A6F68_00001 SM00760 Bacterial dnaA protein helix-turn-helix domain A6F68_00007 SM00478 endonuclease III A6F68_00007 SM00525 A6F68_00007 A6F68_00020 SM00382 ATPases associated with a variety of cellular activities A6F68_00021 SM00093 SERine Proteinase INhibitors A6F68_00037 SM00382 ATPases associated with a variety of cellular activities A6F68_00038 SM00155 Phospholipase D. Active site motifs. A6F68_00039 SM01409 A6F68_00039 A6F68_00042 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A6F68_00043 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain A6F68_00043 SM01080 A6F68_00043 A6F68_00055 SM00100 Cyclic nucleotide-monophosphate binding domain A6F68_00056 SM00028 Tetratricopeptide repeats A6F68_00057 SM00382 ATPases associated with a variety of cellular activities A6F68_00059 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F68_00059 SM00448 cheY-homologous receiver domain A6F68_00059 SM00911 HWE histidine kinase A6F68_00072 SM00354 helix_turn _helix lactose operon repressor A6F68_00081 SM00387 Histidine kinase-like ATPases A6F68_00081 SM00388 His Kinase A (phosphoacceptor) domain A6F68_00082 SM00382 ATPases associated with a variety of cellular activities A6F68_00082 SM00448 cheY-homologous receiver domain A6F68_00084 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_00085 SM00852 Probable molybdopterin binding domain A6F68_00088 SM00470 ParB-like nuclease domain A6F68_00095 SM01217 A6F68_00095 A6F68_00098 SM01119 A6F68_00098 A6F68_00121 SM00829 Enoylreductase A6F68_00138 SM00857 Resolvase, N terminal domain A6F68_00140 SM00530 Helix-turn-helix XRE-family like proteins A6F68_00148 SM00911 HWE histidine kinase A6F68_00153 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A6F68_00155 SM00244 prohibitin homologues A6F68_00156 SM00244 prohibitin homologues A6F68_00157 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F68_00167 SM00829 Enoylreductase A6F68_00171 SM00663 RNA polymerase I subunit A N-terminus A6F68_00175 SM00530 Helix-turn-helix XRE-family like proteins A6F68_00184 SM00883 Chaperonin 10 Kd subunit A6F68_00189 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A6F68_00189 SM00474 3'-5' exonuclease A6F68_00189 SM00475 5'-3' exonuclease A6F68_00189 SM00482 DNA polymerase A domain A6F68_00190 SM00911 HWE histidine kinase A6F68_00192 SM00382 ATPases associated with a variety of cellular activities A6F68_00192 SM01072 Cell division protein 48 (CDC48) domain 2 A6F68_00192 SM01073 Cell division protein 48 (CDC48) N-terminal domain A6F68_00193 SM00882 Coenzyme A transferase A6F68_00195 SM00882 Coenzyme A transferase A6F68_00203 SM00937 A6F68_00203 A6F68_00210 SM00382 ATPases associated with a variety of cellular activities A6F68_00212 SM00448 cheY-homologous receiver domain A6F68_00212 SM00862 Transcriptional regulatory protein, C terminal A6F68_00219 SM00919 Malic enzyme, NAD binding domain A6F68_00219 SM01274 A6F68_00219 A6F68_00220 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A6F68_00220 SM00534 ATPase domain of DNA mismatch repair MUTS family A6F68_00228 SM00507 HNH nucleases A6F68_00235 SM00671 Sel1-like repeats. A6F68_00241 SM00448 cheY-homologous receiver domain A6F68_00246 SM00226 Low molecular weight phosphatase family A6F68_00248 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A6F68_00249 SM00245 tail specific protease A6F68_00250 SM00344 helix_turn_helix ASNC type A6F68_00252 SM00100 Cyclic nucleotide-monophosphate binding domain A6F68_00252 SM00419 helix_turn_helix, cAMP Regulatory protein A6F68_00253 SM00849 Metallo-beta-lactamase superfamily A6F68_00254 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A6F68_00255 SM00450 Rhodanese Homology Domain A6F68_00285 SM00357 Cold shock protein domain A6F68_00294 SM00938 Nitrogen regulatory protein P-II A6F68_00297 SM00382 ATPases associated with a variety of cellular activities A6F68_00312 SM00244 prohibitin homologues A6F68_00316 SM00341 Helicase and RNase D C-terminal A6F68_00316 SM00487 DEAD-like helicases superfamily A6F68_00316 SM00490 helicase superfamily c-terminal domain A6F68_00316 SM00956 A6F68_00316 A6F68_00326 SM00382 ATPases associated with a variety of cellular activities A6F68_00338 SM00421 helix_turn_helix, Lux Regulon A6F68_00339 SM00986 Uracil DNA glycosylase superfamily A6F68_00339 SM00987 UreE urease accessory protein, C-terminal domain A6F68_00340 SM00474 3'-5' exonuclease A6F68_00349 SM00822 A6F68_00349 A6F68_00366 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A6F68_00370 SM00028 Tetratricopeptide repeats A6F68_00375 SM00382 ATPases associated with a variety of cellular activities A6F68_00388 SM00271 DnaJ molecular chaperone homology domain A6F68_00416 SM00858 A6F68_00416 A6F68_00424 SM00984 UDP binding domain A6F68_00429 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F68_00429 SM00245 tail specific protease A6F68_00442 SM00829 Enoylreductase A6F68_00444 SM00382 ATPases associated with a variety of cellular activities A6F68_00444 SM01086 C-terminal, D2-small domain, of ClpB protein A6F68_00453 SM01004 Delta-aminolevulinic acid dehydratase A6F68_00455 SM00490 helicase superfamily c-terminal domain A6F68_00456 SM00363 S4 RNA-binding domain A6F68_00458 SM01058 CarD-like/TRCF domain A6F68_00470 SM00972 Spore Coat Protein U domain A6F68_00471 SM00470 ParB-like nuclease domain A6F68_00474 SM01228 A6F68_00474 A6F68_00481 SM00357 Cold shock protein domain A6F68_00481 SM00382 ATPases associated with a variety of cellular activities A6F68_00481 SM00959 Rho termination factor, N-terminal domain A6F68_00488 SM00479 A6F68_00488 A6F68_00495 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F68_00502 SM00387 Histidine kinase-like ATPases A6F68_00503 SM00448 cheY-homologous receiver domain A6F68_00503 SM00850 LytTr DNA-binding domain A6F68_00521 SM00342 helix_turn_helix, arabinose operon control protein A6F68_00538 SM01209 A6F68_00538 A6F68_00538 SM01210 A6F68_00538 A6F68_00547 SM00448 cheY-homologous receiver domain A6F68_00547 SM00850 LytTr DNA-binding domain A6F68_00564 SM00226 Low molecular weight phosphatase family A6F68_00568 SM00054 EF-hand, calcium binding motif A6F68_00569 SM00448 cheY-homologous receiver domain A6F68_00569 SM00862 Transcriptional regulatory protein, C terminal A6F68_00570 SM00387 Histidine kinase-like ATPases A6F68_00570 SM00388 His Kinase A (phosphoacceptor) domain A6F68_00574 SM00873 B3/4 domain A6F68_00574 SM00874 tRNA synthetase B5 domain A6F68_00574 SM00896 Ferredoxin-fold anticodon binding domain A6F68_00576 SM00342 helix_turn_helix, arabinose operon control protein A6F68_00578 SM00342 helix_turn_helix, arabinose operon control protein A6F68_00579 SM00342 helix_turn_helix, arabinose operon control protein A6F68_00587 SM01400 A6F68_00587 A6F68_00601 SM00487 DEAD-like helicases superfamily A6F68_00601 SM00490 helicase superfamily c-terminal domain A6F68_00606 SM00271 DnaJ molecular chaperone homology domain A6F68_00624 SM00855 Phosphoglycerate mutase family A6F68_00625 SM01001 AIR carboxylase A6F68_00628 SM00904 Riboflavin kinase A6F68_00632 SM01091 Transporter associated domain A6F68_00636 SM00893 Electron transfer flavoprotein domain A6F68_00637 SM00893 Electron transfer flavoprotein domain A6F68_00648 SM00411 bacterial (prokaryotic) histone like domain A6F68_00649 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F68_00656 SM00861 Transketolase, pyrimidine binding domain A6F68_00663 SM00798 AICARFT/IMPCHase bienzyme A6F68_00663 SM00851 MGS-like domain A6F68_00668 SM00046 Diacylglycerol kinase catalytic domain (presumed) A6F68_00680 SM00464 Found in ATP-dependent protease La (LON) A6F68_00702 SM00382 ATPases associated with a variety of cellular activities A6F68_00708 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. A6F68_00710 SM00478 endonuclease III A6F68_00710 SM00525 A6F68_00710 A6F68_00711 SM00478 endonuclease III A6F68_00713 SM00478 endonuclease III A6F68_00720 SM00387 Histidine kinase-like ATPases A6F68_00720 SM00433 TopoisomeraseII A6F68_00725 SM00563 Phosphate acyltransferases A6F68_00729 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F68_00729 SM00091 PAS domain A6F68_00729 SM00911 HWE histidine kinase A6F68_00730 SM00382 ATPases associated with a variety of cellular activities A6F68_00736 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F68_00740 SM00382 ATPases associated with a variety of cellular activities A6F68_00740 SM00843 A6F68_00740 A6F68_00744 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A6F68_00744 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A6F68_00746 SM00382 ATPases associated with a variety of cellular activities A6F68_00749 SM00563 Phosphate acyltransferases A6F68_00755 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F68_00755 SM00895 A6F68_00755 A6F68_00780 SM00564 beta-propeller repeat A6F68_00784 SM00244 prohibitin homologues A6F68_00790 SM01007 Class II Aldolase and Adducin N-terminal domain A6F68_00792 SM01329 A6F68_00792 A6F68_00795 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F68_00795 SM00895 A6F68_00795 A6F68_00813 SM00612 A6F68_00813 A6F68_00830 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F68_00830 SM00895 A6F68_00830 A6F68_00837 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F68_00837 SM00895 A6F68_00837 A6F68_00842 SM00020 Trypsin-like serine protease A6F68_00844 SM00028 Tetratricopeptide repeats A6F68_00855 SM00912 haemagglutination activity domain A6F68_00864 SM00331 Sigma factor PP2C-like phosphatases A6F68_00864 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A6F68_00865 SM00219 Tyrosine kinase, catalytic domain A6F68_00866 SM00240 Forkhead associated domain A6F68_00878 SM00382 ATPases associated with a variety of cellular activities A6F68_00878 SM01086 C-terminal, D2-small domain, of ClpB protein A6F68_00887 SM00382 ATPases associated with a variety of cellular activities A6F68_00932 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A6F68_00932 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A6F68_00934 SM00649 Ribosomal protein L11/L12 A6F68_00938 SM00852 Probable molybdopterin binding domain A6F68_00941 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F68_00942 SM00052 Putative diguanylate phosphodiesterase A6F68_00942 SM00267 diguanylate cyclase A6F68_00943 SM00138 Methyltransferase, chemotaxis proteins A6F68_00944 SM00448 cheY-homologous receiver domain A6F68_00945 SM00448 cheY-homologous receiver domain A6F68_00946 SM00260 Two component signalling adaptor domain A6F68_00947 SM00073 Histidine Phosphotransfer domain A6F68_00947 SM00260 Two component signalling adaptor domain A6F68_00947 SM00387 Histidine kinase-like ATPases A6F68_00947 SM01231 A6F68_00947 A6F68_00952 SM01007 Class II Aldolase and Adducin N-terminal domain A6F68_00967 SM00849 Metallo-beta-lactamase superfamily A6F68_00972 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F68_00977 SM00460 Transglutaminase/protease-like homologues A6F68_00986 SM00419 helix_turn_helix, cAMP Regulatory protein A6F68_00988 SM00448 cheY-homologous receiver domain A6F68_00988 SM00862 Transcriptional regulatory protein, C terminal A6F68_00995 SM00382 ATPases associated with a variety of cellular activities A6F68_01010 SM00829 Enoylreductase A6F68_01029 SM00382 ATPases associated with a variety of cellular activities A6F68_01032 SM00316 Ribosomal protein S1-like RNA-binding domain A6F68_01032 SM00322 K homology RNA-binding domain A6F68_01041 SM01387 A6F68_01041 A6F68_01042 SM00316 Ribosomal protein S1-like RNA-binding domain A6F68_01042 SM00322 K homology RNA-binding domain A6F68_01044 SM00645 Papain family cysteine protease A6F68_01049 SM00992 Hemimethylated DNA-binding protein YccV like A6F68_01062 SM00342 helix_turn_helix, arabinose operon control protein A6F68_01069 SM00854 Bacterial capsule synthesis protein PGA_cap A6F68_01071 SM00903 Flavin reductase like domain A6F68_01074 SM00882 Coenzyme A transferase A6F68_01075 SM00882 Coenzyme A transferase A6F68_01087 SM00857 Resolvase, N terminal domain A6F68_01099 SM00028 Tetratricopeptide repeats A6F68_01101 SM00422 helix_turn_helix, mercury resistance A6F68_01105 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_01115 SM00419 helix_turn_helix, cAMP Regulatory protein A6F68_01117 SM00100 Cyclic nucleotide-monophosphate binding domain A6F68_01117 SM00419 helix_turn_helix, cAMP Regulatory protein A6F68_01128 SM00857 Resolvase, N terminal domain A6F68_01146 SM00978 A6F68_01146 A6F68_01147 SM00925 MltA specific insert domain A6F68_01152 SM01060 A6F68_01152 A6F68_01158 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6F68_01160 SM00382 ATPases associated with a variety of cellular activities A6F68_01164 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F68_01165 SM00450 Rhodanese Homology Domain A6F68_01185 SM00382 ATPases associated with a variety of cellular activities A6F68_01203 SM00911 HWE histidine kinase A6F68_01203 SM01079 A6F68_01203 A6F68_01204 SM00448 cheY-homologous receiver domain A6F68_01205 SM00419 helix_turn_helix, cAMP Regulatory protein A6F68_01206 SM00448 cheY-homologous receiver domain A6F68_01220 SM00421 helix_turn_helix, Lux Regulon A6F68_01229 SM00487 DEAD-like helicases superfamily A6F68_01229 SM00490 helicase superfamily c-terminal domain A6F68_01234 SM00460 Transglutaminase/protease-like homologues A6F68_01236 SM00421 helix_turn_helix, Lux Regulon A6F68_01251 SM00382 ATPases associated with a variety of cellular activities A6F68_01254 SM01329 A6F68_01254 A6F68_01262 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F68_01262 SM00091 PAS domain A6F68_01262 SM00911 HWE histidine kinase A6F68_01275 SM00838 Elongation factor G C-terminus A6F68_01275 SM00889 Elongation factor G, domain IV A6F68_01277 SM01403 A6F68_01277 A6F68_01281 SM01382 A6F68_01281 A6F68_01281 SM01383 A6F68_01281 A6F68_01284 SM00322 K homology RNA-binding domain A6F68_01288 SM01374 A6F68_01288 A6F68_01289 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A6F68_01303 SM00662 RNA polymerases D A6F68_01315 SM00861 Transketolase, pyrimidine binding domain A6F68_01316 SM00881 CoA binding domain A6F68_01319 SM00052 Putative diguanylate phosphodiesterase A6F68_01319 SM00267 diguanylate cyclase A6F68_01325 SM00382 ATPases associated with a variety of cellular activities A6F68_01357 SM01130 A6F68_01357 A6F68_01361 SM00387 Histidine kinase-like ATPases A6F68_01361 SM00388 His Kinase A (phosphoacceptor) domain A6F68_01361 SM00448 cheY-homologous receiver domain A6F68_01364 SM00382 ATPases associated with a variety of cellular activities A6F68_01366 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A6F68_01371 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_01373 SM01329 A6F68_01373 A6F68_01375 SM00448 cheY-homologous receiver domain A6F68_01380 SM00487 DEAD-like helicases superfamily A6F68_01380 SM00490 helicase superfamily c-terminal domain A6F68_01382 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen A6F68_01386 SM00363 S4 RNA-binding domain A6F68_01395 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A6F68_01397 SM00998 Adenylosuccinate lyase C-terminus A6F68_01409 SM00829 Enoylreductase A6F68_01412 SM00382 ATPases associated with a variety of cellular activities A6F68_01428 SM00845 GatB domain A6F68_01432 SM00267 diguanylate cyclase A6F68_01433 SM00530 Helix-turn-helix XRE-family like proteins A6F68_01435 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A6F68_01448 SM00271 DnaJ molecular chaperone homology domain A6F68_01468 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. A6F68_01472 SM00530 Helix-turn-helix XRE-family like proteins A6F68_01474 SM01230 A6F68_01474 A6F68_01475 SM00938 Nitrogen regulatory protein P-II A6F68_01476 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6F68_01478 SM01269 A6F68_01478 A6F68_01485 SM00382 ATPases associated with a variety of cellular activities A6F68_01489 SM00478 endonuclease III A6F68_01508 SM00842 Cell division protein FtsA A6F68_01509 SM00864 Tubulin/FtsZ family, GTPase domain A6F68_01509 SM00865 Tubulin/FtsZ family, C-terminal domain A6F68_01517 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A6F68_01518 SM00822 A6F68_01518 A6F68_01528 SM00450 Rhodanese Homology Domain A6F68_01536 SM00382 ATPases associated with a variety of cellular activities A6F68_01547 SM00788 Adenylosuccinate synthetase A6F68_01551 SM00448 cheY-homologous receiver domain A6F68_01560 SM00870 A6F68_01560 A6F68_01561 SM00829 Enoylreductase A6F68_01564 SM00493 A6F68_01564 A6F68_01569 SM00967 RNA 2'-O ribose methyltransferase substrate binding A6F68_01574 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F68_01574 SM00387 Histidine kinase-like ATPases A6F68_01574 SM00388 His Kinase A (phosphoacceptor) domain A6F68_01575 SM00448 cheY-homologous receiver domain A6F68_01575 SM00862 Transcriptional regulatory protein, C terminal A6F68_01589 SM00434 DNA Topoisomerase IV A6F68_01602 SM00822 A6F68_01602 A6F68_01603 SM00382 ATPases associated with a variety of cellular activities A6F68_01603 SM00448 cheY-homologous receiver domain A6F68_01605 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A6F68_01605 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A6F68_01611 SM00710 Parallel beta-helix repeats A6F68_01616 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F68_01619 SM00732 Likely ribonuclease with RNase H fold. A6F68_01637 SM00905 Dihydroneopterin aldolase A6F68_01646 SM00245 tail specific protease A6F68_01647 SM00151 SWI complex, BAF60b domains A6F68_01656 SM00829 Enoylreductase A6F68_01668 SM00072 Guanylate kinase homologues. A6F68_01685 SM00271 DnaJ molecular chaperone homology domain A6F68_01692 SM00100 Cyclic nucleotide-monophosphate binding domain A6F68_01700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F68_01700 SM00954 Region found in RelA / SpoT proteins A6F68_01709 SM00354 helix_turn _helix lactose operon repressor A6F68_01711 SM00822 A6F68_01711 A6F68_01719 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F68_01719 SM00895 A6F68_01719 A6F68_01720 SM00710 Parallel beta-helix repeats A6F68_01723 SM00822 A6F68_01723 A6F68_01744 SM00363 S4 RNA-binding domain A6F68_01763 SM00448 cheY-homologous receiver domain A6F68_01764 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F68_01764 SM00911 HWE histidine kinase A6F68_01765 SM00650 Ribosomal RNA adenine dimethylases A6F68_01771 SM00562 A6F68_01771 A6F68_01781 SM00822 A6F68_01781 A6F68_01788 SM00382 ATPases associated with a variety of cellular activities A6F68_01794 SM00342 helix_turn_helix, arabinose operon control protein A6F68_01800 SM00487 DEAD-like helicases superfamily A6F68_01800 SM00490 helicase superfamily c-terminal domain A6F68_01813 SM00849 Metallo-beta-lactamase superfamily A6F68_01824 SM00411 bacterial (prokaryotic) histone like domain A6F68_01825 SM00422 helix_turn_helix, mercury resistance A6F68_01830 SM00478 endonuclease III A6F68_01830 SM00525 A6F68_01830 A6F68_01836 SM00924 MgtE intracellular N domain A6F68_01840 SM01091 Transporter associated domain A6F68_01844 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_01845 SM00563 Phosphate acyltransferases A6F68_01851 SM00932 Scaffold protein Nfu/NifU N terminal A6F68_01854 SM00829 Enoylreductase A6F68_01869 SM00052 Putative diguanylate phosphodiesterase A6F68_01869 SM00267 diguanylate cyclase A6F68_01873 SM01207 A6F68_01873 A6F68_01875 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A6F68_01875 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A6F68_01875 SM00493 A6F68_01875 A6F68_01878 SM00358 Double-stranded RNA binding motif A6F68_01878 SM00535 Ribonuclease III family A6F68_01882 SM00487 DEAD-like helicases superfamily A6F68_01882 SM00490 helicase superfamily c-terminal domain A6F68_01885 SM00822 A6F68_01885 A6F68_01893 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_01893 SM00876 Biotin and Thiamin Synthesis associated domain A6F68_01895 SM00878 Biotin carboxylase C-terminal domain A6F68_01909 SM00155 Phospholipase D. Active site motifs. A6F68_01914 SM00996 S-adenosyl-L-homocysteine hydrolase A6F68_01914 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A6F68_01915 SM00091 PAS domain A6F68_01915 SM00387 Histidine kinase-like ATPases A6F68_01915 SM00388 His Kinase A (phosphoacceptor) domain A6F68_01926 SM00957 SecA DEAD-like domain A6F68_01926 SM00958 SecA preprotein cross-linking domain A6F68_01931 SM00052 Putative diguanylate phosphodiesterase A6F68_01935 SM00292 breast cancer carboxy-terminal domain A6F68_01935 SM00532 Ligase N family A6F68_01939 SM00849 Metallo-beta-lactamase superfamily A6F68_01948 SM00862 Transcriptional regulatory protein, C terminal A6F68_01954 SM00822 A6F68_01954 A6F68_01956 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F68_01956 SM01240 A6F68_01956 A6F68_01958 SM00028 Tetratricopeptide repeats A6F68_01964 SM00014 Acid phosphatase homologues A6F68_01971 SM00382 ATPases associated with a variety of cellular activities A6F68_01974 SM00481 DNA polymerase alpha chain like domain A6F68_01987 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F68_01989 SM00382 ATPases associated with a variety of cellular activities A6F68_01990 SM00387 Histidine kinase-like ATPases A6F68_01990 SM00433 TopoisomeraseII A6F68_02002 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A6F68_02003 SM00822 A6F68_02003 A6F68_02004 SM00480 DNA polymerase III beta subunit A6F68_02009 SM00052 Putative diguanylate phosphodiesterase A6F68_02009 SM00267 diguanylate cyclase A6F68_02010 SM00052 Putative diguanylate phosphodiesterase A6F68_02010 SM00091 PAS domain A6F68_02010 SM00267 diguanylate cyclase A6F68_02020 SM00028 Tetratricopeptide repeats A6F68_02020 SM00862 Transcriptional regulatory protein, C terminal A6F68_02021 SM00052 Putative diguanylate phosphodiesterase A6F68_02021 SM01080 A6F68_02021 A6F68_02022 SM00487 DEAD-like helicases superfamily A6F68_02022 SM00490 helicase superfamily c-terminal domain A6F68_02022 SM00982 A6F68_02022 A6F68_02022 SM01058 CarD-like/TRCF domain A6F68_02025 SM00487 DEAD-like helicases superfamily A6F68_02025 SM00490 helicase superfamily c-terminal domain A6F68_02031 SM00861 Transketolase, pyrimidine binding domain A6F68_02040 SM00861 Transketolase, pyrimidine binding domain A6F68_02041 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6F68_02050 SM00841 Elongation factor P, C-terminal A6F68_02050 SM01185 A6F68_02050 A6F68_02057 SM00530 Helix-turn-helix XRE-family like proteins A6F68_02060 SM00387 Histidine kinase-like ATPases A6F68_02061 SM00382 ATPases associated with a variety of cellular activities A6F68_02061 SM00448 cheY-homologous receiver domain A6F68_02072 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_02073 SM00986 Uracil DNA glycosylase superfamily A6F68_02073 SM00987 UreE urease accessory protein, C-terminal domain A6F68_02074 SM00481 DNA polymerase alpha chain like domain A6F68_02079 SM00448 cheY-homologous receiver domain A6F68_02079 SM00862 Transcriptional regulatory protein, C terminal A6F68_02081 SM00382 ATPases associated with a variety of cellular activities A6F68_02084 SM00387 Histidine kinase-like ATPases A6F68_02084 SM00388 His Kinase A (phosphoacceptor) domain A6F68_02094 SM00917 LeuA allosteric (dimerisation) domain A6F68_02115 SM00382 ATPases associated with a variety of cellular activities A6F68_02121 SM00363 S4 RNA-binding domain A6F68_02121 SM01390 A6F68_02121 A6F68_02122 SM00830 Chorismate mutase type II A6F68_02130 SM00400 zinc finger A6F68_02130 SM00493 A6F68_02130 A6F68_02133 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A6F68_02135 SM00851 MGS-like domain A6F68_02135 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A6F68_02142 SM01192 A6F68_02142 A6F68_02142 SM01193 A6F68_02142 A6F68_02144 SM00587 ZnF_C4 abd HLH domain containing kinases domain A6F68_02152 SM00936 Penicillin-binding protein 5, C-terminal domain A6F68_02162 SM00382 ATPases associated with a variety of cellular activities A6F68_02162 SM00448 cheY-homologous receiver domain A6F68_02163 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F68_02163 SM00387 Histidine kinase-like ATPases A6F68_02163 SM00388 His Kinase A (phosphoacceptor) domain A6F68_02164 SM00382 ATPases associated with a variety of cellular activities A6F68_02164 SM00448 cheY-homologous receiver domain A6F68_02165 SM00091 PAS domain A6F68_02165 SM00387 Histidine kinase-like ATPases A6F68_02165 SM00388 His Kinase A (phosphoacceptor) domain A6F68_02171 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_02174 SM00947 Carbonic anhydrase A6F68_02177 SM00434 DNA Topoisomerase IV A6F68_02189 SM00861 Transketolase, pyrimidine binding domain A6F68_02217 SM00387 Histidine kinase-like ATPases A6F68_02223 SM00849 Metallo-beta-lactamase superfamily A6F68_02233 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A6F68_02238 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A6F68_02253 SM00287 Bacterial SH3 domain homologues A6F68_02258 SM00937 A6F68_02258 A6F68_02261 SM00646 A6F68_02261 A6F68_02278 SM00382 ATPases associated with a variety of cellular activities A6F68_02298 SM00852 Probable molybdopterin binding domain A6F68_02300 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_02305 SM00422 helix_turn_helix, mercury resistance A6F68_02313 SM00530 Helix-turn-helix XRE-family like proteins A6F68_02323 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F68_02328 SM00853 MutL C terminal dimerisation domain A6F68_02328 SM01340 A6F68_02328 A6F68_02346 SM00530 Helix-turn-helix XRE-family like proteins A6F68_02347 SM00316 Ribosomal protein S1-like RNA-binding domain A6F68_02347 SM00955 A6F68_02347 A6F68_02351 SM00946 Prolyl-tRNA synthetase, C-terminal A6F68_02353 SM01005 Alanine racemase, C-terminal domain A6F68_02357 SM00382 ATPases associated with a variety of cellular activities A6F68_02359 SM00849 Metallo-beta-lactamase superfamily A6F68_02360 SM00226 Low molecular weight phosphatase family A6F68_02361 SM00271 DnaJ molecular chaperone homology domain A6F68_02373 SM00198 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. A6F68_02374 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_02384 SM00347 helix_turn_helix multiple antibiotic resistance protein A6F68_02390 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6F68_02396 SM00382 ATPases associated with a variety of cellular activities A6F68_02396 SM00962 SRP54-type protein, GTPase domain A6F68_02396 SM00963 SRP54-type protein, helical bundle domain A6F68_02402 SM00316 Ribosomal protein S1-like RNA-binding domain A6F68_02403 SM00849 Metallo-beta-lactamase superfamily A6F68_02405 SM00829 Enoylreductase A6F68_02418 SM00984 UDP binding domain A6F68_02421 SM00644 A6F68_02421 A6F68_02423 SM00232 JAB/MPN domain A6F68_02424 SM00363 S4 RNA-binding domain A6F68_02430 SM00382 ATPases associated with a variety of cellular activities A6F68_02430 SM00994 ClpX C4-type zinc finger A6F68_02430 SM01086 C-terminal, D2-small domain, of ClpB protein A6F68_02443 SM00671 Sel1-like repeats. A6F68_02453 SM00862 Transcriptional regulatory protein, C terminal A6F68_02458 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A6F68_02468 SM00382 ATPases associated with a variety of cellular activities A6F68_02478 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_02487 SM00448 cheY-homologous receiver domain A6F68_02491 SM00822 A6F68_02491 A6F68_02508 SM00642 Alpha-amylase domain A6F68_02512 SM00642 Alpha-amylase domain A6F68_02522 SM00100 Cyclic nucleotide-monophosphate binding domain A6F68_02524 SM00849 Metallo-beta-lactamase superfamily A6F68_02526 SM00825 Beta-ketoacyl synthase A6F68_02527 SM00823 Phosphopantetheine attachment site A6F68_02531 SM00341 Helicase and RNase D C-terminal A6F68_02531 SM00474 3'-5' exonuclease A6F68_02540 SM00052 Putative diguanylate phosphodiesterase A6F68_02540 SM00267 diguanylate cyclase A6F68_02542 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F68_02543 SM00382 ATPases associated with a variety of cellular activities A6F68_02543 SM00962 SRP54-type protein, GTPase domain A6F68_02543 SM00963 SRP54-type protein, helical bundle domain A6F68_02555 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A6F68_02557 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F68_02561 SM00935 Outer membrane protein (OmpH-like) A6F68_02563 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F68_02569 SM00849 Metallo-beta-lactamase superfamily A6F68_02586 SM00829 Enoylreductase A6F68_02602 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F68_02602 SM00866 A6F68_02602 A6F68_02618 SM00829 Enoylreductase A6F68_02640 SM00564 beta-propeller repeat A6F68_02643 SM00822 A6F68_02643 A6F68_02651 SM00387 Histidine kinase-like ATPases A6F68_02651 SM00388 His Kinase A (phosphoacceptor) domain A6F68_02652 SM00448 cheY-homologous receiver domain A6F68_02652 SM00862 Transcriptional regulatory protein, C terminal A6F68_02663 SM00967 RNA 2'-O ribose methyltransferase substrate binding A6F68_02665 SM00411 bacterial (prokaryotic) histone like domain A6F68_02666 SM00382 ATPases associated with a variety of cellular activities A6F68_02666 SM00464 Found in ATP-dependent protease La (LON) A6F68_02667 SM00972 Spore Coat Protein U domain A6F68_02669 SM00382 ATPases associated with a variety of cellular activities A6F68_02671 SM00487 DEAD-like helicases superfamily A6F68_02671 SM00490 helicase superfamily c-terminal domain A6F68_02671 SM00847 Helicase associated domain (HA2) Add an annotation A6F68_02673 SM00830 Chorismate mutase type II A6F68_02674 SM00387 Histidine kinase-like ATPases A6F68_02675 SM00448 cheY-homologous receiver domain A6F68_02675 SM00862 Transcriptional regulatory protein, C terminal A6F68_02678 SM00382 ATPases associated with a variety of cellular activities A6F68_02682 SM00530 Helix-turn-helix XRE-family like proteins A6F68_02686 SM01323 A6F68_02686 A6F68_02690 SM00344 helix_turn_helix ASNC type A6F68_02691 SM00354 helix_turn _helix lactose operon repressor A6F68_02697 SM00878 Biotin carboxylase C-terminal domain A6F68_02699 SM00357 Cold shock protein domain A6F68_02701 SM00344 helix_turn_helix ASNC type A6F68_02702 SM00388 His Kinase A (phosphoacceptor) domain A6F68_02706 SM00235 Zinc-dependent metalloprotease A6F68_02707 SM00382 ATPases associated with a variety of cellular activities A6F68_02716 SM00849 Metallo-beta-lactamase superfamily A6F68_02721 SM00421 helix_turn_helix, Lux Regulon A6F68_02726 SM00487 DEAD-like helicases superfamily A6F68_02726 SM00490 helicase superfamily c-terminal domain A6F68_02727 SM00382 ATPases associated with a variety of cellular activities A6F68_02735 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F68_02738 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F68_02738 SM00091 PAS domain A6F68_02738 SM00387 Histidine kinase-like ATPases A6F68_02738 SM00388 His Kinase A (phosphoacceptor) domain A6F68_02738 SM00448 cheY-homologous receiver domain A6F68_02739 SM00491 A6F68_02739 A6F68_02741 SM00422 helix_turn_helix, mercury resistance A6F68_02748 SM00564 beta-propeller repeat A6F68_02780 SM00448 cheY-homologous receiver domain A6F68_02781 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F68_02781 SM00387 Histidine kinase-like ATPases A6F68_02781 SM00388 His Kinase A (phosphoacceptor) domain A6F68_02781 SM00448 cheY-homologous receiver domain A6F68_02788 SM00878 Biotin carboxylase C-terminal domain A6F68_02799 SM00421 helix_turn_helix, Lux Regulon A6F68_02799 SM00448 cheY-homologous receiver domain A6F68_02818 SM00836 DALR anticodon binding domain A6F68_02818 SM01016 Arginyl tRNA synthetase N terminal dom A6F68_02827 SM00858 A6F68_02827 A6F68_02833 SM00347 helix_turn_helix multiple antibiotic resistance protein A6F68_02842 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F68_02843 SM00382 ATPases associated with a variety of cellular activities A6F68_02843 SM01086 C-terminal, D2-small domain, of ClpB protein A6F68_02850 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6F68_02850 SM00465 GIY-YIG type nucleases (URI domain) A6F68_02856 SM00316 Ribosomal protein S1-like RNA-binding domain A6F68_02856 SM00652 eukaryotic translation initiation factor 1A A6F68_02867 SM01211 A6F68_02867 A6F68_02868 SM00052 Putative diguanylate phosphodiesterase A6F68_02868 SM00267 diguanylate cyclase A6F68_02887 SM01018 B12 binding domain A6F68_02890 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A6F68_02891 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain A6F68_02891 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F68_02891 SM00091 PAS domain A6F68_02892 SM00382 ATPases associated with a variety of cellular activities A6F68_02893 SM00382 ATPases associated with a variety of cellular activities A6F68_02904 SM00354 helix_turn _helix lactose operon repressor A6F68_02908 SM00849 Metallo-beta-lactamase superfamily A6F68_02909 SM00331 Sigma factor PP2C-like phosphatases A6F68_02909 SM01080 A6F68_02909 A6F68_02914 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A6F68_02917 SM00382 ATPases associated with a variety of cellular activities A6F68_02926 SM00382 ATPases associated with a variety of cellular activities A6F68_02927 SM00342 helix_turn_helix, arabinose operon control protein A6F68_02931 SM00382 ATPases associated with a variety of cellular activities A6F68_02931 SM01086 C-terminal, D2-small domain, of ClpB protein A6F68_02938 SM00899 A6F68_02938 A6F68_02940 SM00248 ankyrin repeats A6F68_02952 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A6F68_02952 SM01232 A6F68_02952