WYH_00003 SM00788 Adenylosuccinate synthetase WYH_00009 SM00986 Uracil DNA glycosylase superfamily WYH_00009 SM00987 UreE urease accessory protein, C-terminal domain WYH_00024 SM00382 ATPases associated with a variety of cellular activities WYH_00026 SM00316 Ribosomal protein S1-like RNA-binding domain WYH_00026 SM00322 K homology RNA-binding domain WYH_00035 SM01387 WYH_00035 WYH_00036 SM00316 Ribosomal protein S1-like RNA-binding domain WYH_00036 SM00322 K homology RNA-binding domain WYH_00038 SM00822 WYH_00038 WYH_00039 SM00822 WYH_00039 WYH_00044 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor WYH_00048 SM00992 Hemimethylated DNA-binding protein YccV like WYH_00051 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain WYH_00057 SM00342 helix_turn_helix, arabinose operon control protein WYH_00059 SM00342 helix_turn_helix, arabinose operon control protein WYH_00076 SM00838 Elongation factor G C-terminus WYH_00076 SM00889 Elongation factor G, domain IV WYH_00078 SM01403 WYH_00078 WYH_00082 SM01382 WYH_00082 WYH_00082 SM01383 WYH_00082 WYH_00085 SM00322 K homology RNA-binding domain WYH_00089 SM01374 WYH_00089 WYH_00090 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. WYH_00104 SM00662 RNA polymerases D WYH_00114 SM00861 Transketolase, pyrimidine binding domain WYH_00115 SM00465 GIY-YIG type nucleases (URI domain) WYH_00116 SM00881 CoA binding domain WYH_00118 SM00052 Putative diguanylate phosphodiesterase WYH_00118 SM00267 diguanylate cyclase WYH_00128 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. WYH_00129 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. WYH_00148 SM00244 prohibitin homologues WYH_00153 SM01130 WYH_00153 WYH_00156 SM00091 PAS domain WYH_00156 SM00387 Histidine kinase-like ATPases WYH_00156 SM00388 His Kinase A (phosphoacceptor) domain WYH_00156 SM00448 cheY-homologous receiver domain WYH_00159 SM00382 ATPases associated with a variety of cellular activities WYH_00161 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain WYH_00166 SM01329 WYH_00166 WYH_00172 SM00824 Thioesterase WYH_00175 SM00448 cheY-homologous receiver domain WYH_00180 SM00487 DEAD-like helicases superfamily WYH_00180 SM00490 helicase superfamily c-terminal domain WYH_00185 SM00363 S4 RNA-binding domain WYH_00192 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family WYH_00194 SM00998 Adenylosuccinate lyase C-terminus WYH_00197 SM00028 Tetratricopeptide repeats WYH_00207 SM00849 Metallo-beta-lactamase superfamily WYH_00209 SM00316 Ribosomal protein S1-like RNA-binding domain WYH_00215 SM00382 ATPases associated with a variety of cellular activities WYH_00215 SM00962 SRP54-type protein, GTPase domain WYH_00215 SM00963 SRP54-type protein, helical bundle domain WYH_00226 SM00859 Semialdehyde dehydrogenase, NAD binding domain WYH_00238 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. WYH_00239 SM00822 WYH_00239 WYH_00240 SM00480 DNA polymerase III beta subunit WYH_00242 SM00052 Putative diguanylate phosphodiesterase WYH_00242 SM00267 diguanylate cyclase WYH_00243 SM00052 Putative diguanylate phosphodiesterase WYH_00243 SM00267 diguanylate cyclase WYH_00258 SM00292 breast cancer carboxy-terminal domain WYH_00258 SM00532 Ligase N family WYH_00262 SM00849 Metallo-beta-lactamase superfamily WYH_00277 SM00342 helix_turn_helix, arabinose operon control protein WYH_00278 SM00116 Domain in cystathionine beta-synthase and other proteins. WYH_00278 SM01240 WYH_00278 WYH_00280 SM00028 Tetratricopeptide repeats WYH_00288 SM00822 WYH_00288 WYH_00329 SM00345 helix_turn_helix gluconate operon transcriptional repressor WYH_00330 SM00903 Flavin reductase like domain WYH_00332 SM00345 helix_turn_helix gluconate operon transcriptional repressor WYH_00340 SM00354 helix_turn _helix lactose operon repressor WYH_00348 SM00861 Transketolase, pyrimidine binding domain WYH_00356 SM00861 Transketolase, pyrimidine binding domain WYH_00357 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WYH_00364 SM00841 Elongation factor P, C-terminal WYH_00364 SM01185 WYH_00364 WYH_00370 SM00387 Histidine kinase-like ATPases WYH_00371 SM00382 ATPases associated with a variety of cellular activities WYH_00371 SM00448 cheY-homologous receiver domain WYH_00372 SM00028 Tetratricopeptide repeats WYH_00379 SM00448 cheY-homologous receiver domain WYH_00379 SM00862 Transcriptional regulatory protein, C terminal WYH_00381 SM00382 ATPases associated with a variety of cellular activities WYH_00386 SM00387 Histidine kinase-like ATPases WYH_00386 SM00388 His Kinase A (phosphoacceptor) domain WYH_00392 SM00917 LeuA allosteric (dimerisation) domain WYH_00393 SM00867 YceI-like domain WYH_00407 SM00382 ATPases associated with a variety of cellular activities WYH_00411 SM00363 S4 RNA-binding domain WYH_00411 SM01390 WYH_00411 WYH_00420 SM00400 zinc finger WYH_00420 SM00493 WYH_00420 WYH_00422 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain WYH_00424 SM00851 MGS-like domain WYH_00424 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain WYH_00431 SM01192 WYH_00431 WYH_00431 SM01193 WYH_00431 WYH_00435 SM00903 Flavin reductase like domain WYH_00439 SM00822 WYH_00439 WYH_00444 SM00345 helix_turn_helix gluconate operon transcriptional repressor WYH_00444 SM00895 WYH_00444 WYH_00446 SM00854 Bacterial capsule synthesis protein PGA_cap WYH_00454 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain WYH_00464 SM00829 Enoylreductase WYH_00466 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_00471 SM00861 Transketolase, pyrimidine binding domain WYH_00479 SM00434 DNA Topoisomerase IV WYH_00505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). WYH_00507 SM00387 Histidine kinase-like ATPases WYH_00507 SM00433 TopoisomeraseII WYH_00514 SM00729 Elongator protein 3, MiaB family, Radical SAM WYH_00523 SM00271 DnaJ molecular chaperone homology domain WYH_00524 SM00382 ATPases associated with a variety of cellular activities WYH_00528 SM01005 Alanine racemase, C-terminal domain WYH_00530 SM00946 Prolyl-tRNA synthetase, C-terminal WYH_00531 SM00316 Ribosomal protein S1-like RNA-binding domain WYH_00531 SM00955 WYH_00531 WYH_00543 SM00936 Penicillin-binding protein 5, C-terminal domain WYH_00548 SM00849 Metallo-beta-lactamase superfamily WYH_00553 SM00382 ATPases associated with a variety of cellular activities WYH_00553 SM00448 cheY-homologous receiver domain WYH_00554 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WYH_00554 SM00387 Histidine kinase-like ATPases WYH_00554 SM00388 His Kinase A (phosphoacceptor) domain WYH_00555 SM00382 ATPases associated with a variety of cellular activities WYH_00555 SM00448 cheY-homologous receiver domain WYH_00556 SM00091 PAS domain WYH_00556 SM00387 Histidine kinase-like ATPases WYH_00556 SM00388 His Kinase A (phosphoacceptor) domain WYH_00561 SM00729 Elongator protein 3, MiaB family, Radical SAM WYH_00562 SM00947 Carbonic anhydrase WYH_00567 SM00853 MutL C terminal dimerisation domain WYH_00567 SM01340 WYH_00567 WYH_00576 SM00857 Resolvase, N terminal domain WYH_00586 SM00400 zinc finger WYH_00606 SM00852 Probable molybdopterin binding domain WYH_00612 SM00387 Histidine kinase-like ATPases WYH_00618 SM00849 Metallo-beta-lactamase superfamily WYH_00628 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WYH_00630 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WYH_00641 SM00937 WYH_00641 WYH_00644 SM00646 WYH_00644 WYH_00645 SM00316 Ribosomal protein S1-like RNA-binding domain WYH_00658 SM00382 ATPases associated with a variety of cellular activities WYH_00684 SM00481 DNA polymerase alpha chain like domain WYH_00687 SM00382 ATPases associated with a variety of cellular activities WYH_00689 SM00487 DEAD-like helicases superfamily WYH_00689 SM00490 helicase superfamily c-terminal domain WYH_00691 SM00487 DEAD-like helicases superfamily WYH_00691 SM00490 helicase superfamily c-terminal domain WYH_00691 SM00982 WYH_00691 WYH_00691 SM01058 CarD-like/TRCF domain WYH_00692 SM00052 Putative diguanylate phosphodiesterase WYH_00699 SM00957 SecA DEAD-like domain WYH_00699 SM00958 SecA preprotein cross-linking domain WYH_00709 SM00091 PAS domain WYH_00709 SM00387 Histidine kinase-like ATPases WYH_00709 SM00388 His Kinase A (phosphoacceptor) domain WYH_00710 SM00996 S-adenosyl-L-homocysteine hydrolase WYH_00710 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain WYH_00714 SM00155 Phospholipase D. Active site motifs. WYH_00732 SM00487 DEAD-like helicases superfamily WYH_00732 SM00490 helicase superfamily c-terminal domain WYH_00737 SM00358 Double-stranded RNA binding motif WYH_00737 SM00535 Ribonuclease III family WYH_00741 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain WYH_00741 SM00437 Bacterial DNA topoisomerase I DNA-binding domain WYH_00741 SM00493 WYH_00741 WYH_00743 SM01207 WYH_00743 WYH_00772 SM00382 ATPases associated with a variety of cellular activities WYH_00791 SM00382 ATPases associated with a variety of cellular activities WYH_00800 SM00825 Beta-ketoacyl synthase WYH_00801 SM00823 Phosphopantetheine attachment site WYH_00803 SM00341 Helicase and RNase D C-terminal WYH_00803 SM00474 3'-5' exonuclease WYH_00810 SM00052 Putative diguanylate phosphodiesterase WYH_00810 SM00267 diguanylate cyclase WYH_00812 SM00729 Elongator protein 3, MiaB family, Radical SAM WYH_00813 SM00382 ATPases associated with a variety of cellular activities WYH_00813 SM00962 SRP54-type protein, GTPase domain WYH_00813 SM00963 SRP54-type protein, helical bundle domain WYH_00824 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WYH_00826 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. WYH_00830 SM00935 Outer membrane protein (OmpH-like) WYH_00832 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WYH_00858 SM00967 RNA 2'-O ribose methyltransferase substrate binding WYH_00860 SM00411 bacterial (prokaryotic) histone like domain WYH_00861 SM00382 ATPases associated with a variety of cellular activities WYH_00861 SM00464 Found in ATP-dependent protease La (LON) WYH_00864 SM00382 ATPases associated with a variety of cellular activities WYH_00866 SM00487 DEAD-like helicases superfamily WYH_00866 SM00490 helicase superfamily c-terminal domain WYH_00866 SM00847 Helicase associated domain (HA2) Add an annotation WYH_00869 SM00830 Chorismate mutase type II WYH_00871 SM00387 Histidine kinase-like ATPases WYH_00872 SM00448 cheY-homologous receiver domain WYH_00872 SM00862 Transcriptional regulatory protein, C terminal WYH_00875 SM00382 ATPases associated with a variety of cellular activities WYH_00877 SM00530 Helix-turn-helix XRE-family like proteins WYH_00880 SM01323 WYH_00880 WYH_00885 SM00878 Biotin carboxylase C-terminal domain WYH_00887 SM00344 helix_turn_helix ASNC type WYH_00888 SM00388 His Kinase A (phosphoacceptor) domain WYH_00898 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain WYH_00902 SM00854 Bacterial capsule synthesis protein PGA_cap WYH_00903 SM00354 helix_turn _helix lactose operon repressor WYH_00904 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain WYH_00916 SM00382 ATPases associated with a variety of cellular activities WYH_00920 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. WYH_00928 SM00491 WYH_00928 WYH_00930 SM00422 helix_turn_helix, mercury resistance WYH_00931 SM00411 bacterial (prokaryotic) histone like domain WYH_00934 SM00849 Metallo-beta-lactamase superfamily WYH_00943 SM00327 von Willebrand factor (vWF) type A domain WYH_00946 SM00487 DEAD-like helicases superfamily WYH_00946 SM00490 helicase superfamily c-terminal domain WYH_00948 SM00342 helix_turn_helix, arabinose operon control protein WYH_00953 SM00382 ATPases associated with a variety of cellular activities WYH_00965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WYH_00970 SM01002 Alanine dehydrogenase/PNT, C-terminal domain WYH_00970 SM01003 Alanine dehydrogenase/PNT, N-terminal domain WYH_00972 SM00382 ATPases associated with a variety of cellular activities WYH_00972 SM00448 cheY-homologous receiver domain WYH_00984 SM00434 DNA Topoisomerase IV WYH_00996 SM00448 cheY-homologous receiver domain WYH_00996 SM00862 Transcriptional regulatory protein, C terminal WYH_00997 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WYH_00997 SM00387 Histidine kinase-like ATPases WYH_00997 SM00388 His Kinase A (phosphoacceptor) domain WYH_01002 SM00967 RNA 2'-O ribose methyltransferase substrate binding WYH_01009 SM00493 WYH_01009 WYH_01011 SM00869 Autotransporter beta-domain WYH_01018 SM00271 DnaJ molecular chaperone homology domain WYH_01031 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. WYH_01033 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WYH_01033 SM00465 GIY-YIG type nucleases (URI domain) WYH_01036 SM00316 Ribosomal protein S1-like RNA-binding domain WYH_01041 SM00100 Cyclic nucleotide-monophosphate binding domain WYH_01041 SM00419 helix_turn_helix, cAMP Regulatory protein WYH_01043 SM00729 Elongator protein 3, MiaB family, Radical SAM WYH_01055 SM01211 WYH_01055 WYH_01056 SM00052 Putative diguanylate phosphodiesterase WYH_01056 SM00267 diguanylate cyclase WYH_01064 SM00849 Metallo-beta-lactamase superfamily WYH_01064 SM01027 Beta-Casp domain WYH_01069 SM00382 ATPases associated with a variety of cellular activities WYH_01080 SM00052 Putative diguanylate phosphodiesterase WYH_01081 SM00267 diguanylate cyclase WYH_01087 SM00342 helix_turn_helix, arabinose operon control protein WYH_01101 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_01105 SM00746 metallochaperone-like domain WYH_01119 SM00562 WYH_01119 WYH_01126 SM00650 Ribosomal RNA adenine dimethylases WYH_01144 SM00564 beta-propeller repeat WYH_01145 SM00564 beta-propeller repeat WYH_01151 SM00564 beta-propeller repeat WYH_01154 SM00564 beta-propeller repeat WYH_01157 SM00564 beta-propeller repeat WYH_01161 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) WYH_01161 SM00091 PAS domain WYH_01161 SM00911 HWE histidine kinase WYH_01167 SM01329 WYH_01167 WYH_01172 SM00363 S4 RNA-binding domain WYH_01175 SM00880 WYH_01175 WYH_01188 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_01201 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. WYH_01214 SM00932 Scaffold protein Nfu/NifU N terminal WYH_01220 SM00563 Phosphate acyltransferases WYH_01221 SM00729 Elongator protein 3, MiaB family, Radical SAM WYH_01226 SM00116 Domain in cystathionine beta-synthase and other proteins. WYH_01226 SM01091 Transporter associated domain WYH_01231 SM00924 MgtE intracellular N domain WYH_01239 SM00478 endonuclease III WYH_01239 SM00525 WYH_01239 WYH_01244 SM00422 helix_turn_helix, mercury resistance WYH_01251 SM00564 beta-propeller repeat WYH_01270 SM00729 Elongator protein 3, MiaB family, Radical SAM WYH_01272 SM00905 Dihydroneopterin aldolase WYH_01290 SM00732 Likely ribonuclease with RNase H fold. WYH_01308 SM00382 ATPases associated with a variety of cellular activities WYH_01314 SM00382 ATPases associated with a variety of cellular activities WYH_01321 SM00450 Rhodanese Homology Domain WYH_01330 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase WYH_01338 SM00864 Tubulin/FtsZ family, GTPase domain WYH_01338 SM00865 Tubulin/FtsZ family, C-terminal domain WYH_01339 SM00842 Cell division protein FtsA WYH_01358 SM00478 endonuclease III WYH_01361 SM00382 ATPases associated with a variety of cellular activities WYH_01371 SM00859 Semialdehyde dehydrogenase, NAD binding domain WYH_01372 SM00938 Nitrogen regulatory protein P-II WYH_01373 SM01230 WYH_01373 WYH_01391 SM00836 DALR anticodon binding domain WYH_01391 SM01016 Arginyl tRNA synthetase N terminal dom WYH_01405 SM00858 WYH_01405 WYH_01411 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_01415 SM00028 Tetratricopeptide repeats WYH_01416 SM00382 ATPases associated with a variety of cellular activities WYH_01416 SM01086 C-terminal, D2-small domain, of ClpB protein WYH_01420 SM00845 GatB domain WYH_01434 SM00382 ATPases associated with a variety of cellular activities WYH_01439 SM00448 cheY-homologous receiver domain WYH_01456 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_01460 SM00382 ATPases associated with a variety of cellular activities WYH_01461 SM00052 Putative diguanylate phosphodiesterase WYH_01461 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) WYH_01461 SM00091 PAS domain WYH_01461 SM00267 diguanylate cyclase WYH_01464 SM00382 ATPases associated with a variety of cellular activities WYH_01464 SM00994 ClpX C4-type zinc finger WYH_01464 SM01086 C-terminal, D2-small domain, of ClpB protein WYH_01469 SM00363 S4 RNA-binding domain WYH_01470 SM00232 JAB/MPN domain WYH_01472 SM00644 WYH_01472 WYH_01482 SM00671 Sel1-like repeats. WYH_01485 SM00028 Tetratricopeptide repeats WYH_01495 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WYH_01496 SM01092 CO dehydrogenase flavoprotein C-terminal domain WYH_01510 SM00729 Elongator protein 3, MiaB family, Radical SAM WYH_01515 SM00460 Transglutaminase/protease-like homologues WYH_01525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. WYH_01529 SM00849 Metallo-beta-lactamase superfamily WYH_01541 SM01007 Class II Aldolase and Adducin N-terminal domain WYH_01544 SM00342 helix_turn_helix, arabinose operon control protein WYH_01549 SM00829 Enoylreductase WYH_01550 SM00829 Enoylreductase WYH_01552 SM00448 cheY-homologous receiver domain WYH_01553 SM00448 cheY-homologous receiver domain WYH_01572 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_01581 SM00382 ATPases associated with a variety of cellular activities WYH_01584 SM00849 Metallo-beta-lactamase superfamily WYH_01585 SM00382 ATPases associated with a variety of cellular activities WYH_01588 SM00911 HWE histidine kinase WYH_01588 SM01079 WYH_01588 WYH_01592 SM00267 diguanylate cyclase WYH_01603 SM00450 Rhodanese Homology Domain WYH_01604 SM00487 DEAD-like helicases superfamily WYH_01604 SM00490 helicase superfamily c-terminal domain WYH_01612 SM00382 ATPases associated with a variety of cellular activities WYH_01613 SM00327 von Willebrand factor (vWF) type A domain WYH_01629 SM00382 ATPases associated with a variety of cellular activities WYH_01630 SM00278 Helix-hairpin-helix DNA-binding motif class 1 WYH_01636 SM00925 MltA specific insert domain WYH_01637 SM00978 WYH_01637 WYH_01648 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain WYH_01648 SM01232 WYH_01648 WYH_01650 SM00382 ATPases associated with a variety of cellular activities WYH_01650 SM00760 Bacterial dnaA protein helix-turn-helix domain WYH_01655 SM00478 endonuclease III WYH_01655 SM00525 WYH_01655 WYH_01665 SM01234 WYH_01665 WYH_01670 SM00564 beta-propeller repeat WYH_01682 SM01060 WYH_01682 WYH_01689 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_01695 SM00387 Histidine kinase-like ATPases WYH_01698 SM00155 Phospholipase D. Active site motifs. WYH_01725 SM00382 ATPases associated with a variety of cellular activities WYH_01727 SM00155 Phospholipase D. Active site motifs. WYH_01728 SM01409 WYH_01728 WYH_01731 SM00382 ATPases associated with a variety of cellular activities WYH_01736 SM00530 Helix-turn-helix XRE-family like proteins WYH_01750 SM00382 ATPases associated with a variety of cellular activities WYH_01779 SM00849 Metallo-beta-lactamase superfamily WYH_01781 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor WYH_01785 SM00450 Rhodanese Homology Domain WYH_01789 SM00382 ATPases associated with a variety of cellular activities WYH_01790 SM00382 ATPases associated with a variety of cellular activities WYH_01794 SM00984 UDP binding domain WYH_01809 SM00421 helix_turn_helix, Lux Regulon WYH_01811 SM00861 Transketolase, pyrimidine binding domain WYH_01821 SM00984 UDP binding domain WYH_01822 SM00421 helix_turn_helix, Lux Regulon WYH_01824 SM00530 Helix-turn-helix XRE-family like proteins WYH_01825 SM01150 WYH_01825 WYH_01841 SM00448 cheY-homologous receiver domain WYH_01841 SM00862 Transcriptional regulatory protein, C terminal WYH_01842 SM00387 Histidine kinase-like ATPases WYH_01844 SM00822 WYH_01844 WYH_01851 SM00849 Metallo-beta-lactamase superfamily WYH_01882 SM00882 Coenzyme A transferase WYH_01883 SM00882 Coenzyme A transferase WYH_01884 SM00346 helix_turn_helix isocitrate lyase regulation WYH_01886 SM00028 Tetratricopeptide repeats WYH_01888 SM00421 helix_turn_helix, Lux Regulon WYH_01888 SM00448 cheY-homologous receiver domain WYH_01889 SM00422 helix_turn_helix, mercury resistance WYH_01921 SM00564 beta-propeller repeat WYH_01926 SM00829 Enoylreductase WYH_01968 SM00382 ATPases associated with a variety of cellular activities WYH_01982 SM00382 ATPases associated with a variety of cellular activities WYH_02008 SM00422 helix_turn_helix, mercury resistance WYH_02011 SM00470 ParB-like nuclease domain WYH_02014 SM00464 Found in ATP-dependent protease La (LON) WYH_02024 SM00318 Staphylococcal nuclease homologues WYH_02034 SM00382 ATPases associated with a variety of cellular activities WYH_02038 SM00098 Alkaline phosphatase homologues WYH_02047 SM00387 Histidine kinase-like ATPases WYH_02047 SM00433 TopoisomeraseII WYH_02053 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. WYH_02053 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) WYH_02053 SM00091 PAS domain WYH_02053 SM00911 HWE histidine kinase WYH_02054 SM00382 ATPases associated with a variety of cellular activities WYH_02058 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WYH_02063 SM00843 WYH_02063 WYH_02066 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_02068 SM00382 ATPases associated with a variety of cellular activities WYH_02069 SM00903 Flavin reductase like domain WYH_02070 SM01002 Alanine dehydrogenase/PNT, C-terminal domain WYH_02070 SM01003 Alanine dehydrogenase/PNT, N-terminal domain WYH_02071 SM00267 diguanylate cyclase WYH_02077 SM00448 cheY-homologous receiver domain WYH_02077 SM00862 Transcriptional regulatory protein, C terminal WYH_02078 SM00387 Histidine kinase-like ATPases WYH_02078 SM00388 His Kinase A (phosphoacceptor) domain WYH_02080 SM00382 ATPases associated with a variety of cellular activities WYH_02092 SM00244 prohibitin homologues WYH_02093 SM00341 Helicase and RNase D C-terminal WYH_02093 SM00487 DEAD-like helicases superfamily WYH_02093 SM00490 helicase superfamily c-terminal domain WYH_02093 SM00956 WYH_02093 WYH_02099 SM00382 ATPases associated with a variety of cellular activities WYH_02109 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_02111 SM00986 Uracil DNA glycosylase superfamily WYH_02111 SM00987 UreE urease accessory protein, C-terminal domain WYH_02112 SM00474 3'-5' exonuclease WYH_02115 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain WYH_02127 SM00421 helix_turn_helix, Lux Regulon WYH_02128 SM00822 WYH_02128 WYH_02140 SM00382 ATPases associated with a variety of cellular activities WYH_02149 SM00849 Metallo-beta-lactamase superfamily WYH_02151 SM00849 Metallo-beta-lactamase superfamily WYH_02153 SM00342 helix_turn_helix, arabinose operon control protein WYH_02167 SM00411 bacterial (prokaryotic) histone like domain WYH_02168 SM00345 helix_turn_helix gluconate operon transcriptional repressor WYH_02173 SM00861 Transketolase, pyrimidine binding domain WYH_02177 SM00798 AICARFT/IMPCHase bienzyme WYH_02177 SM00851 MGS-like domain WYH_02187 SM00530 Helix-turn-helix XRE-family like proteins WYH_02197 SM00813 Alpha-L-arabinofuranosidase C-terminus WYH_02199 SM00345 helix_turn_helix gluconate operon transcriptional repressor WYH_02199 SM00895 WYH_02199 WYH_02203 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. WYH_02209 SM01217 WYH_02209 WYH_02212 SM00354 helix_turn _helix lactose operon repressor WYH_02221 SM00091 PAS domain WYH_02221 SM00421 helix_turn_helix, Lux Regulon WYH_02223 SM00481 DNA polymerase alpha chain like domain WYH_02237 SM00387 Histidine kinase-like ATPases WYH_02238 SM00448 cheY-homologous receiver domain WYH_02238 SM00850 LytTr DNA-binding domain WYH_02248 SM01209 WYH_02248 WYH_02248 SM01210 WYH_02248 WYH_02274 SM00062 Bacterial periplasmic substrate-binding proteins WYH_02274 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. WYH_02279 SM00448 cheY-homologous receiver domain WYH_02279 SM00850 LytTr DNA-binding domain WYH_02280 SM00387 Histidine kinase-like ATPases WYH_02287 SM00116 Domain in cystathionine beta-synthase and other proteins. WYH_02295 SM00479 WYH_02295 WYH_02302 SM00357 Cold shock protein domain WYH_02302 SM00382 ATPases associated with a variety of cellular activities WYH_02302 SM00959 Rho termination factor, N-terminal domain WYH_02306 SM01228 WYH_02306 WYH_02309 SM00470 ParB-like nuclease domain WYH_02311 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. WYH_02317 SM01058 CarD-like/TRCF domain WYH_02319 SM00490 helicase superfamily c-terminal domain WYH_02321 SM01004 Delta-aminolevulinic acid dehydratase WYH_02324 SM01152 WYH_02324 WYH_02327 SM00849 Metallo-beta-lactamase superfamily WYH_02329 SM00382 ATPases associated with a variety of cellular activities WYH_02329 SM01086 C-terminal, D2-small domain, of ClpB protein WYH_02331 SM00829 Enoylreductase WYH_02344 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WYH_02344 SM00245 tail specific protease WYH_02349 SM00984 UDP binding domain WYH_02352 SM00271 DnaJ molecular chaperone homology domain WYH_02367 SM00893 Electron transfer flavoprotein domain WYH_02368 SM00893 Electron transfer flavoprotein domain WYH_02372 SM01091 Transporter associated domain WYH_02376 SM00904 Riboflavin kinase WYH_02379 SM01001 AIR carboxylase WYH_02380 SM00855 Phosphoglycerate mutase family WYH_02406 SM00271 DnaJ molecular chaperone homology domain WYH_02409 SM00487 DEAD-like helicases superfamily WYH_02409 SM00490 helicase superfamily c-terminal domain WYH_02417 SM01400 WYH_02417 WYH_02423 SM00342 helix_turn_helix, arabinose operon control protein WYH_02425 SM00873 B3/4 domain WYH_02425 SM00874 tRNA synthetase B5 domain WYH_02425 SM00896 Ferredoxin-fold anticodon binding domain WYH_02429 SM00938 Nitrogen regulatory protein P-II WYH_02432 SM00938 Nitrogen regulatory protein P-II WYH_02437 SM00357 Cold shock protein domain WYH_02458 SM00448 cheY-homologous receiver domain WYH_02463 SM00671 Sel1-like repeats. WYH_02468 SM00533 DNA-binding domain of DNA mismatch repair MUTS family WYH_02468 SM00534 ATPase domain of DNA mismatch repair MUTS family WYH_02475 SM00507 HNH nucleases WYH_02476 SM00919 Malic enzyme, NAD binding domain WYH_02476 SM01274 WYH_02476 WYH_02486 SM00470 ParB-like nuclease domain WYH_02507 SM00422 helix_turn_helix, mercury resistance WYH_02512 SM00382 ATPases associated with a variety of cellular activities WYH_02517 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain WYH_02518 SM01400 WYH_02518 WYH_02519 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain WYH_02520 SM00849 Metallo-beta-lactamase superfamily WYH_02520 SM01027 Beta-Casp domain WYH_02533 SM00563 Phosphate acyltransferases WYH_02535 SM00155 Phospholipase D. Active site motifs. WYH_02536 SM01068 Putative carbohydrate binding domain WYH_02560 SM00530 Helix-turn-helix XRE-family like proteins WYH_02583 SM00450 Rhodanese Homology Domain WYH_02583 SM00849 Metallo-beta-lactamase superfamily WYH_02590 SM00746 metallochaperone-like domain WYH_02599 SM00448 cheY-homologous receiver domain WYH_02599 SM00862 Transcriptional regulatory protein, C terminal WYH_02601 SM00382 ATPases associated with a variety of cellular activities WYH_02603 SM00749 bacterial OsmY and nodulation domain WYH_02608 SM00937 WYH_02608 WYH_02615 SM00882 Coenzyme A transferase WYH_02617 SM00882 Coenzyme A transferase WYH_02618 SM00382 ATPases associated with a variety of cellular activities WYH_02618 SM01072 Cell division protein 48 (CDC48) domain 2 WYH_02618 SM01073 Cell division protein 48 (CDC48) N-terminal domain WYH_02620 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs WYH_02620 SM00474 3'-5' exonuclease WYH_02620 SM00475 5'-3' exonuclease WYH_02620 SM00482 DNA polymerase A domain WYH_02626 SM00883 Chaperonin 10 Kd subunit WYH_02631 SM00530 Helix-turn-helix XRE-family like proteins WYH_02635 SM00663 RNA polymerase I subunit A N-terminus WYH_02643 SM00073 Histidine Phosphotransfer domain WYH_02643 SM00260 Two component signalling adaptor domain WYH_02643 SM00387 Histidine kinase-like ATPases WYH_02643 SM01231 WYH_02643 WYH_02644 SM00260 Two component signalling adaptor domain WYH_02645 SM00448 cheY-homologous receiver domain WYH_02646 SM00448 cheY-homologous receiver domain WYH_02647 SM00138 Methyltransferase, chemotaxis proteins WYH_02648 SM00052 Putative diguanylate phosphodiesterase WYH_02648 SM00267 diguanylate cyclase WYH_02649 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). WYH_02649 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WYH_02655 SM00867 YceI-like domain WYH_02658 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) WYH_02658 SM00091 PAS domain WYH_02658 SM00387 Histidine kinase-like ATPases WYH_02658 SM00388 His Kinase A (phosphoacceptor) domain WYH_02659 SM00421 helix_turn_helix, Lux Regulon WYH_02659 SM00448 cheY-homologous receiver domain WYH_02661 SM00829 Enoylreductase WYH_02667 SM00100 Cyclic nucleotide-monophosphate binding domain WYH_02669 SM00749 bacterial OsmY and nodulation domain WYH_02670 SM00387 Histidine kinase-like ATPases WYH_02675 SM00749 bacterial OsmY and nodulation domain WYH_02679 SM00382 ATPases associated with a variety of cellular activities WYH_02683 SM00155 Phospholipase D. Active site motifs. WYH_02686 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WYH_02689 SM00419 helix_turn_helix, cAMP Regulatory protein WYH_02701 SM00382 ATPases associated with a variety of cellular activities WYH_02710 SM00530 Helix-turn-helix XRE-family like proteins WYH_02725 SM00470 ParB-like nuclease domain WYH_02732 SM00883 Chaperonin 10 Kd subunit WYH_02745 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen WYH_02749 SM00831 Cation transporter/ATPase, N-terminus WYH_02764 SM00382 ATPases associated with a variety of cellular activities WYH_02767 SM00563 Phosphate acyltransferases WYH_02774 SM00926 Molybdopterin oxidoreductase Fe4S4 domain WYH_02774 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region WYH_02776 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region WYH_02781 SM00829 Enoylreductase WYH_02783 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_02800 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. WYH_02801 SM00244 prohibitin homologues WYH_02802 SM00244 prohibitin homologues WYH_02804 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WYH_02808 SM00465 GIY-YIG type nucleases (URI domain) WYH_02817 SM00382 ATPases associated with a variety of cellular activities WYH_02827 SM00344 helix_turn_helix ASNC type WYH_02834 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. WYH_02834 SM00448 cheY-homologous receiver domain WYH_02834 SM00911 HWE histidine kinase WYH_02850 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. WYH_02850 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. WYH_02852 SM00972 Spore Coat Protein U domain WYH_02855 SM00972 Spore Coat Protein U domain WYH_02856 SM00649 Ribosomal protein L11/L12 WYH_02859 SM00852 Probable molybdopterin binding domain WYH_02866 SM00346 helix_turn_helix isocitrate lyase regulation WYH_02871 SM00822 WYH_02871 WYH_02878 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_02882 SM00822 WYH_02882 WYH_02888 SM00564 beta-propeller repeat WYH_02894 SM00342 helix_turn_helix, arabinose operon control protein WYH_02898 SM00829 Enoylreductase WYH_02910 SM00382 ATPases associated with a variety of cellular activities WYH_02917 SM00862 Transcriptional regulatory protein, C terminal WYH_02923 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_02930 SM01068 Putative carbohydrate binding domain WYH_02947 SM00248 ankyrin repeats WYH_02949 SM00899 WYH_02949 WYH_02956 SM00382 ATPases associated with a variety of cellular activities WYH_02956 SM01086 C-terminal, D2-small domain, of ClpB protein WYH_02962 SM00382 ATPases associated with a variety of cellular activities WYH_02980 SM00226 Low molecular weight phosphatase family WYH_02995 SM01120 WYH_02995 WYH_03004 SM00382 ATPases associated with a variety of cellular activities WYH_03016 SM00878 Biotin carboxylase C-terminal domain WYH_03027 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WYH_03034 SM00357 Cold shock protein domain WYH_03043 SM00151 SWI complex, BAF60b domains WYH_03046 SM00530 Helix-turn-helix XRE-family like proteins WYH_03057 SM00072 Guanylate kinase homologues. WYH_03074 SM00271 DnaJ molecular chaperone homology domain WYH_03082 SM01263 WYH_03082 WYH_03084 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. WYH_03084 SM00954 Region found in RelA / SpoT proteins WYH_03088 SM00448 cheY-homologous receiver domain WYH_03088 SM00862 Transcriptional regulatory protein, C terminal WYH_03089 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WYH_03089 SM00387 Histidine kinase-like ATPases WYH_03089 SM00388 His Kinase A (phosphoacceptor) domain WYH_03091 SM01225 WYH_03091 WYH_03102 SM00448 cheY-homologous receiver domain WYH_03102 SM00862 Transcriptional regulatory protein, C terminal WYH_03103 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain WYH_03103 SM00387 Histidine kinase-like ATPases WYH_03104 SM00947 Carbonic anhydrase WYH_03107 SM00849 Metallo-beta-lactamase superfamily WYH_03122 SM00564 beta-propeller repeat WYH_03124 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_03126 SM00052 Putative diguanylate phosphodiesterase WYH_03126 SM01080 WYH_03126 WYH_03130 SM00267 diguanylate cyclase WYH_03131 SM00421 helix_turn_helix, Lux Regulon WYH_03144 SM00382 ATPases associated with a variety of cellular activities WYH_03149 SM00382 ATPases associated with a variety of cellular activities WYH_03177 SM00382 ATPases associated with a variety of cellular activities WYH_03181 SM00382 ATPases associated with a variety of cellular activities WYH_03187 SM00564 beta-propeller repeat WYH_03188 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_03190 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WYH_03194 SM00878 Biotin carboxylase C-terminal domain WYH_03197 SM00729 Elongator protein 3, MiaB family, Radical SAM WYH_03197 SM00876 Biotin and Thiamin Synthesis associated domain WYH_03205 SM00878 Biotin carboxylase C-terminal domain WYH_03209 SM00342 helix_turn_helix, arabinose operon control protein WYH_03212 SM00448 cheY-homologous receiver domain WYH_03220 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_03222 SM00881 CoA binding domain WYH_03241 SM00487 DEAD-like helicases superfamily WYH_03241 SM00490 helicase superfamily c-terminal domain WYH_03247 SM00460 Transglutaminase/protease-like homologues WYH_03249 SM00421 helix_turn_helix, Lux Regulon WYH_03288 SM00470 ParB-like nuclease domain WYH_03294 SM00773 Proposed nucleic acid binding domain WYH_03295 SM00530 Helix-turn-helix XRE-family like proteins WYH_03300 SM00831 Cation transporter/ATPase, N-terminus WYH_03304 SM01225 WYH_03304 WYH_03305 SM00347 helix_turn_helix multiple antibiotic resistance protein WYH_03310 SM01225 WYH_03310 WYH_03313 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase WYH_03315 SM00014 Acid phosphatase homologues WYH_03325 SM00421 helix_turn_helix, Lux Regulon WYH_03329 SM00903 Flavin reductase like domain WYH_03332 SM00422 helix_turn_helix, mercury resistance WYH_03333 SM00345 helix_turn_helix gluconate operon transcriptional repressor WYH_03333 SM00895 WYH_03333 WYH_03343 SM00822 WYH_03343 WYH_03345 SM00893 Electron transfer flavoprotein domain WYH_03346 SM00893 Electron transfer flavoprotein domain