IPR006259 Adenylate kinase subfamily IPN28_04150 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04150 IPR033690 Adenylate kinase, conserved site IPN28_04150 IPR000850 Adenylate kinase/UMP-CMP kinase IPN28_04155 IPR029055 Nucleophile aminohydrolases, N-terminal IPN28_04155 IPR000246 Peptidase T2, asparaginase 2 IPN28_04160 IPR018269 Ribosomal protein S13, conserved site IPN28_04160 IPR027437 30s ribosomal protein S13, C-terminal IPN28_04160 IPR019980 Ribosomal protein S13, bacterial-type IPN28_04160 IPR001892 Ribosomal protein S13 IPN28_04160 IPR010979 Ribosomal protein S13-like, H2TH IPN28_04165 IPR001971 Ribosomal protein S11 IPN28_04165 IPR019981 Ribosomal protein S11, bacterial-type IPN28_04165 IPR036967 Ribosomal protein S11 superfamily IPN28_04165 IPR018102 Ribosomal S11, conserved site IPN28_04170 IPR036603 RNA polymerase, RBP11-like subunit IPN28_04170 IPR011262 DNA-directed RNA polymerase, insert domain IPN28_04170 IPR036643 DNA-directed RNA polymerase, insert domain superfamily IPN28_04170 IPR011773 DNA-directed RNA polymerase, alpha subunit IPN28_04170 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type IPN28_04170 IPR011260 RNA polymerase, alpha subunit, C-terminal IPN28_04175 IPR000456 Ribosomal protein L17 IPN28_04175 IPR036373 Ribosomal protein L17 superfamily IPN28_04180 IPR003721 Pantoate-beta-alanine ligase IPN28_04180 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain IPN28_04180 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_04180 IPR004821 Cytidyltransferase-like domain IPN28_04185 IPR040442 Pyruvate kinase-like domain superfamily IPN28_04185 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IPN28_04185 IPR003700 Ketopantoate hydroxymethyltransferase IPN28_04190 IPR011782 Peptidase S1C, Do IPN28_04190 IPR009003 Peptidase S1, PA clan IPN28_04190 IPR001940 Peptidase S1C IPN28_04190 IPR001478 PDZ domain IPN28_04190 IPR036034 PDZ superfamily IPN28_04205 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IPN28_04205 IPR006195 Aminoacyl-tRNA synthetase, class II IPN28_04205 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 IPN28_04205 IPR022961 Glycine-tRNA ligase, bacterial IPN28_04205 IPR004154 Anticodon-binding IPN28_04205 IPR036621 Anticodon-binding domain superfamily IPN28_04205 IPR033731 Glycyl-tRNA synthetase-like core domain IPN28_04205 IPR002315 Glycyl-tRNA synthetase IPN28_04210 IPR029045 ClpP/crotonase-like domain superfamily IPN28_04210 IPR023171 Na/H antiporter domain superfamily IPN28_04210 IPR002142 Peptidase S49 IPN28_04210 IPR004670 Na+/H+ antiporter NhaA IPN28_04230 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IPN28_04230 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPN28_04230 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IPN28_04230 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPN28_04230 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPN28_04230 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain IPN28_04230 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IPN28_04250 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type IPN28_04250 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal IPN28_04250 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPN28_04250 IPR036291 NAD(P)-binding domain superfamily IPN28_04250 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation IPN28_04250 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily IPN28_04250 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal IPN28_04250 IPR017476 UDP-glucose/GDP-mannose dehydrogenase IPN28_04255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_04255 IPR011784 Sulphate adenylyltransferase, small subunit IPN28_04255 IPR002500 Phosphoadenosine phosphosulphate reductase IPN28_04260 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04260 IPR031157 Tr-type G domain, conserved site IPN28_04260 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain IPN28_04260 IPR000795 Transcription factor, GTP-binding domain IPN28_04260 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_04260 IPR011779 Sulphate adenylyltransferase, large subunit IPN28_04260 IPR002891 Adenylyl-sulfate kinase IPN28_04260 IPR005225 Small GTP-binding protein domain IPN28_04260 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IPN28_04265 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ IPN28_04265 IPR020583 Inositol monophosphatase, metal-binding site IPN28_04265 IPR000760 Inositol monophosphatase-like IPN28_04265 IPR020550 Inositol monophosphatase, conserved site IPN28_04290 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_04290 IPR013324 RNA polymerase sigma factor, region 3/4-like IPN28_04290 IPR039425 RNA polymerase sigma-70 like IPN28_04290 IPR013325 RNA polymerase sigma factor, region 2 IPN28_04290 IPR014286 RNA polymerase sigma-70 RpoE type IPN28_04290 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IPN28_04290 IPR007627 RNA polymerase sigma-70 region 2 IPN28_04290 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site IPN28_04290 IPR014284 RNA polymerase sigma-70 like domain IPN28_04295 IPR021908 Protein of unknown function DUF3520 IPN28_04295 IPR002035 von Willebrand factor, type A IPN28_04295 IPR022156 Uncharacterised protein YfbK, N-terminal IPN28_04295 IPR036465 von Willebrand factor A-like domain superfamily IPN28_04305 IPR036237 Xylose isomerase-like superfamily IPN28_04305 IPR007801 Uncharacterised protein family UPF0276 IPN28_04315 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily IPN28_04315 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04315 IPR017871 ABC transporter, conserved site IPN28_04315 IPR003439 ABC transporter-like IPN28_04315 IPR032524 ABC transporter Uup, C-terminal IPN28_04315 IPR003593 AAA+ ATPase domain IPN28_04325 IPR009770 Domain of unknown function DUF1338 IPN28_04330 IPR016162 Aldehyde dehydrogenase, N-terminal IPN28_04330 IPR015590 Aldehyde dehydrogenase domain IPN28_04330 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent IPN28_04330 IPR016160 Aldehyde dehydrogenase, cysteine active site IPN28_04330 IPR016161 Aldehyde/histidinol dehydrogenase IPN28_04330 IPR016163 Aldehyde dehydrogenase, C-terminal IPN28_04330 IPR010102 Succinate semialdehyde dehydrogenase IPN28_04345 IPR005097 Saccharopine dehydrogenase, NADP binding domain IPN28_04345 IPR032095 Saccharopine dehydrogenase, C-terminal IPN28_04345 IPR036291 NAD(P)-binding domain superfamily IPN28_04355 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPN28_04355 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IPN28_04355 IPR005730 Carboxynorspermidine decarboxylase IPN28_04355 IPR029066 PLP-binding barrel IPN28_04360 IPR002347 Short-chain dehydrogenase/reductase SDR IPN28_04360 IPR036291 NAD(P)-binding domain superfamily IPN28_04360 IPR020904 Short-chain dehydrogenase/reductase, conserved site IPN28_04375 IPR000845 Nucleoside phosphorylase domain IPN28_04375 IPR035994 Nucleoside phosphorylase superfamily IPN28_04375 IPR010044 Methylthioadenosine phosphorylase (MTAP) IPN28_04380 IPR001902 SLC26A/SulP transporter IPN28_04380 IPR002645 STAS domain IPN28_04380 IPR036513 STAS domain superfamily IPN28_04380 IPR011547 SLC26A/SulP transporter domain IPN28_04390 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily IPN28_04390 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain IPN28_04390 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site IPN28_04390 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit IPN28_04390 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain IPN28_04395 IPR017938 Riboflavin synthase-like beta-barrel IPN28_04395 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding IPN28_04395 IPR001094 Flavodoxin-like IPN28_04395 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily IPN28_04395 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain IPN28_04395 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain IPN28_04395 IPR029039 Flavoprotein-like superfamily IPN28_04395 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase IPN28_04395 IPR008254 Flavodoxin/nitric oxide synthase IPN28_04395 IPR001433 Oxidoreductase FAD/NAD(P)-binding IPN28_04395 IPR017927 FAD-binding domain, ferredoxin reductase-type IPN28_04395 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria IPN28_04400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_04400 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase IPN28_04400 IPR011798 Adenosine 5'-phosphosulphate reductase IPN28_04400 IPR002500 Phosphoadenosine phosphosulphate reductase IPN28_04405 IPR014777 Tetrapyrrole methylase, subdomain 1 IPN28_04405 IPR000878 Tetrapyrrole methylase IPN28_04405 IPR035996 Tetrapyrrole methylase superfamily IPN28_04405 IPR006366 Uroporphyrin-III C-methyltransferase IPN28_04405 IPR014776 Tetrapyrrole methylase, subdomain 2 IPN28_04405 IPR012409 Sirohaem synthase IPN28_04405 IPR028281 Siroheme synthase, central domain IPN28_04405 IPR036291 NAD(P)-binding domain superfamily IPN28_04405 IPR019478 Sirohaem synthase, dimerisation domain IPN28_04405 IPR037115 Sirohaem synthase, dimerisation domain superfamily IPN28_04405 IPR006367 Sirohaem synthase, N-terminal IPN28_04405 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site IPN28_04425 IPR036526 Carbon-nitrogen hydrolase superfamily IPN28_04425 IPR003010 Carbon-nitrogen hydrolase IPN28_04430 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type IPN28_04430 IPR017754 Agmatine deiminase IPN28_04440 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPN28_04440 IPR002986 Diaminopimelate decarboxylase, LysA IPN28_04440 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IPN28_04440 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IPN28_04440 IPR000183 Ornithine/DAP/Arg decarboxylase IPN28_04440 IPR029066 PLP-binding barrel IPN28_04450 IPR016160 Aldehyde dehydrogenase, cysteine active site IPN28_04450 IPR016161 Aldehyde/histidinol dehydrogenase IPN28_04450 IPR016163 Aldehyde dehydrogenase, C-terminal IPN28_04450 IPR015590 Aldehyde dehydrogenase domain IPN28_04450 IPR016162 Aldehyde dehydrogenase, N-terminal IPN28_04500 IPR004299 Membrane bound O-acyl transferase, MBOAT IPN28_04500 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB IPN28_04500 IPR028362 Alginate O-acetyltransferase AlgI IPN28_04505 IPR020806 Polyketide synthase, phosphopantetheine-binding domain IPN28_04505 IPR006162 Phosphopantetheine attachment site IPN28_04505 IPR009081 Phosphopantetheine binding ACP domain IPN28_04505 IPR003231 Acyl carrier protein (ACP) IPN28_04505 IPR036736 ACP-like superfamily IPN28_04520 IPR004176 Clp, N-terminal IPN28_04520 IPR001270 ClpA/B family IPN28_04520 IPR041546 ClpA/ClpB, AAA lid domain IPN28_04520 IPR018368 ClpA/B, conserved site 1 IPN28_04520 IPR003593 AAA+ ATPase domain IPN28_04520 IPR003959 ATPase, AAA-type, core IPN28_04520 IPR028299 ClpA/B, conserved site 2 IPN28_04520 IPR019489 Clp ATPase, C-terminal IPN28_04520 IPR036628 Clp, N-terminal domain superfamily IPN28_04520 IPR017730 Chaperonin ClpB IPN28_04520 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04545 IPR012938 Glucose/Sorbosone dehydrogenase IPN28_04545 IPR011042 Six-bladed beta-propeller, TolB-like IPN28_04545 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase IPN28_04550 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid IPN28_04550 IPR001599 Alpha-2-macroglobulin IPN28_04550 IPR013783 Immunoglobulin-like fold IPN28_04550 IPR002890 Macroglobulin domain IPN28_04550 IPR011626 Alpha-macroglobulin-like, TED domain IPN28_04550 IPR011625 Alpha-2-macroglobulin, bait region domain IPN28_04550 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain IPN28_04565 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase IPN28_04565 IPR007197 Radical SAM IPN28_04565 IPR013785 Aldolase-type TIM barrel IPN28_04570 IPR017039 Virulence factor BrkB IPN28_04570 IPR023679 Uncharacterised protein family UPF0761, bacterial IPN28_04585 IPR024084 Isopropylmalate dehydrogenase-like domain IPN28_04585 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site IPN28_04585 IPR004790 Isocitrate dehydrogenase NADP-dependent IPN28_04590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_04590 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_04590 IPR035891 CheY-binding domain of CheA IPN28_04590 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IPN28_04590 IPR002545 CheW-like domain IPN28_04590 IPR036061 CheW-like domain superfamily IPN28_04590 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding IPN28_04590 IPR004105 Histidine kinase CheA-like, homodimeric domain IPN28_04590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_04590 IPR005467 Histidine kinase domain IPN28_04590 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily IPN28_04590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_04590 IPR036641 HPT domain superfamily IPN28_04590 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily IPN28_04615 IPR011006 CheY-like superfamily IPN28_04615 IPR001789 Signal transduction response regulator, receiver domain IPN28_04625 IPR010916 TonB box, conserved site IPN28_04625 IPR010101 TonB-dependent vitamin B12 transporter BtuB IPN28_04625 IPR012910 TonB-dependent receptor, plug domain IPN28_04625 IPR037066 TonB-dependent receptor, plug domain superfamily IPN28_04625 IPR000531 TonB-dependent receptor-like, beta-barrel IPN28_04625 IPR039426 Vitamin B12 transporter BtuB-like IPN28_04625 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily IPN28_04630 IPR035965 PAS domain superfamily IPN28_04630 IPR011006 CheY-like superfamily IPN28_04630 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_04630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_04630 IPR001789 Signal transduction response regulator, receiver domain IPN28_04630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_04630 IPR013656 PAS fold-4 IPN28_04630 IPR005467 Histidine kinase domain IPN28_04630 IPR000014 PAS domain IPN28_04630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_04630 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_04635 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04635 IPR025944 Sigma-54 interaction domain, conserved site IPN28_04635 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPN28_04635 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPN28_04635 IPR009057 Homeobox-like domain superfamily IPN28_04635 IPR001789 Signal transduction response regulator, receiver domain IPN28_04635 IPR011006 CheY-like superfamily IPN28_04635 IPR002078 RNA polymerase sigma factor 54 interaction domain IPN28_04635 IPR003593 AAA+ ATPase domain IPN28_04645 IPR001789 Signal transduction response regulator, receiver domain IPN28_04645 IPR011006 CheY-like superfamily IPN28_04655 IPR017814 Mycothiol biosynthesis protein, MshA IPN28_04655 IPR001296 Glycosyl transferase, family 1 IPN28_04655 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPN28_04660 IPR001173 Glycosyltransferase 2-like IPN28_04660 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_04665 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_04665 IPR001173 Glycosyltransferase 2-like IPN28_04680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_04680 IPR013216 Methyltransferase type 11 IPN28_04710 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_04710 IPR018317 Queuosine biosynthesis protein QueC IPN28_04715 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily IPN28_04715 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family IPN28_04720 IPR024924 7-carboxy-7-deazaguanine synthase-like IPN28_04720 IPR007197 Radical SAM IPN28_04720 IPR013785 Aldolase-type TIM barrel IPN28_04720 IPR017742 7-carboxy-7-deazaguanine synthase IPN28_04725 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF IPN28_04725 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 IPN28_04735 IPR038765 Papain-like cysteine peptidase superfamily IPN28_04735 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family IPN28_04750 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04750 IPR041628 ChlI/MoxR, AAA lid domain IPN28_04750 IPR011703 ATPase, AAA-3 IPN28_04755 IPR002881 Domain of unknown function DUF58 IPN28_04755 IPR036465 von Willebrand factor A-like domain superfamily IPN28_04765 IPR033881 von Willebrand factor domain BatA-type IPN28_04765 IPR036465 von Willebrand factor A-like domain superfamily IPN28_04765 IPR002035 von Willebrand factor, type A IPN28_04770 IPR002035 von Willebrand factor, type A IPN28_04770 IPR022933 Uncharacterised protein family UPF0353 IPN28_04770 IPR036465 von Willebrand factor A-like domain superfamily IPN28_04770 IPR024163 Aerotolerance regulator, N-terminal IPN28_04800 IPR003593 AAA+ ATPase domain IPN28_04800 IPR003439 ABC transporter-like IPN28_04800 IPR017871 ABC transporter, conserved site IPN28_04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04810 IPR001647 DNA-binding HTH domain, TetR-type IPN28_04810 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPN28_04810 IPR009057 Homeobox-like domain superfamily IPN28_04810 IPR011075 Tetracyclin repressor-like, C-terminal domain IPN28_04820 IPR000014 PAS domain IPN28_04820 IPR035965 PAS domain superfamily IPN28_04820 IPR013655 PAS fold-3 IPN28_04820 IPR001610 PAC motif IPN28_04820 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPN28_04820 IPR004090 Chemotaxis methyl-accepting receptor IPN28_04820 IPR003660 HAMP domain IPN28_04830 IPR003829 Pirin, N-terminal domain IPN28_04830 IPR011051 RmlC-like cupin domain superfamily IPN28_04830 IPR012093 Pirin IPN28_04830 IPR014710 RmlC-like jelly roll fold IPN28_04830 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain IPN28_04835 IPR035651 BipA, domain V IPN28_04835 IPR035647 EF-G domain III/V-like IPN28_04835 IPR031157 Tr-type G domain, conserved site IPN28_04835 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04835 IPR006298 GTP-binding protein TypA IPN28_04835 IPR042116 GTP-binding protein TypA/BipA, C-terminal IPN28_04835 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_04835 IPR000795 Transcription factor, GTP-binding domain IPN28_04835 IPR005225 Small GTP-binding protein domain IPN28_04835 IPR000640 Elongation factor EFG, domain V-like IPN28_04835 IPR004161 Translation elongation factor EFTu-like, domain 2 IPN28_04845 IPR006512 YidE/YbjL duplication IPN28_04845 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IPN28_04845 IPR023017 Transport protein YbjL, putative IPN28_04845 IPR006037 Regulator of K+ conductance, C-terminal IPN28_04850 IPR006638 Elp3/MiaB/NifB IPN28_04850 IPR034505 Anaerobic coproporphyrinogen-III oxidase IPN28_04850 IPR023404 Radical SAM, alpha/beta horseshoe IPN28_04850 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN IPN28_04850 IPR007197 Radical SAM IPN28_04860 IPR036950 Penicillin binding protein transglycosylase domain IPN28_04860 IPR012338 Beta-lactamase/transpeptidase-like IPN28_04860 IPR001460 Penicillin-binding protein, transpeptidase IPN28_04860 IPR001264 Glycosyl transferase, family 51 IPN28_04860 IPR011815 Penicillin-binding protein 1C IPN28_04860 IPR009647 Penicillin-binding, C-terminal IPN28_04860 IPR023346 Lysozyme-like domain superfamily IPN28_04875 IPR001204 Phosphate transporter IPN28_04880 IPR018445 Putative phosphate transport regulator IPN28_04880 IPR038078 PhoU-like domain superfamily IPN28_04885 IPR002347 Short-chain dehydrogenase/reductase SDR IPN28_04885 IPR036291 NAD(P)-binding domain superfamily IPN28_04885 IPR011294 3-hydroxybutyrate dehydrogenase IPN28_04885 IPR020904 Short-chain dehydrogenase/reductase, conserved site IPN28_04890 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain IPN28_04890 IPR002470 Peptidase S9A, prolyl oligopeptidase IPN28_04890 IPR002471 Peptidase S9, serine active site IPN28_04890 IPR029058 Alpha/Beta hydrolase fold IPN28_04890 IPR023302 Peptidase S9A, N-terminal domain IPN28_04915 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPN28_04915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_04915 IPR008909 DALR anticodon binding IPN28_04915 IPR005148 Arginyl tRNA synthetase N-terminal domain IPN28_04915 IPR001278 Arginine-tRNA ligase IPN28_04915 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily IPN28_04915 IPR035684 Arginyl-tRNA synthetase, catalytic core domain IPN28_04915 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPN28_04920 IPR031100 LOG family IPN28_04920 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG IPN28_04925 IPR005247 YbhB/YbcL IPN28_04925 IPR008914 Phosphatidylethanolamine-binding protein IPN28_04925 IPR036610 PEBP-like superfamily IPN28_04930 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain IPN28_04930 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPN28_04930 IPR001279 Metallo-beta-lactamase IPN28_04930 IPR022712 Beta-Casp domain IPN28_04940 IPR008567 3-keto-5-aminohexanoate cleavage enzyme IPN28_04940 IPR013785 Aldolase-type TIM barrel IPN28_04950 IPR002288 DNA gyrase B subunit, C-terminal IPN28_04950 IPR011557 DNA gyrase, subunit B IPN28_04950 IPR034160 DNA gyrase subunit B, TOPRIM domain IPN28_04950 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_04950 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 IPN28_04950 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_04950 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_04950 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal IPN28_04950 IPR006171 TOPRIM domain IPN28_04950 IPR018522 DNA topoisomerase, type IIA, conserved site IPN28_04950 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IPN28_04950 IPR001241 DNA topoisomerase, type IIA IPN28_04950 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_04955 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_04955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_04955 IPR005861 Histidinol-phosphate aminotransferase family IPN28_04955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_04955 IPR004839 Aminotransferase, class I/classII IPN28_04960 IPR023459 Transcription elongation factor GreA/GreB family IPN28_04960 IPR028624 Transcription elongation factor GreA/GreB IPN28_04960 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal IPN28_04960 IPR006358 Transcription elongation factor GreB IPN28_04960 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily IPN28_04960 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal IPN28_04960 IPR018151 Transcription elongation factor, GreA/GreB, conserved site IPN28_04960 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily IPN28_04975 IPR008858 TROVE domain IPN28_04975 IPR037214 TROVE domain superfamily IPN28_04975 IPR036465 von Willebrand factor A-like domain superfamily IPN28_04975 IPR040322 60kDa SS-A/Ro ribonucleoprotein IPN28_04990 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_04990 IPR011527 ABC transporter type 1, transmembrane domain IPN28_04990 IPR039421 Type I protein exporter IPN28_04990 IPR003593 AAA+ ATPase domain IPN28_04990 IPR003439 ABC transporter-like IPN28_04990 IPR017871 ABC transporter, conserved site IPN28_04990 IPR036640 ABC transporter type 1, transmembrane domain superfamily IPN28_05000 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal IPN28_05000 IPR013785 Aldolase-type TIM barrel IPN28_05010 IPR005946 Ribose-phosphate pyrophosphokinase IPN28_05010 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type IPN28_05010 IPR029057 Phosphoribosyltransferase-like IPN28_05010 IPR000836 Phosphoribosyltransferase domain IPN28_05010 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain IPN28_05010 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site IPN28_05015 IPR016471 Nicotinamide phosphoribosyl transferase IPN28_05015 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal IPN28_05015 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase IPN28_05015 IPR013785 Aldolase-type TIM barrel IPN28_05035 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IPN28_05035 IPR006143 RND efflux pump, membrane fusion protein IPN28_05040 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IPN28_05040 IPR001036 Acriflavin resistance protein IPN28_05040 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 IPN28_05045 IPR010131 RND efflux system, outer membrane lipoprotein, NodT IPN28_05045 IPR003423 Outer membrane efflux protein IPN28_05050 IPR003791 Protein of unknown function UPF0178 IPN28_05070 IPR032781 ABC-transporter extension domain IPN28_05070 IPR003439 ABC transporter-like IPN28_05070 IPR017871 ABC transporter, conserved site IPN28_05070 IPR003593 AAA+ ATPase domain IPN28_05070 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_05085 IPR006204 GHMP kinase N-terminal domain IPN28_05085 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_05085 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_05085 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase IPN28_05085 IPR013750 GHMP kinase, C-terminal domain IPN28_05085 IPR036554 GHMP kinase, C-terminal domain superfamily IPN28_05095 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase IPN28_05095 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPN28_05095 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_05100 IPR005273 Uracil-DNA glycosylase family 4 IPN28_05100 IPR036895 Uracil-DNA glycosylase-like domain superfamily IPN28_05100 IPR005122 Uracil-DNA glycosylase-like IPN28_05105 IPR023346 Lysozyme-like domain superfamily IPN28_05105 IPR012289 Lytic transglycosylase, superhelical linker IPN28_05105 IPR008939 Lytic transglycosylase, superhelical U-shaped IPN28_05105 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily IPN28_05105 IPR008258 Transglycosylase SLT domain 1 IPN28_05105 IPR000189 Prokaryotic transglycosylase, active site IPN28_05120 IPR000760 Inositol monophosphatase-like IPN28_05125 IPR002318 Alanine-tRNA ligase, class IIc IPN28_05125 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily IPN28_05125 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain IPN28_05125 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria IPN28_05125 IPR003156 DHHA1 domain IPN28_05125 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal IPN28_05125 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IPN28_05125 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_05125 IPR012947 Threonyl/alanyl tRNA synthetase, SAD IPN28_05130 IPR001564 Nucleoside diphosphate kinase IPN28_05130 IPR023005 Nucleoside diphosphate kinase, active site IPN28_05130 IPR036850 Nucleoside diphosphate kinase-like domain superfamily IPN28_05130 IPR034907 Nucleoside diphosphate kinase-like domain IPN28_05155 IPR001564 Nucleoside diphosphate kinase IPN28_05155 IPR023005 Nucleoside diphosphate kinase, active site IPN28_05155 IPR036850 Nucleoside diphosphate kinase-like domain superfamily IPN28_05155 IPR034907 Nucleoside diphosphate kinase-like domain IPN28_05160 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_05160 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_05160 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IPN28_05160 IPR036641 HPT domain superfamily IPN28_05160 IPR011006 CheY-like superfamily IPN28_05160 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_05160 IPR005467 Histidine kinase domain IPN28_05160 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_05160 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_05160 IPR003660 HAMP domain IPN28_05160 IPR033414 Periplasmic sensor domain IPN28_05160 IPR001789 Signal transduction response regulator, receiver domain IPN28_05170 IPR002376 Formyl transferase, N-terminal IPN28_05170 IPR036477 Formyl transferase, N-terminal domain superfamily IPN28_05170 IPR004607 Phosphoribosylglycinamide formyltransferase IPN28_05170 IPR001555 Phosphoribosylglycinamide formyltransferase, active site IPN28_05175 IPR016188 PurM-like, N-terminal domain IPN28_05175 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase IPN28_05175 IPR036921 PurM-like, N-terminal domain superfamily IPN28_05175 IPR010918 PurM-like, C-terminal domain IPN28_05175 IPR036676 PurM-like, C-terminal domain superfamily IPN28_05185 IPR002549 Transmembrane protein TqsA-like IPN28_05200 IPR012337 Ribonuclease H-like superfamily IPN28_05200 IPR002121 HRDC domain IPN28_05200 IPR010997 HRDC-like superfamily IPN28_05200 IPR002562 3'-5' exonuclease domain IPN28_05200 IPR036397 Ribonuclease H superfamily IPN28_05200 IPR006292 Ribonuclease D IPN28_05210 IPR004524 Aspartate-tRNA ligase, type 1 IPN28_05210 IPR012340 Nucleic acid-binding, OB-fold IPN28_05210 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IPN28_05210 IPR029351 GAD domain IPN28_05210 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb IPN28_05210 IPR004115 GAD-like domain superfamily IPN28_05210 IPR006195 Aminoacyl-tRNA synthetase, class II IPN28_05210 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IPN28_05220 IPR000073 Alpha/beta hydrolase fold-1 IPN28_05220 IPR029058 Alpha/Beta hydrolase fold IPN28_05220 IPR000639 Epoxide hydrolase-like IPN28_05240 IPR029787 Nucleotide cyclase IPN28_05240 IPR035919 EAL domain superfamily IPN28_05240 IPR000014 PAS domain IPN28_05240 IPR000700 PAS-associated, C-terminal IPN28_05240 IPR035965 PAS domain superfamily IPN28_05240 IPR001633 EAL domain IPN28_05240 IPR007895 MASE1 IPN28_05240 IPR001610 PAC motif IPN28_05240 IPR000160 GGDEF domain IPN28_05240 IPR013656 PAS fold-4 IPN28_05240 IPR013655 PAS fold-3 IPN28_05250 IPR001789 Signal transduction response regulator, receiver domain IPN28_05250 IPR011006 CheY-like superfamily IPN28_05255 IPR011006 CheY-like superfamily IPN28_05255 IPR001789 Signal transduction response regulator, receiver domain IPN28_05255 IPR029787 Nucleotide cyclase IPN28_05255 IPR000160 GGDEF domain IPN28_05265 IPR001900 Ribonuclease II/R IPN28_05265 IPR003029 S1 domain IPN28_05265 IPR004476 Ribonuclease II/ribonuclease R IPN28_05265 IPR011805 Ribonuclease R IPN28_05265 IPR013668 Ribonuclease R winged-helix domain IPN28_05265 IPR022967 RNA-binding domain, S1 IPN28_05265 IPR040476 RNase II/RNase R, cold shock domain IPN28_05265 IPR022966 Ribonuclease II/R, conserved site IPN28_05265 IPR011129 Cold shock domain IPN28_05265 IPR013223 Ribonuclease B, N-terminal OB domain IPN28_05265 IPR012340 Nucleic acid-binding, OB-fold IPN28_05270 IPR028612 DNA topoisomerase I, type IA IPN28_05270 IPR034149 DNA topoisomerase 1, TOPRIM domain IPN28_05270 IPR006171 TOPRIM domain IPN28_05270 IPR025589 Topoisomerase C-terminal repeat IPN28_05270 IPR005733 DNA topoisomerase I, bacterial-type IPN28_05270 IPR023405 DNA topoisomerase, type IA, core domain IPN28_05270 IPR003602 DNA topoisomerase, type IA, DNA-binding domain IPN28_05270 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 IPN28_05270 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 IPN28_05270 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 IPN28_05270 IPR013498 DNA topoisomerase, type IA, zn finger IPN28_05270 IPR013497 DNA topoisomerase, type IA, central IPN28_05270 IPR023406 DNA topoisomerase, type IA, active site IPN28_05270 IPR003601 DNA topoisomerase, type IA, domain 2 IPN28_05270 IPR000380 DNA topoisomerase, type IA IPN28_05275 IPR003488 DNA recombination-mediator protein A IPN28_05275 IPR041614 DprA, winged helix domain IPN28_05275 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_05285 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY IPN28_05295 IPR006130 Aspartate/ornithine carbamoyltransferase IPN28_05295 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding IPN28_05295 IPR002082 Aspartate carbamoyltransferase IPN28_05295 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain IPN28_05295 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily IPN28_05305 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_05305 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_05305 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_05305 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_05305 IPR000014 PAS domain IPN28_05305 IPR035965 PAS domain superfamily IPN28_05305 IPR013656 PAS fold-4 IPN28_05305 IPR005467 Histidine kinase domain IPN28_05305 IPR011006 CheY-like superfamily IPN28_05305 IPR001789 Signal transduction response regulator, receiver domain IPN28_05305 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_05310 IPR019247 Histidine kinase BarA, N-terminal IPN28_05310 IPR011006 CheY-like superfamily IPN28_05310 IPR036641 HPT domain superfamily IPN28_05310 IPR003660 HAMP domain IPN28_05310 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_05310 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_05310 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_05310 IPR001789 Signal transduction response regulator, receiver domain IPN28_05310 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IPN28_05310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_05310 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_05310 IPR005467 Histidine kinase domain IPN28_05315 IPR012080 Aspartate-semialdehyde dehydrogenase IPN28_05315 IPR000534 Semialdehyde dehydrogenase, NAD-binding IPN28_05315 IPR036291 NAD(P)-binding domain superfamily IPN28_05315 IPR012280 Semialdehyde dehydrogenase, dimerisation domain IPN28_05315 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type IPN28_05315 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site IPN28_05340 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit IPN28_05340 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit IPN28_05340 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site IPN28_05340 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit IPN28_05345 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit IPN28_05345 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor IPN28_05345 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit IPN28_05355 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit IPN28_05355 IPR011281 Succinate dehydrogenase, flavoprotein subunit IPN28_05355 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily IPN28_05355 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal IPN28_05355 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily IPN28_05355 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site IPN28_05355 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_05355 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain IPN28_05360 IPR001633 EAL domain IPN28_05360 IPR005330 MHYT domain IPN28_05360 IPR035919 EAL domain superfamily IPN28_05360 IPR029787 Nucleotide cyclase IPN28_05360 IPR000160 GGDEF domain IPN28_05370 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein IPN28_05370 IPR009051 Alpha-helical ferredoxin IPN28_05370 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal IPN28_05370 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site IPN28_05370 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPN28_05370 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPN28_05370 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IPN28_05370 IPR036010 2Fe-2S ferredoxin-like superfamily IPN28_05370 IPR012675 Beta-grasp domain superfamily IPN28_05375 IPR003746 Protein of unknown function DUF167 IPN28_05375 IPR036591 YggU-like superfamily IPN28_05385 IPR017508 HipA, N-terminal subdomain 1 IPN28_05385 IPR012893 HipA-like, C-terminal IPN28_05400 IPR005119 LysR, substrate-binding IPN28_05400 IPR036390 Winged helix DNA-binding domain superfamily IPN28_05400 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_05400 IPR000847 Transcription regulator HTH, LysR IPN28_05405 IPR003719 Phenazine biosynthesis PhzF protein IPN28_05410 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal IPN28_05410 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD IPN28_05410 IPR004393 Nicotinate-nucleotide pyrophosphorylase IPN28_05410 IPR013785 Aldolase-type TIM barrel IPN28_05410 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal IPN28_05410 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal IPN28_05410 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily IPN28_05415 IPR023066 Quinolinate synthase A, type 2 IPN28_05415 IPR036094 Quinolinate synthetase A superfamily IPN28_05415 IPR003473 Quinolinate synthetase A IPN28_05420 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal IPN28_05420 IPR003959 ATPase, AAA-type, core IPN28_05420 IPR032423 AAA C-terminal domain IPN28_05420 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_05420 IPR021886 MgsA AAA+ ATPase C-terminal IPN28_05420 IPR003593 AAA+ ATPase domain IPN28_05435 IPR003691 Putative fluoride ion transporter CrcB IPN28_05440 IPR002942 RNA-binding S4 domain IPN28_05440 IPR006145 Pseudouridine synthase, RsuA/RluA IPN28_05440 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IPN28_05440 IPR036986 RNA-binding S4 domain superfamily IPN28_05440 IPR020103 Pseudouridine synthase, catalytic domain superfamily IPN28_05465 IPR037198 MutL, C-terminal domain superfamily IPN28_05465 IPR042121 MutL, C-terminal domain, regulatory subdomain IPN28_05465 IPR014790 MutL, C-terminal, dimerisation IPN28_05465 IPR042120 MutL, C-terminal domain, dimerisation subdomain IPN28_05465 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_05465 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_05465 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms IPN28_05465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_05465 IPR013507 DNA mismatch repair protein, S5 domain 2-like IPN28_05465 IPR002099 DNA mismatch repair protein family, N-terminal IPN28_05465 IPR020667 DNA mismatch repair protein, MutL IPN28_05465 IPR014762 DNA mismatch repair, conserved site IPN28_05475 IPR001672 Phosphoglucose isomerase (PGI) IPN28_05475 IPR023096 Phosphoglucose isomerase, C-terminal IPN28_05475 IPR018189 Phosphoglucose isomerase, conserved site IPN28_05475 IPR035476 Phosphoglucose isomerase, SIS domain 1 IPN28_05475 IPR035482 Phosphoglucose isomerase, SIS domain 2 IPN28_05480 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IPN28_05480 IPR007863 Peptidase M16, C-terminal IPN28_05485 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like IPN28_05485 IPR001431 Peptidase M16, zinc-binding site IPN28_05485 IPR011765 Peptidase M16, N-terminal IPN28_05485 IPR007863 Peptidase M16, C-terminal IPN28_05495 IPR001872 Peptidase A8, signal peptidase II IPN28_05510 IPR036237 Xylose isomerase-like superfamily IPN28_05510 IPR007801 Uncharacterised protein family UPF0276 IPN28_05520 IPR023468 Riboflavin kinase IPN28_05520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_05520 IPR023465 Riboflavin kinase domain superfamily IPN28_05520 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic IPN28_05520 IPR002606 Riboflavin kinase, bacterial IPN28_05520 IPR015864 FAD synthetase IPN28_05535 IPR002300 Aminoacyl-tRNA synthetase, class Ia IPN28_05535 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPN28_05535 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IPN28_05535 IPR002301 Isoleucine-tRNA ligase IPN28_05535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_05535 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IPN28_05535 IPR023585 Isoleucine-tRNA ligase, type 1 IPN28_05535 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain IPN28_05535 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPN28_05545 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily IPN28_05545 IPR002569 Peptide methionine sulphoxide reductase MsrA IPN28_05550 IPR036365 PGBD-like superfamily IPN28_05550 IPR036366 PGBD superfamily IPN28_05550 IPR002502 N-acetylmuramoyl-L-alanine amidase domain IPN28_05550 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily IPN28_05560 IPR038619 MraZ superfamily IPN28_05560 IPR007159 SpoVT-AbrB domain IPN28_05560 IPR035644 MraZ, C-terminal IPN28_05560 IPR020603 MraZ domain IPN28_05560 IPR035642 MraZ, N-terminal IPN28_05560 IPR003444 Transcriptional regulator MraZ IPN28_05560 IPR037914 SpoVT-AbrB domain superfamily IPN28_05565 IPR002903 Ribosomal RNA small subunit methyltransferase H IPN28_05565 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily IPN28_05565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_05575 IPR012338 Beta-lactamase/transpeptidase-like IPN28_05575 IPR005311 Penicillin-binding protein, dimerisation domain IPN28_05575 IPR036138 Penicillin-binding protein, dimerisation domain superfamily IPN28_05575 IPR001460 Penicillin-binding protein, transpeptidase IPN28_05580 IPR036615 Mur ligase, C-terminal domain superfamily IPN28_05580 IPR004101 Mur ligase, C-terminal IPN28_05580 IPR036565 Mur-like, catalytic domain superfamily IPN28_05580 IPR013221 Mur ligase, central IPN28_05580 IPR000713 Mur ligase, N-terminal catalytic domain IPN28_05580 IPR035911 MurE/MurF, N-terminal IPN28_05580 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase IPN28_05590 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site IPN28_05590 IPR000715 Glycosyl transferase, family 4 IPN28_05590 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase IPN28_05595 IPR036565 Mur-like, catalytic domain superfamily IPN28_05595 IPR036615 Mur ligase, C-terminal domain superfamily IPN28_05595 IPR013221 Mur ligase, central IPN28_05595 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase IPN28_05600 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IPN28_05600 IPR013437 Probable peptidoglycan glycosyltransferase FtsW IPN28_05605 IPR007235 Glycosyl transferase, family 28, C-terminal IPN28_05605 IPR006009 N-acetylglucosaminyltransferase, MurG IPN28_05605 IPR004276 Glycosyltransferase family 28, N-terminal domain IPN28_05610 IPR036615 Mur ligase, C-terminal domain superfamily IPN28_05610 IPR036565 Mur-like, catalytic domain superfamily IPN28_05610 IPR000713 Mur ligase, N-terminal catalytic domain IPN28_05610 IPR013221 Mur ligase, central IPN28_05610 IPR004101 Mur ligase, C-terminal IPN28_05610 IPR005758 UDP-N-acetylmuramate--L-alanine ligase IPN28_05620 IPR016166 FAD-binding domain, PCMH-type IPN28_05620 IPR036318 FAD-binding, type PCMH-like superfamily IPN28_05620 IPR016167 FAD-binding, type PCMH, subdomain 1 IPN28_05620 IPR016169 FAD-binding, type PCMH, subdomain 2 IPN28_05620 IPR006094 FAD linked oxidase, N-terminal IPN28_05620 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal IPN28_05620 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase IPN28_05620 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily IPN28_05635 IPR036615 Mur ligase, C-terminal domain superfamily IPN28_05635 IPR000713 Mur ligase, N-terminal catalytic domain IPN28_05635 IPR035911 MurE/MurF, N-terminal IPN28_05635 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase IPN28_05635 IPR036565 Mur-like, catalytic domain superfamily IPN28_05635 IPR004101 Mur ligase, C-terminal IPN28_05635 IPR013221 Mur ligase, central IPN28_05640 IPR029058 Alpha/Beta hydrolase fold IPN28_05640 IPR000073 Alpha/beta hydrolase fold-1 IPN28_05640 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase IPN28_05645 IPR005905 D-alanine--D-alanine ligase IPN28_05645 IPR011127 D-alanine--D-alanine ligase, N-terminal domain IPN28_05645 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site IPN28_05645 IPR013815 ATP-grasp fold, subdomain 1 IPN28_05645 IPR011761 ATP-grasp fold IPN28_05645 IPR011095 D-alanine--D-alanine ligase, C-terminal IPN28_05645 IPR016185 Pre-ATP-grasp domain superfamily IPN28_05650 IPR034746 POTRA domain IPN28_05650 IPR026579 Cell division protein FtsQ IPN28_05650 IPR005548 Cell division protein FtsQ/DivIB IPN28_05650 IPR013685 POTRA domain, FtsQ-type IPN28_05655 IPR020823 Cell division protein FtsA IPN28_05655 IPR003494 SHS2 domain inserted in FtsA IPN28_05665 IPR000158 Cell division protein FtsZ IPN28_05665 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPN28_05665 IPR020805 Cell division protein FtsZ, conserved site IPN28_05665 IPR008280 Tubulin/FtsZ, C-terminal IPN28_05665 IPR003008 Tubulin/FtsZ, GTPase domain IPN28_05665 IPR017975 Tubulin, conserved site IPN28_05665 IPR036525 Tubulin/FtsZ, GTPase domain superfamily IPN28_05665 IPR024757 Cell division protein FtsZ, C-terminal IPN28_05665 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily IPN28_05670 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_05670 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase IPN28_05670 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal IPN28_05670 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal IPN28_05675 IPR013026 Tetratricopeptide repeat-containing domain IPN28_05675 IPR011990 Tetratricopeptide-like helical domain superfamily IPN28_05675 IPR019734 Tetratricopeptide repeat IPN28_05675 IPR017689 Outer membrane protein assembly factor BamD IPN28_05675 IPR039565 Outer membrane lipoprotein BamD-like IPN28_05680 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_05680 IPR003395 RecF/RecN/SMC, N-terminal IPN28_05680 IPR004604 DNA recombination/repair protein RecN IPN28_05695 IPR012340 Nucleic acid-binding, OB-fold IPN28_05695 IPR013840 NAD-dependent DNA ligase, N-terminal IPN28_05695 IPR004150 NAD-dependent DNA ligase, OB-fold IPN28_05695 IPR013839 NAD-dependent DNA ligase, adenylation IPN28_05695 IPR001679 NAD-dependent DNA ligase IPN28_05695 IPR018239 NAD-dependent DNA ligase, active site IPN28_05695 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type IPN28_05695 IPR001357 BRCT domain IPN28_05695 IPR036420 BRCT domain superfamily IPN28_05695 IPR041663 DisA/LigA, helix-hairpin-helix motif IPN28_05695 IPR010994 RuvA domain 2-like IPN28_05715 IPR029035 DHS-like NAD/FAD-binding domain superfamily IPN28_05715 IPR034300 NADP transhydrogenase beta-like domain IPN28_05715 IPR012136 NADP transhydrogenase, beta subunit IPN28_05730 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal IPN28_05735 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 IPN28_05735 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 IPN28_05735 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IPN28_05735 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IPN28_05735 IPR036291 NAD(P)-binding domain superfamily IPN28_05740 IPR010130 Type I secretion outer membrane protein, TolC IPN28_05740 IPR003423 Outer membrane efflux protein IPN28_05745 IPR003593 AAA+ ATPase domain IPN28_05745 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_05745 IPR039395 Peptidase C39-like A IPN28_05745 IPR017871 ABC transporter, conserved site IPN28_05745 IPR003439 ABC transporter-like IPN28_05745 IPR010132 ATPase, type I secretion system, HlyB IPN28_05745 IPR036640 ABC transporter type 1, transmembrane domain superfamily IPN28_05745 IPR011527 ABC transporter type 1, transmembrane domain IPN28_05745 IPR039421 Type I protein exporter IPN28_05745 IPR005074 Peptidase C39, bacteriocin processing IPN28_05750 IPR006144 Secretion protein HlyD, conserved site IPN28_05750 IPR010129 Type I secretion membrane fusion protein, HlyD family IPN28_05755 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase IPN28_05755 IPR029787 Nucleotide cyclase IPN28_05765 IPR003018 GAF domain IPN28_05765 IPR000160 GGDEF domain IPN28_05765 IPR001294 Phytochrome IPN28_05765 IPR029016 GAF-like domain superfamily IPN28_05765 IPR035919 EAL domain superfamily IPN28_05765 IPR016132 Phytochrome chromophore attachment domain IPN28_05765 IPR029787 Nucleotide cyclase IPN28_05765 IPR013515 Phytochrome, central region IPN28_05765 IPR001633 EAL domain IPN28_05770 IPR035977 Ribosomal protein L36 superfamily IPN28_05770 IPR000473 Ribosomal protein L36 IPN28_05775 IPR004753 Cell shape determining protein MreB IPN28_05780 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 IPN28_05780 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 IPN28_05780 IPR007221 Rod shape-determining protein MreC IPN28_05790 IPR001460 Penicillin-binding protein, transpeptidase IPN28_05790 IPR001264 Glycosyl transferase, family 51 IPN28_05790 IPR023346 Lysozyme-like domain superfamily IPN28_05790 IPR036950 Penicillin binding protein transglycosylase domain IPN28_05790 IPR031376 Penicillin-binding protein, OB-like domain IPN28_05790 IPR012338 Beta-lactamase/transpeptidase-like IPN28_05795 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB IPN28_05795 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA IPN28_05795 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site IPN28_05805 IPR036249 Thioredoxin-like superfamily IPN28_05805 IPR004480 Monothiol glutaredoxin-related IPN28_05805 IPR014434 Monothiol glutaredoxin IPN28_05805 IPR002109 Glutaredoxin IPN28_05805 IPR033658 Glutaredoxin, PICOT-like IPN28_05830 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase IPN28_05830 IPR028923 SAICAR synthetase/ADE2, N-terminal IPN28_05830 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase IPN28_05830 IPR018236 SAICAR synthetase, conserved site IPN28_05850 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IPN28_05850 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IPN28_05850 IPR002504 NAD kinase IPN28_05850 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal IPN28_05855 IPR000836 Phosphoribosyltransferase domain IPN28_05855 IPR029057 Phosphoribosyltransferase-like IPN28_05855 IPR023031 Orotate phosphoribosyltransferase IPN28_05855 IPR004467 Orotate phosphoribosyl transferase domain IPN28_05995 IPR039448 Right handed beta helix domain IPN28_05995 IPR006633 Carbohydrate-binding/sugar hydrolysis domain IPN28_05995 IPR018511 Hemolysin-type calcium-binding conserved site IPN28_05995 IPR011049 Serralysin-like metalloprotease, C-terminal IPN28_05995 IPR012334 Pectin lyase fold IPN28_05995 IPR001343 RTX calcium-binding nonapeptide repeat IPN28_05995 IPR011050 Pectin lyase fold/virulence factor IPN28_05995 IPR024535 Pectate lyase superfamily protein IPN28_05995 IPR006626 Parallel beta-helix repeat IPN28_06075 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site IPN28_06075 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type IPN28_06075 IPR024084 Isopropylmalate dehydrogenase-like domain IPN28_06075 IPR040978 Hypothetical protein TT1725 IPN28_06085 IPR036291 NAD(P)-binding domain superfamily IPN28_06085 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase IPN28_06085 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IPN28_06085 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site IPN28_06085 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IPN28_06090 IPR003425 CCB3/YggT IPN28_06100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_06100 IPR011821 O-succinylhomoserine (thiol)-lyase IPN28_06100 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_06100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_06100 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IPN28_06110 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IPN28_06110 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IPN28_06110 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain IPN28_06110 IPR006249 Aconitase/Iron-responsive element-binding protein 2 IPN28_06110 IPR018136 Aconitase family, 4Fe-4S cluster binding site IPN28_06110 IPR036008 Aconitase, iron-sulfur domain IPN28_06110 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain IPN28_06160 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_06160 IPR002938 FAD-binding domain IPN28_06175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_06175 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase IPN28_06175 IPR007848 Methyltransferase small domain IPN28_06175 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPN28_06175 IPR004556 Methyltransferase HemK-like IPN28_06190 IPR006297 Elongation factor 4 IPN28_06190 IPR000795 Transcription factor, GTP-binding domain IPN28_06190 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06190 IPR038363 LepA, C-terminal domain superfamily IPN28_06190 IPR013842 GTP-binding protein LepA, C-terminal IPN28_06190 IPR035654 Elongation factor 4, domain IV IPN28_06190 IPR004161 Translation elongation factor EFTu-like, domain 2 IPN28_06190 IPR031157 Tr-type G domain, conserved site IPN28_06190 IPR005225 Small GTP-binding protein domain IPN28_06190 IPR000640 Elongation factor EFG, domain V-like IPN28_06190 IPR035647 EF-G domain III/V-like IPN28_06230 IPR011607 Methylglyoxal synthase-like domain IPN28_06230 IPR036914 Methylglyoxal synthase-like domain superfamily IPN28_06230 IPR002695 Bifunctional purine biosynthesis protein PurH-like IPN28_06230 IPR024051 AICAR transformylase, duplicated domain superfamily IPN28_06230 IPR016193 Cytidine deaminase-like IPN28_06235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_06235 IPR000780 MCP methyltransferase, CheR-type IPN28_06235 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal IPN28_06235 IPR026024 Chemotaxis protein methyltransferase CheR IPN28_06235 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily IPN28_06235 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal IPN28_06240 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type IPN28_06240 IPR011006 CheY-like superfamily IPN28_06240 IPR035909 Methylesterase CheB, C-terminal IPN28_06240 IPR001789 Signal transduction response regulator, receiver domain IPN28_06240 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase IPN28_06245 IPR001789 Signal transduction response regulator, receiver domain IPN28_06245 IPR016032 Signal transduction response regulator, C-terminal effector IPN28_06245 IPR011006 CheY-like superfamily IPN28_06245 IPR014879 Sporulation initiation factor Spo0A, C-terminal IPN28_06245 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_06245 IPR012052 Sporulation transcription factor Spo0A IPN28_06255 IPR005467 Histidine kinase domain IPN28_06255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_06255 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_06255 IPR004105 Histidine kinase CheA-like, homodimeric domain IPN28_06255 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily IPN28_06255 IPR036061 CheW-like domain superfamily IPN28_06255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_06255 IPR002545 CheW-like domain IPN28_06255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_06255 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IPN28_06255 IPR001789 Signal transduction response regulator, receiver domain IPN28_06255 IPR011006 CheY-like superfamily IPN28_06255 IPR036641 HPT domain superfamily IPN28_06260 IPR018762 Histidine phosphotransferase ChpT, C-terminal IPN28_06260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_06265 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IPN28_06265 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IPN28_06265 IPR005843 Alpha-D-phosphohexomutase, C-terminal IPN28_06265 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IPN28_06265 IPR016066 Alpha-D-phosphohexomutase, conserved site IPN28_06265 IPR005841 Alpha-D-phosphohexomutase superfamily IPN28_06265 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IPN28_06265 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IPN28_06270 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_06270 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type IPN28_06270 IPR005835 Nucleotidyl transferase domain IPN28_06285 IPR000994 Peptidase M24 IPN28_06285 IPR000587 Creatinase, N-terminal IPN28_06285 IPR036005 Creatinase/aminopeptidase-like IPN28_06285 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal IPN28_06285 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site IPN28_06295 IPR001911 Ribosomal protein S21 IPN28_06295 IPR018278 Ribosomal protein S21, conserved site IPN28_06295 IPR038380 Ribosomal protein S21 superfamily IPN28_06305 IPR003593 AAA+ ATPase domain IPN28_06305 IPR003439 ABC transporter-like IPN28_06305 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06305 IPR017871 ABC transporter, conserved site IPN28_06305 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal IPN28_06325 IPR022761 Fumarate lyase, N-terminal IPN28_06325 IPR024083 Fumarase/histidase, N-terminal IPN28_06325 IPR020557 Fumarate lyase, conserved site IPN28_06325 IPR000362 Fumarate lyase family IPN28_06325 IPR008948 L-Aspartase-like IPN28_06325 IPR009049 Argininosuccinate lyase IPN28_06325 IPR029419 Argininosuccinate lyase, C-terminal IPN28_06340 IPR009081 Phosphopantetheine binding ACP domain IPN28_06340 IPR006162 Phosphopantetheine attachment site IPN28_06340 IPR036736 ACP-like superfamily IPN28_06340 IPR003231 Acyl carrier protein (ACP) IPN28_06345 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body IPN28_06345 IPR023434 Argininosuccinate synthase, type 1 subfamily IPN28_06345 IPR001518 Argininosuccinate synthase IPN28_06345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_06345 IPR018223 Argininosuccinate synthase, conserved site IPN28_06355 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding IPN28_06355 IPR024904 Ornithine carbamoyltransferase IPN28_06355 IPR002292 Ornithine/putrescine carbamoyltransferase IPN28_06355 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain IPN28_06355 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily IPN28_06355 IPR006130 Aspartate/ornithine carbamoyltransferase IPN28_06365 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_06365 IPR005814 Aminotransferase class-III IPN28_06365 IPR004636 Acetylornithine/Succinylornithine transaminase family IPN28_06365 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_06365 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_06380 IPR041727 N-Acetyl-L-glutamate kinase, cyclic IPN28_06380 IPR001057 Glutamate/acetylglutamate kinase IPN28_06380 IPR001048 Aspartate/glutamate/uridylate kinase IPN28_06380 IPR037528 Acetylglutamate kinase ArgB IPN28_06380 IPR004662 Acetylglutamate kinase family IPN28_06380 IPR036393 Acetylglutamate kinase-like superfamily IPN28_06385 IPR001233 tRNA-splicing ligase, RtcB IPN28_06385 IPR036025 tRNA-splicing ligase RtcB-like superfamily IPN28_06390 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site IPN28_06390 IPR012280 Semialdehyde dehydrogenase, dimerisation domain IPN28_06390 IPR000534 Semialdehyde dehydrogenase, NAD-binding IPN28_06390 IPR036291 NAD(P)-binding domain superfamily IPN28_06390 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 IPN28_06400 IPR002933 Peptidase M20 IPN28_06400 IPR017439 Amidohydrolase IPN28_06400 IPR036264 Bacterial exopeptidase dimerisation domain IPN28_06400 IPR011650 Peptidase M20, dimerisation domain IPN28_06405 IPR025966 Oligopeptide transport permease C-like, N-terminal domain IPN28_06405 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPN28_06405 IPR035906 MetI-like superfamily IPN28_06415 IPR035906 MetI-like superfamily IPN28_06415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like IPN28_06425 IPR013078 Histidine phosphatase superfamily, clade-1 IPN28_06425 IPR029033 Histidine phosphatase superfamily IPN28_06425 IPR005952 Phosphoglycerate mutase 1 IPN28_06425 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site IPN28_06430 IPR003329 Acylneuraminate cytidylyltransferase IPN28_06430 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase IPN28_06430 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_06435 IPR039424 Solute-binding protein family 5 IPN28_06435 IPR030678 Peptide/nickel binding protein, MppA-type IPN28_06435 IPR000914 Solute-binding protein family 5 domain IPN28_06440 IPR001633 EAL domain IPN28_06440 IPR035919 EAL domain superfamily IPN28_06445 IPR013785 Aldolase-type TIM barrel IPN28_06445 IPR001295 Dihydroorotate dehydrogenase, conserved site IPN28_06445 IPR005719 Dihydroorotate dehydrogenase, class 2 IPN28_06445 IPR005720 Dihydroorotate dehydrogenase domain IPN28_06450 IPR000462 CDP-alcohol phosphatidyltransferase IPN28_06450 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase IPN28_06475 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_06475 IPR011006 CheY-like superfamily IPN28_06475 IPR001867 OmpR/PhoB-type DNA-binding domain IPN28_06475 IPR001789 Signal transduction response regulator, receiver domain IPN28_06475 IPR039420 Transcriptional regulatory protein WalR-like IPN28_06480 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPN28_06480 IPR040627 T3SS EscN ATPase, C-terminal IPN28_06480 IPR003593 AAA+ ATPase domain IPN28_06480 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IPN28_06480 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPN28_06480 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06480 IPR032463 ATPase, type III secretion system, FliI IPN28_06480 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 IPN28_06480 IPR005714 ATPase, type III secretion system, FliI/YscN IPN28_06510 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 IPN28_06510 IPR025501 ATP binding protein MinD IPN28_06510 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06515 IPR020006 Flagellar biosynthesis protein FlhF IPN28_06515 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06515 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IPN28_06515 IPR020006 Flagellar biosynthesis protein FlhF IPN28_06515 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06515 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IPN28_06525 IPR006301 Flagellar biosynthesis protein FlhA IPN28_06525 IPR042196 FHIPEP, domain 4 IPN28_06525 IPR042194 FHIPEP, domain 1 IPN28_06525 IPR042193 FHIPEP, domain 3 IPN28_06525 IPR025505 FHIPEP conserved site IPN28_06525 IPR001712 Type III secretion system FHIPEP IPN28_06535 IPR011006 CheY-like superfamily IPN28_06535 IPR025944 Sigma-54 interaction domain, conserved site IPN28_06535 IPR003593 AAA+ ATPase domain IPN28_06535 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPN28_06535 IPR002078 RNA polymerase sigma factor 54 interaction domain IPN28_06535 IPR001789 Signal transduction response regulator, receiver domain IPN28_06535 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPN28_06535 IPR002197 DNA binding HTH domain, Fis-type IPN28_06535 IPR009057 Homeobox-like domain superfamily IPN28_06535 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06535 IPR029995 Transcriptional activator SfnR/FlbD IPN28_06545 IPR002898 MotA/TolQ/ExbB proton channel IPN28_06545 IPR000540 Flagellar motor protein MotA, conserved site IPN28_06550 IPR012826 Flagellar motor switch FliN IPN28_06550 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb IPN28_06550 IPR001543 Surface presentation of antigen (SpoA) IPN28_06550 IPR036429 SpoA-like superfamily IPN28_06560 IPR000090 Flagellar motor switch protein FliG IPN28_06560 IPR011002 Flagellar motor switch protein FliG, alpha-helical IPN28_06560 IPR028263 Flagellar motor switch protein FliG, N-terminal domain IPN28_06560 IPR032779 Flagellar motor switch protein FliG, middle domain IPN28_06560 IPR023087 Flagellar motor switch protein FliG, C-terminal IPN28_06565 IPR000067 Flagellar M-ring protein FliF IPN28_06565 IPR013556 Flagellar M-ring C-terminal IPN28_06565 IPR006182 Secretory protein YscJ/FliF IPN28_06585 IPR009967 Flagellum biosynthesis repressor FlbT IPN28_06595 IPR014122 Demethylmenaquinone methyltransferase IPN28_06595 IPR004033 UbiE/COQ5 methyltransferase IPN28_06595 IPR023576 UbiE/COQ5 methyltransferase, conserved site IPN28_06595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_06610 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IPN28_06610 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IPN28_06610 IPR020013 Flagellar hook-basal body protein, FlgE/F/G IPN28_06610 IPR019776 Flagellar basal body rod protein, conserved site IPN28_06610 IPR001444 Flagellar basal body rod protein, N-terminal IPN28_06610 IPR037058 Flagellar hook protein FlgE superfamily IPN28_06610 IPR011491 Flagellar hook protein FlgE IPN28_06615 IPR005648 Flagellar hook capping protein IPN28_06640 IPR001782 Flagellar P-ring protein IPN28_06645 IPR019704 Flagellar assembly regulator FliX, class II IPN28_06650 IPR012784 RNA polymerase-binding transcription factor DksA IPN28_06650 IPR037187 DksA, N-terminal domain superfamily IPN28_06650 IPR000962 Zinc finger, DksA/TraR C4-type IPN28_06650 IPR020458 Zinc finger, DksA/TraR C4-type conserved site IPN28_06655 IPR000527 Flagellar L-ring protein IPN28_06665 IPR001444 Flagellar basal body rod protein, N-terminal IPN28_06665 IPR012834 Flagellar basal-body rod FlgG IPN28_06665 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IPN28_06665 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IPN28_06665 IPR020013 Flagellar hook-basal body protein, FlgE/F/G IPN28_06665 IPR019776 Flagellar basal body rod protein, conserved site IPN28_06670 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like IPN28_06670 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IPN28_06670 IPR020013 Flagellar hook-basal body protein, FlgE/F/G IPN28_06670 IPR019776 Flagellar basal body rod protein, conserved site IPN28_06670 IPR001444 Flagellar basal body rod protein, N-terminal IPN28_06670 IPR012836 Flagellar basal-body rod FlgF IPN28_06680 IPR001543 Surface presentation of antigen (SpoA) IPN28_06680 IPR001689 Flagellar motor switch protein FliM IPN28_06680 IPR028976 CheC-like superfamily IPN28_06680 IPR036429 SpoA-like superfamily IPN28_06695 IPR011006 CheY-like superfamily IPN28_06695 IPR001789 Signal transduction response regulator, receiver domain IPN28_06710 IPR025713 Motility protein B, N-terminal domain IPN28_06710 IPR036737 OmpA-like domain superfamily IPN28_06710 IPR006665 OmpA-like domain IPN28_06720 IPR005838 Type III secretion system inner membrane P protein IPN28_06720 IPR005837 Flagellar transport protein FliP IPN28_06740 IPR006135 Type III secretion system substrate exporter IPN28_06740 IPR029025 Type III secretion system substrate exporter, C-terminal IPN28_06740 IPR006136 Flagellar biosynthetic protein FlhB IPN28_06745 IPR001444 Flagellar basal body rod protein, N-terminal IPN28_06745 IPR019776 Flagellar basal body rod protein, conserved site IPN28_06745 IPR006300 Flagellar basal-body rod protein FlgB IPN28_06750 IPR019776 Flagellar basal body rod protein, conserved site IPN28_06750 IPR010930 Flagellar basal-body/hook protein, C-terminal domain IPN28_06750 IPR006299 Flagellar basal-body rod protein FlgC IPN28_06755 IPR001624 Flagellar hook-basal body complex protein FliE IPN28_06770 IPR006305 Flagellar biosynthesis protein FliQ IPN28_06770 IPR002191 Bacterial export protein family 3 IPN28_06775 IPR002010 Type III secretion system inner membrane R protein IPN28_06775 IPR006303 Flagellar biosynthesis protein FliR IPN28_06780 IPR029025 Type III secretion system substrate exporter, C-terminal IPN28_06780 IPR006135 Type III secretion system substrate exporter IPN28_06780 IPR006136 Flagellar biosynthetic protein FlhB IPN28_06785 IPR013656 PAS fold-4 IPN28_06785 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_06785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_06785 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_06785 IPR000014 PAS domain IPN28_06785 IPR001789 Signal transduction response regulator, receiver domain IPN28_06785 IPR035965 PAS domain superfamily IPN28_06785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_06785 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_06785 IPR011006 CheY-like superfamily IPN28_06785 IPR005467 Histidine kinase domain IPN28_06790 IPR003593 AAA+ ATPase domain IPN28_06790 IPR013765 DNA recombination and repair protein RecA IPN28_06790 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06790 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain IPN28_06790 IPR023400 DNA recombination and repair protein RecA, C-terminal IPN28_06790 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface IPN28_06790 IPR020584 DNA recombination/repair protein RecA, conserved site IPN28_06800 IPR023620 Small protein B IPN28_06800 IPR000037 SsrA-binding protein IPN28_06800 IPR020081 SsrA-binding protein, conserved site IPN28_06805 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA IPN28_06805 IPR020625 Schiff base-forming aldolase, active site IPN28_06805 IPR020624 Schiff base-forming aldolase, conserved site IPN28_06805 IPR002220 DapA-like IPN28_06805 IPR013785 Aldolase-type TIM barrel IPN28_06810 IPR008258 Transglycosylase SLT domain 1 IPN28_06810 IPR000189 Prokaryotic transglycosylase, active site IPN28_06810 IPR023346 Lysozyme-like domain superfamily IPN28_06810 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily IPN28_06810 IPR008939 Lytic transglycosylase, superhelical U-shaped IPN28_06810 IPR012289 Lytic transglycosylase, superhelical linker IPN28_06815 IPR011006 CheY-like superfamily IPN28_06815 IPR000792 Transcription regulator LuxR, C-terminal IPN28_06815 IPR001789 Signal transduction response regulator, receiver domain IPN28_06815 IPR016032 Signal transduction response regulator, C-terminal effector IPN28_06820 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_06820 IPR013656 PAS fold-4 IPN28_06820 IPR035965 PAS domain superfamily IPN28_06820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_06820 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_06820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_06820 IPR005467 Histidine kinase domain IPN28_06820 IPR000014 PAS domain IPN28_06820 IPR011006 CheY-like superfamily IPN28_06820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_06820 IPR001789 Signal transduction response regulator, receiver domain IPN28_06850 IPR041628 ChlI/MoxR, AAA lid domain IPN28_06850 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06850 IPR011703 ATPase, AAA-3 IPN28_06860 IPR002646 Poly A polymerase, head domain IPN28_06860 IPR023068 CCA-adding enzyme, firmicutes IPN28_06860 IPR032810 CCA-adding enzyme, C-terminal IPN28_06860 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain IPN28_06870 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily IPN28_06870 IPR018375 Coproporphyrinogen III oxidase, conserved site IPN28_06870 IPR001260 Coproporphyrinogen III oxidase, aerobic IPN28_06875 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPN28_06875 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase IPN28_06875 IPR001537 tRNA/rRNA methyltransferase, SpoU type IPN28_06875 IPR029028 Alpha/beta knot methyltransferases IPN28_06880 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal IPN28_06880 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal IPN28_06880 IPR017941 Rieske [2Fe-2S] iron-sulphur domain IPN28_06880 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily IPN28_06880 IPR014349 Rieske iron-sulphur protein IPN28_06880 IPR005805 Rieske iron-sulphur protein, C-terminal IPN28_06880 IPR006311 Twin-arginine translocation pathway, signal sequence IPN28_06880 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit IPN28_06885 IPR027387 Cytochrome b/b6-like domain superfamily IPN28_06885 IPR005798 Cytochrome b/b6, C-terminal IPN28_06885 IPR005797 Cytochrome b/b6, N-terminal IPN28_06885 IPR030689 Cytochrome b IPN28_06885 IPR016174 Di-haem cytochrome, transmembrane IPN28_06885 IPR036150 Cytochrome b/b6, C-terminal domain superfamily IPN28_06890 IPR005798 Cytochrome b/b6, C-terminal IPN28_06890 IPR016174 Di-haem cytochrome, transmembrane IPN28_06890 IPR036150 Cytochrome b/b6, C-terminal domain superfamily IPN28_06890 IPR027387 Cytochrome b/b6-like domain superfamily IPN28_06890 IPR002326 Cytochrome c1 IPN28_06890 IPR036909 Cytochrome c-like domain superfamily IPN28_06890 IPR005797 Cytochrome b/b6, N-terminal IPN28_06890 IPR009056 Cytochrome c-like domain IPN28_06915 IPR015875 IMP dehydrogenase / GMP reductase, conserved site IPN28_06915 IPR001093 IMP dehydrogenase/GMP reductase IPN28_06915 IPR005993 GMP reductase IPN28_06915 IPR013785 Aldolase-type TIM barrel IPN28_06925 IPR001279 Metallo-beta-lactamase IPN28_06925 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain IPN28_06925 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain IPN28_06925 IPR017782 Hydroxyacylglutathione hydrolase IPN28_06925 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPN28_06930 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC IPN28_06930 IPR013216 Methyltransferase type 11 IPN28_06930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_06940 IPR005222 Competence protein ComF IPN28_06940 IPR000836 Phosphoribosyltransferase domain IPN28_06940 IPR029057 Phosphoribosyltransferase-like IPN28_06945 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 IPN28_06945 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site IPN28_06945 IPR002938 FAD-binding domain IPN28_06945 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_06950 IPR002109 Glutaredoxin IPN28_06950 IPR014025 Glutaredoxin subgroup IPN28_06950 IPR011900 Glutaredoxin, GrxC IPN28_06950 IPR036249 Thioredoxin-like superfamily IPN28_06950 IPR011767 Glutaredoxin active site IPN28_06955 IPR036526 Carbon-nitrogen hydrolase superfamily IPN28_06955 IPR003010 Carbon-nitrogen hydrolase IPN28_06955 IPR001110 Uncharacterised protein family UPF0012, conserved site IPN28_06960 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_06960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_06960 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme IPN28_06960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_06960 IPR006233 Cystathionine beta-lyase, bacterial IPN28_06965 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_06965 IPR033186 Helicase HerA-like C-terminal IPN28_06970 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPN28_06970 IPR001387 Cro/C1-type helix-turn-helix domain IPN28_06980 IPR029058 Alpha/Beta hydrolase fold IPN28_06980 IPR003140 Phospholipase/carboxylesterase/thioesterase IPN28_06995 IPR022920 Disulphide bond formation protein DsbB IPN28_06995 IPR023380 DsbB-like superfamily IPN28_06995 IPR003752 Disulphide bond formation protein DsbB/BdbC IPN28_07010 IPR013785 Aldolase-type TIM barrel IPN28_07010 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_07010 IPR023753 FAD/NAD(P)-binding domain IPN28_07010 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal IPN28_07025 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily IPN28_07025 IPR006037 Regulator of K+ conductance, C-terminal IPN28_07025 IPR031312 Sodium/sulphate symporter, conserved site IPN28_07025 IPR004680 Citrate transporter-like domain IPN28_07030 IPR030489 Transcription regulator Rrf2-type, conserved site IPN28_07030 IPR000944 Transcription regulator Rrf2-type IPN28_07030 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_07030 IPR036390 Winged helix DNA-binding domain superfamily IPN28_07055 IPR002656 Acyltransferase 3 IPN28_07055 IPR036514 SGNH hydrolase superfamily IPN28_07060 IPR022801 Ribosomal protein S4/S9 IPN28_07060 IPR001912 Ribosomal protein S4/S9, N-terminal IPN28_07060 IPR018079 Ribosomal protein S4, conserved site IPN28_07060 IPR005709 Ribosomal protein S4, bacterial-type IPN28_07060 IPR036986 RNA-binding S4 domain superfamily IPN28_07060 IPR002942 RNA-binding S4 domain IPN28_07065 IPR001537 tRNA/rRNA methyltransferase, SpoU type IPN28_07065 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPN28_07065 IPR004384 RNA methyltransferase TrmJ/LasT IPN28_07065 IPR029028 Alpha/beta knot methyltransferases IPN28_07085 IPR000924 Glutamyl/glutaminyl-tRNA synthetase IPN28_07085 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial IPN28_07085 IPR033910 Glutamyl-tRNA synthetase IPN28_07085 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 IPN28_07085 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain IPN28_07085 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPN28_07085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_07085 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding IPN28_07090 IPR003010 Carbon-nitrogen hydrolase IPN28_07090 IPR003694 NAD(+) synthetase IPN28_07090 IPR022310 NAD/GMP synthase IPN28_07090 IPR014445 Glutamine-dependent NAD(+) synthetase IPN28_07090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_07090 IPR036526 Carbon-nitrogen hydrolase superfamily IPN28_07095 IPR013785 Aldolase-type TIM barrel IPN28_07095 IPR002480 DAHP synthetase, class II IPN28_07110 IPR003758 Tetraacyldisaccharide 4'-kinase IPN28_07110 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_07115 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily IPN28_07115 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal IPN28_07115 IPR039901 3-deoxy-D-manno-octulosonic acid transferase IPN28_07150 IPR023485 Phosphotyrosine protein phosphatase I IPN28_07150 IPR017867 Protein-tyrosine phosphatase, low molecular weight IPN28_07150 IPR036196 Phosphotyrosine protein phosphatase I superfamily IPN28_07165 IPR001763 Rhodanese-like domain IPN28_07165 IPR036873 Rhodanese-like domain superfamily IPN28_07165 IPR035985 Ubiquitin-activating enzyme IPN28_07165 IPR000594 THIF-type NAD/FAD binding fold IPN28_07185 IPR041102 UvrA, interaction domain IPN28_07185 IPR041552 UvrA DNA-binding domain IPN28_07185 IPR004602 UvrABC system subunit A IPN28_07185 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_07185 IPR017871 ABC transporter, conserved site IPN28_07185 IPR003439 ABC transporter-like IPN28_07200 IPR000424 Primosome PriB/single-strand DNA-binding IPN28_07200 IPR012340 Nucleic acid-binding, OB-fold IPN28_07200 IPR011344 Single-stranded DNA-binding protein IPN28_07210 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta IPN28_07210 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal IPN28_07210 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IPN28_07210 IPR005743 DNA gyrase, subunit A IPN28_07210 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IPN28_07210 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily IPN28_07210 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat IPN28_07220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_07220 IPR001980 Phosphopantetheine adenylyltransferase IPN28_07220 IPR004821 Cytidyltransferase-like domain IPN28_07240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_07240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_07240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_07240 IPR005467 Histidine kinase domain IPN28_07240 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_07240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_07245 IPR001789 Signal transduction response regulator, receiver domain IPN28_07245 IPR001867 OmpR/PhoB-type DNA-binding domain IPN28_07245 IPR016032 Signal transduction response regulator, C-terminal effector IPN28_07245 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_07245 IPR011006 CheY-like superfamily IPN28_07245 IPR039420 Transcriptional regulatory protein WalR-like IPN28_07265 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site IPN28_07265 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase IPN28_07265 IPR029787 Nucleotide cyclase IPN28_07270 IPR002514 Transposase IS3/IS911family IPN28_07270 IPR009057 Homeobox-like domain superfamily IPN28_07280 IPR042122 Serine acetyltransferase, N-terminal domain superfamily IPN28_07280 IPR001451 Hexapeptide repeat IPN28_07280 IPR018357 Hexapeptide transferase, conserved site IPN28_07280 IPR011004 Trimeric LpxA-like superfamily IPN28_07280 IPR005881 Serine O-acetyltransferase IPN28_07290 IPR033454 RecG, wedge domain IPN28_07290 IPR001650 Helicase, C-terminal IPN28_07290 IPR012340 Nucleic acid-binding, OB-fold IPN28_07290 IPR011545 DEAD/DEAH box helicase domain IPN28_07290 IPR004609 ATP-dependent DNA helicase RecG IPN28_07290 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_07290 IPR014001 Helicase superfamily 1/2, ATP-binding domain IPN28_07305 IPR005631 Flavinator of succinate dehydrogenase IPN28_07305 IPR036714 Flavinator of succinate dehydrogenase superfamily IPN28_07310 IPR014014 RNA helicase, DEAD-box type, Q motif IPN28_07310 IPR014001 Helicase superfamily 1/2, ATP-binding domain IPN28_07310 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IPN28_07310 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_07310 IPR001650 Helicase, C-terminal IPN28_07310 IPR030880 DEAD-box ATP-dependent RNA helicase CshA IPN28_07310 IPR011545 DEAD/DEAH box helicase domain IPN28_07315 IPR019844 Cold-shock (CSD) domain IPN28_07315 IPR012156 Cold shock, CspA IPN28_07315 IPR002059 Cold-shock protein, DNA-binding IPN28_07315 IPR011129 Cold shock domain IPN28_07315 IPR012340 Nucleic acid-binding, OB-fold IPN28_07335 IPR036101 CarD-like/TRCF domain superfamily IPN28_07335 IPR003711 CarD-like/TRCF domain IPN28_07335 IPR011545 DEAD/DEAH box helicase domain IPN28_07335 IPR014001 Helicase superfamily 1/2, ATP-binding domain IPN28_07335 IPR001650 Helicase, C-terminal IPN28_07335 IPR004576 Transcription-repair coupling factor IPN28_07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_07335 IPR037235 TRCF-like, C-terminal domain IPN28_07335 IPR005118 Transcription-repair-coupling factor, C-terminal domain IPN28_07335 IPR041471 UvrB, interaction domain IPN28_07345 IPR011009 Protein kinase-like domain superfamily IPN28_07345 IPR002575 Aminoglycoside phosphotransferase IPN28_07350 IPR004839 Aminotransferase, class I/classII IPN28_07350 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IPN28_07350 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_07350 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_07350 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_07360 IPR005119 LysR, substrate-binding IPN28_07360 IPR000847 Transcription regulator HTH, LysR IPN28_07360 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_07360 IPR036390 Winged helix DNA-binding domain superfamily IPN28_07365 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site IPN28_07365 IPR023753 FAD/NAD(P)-binding domain IPN28_07365 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_07365 IPR005982 Thioredoxin reductase IPN28_07370 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain IPN28_07370 IPR019888 Transcription regulator AsnC-type IPN28_07370 IPR011008 Dimeric alpha-beta barrel IPN28_07370 IPR000485 AsnC-type HTH domain IPN28_07370 IPR011991 ArsR-like helix-turn-helix domain IPN28_07370 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_07370 IPR036390 Winged helix DNA-binding domain superfamily IPN28_07370 IPR019885 Transcription regulator HTH, AsnC-type, conserved site IPN28_07380 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related IPN28_07380 IPR020595 MnmG-related, conserved site IPN28_07380 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO IPN28_07380 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_07390 IPR036775 DNA polymerase, Y-family, little finger domain superfamily IPN28_07390 IPR017961 DNA polymerase, Y-family, little finger domain IPN28_07390 IPR022880 DNA polymerase IV IPN28_07390 IPR024728 DNA polymerase type-Y, HhH motif IPN28_07390 IPR001126 UmuC domain IPN28_07405 IPR000813 7Fe ferredoxin IPN28_07405 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPN28_07405 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPN28_07405 IPR022569 Ferredoxin, C-terminal IPN28_07410 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site IPN28_07410 IPR005856 Cysteine synthase IPN28_07410 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme IPN28_07410 IPR005859 Cysteine synthase CysK IPN28_07410 IPR001926 Pyridoxal-phosphate dependent enzyme IPN28_07420 IPR022890 Ferredoxin--NADP reductase, type 2 IPN28_07420 IPR023753 FAD/NAD(P)-binding domain IPN28_07420 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_07425 IPR000432 DNA mismatch repair protein MutS, C-terminal IPN28_07425 IPR005748 DNA mismatch repair protein MutS IPN28_07425 IPR017261 DNA mismatch repair protein MutS/MSH IPN28_07425 IPR007696 DNA mismatch repair protein MutS, core IPN28_07425 IPR016151 DNA mismatch repair protein MutS, N-terminal IPN28_07425 IPR036187 DNA mismatch repair protein MutS, core domain superfamily IPN28_07425 IPR007860 DNA mismatch repair protein MutS, connector domain IPN28_07425 IPR036678 MutS, connector domain superfamily IPN28_07425 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_07425 IPR007861 DNA mismatch repair protein MutS, clamp IPN28_07425 IPR007695 DNA mismatch repair protein MutS-like, N-terminal IPN28_07435 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal IPN28_07435 IPR036551 Flavin prenyltransferase-like IPN28_07435 IPR003382 Flavoprotein IPN28_07435 IPR035929 CoaB-like superfamily IPN28_07435 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC IPN28_07445 IPR004033 UbiE/COQ5 methyltransferase IPN28_07445 IPR023576 UbiE/COQ5 methyltransferase, conserved site IPN28_07445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_07450 IPR004268 Peptidoglycan biosynthesis protein MurJ IPN28_07455 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPN28_07455 IPR002305 Aminoacyl-tRNA synthetase, class Ic IPN28_07455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_07455 IPR002306 Tryptophan-tRNA ligase IPN28_07455 IPR024109 Tryptophan-tRNA ligase, bacterial-type IPN28_07465 IPR002781 Transmembrane protein TauE-like IPN28_07480 IPR034904 Fe-S cluster assembly domain superfamily IPN28_07480 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal IPN28_07485 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB IPN28_07485 IPR000905 Gcp-like domain IPN28_07490 IPR008807 ROSMUCR transcriptional regulator IPN28_07490 IPR041920 ROS/MUCR transcriptional regulator superfamily IPN28_07495 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain IPN28_07495 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal IPN28_07495 IPR036291 NAD(P)-binding domain superfamily IPN28_07495 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPN28_07495 IPR000304 Pyrroline-5-carboxylate reductase IPN28_07510 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt IPN28_07525 IPR005946 Ribose-phosphate pyrophosphokinase IPN28_07525 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site IPN28_07525 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain IPN28_07525 IPR000836 Phosphoribosyltransferase domain IPN28_07525 IPR029057 Phosphoribosyltransferase-like IPN28_07525 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type IPN28_07530 IPR020057 Ribosomal protein L25, beta domain IPN28_07530 IPR037121 Ribosomal protein L25, C-terminal IPN28_07530 IPR001021 Ribosomal protein L25, long-form IPN28_07530 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal IPN28_07530 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily IPN28_07530 IPR029751 Ribosomal protein L25 IPN28_07535 IPR036416 Peptidyl-tRNA hydrolase superfamily IPN28_07535 IPR018171 Peptidyl-tRNA hydrolase, conserved site IPN28_07535 IPR001328 Peptidyl-tRNA hydrolase IPN28_07540 IPR012675 Beta-grasp domain superfamily IPN28_07540 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 IPN28_07540 IPR041706 YchF, N-terminal IPN28_07540 IPR013029 YchF, C-terminal domain IPN28_07540 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_07540 IPR023192 TGS-like domain superfamily IPN28_07540 IPR012676 TGS-like IPN28_07540 IPR004095 TGS IPN28_07540 IPR006073 GTP binding domain IPN28_07540 IPR031167 OBG-type guanine nucleotide-binding (G) domain IPN28_07555 IPR001544 Aminotransferase class IV IPN28_07555 IPR036038 Aminotransferase-like, PLP-dependent enzymes IPN28_07555 IPR005785 Branched-chain amino acid aminotransferase I IPN28_07555 IPR018300 Aminotransferase, class IV, conserved site IPN28_07560 IPR011006 CheY-like superfamily IPN28_07560 IPR001867 OmpR/PhoB-type DNA-binding domain IPN28_07560 IPR016032 Signal transduction response regulator, C-terminal effector IPN28_07560 IPR001789 Signal transduction response regulator, receiver domain IPN28_07560 IPR039420 Transcriptional regulatory protein WalR-like IPN28_07560 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_07565 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_07565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_07565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_07565 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_07565 IPR005467 Histidine kinase domain IPN28_07565 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_07565 IPR003660 HAMP domain IPN28_07570 IPR002547 tRNA-binding domain IPN28_07570 IPR008231 Probable chaperone CsaA IPN28_07570 IPR012340 Nucleic acid-binding, OB-fold IPN28_07580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_07580 IPR005467 Histidine kinase domain IPN28_07580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_07580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_07580 IPR000014 PAS domain IPN28_07580 IPR035965 PAS domain superfamily IPN28_07580 IPR013767 PAS fold IPN28_07580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_07580 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_07585 IPR003783 Regulatory protein RecX IPN28_07585 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_07620 IPR007897 PHB accumulation regulatory IPN28_07620 IPR012909 PHA accumulation regulator DNA-binding, N-terminal IPN28_07620 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR IPN28_07630 IPR002155 Thiolase IPN28_07630 IPR020616 Thiolase, N-terminal IPN28_07630 IPR020613 Thiolase, conserved site IPN28_07630 IPR020617 Thiolase, C-terminal IPN28_07630 IPR016039 Thiolase-like IPN28_07630 IPR020615 Thiolase, acyl-enzyme intermediate active site IPN28_07630 IPR020610 Thiolase, active site IPN28_07635 IPR020904 Short-chain dehydrogenase/reductase, conserved site IPN28_07635 IPR002347 Short-chain dehydrogenase/reductase SDR IPN28_07635 IPR036291 NAD(P)-binding domain superfamily IPN28_07635 IPR011283 Acetoacetyl-CoA reductase IPN28_07665 IPR020557 Fumarate lyase, conserved site IPN28_07665 IPR000362 Fumarate lyase family IPN28_07665 IPR018951 Fumarase C, C-terminal IPN28_07665 IPR005677 Fumarate hydratase, class II IPN28_07665 IPR008948 L-Aspartase-like IPN28_07665 IPR022761 Fumarate lyase, N-terminal IPN28_07665 IPR024083 Fumarase/histidase, N-terminal IPN28_07670 IPR013815 ATP-grasp fold, subdomain 1 IPN28_07670 IPR016185 Pre-ATP-grasp domain superfamily IPN28_07670 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit IPN28_07670 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain IPN28_07670 IPR011054 Rudiment single hybrid motif IPN28_07670 IPR011761 ATP-grasp fold IPN28_07670 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type IPN28_07675 IPR000031 PurE domain IPN28_07675 IPR024694 PurE, prokaryotic type IPN28_07675 IPR035893 PurE domain superfamily IPN28_07675 IPR033747 Class I PurE IPN28_07685 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type IPN28_07685 IPR012829 Phosphofructokinase, mixed-substrate PFK group III IPN28_07685 IPR022953 ATP-dependent 6-phosphofructokinase IPN28_07685 IPR035966 Phosphofructokinase superfamily IPN28_07685 IPR000023 Phosphofructokinase domain IPN28_07685 IPR015912 Phosphofructokinase, conserved site IPN28_07700 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase IPN28_07700 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site IPN28_07700 IPR037237 IlvD/EDD, N-terminal domain IPN28_07700 IPR042096 Dihydroxy-acid dehydratase, C-terminal IPN28_07700 IPR004404 Dihydroxy-acid dehydratase IPN28_07705 IPR005490 L,D-transpeptidase catalytic domain IPN28_07705 IPR038063 L,D-transpeptidase catalytic domain-like IPN28_07710 IPR006311 Twin-arginine translocation pathway, signal sequence IPN28_07710 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily IPN28_07710 IPR010275 Protein of unknown function DUF882 IPN28_07715 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily IPN28_07715 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK IPN28_07720 IPR006390 Dihydropteroate synthase IPN28_07720 IPR011005 Dihydropteroate synthase-like IPN28_07720 IPR000489 Pterin-binding domain IPN28_07725 IPR023086 Phosphoglycerate mutase, GpmB, probable IPN28_07725 IPR029033 Histidine phosphatase superfamily IPN28_07725 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site IPN28_07725 IPR013078 Histidine phosphatase superfamily, clade-1 IPN28_07730 IPR020626 L-aspartate dehydrogenase, prokaryotic IPN28_07730 IPR011182 L-aspartate dehydrogenase IPN28_07730 IPR036291 NAD(P)-binding domain superfamily IPN28_07730 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding IPN28_07730 IPR002811 Aspartate dehydrogenase IPN28_07735 IPR003717 Recombination protein O, RecO IPN28_07735 IPR022572 DNA replication/recombination mediator RecO, N-terminal IPN28_07735 IPR012340 Nucleic acid-binding, OB-fold IPN28_07735 IPR037278 ARFGAP/RecO-like zinc finger IPN28_07740 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat IPN28_07740 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative IPN28_07740 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily IPN28_07740 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal IPN28_07740 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IPN28_07740 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal IPN28_07740 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta IPN28_07750 IPR025713 Motility protein B, N-terminal domain IPN28_07750 IPR006665 OmpA-like domain IPN28_07750 IPR036737 OmpA-like domain superfamily IPN28_07755 IPR000540 Flagellar motor protein MotA, conserved site IPN28_07755 IPR022522 Flagellar motor stator, MotA IPN28_07755 IPR002898 MotA/TolQ/ExbB proton channel IPN28_07760 IPR001731 Delta-aminolevulinic acid dehydratase IPN28_07760 IPR013785 Aldolase-type TIM barrel IPN28_07760 IPR030656 Delta-aminolevulinic acid dehydratase, active site IPN28_07775 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family IPN28_07775 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily IPN28_07775 IPR004785 Ribose 5-phosphate isomerase B IPN28_07780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_07780 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_07780 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_07780 IPR039429 Serine hydroxymethyltransferase-like domain IPN28_07780 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site IPN28_07780 IPR001085 Serine hydroxymethyltransferase IPN28_07790 IPR003796 Ribonucleotide reductase regulator NrdR-like IPN28_07790 IPR005144 ATP-cone domain IPN28_07795 IPR016193 Cytidine deaminase-like IPN28_07795 IPR024072 Dihydrofolate reductase-like domain superfamily IPN28_07795 IPR004794 Riboflavin biosynthesis protein RibD IPN28_07795 IPR011549 Riboflavin-specific deaminase, C-terminal IPN28_07795 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal IPN28_07795 IPR002125 Cytidine and deoxycytidylate deaminase domain IPN28_07795 IPR016192 APOBEC/CMP deaminase, zinc-binding IPN28_07800 IPR001783 Lumazine-binding protein IPN28_07800 IPR017938 Riboflavin synthase-like beta-barrel IPN28_07800 IPR026017 Lumazine-binding domain IPN28_07800 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily IPN28_07805 IPR036144 RibA-like superfamily IPN28_07805 IPR016299 Riboflavin biosynthesis protein RibBA IPN28_07805 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IPN28_07805 IPR000926 GTP cyclohydrolase II, RibA IPN28_07805 IPR032677 GTP cyclohydrolase II IPN28_07805 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB IPN28_07810 IPR034964 Lumazine synthase IPN28_07810 IPR002180 Lumazine/riboflavin synthase IPN28_07810 IPR036467 Lumazine/riboflavin synthase superfamily IPN28_07815 IPR035926 NusB-like superfamily IPN28_07815 IPR011605 NusB antitermination factor IPN28_07815 IPR006027 NusB/RsmB/TIM44 IPN28_07840 IPR018383 Uncharacterised protein family UPF0324, prokaryote IPN28_07845 IPR002677 Ribosomal protein L32p IPN28_07845 IPR011332 Zinc-binding ribosomal protein IPN28_07850 IPR012281 Phospholipid biosynthesis protein, PlsX-like IPN28_07850 IPR003664 Fatty acid synthesis PlsX protein IPN28_07855 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IPN28_07855 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal IPN28_07855 IPR016039 Thiolase-like IPN28_07855 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 IPN28_07860 IPR020816 Histone-like DNA-binding protein, conserved site IPN28_07860 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IPN28_07860 IPR005684 Integration host factor, alpha subunit IPN28_07860 IPR000119 Histone-like DNA-binding protein IPN28_07865 IPR009061 Putative DNA-binding domain superfamily IPN28_07865 IPR000551 MerR-type HTH domain IPN28_07875 IPR008535 Protein of unknown function DUF817 IPN28_07895 IPR005822 Ribosomal protein L13 IPN28_07895 IPR005823 Ribosomal protein L13, bacterial-type IPN28_07895 IPR036899 Ribosomal protein L13 superfamily IPN28_07900 IPR020574 Ribosomal protein S9, conserved site IPN28_07900 IPR023035 Ribosomal protein S9, bacterial/plastid IPN28_07900 IPR000754 Ribosomal protein S9 IPN28_07900 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_07900 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_07905 IPR011004 Trimeric LpxA-like superfamily IPN28_07905 IPR001451 Hexapeptide repeat IPN28_07915 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain IPN28_07915 IPR029058 Alpha/Beta hydrolase fold IPN28_07915 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I IPN28_07915 IPR000073 Alpha/beta hydrolase fold-1 IPN28_07925 IPR036291 NAD(P)-binding domain superfamily IPN28_07925 IPR002912 ACT domain IPN28_07925 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding IPN28_07925 IPR001342 Homoserine dehydrogenase, catalytic IPN28_07925 IPR019811 Homoserine dehydrogenase, conserved site IPN28_07925 IPR016204 Homoserine dehydrogenase IPN28_07930 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase IPN28_07935 IPR003156 DHHA1 domain IPN28_07935 IPR041122 RecJ, OB domain IPN28_07935 IPR038763 DHH phosphoesterase superfamily IPN28_07935 IPR004610 Bacterial RecJ exonuclease IPN28_07935 IPR001667 DDH domain IPN28_07950 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain IPN28_07950 IPR026660 Phosphoribosyl-AMP cyclohydrolase IPN28_07950 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily IPN28_07960 IPR006284 Glutathione synthetase, prokaryotic IPN28_07960 IPR013815 ATP-grasp fold, subdomain 1 IPN28_07960 IPR011761 ATP-grasp fold IPN28_07960 IPR004215 Prokaryotic glutathione synthetase, N-terminal IPN28_07960 IPR016185 Pre-ATP-grasp domain superfamily IPN28_07960 IPR004218 Prokaryotic glutathione synthetase, ATP-binding IPN28_07965 IPR014001 Helicase superfamily 1/2, ATP-binding domain IPN28_07965 IPR001650 Helicase, C-terminal IPN28_07965 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_07965 IPR028622 ATP-dependent RNA helicase RhlE IPN28_07965 IPR011545 DEAD/DEAH box helicase domain IPN28_07965 IPR014014 RNA helicase, DEAD-box type, Q motif IPN28_07965 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site IPN28_07970 IPR020889 LPS-assembly protein LptD IPN28_07970 IPR007543 LptD, C-terminal IPN28_07970 IPR005653 Organic solvent tolerance-like, N-terminal IPN28_07985 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_07985 IPR002288 DNA gyrase B subunit, C-terminal IPN28_07985 IPR001241 DNA topoisomerase, type IIA IPN28_07985 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_07985 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_07985 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal IPN28_07985 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 IPN28_07985 IPR018522 DNA topoisomerase, type IIA, conserved site IPN28_07985 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative IPN28_07985 IPR006171 TOPRIM domain IPN28_07985 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_07985 IPR013760 DNA topoisomerase, type IIA-like domain superfamily IPN28_07995 IPR001637 Glutamine synthetase class-I, adenylation site IPN28_07995 IPR004809 Glutamine synthetase type I IPN28_07995 IPR027302 Glutamine synthetase, N-terminal conserved site IPN28_07995 IPR008146 Glutamine synthetase, catalytic domain IPN28_07995 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IPN28_07995 IPR036651 Glutamine synthetase, N-terminal domain superfamily IPN28_07995 IPR008147 Glutamine synthetase, beta-Grasp domain IPN28_07995 IPR027303 Glutamine synthetase, glycine-rich site IPN28_08005 IPR029056 Ribokinase-like IPN28_08005 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr IPN28_08005 IPR004443 YjeF N-terminal domain IPN28_08005 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase IPN28_08005 IPR036652 YjeF N-terminal domain superfamily IPN28_08015 IPR005215 Trigger factor IPN28_08015 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain IPN28_08015 IPR008881 Trigger factor, ribosome-binding, bacterial IPN28_08015 IPR036611 Trigger factor ribosome-binding domain superfamily IPN28_08015 IPR027304 Trigger factor/SurA domain superfamily IPN28_08015 IPR037041 Trigger factor, C-terminal domain superfamily IPN28_08015 IPR008880 Trigger factor, C-terminal IPN28_08020 IPR001907 ATP-dependent Clp protease proteolytic subunit IPN28_08020 IPR029045 ClpP/crotonase-like domain superfamily IPN28_08020 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA IPN28_08020 IPR033135 ClpP, histidine active site IPN28_08020 IPR018215 ClpP, Ser active site IPN28_08025 IPR027065 Lon protease IPN28_08025 IPR008269 Peptidase S16, Lon proteolytic domain IPN28_08025 IPR003593 AAA+ ATPase domain IPN28_08025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPN28_08025 IPR004815 Lon protease, bacterial/eukaryotic-type IPN28_08025 IPR003959 ATPase, AAA-type, core IPN28_08025 IPR027543 Lon protease, bacterial IPN28_08025 IPR015947 PUA-like superfamily IPN28_08025 IPR003111 Lon, substrate-binding domain IPN28_08025 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_08025 IPR008268 Peptidase S16, active site IPN28_08025 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08030 IPR000119 Histone-like DNA-binding protein IPN28_08030 IPR020816 Histone-like DNA-binding protein, conserved site IPN28_08030 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily IPN28_08065 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type IPN28_08065 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial IPN28_08065 IPR011005 Dihydropteroate synthase-like IPN28_08070 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal IPN28_08070 IPR036291 NAD(P)-binding domain superfamily IPN28_08070 IPR008141 Alanine dehydrogenase IPN28_08070 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain IPN28_08070 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 IPN28_08090 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid IPN28_08090 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 IPN28_08090 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily IPN28_08095 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit IPN28_08095 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit IPN28_08100 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site IPN28_08100 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit IPN28_08100 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily IPN28_08100 IPR010218 NADH dehydrogenase, subunit C IPN28_08105 IPR029014 [NiFe]-hydrogenase, large subunit IPN28_08105 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H IPN28_08105 IPR001135 NADH-quinone oxidoreductase, subunit D IPN28_08105 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily IPN28_08105 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site IPN28_08115 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal IPN28_08115 IPR036249 Thioredoxin-like superfamily IPN28_08115 IPR002023 NADH-quinone oxidoreductase subunit E-like IPN28_08115 IPR042128 NuoE domain IPN28_08125 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily IPN28_08125 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain IPN28_08125 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily IPN28_08125 IPR019554 Soluble ligand binding domain IPN28_08125 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site IPN28_08125 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain IPN28_08125 IPR011537 NADH ubiquinone oxidoreductase, F subunit IPN28_08145 IPR017926 Glutamine amidotransferase IPN28_08145 IPR029062 Class I glutamine amidotransferase-like IPN28_08145 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ IPN28_08150 IPR036921 PurM-like, N-terminal domain superfamily IPN28_08150 IPR016188 PurM-like, N-terminal domain IPN28_08150 IPR036676 PurM-like, C-terminal domain superfamily IPN28_08150 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain IPN28_08150 IPR010074 Phosphoribosylformylglycinamidine subunit PurL IPN28_08150 IPR010918 PurM-like, C-terminal domain IPN28_08160 IPR010228 NADH:ubiquinone oxidoreductase, subunit G IPN28_08160 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IPN28_08160 IPR036010 2Fe-2S ferredoxin-like superfamily IPN28_08160 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding IPN28_08160 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain IPN28_08160 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal IPN28_08160 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site IPN28_08160 IPR006656 Molybdopterin oxidoreductase IPN28_08180 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site IPN28_08180 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H IPN28_08185 IPR010226 NADH-quinone oxidoreductase, chain I IPN28_08185 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site IPN28_08185 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain IPN28_08195 IPR018550 Lipid A 3-O-deacylase-related IPN28_08195 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel IPN28_08200 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ IPN28_08200 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 IPN28_08205 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K IPN28_08205 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like IPN28_08210 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 IPN28_08210 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup IPN28_08210 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IPN28_08210 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal IPN28_08215 IPR003918 NADH:ubiquinone oxidoreductase IPN28_08215 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal IPN28_08215 IPR010227 NADH-quinone oxidoreductase, chain M/4 IPN28_08215 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IPN28_08220 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IPN28_08220 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 IPN28_08225 IPR004408 Biotin--acetyl-CoA-carboxylase ligase IPN28_08225 IPR004409 Biotin operon repressor, helix-turn-helix domain IPN28_08225 IPR030855 Bifunctional ligase/repressor BirA IPN28_08225 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IPN28_08225 IPR036390 Winged helix DNA-binding domain superfamily IPN28_08225 IPR013196 Helix-turn-helix, type 11 IPN28_08225 IPR008988 Transcriptional repressor, C-terminal IPN28_08225 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_08225 IPR003142 Biotin protein ligase, C-terminal IPN28_08230 IPR004619 Type III pantothenate kinase IPN28_08235 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like IPN28_08235 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain IPN28_08235 IPR042173 Ribonuclease J, domain 2 IPN28_08235 IPR030854 Ribonuclease J, bacteria IPN28_08235 IPR041636 Ribonuclease J, C-terminal IPN28_08235 IPR001279 Metallo-beta-lactamase IPN28_08250 IPR016061 Proline-tRNA ligase, class II, C-terminal IPN28_08250 IPR033721 Prolyl-tRNA synthetase, catalytic domain IPN28_08250 IPR006195 Aminoacyl-tRNA synthetase, class II IPN28_08250 IPR004154 Anticodon-binding IPN28_08250 IPR036621 Anticodon-binding domain superfamily IPN28_08250 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type IPN28_08250 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IPN28_08250 IPR017449 Prolyl-tRNA synthetase, class II IPN28_08255 IPR003838 ABC transporter permease protein domain IPN28_08255 IPR025857 MacB-like periplasmic core domain IPN28_08255 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E IPN28_08260 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08260 IPR003439 ABC transporter-like IPN28_08260 IPR017871 ABC transporter, conserved site IPN28_08260 IPR015854 ABC transporter, lipoprotein release, LolD IPN28_08260 IPR003593 AAA+ ATPase domain IPN28_08265 IPR029058 Alpha/Beta hydrolase fold IPN28_08265 IPR000073 Alpha/beta hydrolase fold-1 IPN28_08265 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase IPN28_08270 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain IPN28_08270 IPR004013 PHP domain IPN28_08270 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain IPN28_08270 IPR003141 Polymerase/histidinol phosphatase, N-terminal IPN28_08270 IPR029460 DNA polymerase, helix-hairpin-helix motif IPN28_08270 IPR016195 Polymerase/histidinol phosphatase-like IPN28_08270 IPR040982 DNA polymerase III alpha subunit finger domain IPN28_08270 IPR004805 DNA polymerase III, alpha subunit IPN28_08275 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily IPN28_08275 IPR001865 Ribosomal protein S2 IPN28_08275 IPR018130 Ribosomal protein S2, conserved site IPN28_08275 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid IPN28_08280 IPR036402 Elongation factor Ts, dimerisation domain superfamily IPN28_08280 IPR018101 Translation elongation factor Ts, conserved site IPN28_08280 IPR001816 Translation elongation factor EFTs/EF1B IPN28_08280 IPR009060 UBA-like superfamily IPN28_08280 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation IPN28_08285 IPR015963 Uridylate kinase, bacteria IPN28_08285 IPR011817 Uridylate kinase IPN28_08285 IPR001048 Aspartate/glutamate/uridylate kinase IPN28_08285 IPR036393 Acetylglutamate kinase-like superfamily IPN28_08290 IPR023584 Ribosome recycling factor domain IPN28_08290 IPR002661 Ribosome recycling factor IPN28_08290 IPR036191 RRF superfamily IPN28_08295 IPR001441 Decaprenyl diphosphate synthase-like IPN28_08295 IPR036424 Decaprenyl diphosphate synthase-like superfamily IPN28_08295 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site IPN28_08300 IPR000374 Phosphatidate cytidylyltransferase IPN28_08305 IPR026877 DXP reductoisomerase C-terminal domain IPN28_08305 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal IPN28_08305 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase IPN28_08305 IPR036291 NAD(P)-binding domain superfamily IPN28_08305 IPR036169 DXP reductoisomerase, C-terminal domain superfamily IPN28_08305 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal IPN28_08310 IPR041489 PDZ domain 6 IPN28_08310 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase IPN28_08310 IPR008915 Peptidase M50 IPN28_08310 IPR001478 PDZ domain IPN28_08310 IPR036034 PDZ superfamily IPN28_08315 IPR008915 Peptidase M50 IPN28_08315 IPR036034 PDZ superfamily IPN28_08315 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase IPN28_08315 IPR001478 PDZ domain IPN28_08315 IPR041489 PDZ domain 6 IPN28_08320 IPR023707 Outer membrane protein assembly factor BamA IPN28_08320 IPR000184 Bacterial surface antigen (D15) IPN28_08320 IPR034746 POTRA domain IPN28_08320 IPR039910 Surface antigen D15-like IPN28_08320 IPR010827 POTRA domain, BamA/TamA-like IPN28_08330 IPR001451 Hexapeptide repeat IPN28_08330 IPR018357 Hexapeptide transferase, conserved site IPN28_08330 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD IPN28_08330 IPR011004 Trimeric LpxA-like superfamily IPN28_08330 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region IPN28_08335 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ IPN28_08335 IPR029069 HotDog domain superfamily IPN28_08335 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ IPN28_08340 IPR011004 Trimeric LpxA-like superfamily IPN28_08340 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase IPN28_08340 IPR018357 Hexapeptide transferase, conserved site IPN28_08340 IPR001451 Hexapeptide repeat IPN28_08340 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily IPN28_08340 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal IPN28_08345 IPR041255 LpxI N-terminal domain IPN28_08345 IPR010415 LpxI, C-terminal IPN28_08350 IPR003835 Glycosyl transferase, family 19 IPN28_08355 IPR024176 Citrate synthase, bacterial-type IPN28_08355 IPR019810 Citrate synthase active site IPN28_08355 IPR010953 Citrate synthase, type I IPN28_08355 IPR016143 Citrate synthase-like, small alpha subdomain IPN28_08355 IPR002020 Citrate synthase IPN28_08355 IPR036969 Citrate synthase superfamily IPN28_08355 IPR016142 Citrate synthase-like, large alpha subdomain IPN28_08360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_08360 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain IPN28_08360 IPR000924 Glutamyl/glutaminyl-tRNA synthetase IPN28_08360 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial IPN28_08360 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPN28_08360 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 IPN28_08360 IPR033910 Glutamyl-tRNA synthetase IPN28_08360 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding IPN28_08370 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_08370 IPR036286 LexA/Signal peptidase-like superfamily IPN28_08370 IPR015927 Peptidase S24/S26A/S26B/S26C IPN28_08370 IPR006199 LexA repressor, DNA-binding domain IPN28_08370 IPR036390 Winged helix DNA-binding domain superfamily IPN28_08370 IPR006200 Transcription regulator LexA IPN28_08370 IPR006197 Peptidase S24, LexA-like IPN28_08370 IPR039418 LexA-like IPN28_08375 IPR013785 Aldolase-type TIM barrel IPN28_08375 IPR013798 Indole-3-glycerol phosphate synthase IPN28_08375 IPR001468 Indole-3-glycerol phosphate synthase, conserved site IPN28_08375 IPR011060 Ribulose-phosphate binding barrel IPN28_08380 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily IPN28_08380 IPR017459 Glycosyl transferase family 3, N-terminal domain IPN28_08380 IPR000312 Glycosyl transferase, family 3 IPN28_08380 IPR005940 Anthranilate phosphoribosyl transferase IPN28_08380 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily IPN28_08385 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain IPN28_08385 IPR017926 Glutamine amidotransferase IPN28_08385 IPR029062 Class I glutamine amidotransferase-like IPN28_08390 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPN28_08390 IPR006837 Divergent polysaccharide deacetylase IPN28_08395 IPR015890 Chorismate-utilising enzyme, C-terminal IPN28_08395 IPR005256 Anthranilate synthase component I, PabB-like IPN28_08395 IPR006805 Anthranilate synthase component I, N-terminal IPN28_08395 IPR019999 Anthranilate synthase component I-like IPN28_08395 IPR005801 ADC synthase IPN28_08405 IPR035990 Triosephosphate isomerase superfamily IPN28_08405 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic IPN28_08405 IPR000652 Triosephosphate isomerase IPN28_08405 IPR020861 Triosephosphate isomerase, active site IPN28_08405 IPR013785 Aldolase-type TIM barrel IPN28_08410 IPR004692 Preprotein translocase SecG subunit IPN28_08415 IPR029062 Class I glutamine amidotransferase-like IPN28_08415 IPR004468 CTP synthase IPN28_08415 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08415 IPR017456 CTP synthase, N-terminal IPN28_08415 IPR017926 Glutamine amidotransferase IPN28_08415 IPR033828 CTP synthase GATase domain IPN28_08420 IPR023576 UbiE/COQ5 methyltransferase, conserved site IPN28_08420 IPR004033 UbiE/COQ5 methyltransferase IPN28_08420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_08425 IPR006269 3-deoxy-8-phosphooctulonate synthase IPN28_08425 IPR013785 Aldolase-type TIM barrel IPN28_08425 IPR006218 DAHP synthetase I/KDSA IPN28_08435 IPR029017 Enolase-like, N-terminal IPN28_08435 IPR000941 Enolase IPN28_08435 IPR020809 Enolase, conserved site IPN28_08435 IPR020811 Enolase, N-terminal IPN28_08435 IPR020810 Enolase, C-terminal TIM barrel domain IPN28_08435 IPR036849 Enolase-like, C-terminal domain superfamily IPN28_08440 IPR003774 Protein of unknown function UPF0301 IPN28_08450 IPR029061 Thiamin diphosphate-binding fold IPN28_08450 IPR001017 Dehydrogenase, E1 component IPN28_08450 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y IPN28_08465 IPR033248 Transketolase, C-terminal domain IPN28_08465 IPR000089 Biotin/lipoyl attachment IPN28_08465 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPN28_08465 IPR005475 Transketolase-like, pyrimidine-binding domain IPN28_08465 IPR027110 Pyruvate dehydrogenase E1 component subunit beta IPN28_08465 IPR011053 Single hybrid motif IPN28_08465 IPR029061 Thiamin diphosphate-binding fold IPN28_08465 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPN28_08475 IPR036625 E3-binding domain superfamily IPN28_08475 IPR011053 Single hybrid motif IPN28_08475 IPR004167 Peripheral subunit-binding domain IPN28_08475 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPN28_08475 IPR000089 Biotin/lipoyl attachment IPN28_08475 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IPN28_08475 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex IPN28_08475 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IPN28_08490 IPR006258 Dihydrolipoamide dehydrogenase IPN28_08490 IPR023753 FAD/NAD(P)-binding domain IPN28_08490 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IPN28_08490 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPN28_08490 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_08490 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IPN28_08490 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPN28_08500 IPR003698 Lipoyl synthase IPN28_08500 IPR006638 Elp3/MiaB/NifB IPN28_08500 IPR007197 Radical SAM IPN28_08500 IPR013785 Aldolase-type TIM barrel IPN28_08505 IPR023393 START-like domain superfamily IPN28_08505 IPR005031 Coenzyme Q-binding protein COQ10, START domain IPN28_08510 IPR001453 MoaB/Mog domain IPN28_08510 IPR041424 CinA, KH domain IPN28_08510 IPR036653 CinA-like, C-terminal IPN28_08510 IPR008136 CinA, C-terminal IPN28_08510 IPR008135 Competence-induced protein CinA IPN28_08510 IPR036425 MoaB/Mog-like domain superfamily IPN28_08515 IPR007686 YutG/PgpA domain IPN28_08515 IPR036681 PgpA-like superfamily IPN28_08515 IPR026037 Phosphatidylglycerophosphatase A IPN28_08520 IPR034683 Cytidylyltransferase IspD/TarI IPN28_08520 IPR026596 Bifunctional enzyme IspD/IspF IPN28_08520 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IPN28_08520 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site IPN28_08520 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site IPN28_08520 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily IPN28_08520 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_08520 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IPN28_08525 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator IPN28_08525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_08525 IPR005467 Histidine kinase domain IPN28_08525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_08525 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_08525 IPR003660 HAMP domain IPN28_08530 IPR003593 AAA+ ATPase domain IPN28_08530 IPR011006 CheY-like superfamily IPN28_08530 IPR009057 Homeobox-like domain superfamily IPN28_08530 IPR002197 DNA binding HTH domain, Fis-type IPN28_08530 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08530 IPR001789 Signal transduction response regulator, receiver domain IPN28_08530 IPR025944 Sigma-54 interaction domain, conserved site IPN28_08530 IPR002078 RNA polymerase sigma factor 54 interaction domain IPN28_08530 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPN28_08535 IPR004391 Glutamate racemase IPN28_08535 IPR018187 Asp/Glu racemase, active site 1 IPN28_08535 IPR001920 Asp/Glu racemase IPN28_08535 IPR015942 Asp/Glu/hydantoin racemase IPN28_08545 IPR010920 LSM domain superfamily IPN28_08545 IPR005001 RNA-binding protein Hfq IPN28_08550 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08550 IPR042108 GTPase HflX, N-terminal domain superfamily IPN28_08550 IPR025121 GTPase HflX, N-terminal IPN28_08550 IPR006073 GTP binding domain IPN28_08550 IPR032305 GTP-binding protein, middle domain IPN28_08550 IPR016496 GTPase HflX IPN28_08550 IPR030394 HflX-type guanine nucleotide-binding (G) domain IPN28_08555 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 IPN28_08555 IPR028261 Dihydroprymidine dehydrogenase domain II IPN28_08555 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_08555 IPR023753 FAD/NAD(P)-binding domain IPN28_08555 IPR009051 Alpha-helical ferredoxin IPN28_08560 IPR017932 Glutamine amidotransferase type 2 domain IPN28_08560 IPR013785 Aldolase-type TIM barrel IPN28_08560 IPR029055 Nucleophile aminohydrolases, N-terminal IPN28_08560 IPR002932 Glutamate synthase domain IPN28_08560 IPR006982 Glutamate synthase, central-N IPN28_08560 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily IPN28_08560 IPR002489 Glutamate synthase, alpha subunit, C-terminal IPN28_08565 IPR011551 NTP pyrophosphohydrolase MazG IPN28_08565 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core IPN28_08575 IPR005467 Histidine kinase domain IPN28_08575 IPR001789 Signal transduction response regulator, receiver domain IPN28_08575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_08575 IPR036641 HPT domain superfamily IPN28_08575 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_08575 IPR019247 Histidine kinase BarA, N-terminal IPN28_08575 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_08575 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain IPN28_08575 IPR003660 HAMP domain IPN28_08575 IPR011006 CheY-like superfamily IPN28_08575 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_08575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_08580 IPR011006 CheY-like superfamily IPN28_08580 IPR001789 Signal transduction response regulator, receiver domain IPN28_08585 IPR011006 CheY-like superfamily IPN28_08585 IPR001789 Signal transduction response regulator, receiver domain IPN28_08590 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPN28_08590 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPN28_08590 IPR002078 RNA polymerase sigma factor 54 interaction domain IPN28_08590 IPR001789 Signal transduction response regulator, receiver domain IPN28_08590 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08590 IPR002197 DNA binding HTH domain, Fis-type IPN28_08590 IPR009057 Homeobox-like domain superfamily IPN28_08590 IPR011006 CheY-like superfamily IPN28_08590 IPR003593 AAA+ ATPase domain IPN28_08590 IPR025944 Sigma-54 interaction domain, conserved site IPN28_08600 IPR002481 Ferric-uptake regulator IPN28_08600 IPR036390 Winged helix DNA-binding domain superfamily IPN28_08600 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_08615 IPR011924 Lipoprotein releasing system, ATP-binding protein IPN28_08615 IPR015854 ABC transporter, lipoprotein release, LolD IPN28_08615 IPR017871 ABC transporter, conserved site IPN28_08615 IPR003439 ABC transporter-like IPN28_08615 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08615 IPR003593 AAA+ ATPase domain IPN28_08635 IPR018228 Deoxyribonuclease, TatD-related, conserved site IPN28_08635 IPR015991 Uncharacterised hydrolase TatD-type IPN28_08635 IPR032466 Metal-dependent hydrolase IPN28_08635 IPR001130 TatD family IPN28_08640 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPN28_08640 IPR014758 Methionyl-tRNA synthetase IPN28_08640 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain IPN28_08640 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPN28_08640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_08640 IPR033911 Methioninyl-tRNA synthetase core domain IPN28_08640 IPR015413 Methionyl/Leucyl tRNA synthetase IPN28_08640 IPR023457 Methionine-tRNA synthetase, type 2 IPN28_08650 IPR018094 Thymidylate kinase IPN28_08650 IPR039430 Thymidylate kinase-like domain IPN28_08650 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08655 IPR012338 Beta-lactamase/transpeptidase-like IPN28_08655 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A IPN28_08655 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal IPN28_08655 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily IPN28_08655 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal IPN28_08655 IPR015956 Penicillin-binding protein, C-terminal domain superfamily IPN28_08660 IPR034718 Endolytic peptidoglycan transglycosylase RlpA IPN28_08660 IPR009009 RlpA-like protein, double-psi beta-barrel domain IPN28_08660 IPR036908 RlpA-like domain superfamily IPN28_08660 IPR022438 Rickettsia palindromic element RPE5 IPN28_08660 IPR012997 Rare lipoprotein A IPN28_08665 IPR023346 Lysozyme-like domain superfamily IPN28_08665 IPR031304 Transglycosylase SLT domain 2 IPN28_08665 IPR011757 Lytic transglycosylase MltB IPN28_08675 IPR032818 DedA family IPN28_08675 IPR032816 SNARE associated Golgi protein IPN28_08745 IPR036390 Winged helix DNA-binding domain superfamily IPN28_08745 IPR002577 Helix-turn-helix, HxlR type IPN28_08745 IPR011991 ArsR-like helix-turn-helix domain IPN28_08745 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_08815 IPR014895 Alginate lyase 2 IPN28_08815 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily IPN28_08855 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site IPN28_08855 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_08855 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_08855 IPR004839 Aminotransferase, class I/classII IPN28_08855 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_08875 IPR022689 Iron dependent repressor IPN28_08875 IPR001367 Iron dependent repressor, metal binding and dimerisation domain IPN28_08875 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily IPN28_08875 IPR022687 DTXR-type HTH domain IPN28_08875 IPR036390 Winged helix DNA-binding domain superfamily IPN28_08875 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_08880 IPR001046 NRAMP family IPN28_08885 IPR028909 Ribosomal protein L21-like IPN28_08885 IPR036164 L21-like superfamily IPN28_08885 IPR001787 Ribosomal protein L21 IPN28_08890 IPR018261 Ribosomal protein L27, conserved site IPN28_08890 IPR001684 Ribosomal protein L27 IPN28_08895 IPR006169 GTP1/OBG domain IPN28_08895 IPR014100 GTP-binding protein Obg/CgtA IPN28_08895 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08895 IPR006073 GTP binding domain IPN28_08895 IPR006074 GTP1/OBG, conserved site IPN28_08895 IPR031167 OBG-type guanine nucleotide-binding (G) domain IPN28_08895 IPR035101 GTP-binding protein, Obg-type IPN28_08895 IPR036726 GTP1/OBG domain superfamily IPN28_08900 IPR015947 PUA-like superfamily IPN28_08900 IPR002478 PUA domain IPN28_08900 IPR036974 PUA domain superfamily IPN28_08900 IPR036393 Acetylglutamate kinase-like superfamily IPN28_08900 IPR001048 Aspartate/glutamate/uridylate kinase IPN28_08900 IPR041739 Glutamate-5-kinase domain IPN28_08900 IPR001057 Glutamate/acetylglutamate kinase IPN28_08900 IPR011529 Glutamate 5-kinase IPN28_08900 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase IPN28_08900 IPR019797 Glutamate 5-kinase, conserved site IPN28_08905 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal IPN28_08905 IPR012779 Peptidase M1, alanyl aminopeptidase IPN28_08905 IPR014782 Peptidase M1, membrane alanine aminopeptidase IPN28_08905 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily IPN28_08905 IPR042097 Aminopeptidase N-like , N-terminal IPN28_08905 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold IPN28_08905 IPR027268 Peptidase M4/M1, CTD superfamily IPN28_08905 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily IPN28_08905 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase IPN28_08910 IPR022898 Ribonuclease HII IPN28_08910 IPR036397 Ribonuclease H superfamily IPN28_08910 IPR001352 Ribonuclease HII/HIII IPN28_08910 IPR024567 Ribonuclease HII/HIII domain IPN28_08910 IPR012337 Ribonuclease H-like superfamily IPN28_08915 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPN28_08915 IPR002941 DNA methylase N-4/N-6 IPN28_08915 IPR001091 Restriction/modification DNA-methylase IPN28_08915 IPR040843 Restriction enzyme adenine methylase associated IPN28_08915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_08930 IPR015797 NUDIX hydrolase-like domain superfamily IPN28_08930 IPR029119 MutY, C-terminal IPN28_08930 IPR011257 DNA glycosylase IPN28_08930 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif IPN28_08930 IPR003265 HhH-GPD domain IPN28_08930 IPR005760 A/G-specific adenine glycosylase MutY IPN28_08930 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal IPN28_08940 IPR008991 Translation protein SH3-like domain superfamily IPN28_08940 IPR011768 Translation elongation factor P IPN28_08940 IPR013852 Translation elongation factor P/YeiP, conserved site IPN28_08940 IPR001059 Translation elongation factor P/YeiP, central IPN28_08940 IPR020599 Translation elongation factor P/YeiP IPN28_08940 IPR014722 Ribosomal protein L2, domain 2 IPN28_08940 IPR012340 Nucleic acid-binding, OB-fold IPN28_08940 IPR013185 Translation elongation factor, KOW-like IPN28_08940 IPR015365 Elongation factor P, C-terminal IPN28_08945 IPR033942 Inositol monophosphatase IPN28_08945 IPR020583 Inositol monophosphatase, metal-binding site IPN28_08945 IPR000760 Inositol monophosphatase-like IPN28_08945 IPR020550 Inositol monophosphatase, conserved site IPN28_08945 IPR022337 Inositol monophosphatase, SuhB IPN28_08960 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_08960 IPR003395 RecF/RecN/SMC, N-terminal IPN28_08960 IPR024704 Structural maintenance of chromosomes protein IPN28_08960 IPR036277 SMCs flexible hinge superfamily IPN28_08960 IPR011890 Structural maintenance of chromosomes protein, prokaryotic IPN28_08970 IPR000568 ATP synthase, F0 complex, subunit A IPN28_08970 IPR035908 ATP synthase, F0 complex, subunit A superfamily IPN28_08980 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast IPN28_08985 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast IPN28_08990 IPR000965 GPR domain IPN28_08990 IPR012134 Glutamate-5-semialdehyde dehydrogenase IPN28_08990 IPR015590 Aldehyde dehydrogenase domain IPN28_08990 IPR016162 Aldehyde dehydrogenase, N-terminal IPN28_08990 IPR016163 Aldehyde dehydrogenase, C-terminal IPN28_08990 IPR016161 Aldehyde/histidinol dehydrogenase IPN28_08990 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site IPN28_08995 IPR004821 Cytidyltransferase-like domain IPN28_08995 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase IPN28_08995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_09000 IPR004394 Protein Iojap/ribosomal silencing factor RsfS IPN28_09005 IPR029028 Alpha/beta knot methyltransferases IPN28_09005 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPN28_09005 IPR003742 RNA methyltransferase RlmH IPN28_09015 IPR005151 Tail specific protease IPN28_09015 IPR004447 C-terminal-processing peptidase S41A IPN28_09015 IPR001478 PDZ domain IPN28_09015 IPR036034 PDZ superfamily IPN28_09015 IPR029045 ClpP/crotonase-like domain superfamily IPN28_09025 IPR000086 NUDIX hydrolase domain IPN28_09025 IPR020084 NUDIX hydrolase, conserved site IPN28_09025 IPR020476 NUDIX hydrolase IPN28_09025 IPR015797 NUDIX hydrolase-like domain superfamily IPN28_09025 IPR022927 RNA pyrophosphohydrolase RppH IPN28_09030 IPR014167 Tol-Pal system protein TolB IPN28_09030 IPR036752 TolB, N-terminal domain superfamily IPN28_09030 IPR011042 Six-bladed beta-propeller, TolB-like IPN28_09030 IPR007195 TolB, N-terminal IPN28_09030 IPR011659 WD40-like Beta Propeller IPN28_09040 IPR003400 Biopolymer transport protein ExbD/TolR IPN28_09040 IPR014170 TonB system transport protein ExbD type-1 IPN28_09045 IPR014163 Tol-Pal system, TolQ IPN28_09045 IPR002898 MotA/TolQ/ExbB proton channel IPN28_09050 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family IPN28_09050 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site IPN28_09050 IPR006683 Thioesterase domain IPN28_09050 IPR029069 HotDog domain superfamily IPN28_09050 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase IPN28_09055 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_09055 IPR003593 AAA+ ATPase domain IPN28_09055 IPR041445 RuvB, AAA lid domain IPN28_09055 IPR036390 Winged helix DNA-binding domain superfamily IPN28_09055 IPR008824 RuvB-like P-loop domain IPN28_09055 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_09055 IPR008823 RuvB C-terminal winged helix domain IPN28_09055 IPR004605 DNA helicase, Holliday junction RuvB-type IPN28_09060 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial IPN28_09060 IPR012340 Nucleic acid-binding, OB-fold IPN28_09060 IPR000085 Bacterial DNA recombination protein RuvA IPN28_09060 IPR010994 RuvA domain 2-like IPN28_09060 IPR011114 Holliday junction DNA helicase RuvA, C-terminal IPN28_09060 IPR036267 RuvA, C-terminal domain superfamily IPN28_09065 IPR002176 Crossover junction endodeoxyribonuclease RuvC IPN28_09065 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site IPN28_09065 IPR036397 Ribonuclease H superfamily IPN28_09065 IPR012337 Ribonuclease H-like superfamily IPN28_09070 IPR002876 Transcriptional regulator TACO1-like IPN28_09070 IPR026564 Transcriptional regulator TACO1-like, domain 3 IPN28_09070 IPR017856 Integrase-like, N-terminal IPN28_09070 IPR029072 YebC-like IPN28_09085 IPR029052 Metallo-dependent phosphatase-like IPN28_09085 IPR005235 Metallophosphoesterase, YmdB-like IPN28_09090 IPR002698 5-formyltetrahydrofolate cyclo-ligase IPN28_09090 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily IPN28_09090 IPR037171 NagB/RpiA transferase-like IPN28_09110 IPR005478 Transketolase, bacterial-like IPN28_09110 IPR020826 Transketolase binding site IPN28_09110 IPR005475 Transketolase-like, pyrimidine-binding domain IPN28_09110 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPN28_09110 IPR029061 Thiamin diphosphate-binding fold IPN28_09110 IPR033248 Transketolase, C-terminal domain IPN28_09110 IPR033247 Transketolase family IPN28_09110 IPR005474 Transketolase, N-terminal IPN28_09115 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain IPN28_09115 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family IPN28_09115 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site IPN28_09115 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain IPN28_09115 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I IPN28_09115 IPR036291 NAD(P)-binding domain superfamily IPN28_09125 IPR013785 Aldolase-type TIM barrel IPN28_09125 IPR002915 DeoC/FbaB/ lacD aldolase IPN28_09125 IPR041720 Aldolase FbaB-like, archaeal-type IPN28_09135 IPR004525 Elongation factor P--(R)-beta-lysine ligase IPN28_09135 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal IPN28_09135 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IPN28_09135 IPR006195 Aminoacyl-tRNA synthetase, class II IPN28_09140 IPR027491 Ribosomal protein L31 type A IPN28_09140 IPR002150 Ribosomal protein L31 IPN28_09140 IPR042105 Ribosomal protein L31 superfamily IPN28_09140 IPR034704 L28p-like IPN28_09150 IPR002300 Aminoacyl-tRNA synthetase, class Ia IPN28_09150 IPR033705 Valyl tRNA synthetase, anticodon-binding domain IPN28_09150 IPR002303 Valine-tRNA ligase IPN28_09150 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain IPN28_09150 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm IPN28_09150 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily IPN28_09150 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IPN28_09150 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding IPN28_09150 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPN28_09150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_09150 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding IPN28_09160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_09160 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase IPN28_09185 IPR019794 Peroxidase, active site IPN28_09185 IPR010255 Haem peroxidase superfamily IPN28_09185 IPR002016 Haem peroxidase IPN28_09185 IPR000763 Catalase-peroxidase haem IPN28_09190 IPR002481 Ferric-uptake regulator IPN28_09190 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_09190 IPR036390 Winged helix DNA-binding domain superfamily IPN28_09195 IPR008162 Inorganic pyrophosphatase IPN28_09195 IPR036649 Inorganic pyrophosphatase superfamily IPN28_09200 IPR036249 Thioredoxin-like superfamily IPN28_09200 IPR013766 Thioredoxin domain IPN28_09200 IPR017937 Thioredoxin, conserved site IPN28_09200 IPR013740 Redoxin IPN28_09200 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE IPN28_09205 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_09205 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_09205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_09205 IPR005467 Histidine kinase domain IPN28_09205 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_09205 IPR003660 HAMP domain IPN28_09205 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_09210 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_09210 IPR039420 Transcriptional regulatory protein WalR-like IPN28_09210 IPR001789 Signal transduction response regulator, receiver domain IPN28_09210 IPR016032 Signal transduction response regulator, C-terminal effector IPN28_09210 IPR001867 OmpR/PhoB-type DNA-binding domain IPN28_09210 IPR011006 CheY-like superfamily IPN28_09230 IPR001763 Rhodanese-like domain IPN28_09230 IPR001307 Thiosulphate sulfurtransferase, conserved site IPN28_09230 IPR036873 Rhodanese-like domain superfamily IPN28_09245 IPR030390 RNA methyltransferase TrmA, active site IPN28_09245 IPR010280 (Uracil-5)-methyltransferase family IPN28_09245 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_09245 IPR012340 Nucleic acid-binding, OB-fold IPN28_09280 IPR003688 Type IV secretion system protein TraG/VirD4 IPN28_09280 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_09315 IPR022385 Rhs repeat-associated core IPN28_09315 IPR001826 RHS protein IPN28_09315 IPR025479 Domain of unknown function DUF4329 IPN28_09315 IPR006530 YD repeat IPN28_09315 IPR031325 RHS repeat IPN28_09330 IPR006171 TOPRIM domain IPN28_09330 IPR041459 Polyvalent protein, metallopeptidase domain IPN28_09330 IPR013610 Domain of unknown function DUF1738 IPN28_09330 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain IPN28_09345 IPR041468 ParB/Spo0J, HTH domain IPN28_09345 IPR004437 ParB/RepB/Spo0J partition protein IPN28_09345 IPR003115 ParB/Sulfiredoxin IPN28_09345 IPR036086 ParB/Sulfiredoxin superfamily IPN28_09360 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_09370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_09370 IPR012327 D12 class N6 adenine-specific DNA methyltransferase IPN28_09370 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site IPN28_09385 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPN28_09385 IPR001387 Cro/C1-type helix-turn-helix domain IPN28_09435 IPR002646 Poly A polymerase, head domain IPN28_09435 IPR038763 DHH phosphoesterase superfamily IPN28_09435 IPR001667 DDH domain IPN28_09435 IPR000644 CBS domain IPN28_09435 IPR003156 DHHA1 domain IPN28_09440 IPR022742 Serine aminopeptidase, S33 IPN28_09440 IPR029058 Alpha/Beta hydrolase fold IPN28_09445 IPR022742 Serine aminopeptidase, S33 IPN28_09445 IPR029058 Alpha/Beta hydrolase fold IPN28_09450 IPR003593 AAA+ ATPase domain IPN28_09450 IPR011527 ABC transporter type 1, transmembrane domain IPN28_09450 IPR036640 ABC transporter type 1, transmembrane domain superfamily IPN28_09450 IPR003439 ABC transporter-like IPN28_09450 IPR017871 ABC transporter, conserved site IPN28_09450 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_09450 IPR039421 Type I protein exporter IPN28_09450 IPR011917 ABC transporter, lipid A export, MsbA IPN28_09455 IPR002641 Patatin-like phospholipase domain IPN28_09455 IPR001423 Lysophospholipase patatin, conserved site IPN28_09455 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase IPN28_09470 IPR001463 Sodium:alanine symporter IPN28_09480 IPR036291 NAD(P)-binding domain superfamily IPN28_09480 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IPN28_09480 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPN28_09485 IPR013848 Methylthiotransferase, N-terminal IPN28_09485 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB IPN28_09485 IPR002792 TRAM domain IPN28_09485 IPR023404 Radical SAM, alpha/beta horseshoe IPN28_09485 IPR038135 Methylthiotransferase, N-terminal domain superfamily IPN28_09485 IPR006638 Elp3/MiaB/NifB IPN28_09485 IPR005839 Methylthiotransferase IPN28_09485 IPR020612 Methylthiotransferase, conserved site IPN28_09485 IPR007197 Radical SAM IPN28_09495 IPR003714 PhoH-like protein IPN28_09495 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_09500 IPR023091 Metalloprotease catalytic domain superfamily, predicted IPN28_09500 IPR020549 Endoribonuclease YbeY, conserved site IPN28_09500 IPR002036 Endoribonuclease YbeY IPN28_09505 IPR016169 FAD-binding, type PCMH, subdomain 2 IPN28_09505 IPR036318 FAD-binding, type PCMH-like superfamily IPN28_09505 IPR000644 CBS domain IPN28_09505 IPR005170 Transporter-associated domain IPN28_09510 IPR003010 Carbon-nitrogen hydrolase IPN28_09510 IPR004563 Apolipoprotein N-acyltransferase IPN28_09510 IPR036526 Carbon-nitrogen hydrolase superfamily IPN28_09515 IPR001387 Cro/C1-type helix-turn-helix domain IPN28_09515 IPR010982 Lambda repressor-like, DNA-binding domain superfamily IPN28_09520 IPR022631 S-adenosylmethionine synthetase, conserved site IPN28_09520 IPR022630 S-adenosylmethionine synthetase, C-terminal IPN28_09520 IPR022629 S-adenosylmethionine synthetase, central domain IPN28_09520 IPR002133 S-adenosylmethionine synthetase IPN28_09520 IPR022628 S-adenosylmethionine synthetase, N-terminal IPN28_09520 IPR022636 S-adenosylmethionine synthetase superfamily IPN28_09525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_09525 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type IPN28_09530 IPR003728 Ribosome maturation factor RimP IPN28_09530 IPR028998 Ribosome maturation factor RimP, C-terminal IPN28_09530 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily IPN28_09530 IPR028989 Ribosome maturation factor RimP, N-terminal IPN28_09530 IPR035956 RimP, N-terminal domain superfamily IPN28_09535 IPR004087 K Homology domain IPN28_09535 IPR010213 Transcription termination factor NusA IPN28_09535 IPR010214 Transcription termination factor NusA, C-terminal duplication IPN28_09535 IPR003029 S1 domain IPN28_09535 IPR022967 RNA-binding domain, S1 IPN28_09535 IPR012340 Nucleic acid-binding, OB-fold IPN28_09535 IPR030842 Transcription termination/antitermination protein NusA, bacterial IPN28_09535 IPR025249 KH domain, NusA-like IPN28_09535 IPR009019 K homology domain superfamily, prokaryotic type IPN28_09535 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical IPN28_09535 IPR036555 NusA, N-terminal domain superfamily IPN28_09535 IPR015946 K homology domain-like, alpha/beta IPN28_09535 IPR013735 Transcription factor NusA, N-terminal IPN28_09540 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_09540 IPR023115 Translation initiation factor IF- 2, domain 3 IPN28_09540 IPR015760 Translation initiation factor IF- 2 IPN28_09540 IPR000178 Translation initiation factor aIF-2, bacterial-like IPN28_09540 IPR000795 Transcription factor, GTP-binding domain IPN28_09540 IPR005225 Small GTP-binding protein domain IPN28_09540 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_09540 IPR006847 Translation initiation factor IF-2, N-terminal IPN28_09540 IPR013575 Initiation factor 2 associated domain, bacterial IPN28_09540 IPR036925 Translation initiation factor IF-2, domain 3 superfamily IPN28_09540 IPR004161 Translation elongation factor EFTu-like, domain 2 IPN28_09545 IPR020053 Ribosome-binding factor A, conserved site IPN28_09545 IPR023799 Ribosome-binding factor A domain superfamily IPN28_09545 IPR000238 Ribosome-binding factor A IPN28_09545 IPR015946 K homology domain-like, alpha/beta IPN28_09550 IPR014780 tRNA pseudouridine synthase II, TruB IPN28_09550 IPR020103 Pseudouridine synthase, catalytic domain superfamily IPN28_09550 IPR002501 Pseudouridine synthase II, N-terminal IPN28_09550 IPR032819 tRNA pseudouridylate synthase B, C-terminal IPN28_09555 IPR009068 S15/NS1, RNA-binding IPN28_09555 IPR005290 Ribosomal protein S15, bacterial-type IPN28_09555 IPR000589 Ribosomal protein S15 IPN28_09570 IPR029033 Histidine phosphatase superfamily IPN28_09570 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site IPN28_09570 IPR013078 Histidine phosphatase superfamily, clade-1 IPN28_09570 IPR005952 Phosphoglycerate mutase 1 IPN28_09575 IPR004088 K Homology domain, type 1 IPN28_09575 IPR036612 K Homology domain, type 1 superfamily IPN28_09575 IPR012340 Nucleic acid-binding, OB-fold IPN28_09575 IPR012162 Polyribonucleotide nucleotidyltransferase IPN28_09575 IPR027408 PNPase/RNase PH domain superfamily IPN28_09575 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain IPN28_09575 IPR001247 Exoribonuclease, phosphorolytic domain 1 IPN28_09575 IPR004087 K Homology domain IPN28_09575 IPR022967 RNA-binding domain, S1 IPN28_09575 IPR036345 Exoribonuclease, PH domain 2 superfamily IPN28_09575 IPR003029 S1 domain IPN28_09575 IPR015847 Exoribonuclease, phosphorolytic domain 2 IPN28_09575 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_09605 IPR002656 Acyltransferase 3 IPN28_09620 IPR002347 Short-chain dehydrogenase/reductase SDR IPN28_09620 IPR036291 NAD(P)-binding domain superfamily IPN28_09620 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) IPN28_09625 IPR016039 Thiolase-like IPN28_09625 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain IPN28_09625 IPR014030 Beta-ketoacyl synthase, N-terminal IPN28_09625 IPR014031 Beta-ketoacyl synthase, C-terminal IPN28_09625 IPR018201 Beta-ketoacyl synthase, active site IPN28_09625 IPR000794 Beta-ketoacyl synthase IPN28_09630 IPR029069 HotDog domain superfamily IPN28_09630 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ IPN28_09630 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA IPN28_09645 IPR035587 DUS-like, FMN-binding domain IPN28_09645 IPR004653 tRNA-dihydrouridine(20/20a) synthase IPN28_09645 IPR001269 tRNA-dihydrouridine synthase IPN28_09645 IPR018517 tRNA-dihydrouridine synthase, conserved site IPN28_09645 IPR013785 Aldolase-type TIM barrel IPN28_09655 IPR000361 FeS cluster biogenesis IPN28_09655 IPR017870 FeS cluster insertion, C-terminal, conserved site IPN28_09655 IPR035903 HesB-like domain superfamily IPN28_09655 IPR016092 FeS cluster insertion protein IPN28_09660 IPR034904 Fe-S cluster assembly domain superfamily IPN28_09660 IPR002744 MIP18 family-like IPN28_09670 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IPN28_09670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_09670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_09670 IPR000192 Aminotransferase class V domain IPN28_09670 IPR010970 Cysteine desulfurase, SufS IPN28_09670 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_09675 IPR011335 Restriction endonuclease type II-like IPN28_09675 IPR007569 Protein of unknown function DUF559 IPN28_09690 IPR000825 SUF system FeS cluster assembly, SufBD IPN28_09690 IPR037284 SUF system FeS cluster assembly, SufBD superfamily IPN28_09690 IPR011542 SUF system FeS cluster assembly, SufD IPN28_09700 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_09700 IPR010230 FeS cluster assembly SUF system, ATPase SufC IPN28_09700 IPR017871 ABC transporter, conserved site IPN28_09700 IPR003439 ABC transporter-like IPN28_09700 IPR003593 AAA+ ATPase domain IPN28_09715 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily IPN28_09715 IPR001533 Pterin 4 alpha carbinolamine dehydratase IPN28_09730 IPR010231 SUF system FeS cluster assembly, SufB IPN28_09730 IPR000825 SUF system FeS cluster assembly, SufBD IPN28_09730 IPR037284 SUF system FeS cluster assembly, SufBD superfamily IPN28_09735 IPR010242 Transcription factor HTH, IscR IPN28_09735 IPR030489 Transcription regulator Rrf2-type, conserved site IPN28_09735 IPR000944 Transcription regulator Rrf2-type IPN28_09735 IPR036390 Winged helix DNA-binding domain superfamily IPN28_09735 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_09745 IPR032090 Peptide chain release factor 3, C-terminal IPN28_09745 IPR004548 Peptide chain release factor 3 IPN28_09745 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_09745 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_09745 IPR000795 Transcription factor, GTP-binding domain IPN28_09745 IPR005225 Small GTP-binding protein domain IPN28_09745 IPR041732 Peptide chain release factor 3, GTP-binding domain IPN28_09745 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily IPN28_09745 IPR004161 Translation elongation factor EFTu-like, domain 2 IPN28_09745 IPR031157 Tr-type G domain, conserved site IPN28_09745 IPR035647 EF-G domain III/V-like IPN28_09765 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_09765 IPR002481 Ferric-uptake regulator IPN28_09765 IPR036390 Winged helix DNA-binding domain superfamily IPN28_09770 IPR035965 PAS domain superfamily IPN28_09770 IPR013767 PAS fold IPN28_09770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_09770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_09770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_09770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_09770 IPR000014 PAS domain IPN28_09770 IPR005467 Histidine kinase domain IPN28_09770 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_09780 IPR004803 tRNA-guanine transglycosylase IPN28_09780 IPR002616 tRNA-guanine(15) transglycosylase-like IPN28_09780 IPR036511 Queuine tRNA-ribosyltransferase-like IPN28_09785 IPR001383 Ribosomal protein L28 IPN28_09785 IPR037147 Ribosomal protein L28/L24 superfamily IPN28_09785 IPR026569 Ribosomal protein L28/L24 IPN28_09785 IPR034704 L28p-like IPN28_09790 IPR004485 Cobalamin biosynthesis CobD/CbiB IPN28_09805 IPR037027 YqgF/RNase H-like domain superfamily IPN28_09805 IPR006641 YqgF/RNase H-like domain IPN28_09805 IPR005227 Putative pre-16S rRNA nuclease IPN28_09805 IPR012337 Ribonuclease H-like superfamily IPN28_09810 IPR003837 Glu-tRNAGln amidotransferase C subunit IPN28_09810 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C IPN28_09820 IPR036928 Amidase signature (AS) superfamily IPN28_09820 IPR023631 Amidase signature domain IPN28_09820 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit IPN28_09820 IPR000120 Amidase IPN28_09820 IPR020556 Amidase, conserved site IPN28_09830 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic IPN28_09830 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IPN28_09830 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site IPN28_09830 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 IPN28_09830 IPR018027 Asn/Gln amidotransferase IPN28_09830 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like IPN28_09830 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit IPN28_09830 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 IPN28_09830 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E IPN28_09835 IPR003325 TerD domain IPN28_09870 IPR013815 ATP-grasp fold, subdomain 1 IPN28_09870 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase IPN28_09870 IPR011761 ATP-grasp fold IPN28_09870 IPR016185 Pre-ATP-grasp domain superfamily IPN28_09870 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type IPN28_09870 IPR001509 NAD-dependent epimerase/dehydratase IPN28_09880 IPR002059 Cold-shock protein, DNA-binding IPN28_09880 IPR012340 Nucleic acid-binding, OB-fold IPN28_09880 IPR011129 Cold shock domain IPN28_09880 IPR019844 Cold-shock (CSD) domain IPN28_09880 IPR012156 Cold shock, CspA IPN28_09895 IPR010617 Endosomal/lysomomal potassium channel TMEM175 IPN28_09905 IPR007816 ResB-like domain IPN28_09905 IPR002541 Cytochrome c assembly protein IPN28_09910 IPR013740 Redoxin IPN28_09910 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE IPN28_09910 IPR013766 Thioredoxin domain IPN28_09910 IPR017937 Thioredoxin, conserved site IPN28_09910 IPR036249 Thioredoxin-like superfamily IPN28_09915 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal IPN28_09915 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B IPN28_09915 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal IPN28_09915 IPR023042 Peptidase M17, leucine aminopeptidase IPN28_09920 IPR036615 Mur ligase, C-terminal domain superfamily IPN28_09920 IPR013221 Mur ligase, central IPN28_09920 IPR036565 Mur-like, catalytic domain superfamily IPN28_09920 IPR000713 Mur ligase, N-terminal catalytic domain IPN28_09920 IPR005758 UDP-N-acetylmuramate--L-alanine ligase IPN28_09920 IPR004101 Mur ligase, C-terminal IPN28_09930 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_09930 IPR019489 Clp ATPase, C-terminal IPN28_09930 IPR003593 AAA+ ATPase domain IPN28_09930 IPR036628 Clp, N-terminal domain superfamily IPN28_09930 IPR003959 ATPase, AAA-type, core IPN28_09930 IPR017730 Chaperonin ClpB IPN28_09930 IPR041546 ClpA/ClpB, AAA lid domain IPN28_09930 IPR004176 Clp, N-terminal IPN28_09930 IPR001270 ClpA/B family IPN28_09930 IPR028299 ClpA/B, conserved site 2 IPN28_09930 IPR018368 ClpA/B, conserved site 1 IPN28_09940 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific IPN28_09940 IPR040758 Release factor glutamine methyltransferase, N-terminal domain IPN28_09940 IPR004556 Methyltransferase HemK-like IPN28_09940 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPN28_09940 IPR007848 Methyltransferase small domain IPN28_09940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_09945 IPR005139 Peptide chain release factor IPN28_09945 IPR000352 Peptide chain release factor class I IPN28_09945 IPR004373 Peptide chain release factor 1 IPN28_09955 IPR041740 Aspartokinase catalytic domain IPN28_09955 IPR018042 Aspartate kinase, conserved site IPN28_09955 IPR027795 CASTOR, ACT domain IPN28_09955 IPR002912 ACT domain IPN28_09955 IPR036393 Acetylglutamate kinase-like superfamily IPN28_09955 IPR005260 Aspartate kinase, monofunctional class IPN28_09955 IPR001048 Aspartate/glutamate/uridylate kinase IPN28_09955 IPR001341 Aspartate kinase IPN28_09960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_09960 IPR010233 Ubiquinone biosynthesis O-methyltransferase IPN28_09975 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal IPN28_09975 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site IPN28_09975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_09975 IPR012255 Electron transfer flavoprotein, beta subunit IPN28_09975 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal IPN28_09980 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal IPN28_09980 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal IPN28_09980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_09980 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site IPN28_09980 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal IPN28_09980 IPR029035 DHS-like NAD/FAD-binding domain superfamily IPN28_09980 IPR001308 Electron transfer flavoprotein alpha subunit/FixB IPN28_09990 IPR013766 Thioredoxin domain IPN28_09990 IPR017937 Thioredoxin, conserved site IPN28_09990 IPR013740 Redoxin IPN28_09990 IPR036249 Thioredoxin-like superfamily IPN28_10000 IPR029066 PLP-binding barrel IPN28_10000 IPR000183 Ornithine/DAP/Arg decarboxylase IPN28_10000 IPR002986 Diaminopimelate decarboxylase, LysA IPN28_10000 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal IPN28_10000 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IPN28_10000 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal IPN28_10020 IPR005286 Cell division protein FtsE, ATP-binding IPN28_10020 IPR017871 ABC transporter, conserved site IPN28_10020 IPR003593 AAA+ ATPase domain IPN28_10020 IPR003439 ABC transporter-like IPN28_10020 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10040 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPN28_10040 IPR003099 Prephenate dehydrogenase IPN28_10040 IPR036291 NAD(P)-binding domain superfamily IPN28_10045 IPR002912 ACT domain IPN28_10045 IPR002701 Chorismate mutase II, prokaryotic-type IPN28_10045 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain IPN28_10045 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase IPN28_10045 IPR036979 Chorismate mutase domain superfamily IPN28_10045 IPR036263 Chorismate mutase type II superfamily IPN28_10045 IPR018528 Prephenate dehydratase, conserved site IPN28_10045 IPR001086 Prephenate dehydratase IPN28_10050 IPR033752 MetA family IPN28_10050 IPR029062 Class I glutamine amidotransferase-like IPN28_10055 IPR023576 UbiE/COQ5 methyltransferase, conserved site IPN28_10055 IPR004033 UbiE/COQ5 methyltransferase IPN28_10055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_10060 IPR003561 Mutator MutT IPN28_10060 IPR020476 NUDIX hydrolase IPN28_10060 IPR000086 NUDIX hydrolase domain IPN28_10060 IPR015797 NUDIX hydrolase-like domain superfamily IPN28_10060 IPR020084 NUDIX hydrolase, conserved site IPN28_10065 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site IPN28_10065 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type IPN28_10070 IPR036670 SecA, preprotein cross-linking domain superfamily IPN28_10070 IPR020937 SecA conserved site IPN28_10070 IPR000185 Protein translocase subunit SecA IPN28_10070 IPR036266 SecA, Wing/Scaffold superfamily IPN28_10070 IPR011116 SecA Wing/Scaffold IPN28_10070 IPR011130 SecA, preprotein cross-linking domain IPN28_10070 IPR011115 SecA DEAD-like, N-terminal IPN28_10070 IPR014018 SecA motor DEAD IPN28_10070 IPR004027 SEC-C motif IPN28_10070 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10075 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_10075 IPR006076 FAD dependent oxidoreductase IPN28_10080 IPR020471 Aldo/keto reductase IPN28_10080 IPR023210 NADP-dependent oxidoreductase domain IPN28_10080 IPR036812 NADP-dependent oxidoreductase domain superfamily IPN28_10085 IPR030963 3-dehydroquinate synthase family IPN28_10085 IPR030960 3-dehydroquinate synthase domain IPN28_10085 IPR016037 3-dehydroquinate synthase AroB IPN28_10090 IPR031322 Shikimate kinase/gluconokinase IPN28_10090 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10090 IPR000623 Shikimate kinase/Threonine synthase-like 1 IPN28_10090 IPR023000 Shikimate kinase, conserved site IPN28_10105 IPR002104 Integrase, catalytic domain IPN28_10105 IPR010998 Integrase/recombinase, N-terminal IPN28_10105 IPR013762 Integrase-like, catalytic domain superfamily IPN28_10105 IPR004107 Integrase, SAM-like, N-terminal IPN28_10105 IPR011932 Tyrosine recombinase XerD IPN28_10105 IPR023009 Tyrosine recombinase XerC/XerD IPN28_10105 IPR011010 DNA breaking-rejoining enzyme, catalytic core IPN28_10110 IPR001095 Acetyl-CoA carboxylase, alpha subunit IPN28_10110 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal IPN28_10110 IPR029045 ClpP/crotonase-like domain superfamily IPN28_10125 IPR001623 DnaJ domain IPN28_10125 IPR036869 Chaperone J-domain superfamily IPN28_10130 IPR013615 CbbQ/NirQ/NorQ, C-terminal IPN28_10130 IPR025865 Cobaltochelatase subunit CobS N-terminal domain IPN28_10130 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10130 IPR006537 Cobaltochelatase subunit CobS IPN28_10130 IPR011704 ATPase, dynein-related, AAA domain IPN28_10140 IPR036465 von Willebrand factor A-like domain superfamily IPN28_10140 IPR025861 Cobalamin biosynthesis protein CobT VWA domain IPN28_10140 IPR002035 von Willebrand factor, type A IPN28_10140 IPR006538 Cobalt chelatase, CobT subunit IPN28_10145 IPR002569 Peptide methionine sulphoxide reductase MsrA IPN28_10145 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily IPN28_10160 IPR015807 Histidine-tRNA ligase IPN28_10160 IPR004154 Anticodon-binding IPN28_10160 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit IPN28_10160 IPR036621 Anticodon-binding domain superfamily IPN28_10160 IPR006195 Aminoacyl-tRNA synthetase, class II IPN28_10160 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain IPN28_10175 IPR003808 Fe-S metabolism associated domain, SufE-like IPN28_10180 IPR003593 AAA+ ATPase domain IPN28_10180 IPR003959 ATPase, AAA-type, core IPN28_10180 IPR019489 Clp ATPase, C-terminal IPN28_10180 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10180 IPR038366 Zinc finger, ClpX C4-type superfamily IPN28_10180 IPR010603 Zinc finger, ClpX C4-type IPN28_10180 IPR004487 Clp protease, ATP-binding subunit ClpX IPN28_10205 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_10205 IPR001173 Glycosyltransferase 2-like IPN28_10220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_10220 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily IPN28_10220 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily IPN28_10220 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain IPN28_10220 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal IPN28_10220 IPR006050 DNA photolyase, N-terminal IPN28_10220 IPR002081 Cryptochrome/DNA photolyase class 1 IPN28_10225 IPR040449 LD-carboxypeptidase, N-terminal IPN28_10225 IPR003507 Peptidase family S66 IPN28_10225 IPR040921 LD-carboxypeptidase, C-terminal IPN28_10225 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal IPN28_10225 IPR029062 Class I glutamine amidotransferase-like IPN28_10225 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily IPN28_10240 IPR030873 Beta-barrel assembly-enhancing protease IPN28_10240 IPR011990 Tetratricopeptide-like helical domain superfamily IPN28_10240 IPR001915 Peptidase M48 IPN28_10240 IPR011716 Tetratricopeptide TPR-3 IPN28_10250 IPR005944 Proline iminopeptidase IPN28_10250 IPR002410 Peptidase S33 IPN28_10250 IPR000073 Alpha/beta hydrolase fold-1 IPN28_10250 IPR029058 Alpha/Beta hydrolase fold IPN28_10255 IPR036043 Phosphoglycerate kinase superfamily IPN28_10255 IPR001576 Phosphoglycerate kinase IPN28_10255 IPR015911 Phosphoglycerate kinase, conserved site IPN28_10255 IPR015824 Phosphoglycerate kinase, N-terminal IPN28_10270 IPR035994 Nucleoside phosphorylase superfamily IPN28_10270 IPR000845 Nucleoside phosphorylase domain IPN28_10270 IPR018953 AMP nucleoside phosphorylase, N-terminal IPN28_10270 IPR011271 AMP nucleosidase IPN28_10270 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily IPN28_10275 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IPN28_10275 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily IPN28_10275 IPR013822 Signal recognition particle SRP54, helical bundle IPN28_10275 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10275 IPR003593 AAA+ ATPase domain IPN28_10275 IPR036225 SRP/SRP receptor, N-terminal IPN28_10275 IPR004390 Signal-recognition particle receptor FtsY IPN28_10280 IPR023404 Radical SAM, alpha/beta horseshoe IPN28_10280 IPR006638 Elp3/MiaB/NifB IPN28_10280 IPR005839 Methylthiotransferase IPN28_10280 IPR038135 Methylthiotransferase, N-terminal domain superfamily IPN28_10280 IPR013848 Methylthiotransferase, N-terminal IPN28_10280 IPR006467 MiaB-like tRNA modifying enzyme IPN28_10280 IPR007197 Radical SAM IPN28_10280 IPR020612 Methylthiotransferase, conserved site IPN28_10290 IPR018510 Diaminopimelate epimerase, active site IPN28_10290 IPR001653 Diaminopimelate epimerase, DapF IPN28_10295 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily IPN28_10295 IPR013822 Signal recognition particle SRP54, helical bundle IPN28_10295 IPR004780 Signal recognition particle protein IPN28_10295 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily IPN28_10295 IPR022941 Signal recognition particle, SRP54 subunit IPN28_10295 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain IPN28_10295 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10295 IPR003593 AAA+ ATPase domain IPN28_10295 IPR004125 Signal recognition particle, SRP54 subunit, M-domain IPN28_10300 IPR000307 Ribosomal protein S16 IPN28_10300 IPR023803 Ribosomal protein S16 domain superfamily IPN28_10300 IPR020592 Ribosomal protein S16, conserved site IPN28_10305 IPR009000 Translation protein, beta-barrel domain superfamily IPN28_10305 IPR027275 PRC-barrel domain IPN28_10305 IPR011961 16S rRNA processing protein RimM IPN28_10305 IPR011033 PRC-barrel-like superfamily IPN28_10305 IPR036976 RimM, N-terminal domain superfamily IPN28_10305 IPR002676 RimM, N-terminal IPN28_10310 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria IPN28_10310 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal IPN28_10310 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal IPN28_10310 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain IPN28_10310 IPR029028 Alpha/beta knot methyltransferases IPN28_10315 IPR038657 Ribosomal protein L19 superfamily IPN28_10315 IPR001857 Ribosomal protein L19 IPN28_10315 IPR018257 Ribosomal protein L19, conserved site IPN28_10315 IPR008991 Translation protein SH3-like domain superfamily IPN28_10330 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain IPN28_10330 IPR036008 Aconitase, iron-sulfur domain IPN28_10330 IPR033941 3-Isopropylmalate dehydratase, catalytic domain IPN28_10330 IPR004430 3-isopropylmalate dehydratase, large subunit IPN28_10330 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IPN28_10330 IPR018136 Aconitase family, 4Fe-4S cluster binding site IPN28_10345 IPR004431 3-isopropylmalate dehydratase, small subunit IPN28_10345 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IPN28_10345 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain IPN28_10345 IPR033940 3-isopropylmalate dehydratase, swivel domain IPN28_10350 IPR024084 Isopropylmalate dehydrogenase-like domain IPN28_10350 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site IPN28_10350 IPR004429 Isopropylmalate dehydrogenase IPN28_10360 IPR001972 Stomatin family IPN28_10360 IPR036013 Band 7/SPFH domain superfamily IPN28_10360 IPR018080 Band 7/stomatin-like, conserved site IPN28_10360 IPR001107 Band 7 domain IPN28_10360 IPR032435 Band 7, C-terminal extension IPN28_10370 IPR009057 Homeobox-like domain superfamily IPN28_10370 IPR011051 RmlC-like cupin domain superfamily IPN28_10370 IPR020449 Transcription regulator HTH, AraC- type IPN28_10370 IPR018062 HTH domain AraC-type, conserved site IPN28_10370 IPR014710 RmlC-like jelly roll fold IPN28_10370 IPR013096 Cupin 2, conserved barrel IPN28_10370 IPR018060 DNA binding HTH domain, AraC-type IPN28_10385 IPR001775 GspD/PilQ family IPN28_10385 IPR004845 Type II secretion system GspD, conserved site IPN28_10385 IPR013356 Type II secretion system GspD IPN28_10385 IPR004846 Type II/III secretion system IPN28_10385 IPR038591 NolW-like superfamily IPN28_10385 IPR005644 NolW-like IPN28_10390 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10390 IPR001482 Type II/IV secretion system protein IPN28_10390 IPR006321 Pilus retraction protein PilT IPN28_10395 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10395 IPR006321 Pilus retraction protein PilT IPN28_10395 IPR003593 AAA+ ATPase domain IPN28_10395 IPR001482 Type II/IV secretion system protein IPN28_10400 IPR014032 Peptidase A24A, prepilin type IV, bacterial IPN28_10400 IPR010627 Peptidase A24A, N-terminal IPN28_10400 IPR000045 Prepilin type IV endopeptidase, peptidase domain IPN28_10410 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10410 IPR003439 ABC transporter-like IPN28_10410 IPR003593 AAA+ ATPase domain IPN28_10410 IPR017871 ABC transporter, conserved site IPN28_10430 IPR042094 Type II secretion system F domain superfamily IPN28_10430 IPR018076 Type II secretion system F domain IPN28_10430 IPR003004 GspF/PilC family IPN28_10435 IPR007831 General secretory system II, protein E, N-terminal IPN28_10435 IPR001482 Type II/IV secretion system protein IPN28_10435 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10435 IPR037257 General secretory system II, protein E, N-terminal superfamily IPN28_10435 IPR003593 AAA+ ATPase domain IPN28_10435 IPR013374 ATPase, type IV, pilus assembly, PilB IPN28_10435 IPR042181 Type II secretion system, protein E, N-terminal IPN28_10440 IPR036651 Glutamine synthetase, N-terminal domain superfamily IPN28_10440 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain IPN28_10440 IPR008146 Glutamine synthetase, catalytic domain IPN28_10440 IPR027303 Glutamine synthetase, glycine-rich site IPN28_10440 IPR027302 Glutamine synthetase, N-terminal conserved site IPN28_10440 IPR008147 Glutamine synthetase, beta-Grasp domain IPN28_10480 IPR026669 Arsenite methyltransferase-like IPN28_10480 IPR013216 Methyltransferase type 11 IPN28_10480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_10490 IPR011890 Structural maintenance of chromosomes protein, prokaryotic IPN28_10490 IPR036277 SMCs flexible hinge superfamily IPN28_10490 IPR003395 RecF/RecN/SMC, N-terminal IPN28_10490 IPR010935 SMCs flexible hinge IPN28_10490 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_10490 IPR024704 Structural maintenance of chromosomes protein IPN28_10495 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_10495 IPR007631 RNA polymerase sigma factor 70, non-essential domain IPN28_10495 IPR007127 RNA polymerase sigma factor 70, region 1.1 IPN28_10495 IPR013325 RNA polymerase sigma factor, region 2 IPN28_10495 IPR013324 RNA polymerase sigma factor, region 3/4-like IPN28_10495 IPR007630 RNA polymerase sigma-70 region 4 IPN28_10495 IPR012760 RNA polymerase sigma factor RpoD, C-terminal IPN28_10495 IPR028630 RNA polymerase sigma factor RpoD IPN28_10495 IPR042189 Sigma-70 factor, region 1.1 superfamily IPN28_10495 IPR007624 RNA polymerase sigma-70 region 3 IPN28_10495 IPR007627 RNA polymerase sigma-70 region 2 IPN28_10495 IPR009042 RNA polymerase sigma-70 region 1.2 IPN28_10495 IPR000943 RNA polymerase sigma-70 IPN28_10495 IPR014284 RNA polymerase sigma-70 like domain IPN28_10500 IPR013264 DNA primase, catalytic core, N-terminal IPN28_10500 IPR006171 TOPRIM domain IPN28_10500 IPR034151 Bacterial DnaG primase, TOPRIM domain IPN28_10500 IPR030846 DNA primase DnaG, bacteria IPN28_10500 IPR036977 DNA Primase, CHC2-type zinc finger IPN28_10500 IPR002694 Zinc finger, CHC2-type IPN28_10500 IPR013173 DNA primase DnaG, DnaB-binding domain IPN28_10500 IPR006295 DNA primase, DnaG IPN28_10500 IPR019475 DNA primase, DnaB-helicase binding domain IPN28_10500 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily IPN28_10500 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal IPN28_10505 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 IPN28_10505 IPR042184 YqeY/Aim41, N-terminal domain IPN28_10505 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like IPN28_10505 IPR019004 Uncharacterised protein YqeY/Aim41 IPN28_10510 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily IPN28_10510 IPR017926 Glutamine amidotransferase IPN28_10510 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain IPN28_10510 IPR029062 Class I glutamine amidotransferase-like IPN28_10510 IPR006274 Carbamoyl-phosphate synthase, small subunit IPN28_10510 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain IPN28_10525 IPR011607 Methylglyoxal synthase-like domain IPN28_10525 IPR016185 Pre-ATP-grasp domain superfamily IPN28_10525 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain IPN28_10525 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain IPN28_10525 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily IPN28_10525 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain IPN28_10525 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain IPN28_10525 IPR006275 Carbamoyl-phosphate synthase, large subunit IPN28_10525 IPR011761 ATP-grasp fold IPN28_10525 IPR036914 Methylglyoxal synthase-like domain superfamily IPN28_10530 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily IPN28_10530 IPR023459 Transcription elongation factor GreA/GreB family IPN28_10530 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily IPN28_10530 IPR018151 Transcription elongation factor, GreA/GreB, conserved site IPN28_10530 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal IPN28_10530 IPR006359 Transcription elongation factor GreA IPN28_10530 IPR028624 Transcription elongation factor GreA/GreB IPN28_10530 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal IPN28_10545 IPR019833 Manganese/iron superoxide dismutase, binding site IPN28_10545 IPR019832 Manganese/iron superoxide dismutase, C-terminal IPN28_10545 IPR019831 Manganese/iron superoxide dismutase, N-terminal IPN28_10545 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily IPN28_10545 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily IPN28_10545 IPR001189 Manganese/iron superoxide dismutase IPN28_10560 IPR007523 NDUFAF3/Mth938 domain-containing protein IPN28_10560 IPR036748 MTH938-like superfamily IPN28_10565 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IPN28_10565 IPR005665 Protein-export membrane protein SecF, bacterial IPN28_10565 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IPN28_10565 IPR000731 Sterol-sensing domain IPN28_10565 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site IPN28_10570 IPR001036 Acriflavin resistance protein IPN28_10570 IPR005791 Protein translocase subunit SecD IPN28_10570 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial IPN28_10570 IPR022645 Protein-export membrane protein SecD/SecF, bacterial IPN28_10575 IPR003849 Preprotein translocase YajC IPN28_10590 IPR018392 LysM domain IPN28_10590 IPR011055 Duplicated hybrid motif IPN28_10590 IPR016047 Peptidase M23 IPN28_10590 IPR036779 LysM domain superfamily IPN28_10595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_10595 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase IPN28_10605 IPR002317 Serine-tRNA ligase, type1 IPN28_10605 IPR015866 Serine-tRNA synthetase, type1, N-terminal IPN28_10605 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IPN28_10605 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily IPN28_10605 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm IPN28_10605 IPR006195 Aminoacyl-tRNA synthetase, class II IPN28_10605 IPR033729 Serine-tRNA ligase catalytic core domain IPN28_10620 IPR020605 Octanoyltransferase, conserved site IPN28_10620 IPR000544 Octanoyltransferase IPN28_10620 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain IPN28_10630 IPR036291 NAD(P)-binding domain superfamily IPN28_10630 IPR012188 NAD(P)-dependent malic enzyme IPN28_10630 IPR012301 Malic enzyme, N-terminal domain IPN28_10630 IPR037062 Malic enzyme, N-terminal domain superfamily IPN28_10630 IPR042113 Phosphate acetyltransferase, domain 1 IPN28_10630 IPR015884 Malic enzyme, conserved site IPN28_10630 IPR042112 Phosphate acetyltransferase, domain 2 IPN28_10630 IPR002505 Phosphate acetyl/butaryl transferase IPN28_10630 IPR012302 Malic enzyme, NAD-binding IPN28_10635 IPR038048 Magnesium transporter MgtE, transmembrane domain IPN28_10635 IPR006668 Magnesium transporter, MgtE intracellular domain IPN28_10635 IPR038076 MgtE, N-terminal domain superfamily IPN28_10635 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily IPN28_10635 IPR006669 Magnesium transporter MgtE IPN28_10635 IPR006667 SLC41 divalent cation transporters, integral membrane domain IPN28_10635 IPR000644 CBS domain IPN28_10640 IPR001460 Penicillin-binding protein, transpeptidase IPN28_10640 IPR036950 Penicillin binding protein transglycosylase domain IPN28_10640 IPR023346 Lysozyme-like domain superfamily IPN28_10640 IPR001264 Glycosyl transferase, family 51 IPN28_10640 IPR012338 Beta-lactamase/transpeptidase-like IPN28_10645 IPR022892 Ribonuclease HI IPN28_10645 IPR012337 Ribonuclease H-like superfamily IPN28_10645 IPR002156 Ribonuclease H domain IPN28_10645 IPR036397 Ribonuclease H superfamily IPN28_10650 IPR005280 Homoserine kinase, type II IPN28_10650 IPR011009 Protein kinase-like domain superfamily IPN28_10650 IPR002575 Aminoglycoside phosphotransferase IPN28_10655 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IPN28_10665 IPR001347 Sugar isomerase (SIS) IPN28_10665 IPR004515 Phosphoheptose isomerase IPN28_10665 IPR035461 GmhA/DiaA IPN28_10670 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) IPN28_10670 IPR029052 Metallo-dependent phosphatase-like IPN28_10670 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type IPN28_10675 IPR037004 Exonuclease VII, small subunit superfamily IPN28_10675 IPR003761 Exonuclease VII, small subunit IPN28_10680 IPR033749 Polyprenyl synthetase, conserved site IPN28_10680 IPR008949 Isoprenoid synthase domain superfamily IPN28_10680 IPR000092 Polyprenyl synthetase IPN28_10695 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II IPN28_10695 IPR005474 Transketolase, N-terminal IPN28_10695 IPR033248 Transketolase, C-terminal domain IPN28_10695 IPR005475 Transketolase-like, pyrimidine-binding domain IPN28_10695 IPR005477 Deoxyxylulose-5-phosphate synthase IPN28_10695 IPR029061 Thiamin diphosphate-binding fold IPN28_10705 IPR029045 ClpP/crotonase-like domain superfamily IPN28_10705 IPR004634 Peptidase S49, protease IV IPN28_10705 IPR004635 Peptidase S49, SppA IPN28_10705 IPR002142 Peptidase S49 IPN28_10705 IPR033854 Signal peptide peptidase A IPN28_10710 IPR002563 Flavin reductase like domain IPN28_10710 IPR012349 FMN-binding split barrel IPN28_10715 IPR020541 Chorismate synthase, conserved site IPN28_10715 IPR000453 Chorismate synthase IPN28_10715 IPR035904 Chorismate synthase AroC superfamily IPN28_10730 IPR029069 HotDog domain superfamily IPN28_10730 IPR003736 Phenylacetic acid degradation-related domain IPN28_10730 IPR006683 Thioesterase domain IPN28_10730 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI IPN28_10740 IPR002347 Short-chain dehydrogenase/reductase SDR IPN28_10740 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) IPN28_10740 IPR036291 NAD(P)-binding domain superfamily IPN28_10750 IPR016364 Surface antigen, Rickettsia type IPN28_10750 IPR008816 Glycine zipper 2TM domain IPN28_10750 IPR032635 Surface antigen domain IPN28_10755 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site IPN28_10755 IPR000659 Pyridoxamine 5'-phosphate oxidase IPN28_10755 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative IPN28_10755 IPR012349 FMN-binding split barrel IPN28_10755 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal IPN28_10760 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_10760 IPR020575 Heat shock protein Hsp90, N-terminal IPN28_10760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_10760 IPR019805 Heat shock protein Hsp90, conserved site IPN28_10760 IPR037196 HSP90, C-terminal domain IPN28_10760 IPR001404 Heat shock protein Hsp90 family IPN28_10760 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_10785 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase IPN28_10785 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site IPN28_10785 IPR004839 Aminotransferase, class I/classII IPN28_10785 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_10785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_10785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_10805 IPR011611 Carbohydrate kinase PfkB IPN28_10805 IPR029056 Ribokinase-like IPN28_10805 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site IPN28_10815 IPR002589 Macro domain IPN28_10820 IPR039424 Solute-binding protein family 5 IPN28_10820 IPR000914 Solute-binding protein family 5 domain IPN28_10820 IPR030678 Peptide/nickel binding protein, MppA-type IPN28_10835 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal IPN28_10835 IPR023758 tRNA-modifying protein YgfZ IPN28_10835 IPR017703 YgfZ/GcvT conserved site IPN28_10845 IPR013815 ATP-grasp fold, subdomain 1 IPN28_10845 IPR008279 PEP-utilising enzyme, mobile domain IPN28_10845 IPR018274 PEP-utilising enzyme, active site IPN28_10845 IPR000121 PEP-utilising enzyme, C-terminal IPN28_10845 IPR023151 PEP-utilising enzyme, conserved site IPN28_10845 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding IPN28_10845 IPR010121 Pyruvate, phosphate dikinase IPN28_10845 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily IPN28_10845 IPR040442 Pyruvate kinase-like domain superfamily IPN28_10845 IPR036637 Phosphohistidine domain superfamily IPN28_10860 IPR000092 Polyprenyl synthetase IPN28_10860 IPR033749 Polyprenyl synthetase, conserved site IPN28_10860 IPR008949 Isoprenoid synthase domain superfamily IPN28_10885 IPR034505 Anaerobic coproporphyrinogen-III oxidase IPN28_10885 IPR004559 Heme chaperone HemW-like IPN28_10885 IPR007197 Radical SAM IPN28_10885 IPR023404 Radical SAM, alpha/beta horseshoe IPN28_10885 IPR010723 HemN, C-terminal IPN28_10885 IPR006638 Elp3/MiaB/NifB IPN28_10895 IPR029001 Inosine triphosphate pyrophosphatase-like IPN28_10895 IPR002637 Ham1-like protein IPN28_10895 IPR020922 dITP/XTP pyrophosphatase IPN28_10900 IPR036345 Exoribonuclease, PH domain 2 superfamily IPN28_10900 IPR018336 Ribonuclease PH, conserved site IPN28_10900 IPR002381 Ribonuclease PH, bacterial-type IPN28_10900 IPR001247 Exoribonuclease, phosphorolytic domain 1 IPN28_10900 IPR027408 PNPase/RNase PH domain superfamily IPN28_10900 IPR015847 Exoribonuclease, phosphorolytic domain 2 IPN28_10900 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_10905 IPR029016 GAF-like domain superfamily IPN28_10905 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal IPN28_10905 IPR036390 Winged helix DNA-binding domain superfamily IPN28_10905 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_10905 IPR002571 Heat-inducible transcription repressor HrcA IPN28_10905 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily IPN28_10915 IPR009012 GrpE nucleotide exchange factor, head IPN28_10915 IPR013805 GrpE nucleotide exchange factor, coiled-coil IPN28_10915 IPR000740 GrpE nucleotide exchange factor IPN28_10920 IPR013126 Heat shock protein 70 family IPN28_10920 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily IPN28_10920 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily IPN28_10920 IPR012725 Chaperone DnaK IPN28_10920 IPR018181 Heat shock protein 70, conserved site IPN28_10925 IPR018253 DnaJ domain, conserved site IPN28_10925 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily IPN28_10925 IPR001305 Heat shock protein DnaJ, cysteine-rich domain IPN28_10925 IPR008971 HSP40/DnaJ peptide-binding IPN28_10925 IPR001623 DnaJ domain IPN28_10925 IPR036869 Chaperone J-domain superfamily IPN28_10925 IPR002939 Chaperone DnaJ, C-terminal IPN28_10925 IPR012724 Chaperone DnaJ IPN28_10930 IPR022663 Dihydrodipicolinate reductase, C-terminal IPN28_10930 IPR023940 Dihydrodipicolinate reductase IPN28_10930 IPR022664 Dihydrodipicolinate reductase, conserved site IPN28_10930 IPR000846 Dihydrodipicolinate reductase, N-terminal IPN28_10930 IPR036291 NAD(P)-binding domain superfamily IPN28_10940 IPR001789 Signal transduction response regulator, receiver domain IPN28_10940 IPR011110 Two component regulator propeller IPN28_10940 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily IPN28_10940 IPR013783 Immunoglobulin-like fold IPN28_10940 IPR018062 HTH domain AraC-type, conserved site IPN28_10940 IPR018060 DNA binding HTH domain, AraC-type IPN28_10940 IPR009057 Homeobox-like domain superfamily IPN28_10940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_10940 IPR015943 WD40/YVTN repeat-like-containing domain superfamily IPN28_10940 IPR011006 CheY-like superfamily IPN28_10940 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_10940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_10940 IPR011123 Two component regulator three Y IPN28_10940 IPR005467 Histidine kinase domain IPN28_10940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_10940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_10945 IPR001867 OmpR/PhoB-type DNA-binding domain IPN28_10945 IPR001789 Signal transduction response regulator, receiver domain IPN28_10945 IPR016032 Signal transduction response regulator, C-terminal effector IPN28_10945 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_10945 IPR011006 CheY-like superfamily IPN28_10945 IPR039420 Transcriptional regulatory protein WalR-like IPN28_10950 IPR016221 Bifunctional regulatory protein Ada IPN28_10950 IPR018060 DNA binding HTH domain, AraC-type IPN28_10950 IPR018062 HTH domain AraC-type, conserved site IPN28_10950 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site IPN28_10950 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding IPN28_10950 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_10950 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily IPN28_10950 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain IPN28_10950 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain IPN28_10950 IPR004026 Ada DNA repair, metal-binding IPN28_10950 IPR009057 Homeobox-like domain superfamily IPN28_10950 IPR035451 Ada-like domain superfamily IPN28_10955 IPR003265 HhH-GPD domain IPN28_10955 IPR004036 Endonuclease III-like, conserved site-2 IPN28_10955 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif IPN28_10955 IPR004035 Endonuclease III, iron-sulphur binding site IPN28_10955 IPR005759 Endonuclease III IPN28_10955 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal IPN28_10955 IPR000445 Helix-hairpin-helix motif IPN28_10955 IPR011257 DNA glycosylase IPN28_10975 IPR000305 GIY-YIG endonuclease IPN28_10975 IPR035901 GIY-YIG endonuclease superfamily IPN28_10975 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 IPN28_10975 IPR010994 RuvA domain 2-like IPN28_10975 IPR001943 UVR domain IPN28_10975 IPR036876 UVR domain superfamily IPN28_10975 IPR041663 DisA/LigA, helix-hairpin-helix motif IPN28_10975 IPR038476 UvrC homology region 2 superfamily IPN28_10975 IPR004791 UvrABC system, subunit C IPN28_10975 IPR001162 UvrC family homology region IPN28_11040 IPR003362 Bacterial sugar transferase IPN28_11040 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase IPN28_11040 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP IPN28_11050 IPR001296 Glycosyl transferase, family 1 IPN28_11050 IPR017814 Mycothiol biosynthesis protein, MshA IPN28_11050 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPN28_11060 IPR007345 Polysaccharide pyruvyl transferase IPN28_11070 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_11070 IPR001173 Glycosyltransferase 2-like IPN28_11075 IPR005804 Fatty acid desaturase domain IPN28_11080 IPR008135 Competence-induced protein CinA IPN28_11080 IPR008136 CinA, C-terminal IPN28_11080 IPR041424 CinA, KH domain IPN28_11080 IPR036653 CinA-like, C-terminal IPN28_11080 IPR001453 MoaB/Mog domain IPN28_11080 IPR036425 MoaB/Mog-like domain superfamily IPN28_11085 IPR001714 Peptidase M24, methionine aminopeptidase IPN28_11085 IPR000994 Peptidase M24 IPN28_11085 IPR036005 Creatinase/aminopeptidase-like IPN28_11085 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 IPN28_11095 IPR001405 Uncharacterised protein family UPF0758 IPN28_11095 IPR010994 RuvA domain 2-like IPN28_11095 IPR025657 RadC-like JAB domain IPN28_11095 IPR037518 MPN domain IPN28_11095 IPR020891 Uncharacterised protein family UPF0758, conserved site IPN28_11100 IPR038063 L,D-transpeptidase catalytic domain-like IPN28_11100 IPR005490 L,D-transpeptidase catalytic domain IPN28_11105 IPR009706 Protein of unknown function DUF1287 IPN28_11110 IPR022761 Fumarate lyase, N-terminal IPN28_11110 IPR024083 Fumarase/histidase, N-terminal IPN28_11110 IPR008948 L-Aspartase-like IPN28_11110 IPR004769 Adenylosuccinate lyase IPN28_11110 IPR019468 Adenylosuccinate lyase C-terminal IPN28_11110 IPR020557 Fumarate lyase, conserved site IPN28_11110 IPR000362 Fumarate lyase family IPN28_11115 IPR009078 Ferritin-like superfamily IPN28_11115 IPR008331 Ferritin/DPS protein domain IPN28_11115 IPR002024 Bacterioferritin IPN28_11115 IPR012347 Ferritin-like IPN28_11115 IPR009040 Ferritin-like diiron domain IPN28_11125 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain IPN28_11125 IPR029000 Cyclophilin-like domain superfamily IPN28_11125 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase IPN28_11125 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site IPN28_11210 IPR001943 UVR domain IPN28_11210 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_11210 IPR041471 UvrB, interaction domain IPN28_11210 IPR014001 Helicase superfamily 1/2, ATP-binding domain IPN28_11210 IPR001650 Helicase, C-terminal IPN28_11210 IPR004807 UvrABC system, subunit B IPN28_11210 IPR036876 UVR domain superfamily IPN28_11210 IPR024759 UvrB, YAD/RRR-motif-containing domain IPN28_11210 IPR006935 Helicase/UvrB, N-terminal IPN28_11230 IPR023386 Lysine-tRNA ligase, insertion domain superfamily IPN28_11230 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding IPN28_11230 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 IPN28_11230 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPN28_11230 IPR002904 Lysine-tRNA ligase IPN28_11230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_11250 IPR014001 Helicase superfamily 1/2, ATP-binding domain IPN28_11250 IPR036397 Ribonuclease H superfamily IPN28_11250 IPR012337 Ribonuclease H-like superfamily IPN28_11250 IPR001650 Helicase, C-terminal IPN28_11250 IPR006555 ATP-dependent helicase, C-terminal IPN28_11250 IPR006310 3'-5' exonuclease DinG IPN28_11250 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_11250 IPR013520 Exonuclease, RNase T/DNA polymerase III IPN28_11250 IPR006935 Helicase/UvrB, N-terminal IPN28_11250 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type IPN28_11250 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain IPN28_11260 IPR019999 Anthranilate synthase component I-like IPN28_11260 IPR005801 ADC synthase IPN28_11260 IPR005802 Aminodeoxychorismate synthase, component I IPN28_11260 IPR006805 Anthranilate synthase component I, N-terminal IPN28_11260 IPR015890 Chorismate-utilising enzyme, C-terminal IPN28_11265 IPR029062 Class I glutamine amidotransferase-like IPN28_11265 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain IPN28_11265 IPR017926 Glutamine amidotransferase IPN28_11270 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG IPN28_11270 IPR031100 LOG family IPN28_11280 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal IPN28_11280 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit IPN28_11280 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal IPN28_11290 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPN28_11290 IPR003593 AAA+ ATPase domain IPN28_11290 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_11290 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal IPN28_11290 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPN28_11290 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily IPN28_11290 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IPN28_11290 IPR005722 ATP synthase, F1 complex, beta subunit IPN28_11300 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily IPN28_11300 IPR000131 ATP synthase, F1 complex, gamma subunit IPN28_11300 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site IPN28_11305 IPR005294 ATP synthase, F1 complex, alpha subunit IPN28_11305 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_11305 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain IPN28_11305 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily IPN28_11305 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPN28_11305 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site IPN28_11305 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain IPN28_11305 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily IPN28_11305 IPR000793 ATP synthase, alpha subunit, C-terminal IPN28_11305 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily IPN28_11310 IPR000711 ATPase, OSCP/delta subunit IPN28_11310 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily IPN28_11310 IPR020781 ATPase, OSCP/delta subunit, conserved site IPN28_11315 IPR008875 TraX IPN28_11340 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily IPN28_11340 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain IPN28_11340 IPR005259 Primosomal protein N' IPN28_11340 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_11340 IPR001650 Helicase, C-terminal IPN28_11340 IPR014001 Helicase superfamily 1/2, ATP-binding domain IPN28_11340 IPR011545 DEAD/DEAH box helicase domain IPN28_11340 IPR041222 Primosomal protein N', 3' DNA-binding domain IPN28_11340 IPR041236 Primosomal protein N, C-terminal domain IPN28_11345 IPR023209 D-amino-acid oxidase IPN28_11345 IPR006076 FAD dependent oxidoreductase IPN28_11360 IPR013785 Aldolase-type TIM barrel IPN28_11360 IPR001585 Transaldolase/Fructose-6-phosphate aldolase IPN28_11360 IPR022999 Transaldolase type 3B, putative IPN28_11360 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase IPN28_11360 IPR018225 Transaldolase, active site IPN28_11360 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial IPN28_11380 IPR023009 Tyrosine recombinase XerC/XerD IPN28_11380 IPR004107 Integrase, SAM-like, N-terminal IPN28_11380 IPR010998 Integrase/recombinase, N-terminal IPN28_11380 IPR002104 Integrase, catalytic domain IPN28_11380 IPR013762 Integrase-like, catalytic domain superfamily IPN28_11380 IPR011010 DNA breaking-rejoining enzyme, catalytic core IPN28_11400 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily IPN28_11400 IPR006258 Dihydrolipoamide dehydrogenase IPN28_11400 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I IPN28_11400 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_11400 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site IPN28_11400 IPR023753 FAD/NAD(P)-binding domain IPN28_11400 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IPN28_11425 IPR000089 Biotin/lipoyl attachment IPN28_11425 IPR006255 Dihydrolipoamide succinyltransferase IPN28_11425 IPR011053 Single hybrid motif IPN28_11425 IPR004167 Peripheral subunit-binding domain IPN28_11425 IPR036625 E3-binding domain superfamily IPN28_11425 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily IPN28_11425 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain IPN28_11425 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site IPN28_11435 IPR036676 PurM-like, C-terminal domain superfamily IPN28_11435 IPR010918 PurM-like, C-terminal domain IPN28_11435 IPR006283 Thiamine-monophosphate kinase IPN28_11435 IPR036921 PurM-like, N-terminal domain superfamily IPN28_11435 IPR016188 PurM-like, N-terminal domain IPN28_11440 IPR029056 Ribokinase-like IPN28_11440 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase IPN28_11440 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase IPN28_11440 IPR013785 Aldolase-type TIM barrel IPN28_11440 IPR034291 Thiamine phosphate synthase IPN28_11440 IPR022998 Thiamine phosphate synthase/TenI IPN28_11440 IPR036206 Thiamin phosphate synthase superfamily IPN28_11445 IPR013785 Aldolase-type TIM barrel IPN28_11445 IPR034291 Thiamine phosphate synthase IPN28_11445 IPR036206 Thiamin phosphate synthase superfamily IPN28_11445 IPR022998 Thiamine phosphate synthase/TenI IPN28_11455 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain IPN28_11455 IPR005475 Transketolase-like, pyrimidine-binding domain IPN28_11455 IPR029061 Thiamin diphosphate-binding fold IPN28_11455 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily IPN28_11455 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal IPN28_11455 IPR001017 Dehydrogenase, E1 component IPN28_11455 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial IPN28_11455 IPR011603 2-oxoglutarate dehydrogenase E1 component IPN28_11480 IPR003781 CoA-binding IPN28_11480 IPR005810 Succinyl-CoA ligase, alpha subunit IPN28_11480 IPR005811 ATP-citrate lyase/succinyl-CoA ligase IPN28_11480 IPR036291 NAD(P)-binding domain superfamily IPN28_11480 IPR016102 Succinyl-CoA synthetase-like IPN28_11480 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site IPN28_11480 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site IPN28_11495 IPR013815 ATP-grasp fold, subdomain 1 IPN28_11495 IPR016102 Succinyl-CoA synthetase-like IPN28_11495 IPR005809 Succinate--CoA synthetase, beta subunit IPN28_11495 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site IPN28_11495 IPR005811 ATP-citrate lyase/succinyl-CoA ligase IPN28_11495 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type IPN28_11495 IPR011761 ATP-grasp fold IPN28_11505 IPR000189 Prokaryotic transglycosylase, active site IPN28_11505 IPR008258 Transglycosylase SLT domain 1 IPN28_11505 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF IPN28_11505 IPR023346 Lysozyme-like domain superfamily IPN28_11505 IPR023703 Membrane-bound lytic murein transglycosylase F IPN28_11515 IPR001557 L-lactate/malate dehydrogenase IPN28_11515 IPR001236 Lactate/malate dehydrogenase, N-terminal IPN28_11515 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPN28_11515 IPR001252 Malate dehydrogenase, active site IPN28_11515 IPR010945 Malate dehydrogenase, type 2 IPN28_11515 IPR036291 NAD(P)-binding domain superfamily IPN28_11515 IPR022383 Lactate/malate dehydrogenase, C-terminal IPN28_11555 IPR030870 Cell division protein ZapE IPN28_11555 IPR005654 ATPase, AFG1-like IPN28_11555 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_11560 IPR019820 Sec-independent periplasmic protein translocase, conserved site IPN28_11560 IPR002033 Sec-independent periplasmic protein translocase TatC IPN28_11565 IPR018448 Twin-arginine translocation protein TatB IPN28_11565 IPR003369 Sec-independent protein translocase protein TatA/B/E IPN28_11575 IPR006312 Sec-independent protein translocase protein TatA/E IPN28_11575 IPR003369 Sec-independent protein translocase protein TatA/B/E IPN28_11580 IPR005234 Chromosome segregation/condensation protein ScpB IPN28_11580 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_11580 IPR036390 Winged helix DNA-binding domain superfamily IPN28_11585 IPR003768 Segregation and condensation protein A IPN28_11590 IPR001764 Glycoside hydrolase, family 3, N-terminal IPN28_11590 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily IPN28_11590 IPR019800 Glycoside hydrolase, family 3, active site IPN28_11590 IPR017853 Glycoside hydrolase superfamily IPN28_11590 IPR022956 Beta-hexosaminidase, bacterial IPN28_11600 IPR006674 HD domain IPN28_11600 IPR026875 Phosphohydrolase-associated domain IPN28_11600 IPR023023 dNTP triphosphohydrolase, type 2 IPN28_11600 IPR006261 dNTP triphosphohydrolase IPN28_11600 IPR003607 HD/PDEase domain IPN28_11615 IPR017870 FeS cluster insertion, C-terminal, conserved site IPN28_11615 IPR023063 FeS cluster insertion protein ErpA IPN28_11615 IPR000361 FeS cluster biogenesis IPN28_11615 IPR035903 HesB-like domain superfamily IPN28_11615 IPR016092 FeS cluster insertion protein IPN28_11670 IPR004380 Aspartate racemase IPN28_11670 IPR018187 Asp/Glu racemase, active site 1 IPN28_11670 IPR001920 Asp/Glu racemase IPN28_11670 IPR015942 Asp/Glu/hydantoin racemase IPN28_11670 IPR033134 Asp/Glu racemase, active site 2 IPN28_11675 IPR002197 DNA binding HTH domain, Fis-type IPN28_11675 IPR011006 CheY-like superfamily IPN28_11675 IPR002078 RNA polymerase sigma factor 54 interaction domain IPN28_11675 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 IPN28_11675 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 IPN28_11675 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_11675 IPR001789 Signal transduction response regulator, receiver domain IPN28_11675 IPR010114 DNA-binding transcriptional regulator NtrC IPN28_11675 IPR025944 Sigma-54 interaction domain, conserved site IPN28_11675 IPR003593 AAA+ ATPase domain IPN28_11675 IPR009057 Homeobox-like domain superfamily IPN28_11720 IPR039420 Transcriptional regulatory protein WalR-like IPN28_11720 IPR001789 Signal transduction response regulator, receiver domain IPN28_11720 IPR011006 CheY-like superfamily IPN28_11720 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_11720 IPR016032 Signal transduction response regulator, C-terminal effector IPN28_11720 IPR001867 OmpR/PhoB-type DNA-binding domain IPN28_11730 IPR029054 dUTPase-like IPN28_11730 IPR036157 dUTPase-like superfamily IPN28_11730 IPR011962 dCTP deaminase IPN28_11730 IPR033704 dUTPase, trimeric IPN28_11735 IPR036968 Enolpyruvate transferase domain superfamily IPN28_11735 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase IPN28_11735 IPR001986 Enolpyruvate transferase domain IPN28_11735 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta IPN28_11745 IPR038063 L,D-transpeptidase catalytic domain-like IPN28_11745 IPR005490 L,D-transpeptidase catalytic domain IPN28_11755 IPR038063 L,D-transpeptidase catalytic domain-like IPN28_11755 IPR005490 L,D-transpeptidase catalytic domain IPN28_11770 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G IPN28_11770 IPR022967 RNA-binding domain, S1 IPN28_11770 IPR003029 S1 domain IPN28_11770 IPR012340 Nucleic acid-binding, OB-fold IPN28_11770 IPR004659 Ribonuclease E/G IPN28_11775 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein IPN28_11775 IPR029001 Inosine triphosphate pyrophosphatase-like IPN28_11780 IPR004368 Translation initiation factor IF-1 IPN28_11780 IPR006196 RNA-binding domain, S1, IF1 type IPN28_11780 IPR012340 Nucleic acid-binding, OB-fold IPN28_11785 IPR008321 Uncharacterised conserved protein UCP032146 IPN28_11790 IPR024893 ATP phosphoribosyltransferase HisG, short form IPN28_11790 IPR001348 ATP phosphoribosyltransferase HisG IPN28_11790 IPR013820 ATP phosphoribosyltransferase, catalytic domain IPN28_11795 IPR017953 Carbohydrate kinase, predicted, conserved site IPN28_11795 IPR036652 YjeF N-terminal domain superfamily IPN28_11795 IPR004443 YjeF N-terminal domain IPN28_11795 IPR029056 Ribokinase-like IPN28_11795 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr IPN28_11795 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase IPN28_11830 IPR005999 Glycerol kinase IPN28_11830 IPR018485 Carbohydrate kinase, FGGY, C-terminal IPN28_11830 IPR018484 Carbohydrate kinase, FGGY, N-terminal IPN28_11830 IPR000577 Carbohydrate kinase, FGGY IPN28_11830 IPR018483 Carbohydrate kinase, FGGY, conserved site IPN28_11835 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily IPN28_11835 IPR006076 FAD dependent oxidoreductase IPN28_11835 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase IPN28_11835 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_11835 IPR031656 Alpha-glycerophosphate oxidase, C-terminal IPN28_11840 IPR011006 CheY-like superfamily IPN28_11840 IPR001789 Signal transduction response regulator, receiver domain IPN28_11845 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_11845 IPR011006 CheY-like superfamily IPN28_11845 IPR000014 PAS domain IPN28_11845 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_11845 IPR005467 Histidine kinase domain IPN28_11845 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_11845 IPR001789 Signal transduction response regulator, receiver domain IPN28_11845 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_11845 IPR035965 PAS domain superfamily IPN28_11845 IPR004358 Signal transduction histidine kinase-related protein, C-terminal IPN28_11845 IPR013656 PAS fold-4 IPN28_11865 IPR006225 Pseudouridine synthase, RluC/RluD IPN28_11865 IPR020103 Pseudouridine synthase, catalytic domain superfamily IPN28_11865 IPR036986 RNA-binding S4 domain superfamily IPN28_11865 IPR002942 RNA-binding S4 domain IPN28_11865 IPR006145 Pseudouridine synthase, RsuA/RluA IPN28_11865 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site IPN28_11875 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain IPN28_11875 IPR001296 Glycosyl transferase, family 1 IPN28_11880 IPR001789 Signal transduction response regulator, receiver domain IPN28_11880 IPR011006 CheY-like superfamily IPN28_11960 IPR004603 DNA mismatch endonuclease vsr IPN28_11960 IPR011335 Restriction endonuclease type II-like IPN28_11965 IPR018117 DNA methylase, C-5 cytosine-specific, active site IPN28_11965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_11965 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site IPN28_11965 IPR001525 C-5 cytosine methyltransferase IPN28_12000 IPR006530 YD repeat IPN28_12000 IPR031325 RHS repeat IPN28_12000 IPR001826 RHS protein IPN28_12000 IPR022385 Rhs repeat-associated core IPN28_12055 IPR009387 Toxin HigB-2 IPN28_12065 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase IPN28_12065 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_12080 IPR011991 ArsR-like helix-turn-helix domain IPN28_12080 IPR001845 HTH ArsR-type DNA-binding domain IPN28_12080 IPR036390 Winged helix DNA-binding domain superfamily IPN28_12080 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_12090 IPR000374 Phosphatidate cytidylyltransferase IPN28_12115 IPR021309 Protein of unknown function DUF2892 IPN28_12115 IPR001763 Rhodanese-like domain IPN28_12115 IPR036873 Rhodanese-like domain superfamily IPN28_12120 IPR011991 ArsR-like helix-turn-helix domain IPN28_12120 IPR036390 Winged helix DNA-binding domain superfamily IPN28_12120 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_12120 IPR001845 HTH ArsR-type DNA-binding domain IPN28_12125 IPR004675 Alkylhydroperoxidase AhpD core IPN28_12125 IPR003779 Carboxymuconolactone decarboxylase-like IPN28_12125 IPR029032 AhpD-like IPN28_12150 IPR022399 Helicase/secretion neighbourhood ATPase IPN28_12150 IPR001482 Type II/IV secretion system protein IPN28_12150 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_12165 IPR004846 Type II/III secretion system IPN28_12165 IPR007055 BON domain IPN28_12165 IPR001775 GspD/PilQ family IPN28_12165 IPR014004 Transport-associated and nodulation domain, bacteria IPN28_12165 IPR032789 Pilus formation protein, N-terminal IPN28_12210 IPR001114 Adenylosuccinate synthetase IPN28_12210 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_12210 IPR018220 Adenylosuccinate synthase, GTP-binding site IPN28_12210 IPR033128 Adenylosuccinate synthase, active site IPN28_12210 IPR042109 Adenylosuccinate synthetase, domain 1 IPN28_12210 IPR042110 Adenylosuccinate synthetase, domain 2 IPN28_12210 IPR042111 Adenylosuccinate synthetase, domain 3 IPN28_12215 IPR004517 ATP phosphoribosyltransferase regulatory subunit IPN28_12215 IPR006195 Aminoacyl-tRNA synthetase, class II IPN28_12215 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit IPN28_12215 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain IPN28_12225 IPR006352 Phosphoglucosamine mutase, bacterial type IPN28_12225 IPR005841 Alpha-D-phosphohexomutase superfamily IPN28_12225 IPR005843 Alpha-D-phosphohexomutase, C-terminal IPN28_12225 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IPN28_12225 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IPN28_12225 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IPN28_12225 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IPN28_12225 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IPN28_12240 IPR003959 ATPase, AAA-type, core IPN28_12240 IPR003593 AAA+ ATPase domain IPN28_12240 IPR041569 AAA ATPase, AAA+ lid domain IPN28_12240 IPR037219 Peptidase M41-like IPN28_12240 IPR000642 Peptidase M41 IPN28_12240 IPR011546 Peptidase M41, FtsH extracellular IPN28_12240 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_12240 IPR005936 Peptidase, FtsH IPN28_12240 IPR003960 ATPase, AAA-type, conserved site IPN28_12245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_12245 IPR012094 tRNA(Ile)-lysidine synthase IPN28_12245 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal IPN28_12245 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal IPN28_12255 IPR039001 Peptidoglycan-associated lipoprotein IPN28_12255 IPR006690 Outer membrane protein, OmpA-like, conserved site IPN28_12255 IPR006665 OmpA-like domain IPN28_12255 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal IPN28_12255 IPR036737 OmpA-like domain superfamily IPN28_12255 IPR006664 Outer membrane protein, bacterial IPN28_12265 IPR014004 Transport-associated and nodulation domain, bacteria IPN28_12265 IPR007055 BON domain IPN28_12270 IPR003509 Uncharacterised protein family UPF0102 IPN28_12270 IPR011856 tRNA endonuclease-like domain superfamily IPN28_12270 IPR011335 Restriction endonuclease type II-like IPN28_12275 IPR014776 Tetrapyrrole methylase, subdomain 2 IPN28_12275 IPR014777 Tetrapyrrole methylase, subdomain 1 IPN28_12275 IPR035996 Tetrapyrrole methylase superfamily IPN28_12275 IPR000878 Tetrapyrrole methylase IPN28_12275 IPR018063 SAM-dependent methyltransferase RsmI, conserved site IPN28_12275 IPR008189 rRNA small subunit methyltransferase I IPN28_12280 IPR028082 Periplasmic binding protein-like I IPN28_12280 IPR011990 Tetratricopeptide-like helical domain superfamily IPN28_12280 IPR007443 Penicillin-binding protein activator LpoA IPN28_12290 IPR009057 Homeobox-like domain superfamily IPN28_12290 IPR001647 DNA-binding HTH domain, TetR-type IPN28_12290 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily IPN28_12290 IPR011075 Tetracyclin repressor-like, C-terminal domain IPN28_12305 IPR036873 Rhodanese-like domain superfamily IPN28_12305 IPR040503 UPF0176, acylphosphatase-like domain IPN28_12305 IPR001763 Rhodanese-like domain IPN28_12305 IPR020936 Uncharacterised protein family UPF0176 IPN28_12310 IPR017968 Acylphosphatase, conserved site IPN28_12310 IPR036046 Acylphosphatase-like domain superfamily IPN28_12310 IPR020456 Acylphosphatase IPN28_12310 IPR001792 Acylphosphatase-like domain IPN28_12325 IPR013325 RNA polymerase sigma factor, region 2 IPN28_12325 IPR039425 RNA polymerase sigma-70 like IPN28_12325 IPR014284 RNA polymerase sigma-70 like domain IPN28_12325 IPR007627 RNA polymerase sigma-70 region 2 IPN28_12325 IPR013324 RNA polymerase sigma factor, region 3/4-like IPN28_12325 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 IPN28_12325 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_12345 IPR000715 Glycosyl transferase, family 4 IPN28_12355 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal IPN28_12355 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC IPN28_12355 IPR008471 MnmC-like methyltransferase IPN28_12355 IPR006076 FAD dependent oxidoreductase IPN28_12355 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_12360 IPR006076 FAD dependent oxidoreductase IPN28_12360 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_12360 IPR008471 MnmC-like methyltransferase IPN28_12360 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC IPN28_12360 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal IPN28_12365 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 IPN28_12365 IPR001567 Peptidase M3A/M3B catalytic domain IPN28_12375 IPR029024 TerB-like IPN28_12375 IPR023749 Co-chaperone DjlA IPN28_12375 IPR001623 DnaJ domain IPN28_12375 IPR036869 Chaperone J-domain superfamily IPN28_12375 IPR007791 Co-chaperone DjlA, N-terminal IPN28_12385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_12385 IPR002052 DNA methylase, N-6 adenine-specific, conserved site IPN28_12385 IPR007473 Ribosomal RNA large subunit methyltransferase J IPN28_12405 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase IPN28_12405 IPR011051 RmlC-like cupin domain superfamily IPN28_12405 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal IPN28_12405 IPR005835 Nucleotidyl transferase domain IPN28_12405 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_12405 IPR014710 RmlC-like jelly roll fold IPN28_12410 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase IPN28_12410 IPR036291 NAD(P)-binding domain superfamily IPN28_12410 IPR001509 NAD-dependent epimerase/dehydratase IPN28_12415 IPR006368 GDP-mannose 4,6-dehydratase IPN28_12415 IPR016040 NAD(P)-binding domain IPN28_12415 IPR036291 NAD(P)-binding domain superfamily IPN28_12445 IPR036291 NAD(P)-binding domain superfamily IPN28_12445 IPR001509 NAD-dependent epimerase/dehydratase IPN28_12455 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 IPN28_12455 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily IPN28_12455 IPR005145 Putative GTP-binding controlling metal-binding domain IPN28_12455 IPR006070 YrdC-like domain IPN28_12455 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily IPN28_12460 IPR011813 Penicillin-binding protein 1B IPN28_12460 IPR012338 Beta-lactamase/transpeptidase-like IPN28_12460 IPR001264 Glycosyl transferase, family 51 IPN28_12460 IPR001460 Penicillin-binding protein, transpeptidase IPN28_12460 IPR028166 Bifunctional transglycosylase second domain IPN28_12460 IPR023346 Lysozyme-like domain superfamily IPN28_12460 IPR036950 Penicillin binding protein transglycosylase domain IPN28_12465 IPR005338 Anhydro-N-acetylmuramic acid kinase IPN28_12470 IPR002305 Aminoacyl-tRNA synthetase, class Ic IPN28_12470 IPR002942 RNA-binding S4 domain IPN28_12470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_12470 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 IPN28_12470 IPR024088 Tyrosine-tRNA ligase, bacterial-type IPN28_12470 IPR002307 Tyrosine-tRNA ligase IPN28_12470 IPR036986 RNA-binding S4 domain superfamily IPN28_12495 IPR013766 Thioredoxin domain IPN28_12495 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPN28_12495 IPR024706 Peroxiredoxin, AhpC-type IPN28_12495 IPR036249 Thioredoxin-like superfamily IPN28_12500 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain IPN28_12500 IPR029058 Alpha/Beta hydrolase fold IPN28_12505 IPR015421 Pyridoxal phosphate-dependent transferase, major domain IPN28_12505 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 IPN28_12505 IPR015424 Pyridoxal phosphate-dependent transferase IPN28_12505 IPR017772 Cysteine desulfurase NifS, bacterial/archaeal IPN28_12505 IPR010240 Cysteine desulfurase IscS IPN28_12505 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site IPN28_12505 IPR016454 Cysteine desulfurase IPN28_12505 IPR000192 Aminotransferase class V domain IPN28_12510 IPR036010 2Fe-2S ferredoxin-like superfamily IPN28_12510 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain IPN28_12510 IPR001055 Adrenodoxin IPN28_12510 IPR018298 Adrenodoxin, iron-sulphur binding site IPN28_12510 IPR012675 Beta-grasp domain superfamily IPN28_12530 IPR004506 tRNA-specific 2-thiouridylase IPN28_12530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPN28_12530 IPR023382 Adenine nucleotide alpha hydrolase-like domains IPN28_12575 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal IPN28_12575 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily IPN28_12575 IPR005218 Diacylglycerol/lipid kinase IPN28_12575 IPR001206 Diacylglycerol kinase, catalytic domain IPN28_12600 IPR003660 HAMP domain IPN28_12600 IPR004010 Double Cache domain 2 IPN28_12600 IPR004090 Chemotaxis methyl-accepting receptor IPN28_12600 IPR033480 Single Cache domain 2 IPN28_12600 IPR000727 Target SNARE coiled-coil homology domain IPN28_12600 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPN28_12605 IPR033480 Single Cache domain 2 IPN28_12605 IPR000727 Target SNARE coiled-coil homology domain IPN28_12605 IPR003660 HAMP domain IPN28_12605 IPR004090 Chemotaxis methyl-accepting receptor IPN28_12605 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain IPN28_12605 IPR004010 Double Cache domain 2 IPN28_12650 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain IPN28_12650 IPR006143 RND efflux pump, membrane fusion protein IPN28_12655 IPR022831 Multidrug resistance protein MdtB IPN28_12655 IPR001036 Acriflavin resistance protein IPN28_12655 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains IPN28_12660 IPR012640 Membrane lipoprotein, lipid attachment site IPN28_12660 IPR003423 Outer membrane efflux protein IPN28_12660 IPR010131 RND efflux system, outer membrane lipoprotein, NodT IPN28_12665 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily IPN28_12665 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily IPN28_12665 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal IPN28_12665 IPR006089 Acyl-CoA dehydrogenase, conserved site IPN28_12665 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPN28_12665 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal IPN28_12665 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPN28_12680 IPR004299 Membrane bound O-acyl transferase, MBOAT IPN28_12680 IPR028362 Alginate O-acetyltransferase AlgI IPN28_12680 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB IPN28_12685 IPR013858 Peptidase M10 serralysin, C-terminal IPN28_12685 IPR011049 Serralysin-like metalloprotease, C-terminal IPN28_12685 IPR018511 Hemolysin-type calcium-binding conserved site IPN28_12685 IPR001343 RTX calcium-binding nonapeptide repeat IPN28_12685 IPR024535 Pectate lyase superfamily protein IPN28_12685 IPR012334 Pectin lyase fold IPN28_12685 IPR011050 Pectin lyase fold/virulence factor IPN28_12685 IPR006633 Carbohydrate-binding/sugar hydrolysis domain IPN28_12685 IPR006626 Parallel beta-helix repeat IPN28_12690 IPR014718 Glycoside hydrolase-type carbohydrate-binding IPN28_12690 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase IPN28_12690 IPR025532 Glucose-6-phosphate 1-epimerase IPN28_12690 IPR011013 Galactose mutarotase-like domain superfamily IPN28_12705 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase IPN28_12705 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal IPN28_12705 IPR005835 Nucleotidyl transferase domain IPN28_12705 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_12705 IPR014710 RmlC-like jelly roll fold IPN28_12705 IPR011051 RmlC-like cupin domain superfamily IPN28_12710 IPR009875 PilZ domain IPN28_12720 IPR034655 Alginate biosynthesis protein AlgX, N-terminal IPN28_12720 IPR038639 AlgX, C-terminal domain superfamily IPN28_12720 IPR031798 Alginate biosynthesis protein AlgX, C-terminal carbohydrate-binding module IPN28_12720 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain IPN28_12730 IPR008929 Chondroitin AC/alginate lyase IPN28_12730 IPR008397 Alginate lyase domain IPN28_12735 IPR034655 Alginate biosynthesis protein AlgX, N-terminal IPN28_12735 IPR038639 AlgX, C-terminal domain superfamily IPN28_12735 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain IPN28_12735 IPR031798 Alginate biosynthesis protein AlgX, C-terminal carbohydrate-binding module IPN28_12740 IPR034657 Alginate O-acetyltranferase AlgJ IPN28_12740 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain IPN28_12745 IPR012334 Pectin lyase fold IPN28_12745 IPR039448 Right handed beta helix domain IPN28_12745 IPR011050 Pectin lyase fold/virulence factor IPN28_12745 IPR006633 Carbohydrate-binding/sugar hydrolysis domain IPN28_12745 IPR006626 Parallel beta-helix repeat IPN28_12745 IPR022441 Parallel beta-helix repeat-2 IPN28_12750 IPR034657 Alginate O-acetyltranferase AlgJ IPN28_12750 IPR031811 AlgX/AlgJ, SGNH hydrolase-like domain IPN28_12755 IPR035422 Alginate O-acetyl transferase AlgF IPN28_12760 IPR016066 Alpha-D-phosphohexomutase, conserved site IPN28_12760 IPR005841 Alpha-D-phosphohexomutase superfamily IPN28_12760 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily IPN28_12760 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III IPN28_12760 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II IPN28_12760 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I IPN28_12760 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III IPN28_12760 IPR005843 Alpha-D-phosphohexomutase, C-terminal IPN28_12765 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_12770 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal IPN28_12770 IPR017476 UDP-glucose/GDP-mannose dehydrogenase IPN28_12770 IPR028358 GDP-mannose 6-dehydrogenase IPN28_12770 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPN28_12770 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily IPN28_12770 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation IPN28_12770 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal IPN28_12770 IPR036291 NAD(P)-binding domain superfamily IPN28_12795 IPR029479 Nitroreductase IPN28_12795 IPR000415 Nitroreductase-like IPN28_12800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_12800 IPR025714 Methyltransferase domain IPN28_12815 IPR008526 Inner membrane protein YedI IPN28_12820 IPR033764 SD-repeat containing protein, B domain IPN28_12820 IPR019931 LPXTG cell wall anchor domain IPN28_12820 IPR011252 Fibrogen-binding domain 1 IPN28_12820 IPR041171 SDR-like Ig domain IPN28_12820 IPR019948 Gram-positive LPXTG cell wall anchor IPN28_12820 IPR005877 YSIRK Gram-positive signal peptide IPN28_12820 IPR008966 Adhesion domain superfamily IPN28_12820 IPR013783 Immunoglobulin-like fold IPN28_12840 IPR041679 DNA2/NAM7 helicase-like, AAA domain IPN28_12840 IPR001736 Phospholipase D/Transphosphatidylase IPN28_12840 IPR025202 Phospholipase D-like domain IPN28_12840 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_12845 IPR027785 UvrD-like helicase C-terminal domain IPN28_12845 IPR041451 RecD-like DNA helicase, SH3 domain IPN28_12845 IPR029493 RecD helicase-like helix-hairpin-helix domain IPN28_12845 IPR003593 AAA+ ATPase domain IPN28_12845 IPR006345 RecD-like DNA helicase IPN28_12845 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_12920 IPR035948 YwqG-like superfamily IPN28_12920 IPR015315 Protein of unknown function DUF1963 IPN28_12930 IPR037196 HSP90, C-terminal domain IPN28_12930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_12930 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_12930 IPR001404 Heat shock protein Hsp90 family IPN28_12930 IPR020568 Ribosomal protein S5 domain 2-type fold IPN28_12930 IPR020575 Heat shock protein Hsp90, N-terminal IPN28_12950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_12950 IPR001525 C-5 cytosine methyltransferase IPN28_12975 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_12975 IPR006076 FAD dependent oxidoreductase IPN28_12975 IPR023080 D-amino acid dehydrogenase DadA IPN28_12980 IPR006076 FAD dependent oxidoreductase IPN28_12980 IPR036188 FAD/NAD(P)-binding domain superfamily IPN28_12980 IPR012727 Glycine oxidase ThiO IPN28_12980 IPR023209 D-amino-acid oxidase IPN28_12995 IPR013785 Aldolase-type TIM barrel IPN28_12995 IPR033983 Thiazole synthase ThiG IPN28_12995 IPR008867 Thiazole synthase IPN28_13000 IPR004131 Pyrophosphate-energised proton pump IPN28_13010 IPR002059 Cold-shock protein, DNA-binding IPN28_13010 IPR012156 Cold shock, CspA IPN28_13010 IPR011129 Cold shock domain IPN28_13010 IPR012340 Nucleic acid-binding, OB-fold IPN28_13010 IPR019844 Cold-shock (CSD) domain IPN28_13090 IPR003841 Sodium-dependent phosphate transport protein IPN28_13090 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein IPN28_13100 IPR001173 Glycosyltransferase 2-like IPN28_13100 IPR029044 Nucleotide-diphospho-sugar transferases IPN28_13100 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE IPN28_13125 IPR002781 Transmembrane protein TauE-like IPN28_13155 IPR036388 Winged helix-like DNA-binding domain superfamily IPN28_13155 IPR002577 Helix-turn-helix, HxlR type IPN28_13155 IPR036390 Winged helix DNA-binding domain superfamily IPN28_13180 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site IPN28_13180 IPR022418 Porphobilinogen deaminase, C-terminal IPN28_13180 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily IPN28_13180 IPR000860 Porphobilinogen deaminase IPN28_13180 IPR022417 Porphobilinogen deaminase, N-terminal IPN28_13185 IPR017861 Kae1/TsaD family IPN28_13185 IPR000905 Gcp-like domain IPN28_13185 IPR017860 Peptidase M22, conserved site IPN28_13185 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD IPN28_13190 IPR013328 6-phosphogluconate dehydrogenase, domain 2 IPN28_13190 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal IPN28_13190 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal IPN28_13190 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPN28_13190 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent IPN28_13190 IPR036291 NAD(P)-binding domain superfamily IPN28_13200 IPR011904 Acetate-CoA ligase IPN28_13200 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain IPN28_13200 IPR042099 AMP-dependent synthetase-like superfamily IPN28_13200 IPR000873 AMP-dependent synthetase/ligase IPN28_13200 IPR025110 AMP-binding enzyme, C-terminal domain IPN28_13200 IPR020845 AMP-binding, conserved site IPN28_13215 IPR018753 Azospirillum phage Cd, Gp10 IPN28_13225 IPR011009 Protein kinase-like domain superfamily IPN28_13225 IPR000719 Protein kinase domain IPN28_13225 IPR004147 UbiB domain IPN28_13260 IPR000644 CBS domain IPN28_13265 IPR003593 AAA+ ATPase domain IPN28_13265 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_13265 IPR003439 ABC transporter-like IPN28_13265 IPR017871 ABC transporter, conserved site IPN28_13305 IPR020940 Thymidylate synthase, active site IPN28_13305 IPR000398 Thymidylate synthase IPN28_13305 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily IPN28_13305 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain IPN28_13310 IPR012259 Dihydrofolate reductase IPN28_13310 IPR017925 Dihydrofolate reductase conserved site IPN28_13310 IPR024072 Dihydrofolate reductase-like domain superfamily IPN28_13310 IPR001796 Dihydrofolate reductase domain IPN28_13315 IPR019591 Mrp/NBP35 ATP-binding protein IPN28_13315 IPR000808 Mrp, conserved site IPN28_13315 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_13315 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 IPN28_13315 IPR034904 Fe-S cluster assembly domain superfamily IPN28_13320 IPR036013 Band 7/SPFH domain superfamily IPN28_13320 IPR001107 Band 7 domain IPN28_13320 IPR010201 HflK IPN28_13325 IPR036013 Band 7/SPFH domain superfamily IPN28_13325 IPR010200 HflC IPN28_13325 IPR001107 Band 7 domain IPN28_13330 IPR009003 Peptidase S1, PA clan IPN28_13330 IPR001478 PDZ domain IPN28_13330 IPR001940 Peptidase S1C IPN28_13330 IPR036034 PDZ superfamily IPN28_13330 IPR011782 Peptidase S1C, Do IPN28_13340 IPR010093 SinI-like, DNA-binding domain IPN28_13340 IPR041657 Helix-turn-helix domain, group 17 IPN28_13340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase IPN28_13340 IPR018117 DNA methylase, C-5 cytosine-specific, active site IPN28_13340 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site IPN28_13340 IPR001525 C-5 cytosine methyltransferase IPN28_13350 IPR039657 Dimethylallyltransferase IPN28_13350 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_13350 IPR018022 IPP transferase IPN28_13365 IPR000399 TPP-binding enzyme, conserved site IPN28_13365 IPR012846 Acetolactate synthase, large subunit, biosynthetic IPN28_13365 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain IPN28_13365 IPR012000 Thiamine pyrophosphate enzyme, central domain IPN28_13365 IPR029061 Thiamin diphosphate-binding fold IPN28_13365 IPR029035 DHS-like NAD/FAD-binding domain superfamily IPN28_13365 IPR039368 Acetolactate synthase large subunit, TPP binding domain IPN28_13365 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding IPN28_13385 IPR003855 Potassium transporter IPN28_13385 IPR023051 Potassium uptake protein, low affinity, Kup IPN28_13390 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal IPN28_13390 IPR039557 AHAS, ACT domain IPN28_13390 IPR004789 Acetolactate synthase, small subunit IPN28_13390 IPR002912 ACT domain IPN28_13390 IPR019455 Acetolactate synthase, small subunit, C-terminal IPN28_13400 IPR000506 Ketol-acid reductoisomerase, C-terminal IPN28_13400 IPR036291 NAD(P)-binding domain superfamily IPN28_13400 IPR013116 Ketol-acid reductoisomerase, N-terminal IPN28_13400 IPR014359 Ketol-acid reductoisomerase, prokaryotic IPN28_13400 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily IPN28_13400 IPR013023 Ketol-acid reductoisomerase IPN28_13445 IPR011034 Formyl transferase-like, C-terminal domain superfamily IPN28_13445 IPR036477 Formyl transferase, N-terminal domain superfamily IPN28_13445 IPR036291 NAD(P)-binding domain superfamily IPN28_13445 IPR005793 Formyl transferase, C-terminal IPN28_13445 IPR001509 NAD-dependent epimerase/dehydratase IPN28_13445 IPR002376 Formyl transferase, N-terminal IPN28_13445 IPR021168 Bifunctional polymyxin resistance protein, ArnA IPN28_13450 IPR011006 CheY-like superfamily IPN28_13450 IPR001789 Signal transduction response regulator, receiver domain IPN28_13455 IPR036890 Histidine kinase/HSP90-like ATPase superfamily IPN28_13455 IPR003594 Histidine kinase/HSP90-like ATPase IPN28_13455 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain IPN28_13455 IPR029016 GAF-like domain superfamily IPN28_13455 IPR013515 Phytochrome, central region IPN28_13455 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily IPN28_13455 IPR005467 Histidine kinase domain IPN28_13455 IPR035965 PAS domain superfamily IPN28_13455 IPR013654 PAS fold-2 IPN28_13455 IPR001294 Phytochrome IPN28_13455 IPR016132 Phytochrome chromophore attachment domain IPN28_13455 IPR003018 GAF domain IPN28_13460 IPR029035 DHS-like NAD/FAD-binding domain superfamily IPN28_13460 IPR003000 Sirtuin family IPN28_13460 IPR026590 Sirtuin family, catalytic core domain IPN28_13460 IPR027546 Sirtuin, class III IPN28_13460 IPR026591 Sirtuin, catalytic core small domain superfamily IPN28_13465 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain IPN28_13465 IPR021731 AMIN domain IPN28_13465 IPR006311 Twin-arginine translocation pathway, signal sequence IPN28_13475 IPR041597 L,D-transpeptidase C-terminal domain IPN28_13475 IPR038063 L,D-transpeptidase catalytic domain-like IPN28_13475 IPR005490 L,D-transpeptidase catalytic domain IPN28_13495 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat IPN28_13495 IPR017687 Outer membrane protein assembly factor BamB IPN28_13495 IPR002372 Pyrrolo-quinoline quinone repeat IPN28_13495 IPR015943 WD40/YVTN repeat-like-containing domain superfamily IPN28_13495 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily IPN28_13500 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_13500 IPR005225 Small GTP-binding protein domain IPN28_13500 IPR031166 EngA-type guanine nucleotide-binding (G) domain IPN28_13500 IPR032859 GTPase Der, C-terminal KH-domain-like IPN28_13500 IPR015946 K homology domain-like, alpha/beta IPN28_13500 IPR016484 GTP-binding protein EngA IPN28_13500 IPR006073 GTP binding domain IPN28_13510 IPR006686 Mechanosensitive ion channel MscS, conserved site IPN28_13510 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 IPN28_13510 IPR023408 Mechanosensitive ion channel MscS domain superfamily IPN28_13510 IPR008910 Conserved TM helix IPN28_13510 IPR010920 LSM domain superfamily IPN28_13510 IPR006685 Mechanosensitive ion channel MscS IPN28_13510 IPR011066 Mechanosensitive ion channel MscS, C-terminal IPN28_13520 IPR000836 Phosphoribosyltransferase domain IPN28_13520 IPR029057 Phosphoribosyltransferase-like IPN28_13520 IPR005854 Amidophosphoribosyltransferase IPN28_13520 IPR035584 Amidophosphoribosyltransferase, N-terminal IPN28_13520 IPR017932 Glutamine amidotransferase type 2 domain IPN28_13520 IPR029055 Nucleophile aminohydrolases, N-terminal IPN28_13530 IPR019814 Translation initiation factor 3, N-terminal IPN28_13530 IPR019815 Translation initiation factor 3, C-terminal IPN28_13530 IPR001288 Translation initiation factor 3 IPN28_13530 IPR019813 Translation initiation factor 3, conserved site IPN28_13530 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily IPN28_13530 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily IPN28_13535 IPR033728 Threonine-tRNA ligase catalytic core domain IPN28_13535 IPR002320 Threonine-tRNA ligase, class IIa IPN28_13535 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily IPN28_13535 IPR012675 Beta-grasp domain superfamily IPN28_13535 IPR012947 Threonyl/alanyl tRNA synthetase, SAD IPN28_13535 IPR036621 Anticodon-binding domain superfamily IPN28_13535 IPR004154 Anticodon-binding IPN28_13535 IPR012676 TGS-like IPN28_13535 IPR004095 TGS IPN28_13535 IPR006195 Aminoacyl-tRNA synthetase, class II IPN28_13535 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) IPN28_13540 IPR010129 Type I secretion membrane fusion protein, HlyD family IPN28_13540 IPR006144 Secretion protein HlyD, conserved site IPN28_13545 IPR036640 ABC transporter type 1, transmembrane domain superfamily IPN28_13545 IPR010128 ATPase, type I secretion system, PrtD IPN28_13545 IPR027417 P-loop containing nucleoside triphosphate hydrolase IPN28_13545 IPR011527 ABC transporter type 1, transmembrane domain IPN28_13545 IPR003593 AAA+ ATPase domain IPN28_13545 IPR003439 ABC transporter-like IPN28_13545 IPR017871 ABC transporter, conserved site IPN28_13560 IPR011006 CheY-like superfamily IPN28_13560 IPR001789 Signal transduction response regulator, receiver domain IPN28_13570 IPR001789 Signal transduction response regulator, receiver domain IPN28_13570 IPR011006 CheY-like superfamily IPN28_13580 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site IPN28_13580 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 IPN28_13580 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain IPN28_13580 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IPN28_13580 IPR029009 Allosteric substrate binding domain superfamily IPN28_13580 IPR002912 ACT domain IPN28_13580 IPR006236 D-3-phosphoglycerate dehydrogenase IPN28_13580 IPR036291 NAD(P)-binding domain superfamily