AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 PIRSF PIRSF000709 2 110 2.0E-4 T 11-10-2018 AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 PIRSF PIRSF000709 164 217 18.0 T 11-10-2018 AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 229 42.624 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 142 217 1.7E-4 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 130 2.2E-25 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 SUPERFAMILY SSF53254 1 217 3.47E-68 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 Gene3D G3DSA:3.40.50.1240 2 231 1.6E-73 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 216 2.3E-98 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 AMC99_02652 99f7f3a32f784a16307fb639c801bd8b 232 SMART SM00855 3 186 3.0E-25 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMC99_00191 b4761af8e91b24b9e95d2dde83feb129 327 Gene3D G3DSA:1.10.287.470 104 195 1.2E-36 T 11-10-2018 AMC99_00191 b4761af8e91b24b9e95d2dde83feb129 327 Gene3D G3DSA:2.40.30.170 59 293 1.2E-36 T 11-10-2018 AMC99_00191 b4761af8e91b24b9e95d2dde83feb129 327 Gene3D G3DSA:2.40.50.100 70 233 1.2E-36 T 11-10-2018 AMC99_00191 b4761af8e91b24b9e95d2dde83feb129 327 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 275 3.5E-12 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMC99_00191 b4761af8e91b24b9e95d2dde83feb129 327 SUPERFAMILY SSF111369 70 249 2.75E-15 T 11-10-2018 AMC99_02363 4065fc1128891a6b52335a80c8f53469 319 Gene3D G3DSA:1.10.800.10 27 312 1.1E-93 T 11-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMC99_02363 4065fc1128891a6b52335a80c8f53469 319 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 47 268 4.1E-40 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMC99_02363 4065fc1128891a6b52335a80c8f53469 319 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 148 159 - T 11-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 AMC99_02363 4065fc1128891a6b52335a80c8f53469 319 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 48 280 3.7E-89 T 11-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 AMC99_02363 4065fc1128891a6b52335a80c8f53469 319 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 243 262 1.7E-8 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMC99_02363 4065fc1128891a6b52335a80c8f53469 319 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 105 127 1.7E-8 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMC99_02363 4065fc1128891a6b52335a80c8f53469 319 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 211 229 1.7E-8 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 AMC99_02363 4065fc1128891a6b52335a80c8f53469 319 SUPERFAMILY SSF56534 32 301 1.12E-93 T 11-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily AMC99_01455 3e1e7422fb4865b13d9c606cb5064db8 482 Pfam PF01565 FAD binding domain 44 180 3.4E-33 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMC99_01455 3e1e7422fb4865b13d9c606cb5064db8 482 Gene3D G3DSA:3.30.465.10 98 219 9.5E-40 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMC99_01455 3e1e7422fb4865b13d9c606cb5064db8 482 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 472 1.7E-48 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 AMC99_01455 3e1e7422fb4865b13d9c606cb5064db8 482 Gene3D G3DSA:3.30.43.10 3 96 3.7E-20 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMC99_01455 3e1e7422fb4865b13d9c606cb5064db8 482 SUPERFAMILY SSF55103 223 474 6.38E-54 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 AMC99_01455 3e1e7422fb4865b13d9c606cb5064db8 482 Gene3D G3DSA:3.30.70.2740 345 432 2.0E-26 T 11-10-2018 AMC99_01455 3e1e7422fb4865b13d9c606cb5064db8 482 Gene3D G3DSA:1.10.45.10 433 473 4.7E-17 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMC99_01455 3e1e7422fb4865b13d9c606cb5064db8 482 Gene3D G3DSA:3.30.70.2190 221 343 3.3E-31 T 11-10-2018 AMC99_01455 3e1e7422fb4865b13d9c606cb5064db8 482 SUPERFAMILY SSF56176 6 218 3.07E-64 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMC99_01031 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 Gene3D G3DSA:3.10.310.30 345 469 2.5E-29 T 11-10-2018 AMC99_01031 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 Gene3D G3DSA:3.90.1640.30 69 344 1.2E-84 T 11-10-2018 AMC99_01031 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 Pfam PF01368 DHH family 93 190 3.6E-10 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMC99_01031 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 40 589 6.4E-156 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AMC99_01031 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 Pfam PF02272 DHHA1 domain 341 464 1.9E-20 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AMC99_01031 c0d76a789ab74d66b3dbc7ba2f6d59a5 595 SUPERFAMILY SSF64182 68 468 1.03E-110 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AMC99_00808 5a2c2b7b793b982baf5f33738c2e166f 113 SUPERFAMILY SSF88874 27 95 4.32E-24 T 11-10-2018 AMC99_00808 5a2c2b7b793b982baf5f33738c2e166f 113 Gene3D G3DSA:3.90.1340.10 21 85 1.9E-14 T 11-10-2018 IPR037053 Phage tail collar domain superfamily AMC99_00808 5a2c2b7b793b982baf5f33738c2e166f 113 Pfam PF07484 Phage Tail Collar Domain 33 87 1.9E-23 T 11-10-2018 IPR011083 Phage tail collar domain AMC99_01532 a6dd2c565e1527c1f653f36364e6f343 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01532 a6dd2c565e1527c1f653f36364e6f343 131 SUPERFAMILY SSF56047 3 131 1.83E-43 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01532 a6dd2c565e1527c1f653f36364e6f343 131 Pfam PF00410 Ribosomal protein S8 5 131 1.3E-45 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01532 a6dd2c565e1527c1f653f36364e6f343 131 Gene3D G3DSA:3.30.1490.10 75 130 1.9E-24 T 11-10-2018 AMC99_01532 a6dd2c565e1527c1f653f36364e6f343 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 30.124 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01532 a6dd2c565e1527c1f653f36364e6f343 131 Gene3D G3DSA:3.30.1370.30 2 73 2.2E-24 T 11-10-2018 AMC99_00727 4e9557794b19f40a255a1fe0a71bb4bb 323 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 137 316 6.6E-47 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AMC99_00727 4e9557794b19f40a255a1fe0a71bb4bb 323 Gene3D G3DSA:1.10.8.1150 33 106 4.0E-13 T 11-10-2018 AMC99_00727 4e9557794b19f40a255a1fe0a71bb4bb 323 Pfam PF02618 YceG-like family 39 310 5.6E-74 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AMC99_00727 4e9557794b19f40a255a1fe0a71bb4bb 323 Gene3D G3DSA:3.30.160.60 286 321 2.4E-12 T 11-10-2018 AMC99_00727 4e9557794b19f40a255a1fe0a71bb4bb 323 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 8 317 30.2 T 11-10-2018 IPR003770 Endolytic murein transglycosylase AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 PIRSF PIRSF039144 21 132 4.6E-54 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 SMART SM00938 24 125 1.7E-67 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 Gene3D G3DSA:3.30.70.120 13 132 1.5E-47 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 SUPERFAMILY SSF54913 22 132 1.24E-44 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 PRINTS PR00340 P-II protein signature 103 123 6.2E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 PRINTS PR00340 P-II protein signature 22 37 6.2E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 PRINTS PR00340 P-II protein signature 72 95 6.2E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 PRINTS PR00340 P-II protein signature 43 61 6.2E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 ProSitePatterns PS00638 P-II protein C-terminal region signature. 103 116 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 Pfam PF00543 Nitrogen regulatory protein P-II 24 125 1.1E-42 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_01892 79b68c13a4bf80b8328d85cbd14a1789 132 ProSitePatterns PS00496 P-II protein uridylation site. 66 71 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 1.8E-29 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 Gene3D G3DSA:2.40.110.10 122 234 2.7E-42 T 11-10-2018 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 378 1.9E-47 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 PIRSF PIRSF016578 218 381 2.3E-15 T 11-10-2018 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 PIRSF PIRSF016578 2 193 3.2E-9 T 11-10-2018 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 Gene3D G3DSA:1.10.540.10 1 121 2.6E-37 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 Gene3D G3DSA:1.20.140.10 235 381 1.2E-54 T 11-10-2018 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 1.0E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 SUPERFAMILY SSF56645 4 242 2.88E-82 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 SUPERFAMILY SSF47203 228 380 1.93E-58 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00345 e3cf0be57e04f70459f8f97d041557be 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_01754 52c30ec801684508214725e0a5abdff7 382 Gene3D G3DSA:3.40.50.150 14 293 3.7E-68 T 11-10-2018 AMC99_01754 52c30ec801684508214725e0a5abdff7 382 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 91 111 2.7E-37 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_01754 52c30ec801684508214725e0a5abdff7 382 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 205 222 2.7E-37 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_01754 52c30ec801684508214725e0a5abdff7 382 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 42 56 2.7E-37 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_01754 52c30ec801684508214725e0a5abdff7 382 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 247 267 2.7E-37 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_01754 52c30ec801684508214725e0a5abdff7 382 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 224 242 2.7E-37 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 AMC99_01754 52c30ec801684508214725e0a5abdff7 382 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 46 52 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMC99_01754 52c30ec801684508214725e0a5abdff7 382 SUPERFAMILY SSF53335 21 274 8.17E-73 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01754 52c30ec801684508214725e0a5abdff7 382 Pfam PF01555 DNA methylase 43 263 9.9E-56 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AMC99_00445 2b4691ba7715139e7b768f5bc3433dc1 252 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 90 207 1.7E-11 T 11-10-2018 IPR008775 Phytanoyl-CoA dioxygenase AMC99_00445 2b4691ba7715139e7b768f5bc3433dc1 252 Gene3D G3DSA:2.60.120.620 7 251 4.6E-32 T 11-10-2018 AMC99_00445 2b4691ba7715139e7b768f5bc3433dc1 252 SUPERFAMILY SSF51197 16 226 3.43E-27 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 470 1.0E-164 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 8.1E-65 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 8.1E-65 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.1E-65 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 8.1E-65 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 8.1E-65 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 8.1E-65 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 8.1E-65 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.1E-65 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 8.1E-65 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMC99_01173 bcd54410a28016608511db8ce899645d 470 Gene3D G3DSA:3.50.50.60 5 329 1.8E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 3.8E-36 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 3.8E-36 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.8E-36 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 3.8E-36 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 3.8E-36 T 11-10-2018 AMC99_01173 bcd54410a28016608511db8ce899645d 470 SUPERFAMILY SSF51905 1 336 2.99E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01173 bcd54410a28016608511db8ce899645d 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 8.7E-66 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_01173 bcd54410a28016608511db8ce899645d 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 1.7E-36 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_01173 bcd54410a28016608511db8ce899645d 470 Gene3D G3DSA:3.50.50.60 155 277 1.8E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01173 bcd54410a28016608511db8ce899645d 470 Gene3D G3DSA:3.30.390.30 350 470 6.1E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMC99_01173 bcd54410a28016608511db8ce899645d 470 SUPERFAMILY SSF55424 347 469 4.81E-39 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMC99_01173 bcd54410a28016608511db8ce899645d 470 PIRSF PIRSF000350 1 464 3.9E-77 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 Gene3D G3DSA:3.40.50.620 1 167 8.6E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 7.0E-32 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 7.0E-32 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 89 105 7.0E-32 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 116 138 7.0E-32 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 Pfam PF01467 Cytidylyltransferase-like 7 136 1.7E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 59 6.8E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 SUPERFAMILY SSF52374 4 159 1.74E-40 T 11-10-2018 AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 159 4.2E-57 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMC99_01058 c7bfb71c6d7a7dd46d2b0acd08dce4bf 170 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 162 34.172 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 Hamap MF_00303 Trigger factor [tig]. 1 426 20.786 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 TIGRFAM TIGR00115 tig: trigger factor 11 419 2.1E-128 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 Gene3D G3DSA:3.30.70.1050 1 116 8.9E-33 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 Gene3D G3DSA:1.10.3120.10 117 425 3.4E-87 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 SUPERFAMILY SSF54534 88 244 4.12E-32 T 11-10-2018 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 4.3E-37 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 Gene3D G3DSA:3.10.50.40 151 249 3.4E-87 T 11-10-2018 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 SUPERFAMILY SSF102735 1 131 2.75E-34 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 420 4.4E-35 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 240 3.8E-15 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMC99_02005 d0e6fb2ecf44a3bee675b459f8550cec 523 SUPERFAMILY SSF109998 251 436 2.85E-43 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMC99_00866 749ad29a0d599bc2da3e87a5b16a2ee8 144 SUPERFAMILY SSF102400 1 123 2.75E-22 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AMC99_00866 749ad29a0d599bc2da3e87a5b16a2ee8 144 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 122 4.3E-17 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 AMC99_00866 749ad29a0d599bc2da3e87a5b16a2ee8 144 Gene3D G3DSA:3.40.50.10110 1 128 2.6E-10 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily AMC99_01313 891c922d21d11aeefa292959a09db47a 549 SUPERFAMILY SSF51905 3 446 4.6E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01313 891c922d21d11aeefa292959a09db47a 549 Gene3D G3DSA:3.50.50.60 9 383 2.9E-182 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01313 891c922d21d11aeefa292959a09db47a 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 444 546 1.1E-48 T 11-10-2018 AMC99_01313 891c922d21d11aeefa292959a09db47a 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 2.7E-6 T 11-10-2018 AMC99_01313 891c922d21d11aeefa292959a09db47a 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 176 191 2.7E-6 T 11-10-2018 AMC99_01313 891c922d21d11aeefa292959a09db47a 549 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 54 9.9E-8 T 11-10-2018 AMC99_01313 891c922d21d11aeefa292959a09db47a 549 SUPERFAMILY SSF54862 448 549 6.58E-28 T 11-10-2018 AMC99_01313 891c922d21d11aeefa292959a09db47a 549 SUPERFAMILY SSF54373 209 305 3.45E-35 T 11-10-2018 AMC99_01313 891c922d21d11aeefa292959a09db47a 549 Gene3D G3DSA:3.30.70.20 449 544 3.0E-38 T 11-10-2018 AMC99_01313 891c922d21d11aeefa292959a09db47a 549 Gene3D G3DSA:3.30.9.90 77 448 2.9E-182 T 11-10-2018 AMC99_01390 d18479dcf7cd156d85bc5fa9ce2dc448 120 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 2.0E-24 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01390 d18479dcf7cd156d85bc5fa9ce2dc448 120 SUPERFAMILY SSF54995 1 104 8.11E-34 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01390 d18479dcf7cd156d85bc5fa9ce2dc448 120 Pfam PF01250 Ribosomal protein S6 4 92 1.6E-27 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01390 d18479dcf7cd156d85bc5fa9ce2dc448 120 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.077 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_01390 d18479dcf7cd156d85bc5fa9ce2dc448 120 Gene3D G3DSA:3.30.70.60 1 100 6.3E-29 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMC99_01725 3f9e48b3ce227692b90791ade9552d32 225 Gene3D G3DSA:3.40.50.880 1 222 4.3E-69 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01725 3f9e48b3ce227692b90791ade9552d32 225 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 4 220 9.1E-87 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01725 3f9e48b3ce227692b90791ade9552d32 225 PIRSF PIRSF001586 1 225 2.2E-84 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01725 3f9e48b3ce227692b90791ade9552d32 225 SUPERFAMILY SSF52317 3 221 3.7E-75 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01725 3f9e48b3ce227692b90791ade9552d32 225 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 3 220 42.249 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01725 3f9e48b3ce227692b90791ade9552d32 225 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 4 206 3.2E-39 T 11-10-2018 AMC99_01725 3f9e48b3ce227692b90791ade9552d32 225 SMART SM01211 2 222 1.5E-127 T 11-10-2018 AMC99_02617 4cea1fe34dc449688ddee61478266f4f 720 Pfam PF13614 AAA domain 530 677 1.3E-10 T 11-10-2018 IPR025669 AAA domain AMC99_02617 4cea1fe34dc449688ddee61478266f4f 720 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 499 705 1.8E-40 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AMC99_02617 4cea1fe34dc449688ddee61478266f4f 720 Pfam PF13807 G-rich domain on putative tyrosine kinase 381 453 6.2E-12 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain AMC99_02617 4cea1fe34dc449688ddee61478266f4f 720 Gene3D G3DSA:3.40.50.300 445 713 1.1E-67 T 11-10-2018 AMC99_02617 4cea1fe34dc449688ddee61478266f4f 720 SUPERFAMILY SSF52540 518 699 3.72E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02343 214f114bf04e2ae7df066e067625380a 608 Gene3D G3DSA:3.60.120.10 6 394 4.4E-111 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 SUPERFAMILY SSF56322 50 392 1.83E-100 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 Gene3D G3DSA:3.20.10.10 481 606 2.6E-29 T 11-10-2018 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 Gene3D G3DSA:3.30.470.10 395 476 9.6E-21 T 11-10-2018 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 SUPERFAMILY SSF56752 340 599 4.45E-35 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 ProSitePatterns PS00770 Aminotransferases class-IV signature. 539 569 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 57 389 1.6E-112 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 Pfam PF00425 chorismate binding enzyme 133 389 9.4E-82 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMC99_02343 214f114bf04e2ae7df066e067625380a 608 Pfam PF01063 Amino-transferase class IV 407 602 1.1E-26 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 PRINTS PR00095 Anthranilate synthase component I signature 246 259 3.7E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 PRINTS PR00095 Anthranilate synthase component I signature 326 340 3.7E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 PRINTS PR00095 Anthranilate synthase component I signature 232 245 3.7E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_02343 214f114bf04e2ae7df066e067625380a 608 PRINTS PR00095 Anthranilate synthase component I signature 341 355 3.7E-12 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_02435 16075260e47ced48a41a9291d7dca62b 459 SUPERFAMILY SSF51338 49 436 5.28E-22 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_02435 16075260e47ced48a41a9291d7dca62b 459 Gene3D G3DSA:3.20.20.140 111 397 2.9E-101 T 11-10-2018 AMC99_02435 16075260e47ced48a41a9291d7dca62b 459 SUPERFAMILY SSF51556 110 401 5.44E-26 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_02435 16075260e47ced48a41a9291d7dca62b 459 Gene3D G3DSA:2.30.40.10 63 431 2.9E-101 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_02435 16075260e47ced48a41a9291d7dca62b 459 Pfam PF01979 Amidohydrolase family 265 431 8.8E-12 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 55 66 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 Pfam PF07478 D-ala D-ala ligase C-terminus 123 296 2.9E-37 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 SUPERFAMILY SSF56059 88 296 3.37E-45 T 11-10-2018 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 Pfam PF01820 D-ala D-ala ligase N-terminus 1 76 4.6E-16 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 Gene3D G3DSA:3.30.470.20 160 307 5.4E-44 T 11-10-2018 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 Gene3D G3DSA:3.30.1490.20 112 152 5.4E-6 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 300 28.992 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 239 270 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 PIRSF PIRSF039102 1 46 3.1E-5 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 PIRSF PIRSF039102 37 307 1.2E-64 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 SUPERFAMILY SSF52440 1 88 1.73E-26 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMC99_01861 ecad6f5dc9548b3fcd577964bfc72f6f 315 Gene3D G3DSA:3.40.50.20 1 94 4.9E-29 T 11-10-2018 AMC99_00172 5d58fba143bdc74ee3e8d2c1f620a74a 331 Pfam PF01757 Acyltransferase family 7 309 1.4E-23 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMC99_00100 3210731a443f3a2a4174784660884800 757 SUPERFAMILY SSF56784 436 744 1.48E-58 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00943 Copper-transporting ATPase signature 147 166 1.1E-15 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00943 Copper-transporting ATPase signature 205 224 1.1E-15 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00943 Copper-transporting ATPase signature 359 373 1.1E-15 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00943 Copper-transporting ATPase signature 614 631 1.1E-15 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00943 Copper-transporting ATPase signature 421 436 1.1E-15 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00943 Copper-transporting ATPase signature 225 243 1.1E-15 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 163 746 1.3E-191 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMC99_00100 3210731a443f3a2a4174784660884800 757 Gene3D G3DSA:1.10.620.20 2 50 1.4E-5 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AMC99_00100 3210731a443f3a2a4174784660884800 757 Gene3D G3DSA:2.70.150.20 229 341 1.1E-40 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 440 446 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMC99_00100 3210731a443f3a2a4174784660884800 757 Pfam PF00122 E1-E2 ATPase 236 418 5.8E-54 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 594 1.1E-27 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 637 656 1.1E-27 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 562 573 1.1E-27 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 452 1.1E-27 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 672 1.1E-27 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 286 300 1.1E-27 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 Pfam PF00702 haloacid dehalogenase-like hydrolase 434 651 3.5E-45 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 144 747 1.5E-180 T 11-10-2018 AMC99_00100 3210731a443f3a2a4174784660884800 757 SUPERFAMILY SSF47240 4 33 7.03E-5 T 11-10-2018 IPR009078 Ferritin-like superfamily AMC99_00100 3210731a443f3a2a4174784660884800 757 Pfam PF04945 YHS domain 4 34 3.0E-8 T 11-10-2018 IPR007029 YHS domain AMC99_00100 3210731a443f3a2a4174784660884800 757 Gene3D G3DSA:3.40.50.1000 419 689 9.8E-93 T 11-10-2018 IPR023214 HAD superfamily AMC99_00100 3210731a443f3a2a4174784660884800 757 SUPERFAMILY SSF81665 172 725 3.27E-18 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMC99_00100 3210731a443f3a2a4174784660884800 757 Gene3D G3DSA:3.40.1110.10 449 569 9.8E-93 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMC99_00100 3210731a443f3a2a4174784660884800 757 SUPERFAMILY SSF81653 240 336 8.89E-25 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMC99_00100 3210731a443f3a2a4174784660884800 757 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 207 717 9.2E-89 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 Pfam PF03952 Enolase, N-terminal domain 4 134 2.7E-59 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 SMART SM01192 139 425 2.0E-225 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 SMART SM01193 4 134 2.8E-96 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 Gene3D G3DSA:3.20.20.120 129 427 5.0E-130 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 SUPERFAMILY SSF54826 3 138 3.01E-57 T 11-10-2018 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 Hamap MF_00318 Enolase [eno]. 2 411 44.917 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 424 1.1E-208 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 422 1.7E-133 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 Gene3D G3DSA:3.30.390.10 1 127 4.9E-56 T 11-10-2018 IPR029017 Enolase-like, N-terminal AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 SUPERFAMILY SSF51604 139 423 1.16E-127 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 ProSitePatterns PS00164 Enolase signature. 334 347 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 PIRSF PIRSF001400 1 425 6.9E-189 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 161 174 7.5E-49 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 107 123 7.5E-49 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 37 51 7.5E-49 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 334 348 7.5E-49 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 311 322 7.5E-49 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01088 b7a28eafcd4511f39ebd673fb1e0c06a 428 PRINTS PR00148 Enolase signature 363 380 7.5E-49 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMC99_01655 866df5858a904092bcc87d9dde77949b 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 106 192 4.7E-7 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMC99_01655 866df5858a904092bcc87d9dde77949b 210 SUPERFAMILY SSF52833 1 84 7.04E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01655 866df5858a904092bcc87d9dde77949b 210 SUPERFAMILY SSF47616 87 207 3.34E-22 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_01655 866df5858a904092bcc87d9dde77949b 210 Gene3D G3DSA:1.20.1050.10 84 198 1.8E-20 T 11-10-2018 AMC99_01655 866df5858a904092bcc87d9dde77949b 210 Gene3D G3DSA:3.40.30.10 1 82 1.2E-30 T 11-10-2018 AMC99_01655 866df5858a904092bcc87d9dde77949b 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 12 80 2.0E-10 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_00141 2a31dab63dd0d992512b0dae1825f099 204 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 2 204 34.952 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_00141 2a31dab63dd0d992512b0dae1825f099 204 PIRSF PIRSF000190 2 204 2.4E-72 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_00141 2a31dab63dd0d992512b0dae1825f099 204 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 163 204 3.5E-14 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_00141 2a31dab63dd0d992512b0dae1825f099 204 SUPERFAMILY SSF50475 13 204 3.93E-61 T 11-10-2018 AMC99_00141 2a31dab63dd0d992512b0dae1825f099 204 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 14 202 4.9E-70 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_00141 2a31dab63dd0d992512b0dae1825f099 204 Gene3D G3DSA:2.30.110.10 1 204 1.8E-71 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMC99_00141 2a31dab63dd0d992512b0dae1825f099 204 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 31 110 1.1E-21 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_02340 45b68e90a9d0bb36b4541dcd1f4e09a3 251 SUPERFAMILY SSF52172 4 129 5.83E-40 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02340 45b68e90a9d0bb36b4541dcd1f4e09a3 251 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 238 3.3E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_02340 45b68e90a9d0bb36b4541dcd1f4e09a3 251 Pfam PF00072 Response regulator receiver domain 9 118 2.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02340 45b68e90a9d0bb36b4541dcd1f4e09a3 251 Gene3D G3DSA:1.10.10.10 133 243 6.2E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02340 45b68e90a9d0bb36b4541dcd1f4e09a3 251 SUPERFAMILY SSF46894 143 240 1.45E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_02340 45b68e90a9d0bb36b4541dcd1f4e09a3 251 Gene3D G3DSA:3.40.50.2300 2 132 2.2E-34 T 11-10-2018 AMC99_02340 45b68e90a9d0bb36b4541dcd1f4e09a3 251 SMART SM00448 7 117 2.5E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02340 45b68e90a9d0bb36b4541dcd1f4e09a3 251 SMART SM00862 162 238 7.2E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00610 f606658f38bdbe284476b65a56b0bd57 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 393 2.2E-142 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_00610 f606658f38bdbe284476b65a56b0bd57 402 PIRSF PIRSF001434 1 397 2.3E-146 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_00610 f606658f38bdbe284476b65a56b0bd57 402 Gene3D G3DSA:3.90.1150.10 262 400 6.7E-55 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_00610 f606658f38bdbe284476b65a56b0bd57 402 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 8 394 2.5E-188 T 11-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 AMC99_00610 f606658f38bdbe284476b65a56b0bd57 402 SUPERFAMILY SSF53383 28 394 2.45E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_00610 f606658f38bdbe284476b65a56b0bd57 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_00610 f606658f38bdbe284476b65a56b0bd57 402 Gene3D G3DSA:3.40.640.10 9 261 1.5E-95 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_00757 8da89e110ce6ce8cc18bd09062d01b68 422 Gene3D G3DSA:1.20.1600.10 8 422 3.3E-73 T 11-10-2018 AMC99_00757 8da89e110ce6ce8cc18bd09062d01b68 422 SUPERFAMILY SSF56954 2 419 5.49E-78 T 11-10-2018 AMC99_00757 8da89e110ce6ce8cc18bd09062d01b68 422 Pfam PF02321 Outer membrane efflux protein 25 214 3.0E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_00757 8da89e110ce6ce8cc18bd09062d01b68 422 Pfam PF02321 Outer membrane efflux protein 234 417 1.9E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_01285 16221f0bcb94223c8fc7c8427377759d 260 Gene3D G3DSA:3.10.20.30 18 128 1.0E-45 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_01285 16221f0bcb94223c8fc7c8427377759d 260 SUPERFAMILY SSF46548 130 258 1.92E-39 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_01285 16221f0bcb94223c8fc7c8427377759d 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMC99_01285 16221f0bcb94223c8fc7c8427377759d 260 Gene3D G3DSA:1.10.1060.10 129 260 6.3E-59 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_01285 16221f0bcb94223c8fc7c8427377759d 260 SUPERFAMILY SSF54292 26 128 4.16E-32 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMC99_01285 16221f0bcb94223c8fc7c8427377759d 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 133 1.6E-34 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01285 16221f0bcb94223c8fc7c8427377759d 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_01285 16221f0bcb94223c8fc7c8427377759d 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 1.0E-85 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01285 16221f0bcb94223c8fc7c8427377759d 260 Pfam PF13534 4Fe-4S dicluster domain 170 242 1.9E-9 T 11-10-2018 AMC99_01989 275948add7fc84cfbfeb81bfe3dd0c55 199 Gene3D G3DSA:3.30.565.10 56 189 7.0E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01989 275948add7fc84cfbfeb81bfe3dd0c55 199 Pfam PF10090 Histidine phosphotransferase C-terminal domain 62 183 6.5E-31 T 11-10-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal AMC99_01989 275948add7fc84cfbfeb81bfe3dd0c55 199 Gene3D G3DSA:1.10.287.130 1 54 3.7E-16 T 11-10-2018 AMC99_00312 d621ad3c1ae5476e63769d6105bb8a59 248 SMART SM00419 179 227 9.7E-8 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00312 d621ad3c1ae5476e63769d6105bb8a59 248 SMART SM00100 20 141 1.7E-4 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_00312 d621ad3c1ae5476e63769d6105bb8a59 248 Gene3D G3DSA:1.10.10.10 155 238 1.8E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00312 d621ad3c1ae5476e63769d6105bb8a59 248 Pfam PF00027 Cyclic nucleotide-binding domain 42 125 1.7E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_00312 d621ad3c1ae5476e63769d6105bb8a59 248 Gene3D G3DSA:2.60.120.10 37 154 8.2E-29 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_00312 d621ad3c1ae5476e63769d6105bb8a59 248 Pfam PF13545 Crp-like helix-turn-helix domain 163 230 1.5E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00312 d621ad3c1ae5476e63769d6105bb8a59 248 SUPERFAMILY SSF46785 156 234 1.91E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00312 d621ad3c1ae5476e63769d6105bb8a59 248 SUPERFAMILY SSF51206 13 153 2.36E-26 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMC99_01593 19f2824cb09593f7338363245e45d227 770 PIRSF PIRSF006630 98 759 1.1E-151 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMC99_01593 19f2824cb09593f7338363245e45d227 770 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 101 758 27.715 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMC99_01593 19f2824cb09593f7338363245e45d227 770 Gene3D G3DSA:3.40.50.620 413 633 1.3E-61 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01593 19f2824cb09593f7338363245e45d227 770 Gene3D G3DSA:1.10.10.1140 648 769 3.1E-49 T 11-10-2018 AMC99_01593 19f2824cb09593f7338363245e45d227 770 Pfam PF00795 Carbon-nitrogen hydrolase 102 369 5.1E-13 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMC99_01593 19f2824cb09593f7338363245e45d227 770 Gene3D G3DSA:3.60.110.10 90 412 1.3E-86 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_01593 19f2824cb09593f7338363245e45d227 770 Pfam PF02540 NAD synthase 437 609 3.8E-21 T 11-10-2018 IPR022310 NAD/GMP synthase AMC99_01593 19f2824cb09593f7338363245e45d227 770 SUPERFAMILY SSF56317 100 381 3.01E-48 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_01593 19f2824cb09593f7338363245e45d227 770 SUPERFAMILY SSF52402 414 737 2.51E-62 T 11-10-2018 AMC99_00695 55f31ecb7b93763c56c43d88f55a9890 74 Gene3D G3DSA:2.30.170.50 1 72 8.3E-21 T 11-10-2018 AMC99_00695 55f31ecb7b93763c56c43d88f55a9890 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 59 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00695 55f31ecb7b93763c56c43d88f55a9890 74 SUPERFAMILY SSF143800 1 70 7.85E-21 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00695 55f31ecb7b93763c56c43d88f55a9890 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 69 5.1E-30 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00695 55f31ecb7b93763c56c43d88f55a9890 74 Pfam PF01197 Ribosomal protein L31 1 68 2.6E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00695 55f31ecb7b93763c56c43d88f55a9890 74 PRINTS PR01249 Ribosomal protein L31 signature 49 67 3.5E-9 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00695 55f31ecb7b93763c56c43d88f55a9890 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.5E-9 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00695 55f31ecb7b93763c56c43d88f55a9890 74 PRINTS PR01249 Ribosomal protein L31 signature 34 49 3.5E-9 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PIRSF PIRSF000350 1 466 4.1E-89 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 Gene3D G3DSA:3.50.50.60 146 271 1.4E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 SUPERFAMILY SSF51905 3 367 2.31E-68 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 470 1.1E-162 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 SUPERFAMILY SSF55424 344 469 9.62E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 Gene3D G3DSA:3.50.50.60 7 329 1.4E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.5E-74 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.5E-74 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 2.5E-74 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 2.5E-74 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 2.5E-74 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.5E-74 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.5E-74 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 2.5E-74 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.5E-74 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 328 1.5E-78 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 460 2.4E-33 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.8E-42 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 1.8E-42 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 1.8E-42 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.8E-42 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 1.8E-42 T 11-10-2018 AMC99_01509 8dadd9fcb48bf352b0f51d62286c3363 470 Gene3D G3DSA:3.30.390.30 346 470 3.3E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMC99_01988 44abcfd3629bc43b0f080186d7f13d3a 235 SUPERFAMILY SSF47090 178 226 3.53E-10 T 11-10-2018 IPR036365 PGBD-like superfamily AMC99_01988 44abcfd3629bc43b0f080186d7f13d3a 235 SUPERFAMILY SSF55846 9 159 1.83E-52 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMC99_01988 44abcfd3629bc43b0f080186d7f13d3a 235 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 20 147 6.6E-28 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMC99_01988 44abcfd3629bc43b0f080186d7f13d3a 235 Gene3D G3DSA:1.10.101.10 168 229 2.4E-6 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMC99_01988 44abcfd3629bc43b0f080186d7f13d3a 235 Gene3D G3DSA:3.40.80.10 4 159 2.4E-48 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMC99_01988 44abcfd3629bc43b0f080186d7f13d3a 235 SMART SM00644 12 147 1.7E-34 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 AMC99_00902 bcb8f43df9d33a270a036c23a7a0e571 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 286 4.8E-65 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMC99_00902 bcb8f43df9d33a270a036c23a7a0e571 370 Pfam PF02481 DNA recombination-mediator protein A 75 278 4.0E-72 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMC99_00902 bcb8f43df9d33a270a036c23a7a0e571 370 Gene3D G3DSA:1.10.10.10 301 369 1.0E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00902 bcb8f43df9d33a270a036c23a7a0e571 370 SUPERFAMILY SSF102405 84 287 7.78E-42 T 11-10-2018 AMC99_00902 bcb8f43df9d33a270a036c23a7a0e571 370 Gene3D G3DSA:3.40.50.450 1 289 1.5E-99 T 11-10-2018 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 243 259 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 Gene3D G3DSA:3.30.70.1660 128 356 3.4E-96 T 11-10-2018 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 SMART SM00937 83 193 2.0E-51 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 364 39.18 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 Pfam PF03462 PCRF domain 30 218 1.6E-57 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 Pfam PF00472 RF-1 domain 226 336 2.9E-41 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 Gene3D G3DSA:3.30.160.20 224 319 3.4E-96 T 11-10-2018 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 362 1.1E-150 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 Gene3D G3DSA:1.20.58.410 3 113 3.8E-23 T 11-10-2018 AMC99_01273 0922827cc4911f7063ad64b83dc58aff 375 SUPERFAMILY SSF75620 30 364 5.36E-129 T 11-10-2018 AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 SUPERFAMILY SSF51419 34 293 8.43E-63 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 44 291 9.3E-36 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 TIGRFAM TIGR03099 dCO2ase_PEP1: pyridoxal-dependent decarboxylase, exosortase A system-associated 12 408 5.9E-178 T 11-10-2018 IPR017530 Pyridoxal-dependent decarboxylase, exosortase system type 1 associated AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 292 386 8.8E-14 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 Gene3D G3DSA:2.40.37.10 30 408 4.9E-93 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 Gene3D G3DSA:3.20.20.10 42 293 4.9E-93 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 SUPERFAMILY SSF50621 273 408 2.72E-31 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 229 246 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 82 3.4E-10 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 194 207 3.4E-10 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 281 300 3.4E-10 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_01301 5066dd59f90e598cdeea99e828fb772c 408 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 84 96 3.4E-10 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_00544 3d187156ce68c4e6d1d0be8ed9b1cf65 162 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 7 122 3.7E-43 T 11-10-2018 IPR028973 PhnB-like AMC99_00544 3d187156ce68c4e6d1d0be8ed9b1cf65 162 Gene3D G3DSA:3.10.180.70 3 162 2.1E-58 T 11-10-2018 AMC99_00544 3d187156ce68c4e6d1d0be8ed9b1cf65 162 SUPERFAMILY SSF54593 7 159 3.04E-46 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00544 3d187156ce68c4e6d1d0be8ed9b1cf65 162 PIRSF PIRSF021700 3 161 6.7E-61 T 11-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase AMC99_00215 40465e4ee7633871a70b342f753d4508 400 SMART SM00093 37 389 6.4E-48 T 11-10-2018 IPR023796 Serpin domain AMC99_00215 40465e4ee7633871a70b342f753d4508 400 SUPERFAMILY SSF56574 34 389 3.01E-75 T 11-10-2018 IPR036186 Serpin superfamily AMC99_00215 40465e4ee7633871a70b342f753d4508 400 ProSitePatterns PS00284 Serpins signature. 362 372 - T 11-10-2018 IPR023795 Serpin, conserved site AMC99_00215 40465e4ee7633871a70b342f753d4508 400 Pfam PF00079 Serpin (serine protease inhibitor) 36 389 1.5E-69 T 11-10-2018 IPR023796 Serpin domain AMC99_00215 40465e4ee7633871a70b342f753d4508 400 Gene3D G3DSA:3.30.497.10 46 355 2.1E-77 T 11-10-2018 AMC99_00215 40465e4ee7633871a70b342f753d4508 400 Gene3D G3DSA:2.30.39.10 186 385 2.1E-77 T 11-10-2018 AMC99_01486 c18940f00340a2467c2758ef39cce138 411 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 15 23 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMC99_01486 c18940f00340a2467c2758ef39cce138 411 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 125 136 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMC99_01486 c18940f00340a2467c2758ef39cce138 411 Hamap MF_00005 Argininosuccinate synthase [argG]. 9 409 51.971 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMC99_01486 c18940f00340a2467c2758ef39cce138 411 TIGRFAM TIGR00032 argG: argininosuccinate synthase 11 406 6.1E-140 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMC99_01486 c18940f00340a2467c2758ef39cce138 411 SUPERFAMILY SSF52402 10 179 4.85E-45 T 11-10-2018 AMC99_01486 c18940f00340a2467c2758ef39cce138 411 Gene3D G3DSA:3.90.1260.10 185 411 1.8E-95 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMC99_01486 c18940f00340a2467c2758ef39cce138 411 SUPERFAMILY SSF69864 182 408 9.94E-90 T 11-10-2018 AMC99_01486 c18940f00340a2467c2758ef39cce138 411 Gene3D G3DSA:3.40.50.620 10 181 2.2E-66 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01486 c18940f00340a2467c2758ef39cce138 411 Pfam PF00764 Arginosuccinate synthase 13 403 2.1E-149 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Gene3D G3DSA:3.40.50.10490 41 477 1.7E-152 T 11-10-2018 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Gene3D G3DSA:3.40.50.10490 100 279 1.7E-152 T 11-10-2018 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 SUPERFAMILY SSF53697 13 507 6.39E-144 T 11-10-2018 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 468 485 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Gene3D G3DSA:1.10.1390.10 478 510 5.7E-11 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 246 264 9.1E-39 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 454 468 9.1E-39 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 137 156 9.1E-39 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 468 481 9.1E-39 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 436 454 9.1E-39 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 PRINTS PR00662 Glucose-6-phosphate isomerase signature 323 344 9.1E-39 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 45 495 34.038 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 250 263 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00912 7f76ec40ebe6ccbcb0f1cd1b2d9a231d 513 Pfam PF00342 Phosphoglucose isomerase 51 505 6.6E-161 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF52540 5 337 9.87E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1089 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Pfam PF00270 DEAD/DEAH box helicase 613 774 1.1E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF52540 790 997 5.11E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Pfam PF00271 Helicase conserved C-terminal domain 812 917 1.3E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Gene3D G3DSA:3.40.50.300 550 789 1.5E-222 T 11-10-2018 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF141259 479 556 1.57E-20 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF52540 532 792 1.93E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SMART SM00982 1016 1116 2.2E-38 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Gene3D G3DSA:3.30.2060.10 128 214 2.3E-86 T 11-10-2018 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Pfam PF02559 CarD-like/TRCF domain 489 581 6.4E-26 T 11-10-2018 IPR003711 CarD-like/TRCF domain AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF52540 354 478 1.3E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Gene3D G3DSA:3.40.50.11180 37 309 2.3E-86 T 11-10-2018 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SMART SM00487 608 798 2.9E-35 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Gene3D G3DSA:3.40.50.300 487 996 1.5E-222 T 11-10-2018 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SMART SM01058 488 584 2.7E-42 T 11-10-2018 IPR003711 CarD-like/TRCF domain AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SMART SM00490 834 918 7.5E-19 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Gene3D G3DSA:2.30.30.840 492 549 1.5E-222 T 11-10-2018 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 SUPERFAMILY SSF143517 1005 1156 3.14E-39 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Pfam PF03461 TRCF domain 1018 1109 9.8E-24 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Gene3D G3DSA:3.90.1150.50 1012 1156 3.0E-33 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AMC99_00964 7e35891781818688f5620bb44fc52d24 1168 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 32 1123 26.916 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMC99_01985 ef37755cba0dcb5da18aa770a9992f5b 269 SUPERFAMILY SSF56300 24 252 9.5E-44 T 11-10-2018 AMC99_01985 ef37755cba0dcb5da18aa770a9992f5b 269 Pfam PF00149 Calcineurin-like phosphoesterase 28 214 8.9E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMC99_01985 ef37755cba0dcb5da18aa770a9992f5b 269 Gene3D G3DSA:3.60.21.10 21 266 1.2E-56 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMC99_01290 41620e04ef803b914dcefc8df41216eb 632 TIGRFAM TIGR03108 eps_aminotran_1: exosortase A system-associated amidotransferase 1 1 627 1.7E-290 T 11-10-2018 IPR017539 Exosortase 1 system-associated amidotransferase 1 AMC99_01290 41620e04ef803b914dcefc8df41216eb 632 Pfam PF13537 Glutamine amidotransferase domain 48 167 7.7E-48 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMC99_01290 41620e04ef803b914dcefc8df41216eb 632 SUPERFAMILY SSF56235 1 225 7.46E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_01290 41620e04ef803b914dcefc8df41216eb 632 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 561 3.4E-150 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMC99_01290 41620e04ef803b914dcefc8df41216eb 632 Gene3D G3DSA:3.60.20.10 2 185 5.0E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_01290 41620e04ef803b914dcefc8df41216eb 632 Pfam PF00733 Asparagine synthase 244 624 1.2E-97 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AMC99_01290 41620e04ef803b914dcefc8df41216eb 632 PIRSF PIRSF001589 1 630 4.9E-175 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 AMC99_01290 41620e04ef803b914dcefc8df41216eb 632 SUPERFAMILY SSF52402 233 620 3.2E-87 T 11-10-2018 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 Gene3D G3DSA:3.40.50.720 1 148 5.1E-47 T 11-10-2018 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 130 3.5E-37 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 374 2.0E-38 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 PIRSF PIRSF006205 2 384 9.4E-145 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 4.1E-40 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 SUPERFAMILY SSF55347 124 261 1.67E-59 T 11-10-2018 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 Gene3D G3DSA:1.10.1740.10 301 384 4.4E-28 T 11-10-2018 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 SUPERFAMILY SSF51735 3 148 1.02E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 380 44.129 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 377 2.0E-136 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMC99_00690 3e0b7590d5a47d38e2b9b09df7c20925 384 SUPERFAMILY SSF69055 290 382 1.16E-29 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AMC99_02542 58fd62cf539bd8b88bd327c112746d80 338 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 5 337 1.4E-115 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMC99_02542 58fd62cf539bd8b88bd327c112746d80 338 Gene3D G3DSA:3.20.20.210 3 338 3.0E-113 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMC99_02542 58fd62cf539bd8b88bd327c112746d80 338 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 1 338 42.966 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMC99_02542 58fd62cf539bd8b88bd327c112746d80 338 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 337 1.0E-106 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMC99_02542 58fd62cf539bd8b88bd327c112746d80 338 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 18 27 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AMC99_02542 58fd62cf539bd8b88bd327c112746d80 338 SUPERFAMILY SSF51726 5 337 2.27E-97 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 Gene3D G3DSA:3.30.1330.90 321 454 2.7E-34 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 SUPERFAMILY SSF55021 454 526 1.62E-16 T 11-10-2018 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 SUPERFAMILY SSF52283 3 137 2.27E-37 T 11-10-2018 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 Pfam PF01842 ACT domain 455 518 3.1E-7 T 11-10-2018 IPR002912 ACT domain AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 SUPERFAMILY SSF51735 99 284 3.63E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 SUPERFAMILY SSF143548 321 449 3.14E-34 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 5 525 1.9E-196 T 11-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 Gene3D G3DSA:3.40.50.720 7 305 2.1E-117 T 11-10-2018 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 283 1.4E-62 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 315 1.1E-35 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 Gene3D G3DSA:3.30.70.260 455 527 1.8E-19 T 11-10-2018 AMC99_01810 8bc83781ae26ec52346114cbda7a9cbe 528 Gene3D G3DSA:3.40.50.720 99 281 2.1E-117 T 11-10-2018 AMC99_02229 c7339995022a3ff671829b19582e930e 176 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 159 34.093 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_02229 c7339995022a3ff671829b19582e930e 176 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 148 8.9E-56 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_02229 c7339995022a3ff671829b19582e930e 176 SUPERFAMILY SSF55068 1 167 1.02E-67 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_02229 c7339995022a3ff671829b19582e930e 176 Gene3D G3DSA:3.30.1060.10 1 163 3.6E-65 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_02229 c7339995022a3ff671829b19582e930e 176 Pfam PF01625 Peptide methionine sulfoxide reductase 3 155 1.5E-58 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 Pfam PF02151 UvrB/uvrC motif 267 297 1.2E-7 T 11-10-2018 IPR001943 UVR domain GO:0005515 AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 SMART SM00278 659 678 4.1 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 SMART SM00278 627 646 0.91 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 Pfam PF01541 GIY-YIG catalytic domain 81 152 7.0E-7 T 11-10-2018 IPR000305 GIY-YIG endonuclease AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 Pfam PF14520 Helix-hairpin-helix domain 629 676 4.0E-7 T 11-10-2018 AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 SUPERFAMILY SSF46600 253 302 1.27E-11 T 11-10-2018 IPR036876 UVR domain superfamily AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 SUPERFAMILY SSF47781 592 680 2.83E-20 T 11-10-2018 IPR010994 RuvA domain 2-like AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 Gene3D G3DSA:3.40.1440.10 66 164 1.1E-29 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 71 659 3.2E-165 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 444 613 1.4E-49 T 11-10-2018 IPR001162 UvrC family homology region AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 Gene3D G3DSA:1.10.150.20 621 679 1.0E-19 T 11-10-2018 AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 SUPERFAMILY SSF82771 79 162 1.31E-17 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 SMART SM00465 79 160 4.5E-16 T 11-10-2018 IPR000305 GIY-YIG endonuclease AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 Gene3D G3DSA:3.30.420.340 436 620 1.7E-48 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily AMC99_00526 6b7f983fe977eb2c3157b61520b57c3b 683 Hamap MF_00203 UvrABC system protein C [uvrC]. 66 678 26.941 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AMC99_00348 617c67be438afd7ea107466d072909f7 100 Gene3D G3DSA:3.30.10.10 33 99 1.3E-17 T 11-10-2018 AMC99_00348 617c67be438afd7ea107466d072909f7 100 Pfam PF11720 Peptidase inhibitor I78 family 36 100 1.7E-11 T 11-10-2018 IPR021719 Proteinase inhibitor I78 AMC99_00653 0fcd2186737ca65dd26c5ee51bfff018 532 SUPERFAMILY SSF82866 328 525 5.1E-43 T 11-10-2018 AMC99_00653 0fcd2186737ca65dd26c5ee51bfff018 532 Pfam PF07549 SecD/SecF GG Motif 44 60 1.4E-4 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMC99_00653 0fcd2186737ca65dd26c5ee51bfff018 532 Gene3D G3DSA:3.30.1360.200 208 349 1.6E-60 T 11-10-2018 AMC99_00653 0fcd2186737ca65dd26c5ee51bfff018 532 Gene3D G3DSA:1.20.1640.10 355 526 3.3E-9 T 11-10-2018 AMC99_00653 0fcd2186737ca65dd26c5ee51bfff018 532 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 281 511 5.0E-74 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_00653 0fcd2186737ca65dd26c5ee51bfff018 532 Gene3D G3DSA:3.30.70.3400 150 354 1.6E-60 T 11-10-2018 AMC99_00653 0fcd2186737ca65dd26c5ee51bfff018 532 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 532 42.573 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMC99_00653 0fcd2186737ca65dd26c5ee51bfff018 532 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 516 1.8E-133 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMC99_00653 0fcd2186737ca65dd26c5ee51bfff018 532 Pfam PF02355 Protein export membrane protein 350 513 4.6E-19 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 Pfam PF12840 Helix-turn-helix domain 8 66 2.1E-14 T 11-10-2018 AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 SUPERFAMILY SSF53335 124 302 5.69E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 Gene3D G3DSA:3.40.50.150 116 301 2.2E-41 T 11-10-2018 AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 Gene3D G3DSA:1.10.10.10 2 108 1.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 SUPERFAMILY SSF46785 5 73 6.48E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 Pfam PF08241 Methyltransferase domain 164 260 2.4E-24 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 1.8E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 1.8E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 1.8E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 1.8E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00332 2e330a0c7b5bde507a3ba366dc3c9f2e 332 SMART SM00418 9 96 4.1E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_01727 513fabe445c0883341d890a934ec2da9 607 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 607 39.454 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMC99_01727 513fabe445c0883341d890a934ec2da9 607 Pfam PF13522 Glutamine amidotransferase domain 64 192 1.9E-23 T 11-10-2018 AMC99_01727 513fabe445c0883341d890a934ec2da9 607 Gene3D G3DSA:3.40.50.10490 246 606 1.3E-142 T 11-10-2018 AMC99_01727 513fabe445c0883341d890a934ec2da9 607 Pfam PF01380 SIS domain 287 413 9.5E-28 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMC99_01727 513fabe445c0883341d890a934ec2da9 607 Pfam PF01380 SIS domain 459 588 8.0E-26 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AMC99_01727 513fabe445c0883341d890a934ec2da9 607 Gene3D G3DSA:3.60.20.10 2 240 3.5E-75 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_01727 513fabe445c0883341d890a934ec2da9 607 Gene3D G3DSA:3.40.50.10490 444 592 1.3E-142 T 11-10-2018 AMC99_01727 513fabe445c0883341d890a934ec2da9 607 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 607 4.4E-244 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AMC99_01727 513fabe445c0883341d890a934ec2da9 607 SUPERFAMILY SSF56235 2 233 8.15E-73 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_01727 513fabe445c0883341d890a934ec2da9 607 SUPERFAMILY SSF53697 244 607 2.61E-113 T 11-10-2018 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 SUPERFAMILY SSF100934 506 604 2.09E-18 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:1.20.1270.10 523 606 3.9E-27 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:3.30.420.40 5 378 1.6E-162 T 11-10-2018 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 SUPERFAMILY SSF53067 186 381 1.23E-65 T 11-10-2018 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:3.90.640.10 224 315 1.6E-162 T 11-10-2018 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 138 158 5.3E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.3E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 197 207 5.3E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 387 406 5.3E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 364 384 5.3E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.3E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 333 349 5.3E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 468 484 5.3E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.3E-82 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.309 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 SUPERFAMILY SSF53067 4 184 1.17E-68 T 11-10-2018 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 Pfam PF00012 Hsp70 protein 4 603 2.0E-272 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:2.60.34.10 382 522 7.9E-66 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 SUPERFAMILY SSF100920 383 539 5.49E-63 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.1E-293 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AMC99_01158 5353315db9ee11c39cdb9fc39b846a00 640 Gene3D G3DSA:3.30.420.40 180 365 1.6E-162 T 11-10-2018 AMC99_00234 5e78b5c385a7d82c076ef7015fccf7ed 237 Gene3D G3DSA:3.30.1600.10 21 159 2.0E-74 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily AMC99_00234 5e78b5c385a7d82c076ef7015fccf7ed 237 Gene3D G3DSA:3.40.50.1220 7 229 2.0E-74 T 11-10-2018 AMC99_00234 5e78b5c385a7d82c076ef7015fccf7ed 237 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 5 237 55.41 T 11-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 AMC99_00234 5e78b5c385a7d82c076ef7015fccf7ed 237 SUPERFAMILY SSF52467 3 235 5.82E-76 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMC99_00234 5e78b5c385a7d82c076ef7015fccf7ed 237 Pfam PF02146 Sir2 family 12 187 9.2E-48 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 AMC99_01229 854e60785fbb111a647fc410aee1c150 261 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 260 36.561 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AMC99_01229 854e60785fbb111a647fc410aee1c150 261 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 54 72 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 AMC99_01229 854e60785fbb111a647fc410aee1c150 261 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 258 2.6E-94 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 AMC99_01229 854e60785fbb111a647fc410aee1c150 261 Gene3D G3DSA:3.20.20.70 1 261 1.6E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01229 854e60785fbb111a647fc410aee1c150 261 SUPERFAMILY SSF51366 10 260 6.47E-86 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:4.10.860.10 642 693 3.0E-7 T 11-10-2018 AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 SMART SM00490 491 577 1.9E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 Pfam PF04851 Type III restriction enzyme, res subunit 46 170 5.3E-12 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 SUPERFAMILY SSF52540 66 618 1.68E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:3.40.50.300 28 269 6.2E-76 T 11-10-2018 AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 SUPERFAMILY SSF46600 647 689 9.15E-11 T 11-10-2018 IPR036876 UVR domain superfamily AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:3.40.50.300 446 627 4.0E-51 T 11-10-2018 AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 Pfam PF00271 Helicase conserved C-terminal domain 464 575 9.9E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 SUPERFAMILY SSF52540 36 444 8.15E-126 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 35 687 1.1E-301 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 Pfam PF12344 Ultra-violet resistance protein B 583 624 5.2E-23 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 SMART SM00487 40 457 6.7E-25 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 Pfam PF02151 UvrB/uvrC motif 656 689 2.4E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 Gene3D G3DSA:3.40.50.300 307 445 3.3E-43 T 11-10-2018 AMC99_00822 6a352e467f54be946dc686dcd870d2ef 728 Hamap MF_00204 UvrABC system protein B [uvrB]. 34 690 41.277 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AMC99_02728 4e70037475deb0a71fb2cbd4c475df30 442 Pfam PF17289 Terminase RNaseH-like domain 281 427 1.1E-19 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like AMC99_02728 4e70037475deb0a71fb2cbd4c475df30 442 Pfam PF03237 Terminase-like family 56 264 2.3E-12 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type AMC99_02728 4e70037475deb0a71fb2cbd4c475df30 442 Gene3D G3DSA:3.40.50.300 3 200 3.9E-10 T 11-10-2018 AMC99_00842 eceb614ad44510820685ab7d99ae128f 230 SUPERFAMILY SSF52266 48 228 2.14E-47 T 11-10-2018 AMC99_00842 eceb614ad44510820685ab7d99ae128f 230 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 52 213 1.2E-29 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain AMC99_00842 eceb614ad44510820685ab7d99ae128f 230 Gene3D G3DSA:3.40.50.1110 49 230 5.2E-65 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AMC99_02721 a1fbd8fba38ba1169da2a0f347cee80b 229 Pfam PF06508 Queuosine biosynthesis protein QueC 10 220 1.5E-73 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMC99_02721 a1fbd8fba38ba1169da2a0f347cee80b 229 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 9 226 53.747 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMC99_02721 a1fbd8fba38ba1169da2a0f347cee80b 229 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 11 213 2.5E-59 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMC99_02721 a1fbd8fba38ba1169da2a0f347cee80b 229 Gene3D G3DSA:3.40.50.620 8 228 1.5E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02721 a1fbd8fba38ba1169da2a0f347cee80b 229 SUPERFAMILY SSF52402 8 228 2.65E-60 T 11-10-2018 AMC99_02721 a1fbd8fba38ba1169da2a0f347cee80b 229 PIRSF PIRSF006293 7 229 7.7E-75 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 AMC99_02817 0138e6baa6dda237a0f5b901ee2e9869 120 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 16 120 24.414 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AMC99_02817 0138e6baa6dda237a0f5b901ee2e9869 120 SUPERFAMILY SSF117782 16 120 5.89E-38 T 11-10-2018 IPR035439 UPF0145 domain superfamily AMC99_02817 0138e6baa6dda237a0f5b901ee2e9869 120 Gene3D G3DSA:3.30.110.70 17 120 1.5E-42 T 11-10-2018 AMC99_02817 0138e6baa6dda237a0f5b901ee2e9869 120 Pfam PF01906 Putative heavy-metal-binding 16 120 3.5E-40 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 AMC99_01385 b17b9935405db72589767f361a6026e7 312 Pfam PF00698 Acyl transferase domain 4 277 1.9E-39 T 11-10-2018 IPR014043 Acyl transferase AMC99_01385 b17b9935405db72589767f361a6026e7 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 301 2.3E-33 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AMC99_01385 b17b9935405db72589767f361a6026e7 312 Gene3D G3DSA:3.30.70.250 129 201 2.3E-90 T 11-10-2018 AMC99_01385 b17b9935405db72589767f361a6026e7 312 SUPERFAMILY SSF55048 130 199 8.24E-17 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMC99_01385 b17b9935405db72589767f361a6026e7 312 SUPERFAMILY SSF52151 1 308 4.71E-67 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMC99_01385 b17b9935405db72589767f361a6026e7 312 PIRSF PIRSF000446 1 311 1.1E-80 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMC99_01385 b17b9935405db72589767f361a6026e7 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 292 2.8E-83 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMC99_01385 b17b9935405db72589767f361a6026e7 312 Gene3D G3DSA:3.40.366.10 4 285 2.3E-90 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AMC99_01161 7d66d5840a8635336b71d77abb2b8e5e 772 SUPERFAMILY SSF52151 5 451 9.94E-27 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMC99_01161 7d66d5840a8635336b71d77abb2b8e5e 772 Gene3D G3DSA:3.40.1090.10 2 145 3.6E-5 T 11-10-2018 AMC99_01161 7d66d5840a8635336b71d77abb2b8e5e 772 Pfam PF11856 Protein of unknown function (DUF3376) 570 748 2.3E-24 T 11-10-2018 IPR024282 Domain of unknown function DUF3376 AMC99_01161 7d66d5840a8635336b71d77abb2b8e5e 772 Pfam PF01734 Patatin-like phospholipase 10 332 1.4E-14 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMC99_01161 7d66d5840a8635336b71d77abb2b8e5e 772 TIGRFAM TIGR03607 TIGR03607: patatin-related protein 5 726 5.1E-205 T 11-10-2018 IPR019894 Patatin-related protein AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 77 105 1.0E-45 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 1.0E-45 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 149 176 1.0E-45 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 43 57 1.0E-45 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 PRINTS PR00474 Glutamate 5-kinase family signature 117 138 1.0E-45 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 SUPERFAMILY SSF88697 275 364 1.34E-10 T 11-10-2018 IPR015947 PUA-like superfamily AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 SUPERFAMILY SSF53633 5 252 1.57E-59 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 Gene3D G3DSA:2.30.130.10 264 365 6.8E-16 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 261 32.477 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 PIRSF PIRSF000729 1 366 2.4E-102 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 Pfam PF00696 Amino acid kinase family 5 233 1.6E-42 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 Gene3D G3DSA:3.40.1160.10 1 260 1.9E-75 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 363 6.4E-97 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 205 222 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_02022 e9f7e613a094527e883e2407f2b1bd1c 379 Pfam PF01472 PUA domain 275 333 1.7E-6 T 11-10-2018 IPR002478 PUA domain GO:0003723 AMC99_02373 bae76ec86d73fe6b263e695957f8b6a8 149 Pfam PF01575 MaoC like domain 8 119 4.9E-26 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AMC99_02373 bae76ec86d73fe6b263e695957f8b6a8 149 Gene3D G3DSA:3.10.129.10 1 148 1.0E-45 T 11-10-2018 AMC99_02373 bae76ec86d73fe6b263e695957f8b6a8 149 SUPERFAMILY SSF54637 5 145 3.73E-36 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 Pfam PF00248 Aldo/keto reductase family 18 256 4.9E-43 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 PIRSF PIRSF000097 108 267 8.5E-42 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 PIRSF PIRSF000097 1 112 1.4E-28 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 Gene3D G3DSA:3.20.20.100 1 271 1.3E-101 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 121 138 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 37 61 7.1E-35 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 192 216 7.1E-35 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 155 184 7.1E-35 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 89 107 7.1E-35 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 PRINTS PR00069 Aldo-keto reductase signature 121 138 7.1E-35 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01806 f6f0d4d14474cd124a363ef053bdc24b 271 SUPERFAMILY SSF51430 4 266 1.96E-81 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 ProSitePatterns PS01312 SecA family signature. 487 502 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Pfam PF02810 SEC-C motif 896 913 4.0E-9 T 11-10-2018 IPR004027 SEC-C motif AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:3.90.1440.10 229 355 5.2E-181 T 11-10-2018 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Pfam PF07516 SecA Wing and Scaffold domain 612 820 6.3E-59 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 809 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 SMART SM00957 6 389 5.6E-296 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 SMART SM00958 228 345 5.2E-66 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:3.10.450.50 880 915 1.1E-6 T 11-10-2018 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF81886 614 904 8.11E-77 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 63 87 1.8E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 170 190 1.8E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 117 127 1.8E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 101 115 1.8E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 363 380 1.8E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 326 348 1.8E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 PRINTS PR00906 SecA protein signature 400 413 1.8E-69 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Pfam PF01043 SecA preprotein cross-linking domain 232 345 1.1E-38 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Pfam PF07517 SecA DEAD-like domain 6 389 2.5E-135 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:3.40.50.300 404 613 5.3E-82 T 11-10-2018 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF52540 403 611 2.5E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:1.10.3060.10 615 826 7.5E-64 T 11-10-2018 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 825 19.883 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF52540 5 402 4.2E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 SUPERFAMILY SSF81767 227 355 2.49E-43 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AMC99_00958 3469883b1824b38ac46c92eb1f732404 915 Gene3D G3DSA:3.40.50.300 23 402 5.2E-181 T 11-10-2018 AMC99_01895 e744689cf0e3d6449b7b55a16ea8bb6b 353 Gene3D G3DSA:3.40.50.1820 98 344 2.3E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01895 e744689cf0e3d6449b7b55a16ea8bb6b 353 SUPERFAMILY SSF53474 100 340 1.07E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01895 e744689cf0e3d6449b7b55a16ea8bb6b 353 Pfam PF00326 Prolyl oligopeptidase family 152 340 1.7E-19 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_02766 fddc63d23ea721a1dd79adc9c7b7d9f3 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 4.6E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_02766 fddc63d23ea721a1dd79adc9c7b7d9f3 231 Gene3D G3DSA:1.10.10.10 119 229 3.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02766 fddc63d23ea721a1dd79adc9c7b7d9f3 231 Gene3D G3DSA:3.40.50.2300 1 118 2.3E-33 T 11-10-2018 AMC99_02766 fddc63d23ea721a1dd79adc9c7b7d9f3 231 Pfam PF00072 Response regulator receiver domain 3 112 6.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02766 fddc63d23ea721a1dd79adc9c7b7d9f3 231 SUPERFAMILY SSF52172 1 174 5.27E-38 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02766 fddc63d23ea721a1dd79adc9c7b7d9f3 231 SMART SM00448 1 112 2.9E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02766 fddc63d23ea721a1dd79adc9c7b7d9f3 231 SMART SM00862 145 221 4.2E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_01991 225acca5bc4d8a1fada2efd8a1d3ee35 314 Pfam PF00849 RNA pseudouridylate synthase 88 247 6.7E-37 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01991 225acca5bc4d8a1fada2efd8a1d3ee35 314 Gene3D G3DSA:3.10.290.10 9 68 3.5E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMC99_01991 225acca5bc4d8a1fada2efd8a1d3ee35 314 SUPERFAMILY SSF55120 73 310 3.7E-78 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01991 225acca5bc4d8a1fada2efd8a1d3ee35 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01991 225acca5bc4d8a1fada2efd8a1d3ee35 314 Gene3D G3DSA:3.30.2350.10 80 314 2.2E-78 T 11-10-2018 AMC99_01991 225acca5bc4d8a1fada2efd8a1d3ee35 314 SMART SM00363 15 75 1.3E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01991 225acca5bc4d8a1fada2efd8a1d3ee35 314 SUPERFAMILY SSF55174 16 67 7.23E-10 T 11-10-2018 AMC99_01991 225acca5bc4d8a1fada2efd8a1d3ee35 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 310 4.1E-98 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01991 225acca5bc4d8a1fada2efd8a1d3ee35 314 Pfam PF01479 S4 domain 16 59 1.3E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_00401 f2f56fb9a48905d8e4ea757603422e91 70 SMART SM00357 4 69 3.7E-18 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMC99_00401 f2f56fb9a48905d8e4ea757603422e91 70 Pfam PF00313 'Cold-shock' DNA-binding domain 4 67 1.9E-21 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_00401 f2f56fb9a48905d8e4ea757603422e91 70 PRINTS PR00050 Cold shock protein signature 26 35 1.0E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_00401 f2f56fb9a48905d8e4ea757603422e91 70 PRINTS PR00050 Cold shock protein signature 5 20 1.0E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_00401 f2f56fb9a48905d8e4ea757603422e91 70 PRINTS PR00050 Cold shock protein signature 41 59 1.0E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_00401 f2f56fb9a48905d8e4ea757603422e91 70 Gene3D G3DSA:2.40.50.140 1 66 2.3E-23 T 11-10-2018 AMC99_00401 f2f56fb9a48905d8e4ea757603422e91 70 SUPERFAMILY SSF50249 3 67 4.93E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00401 f2f56fb9a48905d8e4ea757603422e91 70 PIRSF PIRSF002599 1 70 1.6E-19 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 Pfam PF02872 5'-nucleotidase, C-terminal domain 375 530 4.4E-43 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 274 297 1.8E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 504 523 1.8E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 432 455 1.8E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 239 256 1.8E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 PRINTS PR01607 Apyrase family signature 32 50 1.8E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 SUPERFAMILY SSF56300 28 364 1.46E-58 T 11-10-2018 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 SUPERFAMILY SSF55816 373 564 2.75E-50 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 Gene3D G3DSA:3.90.780.10 380 566 7.5E-57 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 Gene3D G3DSA:3.60.21.10 32 366 3.0E-57 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMC99_02311 ea720af72cbf5600725e0b36bc0a1904 569 Pfam PF00149 Calcineurin-like phosphoesterase 35 291 2.3E-9 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMC99_01317 e24f394c0389fcb94b7678d63094ece6 362 SUPERFAMILY SSF102114 65 278 2.35E-14 T 11-10-2018 AMC99_01317 e24f394c0389fcb94b7678d63094ece6 362 SMART SM00729 68 293 2.1E-6 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_01317 e24f394c0389fcb94b7678d63094ece6 362 Gene3D G3DSA:3.80.30.30 113 285 4.0E-7 T 11-10-2018 AMC99_01317 e24f394c0389fcb94b7678d63094ece6 362 Pfam PF04055 Radical SAM superfamily 73 250 9.1E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_00392 73be1d4c0152e169ef30154a8d5963ce 599 SUPERFAMILY SSF51905 67 491 3.76E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00392 73be1d4c0152e169ef30154a8d5963ce 599 Gene3D G3DSA:3.50.50.60 58 346 5.7E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00392 73be1d4c0152e169ef30154a8d5963ce 599 Gene3D G3DSA:3.50.50.60 409 599 1.2E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00392 73be1d4c0152e169ef30154a8d5963ce 599 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 67 273 1.3E-9 T 11-10-2018 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 SMART SM00304 329 382 8.3E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 SUPERFAMILY SSF47384 494 572 1.29E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 706 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 677 687 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 674 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 SMART SM00387 614 728 6.5E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 SMART SM00388 502 573 2.5E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 Gene3D G3DSA:1.10.287.130 506 569 2.6E-10 T 11-10-2018 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 SUPERFAMILY SSF158472 332 379 1.31E-9 T 11-10-2018 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 Gene3D G3DSA:3.30.565.10 578 731 2.8E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 Pfam PF00512 His Kinase A (phospho-acceptor) domain 504 570 3.1E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 Gene3D G3DSA:1.20.1480.50 292 384 5.1E-13 T 11-10-2018 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 Pfam PF00672 HAMP domain 332 378 1.2E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 SUPERFAMILY SSF55785 385 492 1.67E-7 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 PIRSF PIRSF037532 13 731 2.8E-199 T 11-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 615 724 1.9E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 SUPERFAMILY SSF55874 566 725 4.45E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01189 6935d9ce8016f2781263e18c3f1403c3 737 Gene3D G3DSA:3.30.450.20 385 492 2.3E-9 T 11-10-2018 AMC99_02269 ba10c97cd24acdc7f7cf59896b45dd9c 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 210 1.6E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_02269 ba10c97cd24acdc7f7cf59896b45dd9c 747 Pfam PF00593 TonB dependent receptor 355 746 1.7E-35 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02269 ba10c97cd24acdc7f7cf59896b45dd9c 747 SUPERFAMILY SSF56935 96 745 2.09E-84 T 11-10-2018 AMC99_02269 ba10c97cd24acdc7f7cf59896b45dd9c 747 Gene3D G3DSA:2.170.130.10 104 220 9.5E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02269 ba10c97cd24acdc7f7cf59896b45dd9c 747 Gene3D G3DSA:2.40.170.20 227 746 4.2E-52 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_00558 048bd98b907c2678b0b98f4267e694fa 379 Pfam PF11288 Protein of unknown function (DUF3089) 95 295 2.0E-64 T 11-10-2018 IPR021440 Protein of unknown function DUF3089 AMC99_00558 048bd98b907c2678b0b98f4267e694fa 379 Gene3D G3DSA:3.40.50.1820 119 251 3.2E-5 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00558 048bd98b907c2678b0b98f4267e694fa 379 SUPERFAMILY SSF53474 126 239 5.3E-9 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00584 a4baa77b08652927b872ddb1c714887f 176 SUPERFAMILY SSF55729 3 145 6.05E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_00584 a4baa77b08652927b872ddb1c714887f 176 Pfam PF13302 Acetyltransferase (GNAT) domain 7 139 3.8E-27 T 11-10-2018 IPR000182 GNAT domain AMC99_00584 a4baa77b08652927b872ddb1c714887f 176 Gene3D G3DSA:3.40.630.30 3 157 3.7E-37 T 11-10-2018 AMC99_01078 c32405687ce4710a4d9b27daa334134f 149 Gene3D G3DSA:1.10.1510.10 1 93 7.1E-25 T 11-10-2018 AMC99_01078 c32405687ce4710a4d9b27daa334134f 149 SUPERFAMILY SSF89095 1 147 4.97E-34 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AMC99_01078 c32405687ce4710a4d9b27daa334134f 149 Gene3D G3DSA:1.10.10.410 94 148 2.2E-11 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMC99_01078 c32405687ce4710a4d9b27daa334134f 149 Pfam PF09424 Yqey-like protein 4 147 1.3E-41 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 AMC99_01378 40037835f046905963414e9ae0cfc8c6 298 Pfam PF00561 alpha/beta hydrolase fold 40 280 8.8E-25 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01378 40037835f046905963414e9ae0cfc8c6 298 Gene3D G3DSA:3.40.50.1820 14 295 1.4E-87 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01378 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 239 255 1.8E-25 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01378 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 43 61 1.8E-25 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01378 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 109 122 1.8E-25 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01378 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 272 294 1.8E-25 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01378 40037835f046905963414e9ae0cfc8c6 298 PRINTS PR00412 Epoxide hydrolase signature 63 78 1.8E-25 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01378 40037835f046905963414e9ae0cfc8c6 298 SUPERFAMILY SSF53474 14 297 1.47E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 13 304 27.054 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 1.0E-30 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 1.0E-30 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 PRINTS PR01755 Bacterial translocase SecF protein signature 40 55 1.0E-30 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 PRINTS PR01755 Bacterial translocase SecF protein signature 241 256 1.0E-30 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 Gene3D G3DSA:1.20.1640.10 122 305 2.7E-10 T 11-10-2018 AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 Pfam PF07549 SecD/SecF GG Motif 37 60 1.7E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 41 293 1.4E-75 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 127 290 1.3E-47 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 SUPERFAMILY SSF82866 77 301 8.37E-40 T 11-10-2018 AMC99_00654 da23373016f7daac1b8ce0a3b9a3b061 325 Pfam PF02355 Protein export membrane protein 119 301 9.9E-66 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMC99_00875 7e8d822a90d72953bd56222b0392fad4 234 PIRSF PIRSF000441 1 225 4.1E-73 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 AMC99_00875 7e8d822a90d72953bd56222b0392fad4 234 Gene3D G3DSA:1.10.3130.10 5 65 2.0E-14 T 11-10-2018 AMC99_00875 7e8d822a90d72953bd56222b0392fad4 234 Gene3D G3DSA:2.160.10.10 66 173 1.6E-30 T 11-10-2018 AMC99_00875 7e8d822a90d72953bd56222b0392fad4 234 SUPERFAMILY SSF51161 5 167 3.19E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMC99_00875 7e8d822a90d72953bd56222b0392fad4 234 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMC99_00875 7e8d822a90d72953bd56222b0392fad4 234 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 70 106 6.1E-7 T 11-10-2018 IPR001451 Hexapeptide repeat AMC99_00875 7e8d822a90d72953bd56222b0392fad4 234 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 1.3E-8 T 11-10-2018 IPR001451 Hexapeptide repeat AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 60 80 1.1E-12 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 350 364 1.1E-12 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 32 46 1.1E-12 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 410 425 1.1E-12 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 577 594 1.1E-12 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00943 Copper-transporting ATPase signature 196 215 1.1E-12 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 Pfam PF00403 Heavy-metal-associated domain 20 79 6.7E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 427 441 3.9E-16 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 600 619 3.9E-16 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 277 291 3.9E-16 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 635 3.9E-16 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 548 558 3.9E-16 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 ProSitePatterns PS01047 Heavy-metal-associated domain. 22 51 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF81665 174 680 2.62E-13 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 429 435 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF55008 18 83 3.93E-17 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 Pfam PF00122 E1-E2 ATPase 231 406 7.6E-43 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 147 702 3.3E-139 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF81653 234 327 4.32E-20 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 165 702 3.5E-134 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 Gene3D G3DSA:3.40.50.1000 407 637 9.4E-53 T 11-10-2018 IPR023214 HAD superfamily AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 Pfam PF00702 haloacid dehalogenase-like hydrolase 424 613 1.2E-23 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 SUPERFAMILY SSF56784 427 700 1.15E-37 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 Gene3D G3DSA:2.70.150.20 220 332 2.8E-25 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 Gene3D G3DSA:3.30.70.100 18 84 3.5E-17 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 Gene3D G3DSA:3.40.1110.10 437 533 9.4E-53 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 184 703 3.8E-102 T 11-10-2018 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 199 439 7.5E-32 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMC99_00353 8b2cbd5c0490037c84ca0e8d554597b9 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 528 688 2.3E-25 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 Gene3D G3DSA:3.90.980.10 106 236 7.3E-34 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 SMART SM00493 255 326 5.5E-16 T 11-10-2018 IPR006171 TOPRIM domain AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 Hamap MF_00974 DNA primase [dnaG]. 2 589 25.485 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 247 4.4E-36 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 SMART SM00400 34 88 3.5E-29 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 PIRSF PIRSF002811 534 608 480.0 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 PIRSF PIRSF002811 1 420 2.5E-137 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 SUPERFAMILY SSF56731 112 417 6.15E-97 T 11-10-2018 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 Pfam PF13662 Toprim domain 255 320 6.3E-17 T 11-10-2018 IPR006171 TOPRIM domain AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 Gene3D G3DSA:3.40.1360.10 237 362 8.0E-43 T 11-10-2018 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 TIGRFAM TIGR01391 dnaG: DNA primase 5 415 2.6E-130 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 SUPERFAMILY SSF57783 2 99 2.55E-33 T 11-10-2018 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 Gene3D G3DSA:3.90.580.10 1 98 1.1E-34 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AMC99_01076 71c44e9b6200fdfe1d2d589865075ecb 629 Pfam PF01807 CHC2 zinc finger 5 96 7.8E-33 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 SUPERFAMILY SSF100879 257 357 5.1E-27 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 Gene3D G3DSA:3.30.70.270 24 183 1.2E-64 T 11-10-2018 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 Gene3D G3DSA:1.10.150.20 185 247 1.1E-16 T 11-10-2018 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 Hamap MF_01113 DNA polymerase IV [dinB]. 21 376 38.997 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 Pfam PF11799 impB/mucB/samB family C-terminal domain 252 364 8.8E-17 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 SUPERFAMILY SSF56672 21 253 8.36E-93 T 11-10-2018 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 Gene3D G3DSA:2.30.40.20 41 92 1.2E-64 T 11-10-2018 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 Pfam PF11798 IMS family HHH motif 185 216 1.2E-5 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 Pfam PF00817 impB/mucB/samB family 27 173 1.8E-49 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMC99_00370 c893a788f41fa40935c9a204cec20fb9 377 Gene3D G3DSA:3.30.1490.100 259 366 1.6E-27 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 AMC99_02636 08f10e46c0c0c7894fb4d1931939e075 309 SUPERFAMILY SSF52467 188 309 6.0E-45 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMC99_02636 08f10e46c0c0c7894fb4d1931939e075 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 3.5E-34 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 AMC99_02636 08f10e46c0c0c7894fb4d1931939e075 309 PIRSF PIRSF000089 1 309 1.3E-104 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 AMC99_02636 08f10e46c0c0c7894fb4d1931939e075 309 SMART SM00893 3 181 8.0E-54 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMC99_02636 08f10e46c0c0c7894fb4d1931939e075 309 Pfam PF01012 Electron transfer flavoprotein domain 3 167 1.4E-40 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMC99_02636 08f10e46c0c0c7894fb4d1931939e075 309 Gene3D G3DSA:3.40.50.1220 183 309 3.7E-55 T 11-10-2018 AMC99_02636 08f10e46c0c0c7894fb4d1931939e075 309 Gene3D G3DSA:3.40.50.620 3 182 1.6E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02636 08f10e46c0c0c7894fb4d1931939e075 309 SUPERFAMILY SSF52402 2 182 5.16E-55 T 11-10-2018 AMC99_02426 b294134f9e5e7d0027cd6038ec45864b 165 Gene3D G3DSA:2.170.150.20 23 165 1.3E-56 T 11-10-2018 AMC99_02426 b294134f9e5e7d0027cd6038ec45864b 165 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 42 164 4.1E-44 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMC99_02426 b294134f9e5e7d0027cd6038ec45864b 165 Pfam PF01641 SelR domain 45 164 2.5E-49 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMC99_02426 b294134f9e5e7d0027cd6038ec45864b 165 SUPERFAMILY SSF51316 40 164 3.82E-53 T 11-10-2018 IPR011057 Mss4-like superfamily AMC99_01538 85b355c98da0ac602aa1a9fc12b885f0 72 TIGRFAM TIGR00012 L29: ribosomal protein uL29 9 64 1.3E-21 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01538 85b355c98da0ac602aa1a9fc12b885f0 72 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 3 64 16.726 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01538 85b355c98da0ac602aa1a9fc12b885f0 72 SUPERFAMILY SSF46561 7 65 5.63E-20 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01538 85b355c98da0ac602aa1a9fc12b885f0 72 Gene3D G3DSA:1.10.287.310 6 66 1.7E-23 T 11-10-2018 AMC99_01538 85b355c98da0ac602aa1a9fc12b885f0 72 Pfam PF00831 Ribosomal L29 protein 9 64 1.8E-23 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_00870 be6de5021722908a4f14697037f2ec09 401 SUPERFAMILY SSF52540 121 382 2.73E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00870 be6de5021722908a4f14697037f2ec09 401 Pfam PF13469 Sulfotransferase family 126 367 1.9E-25 T 11-10-2018 AMC99_00870 be6de5021722908a4f14697037f2ec09 401 Gene3D G3DSA:3.40.50.300 42 401 2.4E-70 T 11-10-2018 AMC99_00792 b22f259c4953f3a19e3cebea2bb33d6c 318 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 314 2.0E-54 T 11-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 AMC99_00411 82bcb4724bbac8b3449a1973dbb19a68 135 Gene3D G3DSA:3.90.1590.10 1 127 4.8E-17 T 11-10-2018 AMC99_00411 82bcb4724bbac8b3449a1973dbb19a68 135 SUPERFAMILY SSF51316 1 134 7.53E-44 T 11-10-2018 IPR011057 Mss4-like superfamily AMC99_00411 82bcb4724bbac8b3449a1973dbb19a68 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 115 6.7E-28 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AMC99_01373 85e6467082575a07417d6a345588982b 722 SUPERFAMILY SSF55785 31 137 8.38E-10 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_01373 85e6467082575a07417d6a345588982b 722 SUPERFAMILY SSF55073 155 313 1.41E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_01373 85e6467082575a07417d6a345588982b 722 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 309 1.4E-32 T 11-10-2018 IPR000160 GGDEF domain AMC99_01373 85e6467082575a07417d6a345588982b 722 Gene3D G3DSA:3.30.70.270 153 312 1.3E-45 T 11-10-2018 AMC99_01373 85e6467082575a07417d6a345588982b 722 Gene3D G3DSA:3.30.450.20 15 152 1.5E-11 T 11-10-2018 AMC99_01373 85e6467082575a07417d6a345588982b 722 SMART SM00052 321 564 2.7E-101 T 11-10-2018 IPR001633 EAL domain AMC99_01373 85e6467082575a07417d6a345588982b 722 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 306 1.1E-38 T 11-10-2018 IPR000160 GGDEF domain AMC99_01373 85e6467082575a07417d6a345588982b 722 SUPERFAMILY SSF141868 326 569 1.44E-85 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_01373 85e6467082575a07417d6a345588982b 722 Pfam PF08448 PAS fold 34 141 1.5E-6 T 11-10-2018 IPR013656 PAS fold-4 AMC99_01373 85e6467082575a07417d6a345588982b 722 Gene3D G3DSA:3.20.20.450 313 564 1.9E-93 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_01373 85e6467082575a07417d6a345588982b 722 SMART SM00267 139 311 2.5E-45 T 11-10-2018 IPR000160 GGDEF domain AMC99_01373 85e6467082575a07417d6a345588982b 722 Pfam PF00563 EAL domain 327 557 2.7E-74 T 11-10-2018 IPR001633 EAL domain AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 Gene3D G3DSA:2.120.10.90 529 721 9.1E-20 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 SMART SM00434 20 485 5.6E-210 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 21 764 1.2E-257 T 11-10-2018 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 Gene3D G3DSA:3.30.1360.40 246 355 2.2E-176 T 11-10-2018 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 Gene3D G3DSA:3.90.199.10 41 511 2.2E-176 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 41 480 9.0E-136 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 SUPERFAMILY SSF101904 526 763 4.05E-50 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 Gene3D G3DSA:1.10.268.10 393 478 2.2E-176 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 624 667 2.1 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 673 710 3.5E-5 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 573 608 7.6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 13 765 31.727 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_01766 7a7c088b5c8a55cf7c643ed9f4bed238 767 SUPERFAMILY SSF56719 40 502 7.46E-151 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMC99_00016 f88acb828866314524f46549ccff7a4a 290 Gene3D G3DSA:3.40.50.1820 50 286 6.3E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00016 f88acb828866314524f46549ccff7a4a 290 SUPERFAMILY SSF53474 52 284 1.69E-27 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00016 f88acb828866314524f46549ccff7a4a 290 Pfam PF01738 Dienelactone hydrolase family 63 284 3.4E-33 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AMC99_00652 e8bd747346c1a88c99433317acbfa939 107 PRINTS PR01853 Bacterial YajC preprotein translocase signature 56 74 2.9E-13 T 11-10-2018 IPR003849 Preprotein translocase YajC AMC99_00652 e8bd747346c1a88c99433317acbfa939 107 PRINTS PR01853 Bacterial YajC preprotein translocase signature 18 38 2.9E-13 T 11-10-2018 IPR003849 Preprotein translocase YajC AMC99_00652 e8bd747346c1a88c99433317acbfa939 107 SMART SM01323 16 98 2.0E-41 T 11-10-2018 IPR003849 Preprotein translocase YajC AMC99_00652 e8bd747346c1a88c99433317acbfa939 107 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 98 1.3E-27 T 11-10-2018 IPR003849 Preprotein translocase YajC AMC99_00652 e8bd747346c1a88c99433317acbfa939 107 Pfam PF02699 Preprotein translocase subunit 21 94 3.0E-27 T 11-10-2018 IPR003849 Preprotein translocase YajC AMC99_00479 ad37b6d1e2c07b11f7dcd8a412a86347 585 Pfam PF00501 AMP-binding enzyme 73 490 9.4E-102 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_00479 ad37b6d1e2c07b11f7dcd8a412a86347 585 ProSitePatterns PS00455 Putative AMP-binding domain signature. 232 243 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_00479 ad37b6d1e2c07b11f7dcd8a412a86347 585 Pfam PF13193 AMP-binding enzyme C-terminal domain 499 575 3.2E-18 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_00479 ad37b6d1e2c07b11f7dcd8a412a86347 585 Gene3D G3DSA:3.30.300.310 486 585 1.1E-29 T 11-10-2018 AMC99_00479 ad37b6d1e2c07b11f7dcd8a412a86347 585 Gene3D G3DSA:3.40.50.980 90 248 4.2E-121 T 11-10-2018 AMC99_00479 ad37b6d1e2c07b11f7dcd8a412a86347 585 SUPERFAMILY SSF56801 67 584 4.58E-149 T 11-10-2018 AMC99_00479 ad37b6d1e2c07b11f7dcd8a412a86347 585 Gene3D G3DSA:3.40.50.980 86 405 4.2E-121 T 11-10-2018 AMC99_00479 ad37b6d1e2c07b11f7dcd8a412a86347 585 Gene3D G3DSA:2.30.38.10 406 483 4.2E-121 T 11-10-2018 AMC99_01396 781e94248cd7be1f5a3e67a52148e088 306 SMART SM00911 126 209 7.7E-24 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_01396 781e94248cd7be1f5a3e67a52148e088 306 Gene3D G3DSA:3.30.450.20 1 64 1.1E-13 T 11-10-2018 AMC99_01396 781e94248cd7be1f5a3e67a52148e088 306 Gene3D G3DSA:2.10.70.100 69 115 3.2E-14 T 11-10-2018 AMC99_01396 781e94248cd7be1f5a3e67a52148e088 306 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 120 4.0E-11 T 11-10-2018 IPR000014 PAS domain AMC99_01396 781e94248cd7be1f5a3e67a52148e088 306 Gene3D G3DSA:3.30.565.10 198 305 3.1E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01396 781e94248cd7be1f5a3e67a52148e088 306 SMART SM00086 71 113 1.7E-8 T 11-10-2018 IPR001610 PAC motif AMC99_01396 781e94248cd7be1f5a3e67a52148e088 306 SUPERFAMILY SSF55785 7 115 6.11E-20 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_01396 781e94248cd7be1f5a3e67a52148e088 306 Pfam PF07536 HWE histidine kinase 126 203 3.9E-19 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_01396 781e94248cd7be1f5a3e67a52148e088 306 Pfam PF08447 PAS fold 23 105 1.5E-17 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMC99_02622 3b41de66594a60c0362d2fab988dd577 214 PIRSF PIRSF000190 3 214 4.6E-65 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_02622 3b41de66594a60c0362d2fab988dd577 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 170 214 1.4E-11 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_02622 3b41de66594a60c0362d2fab988dd577 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 12 198 2.2E-58 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_02622 3b41de66594a60c0362d2fab988dd577 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 115 7.4E-24 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_02622 3b41de66594a60c0362d2fab988dd577 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 180 193 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_02622 3b41de66594a60c0362d2fab988dd577 214 SUPERFAMILY SSF50475 18 214 2.27E-55 T 11-10-2018 AMC99_02622 3b41de66594a60c0362d2fab988dd577 214 Gene3D G3DSA:2.30.110.10 5 214 2.5E-68 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMC99_02622 3b41de66594a60c0362d2fab988dd577 214 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 6 214 34.069 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_01197 0b56498eda12a3dcdb04c8152a836e58 217 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 47 54 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_01197 0b56498eda12a3dcdb04c8152a836e58 217 Pfam PF00484 Carbonic anhydrase 43 201 2.3E-46 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_01197 0b56498eda12a3dcdb04c8152a836e58 217 SUPERFAMILY SSF53056 5 215 5.89E-59 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMC99_01197 0b56498eda12a3dcdb04c8152a836e58 217 SMART SM00947 35 207 7.8E-61 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_01197 0b56498eda12a3dcdb04c8152a836e58 217 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 92 112 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_01197 0b56498eda12a3dcdb04c8152a836e58 217 Gene3D G3DSA:3.40.1050.10 2 214 1.2E-65 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 Gene3D G3DSA:3.40.50.970 236 434 8.5E-64 T 11-10-2018 AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 21 620 4.0E-198 T 11-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 SUPERFAMILY SSF52922 521 623 9.89E-16 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 SUPERFAMILY SSF52518 245 506 4.81E-62 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 268 431 1.6E-53 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 525 586 1.5E-7 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 Gene3D G3DSA:3.40.50.920 516 625 1.5E-22 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 SUPERFAMILY SSF53323 23 224 4.05E-18 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 Gene3D G3DSA:3.40.920.10 20 228 3.2E-14 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMC99_01337 2e6a925572b72c340cb16f6806dab069 625 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 29 218 7.8E-34 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMC99_01326 d4f4bea1f5ea0d96e974c23e14761b81 224 Pfam PF00005 ABC transporter 25 173 2.4E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_01326 d4f4bea1f5ea0d96e974c23e14761b81 224 Gene3D G3DSA:3.40.50.300 3 224 1.1E-58 T 11-10-2018 AMC99_01326 d4f4bea1f5ea0d96e974c23e14761b81 224 SMART SM00382 34 222 3.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01326 d4f4bea1f5ea0d96e974c23e14761b81 224 SUPERFAMILY SSF52540 6 223 1.77E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01326 d4f4bea1f5ea0d96e974c23e14761b81 224 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_02701 c77375affa92c784417bc570350cc649 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 7.3E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_02701 c77375affa92c784417bc570350cc649 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 7.3E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_02701 c77375affa92c784417bc570350cc649 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 36 66 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMC99_02701 c77375affa92c784417bc570350cc649 200 SUPERFAMILY SSF46689 11 93 1.23E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_02701 c77375affa92c784417bc570350cc649 200 Gene3D G3DSA:1.10.357.10 5 200 9.8E-34 T 11-10-2018 AMC99_02701 c77375affa92c784417bc570350cc649 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 6.3E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 SUPERFAMILY SSF51735 293 472 7.6E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 Gene3D G3DSA:1.10.1040.50 480 677 2.1E-67 T 11-10-2018 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 Gene3D G3DSA:3.40.50.720 292 479 2.9E-65 T 11-10-2018 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 188 5.8E-39 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 SUPERFAMILY SSF52096 3 288 2.23E-65 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 Gene3D G3DSA:3.90.226.10 2 290 7.1E-86 T 11-10-2018 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 SUPERFAMILY SSF48179 476 609 2.3E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 SUPERFAMILY SSF48179 591 677 4.08E-20 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 598 660 8.7E-6 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 477 561 6.7E-18 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMC99_00476 e375e716dfff5b93d5e7746ec2e9c769 678 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 296 471 3.2E-62 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 Gene3D G3DSA:3.40.50.720 1 269 2.0E-88 T 11-10-2018 AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 PRINTS PR00084 Mannitol dehydrogenase signature 167 180 6.9E-14 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 PRINTS PR00084 Mannitol dehydrogenase signature 206 219 6.9E-14 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 PRINTS PR00084 Mannitol dehydrogenase signature 236 251 6.9E-14 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 PRINTS PR00084 Mannitol dehydrogenase signature 29 39 6.9E-14 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 28 176 1.9E-28 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 SUPERFAMILY SSF51735 3 270 5.12E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 Gene3D G3DSA:1.10.1040.10 270 448 2.6E-53 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 SUPERFAMILY SSF48179 271 420 1.33E-45 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_00503 4e6643410c69a3101e52467f2e8c2b3c 456 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 206 393 1.9E-61 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 SUPERFAMILY SSF50677 218 424 1.44E-33 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 Pfam PF08264 Anticodon-binding domain of tRNA 770 927 1.1E-21 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 32 725 2.3E-165 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 SUPERFAMILY SSF47323 738 994 5.67E-53 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 611 624 2.4E-18 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 54 65 2.4E-18 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 647 656 2.4E-18 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 459 474 2.4E-18 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 Gene3D G3DSA:3.40.50.620 28 715 1.1E-208 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 61 72 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 Gene3D G3DSA:1.10.730.20 726 994 3.4E-76 T 11-10-2018 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 SUPERFAMILY SSF52374 7 734 2.41E-130 T 11-10-2018 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 Gene3D G3DSA:3.90.740.10 209 466 1.1E-208 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMC99_02646 056cac6ca4ba5fcf96d0293fa726553c 994 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 5 994 18.941 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 13 1376 18.704 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 9.4E-91 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:1.10.274.100 491 571 3.3E-18 T 11-10-2018 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:1.10.274.100 572 651 4.9E-14 T 11-10-2018 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:1.10.132.30 652 797 1.7E-61 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF05000 RNA polymerase Rpb1, domain 4 684 762 5.8E-17 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF04998 RNA polymerase Rpb1, domain 5 773 1314 1.3E-73 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:1.10.150.390 1315 1377 3.1E-27 T 11-10-2018 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:2.40.50.100 1029 1127 2.9E-26 T 11-10-2018 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 SUPERFAMILY SSF64484 16 1362 0.0 T 11-10-2018 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:1.10.40.90 375 417 5.7E-19 T 11-10-2018 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 SMART SM00663 236 515 1.4E-180 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:2.40.50.100 1152 1215 2.7E-65 T 11-10-2018 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:2.40.50.100 954 1028 1.3E-21 T 11-10-2018 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 486 3.8E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 392 7.5E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1026 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Gene3D G3DSA:1.10.1790.20 1136 1313 2.7E-65 T 11-10-2018 AMC99_02807 031b633433cce6d9be55cc890ed9f153 1430 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 655 3.1E-25 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF50249 611 696 9.42E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF46915 229 329 1.7E-20 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 696 29.862 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Gene3D G3DSA:3.30.1370.10 553 624 7.4E-20 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 SMART SM00322 555 620 2.1E-12 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Gene3D G3DSA:3.30.230.70 234 552 1.3E-114 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 323 2.1E-15 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 694 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF03725 3' exoribonuclease family, domain 2 147 212 2.6E-10 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF03725 3' exoribonuclease family, domain 2 463 531 2.5E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Gene3D G3DSA:2.40.50.140 625 697 5.5E-32 T 11-10-2018 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF55666 145 236 7.07E-24 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF54211 306 495 1.01E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF00575 S1 RNA binding domain 622 693 9.2E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF00013 KH domain 559 616 1.2E-10 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 2.2E-21 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Pfam PF01138 3' exoribonuclease family, domain 1 326 459 7.5E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF54211 5 144 3.44E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 Gene3D G3DSA:3.30.230.70 1 232 1.1E-79 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 PIRSF PIRSF005499 1 723 4.1E-290 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF55666 453 551 4.45E-27 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 SMART SM00316 623 693 3.1E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMC99_00740 e9f8d83bf556c97ee741526a283424bd 762 SUPERFAMILY SSF54791 555 632 7.17E-18 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AMC99_02674 220d00a14c97a200b39242509512acb4 95 SMART SM00271 38 92 5.2E-4 T 11-10-2018 IPR001623 DnaJ domain AMC99_02674 220d00a14c97a200b39242509512acb4 95 SUPERFAMILY SSF46565 36 91 6.8E-13 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_02674 220d00a14c97a200b39242509512acb4 95 Gene3D G3DSA:1.10.287.110 27 90 7.0E-13 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_00930 ee0ffca9179af22d164c36a40511f8c8 369 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 362 65.707 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMC99_00930 ee0ffca9179af22d164c36a40511f8c8 369 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 357 1.5E-106 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMC99_00930 ee0ffca9179af22d164c36a40511f8c8 369 Gene3D G3DSA:1.20.1090.10 174 366 1.8E-57 T 11-10-2018 AMC99_00930 ee0ffca9179af22d164c36a40511f8c8 369 Gene3D G3DSA:3.40.50.1970 1 173 1.2E-59 T 11-10-2018 AMC99_00930 ee0ffca9179af22d164c36a40511f8c8 369 PIRSF PIRSF001455 9 368 3.7E-103 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMC99_00930 ee0ffca9179af22d164c36a40511f8c8 369 Pfam PF01761 3-dehydroquinate synthase 68 331 1.6E-95 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 AMC99_00930 ee0ffca9179af22d164c36a40511f8c8 369 SUPERFAMILY SSF56796 6 363 2.22E-105 T 11-10-2018 AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 277 294 5.5E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 294 314 5.5E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 1 311 5.2E-137 T 11-10-2018 IPR014317 Transcription activator PspF AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 Gene3D G3DSA:1.10.10.60 239 314 6.3E-12 T 11-10-2018 AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 SUPERFAMILY SSF46689 195 313 2.06E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 67 82 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 Pfam PF02954 Bacterial regulatory protein, Fis family 272 310 9.0E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 SUPERFAMILY SSF52540 2 217 2.18E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 Gene3D G3DSA:1.10.8.60 153 234 4.4E-19 T 11-10-2018 AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 195 204 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 Pfam PF00158 Sigma-54 interaction domain 3 144 1.7E-56 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 SMART SM00382 1 152 4.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01688 8b769d109114b4b8f76ca56bf27f9be4 315 Gene3D G3DSA:3.40.50.300 1 152 1.6E-53 T 11-10-2018 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 SUPERFAMILY SSF51971 142 403 7.06E-64 T 11-10-2018 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 Gene3D G3DSA:3.50.50.60 140 248 4.5E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 SUPERFAMILY SSF46548 2 154 3.14E-42 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 8.0E-24 T 11-10-2018 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 PRINTS PR00419 Adrenodoxin reductase family signature 210 220 8.0E-24 T 11-10-2018 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 8.0E-24 T 11-10-2018 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 8.0E-24 T 11-10-2018 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 29 130 2.5E-24 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 SUPERFAMILY SSF51971 369 475 6.12E-12 T 11-10-2018 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 459 2.4E-30 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 477 5.7E-212 T 11-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 Gene3D G3DSA:1.10.1060.10 21 139 1.8E-23 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_02379 40fde7e998363c6c9dc82051b3c576a6 478 Gene3D G3DSA:3.50.50.60 249 402 1.1E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 200 6.1E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF03764 Elongation factor G, domain IV 497 615 5.8E-43 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF54980 420 498 3.96E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF03144 Elongation factor Tu domain 2 343 409 1.2E-12 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF50447 284 422 3.03E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:2.40.30.10 314 423 1.9E-41 T 11-10-2018 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 114 125 1.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 150 159 1.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 PRINTS PR00315 GTP-binding elongation factor signature 98 108 1.1E-15 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:3.30.70.240 622 692 2.9E-89 T 11-10-2018 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF54211 497 616 2.78E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 SMART SM00838 618 705 4.2E-55 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:3.30.230.10 502 705 2.9E-89 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF52540 5 301 1.96E-106 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Hamap MF_00054_B Elongation factor G [fusA]. 6 709 111.665 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF00009 Elongation factor Tu GTP binding domain 9 301 3.4E-66 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF14492 Elongation Factor G, domain II 422 495 1.2E-33 T 11-10-2018 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 708 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:3.30.70.870 424 501 1.2E-31 T 11-10-2018 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Gene3D G3DSA:3.40.50.300 1 313 6.3E-110 T 11-10-2018 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 SMART SM00889 498 616 1.1E-62 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 SUPERFAMILY SSF54980 621 707 3.36E-30 T 11-10-2018 IPR035647 EF-G domain III/V-like AMC99_01549 06f8d006cb186fedb42c7f22cf6bdb6b 710 Pfam PF00679 Elongation factor G C-terminus 619 704 1.5E-31 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR01900 YidC translocation/secretion protein signature 354 370 2.9E-13 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR01900 YidC translocation/secretion protein signature 502 517 2.9E-13 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR01900 YidC translocation/secretion protein signature 521 545 2.9E-13 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 367 3.1E-89 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 Gene3D G3DSA:2.70.98.90 80 345 1.8E-33 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 Pfam PF02096 60Kd inner membrane protein 369 565 6.3E-59 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 Pfam PF14849 YidC periplasmic domain 84 358 1.2E-72 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 568 20.708 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR00701 60kDa inner membrane protein signature 430 453 8.0E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR00701 60kDa inner membrane protein signature 339 359 8.0E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR00701 60kDa inner membrane protein signature 3 24 8.0E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 PRINTS PR00701 60kDa inner membrane protein signature 262 277 8.0E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AMC99_00221 09cf622b288e5b84ffca6fd9728d49d8 594 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 368 565 8.8E-68 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 18 29 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 Gene3D G3DSA:3.40.50.620 3 330 8.2E-125 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 189 199 2.0E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 15 27 2.0E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 57 2.0E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 205 213 2.0E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 PRINTS PR00987 Glutamyl-tRNA synthetase signature 29 40 2.0E-25 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 12 472 6.6E-149 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 12 320 3.6E-92 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 11 473 30.957 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 SUPERFAMILY SSF48163 315 470 4.05E-38 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 SUPERFAMILY SSF52374 12 314 1.5E-102 T 11-10-2018 AMC99_01234 57c291bee9b9a0144c2b9064d4191170 477 Gene3D G3DSA:1.10.10.350 375 474 2.2E-24 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_00541 b4cdac5c4257f62c53b3579f84f14c78 92 PIRSF PIRSF003113 1 92 5.5E-25 T 11-10-2018 IPR002634 BolA protein AMC99_00541 b4cdac5c4257f62c53b3579f84f14c78 92 Gene3D G3DSA:3.30.300.90 1 92 3.2E-25 T 11-10-2018 AMC99_00541 b4cdac5c4257f62c53b3579f84f14c78 92 SUPERFAMILY SSF82657 4 92 2.62E-24 T 11-10-2018 IPR036065 BolA-like superfamily AMC99_00541 b4cdac5c4257f62c53b3579f84f14c78 92 Pfam PF01722 BolA-like protein 15 92 8.1E-24 T 11-10-2018 IPR002634 BolA protein AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 Pfam PF01687 Riboflavin kinase 184 307 3.3E-36 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 Gene3D G3DSA:3.40.50.620 1 186 1.9E-56 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 SMART SM00904 183 308 2.4E-61 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 Pfam PF06574 FAD synthetase 12 167 4.6E-45 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 SUPERFAMILY SSF82114 174 308 2.4E-43 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 PIRSF PIRSF004491 1 313 2.7E-95 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 307 5.2E-75 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 80 1.5E-7 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 SUPERFAMILY SSF52374 17 197 1.1E-32 T 11-10-2018 AMC99_02647 6f5bec3eae69801a9dc5cb3e526f9853 313 Gene3D G3DSA:2.40.30.30 188 313 9.1E-41 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 Gene3D G3DSA:3.40.50.720 5 331 2.8E-138 T 11-10-2018 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 8.6E-56 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 Gene3D G3DSA:3.30.360.10 130 317 2.8E-138 T 11-10-2018 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 119 4.6E-33 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 333 2.7E-138 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 334 36.258 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 SMART SM00859 4 121 6.3E-44 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 SUPERFAMILY SSF55347 131 321 3.87E-75 T 11-10-2018 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 231 245 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 PIRSF PIRSF000148 2 338 1.3E-129 T 11-10-2018 AMC99_01408 a80a70dedca7e4c38ba36aa2d4177104 341 SUPERFAMILY SSF51735 3 159 4.95E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00837 84086238f351dc634737e13abf291b7c 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 37 52 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMC99_00837 84086238f351dc634737e13abf291b7c 599 Gene3D G3DSA:2.40.50.250 476 592 6.3E-130 T 11-10-2018 AMC99_00837 84086238f351dc634737e13abf291b7c 599 Pfam PF03144 Elongation factor Tu domain 2 212 282 3.6E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMC99_00837 84086238f351dc634737e13abf291b7c 599 SUPERFAMILY SSF54980 392 506 1.77E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like AMC99_00837 84086238f351dc634737e13abf291b7c 599 Pfam PF00679 Elongation factor G C-terminus 391 471 2.2E-19 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AMC99_00837 84086238f351dc634737e13abf291b7c 599 SUPERFAMILY SSF54980 296 381 1.63E-12 T 11-10-2018 IPR035647 EF-G domain III/V-like AMC99_00837 84086238f351dc634737e13abf291b7c 599 SUPERFAMILY SSF52540 1 198 1.1E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00837 84086238f351dc634737e13abf291b7c 599 Pfam PF00009 Elongation factor Tu GTP binding domain 1 188 3.3E-51 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00837 84086238f351dc634737e13abf291b7c 599 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 1 592 6.4E-277 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AMC99_00837 84086238f351dc634737e13abf291b7c 599 Gene3D G3DSA:2.40.30.10 192 293 3.6E-28 T 11-10-2018 AMC99_00837 84086238f351dc634737e13abf291b7c 599 PRINTS PR00315 GTP-binding elongation factor signature 116 125 2.2E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00837 84086238f351dc634737e13abf291b7c 599 PRINTS PR00315 GTP-binding elongation factor signature 44 52 2.2E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00837 84086238f351dc634737e13abf291b7c 599 PRINTS PR00315 GTP-binding elongation factor signature 64 74 2.2E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00837 84086238f351dc634737e13abf291b7c 599 PRINTS PR00315 GTP-binding elongation factor signature 80 91 2.2E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00837 84086238f351dc634737e13abf291b7c 599 Gene3D G3DSA:3.40.50.300 1 191 1.2E-61 T 11-10-2018 AMC99_00837 84086238f351dc634737e13abf291b7c 599 Gene3D G3DSA:3.30.70.240 383 475 6.3E-130 T 11-10-2018 AMC99_00837 84086238f351dc634737e13abf291b7c 599 Gene3D G3DSA:3.30.70.870 300 583 6.3E-130 T 11-10-2018 AMC99_00837 84086238f351dc634737e13abf291b7c 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 147 5.4E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_00837 84086238f351dc634737e13abf291b7c 599 SUPERFAMILY SSF50447 144 292 1.83E-26 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_00523 3f30326df141aa048c2d21b84ea5deb4 565 Pfam PF06974 Protein of unknown function (DUF1298) 315 467 1.2E-32 T 11-10-2018 IPR009721 O-acyltransferase WSD1, C-terminal GO:0004144 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AMC99_00523 3f30326df141aa048c2d21b84ea5deb4 565 SUPERFAMILY SSF52777 61 167 4.45E-7 T 11-10-2018 AMC99_00523 3f30326df141aa048c2d21b84ea5deb4 565 Pfam PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain 4 275 6.2E-63 T 11-10-2018 IPR004255 O-acyltransferase, WSD1, N-terminal GO:0004144|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AMC99_00523 3f30326df141aa048c2d21b84ea5deb4 565 TIGRFAM TIGR02946 acyl_WS_DGAT: acyltransferase, WS/DGAT/MGAT 4 471 9.9E-127 T 11-10-2018 IPR014292 Acyltransferase, WS/DGAT/MGAT GO:0016746|GO:0045017 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20 AMC99_01882 33031d9edb42d32ad19ade3f669ba739 102 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 99 1.4E-29 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMC99_01882 33031d9edb42d32ad19ade3f669ba739 102 SUPERFAMILY SSF55248 4 101 3.01E-30 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMC99_01882 33031d9edb42d32ad19ade3f669ba739 102 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 3 101 22.345 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMC99_01882 33031d9edb42d32ad19ade3f669ba739 102 Gene3D G3DSA:3.30.1360.20 1 101 4.3E-34 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Pfam PF06421 GTP-binding protein LepA C-terminus 495 600 3.8E-50 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 93 104 5.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 129 138 5.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 77 87 5.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 9 22 5.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 PRINTS PR00315 GTP-binding elongation factor signature 52 60 5.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 TIGRFAM TIGR01393 lepA: elongation factor 4 6 602 3.9E-292 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Pfam PF00679 Elongation factor G C-terminus 407 492 4.5E-19 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Gene3D G3DSA:3.30.70.870 289 370 1.6E-35 T 11-10-2018 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 SUPERFAMILY SSF54980 407 501 2.06E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 SUPERFAMILY SSF54980 295 373 9.35E-19 T 11-10-2018 IPR035647 EF-G domain III/V-like AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Gene3D G3DSA:2.40.30.10 189 288 4.7E-29 T 11-10-2018 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 3.3E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Pfam PF03144 Elongation factor Tu domain 2 208 278 1.1E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 179 4.9E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 SUPERFAMILY SSF52540 1 227 2.97E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Gene3D G3DSA:3.30.70.2570 487 561 1.2E-35 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Gene3D G3DSA:3.40.50.300 3 188 1.1E-73 T 11-10-2018 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Gene3D G3DSA:3.30.70.3380 371 486 1.0E-38 T 11-10-2018 AMC99_01371 526de5e64d207ea737ad21bd96e2cf62 605 Hamap MF_00071 Elongation factor 4 [lepA]. 1 605 303.281 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AMC99_00322 77e0ba2718812ac23efa26d772d296b1 632 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 102 630 3.1E-197 T 11-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 AMC99_00322 77e0ba2718812ac23efa26d772d296b1 632 Pfam PF00561 alpha/beta hydrolase fold 317 555 7.7E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_00322 77e0ba2718812ac23efa26d772d296b1 632 SUPERFAMILY SSF53474 275 561 1.06E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00322 77e0ba2718812ac23efa26d772d296b1 632 Gene3D G3DSA:3.40.50.1820 306 562 2.9E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00322 77e0ba2718812ac23efa26d772d296b1 632 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 145 313 2.6E-65 T 11-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AMC99_02218 f0957a718d15463eed31977852fb08ef 442 Pfam PF13520 Amino acid permease 20 419 2.9E-52 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_02218 f0957a718d15463eed31977852fb08ef 442 Gene3D G3DSA:1.20.1740.10 15 440 6.5E-72 T 11-10-2018 AMC99_02218 f0957a718d15463eed31977852fb08ef 442 PIRSF PIRSF006060 9 435 2.5E-58 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_00308 4b4b3997e07938b6ef60add53e81aa5b 203 Gene3D G3DSA:1.10.10.10 106 171 6.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00308 4b4b3997e07938b6ef60add53e81aa5b 203 Gene3D G3DSA:1.10.1740.10 3 85 2.9E-20 T 11-10-2018 AMC99_00308 4b4b3997e07938b6ef60add53e81aa5b 203 SUPERFAMILY SSF88659 109 167 6.98E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMC99_00308 4b4b3997e07938b6ef60add53e81aa5b 203 Pfam PF08281 Sigma-70, region 4 112 162 2.9E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_00308 4b4b3997e07938b6ef60add53e81aa5b 203 SUPERFAMILY SSF88946 11 99 4.4E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_00308 4b4b3997e07938b6ef60add53e81aa5b 203 Pfam PF04542 Sigma-70 region 2 20 83 9.5E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_00308 4b4b3997e07938b6ef60add53e81aa5b 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 165 2.2E-19 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMC99_02372 556fa2cc3e5948a154b1e1f38a74f54f 393 Gene3D G3DSA:3.40.47.10 133 387 1.1E-132 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_02372 556fa2cc3e5948a154b1e1f38a74f54f 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMC99_02372 556fa2cc3e5948a154b1e1f38a74f54f 393 Pfam PF00108 Thiolase, N-terminal domain 6 262 1.6E-63 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMC99_02372 556fa2cc3e5948a154b1e1f38a74f54f 393 Gene3D G3DSA:3.40.47.10 7 276 1.1E-132 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_02372 556fa2cc3e5948a154b1e1f38a74f54f 393 SUPERFAMILY SSF53901 271 392 1.19E-40 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_02372 556fa2cc3e5948a154b1e1f38a74f54f 393 PIRSF PIRSF000429 1 393 3.6E-113 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_02372 556fa2cc3e5948a154b1e1f38a74f54f 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 391 2.5E-120 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_02372 556fa2cc3e5948a154b1e1f38a74f54f 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.5E-42 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMC99_02372 556fa2cc3e5948a154b1e1f38a74f54f 393 SUPERFAMILY SSF53901 1 267 2.8E-65 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00824 dbd946792fcd005e469cda1417f8a998 257 Pfam PF12146 Serine aminopeptidase, S33 70 190 1.6E-6 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMC99_00824 dbd946792fcd005e469cda1417f8a998 257 Gene3D G3DSA:3.40.50.1820 68 257 1.5E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00824 dbd946792fcd005e469cda1417f8a998 257 SUPERFAMILY SSF53474 66 251 1.68E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02727 9919a448b968f1c50df28c42f5b567db 249 Pfam PF09356 Phage conserved hypothetical protein BR0599 164 240 7.7E-19 T 11-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal AMC99_00223 3e8588766d3b8c80da8bbf98c5d48579 139 Gene3D G3DSA:3.10.180.10 2 136 5.3E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00223 3e8588766d3b8c80da8bbf98c5d48579 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 127 6.2E-8 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_00223 3e8588766d3b8c80da8bbf98c5d48579 139 SUPERFAMILY SSF54593 2 128 6.18E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00949 321dd7232c1319adfbbc98fdef2254f0 334 Pfam PF01636 Phosphotransferase enzyme family 28 259 4.1E-22 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMC99_00949 321dd7232c1319adfbbc98fdef2254f0 334 Gene3D G3DSA:3.30.200.20 8 96 5.0E-26 T 11-10-2018 AMC99_00949 321dd7232c1319adfbbc98fdef2254f0 334 Gene3D G3DSA:3.90.1200.10 97 330 5.1E-68 T 11-10-2018 AMC99_00949 321dd7232c1319adfbbc98fdef2254f0 334 SUPERFAMILY SSF56112 14 316 1.44E-44 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMC99_00923 e57d09ed99ac5d2a11f752b8a5f1a041 718 Gene3D G3DSA:3.20.20.240 26 539 5.8E-239 T 11-10-2018 AMC99_00923 e57d09ed99ac5d2a11f752b8a5f1a041 718 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 577 702 4.2E-50 T 11-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMC99_00923 e57d09ed99ac5d2a11f752b8a5f1a041 718 SUPERFAMILY SSF52242 545 702 6.93E-53 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMC99_00923 e57d09ed99ac5d2a11f752b8a5f1a041 718 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 367 392 - T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMC99_00923 e57d09ed99ac5d2a11f752b8a5f1a041 718 Pfam PF01642 Methylmalonyl-CoA mutase 27 537 4.7E-235 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMC99_00923 e57d09ed99ac5d2a11f752b8a5f1a041 718 Gene3D G3DSA:3.40.50.280 544 704 6.1E-49 T 11-10-2018 AMC99_00923 e57d09ed99ac5d2a11f752b8a5f1a041 718 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 26 541 3.1E-261 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMC99_00923 e57d09ed99ac5d2a11f752b8a5f1a041 718 SUPERFAMILY SSF51703 7 539 2.15E-221 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 AMC99_00923 e57d09ed99ac5d2a11f752b8a5f1a041 718 Pfam PF02310 B12 binding domain 579 692 2.2E-13 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMC99_01443 e66f1bc9313c43403d88009f680e721b 259 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 12 248 1.1E-71 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMC99_01443 e66f1bc9313c43403d88009f680e721b 259 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 10 254 33.749 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMC99_01443 e66f1bc9313c43403d88009f680e721b 259 Pfam PF00290 Tryptophan synthase alpha chain 8 252 1.3E-86 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMC99_01443 e66f1bc9313c43403d88009f680e721b 259 SUPERFAMILY SSF51366 1 248 5.56E-80 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMC99_01443 e66f1bc9313c43403d88009f680e721b 259 Gene3D G3DSA:3.20.20.70 1 258 6.0E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01443 e66f1bc9313c43403d88009f680e721b 259 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 41 54 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 127 139 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 66 388 8.0E-95 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 65 81 8.3E-15 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 175 189 8.3E-15 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 221 234 8.3E-15 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 SUPERFAMILY SSF47413 5 48 9.38E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 Pfam PF00145 C-5 cytosine-specific DNA methylase 64 388 7.0E-82 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 Gene3D G3DSA:3.40.50.150 65 271 1.6E-69 T 11-10-2018 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 Gene3D G3DSA:1.10.260.40 2 64 2.0E-7 T 11-10-2018 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 372 390 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 SUPERFAMILY SSF53335 64 392 8.64E-85 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 Gene3D G3DSA:3.90.120.30 275 362 2.3E-35 T 11-10-2018 AMC99_00060 c929d12baa5d3d5f28cb0a1c97530f60 410 Pfam PF13560 Helix-turn-helix domain 5 48 1.1E-7 T 11-10-2018 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 Gene3D G3DSA:3.40.50.300 90 286 2.9E-117 T 11-10-2018 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 SUPERFAMILY SSF47446 328 429 2.75E-32 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 4.5E-70 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 SMART SM00962 101 297 5.0E-107 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 466 32.424 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 SMART SM00382 100 296 7.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01416 b8964bacb6b04c87358262564300b06e 493 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 5.2E-174 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 Pfam PF02978 Signal peptide binding domain 328 428 3.7E-29 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 SUPERFAMILY SSF52540 42 355 7.26E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01416 b8964bacb6b04c87358262564300b06e 493 Gene3D G3DSA:1.10.260.30 328 449 5.4E-37 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 Gene3D G3DSA:1.20.120.140 4 307 2.9E-117 T 11-10-2018 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 SMART SM00963 1 86 4.1E-36 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMC99_01416 b8964bacb6b04c87358262564300b06e 493 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 5.0E-20 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMC99_01905 207ea6e417a65d4e100af5841fc253c1 286 Gene3D G3DSA:1.10.1040.10 158 283 2.0E-39 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_01905 207ea6e417a65d4e100af5841fc253c1 286 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 1 157 5.7E-41 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMC99_01905 207ea6e417a65d4e100af5841fc253c1 286 PIRSF PIRSF000103 1 285 1.0E-66 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMC99_01905 207ea6e417a65d4e100af5841fc253c1 286 SUPERFAMILY SSF48179 158 282 4.19E-40 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_01905 207ea6e417a65d4e100af5841fc253c1 286 SUPERFAMILY SSF51735 1 158 5.25E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01905 207ea6e417a65d4e100af5841fc253c1 286 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 160 278 2.0E-34 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMC99_01905 207ea6e417a65d4e100af5841fc253c1 286 Gene3D G3DSA:3.40.50.720 1 157 5.9E-45 T 11-10-2018 AMC99_01174 c7ae5ea56014989ed2dcf49c68d77239 620 Gene3D G3DSA:1.20.1530.20 2 401 1.6E-70 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMC99_01174 c7ae5ea56014989ed2dcf49c68d77239 620 Pfam PF00999 Sodium/hydrogen exchanger family 8 392 1.4E-52 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMC99_01174 c7ae5ea56014989ed2dcf49c68d77239 620 SUPERFAMILY SSF51735 418 547 6.78E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01174 c7ae5ea56014989ed2dcf49c68d77239 620 Gene3D G3DSA:3.40.50.720 415 579 8.4E-32 T 11-10-2018 AMC99_01174 c7ae5ea56014989ed2dcf49c68d77239 620 Pfam PF02254 TrkA-N domain 420 533 1.1E-17 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 4.6E-73 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 Gene3D G3DSA:3.40.50.300 1 214 1.1E-68 T 11-10-2018 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 SUPERFAMILY SSF52540 3 213 3.24E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01524 874b61780def0cd603977b7951a08aeb 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 43.987 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 Pfam PF05191 Adenylate kinase, active site lid 127 163 2.5E-12 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 Pfam PF00406 Adenylate kinase 5 191 1.7E-50 T 11-10-2018 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.3E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 161 176 2.3E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 178 192 2.3E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.3E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMC99_01524 874b61780def0cd603977b7951a08aeb 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.3E-29 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AMC99_02534 6da79477fc64a93e69f1bff1e0123a3d 157 Gene3D G3DSA:3.10.129.10 16 146 3.1E-24 T 11-10-2018 AMC99_02534 6da79477fc64a93e69f1bff1e0123a3d 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 37 140 3.9E-13 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMC99_02534 6da79477fc64a93e69f1bff1e0123a3d 157 SUPERFAMILY SSF54637 19 143 9.35E-24 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_02534 6da79477fc64a93e69f1bff1e0123a3d 157 Pfam PF03061 Thioesterase superfamily 58 131 2.2E-11 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_01708 ea94e5df2d8ca3559aa792bdb1a81f7d 107 Pfam PF07345 Domain of unknown function (DUF1476) 1 102 7.5E-38 T 11-10-2018 IPR009945 Protein of unknown function DUF1476 AMC99_01708 ea94e5df2d8ca3559aa792bdb1a81f7d 107 Gene3D G3DSA:1.10.790.20 1 107 1.6E-35 T 11-10-2018 AMC99_01708 ea94e5df2d8ca3559aa792bdb1a81f7d 107 PIRSF PIRSF031780 1 106 5.6E-35 T 11-10-2018 IPR009945 Protein of unknown function DUF1476 AMC99_01909 edb4ea4d71a4e4d2723a78c3045297f2 144 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.1E-13 T 11-10-2018 AMC99_01909 edb4ea4d71a4e4d2723a78c3045297f2 144 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.1E-13 T 11-10-2018 AMC99_01909 edb4ea4d71a4e4d2723a78c3045297f2 144 Pfam PF02416 mttA/Hcf106 family 4 36 7.8E-6 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMC99_01909 edb4ea4d71a4e4d2723a78c3045297f2 144 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 69 1.3E-20 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AMC99_01909 edb4ea4d71a4e4d2723a78c3045297f2 144 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 136 13.894 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 1.2E-22 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 1.2E-22 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 1.2E-22 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 1.2E-22 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 Gene3D G3DSA:3.30.1360.30 280 423 3.8E-159 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 Pfam PF02938 GAD domain 316 407 5.1E-12 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 Gene3D G3DSA:3.30.930.10 121 586 3.8E-159 T 11-10-2018 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 SUPERFAMILY SSF55261 297 423 4.91E-34 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 Pfam PF01336 OB-fold nucleic acid binding domain 21 103 1.7E-14 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 561 2.3E-90 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 588 7.0E-185 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 SUPERFAMILY SSF50249 4 107 3.81E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 588 29.464 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 Gene3D G3DSA:2.40.50.140 1 106 2.9E-33 T 11-10-2018 AMC99_00724 97c1ae3b284c25d9408148bc8197bd02 598 SUPERFAMILY SSF55681 113 588 2.28E-91 T 11-10-2018 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-34 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-34 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-34 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 Gene3D G3DSA:1.10.1900.20 56 118 1.1E-27 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 Pfam PF00453 Ribosomal protein L20 3 108 3.8E-46 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 SUPERFAMILY SSF74731 2 117 1.96E-46 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.0E-46 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.231 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 Gene3D G3DSA:1.10.720.90 2 55 4.2E-24 T 11-10-2018 AMC99_02694 421bad2513ba988b1ae151ebf21b6bc0 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 1.0E-20 T 11-10-2018 AMC99_01473 2748b213196cebdea0c75b9e0d7035f3 159 SUPERFAMILY SSF54534 83 158 1.57E-18 T 11-10-2018 AMC99_01473 2748b213196cebdea0c75b9e0d7035f3 159 Hamap MF_00930 Transcription elongation factor GreB [greB]. 3 159 47.007 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 AMC99_01473 2748b213196cebdea0c75b9e0d7035f3 159 SUPERFAMILY SSF46557 7 79 4.84E-22 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMC99_01473 2748b213196cebdea0c75b9e0d7035f3 159 Gene3D G3DSA:3.10.50.30 81 159 3.6E-25 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AMC99_01473 2748b213196cebdea0c75b9e0d7035f3 159 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 8.5E-19 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMC99_01473 2748b213196cebdea0c75b9e0d7035f3 159 PIRSF PIRSF006092 2 159 7.5E-38 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMC99_01473 2748b213196cebdea0c75b9e0d7035f3 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 158 7.4E-21 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMC99_01473 2748b213196cebdea0c75b9e0d7035f3 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 24.859 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMC99_01473 2748b213196cebdea0c75b9e0d7035f3 159 Gene3D G3DSA:1.10.287.180 5 78 3.3E-21 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMC99_00530 eac39f99bc08cfc9edfa1e4f163e11cf 302 Gene3D G3DSA:3.10.129.10 142 297 6.7E-57 T 11-10-2018 AMC99_00530 eac39f99bc08cfc9edfa1e4f163e11cf 302 Gene3D G3DSA:3.10.129.10 10 123 8.4E-35 T 11-10-2018 AMC99_00530 eac39f99bc08cfc9edfa1e4f163e11cf 302 SUPERFAMILY SSF54637 127 296 7.47E-53 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00530 eac39f99bc08cfc9edfa1e4f163e11cf 302 SUPERFAMILY SSF54637 12 121 8.96E-32 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00530 eac39f99bc08cfc9edfa1e4f163e11cf 302 Pfam PF13622 Thioesterase-like superfamily 37 294 5.7E-57 T 11-10-2018 AMC99_00979 1d23224af6cd452c815a97962fd2208e 191 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 184 3.6E-32 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMC99_00979 1d23224af6cd452c815a97962fd2208e 191 Gene3D G3DSA:3.40.50.10420 3 189 3.1E-37 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMC99_00979 1d23224af6cd452c815a97962fd2208e 191 PIRSF PIRSF006806 1 187 1.2E-31 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMC99_00979 1d23224af6cd452c815a97962fd2208e 191 SUPERFAMILY SSF100950 5 188 1.53E-37 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMC99_00979 1d23224af6cd452c815a97962fd2208e 191 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 184 5.4E-27 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMC99_00855 6fa45acdc7c04fa147c947b483f0fbe3 418 Pfam PF04996 Succinylarginine dihydrolase 5 416 6.0E-167 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMC99_00855 6fa45acdc7c04fa147c947b483f0fbe3 418 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 2 417 46.486 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMC99_00855 6fa45acdc7c04fa147c947b483f0fbe3 418 Gene3D G3DSA:3.75.10.20 1 418 5.7E-163 T 11-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 AMC99_00855 6fa45acdc7c04fa147c947b483f0fbe3 418 SUPERFAMILY SSF55909 4 417 7.19E-169 T 11-10-2018 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 Gene3D G3DSA:3.30.70.260 726 807 8.0E-6 T 11-10-2018 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 SMART SM00471 486 633 1.0E-6 T 11-10-2018 IPR003607 HD/PDEase domain AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 Pfam PF08335 GlnD PII-uridylyltransferase 208 346 5.8E-36 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF55021 726 797 1.12E-10 T 11-10-2018 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 PIRSF PIRSF006288 25 916 8.3E-299 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 Gene3D G3DSA:1.10.3210.10 474 609 1.4E-8 T 11-10-2018 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF109604 453 579 1.13E-16 T 11-10-2018 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF81301 23 198 8.41E-31 T 11-10-2018 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF55021 836 909 4.16E-9 T 11-10-2018 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 77 907 1.3E-265 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 Pfam PF01966 HD domain 491 619 2.8E-11 T 11-10-2018 IPR006674 HD domain AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 921 274.807 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 AMC99_02326 bcb8a7cc94bcc3072e7469140fcf17cc 921 SUPERFAMILY SSF81593 228 336 4.87E-9 T 11-10-2018 AMC99_02085 e0e6e114d9ede5cde3bca95aa529826c 391 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 287 293 - T 11-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMC99_02085 e0e6e114d9ede5cde3bca95aa529826c 391 PIRSF PIRSF000138 17 391 4.2E-110 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMC99_02085 e0e6e114d9ede5cde3bca95aa529826c 391 SUPERFAMILY SSF51395 32 383 1.41E-81 T 11-10-2018 AMC99_02085 e0e6e114d9ede5cde3bca95aa529826c 391 Gene3D G3DSA:3.20.20.70 30 390 8.4E-115 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02085 e0e6e114d9ede5cde3bca95aa529826c 391 Pfam PF01070 FMN-dependent dehydrogenase 39 384 1.0E-107 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AMC99_00953 a93ad210c2305ab52bac281a51f8de54 106 Gene3D G3DSA:3.40.30.10 1 105 5.4E-35 T 11-10-2018 AMC99_00953 a93ad210c2305ab52bac281a51f8de54 106 PRINTS PR00421 Thioredoxin family signature 30 39 8.8E-8 T 11-10-2018 AMC99_00953 a93ad210c2305ab52bac281a51f8de54 106 PRINTS PR00421 Thioredoxin family signature 22 30 8.8E-8 T 11-10-2018 AMC99_00953 a93ad210c2305ab52bac281a51f8de54 106 PRINTS PR00421 Thioredoxin family signature 70 81 8.8E-8 T 11-10-2018 AMC99_00953 a93ad210c2305ab52bac281a51f8de54 106 SUPERFAMILY SSF52833 3 104 1.19E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00953 a93ad210c2305ab52bac281a51f8de54 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMC99_00953 a93ad210c2305ab52bac281a51f8de54 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 2.9E-34 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_00953 a93ad210c2305ab52bac281a51f8de54 106 PIRSF PIRSF000077 1 106 8.2E-40 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_00953 a93ad210c2305ab52bac281a51f8de54 106 Pfam PF00085 Thioredoxin 4 103 1.3E-34 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 SMART SM00487 9 191 5.3E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 8 806 1.8E-231 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 Pfam PF08482 ATP-dependent helicase C-terminal 666 795 3.9E-41 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 Gene3D G3DSA:1.20.120.1080 378 453 8.9E-9 T 11-10-2018 AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 PIRSF PIRSF005496 3 809 2.3E-259 T 11-10-2018 AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 122 131 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 Pfam PF04408 Helicase associated domain (HA2) 393 449 1.2E-7 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 SMART SM00490 231 332 2.3E-14 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 Pfam PF00270 DEAD/DEAH box helicase 23 164 1.4E-6 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 Gene3D G3DSA:3.40.50.300 1 184 7.9E-49 T 11-10-2018 AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 Pfam PF00271 Helicase conserved C-terminal domain 214 332 1.3E-10 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 SUPERFAMILY SSF52540 18 341 2.59E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 Gene3D G3DSA:3.40.50.300 185 347 3.1E-44 T 11-10-2018 AMC99_00668 27385bdf139b66bf802b3e4b38704649 813 SMART SM00847 392 482 5.7E-8 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 AMC99_02782 9e06bc27f3ed0490363baaaac48b3a62 219 Pfam PF01144 Coenzyme A transferase 12 206 3.1E-38 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMC99_02782 9e06bc27f3ed0490363baaaac48b3a62 219 Gene3D G3DSA:3.40.1080.10 6 218 1.0E-98 T 11-10-2018 AMC99_02782 9e06bc27f3ed0490363baaaac48b3a62 219 SUPERFAMILY SSF100950 8 216 3.45E-72 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMC99_02782 9e06bc27f3ed0490363baaaac48b3a62 219 SMART SM00882 11 208 2.8E-76 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMC99_02782 9e06bc27f3ed0490363baaaac48b3a62 219 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 8 215 2.0E-96 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 AMC99_00350 236c7719a2f33f627ebfc7bea8305554 437 PIRSF PIRSF000167 4 437 9.7E-138 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AMC99_00350 236c7719a2f33f627ebfc7bea8305554 437 SUPERFAMILY SSF102114 3 425 2.59E-94 T 11-10-2018 AMC99_00350 236c7719a2f33f627ebfc7bea8305554 437 Gene3D G3DSA:3.80.30.20 7 354 2.6E-89 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_00350 236c7719a2f33f627ebfc7bea8305554 437 Pfam PF04055 Radical SAM superfamily 48 218 2.6E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_00350 236c7719a2f33f627ebfc7bea8305554 437 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 11 437 2.4E-98 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 AMC99_00350 236c7719a2f33f627ebfc7bea8305554 437 Gene3D G3DSA:1.10.10.920 356 437 1.6E-5 T 11-10-2018 AMC99_00350 236c7719a2f33f627ebfc7bea8305554 437 SMART SM00729 43 263 1.7E-42 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 SUPERFAMILY SSF46689 215 282 4.45E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 Gene3D G3DSA:1.10.10.60 200 261 4.0E-12 T 11-10-2018 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 242 265 3.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 221 234 3.1E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 Gene3D G3DSA:1.10.357.10 61 196 4.3E-9 T 11-10-2018 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 Gene3D G3DSA:1.10.10.60 2 60 1.6E-11 T 11-10-2018 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 Pfam PF00440 Bacterial regulatory proteins, tetR family 222 267 2.7E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 3.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 SUPERFAMILY SSF48498 313 386 1.31E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 SUPERFAMILY SSF46689 6 84 1.89E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_00754 a72575c3c8433e185d8a83f827db61ae 398 Gene3D G3DSA:1.10.357.10 262 397 6.8E-13 T 11-10-2018 AMC99_01971 221c582049114e9f6c897be7c158fe65 279 SUPERFAMILY SSF52540 25 254 1.09E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01971 221c582049114e9f6c897be7c158fe65 279 Pfam PF00005 ABC transporter 42 192 4.0E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_01971 221c582049114e9f6c897be7c158fe65 279 SMART SM00382 50 249 1.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01971 221c582049114e9f6c897be7c158fe65 279 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_01971 221c582049114e9f6c897be7c158fe65 279 Gene3D G3DSA:3.40.50.300 26 277 2.7E-63 T 11-10-2018 AMC99_00296 18e700b798efb577961db53ab16292cc 221 Gene3D G3DSA:3.40.50.150 39 221 2.4E-56 T 11-10-2018 AMC99_00296 18e700b798efb577961db53ab16292cc 221 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 27 218 27.666 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AMC99_00296 18e700b798efb577961db53ab16292cc 221 PIRSF PIRSF005461 7 221 2.1E-70 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AMC99_00296 18e700b798efb577961db53ab16292cc 221 Pfam PF01728 FtsJ-like methyltransferase 43 217 3.0E-51 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMC99_00296 18e700b798efb577961db53ab16292cc 221 SUPERFAMILY SSF53335 17 219 5.39E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01192 1fa431dbec7c068091b8b68a090b93cb 338 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 15 330 8.1E-120 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AMC99_01192 1fa431dbec7c068091b8b68a090b93cb 338 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 106 124 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMC99_01192 1fa431dbec7c068091b8b68a090b93cb 338 Gene3D G3DSA:3.20.20.70 18 260 1.6E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01192 1fa431dbec7c068091b8b68a090b93cb 338 SUPERFAMILY SSF51395 23 330 3.66E-94 T 11-10-2018 AMC99_01192 1fa431dbec7c068091b8b68a090b93cb 338 PIRSF PIRSF006621 12 337 3.8E-110 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMC99_01192 1fa431dbec7c068091b8b68a090b93cb 338 Pfam PF01207 Dihydrouridine synthase (Dus) 25 326 3.0E-107 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMC99_01192 1fa431dbec7c068091b8b68a090b93cb 338 Gene3D G3DSA:1.10.1200.80 265 336 4.4E-10 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AMC99_00365 31551b284f7f695d94461ff581eb8489 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_00365 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 7.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00365 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00365 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 7.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00365 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 7.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00365 31551b284f7f695d94461ff581eb8489 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 7.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00365 31551b284f7f695d94461ff581eb8489 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 257 1.6E-30 T 11-10-2018 AMC99_00365 31551b284f7f695d94461ff581eb8489 264 Gene3D G3DSA:3.40.50.720 4 263 2.9E-50 T 11-10-2018 AMC99_00365 31551b284f7f695d94461ff581eb8489 264 SUPERFAMILY SSF51735 8 261 9.69E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02774 13ef104d4ea612e448231142489795ec 412 SUPERFAMILY SSF55681 7 325 7.28E-89 T 11-10-2018 AMC99_02774 13ef104d4ea612e448231142489795ec 412 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 401 1.7E-130 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AMC99_02774 13ef104d4ea612e448231142489795ec 412 Pfam PF13393 Histidyl-tRNA synthetase 11 319 2.5E-30 T 11-10-2018 AMC99_02774 13ef104d4ea612e448231142489795ec 412 Gene3D G3DSA:3.30.930.10 4 329 4.1E-104 T 11-10-2018 AMC99_02774 13ef104d4ea612e448231142489795ec 412 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 409 26.428 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AMC99_02774 13ef104d4ea612e448231142489795ec 412 PIRSF PIRSF001549 2 410 1.6E-94 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AMC99_00336 96cdc286fd8a966e1bd1129b48bba1fa 289 Pfam PF01925 Sulfite exporter TauE/SafE 26 283 8.6E-27 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMC99_02472 7cf60075706474415396c4fd896fdec7 405 Gene3D G3DSA:3.30.565.10 218 372 1.6E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02472 7cf60075706474415396c4fd896fdec7 405 SUPERFAMILY SSF55874 219 366 4.58E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02472 7cf60075706474415396c4fd896fdec7 405 Pfam PF06580 Histidine kinase 163 243 2.5E-24 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMC99_02472 7cf60075706474415396c4fd896fdec7 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 366 6.6E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02472 7cf60075706474415396c4fd896fdec7 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 295 309 6.6E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02472 7cf60075706474415396c4fd896fdec7 405 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 344 6.6E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02472 7cf60075706474415396c4fd896fdec7 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 368 5.3E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01680 f9797cb46e653856723409d1e2a22cf0 139 SUPERFAMILY SSF54637 11 129 6.56E-24 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_01680 f9797cb46e653856723409d1e2a22cf0 139 Pfam PF03061 Thioesterase superfamily 47 122 1.1E-6 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_01680 f9797cb46e653856723409d1e2a22cf0 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 129 2.1E-14 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMC99_01680 f9797cb46e653856723409d1e2a22cf0 139 Gene3D G3DSA:3.10.129.10 6 130 1.4E-27 T 11-10-2018 AMC99_01545 2dd8fd1b50c222ae7e87862694effa6a 207 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 1.4E-59 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AMC99_01545 2dd8fd1b50c222ae7e87862694effa6a 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 2.5E-63 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01545 2dd8fd1b50c222ae7e87862694effa6a 207 Gene3D G3DSA:3.40.1370.10 1 206 7.1E-72 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_01545 2dd8fd1b50c222ae7e87862694effa6a 207 SUPERFAMILY SSF52166 2 205 2.75E-65 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_01545 2dd8fd1b50c222ae7e87862694effa6a 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 28.078 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01678 49edfb422f269d6ac9b0d98c14c838e9 111 SUPERFAMILY SSF89919 2 100 2.35E-23 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AMC99_01678 49edfb422f269d6ac9b0d98c14c838e9 111 ProSitePatterns PS01319 Ribosome-binding factor A signature. 64 85 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AMC99_01678 49edfb422f269d6ac9b0d98c14c838e9 111 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 6 99 1.2E-16 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMC99_01678 49edfb422f269d6ac9b0d98c14c838e9 111 Pfam PF02033 Ribosome-binding factor A 2 98 2.2E-23 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMC99_01678 49edfb422f269d6ac9b0d98c14c838e9 111 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 1 82 1.0E-37 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMC99_01678 49edfb422f269d6ac9b0d98c14c838e9 111 Gene3D G3DSA:3.30.300.20 1 105 1.7E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMC99_01678 49edfb422f269d6ac9b0d98c14c838e9 111 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 98 20.584 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AMC99_00924 196d2824c68a259824b89ed73379ccd5 340 TIGRFAM TIGR00433 bioB: biotin synthase 16 317 2.6E-115 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMC99_00924 196d2824c68a259824b89ed73379ccd5 340 Hamap MF_01694 Biotin synthase [bioB]. 6 320 41.49 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMC99_00924 196d2824c68a259824b89ed73379ccd5 340 Pfam PF04055 Radical SAM superfamily 51 205 1.3E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_00924 196d2824c68a259824b89ed73379ccd5 340 Gene3D G3DSA:3.20.20.70 5 321 2.2E-120 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00924 196d2824c68a259824b89ed73379ccd5 340 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 221 317 4.3E-19 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMC99_00924 196d2824c68a259824b89ed73379ccd5 340 SMART SM00876 221 319 2.3E-40 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMC99_00924 196d2824c68a259824b89ed73379ccd5 340 SUPERFAMILY SSF102114 6 318 2.49E-87 T 11-10-2018 AMC99_00924 196d2824c68a259824b89ed73379ccd5 340 SMART SM00729 44 256 1.7E-43 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_00924 196d2824c68a259824b89ed73379ccd5 340 PIRSF PIRSF001619 1 325 1.4E-131 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AMC99_01995 ac505c73d2708998c3ce08c164d3c0ea 162 SUPERFAMILY SSF88713 30 159 2.78E-37 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_01995 ac505c73d2708998c3ce08c164d3c0ea 162 Pfam PF01522 Polysaccharide deacetylase 40 159 4.2E-28 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_01995 ac505c73d2708998c3ce08c164d3c0ea 162 Gene3D G3DSA:3.20.20.370 34 162 2.7E-35 T 11-10-2018 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 SUPERFAMILY SSF47323 357 519 1.85E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 486 5.2E-144 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 23 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 Gene3D G3DSA:2.170.220.10 116 228 1.2E-145 T 11-10-2018 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 Pfam PF09334 tRNA synthetases class I (M) 5 365 1.1E-104 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 513 44.769 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 Gene3D G3DSA:3.40.50.620 5 337 1.2E-145 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 SUPERFAMILY SSF52374 2 350 9.92E-108 T 11-10-2018 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 4.6E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 4.6E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 4.6E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 352 363 4.6E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 259 274 4.6E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 4.6E-32 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMC99_01181 6df3804987a2e221f76a46cbb61ca146 522 Gene3D G3DSA:1.10.730.10 342 519 1.9E-42 T 11-10-2018 AMC99_01617 24ba36dbf37dfa242af6fe39e4f8eff5 151 SUPERFAMILY SSF81301 6 150 1.37E-14 T 11-10-2018 AMC99_01617 24ba36dbf37dfa242af6fe39e4f8eff5 151 Gene3D G3DSA:3.30.460.40 2 150 1.8E-19 T 11-10-2018 AMC99_00712 1e330a5721268c6746efd3441b8e379d 391 SUPERFAMILY SSF102114 101 334 3.53E-50 T 11-10-2018 AMC99_00712 1e330a5721268c6746efd3441b8e379d 391 SMART SM00729 112 330 3.4E-52 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_00712 1e330a5721268c6746efd3441b8e379d 391 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 354 1.1E-88 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AMC99_00712 1e330a5721268c6746efd3441b8e379d 391 Gene3D G3DSA:3.40.50.12160 4 100 5.0E-12 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMC99_00712 1e330a5721268c6746efd3441b8e379d 391 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 371 1.4E-107 T 11-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 AMC99_00712 1e330a5721268c6746efd3441b8e379d 391 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 116 136 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMC99_00712 1e330a5721268c6746efd3441b8e379d 391 Pfam PF00919 Uncharacterized protein family UPF0004 6 85 2.2E-13 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AMC99_00712 1e330a5721268c6746efd3441b8e379d 391 Gene3D G3DSA:3.80.30.20 110 340 9.4E-69 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_00712 1e330a5721268c6746efd3441b8e379d 391 Pfam PF04055 Radical SAM superfamily 118 285 8.0E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_00588 63df58c3d700312f9c67cb4cc4999d15 249 Pfam PF01571 Aminomethyltransferase folate-binding domain 22 98 1.1E-4 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMC99_00588 63df58c3d700312f9c67cb4cc4999d15 249 Gene3D G3DSA:3.30.1360.120 118 231 2.7E-14 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMC99_00588 63df58c3d700312f9c67cb4cc4999d15 249 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 141 203 7.1E-20 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site AMC99_00588 63df58c3d700312f9c67cb4cc4999d15 249 SUPERFAMILY SSF103025 12 193 1.19E-38 T 11-10-2018 AMC99_00588 63df58c3d700312f9c67cb4cc4999d15 249 Gene3D G3DSA:3.30.70.1400 21 100 5.6E-21 T 11-10-2018 AMC99_01312 b3bcc54279d547424406b4642d5a07b7 270 Pfam PF08544 GHMP kinases C terminal 202 255 2.3E-7 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AMC99_01312 b3bcc54279d547424406b4642d5a07b7 270 SUPERFAMILY SSF54211 5 152 1.37E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_01312 b3bcc54279d547424406b4642d5a07b7 270 Gene3D G3DSA:3.30.70.890 156 268 2.1E-22 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMC99_01312 b3bcc54279d547424406b4642d5a07b7 270 PIRSF PIRSF010376 2 269 1.2E-63 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMC99_01312 b3bcc54279d547424406b4642d5a07b7 270 Pfam PF00288 GHMP kinases N terminal domain 84 141 6.8E-6 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMC99_01312 b3bcc54279d547424406b4642d5a07b7 270 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 268 26.527 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMC99_01312 b3bcc54279d547424406b4642d5a07b7 270 Gene3D G3DSA:3.30.230.10 1 153 5.5E-43 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_01312 b3bcc54279d547424406b4642d5a07b7 270 SUPERFAMILY SSF55060 156 264 1.4E-23 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AMC99_01312 b3bcc54279d547424406b4642d5a07b7 270 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 249 9.0E-43 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AMC99_01231 e3260001613b92c41bbbb71a52849114 390 Pfam PF00994 Probable molybdopterin binding domain 174 308 5.1E-24 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_01231 e3260001613b92c41bbbb71a52849114 390 Gene3D G3DSA:2.170.190.11 47 134 6.1E-110 T 11-10-2018 AMC99_01231 e3260001613b92c41bbbb71a52849114 390 SMART SM00852 173 310 8.1E-35 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_01231 e3260001613b92c41bbbb71a52849114 390 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 158 2.6E-37 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01231 e3260001613b92c41bbbb71a52849114 390 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 170 304 7.1E-26 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_01231 e3260001613b92c41bbbb71a52849114 390 Gene3D G3DSA:2.40.340.10 320 385 6.1E-110 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01231 e3260001613b92c41bbbb71a52849114 390 Pfam PF03454 MoeA C-terminal region (domain IV) 324 390 1.2E-12 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01231 e3260001613b92c41bbbb71a52849114 390 SUPERFAMILY SSF63882 3 168 5.89E-45 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01231 e3260001613b92c41bbbb71a52849114 390 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 245 279 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AMC99_01231 e3260001613b92c41bbbb71a52849114 390 SUPERFAMILY SSF53218 170 313 3.14E-38 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_01231 e3260001613b92c41bbbb71a52849114 390 Gene3D G3DSA:3.40.980.10 168 319 6.1E-110 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_01231 e3260001613b92c41bbbb71a52849114 390 SUPERFAMILY SSF63867 320 390 2.62E-13 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01231 e3260001613b92c41bbbb71a52849114 390 Gene3D G3DSA:3.90.105.10 25 167 6.1E-110 T 11-10-2018 AMC99_02361 ce0e8756d722a632ff1263a056f3563b 283 Gene3D G3DSA:3.10.129.10 56 282 1.4E-26 T 11-10-2018 AMC99_02361 ce0e8756d722a632ff1263a056f3563b 283 SUPERFAMILY SSF54637 71 148 7.46E-7 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_02361 ce0e8756d722a632ff1263a056f3563b 283 SUPERFAMILY SSF54637 171 282 3.56E-15 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_02361 ce0e8756d722a632ff1263a056f3563b 283 Pfam PF13452 N-terminal half of MaoC dehydratase 75 137 8.0E-7 T 11-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4 614 8.3E-205 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 269 283 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 Pfam PF13932 GidA associated domain 399 609 1.3E-52 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 2 617 37.07 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 SUPERFAMILY SSF51905 3 257 4.87E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 SMART SM01228 539 610 4.0E-30 T 11-10-2018 AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 Pfam PF01134 Glucose inhibited division protein A 5 395 4.6E-144 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 Gene3D G3DSA:1.10.150.570 563 615 9.5E-18 T 11-10-2018 AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 Gene3D G3DSA:3.50.50.60 1 218 1.4E-81 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02551 baa40bea153cbfc036fb581f7a87da9e 623 Gene3D G3DSA:3.50.50.60 291 454 3.4E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 SUPERFAMILY SSF47005 140 181 1.02E-5 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 Gene3D G3DSA:3.30.559.10 188 427 1.6E-79 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 197 429 4.3E-76 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 Gene3D G3DSA:4.10.320.10 134 184 1.0E-9 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 Gene3D G3DSA:2.40.50.100 3 82 2.1E-23 T 11-10-2018 AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 SUPERFAMILY SSF52777 191 429 1.11E-73 T 11-10-2018 AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 Pfam PF00364 Biotin-requiring enzyme 5 76 7.1E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 SUPERFAMILY SSF51230 3 95 3.26E-26 T 11-10-2018 IPR011053 Single hybrid motif AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 Pfam PF02817 e3 binding domain 144 177 1.9E-8 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMC99_00976 ca3b1e418269dbd9ca47c02993b1127f 431 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMC99_01906 8d9f9f029c78a111a97812fd7c792df3 552 Gene3D G3DSA:2.30.40.10 73 526 1.7E-129 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_01906 8d9f9f029c78a111a97812fd7c792df3 552 SUPERFAMILY SSF51556 81 508 1.84E-37 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_01906 8d9f9f029c78a111a97812fd7c792df3 552 Gene3D G3DSA:3.20.20.140 82 508 1.7E-129 T 11-10-2018 AMC99_01906 8d9f9f029c78a111a97812fd7c792df3 552 Gene3D G3DSA:3.10.310.70 100 220 1.7E-129 T 11-10-2018 AMC99_01906 8d9f9f029c78a111a97812fd7c792df3 552 Pfam PF07969 Amidohydrolase family 73 549 6.7E-101 T 11-10-2018 IPR013108 Amidohydrolase 3 AMC99_01906 8d9f9f029c78a111a97812fd7c792df3 552 SUPERFAMILY SSF51338 13 551 5.4E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 ProSitePatterns PS00801 Transketolase signature 1. 27 46 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 SUPERFAMILY SSF52518 2 374 7.41E-78 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 Gene3D G3DSA:3.40.50.970 311 484 2.8E-67 T 11-10-2018 AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 5 620 1.1E-242 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 275 1.4E-117 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 Gene3D G3DSA:3.40.50.920 489 621 2.6E-34 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 Pfam PF02780 Transketolase, C-terminal domain 489 612 1.1E-28 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 SUPERFAMILY SSF52518 310 498 2.36E-60 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 Pfam PF02779 Transketolase, pyrimidine binding domain 312 472 1.6E-39 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 SMART SM00861 312 477 3.5E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 SUPERFAMILY SSF52922 485 620 6.41E-35 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_02440 cd7c99e323d91b7831bb98c48de829b5 632 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 621 44.249 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SUPERFAMILY SSF47364 17 97 7.53E-15 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 39 301 1.1E-96 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SMART SM00382 107 258 4.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SMART SM00962 108 309 2.8E-107 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SMART SM00963 14 93 2.1E-13 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Pfam PF00448 SRP54-type protein, GTPase domain 108 306 1.5E-72 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 37 309 56.433 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Gene3D G3DSA:1.20.120.140 12 304 2.7E-105 T 11-10-2018 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Pfam PF02881 SRP54-type protein, helical bundle domain 23 88 6.1E-10 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 Gene3D G3DSA:3.40.50.300 108 297 2.7E-105 T 11-10-2018 AMC99_00711 3390d4bb9b5b6b9dbce37cc0dbc85f5e 311 SUPERFAMILY SSF52540 105 307 2.4E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01600 e780b5fd10463fc4f26ad38baa1977dc 362 SMART SM00267 192 361 3.2E-56 T 11-10-2018 IPR000160 GGDEF domain AMC99_01600 e780b5fd10463fc4f26ad38baa1977dc 362 SUPERFAMILY SSF55073 208 359 4.08E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_01600 e780b5fd10463fc4f26ad38baa1977dc 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 203 357 4.4E-41 T 11-10-2018 IPR000160 GGDEF domain AMC99_01600 e780b5fd10463fc4f26ad38baa1977dc 362 Gene3D G3DSA:3.30.450.20 64 116 1.5E-7 T 11-10-2018 AMC99_01600 e780b5fd10463fc4f26ad38baa1977dc 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 201 360 5.8E-45 T 11-10-2018 IPR000160 GGDEF domain AMC99_01600 e780b5fd10463fc4f26ad38baa1977dc 362 Gene3D G3DSA:3.30.70.270 190 361 6.4E-54 T 11-10-2018 AMC99_01600 e780b5fd10463fc4f26ad38baa1977dc 362 SUPERFAMILY SSF55785 53 176 2.18E-6 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_00446 9c5ad050af5d34a9e98ac9d9a1e2409e 263 Pfam PF00106 short chain dehydrogenase 7 185 9.7E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00446 9c5ad050af5d34a9e98ac9d9a1e2409e 263 Gene3D G3DSA:3.40.50.720 2 254 5.0E-41 T 11-10-2018 AMC99_00446 9c5ad050af5d34a9e98ac9d9a1e2409e 263 SUPERFAMILY SSF51735 4 234 1.26E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00446 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00446 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00446 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00446 9c5ad050af5d34a9e98ac9d9a1e2409e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01884 8bc5c475a68c2104f0abb3c089e3eac3 197 SMART SM00382 33 196 7.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01884 8bc5c475a68c2104f0abb3c089e3eac3 197 Pfam PF00005 ABC transporter 25 150 3.0E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_01884 8bc5c475a68c2104f0abb3c089e3eac3 197 Gene3D G3DSA:3.40.50.300 5 194 1.2E-37 T 11-10-2018 AMC99_01884 8bc5c475a68c2104f0abb3c089e3eac3 197 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 9 192 3.0E-50 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 AMC99_01884 8bc5c475a68c2104f0abb3c089e3eac3 197 SUPERFAMILY SSF52540 7 184 2.51E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01649 9f2b6d08a600c95953a71f8dd1410aa8 217 Hamap MF_00494 Probable transaldolase [tal]. 1 214 45.071 T 11-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMC99_01649 9f2b6d08a600c95953a71f8dd1410aa8 217 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 1.1E-89 T 11-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMC99_01649 9f2b6d08a600c95953a71f8dd1410aa8 217 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 210 5.9E-58 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMC99_01649 9f2b6d08a600c95953a71f8dd1410aa8 217 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AMC99_01649 9f2b6d08a600c95953a71f8dd1410aa8 217 Gene3D G3DSA:3.20.20.70 1 216 1.1E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01649 9f2b6d08a600c95953a71f8dd1410aa8 217 SUPERFAMILY SSF51569 1 214 1.26E-78 T 11-10-2018 AMC99_01787 49683672005ab488f609e42366b38f31 190 SUPERFAMILY SSF56420 2 187 3.01E-61 T 11-10-2018 IPR036821 Peptide deformylase superfamily AMC99_01787 49683672005ab488f609e42366b38f31 190 PIRSF PIRSF004749 1 190 1.1E-57 T 11-10-2018 IPR023635 Peptide deformylase AMC99_01787 49683672005ab488f609e42366b38f31 190 Pfam PF01327 Polypeptide deformylase 4 176 1.2E-54 T 11-10-2018 IPR023635 Peptide deformylase AMC99_01787 49683672005ab488f609e42366b38f31 190 Hamap MF_00163 Peptide deformylase [def]. 2 186 32.037 T 11-10-2018 IPR023635 Peptide deformylase AMC99_01787 49683672005ab488f609e42366b38f31 190 Gene3D G3DSA:3.90.45.10 1 190 3.1E-65 T 11-10-2018 IPR036821 Peptide deformylase superfamily AMC99_01787 49683672005ab488f609e42366b38f31 190 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 90 184 8.8E-32 T 11-10-2018 IPR023635 Peptide deformylase AMC99_01787 49683672005ab488f609e42366b38f31 190 PRINTS PR01576 Peptide deformylase signature 113 124 1.7E-35 T 11-10-2018 IPR023635 Peptide deformylase AMC99_01787 49683672005ab488f609e42366b38f31 190 PRINTS PR01576 Peptide deformylase signature 144 173 1.7E-35 T 11-10-2018 IPR023635 Peptide deformylase AMC99_01787 49683672005ab488f609e42366b38f31 190 PRINTS PR01576 Peptide deformylase signature 125 143 1.7E-35 T 11-10-2018 IPR023635 Peptide deformylase AMC99_01787 49683672005ab488f609e42366b38f31 190 PRINTS PR01576 Peptide deformylase signature 35 64 1.7E-35 T 11-10-2018 IPR023635 Peptide deformylase AMC99_01752 ac2822abb80991848830720f25868e4c 252 SUPERFAMILY SSF51735 5 251 7.43E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01752 ac2822abb80991848830720f25868e4c 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 250 3.8E-50 T 11-10-2018 AMC99_01752 ac2822abb80991848830720f25868e4c 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_01752 ac2822abb80991848830720f25868e4c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 180 0.0012 T 11-10-2018 AMC99_01752 ac2822abb80991848830720f25868e4c 252 Gene3D G3DSA:3.40.50.720 1 251 1.9E-65 T 11-10-2018 AMC99_01752 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01752 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01752 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01752 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01752 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01752 ac2822abb80991848830720f25868e4c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02147 74b300a8841406a4aaa8e019e7447ab9 300 SUPERFAMILY SSF103088 178 291 2.35E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_02147 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 274 294 4.4E-5 T 11-10-2018 AMC99_02147 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 4.4E-5 T 11-10-2018 AMC99_02147 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 4.4E-5 T 11-10-2018 AMC99_02147 74b300a8841406a4aaa8e019e7447ab9 300 Pfam PF00691 OmpA family 188 285 1.2E-17 T 11-10-2018 IPR006665 OmpA-like domain AMC99_02147 74b300a8841406a4aaa8e019e7447ab9 300 Gene3D G3DSA:3.30.1330.60 150 297 8.5E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_02147 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01021 OMPA domain signature 234 250 1.1E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_02147 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01021 OMPA domain signature 219 234 1.1E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_02147 74b300a8841406a4aaa8e019e7447ab9 300 PRINTS PR01021 OMPA domain signature 189 211 1.1E-10 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_00167 fe76bd6173031622d7b28aa6eac8a537 651 SUPERFAMILY SSF56235 76 227 4.32E-18 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_00167 fe76bd6173031622d7b28aa6eac8a537 651 Pfam PF00733 Asparagine synthase 249 625 1.8E-12 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 AMC99_00167 fe76bd6173031622d7b28aa6eac8a537 651 SUPERFAMILY SSF52402 223 601 3.95E-16 T 11-10-2018 AMC99_00167 fe76bd6173031622d7b28aa6eac8a537 651 Gene3D G3DSA:3.40.50.620 234 435 1.6E-8 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_00167 fe76bd6173031622d7b28aa6eac8a537 651 Gene3D G3DSA:3.40.50.620 480 604 4.9E-7 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_00167 fe76bd6173031622d7b28aa6eac8a537 651 Pfam PF13537 Glutamine amidotransferase domain 76 170 6.4E-8 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMC99_00167 fe76bd6173031622d7b28aa6eac8a537 651 Gene3D G3DSA:3.60.20.10 44 226 8.3E-14 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Gene3D G3DSA:3.30.450.20 281 402 1.1E-14 T 11-10-2018 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 SUPERFAMILY SSF55785 294 409 1.1E-14 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 SUPERFAMILY SSF47384 412 493 3.14E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 SMART SM00387 538 649 6.0E-42 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 539 647 5.7E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 SUPERFAMILY SSF47226 824 901 9.81E-10 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 SMART SM00448 672 791 4.1E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 627 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 646 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 588 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 602 1.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Pfam PF00072 Response regulator receiver domain 674 791 9.5E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Pfam PF05231 MASE1 2 276 3.9E-26 T 11-10-2018 IPR007895 MASE1 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Pfam PF01627 Hpt domain 826 905 7.5E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 SMART SM00388 427 492 2.5E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Gene3D G3DSA:3.40.50.2300 661 807 8.3E-35 T 11-10-2018 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Gene3D G3DSA:3.30.565.10 491 651 4.0E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Gene3D G3DSA:1.10.287.130 403 490 6.1E-26 T 11-10-2018 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 286 413 6.6E-10 T 11-10-2018 IPR000014 PAS domain AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Gene3D G3DSA:1.20.120.160 820 908 2.7E-9 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Pfam PF08448 PAS fold 296 408 8.6E-11 T 11-10-2018 IPR013656 PAS fold-4 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 SUPERFAMILY SSF55874 481 648 2.75E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 Pfam PF00512 His Kinase A (phospho-acceptor) domain 427 492 1.9E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 SUPERFAMILY SSF52172 670 803 6.83E-33 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02213 e4a0620a0814ed99ed1d44a4cd726f26 908 SMART SM00091 289 355 1.3E-6 T 11-10-2018 IPR000014 PAS domain AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 Gene3D G3DSA:1.10.287.40 1 106 2.4E-22 T 11-10-2018 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 PIRSF PIRSF001529 1 425 3.0E-164 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.6E-28 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 SUPERFAMILY SSF55681 118 417 2.86E-91 T 11-10-2018 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 6.8E-154 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 SUPERFAMILY SSF46589 1 114 5.23E-29 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 3.2E-33 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 Gene3D G3DSA:3.30.930.10 107 424 2.6E-109 T 11-10-2018 AMC99_02026 39651d3ccd25347aa7ae0f14cd32f7a6 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 39.384 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AMC99_01322 1b17fad83700cf21e24be4245f135261 1162 Pfam PF14579 Helix-hairpin-helix motif 800 892 2.1E-28 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_01322 1b17fad83700cf21e24be4245f135261 1162 Gene3D G3DSA:3.20.20.140 1 268 4.1E-73 T 11-10-2018 AMC99_01322 1b17fad83700cf21e24be4245f135261 1162 Gene3D G3DSA:1.10.10.1600 429 507 4.7E-25 T 11-10-2018 AMC99_01322 1b17fad83700cf21e24be4245f135261 1162 Pfam PF02811 PHP domain 9 172 4.0E-31 T 11-10-2018 IPR004013 PHP domain GO:0003824 AMC99_01322 1b17fad83700cf21e24be4245f135261 1162 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1027 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_01322 1b17fad83700cf21e24be4245f135261 1162 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 719 1.0E-168 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_01322 1b17fad83700cf21e24be4245f135261 1162 SMART SM00481 7 74 7.5E-15 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMC99_01322 1b17fad83700cf21e24be4245f135261 1162 SUPERFAMILY SSF89550 15 262 2.16E-6 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AMC99_01322 1b17fad83700cf21e24be4245f135261 1162 SUPERFAMILY SSF160975 828 867 9.02E-5 T 11-10-2018 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 4.1E-43 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 SUPERFAMILY SSF53098 3 155 6.07E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 2.8E-39 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 2.9E-30 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 2.9E-30 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 2.9E-30 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.9E-30 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 2.9E-30 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 Gene3D G3DSA:3.30.420.10 2 157 2.9E-44 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 148 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 AMC99_00002 a271129cde7b82cda0eeb5ffefe8ff32 161 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 154 41.604 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMC99_01289 106f692be328062fc97f4faa305282e9 307 SUPERFAMILY SSF52096 43 280 5.32E-37 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_01289 106f692be328062fc97f4faa305282e9 307 Gene3D G3DSA:3.90.226.10 20 246 1.6E-70 T 11-10-2018 AMC99_01289 106f692be328062fc97f4faa305282e9 307 Pfam PF00378 Enoyl-CoA hydratase/isomerase 86 226 1.8E-22 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_02122 f87fb690d48844381199a5e6ca95c183 472 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 318 452 3.1E-9 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMC99_02122 f87fb690d48844381199a5e6ca95c183 472 Pfam PF13440 Polysaccharide biosynthesis protein 22 313 9.7E-55 T 11-10-2018 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:3.20.20.60 546 886 3.1E-149 T 11-10-2018 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 SUPERFAMILY SSF51621 525 885 5.42E-131 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:3.30.1490.20 18 247 3.3E-101 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:3.30.470.20 248 357 8.3E-39 T 11-10-2018 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 SUPERFAMILY SSF56059 14 395 6.0E-143 T 11-10-2018 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 SUPERFAMILY SSF52009 401 526 6.15E-38 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 Pfam PF00391 PEP-utilising enzyme, mobile domain 436 517 4.3E-28 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:1.20.80.30 115 202 3.3E-101 T 11-10-2018 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 24 372 1.3E-61 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 2 885 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 464 475 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:1.10.189.10 361 543 1.3E-77 T 11-10-2018 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 PIRSF PIRSF000853 1 886 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 532 883 5.9E-87 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMC99_01116 58aa3f594bc557edbf0b8054789937de 886 Gene3D G3DSA:3.50.30.10 399 523 1.3E-77 T 11-10-2018 AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 Gene3D G3DSA:2.40.10.10 87 246 4.0E-12 T 11-10-2018 AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 Pfam PF03797 Autotransporter beta-domain 840 1100 1.5E-33 T 11-10-2018 IPR005546 Autotransporter beta-domain AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 Gene3D G3DSA:2.40.128.130 806 1123 1.9E-41 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 SMART SM00869 837 1112 1.6E-19 T 11-10-2018 IPR005546 Autotransporter beta-domain AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 347 358 - T 11-10-2018 IPR033116 Serine proteases, trypsin family, serine active site AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 SUPERFAMILY SSF50494 102 405 7.02E-21 T 11-10-2018 IPR009003 Peptidase S1, PA clan AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 133 138 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 SMART SM00020 71 395 4.2E-5 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 SUPERFAMILY SSF103515 788 1123 8.5E-32 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily AMC99_01987 dea044e66cf77eb166df81f18af62d07 1123 Pfam PF00089 Trypsin 103 245 1.0E-6 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 AMC99_00790 f26766f9f0b0db992fc42f604992ee12 991 Gene3D G3DSA:2.40.40.20 757 923 1.8E-21 T 11-10-2018 AMC99_00790 f26766f9f0b0db992fc42f604992ee12 991 Gene3D G3DSA:3.40.50.740 19 442 4.7E-80 T 11-10-2018 AMC99_00790 f26766f9f0b0db992fc42f604992ee12 991 SMART SM00926 21 75 6.7E-20 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00790 f26766f9f0b0db992fc42f604992ee12 991 Pfam PF00384 Molybdopterin oxidoreductase 79 594 2.1E-23 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00790 f26766f9f0b0db992fc42f604992ee12 991 SUPERFAMILY SSF50692 772 923 3.62E-29 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMC99_00790 f26766f9f0b0db992fc42f604992ee12 991 Pfam PF01568 Molydopterin dinucleotide binding domain 784 860 8.0E-10 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMC99_00790 f26766f9f0b0db992fc42f604992ee12 991 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 23 74 2.8E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00790 f26766f9f0b0db992fc42f604992ee12 991 Gene3D G3DSA:3.40.50.740 476 637 4.0E-11 T 11-10-2018 AMC99_00790 f26766f9f0b0db992fc42f604992ee12 991 SUPERFAMILY SSF53706 20 744 5.37E-130 T 11-10-2018 AMC99_00136 a492fcfc2500c010acacd114a5a149b2 162 Gene3D G3DSA:3.90.1170.40 2 151 6.4E-38 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMC99_00136 a492fcfc2500c010acacd114a5a149b2 162 SUPERFAMILY SSF54690 6 151 9.15E-37 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMC99_00136 a492fcfc2500c010acacd114a5a149b2 162 Pfam PF02391 MoaE protein 11 122 5.3E-27 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMC99_02034 eb1757ea655ab891371a535850552992 480 Gene3D G3DSA:3.30.360.10 171 466 9.6E-163 T 11-10-2018 AMC99_02034 eb1757ea655ab891371a535850552992 480 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 183 478 4.0E-114 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 5 479 81.695 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 161 189 6.5E-47 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 231 247 6.5E-47 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 137 150 6.5E-47 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 316 342 6.5E-47 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 213 230 6.5E-47 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 SUPERFAMILY SSF55347 171 478 6.87E-115 T 11-10-2018 AMC99_02034 eb1757ea655ab891371a535850552992 480 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 171 177 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 PIRSF PIRSF000110 2 480 7.7E-165 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 Gene3D G3DSA:3.40.50.720 9 427 9.6E-163 T 11-10-2018 AMC99_02034 eb1757ea655ab891371a535850552992 480 SUPERFAMILY SSF51735 7 184 2.36E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02034 eb1757ea655ab891371a535850552992 480 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 479 2.5E-167 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_02034 eb1757ea655ab891371a535850552992 480 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 181 4.8E-47 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 Pfam PF00072 Response regulator receiver domain 5 114 1.9E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 SUPERFAMILY SSF46689 349 461 2.83E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 Gene3D G3DSA:3.40.50.2300 1 130 1.5E-27 T 11-10-2018 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 Gene3D G3DSA:1.10.8.60 308 381 5.9E-19 T 11-10-2018 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 SMART SM00448 3 114 1.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 7.7E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 462 7.7E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 Gene3D G3DSA:1.10.10.60 382 462 1.8E-17 T 11-10-2018 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 SMART SM00382 157 300 1.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 Gene3D G3DSA:3.40.50.300 131 307 1.7E-65 T 11-10-2018 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 2.9E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 Pfam PF00158 Sigma-54 interaction domain 137 304 3.1E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 SUPERFAMILY SSF52172 4 181 5.98E-37 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01190 cc65e25e297d1abb22dd7fa3435a4d67 470 SUPERFAMILY SSF52540 137 379 1.24E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00743 31c3597d65304c9d7a1a680d80298c55 173 Gene3D G3DSA:1.20.120.450 1 172 4.9E-41 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMC99_00743 31c3597d65304c9d7a1a680d80298c55 173 SUPERFAMILY SSF109854 4 169 2.2E-43 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMC99_00743 31c3597d65304c9d7a1a680d80298c55 173 Pfam PF09351 Domain of unknown function (DUF1993) 5 166 1.7E-40 T 11-10-2018 IPR018531 Protein of unknown function DUF1993 AMC99_01324 ee861f4645f5834e1030dc73c34030d4 159 PRINTS PR01011 Glutathione peroxidase family signature 57 73 7.7E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMC99_01324 ee861f4645f5834e1030dc73c34030d4 159 PRINTS PR01011 Glutathione peroxidase family signature 123 132 7.7E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMC99_01324 ee861f4645f5834e1030dc73c34030d4 159 PRINTS PR01011 Glutathione peroxidase family signature 22 39 7.7E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMC99_01324 ee861f4645f5834e1030dc73c34030d4 159 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 11-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 AMC99_01324 ee861f4645f5834e1030dc73c34030d4 159 PIRSF PIRSF000303 1 159 2.1E-66 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMC99_01324 ee861f4645f5834e1030dc73c34030d4 159 Pfam PF00255 Glutathione peroxidase 5 111 1.0E-40 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 AMC99_01324 ee861f4645f5834e1030dc73c34030d4 159 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 AMC99_01324 ee861f4645f5834e1030dc73c34030d4 159 SUPERFAMILY SSF52833 3 159 2.6E-63 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01324 ee861f4645f5834e1030dc73c34030d4 159 Gene3D G3DSA:3.40.30.10 1 159 2.5E-71 T 11-10-2018 AMC99_00607 f03e6d6b8679e523b4498aa7a0c19c50 148 ProSitePatterns PS00552 MerR-type HTH domain signature. 10 32 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00607 f03e6d6b8679e523b4498aa7a0c19c50 148 Pfam PF13411 MerR HTH family regulatory protein 8 73 3.4E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00607 f03e6d6b8679e523b4498aa7a0c19c50 148 SMART SM00422 7 75 8.7E-24 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00607 f03e6d6b8679e523b4498aa7a0c19c50 148 Gene3D G3DSA:1.10.1660.10 1 130 1.8E-35 T 11-10-2018 AMC99_00607 f03e6d6b8679e523b4498aa7a0c19c50 148 SUPERFAMILY SSF46955 7 129 6.59E-28 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMC99_00607 f03e6d6b8679e523b4498aa7a0c19c50 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 2.6E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00607 f03e6d6b8679e523b4498aa7a0c19c50 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 2.6E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00607 f03e6d6b8679e523b4498aa7a0c19c50 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 2.6E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00607 f03e6d6b8679e523b4498aa7a0c19c50 148 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 7 144 3.3E-54 T 11-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 AMC99_02814 e53837f787d51278e76295082af26961 489 Gene3D G3DSA:2.40.33.10 82 178 3.0E-166 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 Pfam PF00224 Pyruvate kinase, barrel domain 14 344 2.4E-114 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 SUPERFAMILY SSF50800 82 176 9.24E-24 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMC99_02814 e53837f787d51278e76295082af26961 489 Gene3D G3DSA:3.40.1380.20 342 474 3.0E-166 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 SUPERFAMILY SSF51621 12 349 8.72E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMC99_02814 e53837f787d51278e76295082af26961 489 Pfam PF02887 Pyruvate kinase, alpha/beta domain 364 477 1.1E-28 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 275 299 9.6E-62 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 71 87 9.6E-62 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 250 274 9.6E-62 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 300 318 9.6E-62 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 196 210 9.6E-62 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 319 335 9.6E-62 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 PRINTS PR01050 Pyruvate kinase family signature 223 249 9.6E-62 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 Gene3D G3DSA:3.20.20.60 14 341 3.0E-166 T 11-10-2018 AMC99_02814 e53837f787d51278e76295082af26961 489 SUPERFAMILY SSF52935 329 479 6.41E-35 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_02814 e53837f787d51278e76295082af26961 489 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 14 478 5.5E-149 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 195 1.5E-38 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 SMART SM00382 343 495 1.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 Gene3D G3DSA:1.20.58.1480 115 239 5.0E-39 T 11-10-2018 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 PIRSF PIRSF001174 1 769 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 TIGRFAM TIGR00763 lon: endopeptidase La 6 765 3.4E-288 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 Gene3D G3DSA:3.40.50.300 309 485 4.2E-61 T 11-10-2018 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 Gene3D G3DSA:1.10.8.60 486 578 2.6E-30 T 11-10-2018 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 SMART SM00464 4 196 7.8E-68 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 Hamap MF_01973 Lon protease [lon]. 5 766 69.013 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 Gene3D G3DSA:3.30.230.10 580 766 3.7E-76 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 564 766 2.9E-92 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 SUPERFAMILY SSF88697 6 195 5.47E-45 T 11-10-2018 IPR015947 PUA-like superfamily AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 Gene3D G3DSA:2.30.130.40 1 110 1.7E-33 T 11-10-2018 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 SUPERFAMILY SSF52540 310 577 1.78E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 589 605 3.4E-54 T 11-10-2018 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 697 716 3.4E-54 T 11-10-2018 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 720 738 3.4E-54 T 11-10-2018 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 667 686 3.4E-54 T 11-10-2018 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 351 370 3.4E-54 T 11-10-2018 AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 SUPERFAMILY SSF54211 589 764 3.79E-55 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_00674 f0ed2e78f8ef7a8d670f452f78438e7d 798 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 347 483 5.7E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_00752 d85ea1a5c4d6acbe2119e547d61c5a22 822 SUPERFAMILY SSF56935 30 822 8.06E-106 T 11-10-2018 AMC99_00752 d85ea1a5c4d6acbe2119e547d61c5a22 822 Pfam PF00593 TonB dependent receptor 272 821 1.1E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_00752 d85ea1a5c4d6acbe2119e547d61c5a22 822 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 151 5.4E-8 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_00752 d85ea1a5c4d6acbe2119e547d61c5a22 822 Gene3D G3DSA:2.40.170.20 166 822 4.3E-91 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_00752 d85ea1a5c4d6acbe2119e547d61c5a22 822 Gene3D G3DSA:2.170.130.10 27 159 9.8E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 125 1.2E-37 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 Gene3D G3DSA:2.40.110.10 128 241 2.5E-42 T 11-10-2018 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 3.5E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 Gene3D G3DSA:1.20.140.10 242 388 7.2E-47 T 11-10-2018 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 Gene3D G3DSA:1.10.540.10 2 127 1.1E-46 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 SUPERFAMILY SSF56645 6 249 1.01E-83 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 PIRSF PIRSF016578 134 389 4.0E-21 T 11-10-2018 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 PIRSF PIRSF016578 12 112 0.097 T 11-10-2018 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 SUPERFAMILY SSF47203 235 386 6.77E-48 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_02318 48a18837ff591124eef775aa59a22b8f 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 3.3E-44 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_02190 4479337ea58f252e10c8ac7d226db00a 84 Gene3D G3DSA:1.10.1200.10 20 84 4.7E-7 T 11-10-2018 IPR036736 ACP-like superfamily AMC99_02190 4479337ea58f252e10c8ac7d226db00a 84 SUPERFAMILY SSF47336 5 83 5.52E-8 T 11-10-2018 IPR036736 ACP-like superfamily AMC99_01844 632e6dc814f46ac70f155b08bb701eed 155 PIRSF PIRSF030820 8 155 4.7E-39 T 11-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 AMC99_01844 632e6dc814f46ac70f155b08bb701eed 155 Pfam PF06073 Bacterial protein of unknown function (DUF934) 45 150 3.3E-37 T 11-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 ProSitePatterns PS01009 CRISP family signature 1. 133 143 - T 11-10-2018 IPR018244 Allergen V5/Tpx-1-related, conserved site GO:0005576 AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 Pfam PF00188 Cysteine-rich secretory protein family 38 163 5.8E-17 T 11-10-2018 IPR014044 CAP domain AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00838 Venom allergen 5 signature 53 71 7.5E-7 T 11-10-2018 IPR002413 Ves allergen AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00838 Venom allergen 5 signature 131 150 7.5E-7 T 11-10-2018 IPR002413 Ves allergen AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 SUPERFAMILY SSF55797 31 174 1.57E-35 T 11-10-2018 IPR035940 CAP superfamily AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00837 Allergen V5/Tpx-1 family signature 53 71 1.9E-12 T 11-10-2018 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00837 Allergen V5/Tpx-1 family signature 132 148 1.9E-12 T 11-10-2018 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 PRINTS PR00837 Allergen V5/Tpx-1 family signature 158 171 1.9E-12 T 11-10-2018 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 SMART SM00198 32 171 2.5E-32 T 11-10-2018 IPR014044 CAP domain AMC99_01149 7783ca230bd2f6a4d3daebb9d337635b 180 Gene3D G3DSA:3.40.33.10 29 176 1.6E-36 T 11-10-2018 IPR035940 CAP superfamily AMC99_01557 1f08779a3371c8066c97db4e35a1445f 720 SUPERFAMILY SSF90123 154 469 4.97E-54 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMC99_01557 1f08779a3371c8066c97db4e35a1445f 720 Gene3D G3DSA:3.40.50.300 476 719 5.8E-69 T 11-10-2018 AMC99_01557 1f08779a3371c8066c97db4e35a1445f 720 Pfam PF00664 ABC transporter transmembrane region 174 434 5.6E-23 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMC99_01557 1f08779a3371c8066c97db4e35a1445f 720 SUPERFAMILY SSF52540 478 712 4.61E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01557 1f08779a3371c8066c97db4e35a1445f 720 Gene3D G3DSA:3.90.70.10 11 138 2.0E-6 T 11-10-2018 AMC99_01557 1f08779a3371c8066c97db4e35a1445f 720 Gene3D G3DSA:1.20.1560.10 158 471 2.0E-52 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMC99_01557 1f08779a3371c8066c97db4e35a1445f 720 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 15 715 1.9E-217 T 11-10-2018 IPR017750 ATPase, type I secretion system AMC99_01557 1f08779a3371c8066c97db4e35a1445f 720 SMART SM00382 512 699 6.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01557 1f08779a3371c8066c97db4e35a1445f 720 Pfam PF00005 ABC transporter 503 651 2.1E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_00360 f2c4be1d39d7e414a9c60bf37ed73468 228 SMART SM00419 168 217 4.9E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00360 f2c4be1d39d7e414a9c60bf37ed73468 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 174 190 5.3E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00360 f2c4be1d39d7e414a9c60bf37ed73468 228 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 190 205 5.3E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00360 f2c4be1d39d7e414a9c60bf37ed73468 228 Pfam PF13545 Crp-like helix-turn-helix domain 149 223 5.0E-19 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00360 f2c4be1d39d7e414a9c60bf37ed73468 228 Gene3D G3DSA:2.60.120.10 30 145 7.5E-13 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_00360 f2c4be1d39d7e414a9c60bf37ed73468 228 Gene3D G3DSA:1.10.10.10 146 227 1.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00360 f2c4be1d39d7e414a9c60bf37ed73468 228 ProSitePatterns PS00042 Crp-type HTH domain signature. 176 199 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AMC99_00360 f2c4be1d39d7e414a9c60bf37ed73468 228 SUPERFAMILY SSF46785 146 225 1.26E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00360 f2c4be1d39d7e414a9c60bf37ed73468 228 SUPERFAMILY SSF51206 51 139 7.01E-7 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMC99_01172 39c95b40d84224024d92948aa82de52c 125 Pfam PF03061 Thioesterase superfamily 20 92 6.0E-9 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_01172 39c95b40d84224024d92948aa82de52c 125 SUPERFAMILY SSF54637 2 122 1.34E-26 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_01172 39c95b40d84224024d92948aa82de52c 125 Gene3D G3DSA:3.10.129.10 1 124 2.9E-22 T 11-10-2018 AMC99_00144 7c25e3e7f95ac7f2b833e63969485d5e 106 SUPERFAMILY SSF54292 5 103 8.03E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMC99_00144 7c25e3e7f95ac7f2b833e63969485d5e 106 Gene3D G3DSA:3.10.20.30 1 106 3.3E-34 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_00144 7c25e3e7f95ac7f2b833e63969485d5e 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 91 1.0E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 SUPERFAMILY SSF81593 752 889 6.67E-20 T 11-10-2018 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 Pfam PF08335 GlnD PII-uridylyltransferase 272 396 3.0E-33 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 Pfam PF08335 GlnD PII-uridylyltransferase 769 885 3.2E-4 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 Gene3D G3DSA:3.30.460.100 14 239 1.2E-47 T 11-10-2018 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 Gene3D G3DSA:3.30.460.100 509 748 1.5E-62 T 11-10-2018 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 Gene3D G3DSA:1.20.120.330 749 832 3.1E-11 T 11-10-2018 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 12 235 1.8E-42 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 499 740 8.8E-60 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 Gene3D G3DSA:1.20.120.330 243 400 5.0E-46 T 11-10-2018 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 SUPERFAMILY SSF81301 4 243 4.9E-51 T 11-10-2018 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 SUPERFAMILY SSF81301 472 749 3.6E-64 T 11-10-2018 AMC99_02403 19a63e76d5a3843475e737ac18984e2e 897 SUPERFAMILY SSF81593 246 396 5.1E-38 T 11-10-2018 AMC99_02035 b1522feae9a2ea9c41753434cb4d9a95 603 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 5 598 53.805 T 11-10-2018 AMC99_02035 b1522feae9a2ea9c41753434cb4d9a95 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 506 517 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_02035 b1522feae9a2ea9c41753434cb4d9a95 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 7 597 4.3E-267 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 AMC99_02035 b1522feae9a2ea9c41753434cb4d9a95 603 SUPERFAMILY SSF52016 420 596 2.43E-50 T 11-10-2018 AMC99_02035 b1522feae9a2ea9c41753434cb4d9a95 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 157 167 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_02035 b1522feae9a2ea9c41753434cb4d9a95 603 Pfam PF00920 Dehydratase family 69 593 5.7E-148 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_02035 b1522feae9a2ea9c41753434cb4d9a95 603 SUPERFAMILY SSF143975 5 419 1.96E-134 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_02035 b1522feae9a2ea9c41753434cb4d9a95 603 Gene3D G3DSA:3.50.30.80 420 566 2.3E-44 T 11-10-2018 AMC99_02610 b6d72815bc8b2b9fd42357b3c7618d90 370 Pfam PF13579 Glycosyl transferase 4-like domain 20 188 1.5E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMC99_02610 b6d72815bc8b2b9fd42357b3c7618d90 370 Pfam PF00534 Glycosyl transferases group 1 204 329 3.5E-9 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMC99_02610 b6d72815bc8b2b9fd42357b3c7618d90 370 SUPERFAMILY SSF53756 19 347 5.34E-34 T 11-10-2018 AMC99_02610 b6d72815bc8b2b9fd42357b3c7618d90 370 Gene3D G3DSA:3.40.50.2000 202 340 9.3E-18 T 11-10-2018 AMC99_02610 b6d72815bc8b2b9fd42357b3c7618d90 370 Gene3D G3DSA:3.40.50.2000 12 201 5.7E-8 T 11-10-2018 AMC99_01780 7b97bb0c281e72b3b38e478856d59c57 291 Pfam PF03668 P-loop ATPase protein family 1 280 7.8E-82 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AMC99_01780 7b97bb0c281e72b3b38e478856d59c57 291 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 280 36.938 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AMC99_01780 7b97bb0c281e72b3b38e478856d59c57 291 SUPERFAMILY SSF52540 2 152 2.23E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01780 7b97bb0c281e72b3b38e478856d59c57 291 PIRSF PIRSF005052 1 283 2.9E-92 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 AMC99_01130 c878c37ecdb850d8cc98b772e087b696 414 SUPERFAMILY SSF53092 33 181 2.44E-27 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMC99_01130 c878c37ecdb850d8cc98b772e087b696 414 Gene3D G3DSA:3.90.230.10 182 414 7.9E-64 T 11-10-2018 AMC99_01130 c878c37ecdb850d8cc98b772e087b696 414 Gene3D G3DSA:3.40.350.10 26 181 5.6E-45 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMC99_01130 c878c37ecdb850d8cc98b772e087b696 414 SUPERFAMILY SSF55920 185 404 1.05E-59 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AMC99_01130 c878c37ecdb850d8cc98b772e087b696 414 Pfam PF00557 Metallopeptidase family M24 191 396 1.0E-47 T 11-10-2018 IPR000994 Peptidase M24 AMC99_01130 c878c37ecdb850d8cc98b772e087b696 414 Pfam PF01321 Creatinase/Prolidase N-terminal domain 49 183 2.1E-20 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AMC99_01022 f41fdc687304bdbc96cc6c75cf23fd97 222 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 7 215 1.6E-67 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMC99_01022 f41fdc687304bdbc96cc6c75cf23fd97 222 Pfam PF01895 PhoU domain 125 207 2.0E-22 T 11-10-2018 IPR026022 PhoU domain AMC99_01022 f41fdc687304bdbc96cc6c75cf23fd97 222 Pfam PF01895 PhoU domain 21 108 4.2E-23 T 11-10-2018 IPR026022 PhoU domain AMC99_01022 f41fdc687304bdbc96cc6c75cf23fd97 222 Gene3D G3DSA:1.20.58.220 115 222 9.3E-38 T 11-10-2018 IPR038078 PhoU-like domain superfamily AMC99_01022 f41fdc687304bdbc96cc6c75cf23fd97 222 SUPERFAMILY SSF109755 7 217 3.14E-69 T 11-10-2018 AMC99_01022 f41fdc687304bdbc96cc6c75cf23fd97 222 Gene3D G3DSA:1.20.58.220 1 114 6.9E-35 T 11-10-2018 IPR038078 PhoU-like domain superfamily AMC99_01022 f41fdc687304bdbc96cc6c75cf23fd97 222 PIRSF PIRSF003107 2 221 1.2E-65 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00145 Argininosuccinate lyase family signature 242 266 3.8E-65 T 11-10-2018 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00145 Argininosuccinate lyase family signature 321 340 3.8E-65 T 11-10-2018 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00145 Argininosuccinate lyase family signature 112 134 3.8E-65 T 11-10-2018 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00145 Argininosuccinate lyase family signature 153 173 3.8E-65 T 11-10-2018 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00145 Argininosuccinate lyase family signature 204 220 3.8E-65 T 11-10-2018 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00145 Argininosuccinate lyase family signature 286 302 3.8E-65 T 11-10-2018 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 ProSitePatterns PS00163 Fumarate lyases signature. 286 295 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 TIGRFAM TIGR00838 argH: argininosuccinate lyase 14 466 3.5E-174 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 Gene3D G3DSA:1.20.200.10 130 460 2.3E-180 T 11-10-2018 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 Pfam PF00206 Lyase 17 311 3.2E-73 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 Hamap MF_00006 Argininosuccinate lyase [argH]. 13 465 41.668 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 Gene3D G3DSA:1.10.40.30 371 444 2.3E-180 T 11-10-2018 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00149 Fumarate lyase superfamily signature 242 269 6.7E-29 T 11-10-2018 IPR000362 Fumarate lyase family AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00149 Fumarate lyase superfamily signature 286 302 6.7E-29 T 11-10-2018 IPR000362 Fumarate lyase family AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00149 Fumarate lyase superfamily signature 158 176 6.7E-29 T 11-10-2018 IPR000362 Fumarate lyase family AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 PRINTS PR00149 Fumarate lyase superfamily signature 113 131 6.7E-29 T 11-10-2018 IPR000362 Fumarate lyase family AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 Pfam PF14698 Argininosuccinate lyase C-terminal 375 443 1.7E-22 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 Gene3D G3DSA:1.10.275.10 36 240 2.3E-180 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AMC99_01797 181ccb04c56b11f929b1eef67e668c56 471 SUPERFAMILY SSF48557 17 467 5.34E-146 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMC99_01445 c201409640349c539808a9d3cb1dbc22 431 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 425 9.7E-92 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AMC99_01445 c201409640349c539808a9d3cb1dbc22 431 PIRSF PIRSF001563 11 430 6.1E-90 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AMC99_01445 c201409640349c539808a9d3cb1dbc22 431 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AMC99_01445 c201409640349c539808a9d3cb1dbc22 431 SUPERFAMILY SSF53244 306 427 9.84E-19 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01445 c201409640349c539808a9d3cb1dbc22 431 SUPERFAMILY SSF53623 26 303 5.49E-74 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01445 c201409640349c539808a9d3cb1dbc22 431 Gene3D G3DSA:3.90.190.20 305 427 9.9E-16 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01445 c201409640349c539808a9d3cb1dbc22 431 Gene3D G3DSA:3.40.1190.10 3 304 1.5E-79 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_00224 088239eba6e8333bfa70ec9b08e9da93 221 SUPERFAMILY SSF52833 2 89 6.73E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00224 088239eba6e8333bfa70ec9b08e9da93 221 Gene3D G3DSA:1.20.1050.10 88 198 1.8E-52 T 11-10-2018 AMC99_00224 088239eba6e8333bfa70ec9b08e9da93 221 Pfam PF13409 Glutathione S-transferase, N-terminal domain 11 79 1.3E-9 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_00224 088239eba6e8333bfa70ec9b08e9da93 221 SUPERFAMILY SSF47616 84 203 1.78E-15 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_00224 088239eba6e8333bfa70ec9b08e9da93 221 Gene3D G3DSA:3.40.30.10 5 203 1.8E-52 T 11-10-2018 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 Gene3D G3DSA:3.40.50.300 16 265 2.4E-89 T 11-10-2018 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 Pfam PF00009 Elongation factor Tu GTP binding domain 7 267 7.2E-52 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 SUPERFAMILY SSF50447 251 383 7.83E-25 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 SUPERFAMILY SSF54980 383 453 1.76E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 241 263 2.8E-11 T 11-10-2018 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 126 149 2.8E-11 T 11-10-2018 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 Gene3D G3DSA:3.30.70.3280 380 518 1.7E-44 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 516 46.384 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 162 4.9E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 517 1.7E-179 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 Pfam PF16658 Class II release factor RF3, C-terminal domain 377 502 1.7E-42 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 104 115 3.9E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 60 68 3.9E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 10 23 3.9E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 88 98 3.9E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 PRINTS PR00315 GTP-binding elongation factor signature 140 149 3.9E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 Gene3D G3DSA:3.40.50.300 9 369 2.4E-89 T 11-10-2018 AMC99_02702 4d0432e5e4a9a62b807c37b56aad4d78 518 SUPERFAMILY SSF52540 6 267 4.86E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01521 c65d907013944448a79282b950fb7f15 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 9 129 32.377 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMC99_01521 c65d907013944448a79282b950fb7f15 129 Pfam PF00411 Ribosomal protein S11 19 128 9.9E-49 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMC99_01521 c65d907013944448a79282b950fb7f15 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site AMC99_01521 c65d907013944448a79282b950fb7f15 129 SUPERFAMILY SSF53137 14 129 1.37E-47 T 11-10-2018 AMC99_01521 c65d907013944448a79282b950fb7f15 129 PIRSF PIRSF002131 1 129 5.1E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMC99_01521 c65d907013944448a79282b950fb7f15 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.8E-56 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01521 c65d907013944448a79282b950fb7f15 129 Gene3D G3DSA:3.30.420.80 1 129 9.7E-54 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_00630 7c426b93023807fe978fa039760aba95 193 Gene3D G3DSA:2.30.110.10 1 193 2.0E-38 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMC99_00630 7c426b93023807fe978fa039760aba95 193 SUPERFAMILY SSF50475 4 193 4.86E-28 T 11-10-2018 AMC99_00630 7c426b93023807fe978fa039760aba95 193 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 28 99 1.0E-10 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_02560 6128990b078f9224c221548eacfc7e7e 493 SUPERFAMILY SSF50952 73 452 3.79E-35 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMC99_02560 6128990b078f9224c221548eacfc7e7e 493 Pfam PF07995 Glucose / Sorbosone dehydrogenase 255 363 8.0E-9 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMC99_02560 6128990b078f9224c221548eacfc7e7e 493 Gene3D G3DSA:2.120.10.30 182 384 3.5E-10 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMC99_01637 cd67c6d08167b857f8cd2f829792410d 226 Gene3D G3DSA:3.60.15.10 14 222 1.4E-72 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_01637 cd67c6d08167b857f8cd2f829792410d 226 SUPERFAMILY SSF56281 13 220 1.21E-55 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_01637 cd67c6d08167b857f8cd2f829792410d 226 Pfam PF00753 Metallo-beta-lactamase superfamily 22 204 2.4E-29 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_01637 cd67c6d08167b857f8cd2f829792410d 226 SMART SM00849 25 204 1.5E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 Gene3D G3DSA:2.130.10.10 784 1067 4.7E-7 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 SUPERFAMILY SSF81901 1796 1933 1.57E-12 T 11-10-2018 AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 SUPERFAMILY SSF51004 947 1196 7.06E-6 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 SUPERFAMILY SSF50998 792 989 2.35E-12 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 SMART SM00671 1852 1887 0.024 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 SMART SM00671 1816 1851 49.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 Gene3D G3DSA:1.25.40.10 1781 1938 2.4E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 Pfam PF13271 Domain of unknown function (DUF4062) 5 95 1.5E-4 T 11-10-2018 IPR025139 Domain of unknown function DUF4062 AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 Gene3D G3DSA:3.40.50.300 273 435 2.2E-5 T 11-10-2018 AMC99_02113 766bc86fe5bcf052412e10640c38d251 1938 SUPERFAMILY SSF52540 302 480 2.99E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00997 4c3abc69208bc21f5e12c5e5eee9f4cf 806 Gene3D G3DSA:2.30.30.60 641 690 9.6E-13 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMC99_00997 4c3abc69208bc21f5e12c5e5eee9f4cf 806 SUPERFAMILY SSF50182 626 691 2.62E-17 T 11-10-2018 IPR010920 LSM domain superfamily AMC99_00997 4c3abc69208bc21f5e12c5e5eee9f4cf 806 Pfam PF00924 Mechanosensitive ion channel 583 782 1.4E-52 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_00997 4c3abc69208bc21f5e12c5e5eee9f4cf 806 SUPERFAMILY SSF82689 696 791 1.83E-28 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_00997 4c3abc69208bc21f5e12c5e5eee9f4cf 806 Gene3D G3DSA:3.30.70.100 695 786 1.3E-27 T 11-10-2018 AMC99_00997 4c3abc69208bc21f5e12c5e5eee9f4cf 806 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 655 689 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 AMC99_00997 4c3abc69208bc21f5e12c5e5eee9f4cf 806 SUPERFAMILY SSF82861 541 624 3.01E-11 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMC99_02371 c6528611590184f1a1ffe44e3feb39a1 207 Pfam PF13548 Domain of unknown function (DUF4126) 9 180 5.0E-48 T 11-10-2018 IPR025196 Domain of unknown function DUF4126 AMC99_02735 369e2d2b52648f8ffd74d15e3e939942 80 Gene3D G3DSA:1.10.1200.10 6 80 5.6E-13 T 11-10-2018 IPR036736 ACP-like superfamily AMC99_02735 369e2d2b52648f8ffd74d15e3e939942 80 SUPERFAMILY SSF47336 2 78 4.84E-12 T 11-10-2018 IPR036736 ACP-like superfamily AMC99_02735 369e2d2b52648f8ffd74d15e3e939942 80 Pfam PF00550 Phosphopantetheine attachment site 21 74 1.3E-9 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMC99_01288 77a05ce37637c170469bcd952950d7c8 232 Gene3D G3DSA:2.60.120.10 11 134 1.5E-77 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_01288 77a05ce37637c170469bcd952950d7c8 232 PIRSF PIRSF006232 3 232 2.1E-47 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AMC99_01288 77a05ce37637c170469bcd952950d7c8 232 Pfam PF02678 Pirin 14 118 1.8E-34 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AMC99_01288 77a05ce37637c170469bcd952950d7c8 232 SUPERFAMILY SSF51182 1 231 6.0E-69 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMC99_01288 77a05ce37637c170469bcd952950d7c8 232 Gene3D G3DSA:2.60.120.10 10 230 1.5E-77 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 SUPERFAMILY SSF52540 85 368 1.86E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 Hamap MF_01347 ATP synthase subunit beta [atpB]. 10 481 57.221 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 SUPERFAMILY SSF50615 9 82 1.15E-23 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 Gene3D G3DSA:1.10.1140.10 366 485 7.4E-61 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 12 481 1.3E-251 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 PIRSF PIRSF039072 1 485 1.3E-281 T 11-10-2018 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 15 81 4.4E-22 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 354 363 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 363 3.2E-61 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 Gene3D G3DSA:3.40.50.300 84 365 2.6E-115 T 11-10-2018 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 Gene3D G3DSA:2.40.10.170 2 83 1.4E-32 T 11-10-2018 AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 SMART SM00382 150 426 5.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01664 e588d7e0a0dcb42e4285327a05fe0490 485 SUPERFAMILY SSF47917 366 482 6.02E-54 T 11-10-2018 AMC99_02124 c250468e408af9e1230e1978a4b9dd24 609 SMART SM00382 387 573 5.9E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02124 c250468e408af9e1230e1978a4b9dd24 609 Pfam PF00664 ABC transporter transmembrane region 41 316 5.7E-38 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMC99_02124 c250468e408af9e1230e1978a4b9dd24 609 Gene3D G3DSA:3.40.50.300 352 609 4.4E-95 T 11-10-2018 AMC99_02124 c250468e408af9e1230e1978a4b9dd24 609 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_02124 c250468e408af9e1230e1978a4b9dd24 609 Gene3D G3DSA:1.20.1560.10 4 350 2.0E-129 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMC99_02124 c250468e408af9e1230e1978a4b9dd24 609 Pfam PF00005 ABC transporter 378 527 4.4E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_02124 c250468e408af9e1230e1978a4b9dd24 609 SUPERFAMILY SSF52540 352 597 4.46E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02124 c250468e408af9e1230e1978a4b9dd24 609 SUPERFAMILY SSF90123 20 350 7.72E-61 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMC99_01968 f9dba4f37b40eec5956c0fbd64ef0dd4 234 SUPERFAMILY SSF160909 2 227 7.19E-69 T 11-10-2018 AMC99_01968 f9dba4f37b40eec5956c0fbd64ef0dd4 234 Gene3D G3DSA:1.10.3580.10 64 232 3.1E-50 T 11-10-2018 IPR023335 ATP12 orthogonal Bundle domain superfamily AMC99_01968 f9dba4f37b40eec5956c0fbd64ef0dd4 234 Pfam PF07542 ATP12 chaperone protein 2 119 8.3E-31 T 11-10-2018 IPR011419 ATP12, ATP synthase F1-assembly protein GO:0043461 AMC99_01968 f9dba4f37b40eec5956c0fbd64ef0dd4 234 Gene3D G3DSA:3.30.2180.30 1 60 1.4E-22 T 11-10-2018 AMC99_01639 a3478054d082e869327860b38ca331b3 230 Gene3D G3DSA:2.10.109.10 110 227 1.4E-11 T 11-10-2018 AMC99_01639 a3478054d082e869327860b38ca331b3 230 Pfam PF00717 Peptidase S24-like 148 212 3.9E-12 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_01639 a3478054d082e869327860b38ca331b3 230 SUPERFAMILY SSF51306 102 225 1.31E-22 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 Gene3D G3DSA:2.40.50.100 1 102 1.0E-22 T 11-10-2018 AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 Gene3D G3DSA:4.10.320.10 115 157 1.0E-14 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 SUPERFAMILY SSF51230 1 90 4.35E-26 T 11-10-2018 IPR011053 Single hybrid motif AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 SUPERFAMILY SSF52777 184 413 2.76E-88 T 11-10-2018 AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 SUPERFAMILY SSF47005 107 152 5.75E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 413 7.4E-169 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 Pfam PF02817 e3 binding domain 115 147 6.5E-13 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 183 411 9.1E-81 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 Pfam PF00364 Biotin-requiring enzyme 4 75 5.7E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMC99_01508 068a2a98cb9e4a6c164c7415e72bf98c 414 Gene3D G3DSA:3.30.559.10 182 414 1.3E-94 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMC99_02650 51a22e2213c37bad5d83d7ce280caa29 355 SUPERFAMILY SSF56059 102 298 3.54E-56 T 11-10-2018 AMC99_02650 51a22e2213c37bad5d83d7ce280caa29 355 Gene3D G3DSA:3.30.1490.20 107 168 2.1E-19 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMC99_02650 51a22e2213c37bad5d83d7ce280caa29 355 SUPERFAMILY SSF51246 304 352 3.14E-12 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMC99_02650 51a22e2213c37bad5d83d7ce280caa29 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 7 350 1.5E-100 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMC99_02650 51a22e2213c37bad5d83d7ce280caa29 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 7 354 38.366 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AMC99_02650 51a22e2213c37bad5d83d7ce280caa29 355 Gene3D G3DSA:3.40.50.20 1 106 2.1E-33 T 11-10-2018 AMC99_02650 51a22e2213c37bad5d83d7ce280caa29 355 SUPERFAMILY SSF52440 4 98 2.88E-22 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMC99_02650 51a22e2213c37bad5d83d7ce280caa29 355 Pfam PF02222 ATP-grasp domain 118 278 3.7E-44 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AMC99_02650 51a22e2213c37bad5d83d7ce280caa29 355 Gene3D G3DSA:3.30.470.20 169 355 8.7E-67 T 11-10-2018 AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 SMART SM00100 15 133 3.7E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 Pfam PF00027 Cyclic nucleotide-binding domain 34 117 5.2E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 Pfam PF13545 Crp-like helix-turn-helix domain 150 225 6.0E-19 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 3.1E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 3.1E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 SUPERFAMILY SSF46785 147 227 2.66E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 Gene3D G3DSA:1.10.10.10 147 231 2.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 ProSitePatterns PS00042 Crp-type HTH domain signature. 178 201 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 SMART SM00419 170 219 2.3E-14 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 SUPERFAMILY SSF51206 8 142 1.57E-25 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMC99_00580 6741753a499240fc78dbbd03c1c2d904 232 Gene3D G3DSA:2.60.120.10 7 144 1.7E-24 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_00146 e8233b75e5b41bab718659eaf0e8215c 108 Pfam PF13545 Crp-like helix-turn-helix domain 56 103 1.1E-9 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00146 e8233b75e5b41bab718659eaf0e8215c 108 Gene3D G3DSA:2.60.120.1460 1 105 8.5E-14 T 11-10-2018 AMC99_00146 e8233b75e5b41bab718659eaf0e8215c 108 SUPERFAMILY SSF46785 53 104 3.63E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02149 8190c158af92780d4800f1d64a2bcc3b 391 PRINTS PR00799 Aspartate aminotransferase signature 269 294 2.5E-25 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMC99_02149 8190c158af92780d4800f1d64a2bcc3b 391 PRINTS PR00799 Aspartate aminotransferase signature 202 214 2.5E-25 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMC99_02149 8190c158af92780d4800f1d64a2bcc3b 391 PRINTS PR00799 Aspartate aminotransferase signature 335 353 2.5E-25 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMC99_02149 8190c158af92780d4800f1d64a2bcc3b 391 PRINTS PR00799 Aspartate aminotransferase signature 171 190 2.5E-25 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 AMC99_02149 8190c158af92780d4800f1d64a2bcc3b 391 Pfam PF00155 Aminotransferase class I and II 27 386 3.8E-59 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_02149 8190c158af92780d4800f1d64a2bcc3b 391 SUPERFAMILY SSF53383 1 387 3.26E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_02149 8190c158af92780d4800f1d64a2bcc3b 391 Gene3D G3DSA:3.90.1150.10 6 386 3.1E-123 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_02149 8190c158af92780d4800f1d64a2bcc3b 391 Gene3D G3DSA:3.40.640.10 60 296 3.1E-123 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_01595 bff6c9fa9ede45925c08445c327401e1 284 Pfam PF00043 Glutathione S-transferase, C-terminal domain 182 251 9.1E-9 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMC99_01595 bff6c9fa9ede45925c08445c327401e1 284 Gene3D G3DSA:1.20.1050.10 133 250 2.8E-104 T 11-10-2018 AMC99_01595 bff6c9fa9ede45925c08445c327401e1 284 SUPERFAMILY SSF52833 39 130 1.67E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01595 bff6c9fa9ede45925c08445c327401e1 284 SUPERFAMILY SSF47616 133 280 1.25E-31 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_01595 bff6c9fa9ede45925c08445c327401e1 284 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 3.2E-6 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_01595 bff6c9fa9ede45925c08445c327401e1 284 Gene3D G3DSA:3.40.30.10 18 256 2.8E-104 T 11-10-2018 AMC99_00405 5dcfda1228214586d26324a89ce52920 148 Gene3D G3DSA:3.10.129.10 2 143 2.0E-25 T 11-10-2018 AMC99_00405 5dcfda1228214586d26324a89ce52920 148 SUPERFAMILY SSF54637 10 139 1.31E-19 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00405 5dcfda1228214586d26324a89ce52920 148 Pfam PF14539 Domain of unknown function (DUF4442) 10 137 4.9E-7 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 AMC99_00252 ed57c84f998f716ccfc2a945b185abdb 178 Pfam PF02556 Preprotein translocase subunit SecB 23 159 4.6E-47 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_00252 ed57c84f998f716ccfc2a945b185abdb 178 SUPERFAMILY SSF54611 27 158 4.14E-46 T 11-10-2018 IPR035958 SecB-like superfamily AMC99_00252 ed57c84f998f716ccfc2a945b185abdb 178 Hamap MF_00821 Protein-export protein SecB [secB]. 1 161 27.202 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_00252 ed57c84f998f716ccfc2a945b185abdb 178 Gene3D G3DSA:3.10.420.10 12 172 6.0E-51 T 11-10-2018 IPR035958 SecB-like superfamily AMC99_00252 ed57c84f998f716ccfc2a945b185abdb 178 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 23 159 1.4E-37 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_00252 ed57c84f998f716ccfc2a945b185abdb 178 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 29 46 5.3E-24 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_00252 ed57c84f998f716ccfc2a945b185abdb 178 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 89 109 5.3E-24 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_00252 ed57c84f998f716ccfc2a945b185abdb 178 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 139 157 5.3E-24 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_00252 ed57c84f998f716ccfc2a945b185abdb 178 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 113 135 5.3E-24 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 357 2.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 SUPERFAMILY SSF55874 348 516 6.81E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 516 1.7E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 Pfam PF00672 HAMP domain 237 289 2.2E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 Gene3D G3DSA:3.30.565.10 363 517 2.2E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 SMART SM00387 404 518 6.0E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 2.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 2.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 469 2.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 Gene3D G3DSA:1.20.1480.50 198 297 1.9E-12 T 11-10-2018 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 SMART SM00304 237 292 1.4E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 Gene3D G3DSA:1.10.287.130 298 354 3.1E-10 T 11-10-2018 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 SUPERFAMILY SSF47384 276 357 4.32E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 SUPERFAMILY SSF158472 237 291 6.8E-6 T 11-10-2018 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 SMART SM00388 293 358 6.8E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_01778 aaced3a0480c4e23feb0788d5a55f08d 518 Pfam PF13755 Sensor N-terminal transmembrane domain 20 71 7.0E-9 T 11-10-2018 IPR025908 Sensor N-terminal transmembrane domain AMC99_01919 82e590382b8824ad7fdf75b4e0f49fda 148 Pfam PF00075 RNase H 2 140 7.9E-47 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AMC99_01919 82e590382b8824ad7fdf75b4e0f49fda 148 SUPERFAMILY SSF53098 1 141 4.81E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMC99_01919 82e590382b8824ad7fdf75b4e0f49fda 148 Hamap MF_00042 Ribonuclease H [rnhA]. 1 148 34.896 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 AMC99_01919 82e590382b8824ad7fdf75b4e0f49fda 148 Gene3D G3DSA:3.30.420.10 1 147 1.1E-56 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMC99_01686 d14c7b720a12eecb36c2769fc1e8d085 514 Pfam PF03958 Bacterial type II/III secretion system short domain 166 265 1.2E-7 T 11-10-2018 IPR005644 NolW-like AMC99_01686 d14c7b720a12eecb36c2769fc1e8d085 514 Pfam PF00263 Bacterial type II and III secretion system protein 329 488 5.0E-45 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMC99_01686 d14c7b720a12eecb36c2769fc1e8d085 514 PRINTS PR00811 Bacterial general secretion pathway protein D signature 262 272 2.1E-12 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01686 d14c7b720a12eecb36c2769fc1e8d085 514 PRINTS PR00811 Bacterial general secretion pathway protein D signature 324 348 2.1E-12 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01686 d14c7b720a12eecb36c2769fc1e8d085 514 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 470 2.1E-12 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01686 d14c7b720a12eecb36c2769fc1e8d085 514 PRINTS PR00811 Bacterial general secretion pathway protein D signature 475 489 2.1E-12 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_00061 da591f307b0a44fb13c67824627cf63b 432 Pfam PF07804 HipA-like C-terminal domain 169 407 9.1E-47 T 11-10-2018 IPR012893 HipA-like, C-terminal AMC99_00061 da591f307b0a44fb13c67824627cf63b 432 Pfam PF13657 HipA N-terminal domain 6 115 1.2E-25 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 Gene3D G3DSA:2.10.230.10 157 220 1.6E-20 T 11-10-2018 AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 Pfam PF01556 DnaJ C terminal domain 131 344 6.7E-39 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 Gene3D G3DSA:2.60.260.20 265 370 2.4E-29 T 11-10-2018 AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 SUPERFAMILY SSF57938 144 219 3.79E-20 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 SUPERFAMILY SSF46565 8 117 4.06E-33 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 SMART SM00271 12 70 3.4E-28 T 11-10-2018 IPR001623 DnaJ domain AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 Pfam PF00684 DnaJ central domain 157 217 8.3E-13 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 SUPERFAMILY SSF49493 124 276 1.1E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 SUPERFAMILY SSF49493 268 355 7.72E-23 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 PRINTS PR00625 DnaJ domain signature 33 48 1.1E-26 T 11-10-2018 IPR001623 DnaJ domain AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 PRINTS PR00625 DnaJ domain signature 70 89 1.1E-26 T 11-10-2018 IPR001623 DnaJ domain AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 PRINTS PR00625 DnaJ domain signature 15 33 1.1E-26 T 11-10-2018 IPR001623 DnaJ domain AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 PRINTS PR00625 DnaJ domain signature 50 70 1.1E-26 T 11-10-2018 IPR001623 DnaJ domain AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 13 361 2.3E-130 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 Gene3D G3DSA:1.10.287.110 9 121 7.5E-35 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 Pfam PF00226 DnaJ domain 13 75 9.8E-26 T 11-10-2018 IPR001623 DnaJ domain AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 10 380 39.854 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMC99_01159 c5f9e96820a454b309f390dd460849f3 383 ProSitePatterns PS00636 Nt-dnaJ domain signature. 55 74 - T 11-10-2018 IPR018253 DnaJ domain, conserved site AMC99_00569 25ca677b4be4615f4b532951cee73624 191 Gene3D G3DSA:2.60.370.10 61 191 3.2E-52 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00569 25ca677b4be4615f4b532951cee73624 191 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 190 37.053 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00569 25ca677b4be4615f4b532951cee73624 191 SUPERFAMILY SSF110111 66 187 3.01E-48 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00569 25ca677b4be4615f4b532951cee73624 191 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 31 183 1.1E-55 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00569 25ca677b4be4615f4b532951cee73624 191 PIRSF PIRSF005413 1 191 1.8E-69 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 121 2.7E-16 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 77 3.1E-16 T 11-10-2018 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Gene3D G3DSA:3.30.70.20 126 205 5.7E-6 T 11-10-2018 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 SMART SM00929 84 124 2.8E-20 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 SUPERFAMILY SSF54292 1 75 2.57E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 99 111 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 SUPERFAMILY SSF54862 76 212 2.8E-35 T 11-10-2018 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Gene3D G3DSA:3.40.50.740 280 338 1.5E-10 T 11-10-2018 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 SUPERFAMILY SSF53706 214 608 3.35E-84 T 11-10-2018 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Gene3D G3DSA:3.40.228.10 339 405 1.5E-10 T 11-10-2018 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Gene3D G3DSA:3.40.50.740 519 627 3.9E-19 T 11-10-2018 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 622 656 1.1E-9 T 11-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Gene3D G3DSA:3.10.20.740 1 124 1.9E-39 T 11-10-2018 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Pfam PF00384 Molybdopterin oxidoreductase 448 583 3.6E-26 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 Pfam PF00384 Molybdopterin oxidoreductase 277 421 1.8E-23 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01253 83b994b3326514a1ebf14e56e309f195 671 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 581 6.5E-205 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_02249 f553e3edc65f3a8b3f3281a4cb168484 369 Pfam PF00561 alpha/beta hydrolase fold 43 351 2.0E-29 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_02249 f553e3edc65f3a8b3f3281a4cb168484 369 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 14 364 2.2E-135 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AMC99_02249 f553e3edc65f3a8b3f3281a4cb168484 369 Gene3D G3DSA:3.40.50.1820 18 353 1.9E-138 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02249 f553e3edc65f3a8b3f3281a4cb168484 369 PIRSF PIRSF000443 2 369 5.5E-136 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AMC99_02249 f553e3edc65f3a8b3f3281a4cb168484 369 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 4 365 31.525 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 AMC99_02249 f553e3edc65f3a8b3f3281a4cb168484 369 Gene3D G3DSA:1.10.1740.110 177 283 1.9E-138 T 11-10-2018 AMC99_02249 f553e3edc65f3a8b3f3281a4cb168484 369 SUPERFAMILY SSF53474 14 365 2.8E-100 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:3.40.50.300 550 764 8.9E-87 T 11-10-2018 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:3.40.50.300 151 344 6.0E-75 T 11-10-2018 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 SUPERFAMILY SSF81923 4 158 2.85E-39 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 337 1.9E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 SUPERFAMILY SSF52540 546 850 6.48E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:1.10.8.60 766 858 4.3E-28 T 11-10-2018 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.4E-54 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 5.8E-26 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 SMART SM00382 597 767 1.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 SMART SM00382 200 345 4.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 SUPERFAMILY SSF52540 160 545 2.84E-100 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:1.10.1780.10 1 150 8.4E-31 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.9E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.9E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.9E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.9E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Gene3D G3DSA:3.40.50.300 345 544 2.3E-72 T 11-10-2018 AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.4E-10 T 11-10-2018 IPR004176 Clp, N-terminal AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 146 3.7E-9 T 11-10-2018 IPR004176 Clp, N-terminal AMC99_01940 61f5dd2ce1623f427c8b16da50d090d4 858 SMART SM01086 766 855 6.3E-40 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 SUPERFAMILY SSF52540 213 605 7.79E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 SMART SM00490 491 584 2.9E-4 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 Pfam PF00271 Helicase conserved C-terminal domain 502 583 1.3E-4 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 307 316 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 Gene3D G3DSA:1.10.8.630 4 108 1.7E-18 T 11-10-2018 AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 SMART SM00487 185 384 4.5E-23 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 Pfam PF00270 DEAD/DEAH box helicase 213 356 2.3E-14 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 SUPERFAMILY SSF52540 182 368 1.03E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 Gene3D G3DSA:3.40.50.300 180 370 3.9E-66 T 11-10-2018 AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 TIGRFAM TIGR00595 priA: primosomal protein N' 213 718 5.9E-186 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMC99_01651 df81dc9a4706543c58f737aeb3e1ac54 721 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 720 23.303 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMC99_00666 686188ead828e33cba0ed1566b5dfb14 342 Pfam PF00348 Polyprenyl synthetase 51 293 1.6E-69 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMC99_00666 686188ead828e33cba0ed1566b5dfb14 342 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 99 113 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMC99_00666 686188ead828e33cba0ed1566b5dfb14 342 SUPERFAMILY SSF48576 20 341 1.92E-93 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMC99_00666 686188ead828e33cba0ed1566b5dfb14 342 Gene3D G3DSA:1.10.600.10 16 341 3.2E-107 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMC99_02028 a5318ebaead333833b9ec0c931ec2358 356 SUPERFAMILY SSF81324 25 167 6.02E-21 T 11-10-2018 AMC99_02028 a5318ebaead333833b9ec0c931ec2358 356 Pfam PF07885 Ion channel 56 125 5.9E-11 T 11-10-2018 IPR013099 Potassium channel domain AMC99_02028 a5318ebaead333833b9ec0c931ec2358 356 Pfam PF02254 TrkA-N domain 146 264 3.4E-24 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMC99_02028 a5318ebaead333833b9ec0c931ec2358 356 SUPERFAMILY SSF51735 142 285 2.89E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02028 a5318ebaead333833b9ec0c931ec2358 356 Gene3D G3DSA:3.40.50.720 136 278 4.5E-32 T 11-10-2018 AMC99_02028 a5318ebaead333833b9ec0c931ec2358 356 Gene3D G3DSA:1.10.287.70 31 135 7.7E-11 T 11-10-2018 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 154 7.3E-41 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Gene3D G3DSA:3.40.50.720 1 187 3.3E-53 T 11-10-2018 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 1.3E-37 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 1.3E-37 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 237 254 1.3E-37 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 131 151 1.3E-37 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 1.3E-37 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 320 32.941 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 SUPERFAMILY SSF51735 5 179 1.05E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 SUPERFAMILY SSF48179 178 329 1.56E-46 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Gene3D G3DSA:1.10.1040.10 188 333 4.3E-46 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 PIRSF PIRSF000114 1 330 2.7E-87 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_00814 5cdd2e2ac6e47b67d8d3c273da30c8a5 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 315 4.7E-46 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AMC99_01952 a88e439ee4c7457e8a3abc632a585b07 342 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 162 303 7.2E-27 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_01952 a88e439ee4c7457e8a3abc632a585b07 342 Gene3D G3DSA:1.10.287.950 12 342 3.8E-39 T 11-10-2018 AMC99_01952 a88e439ee4c7457e8a3abc632a585b07 342 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 181 208 6.3E-15 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMC99_01952 a88e439ee4c7457e8a3abc632a585b07 342 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 210 239 6.3E-15 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMC99_01952 a88e439ee4c7457e8a3abc632a585b07 342 SUPERFAMILY SSF58104 89 336 3.66E-41 T 11-10-2018 AMC99_01952 a88e439ee4c7457e8a3abc632a585b07 342 SMART SM00283 83 337 1.3E-28 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_00233 5c38091937cf61106b5388d92503f566 350 PIRSF PIRSF005539 51 349 1.5E-81 T 11-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_00233 5c38091937cf61106b5388d92503f566 350 Gene3D G3DSA:3.40.50.1820 53 346 2.4E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00233 5c38091937cf61106b5388d92503f566 350 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 107 118 5.5E-12 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_00233 5c38091937cf61106b5388d92503f566 350 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 79 87 5.5E-12 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_00233 5c38091937cf61106b5388d92503f566 350 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 152 166 5.5E-12 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_00233 5c38091937cf61106b5388d92503f566 350 SUPERFAMILY SSF53474 62 342 1.09E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00233 5c38091937cf61106b5388d92503f566 350 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 59 342 1.1E-81 T 11-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_00233 5c38091937cf61106b5388d92503f566 350 Pfam PF12697 Alpha/beta hydrolase family 79 333 2.6E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 2.8E-69 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 111 126 2.8E-69 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 2.8E-69 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 375 392 2.8E-69 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 139 161 2.8E-69 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 352 363 2.8E-69 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 2.8E-69 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 2.8E-69 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 2.8E-69 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 SUPERFAMILY SSF53748 4 398 4.48E-136 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 399 36.179 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 Gene3D G3DSA:3.40.50.1260 171 389 1.0E-131 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 Pfam PF00162 Phosphoglycerate kinase 8 389 1.1E-129 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 Gene3D G3DSA:3.40.50.1260 12 397 1.0E-131 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00984 d73fa8d245f7324b79731ea86f315ec5 399 PIRSF PIRSF000724 1 399 6.7E-125 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00529 84701c3a6a4b5f963246ff039b4726ec 491 Pfam PF03055 Retinal pigment epithelial membrane protein 26 484 2.4E-93 T 11-10-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 AMC99_00264 814a3d813f7886fe6b90252f24c5afa5 373 Hamap MF_00300 Chorismate synthase [aroC]. 23 373 36.337 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMC99_00264 814a3d813f7886fe6b90252f24c5afa5 373 Gene3D G3DSA:3.60.150.10 14 373 4.6E-147 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMC99_00264 814a3d813f7886fe6b90252f24c5afa5 373 TIGRFAM TIGR00033 aroC: chorismate synthase 23 371 3.2E-132 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMC99_00264 814a3d813f7886fe6b90252f24c5afa5 373 ProSitePatterns PS00788 Chorismate synthase signature 2. 137 153 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMC99_00264 814a3d813f7886fe6b90252f24c5afa5 373 ProSitePatterns PS00789 Chorismate synthase signature 3. 340 356 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMC99_00264 814a3d813f7886fe6b90252f24c5afa5 373 Pfam PF01264 Chorismate synthase 23 365 8.2E-138 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMC99_00264 814a3d813f7886fe6b90252f24c5afa5 373 PIRSF PIRSF001456 16 372 6.6E-140 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMC99_00264 814a3d813f7886fe6b90252f24c5afa5 373 SUPERFAMILY SSF103263 16 371 5.89E-139 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMC99_00264 814a3d813f7886fe6b90252f24c5afa5 373 ProSitePatterns PS00787 Chorismate synthase signature 1. 29 44 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 AMC99_00478 9fa00c4b6779bc68ceaf218785308dfe 393 SUPERFAMILY SSF53901 1 267 4.47E-66 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00478 9fa00c4b6779bc68ceaf218785308dfe 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMC99_00478 9fa00c4b6779bc68ceaf218785308dfe 393 Gene3D G3DSA:3.40.47.10 4 280 1.2E-132 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00478 9fa00c4b6779bc68ceaf218785308dfe 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 3.8E-58 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMC99_00478 9fa00c4b6779bc68ceaf218785308dfe 393 SUPERFAMILY SSF53901 271 392 1.78E-40 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00478 9fa00c4b6779bc68ceaf218785308dfe 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 5.2E-42 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMC99_00478 9fa00c4b6779bc68ceaf218785308dfe 393 PIRSF PIRSF000429 1 393 3.8E-114 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_00478 9fa00c4b6779bc68ceaf218785308dfe 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 5.3E-124 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_00478 9fa00c4b6779bc68ceaf218785308dfe 393 Gene3D G3DSA:3.40.47.10 136 387 1.2E-132 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 Pfam PF02779 Transketolase, pyrimidine binding domain 404 582 1.1E-25 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 Gene3D G3DSA:3.40.50.970 398 588 1.2E-55 T 11-10-2018 AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 Gene3D G3DSA:3.40.50.970 13 384 1.2E-58 T 11-10-2018 AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 SUPERFAMILY SSF52518 30 382 1.73E-54 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 SUPERFAMILY SSF52518 402 589 4.87E-46 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 SUPERFAMILY SSF52922 604 733 1.18E-28 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 Pfam PF02780 Transketolase, C-terminal domain 608 725 1.1E-21 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 Gene3D G3DSA:3.40.50.920 607 733 1.3E-25 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 SMART SM00861 402 583 3.9E-42 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_01677 d1071c23ad25baae429c1628b8e12303 737 Pfam PF00676 Dehydrogenase E1 component 45 347 2.0E-27 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMC99_02264 0228f8e23631046fe9d6e1f4afadf6fe 96 Gene3D G3DSA:3.30.70.1060 2 90 1.5E-14 T 11-10-2018 AMC99_02264 0228f8e23631046fe9d6e1f4afadf6fe 96 Pfam PF03795 YCII-related domain 13 83 4.7E-7 T 11-10-2018 IPR005545 YCII-related AMC99_02264 0228f8e23631046fe9d6e1f4afadf6fe 96 SUPERFAMILY SSF54909 18 89 1.8E-9 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMC99_00137 36a2976bf10cd262ecd9eeccabd4ab0c 181 PIRSF PIRSF006443 3 170 5.9E-55 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AMC99_00137 36a2976bf10cd262ecd9eeccabd4ab0c 181 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 77 90 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 AMC99_00137 36a2976bf10cd262ecd9eeccabd4ab0c 181 Gene3D G3DSA:3.40.980.10 8 175 2.9E-49 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_00137 36a2976bf10cd262ecd9eeccabd4ab0c 181 SMART SM00852 19 163 4.8E-31 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_00137 36a2976bf10cd262ecd9eeccabd4ab0c 181 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 16 155 7.2E-34 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_00137 36a2976bf10cd262ecd9eeccabd4ab0c 181 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 13 171 2.7E-67 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AMC99_00137 36a2976bf10cd262ecd9eeccabd4ab0c 181 Pfam PF00994 Probable molybdopterin binding domain 19 156 7.0E-35 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_00137 36a2976bf10cd262ecd9eeccabd4ab0c 181 SUPERFAMILY SSF53218 11 167 1.96E-43 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_00454 e1a398bb1913e30650236f536b2f8e02 421 Pfam PF01734 Patatin-like phospholipase 48 243 4.0E-14 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AMC99_00454 e1a398bb1913e30650236f536b2f8e02 421 Gene3D G3DSA:3.40.1090.10 105 243 7.8E-9 T 11-10-2018 AMC99_00454 e1a398bb1913e30650236f536b2f8e02 421 SUPERFAMILY SSF52151 43 242 4.45E-27 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMC99_00648 86c26db3039d24acc1bba8eb888d5f42 149 PIRSF PIRSF001399 4 148 4.7E-58 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMC99_00648 86c26db3039d24acc1bba8eb888d5f42 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 61.118 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMC99_00648 86c26db3039d24acc1bba8eb888d5f42 149 Pfam PF01220 Dehydroquinase class II 8 144 8.4E-56 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMC99_00648 86c26db3039d24acc1bba8eb888d5f42 149 Gene3D G3DSA:3.40.50.9100 4 148 7.9E-60 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMC99_00648 86c26db3039d24acc1bba8eb888d5f42 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 8 145 8.4E-52 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMC99_00648 86c26db3039d24acc1bba8eb888d5f42 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 11 28 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMC99_00648 86c26db3039d24acc1bba8eb888d5f42 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 8 145 7.0E-58 T 11-10-2018 AMC99_00648 86c26db3039d24acc1bba8eb888d5f42 149 SUPERFAMILY SSF52304 8 146 1.13E-56 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 AMC99_02714 2fcf79d232ab71c2641e44639924c6db 474 Pfam PF07687 Peptidase dimerisation domain 205 296 1.9E-7 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMC99_02714 2fcf79d232ab71c2641e44639924c6db 474 SUPERFAMILY SSF53187 29 441 2.63E-53 T 11-10-2018 AMC99_02714 2fcf79d232ab71c2641e44639924c6db 474 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 40 404 1.1E-70 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AMC99_02714 2fcf79d232ab71c2641e44639924c6db 474 PIRSF PIRSF037227 20 474 1.1E-161 T 11-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B AMC99_02714 2fcf79d232ab71c2641e44639924c6db 474 SUPERFAMILY SSF55031 206 312 6.54E-22 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMC99_02714 2fcf79d232ab71c2641e44639924c6db 474 Pfam PF01546 Peptidase family M20/M25/M40 97 337 3.6E-9 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMC99_02368 76e3b6d13f43d672ed60366cfaa06699 613 SUPERFAMILY SSF52540 361 607 7.83E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02368 76e3b6d13f43d672ed60366cfaa06699 613 Gene3D G3DSA:1.20.1560.10 35 355 7.2E-77 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMC99_02368 76e3b6d13f43d672ed60366cfaa06699 613 Pfam PF00664 ABC transporter transmembrane region 54 312 2.3E-48 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMC99_02368 76e3b6d13f43d672ed60366cfaa06699 613 SUPERFAMILY SSF90123 39 351 4.05E-70 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMC99_02368 76e3b6d13f43d672ed60366cfaa06699 613 SMART SM00382 396 582 4.0E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02368 76e3b6d13f43d672ed60366cfaa06699 613 Gene3D G3DSA:3.40.50.300 364 612 3.3E-95 T 11-10-2018 AMC99_02368 76e3b6d13f43d672ed60366cfaa06699 613 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_02368 76e3b6d13f43d672ed60366cfaa06699 613 Pfam PF00005 ABC transporter 387 536 2.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 Gene3D G3DSA:1.10.730.10 453 581 2.0E-137 T 11-10-2018 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 SUPERFAMILY SSF52374 122 469 1.32E-78 T 11-10-2018 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 166 179 5.9E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 127 142 5.9E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 142 158 5.9E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 325 346 5.9E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 SUPERFAMILY SSF47323 452 581 3.47E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 Gene3D G3DSA:3.40.50.620 127 452 2.0E-137 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01915 9766de3ce075c1223b20e850648a670c 581 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 32 581 1.4E-112 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 14 98 6.6E-24 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 Pfam PF05746 DALR anticodon binding domain 458 581 3.0E-33 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 137 146 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 Gene3D G3DSA:3.30.1360.70 5 115 5.6E-25 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 581 24.631 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 SMART SM00836 458 581 3.4E-57 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 SMART SM01016 9 98 1.8E-37 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 SUPERFAMILY SSF55190 13 118 3.27E-24 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AMC99_01915 9766de3ce075c1223b20e850648a670c 581 Pfam PF00750 tRNA synthetases class I (R) 117 423 5.4E-16 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 Gene3D G3DSA:3.40.50.720 3 261 6.4E-60 T 11-10-2018 AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 Pfam PF00106 short chain dehydrogenase 5 192 1.4E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 SUPERFAMILY SSF51735 4 262 4.11E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.8E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.8E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.8E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01881 96ef8f36407a5c3cc4fa99f86bbc3b31 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02649 36f9d0e3e2c2e14a72187c7093e22b8c 172 PRINTS PR00070 Dihydrofolate reductase signature 16 26 8.9E-15 T 11-10-2018 AMC99_02649 36f9d0e3e2c2e14a72187c7093e22b8c 172 PRINTS PR00070 Dihydrofolate reductase signature 48 59 8.9E-15 T 11-10-2018 AMC99_02649 36f9d0e3e2c2e14a72187c7093e22b8c 172 PRINTS PR00070 Dihydrofolate reductase signature 102 116 8.9E-15 T 11-10-2018 AMC99_02649 36f9d0e3e2c2e14a72187c7093e22b8c 172 PRINTS PR00070 Dihydrofolate reductase signature 30 38 8.9E-15 T 11-10-2018 AMC99_02649 36f9d0e3e2c2e14a72187c7093e22b8c 172 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 16 38 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 AMC99_02649 36f9d0e3e2c2e14a72187c7093e22b8c 172 SUPERFAMILY SSF53597 5 169 3.14E-49 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMC99_02649 36f9d0e3e2c2e14a72187c7093e22b8c 172 Pfam PF00186 Dihydrofolate reductase 6 168 1.6E-50 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 AMC99_02649 36f9d0e3e2c2e14a72187c7093e22b8c 172 PIRSF PIRSF000194 1 171 1.8E-56 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 AMC99_02649 36f9d0e3e2c2e14a72187c7093e22b8c 172 Gene3D G3DSA:3.40.430.10 5 172 5.6E-52 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 SMART SM00363 94 158 1.6E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 Pfam PF01479 S4 domain 94 141 1.8E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 SUPERFAMILY SSF55174 6 204 3.79E-56 T 11-10-2018 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 30.113 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 Gene3D G3DSA:3.10.290.10 93 187 1.1E-62 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 Gene3D G3DSA:1.10.1050.10 7 204 1.1E-62 T 11-10-2018 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 5 93 1.7E-24 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 6 204 1.8E-65 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_01068 53bbb6bb6ea1b53588f6f5262e831430 204 SMART SM01390 3 93 6.8E-39 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AMC99_00323 5ac10743796baa1848ddf608d6b0cf0d 399 Gene3D G3DSA:3.90.1150.10 289 386 2.3E-119 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_00323 5ac10743796baa1848ddf608d6b0cf0d 399 Pfam PF00155 Aminotransferase class I and II 32 383 2.2E-62 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_00323 5ac10743796baa1848ddf608d6b0cf0d 399 SUPERFAMILY SSF53383 3 389 1.08E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_00323 5ac10743796baa1848ddf608d6b0cf0d 399 Gene3D G3DSA:3.40.640.10 65 288 2.3E-119 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_00323 5ac10743796baa1848ddf608d6b0cf0d 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AMC99_01885 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 8.6E-37 T 11-10-2018 AMC99_01885 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 132 155 8.6E-37 T 11-10-2018 AMC99_01885 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 101 119 8.6E-37 T 11-10-2018 AMC99_01885 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 27 48 8.6E-37 T 11-10-2018 AMC99_01885 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 8.6E-37 T 11-10-2018 AMC99_01885 1ac6fc761b9027043dcbf9e6f3c76818 216 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 188 211 8.6E-37 T 11-10-2018 AMC99_01885 1ac6fc761b9027043dcbf9e6f3c76818 216 Pfam PF03379 CcmB protein 2 211 1.3E-43 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_01885 1ac6fc761b9027043dcbf9e6f3c76818 216 PIRSF PIRSF002764 1 215 8.7E-51 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMC99_00587 5ec077e566bf324d0fd5f971ddc068ed 176 Gene3D G3DSA:1.10.357.10 1 175 6.2E-12 T 11-10-2018 AMC99_00587 5ec077e566bf324d0fd5f971ddc068ed 176 SUPERFAMILY SSF46689 2 55 5.64E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_00738 6d45bfc74349c52f89190d5795a89bee 333 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 211 266 2.1E-12 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AMC99_00738 6d45bfc74349c52f89190d5795a89bee 333 SUPERFAMILY SSF55120 8 252 2.5E-70 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_00738 6d45bfc74349c52f89190d5795a89bee 333 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 9 249 2.9E-67 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_00738 6d45bfc74349c52f89190d5795a89bee 333 Gene3D G3DSA:3.30.2350.10 2 265 2.8E-79 T 11-10-2018 AMC99_00738 6d45bfc74349c52f89190d5795a89bee 333 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 8 326 17.841 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_00738 6d45bfc74349c52f89190d5795a89bee 333 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 40 162 9.2E-47 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AMC99_02530 61ad687719a9b9c5a86f3a6681e76b00 109 Gene3D G3DSA:2.60.300.12 4 109 2.0E-36 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMC99_02530 61ad687719a9b9c5a86f3a6681e76b00 109 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 104 3.8E-20 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AMC99_02530 61ad687719a9b9c5a86f3a6681e76b00 109 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 5 108 1.3E-35 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AMC99_02530 61ad687719a9b9c5a86f3a6681e76b00 109 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 90 107 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AMC99_02530 61ad687719a9b9c5a86f3a6681e76b00 109 SUPERFAMILY SSF89360 5 97 4.71E-28 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMC99_01296 6bee3a8eb0c9e2aac2bedec6b7b36461 544 SUPERFAMILY SSF56935 65 512 1.01E-8 T 11-10-2018 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 SMART SM00840 367 422 0.009 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 SUPERFAMILY SSF52374 6 332 2.82E-64 T 11-10-2018 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 Gene3D G3DSA:3.40.50.620 5 324 3.6E-108 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 6 481 31.739 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 SUPERFAMILY SSF47323 355 473 7.85E-25 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 29 40 3.0E-21 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 65 74 3.0E-21 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 204 222 3.0E-21 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 235 256 3.0E-21 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 Gene3D G3DSA:1.20.120.1910 325 481 6.8E-26 T 11-10-2018 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 6 472 6.9E-113 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AMC99_01644 4306857c010d8ecd2b0bb48ae9fa9c2f 482 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 19 332 8.9E-77 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AMC99_01051 9395ce972b54a3a81f1a05374e61ec09 229 Pfam PF00881 Nitroreductase family 36 205 3.2E-26 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMC99_01051 9395ce972b54a3a81f1a05374e61ec09 229 SUPERFAMILY SSF55469 32 228 7.59E-44 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMC99_01051 9395ce972b54a3a81f1a05374e61ec09 229 Gene3D G3DSA:3.40.109.10 6 227 5.0E-54 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMC99_00715 581d6d4686e359017504cf20b70218c2 136 SUPERFAMILY SSF88697 3 135 2.4E-47 T 11-10-2018 IPR015947 PUA-like superfamily AMC99_00715 581d6d4686e359017504cf20b70218c2 136 Gene3D G3DSA:3.10.590.10 3 136 8.2E-49 T 11-10-2018 AMC99_00715 581d6d4686e359017504cf20b70218c2 136 Pfam PF01878 EVE domain 3 133 2.7E-42 T 11-10-2018 IPR002740 EVE domain AMC99_01025 8c811d9f398e2a36867a9a18e89a6f4a 412 SUPERFAMILY SSF161098 175 399 9.29E-30 T 11-10-2018 IPR035906 MetI-like superfamily AMC99_01025 8c811d9f398e2a36867a9a18e89a6f4a 412 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 197 408 2.2E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMC99_01025 8c811d9f398e2a36867a9a18e89a6f4a 412 Gene3D G3DSA:1.10.3720.10 177 410 6.1E-31 T 11-10-2018 IPR035906 MetI-like superfamily AMC99_01025 8c811d9f398e2a36867a9a18e89a6f4a 412 Pfam PF12501 Phosphate ATP-binding cassette transporter 1 129 2.3E-11 T 11-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 AMC99_01025 8c811d9f398e2a36867a9a18e89a6f4a 412 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 114 407 3.2E-82 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AMC99_00142 912352ebb8052545e71b72d1d63dc88d 420 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 401 9.4E-37 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00142 912352ebb8052545e71b72d1d63dc88d 420 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 140 234 3.9E-20 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00142 912352ebb8052545e71b72d1d63dc88d 420 SUPERFAMILY SSF47203 251 410 1.08E-41 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00142 912352ebb8052545e71b72d1d63dc88d 420 Gene3D G3DSA:1.20.140.10 254 412 2.7E-37 T 11-10-2018 AMC99_00142 912352ebb8052545e71b72d1d63dc88d 420 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 136 8.3E-19 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00142 912352ebb8052545e71b72d1d63dc88d 420 Gene3D G3DSA:1.10.540.10 1 138 2.1E-54 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00142 912352ebb8052545e71b72d1d63dc88d 420 SUPERFAMILY SSF56645 1 266 6.28E-70 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00142 912352ebb8052545e71b72d1d63dc88d 420 Gene3D G3DSA:2.40.110.10 139 253 1.9E-49 T 11-10-2018 AMC99_00804 da3b3b87710637000311ddf01041d3b1 281 Pfam PF00756 Putative esterase 24 272 5.6E-59 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMC99_00804 da3b3b87710637000311ddf01041d3b1 281 SUPERFAMILY SSF53474 5 280 2.35E-88 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00804 da3b3b87710637000311ddf01041d3b1 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 279 1.4E-129 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 AMC99_00804 da3b3b87710637000311ddf01041d3b1 281 Gene3D G3DSA:3.40.50.1820 4 280 2.3E-95 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 Gene3D G3DSA:3.40.1190.10 99 333 1.7E-60 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 Gene3D G3DSA:3.90.190.20 338 494 5.8E-52 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 SUPERFAMILY SSF63418 10 94 1.27E-16 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 SUPERFAMILY SSF53244 330 488 2.22E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 420 6.9E-20 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 Pfam PF08245 Mur ligase middle domain 104 309 1.1E-42 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 SUPERFAMILY SSF53623 100 329 2.88E-64 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 19 488 1.1E-126 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 Pfam PF01225 Mur ligase family, catalytic domain 22 80 2.8E-5 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 489 29.499 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AMC99_01870 e6c14c798cbfc0499afa3d39d2a73488 495 Gene3D G3DSA:3.40.1390.10 5 95 4.8E-15 T 11-10-2018 AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 Pfam PF01494 FAD binding domain 20 356 1.4E-27 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 Gene3D G3DSA:3.30.9.50 93 286 1.1E-96 T 11-10-2018 AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 311 324 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 SUPERFAMILY SSF51905 20 402 5.89E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 20 406 4.1E-117 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 Gene3D G3DSA:3.50.50.60 20 355 1.1E-96 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 5.4E-17 T 11-10-2018 AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 5.4E-17 T 11-10-2018 AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 20 42 5.4E-17 T 11-10-2018 AMC99_00819 68fa25bf4127a0038d2fb6ef05798e77 418 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 168 183 5.4E-17 T 11-10-2018 AMC99_02045 ecf92031fdd1eee803d85a801b36c96f 65 Pfam PF04325 Protein of unknown function (DUF465) 12 55 2.6E-16 T 11-10-2018 IPR007420 Protein of unknown function DUF465 AMC99_02045 ecf92031fdd1eee803d85a801b36c96f 65 Gene3D G3DSA:1.20.58.660 4 58 5.1E-7 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 14 393 43.402 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00096 Glutamine amidotransferase superfamily signature 276 287 9.9E-13 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00096 Glutamine amidotransferase superfamily signature 367 380 9.9E-13 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00096 Glutamine amidotransferase superfamily signature 247 256 9.9E-13 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 Gene3D G3DSA:3.50.30.20 14 163 2.8E-49 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 SMART SM01097 14 144 5.6E-80 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00097 Anthranilate synthase component II signature 247 256 1.1E-7 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00097 Anthranilate synthase component II signature 367 380 1.1E-7 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00097 Anthranilate synthase component II signature 276 287 1.1E-7 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 16 143 1.2E-45 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 17 391 1.6E-122 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 Gene3D G3DSA:3.40.50.880 165 392 4.7E-65 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 Pfam PF00117 Glutamine amidotransferase class-I 207 389 2.0E-44 T 11-10-2018 IPR017926 Glutamine amidotransferase AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 276 292 1.6E-29 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 293 310 1.6E-29 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 205 219 1.6E-29 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 244 258 1.6E-29 T 11-10-2018 AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 SUPERFAMILY SSF52317 199 391 5.04E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01079 5df36aa6f9453d4a9cb348689ca62963 393 SUPERFAMILY SSF52021 16 160 2.09E-52 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 239 1.1E-102 T 11-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 1.9E-6 T 11-10-2018 AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 Gene3D G3DSA:3.40.50.720 1 240 1.5E-80 T 11-10-2018 AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 238 2.3E-61 T 11-10-2018 AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 SUPERFAMILY SSF51735 4 239 4.25E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.8E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.8E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 2.8E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.8E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.8E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.1E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.1E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02393 7c0ef010c4d4ab627dd4abf79f83d249 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.1E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01386 fab856e5c7bf4c78fc3cc784fe9c64bc 276 Gene3D G3DSA:3.40.50.10740 5 268 3.2E-70 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal AMC99_01386 fab856e5c7bf4c78fc3cc784fe9c64bc 276 Pfam PF02016 LD-carboxypeptidase 4 269 1.6E-41 T 11-10-2018 IPR003507 Peptidase family S66 AMC99_01386 fab856e5c7bf4c78fc3cc784fe9c64bc 276 Gene3D G3DSA:3.50.30.60 155 259 3.2E-70 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AMC99_01386 fab856e5c7bf4c78fc3cc784fe9c64bc 276 SUPERFAMILY SSF141986 165 269 2.62E-18 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily AMC99_01386 fab856e5c7bf4c78fc3cc784fe9c64bc 276 SUPERFAMILY SSF52317 3 153 3.43E-29 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01328 48f2a6940a90a404564cc5dc7e695acc 490 Pfam PF13537 Glutamine amidotransferase domain 102 216 6.2E-23 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMC99_01328 48f2a6940a90a404564cc5dc7e695acc 490 Gene3D G3DSA:3.60.20.10 19 467 4.3E-151 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_01328 48f2a6940a90a404564cc5dc7e695acc 490 SUPERFAMILY SSF56235 19 242 5.58E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_01328 48f2a6940a90a404564cc5dc7e695acc 490 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 19 466 2.7E-148 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMC99_01328 48f2a6940a90a404564cc5dc7e695acc 490 PIRSF PIRSF000485 15 481 3.4E-163 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMC99_01328 48f2a6940a90a404564cc5dc7e695acc 490 Gene3D G3DSA:3.40.50.2020 279 443 4.3E-151 T 11-10-2018 AMC99_01328 48f2a6940a90a404564cc5dc7e695acc 490 SUPERFAMILY SSF53271 254 472 1.85E-72 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMC99_01328 48f2a6940a90a404564cc5dc7e695acc 490 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 18 465 44.939 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AMC99_01328 48f2a6940a90a404564cc5dc7e695acc 490 Pfam PF00156 Phosphoribosyl transferase domain 289 391 2.8E-8 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMC99_01565 7e22cf475934dfa8d41c79545fdc12d3 553 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 16 62 4.9E-12 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF01339 CheB methylesterase 12 186 7.8E-53 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF55785 689 810 2.72E-5 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF13596 PAS domain 704 810 5.2E-12 T 11-10-2018 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:3.30.450.20 689 820 2.7E-9 T 11-10-2018 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:3.40.50.150 272 470 1.2E-60 T 11-10-2018 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF52738 9 193 2.35E-52 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:3.30.450.20 821 934 1.3E-16 T 11-10-2018 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 SMART SM00911 951 1031 6.8E-25 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF07536 HWE histidine kinase 951 1029 3.4E-18 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF55785 809 936 6.11E-13 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 SMART SM00138 205 468 4.0E-82 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:3.40.50.180 2 197 3.6E-61 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF01739 CheR methyltransferase, SAM binding domain 273 464 1.3E-55 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF08447 PAS fold 853 931 7.3E-8 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Pfam PF03705 CheR methyltransferase, all-alpha domain 212 260 4.4E-12 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 Gene3D G3DSA:3.30.565.10 999 1127 4.1E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF47757 209 275 2.48E-12 T 11-10-2018 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 342 358 1.1E-29 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 266 278 1.1E-29 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 229 242 1.1E-29 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 306 326 1.1E-29 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 408 422 1.1E-29 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 PRINTS PR00996 Glutamate methyltransferase family signature 427 450 1.1E-29 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02222 a98482bd6500a0834092b315ca3e4675 1129 SUPERFAMILY SSF53335 273 464 6.09E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 Gene3D G3DSA:1.10.3260.10 2 172 2.6E-8 T 11-10-2018 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily GO:0003677|GO:0003910|GO:0006281|GO:0006310 AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 Pfam PF04675 DNA ligase N terminus 3 155 7.2E-6 T 11-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 SUPERFAMILY SSF50249 405 528 5.48E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 Gene3D G3DSA:2.40.50.140 403 530 5.5E-33 T 11-10-2018 AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 Gene3D G3DSA:3.30.470.30 200 398 2.3E-45 T 11-10-2018 AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 SUPERFAMILY SSF56091 197 398 1.14E-53 T 11-10-2018 AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 221 229 - T 11-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 Pfam PF04679 ATP dependent DNA ligase C terminal region 419 513 5.0E-12 T 11-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 528 2.7E-241 T 11-10-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family AMC99_02576 ad3b4ff5e8641582b497656ead1b8ee8 530 Pfam PF01068 ATP dependent DNA ligase domain 203 398 2.7E-33 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 AMC99_01228 8931e840cb2d130ba2b55a9871828677 330 Pfam PF00591 Glycosyl transferase family, a/b domain 69 318 3.3E-82 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMC99_01228 8931e840cb2d130ba2b55a9871828677 330 SUPERFAMILY SSF47648 10 65 1.14E-12 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMC99_01228 8931e840cb2d130ba2b55a9871828677 330 Gene3D G3DSA:1.20.970.10 9 64 8.2E-15 T 11-10-2018 AMC99_01228 8931e840cb2d130ba2b55a9871828677 330 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 2 328 33.127 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AMC99_01228 8931e840cb2d130ba2b55a9871828677 330 SUPERFAMILY SSF52418 70 328 8.63E-84 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMC99_01228 8931e840cb2d130ba2b55a9871828677 330 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 59 1.6E-10 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMC99_01228 8931e840cb2d130ba2b55a9871828677 330 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 327 4.0E-103 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 AMC99_01228 8931e840cb2d130ba2b55a9871828677 330 Gene3D G3DSA:3.40.1030.10 66 330 1.4E-97 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 SUPERFAMILY SSF50104 5 64 2.53E-17 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 SUPERFAMILY SSF50249 130 186 2.23E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 Pfam PF09285 Elongation factor P, C-terminal 130 184 5.1E-19 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 SMART SM00841 130 185 6.2E-24 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 Gene3D G3DSA:2.40.50.140 66 127 2.6E-24 T 11-10-2018 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.0E-21 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 Gene3D G3DSA:2.40.50.140 129 186 2.7E-17 T 11-10-2018 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 2.5E-24 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 SMART SM01185 68 122 4.3E-28 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 Gene3D G3DSA:2.30.30.30 3 63 3.8E-21 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 Hamap MF_00141 Elongation factor P [efp]. 2 186 43.695 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 SUPERFAMILY SSF50249 66 130 4.16E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 186 2.4E-71 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AMC99_00993 4108b2db19859f1ab1957c8d3d3d41d5 187 PIRSF PIRSF005901 1 187 6.8E-67 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 PIRSF PIRSF000362 1 439 1.6E-133 T 11-10-2018 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type GO:0016491|GO:0055114 Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 SUPERFAMILY SSF51971 3 315 1.0E-53 T 11-10-2018 AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 PRINTS PR00419 Adrenodoxin reductase family signature 72 82 6.9E-18 T 11-10-2018 AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 PRINTS PR00419 Adrenodoxin reductase family signature 144 158 6.9E-18 T 11-10-2018 AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 PRINTS PR00419 Adrenodoxin reductase family signature 29 42 6.9E-18 T 11-10-2018 AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 6.9E-18 T 11-10-2018 AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 SUPERFAMILY SSF51971 303 439 6.83E-7 T 11-10-2018 AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 Gene3D G3DSA:3.50.50.60 46 320 1.1E-140 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 Gene3D G3DSA:3.40.50.720 4 435 1.1E-140 T 11-10-2018 AMC99_01376 240c1821f3057fa2e7ccf7a22086a1df 439 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 166 2.6E-11 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 Gene3D G3DSA:3.40.140.20 386 529 4.3E-54 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 SUPERFAMILY SSF52335 6 195 2.59E-69 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 Pfam PF02142 MGS-like domain 18 131 4.0E-26 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 SMART SM00851 18 132 1.4E-57 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 6 529 43.571 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 PIRSF PIRSF000414 1 529 9.0E-209 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 Gene3D G3DSA:3.40.50.1380 1 200 6.6E-88 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 SMART SM00798 137 454 3.4E-193 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 Gene3D G3DSA:3.40.140.20 209 362 4.0E-53 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 7 529 7.1E-200 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 453 2.3E-112 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_02444 158dc9f791c7e074f767532ca5772a4c 529 SUPERFAMILY SSF53927 214 529 1.81E-123 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_01719 2196ff407b4aeb68daf2c7641ade954d 436 Gene3D G3DSA:1.20.1530.20 11 423 1.7E-11 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMC99_01719 2196ff407b4aeb68daf2c7641ade954d 436 Pfam PF00999 Sodium/hydrogen exchanger family 17 411 7.7E-56 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMC99_02282 98a285e9852670eedd9c4a9c829d0d4b 358 Pfam PF00268 Ribonucleotide reductase, small chain 7 278 9.1E-75 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_02282 98a285e9852670eedd9c4a9c829d0d4b 358 SUPERFAMILY SSF47240 9 317 3.18E-84 T 11-10-2018 IPR009078 Ferritin-like superfamily AMC99_02282 98a285e9852670eedd9c4a9c829d0d4b 358 Gene3D G3DSA:1.10.620.20 3 306 1.7E-87 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AMC99_02282 98a285e9852670eedd9c4a9c829d0d4b 358 PIRSF PIRSF000355 1 316 3.1E-114 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_01259 98b5f450acebedfecddcc915ee1772b2 284 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 16 166 29.474 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01259 98b5f450acebedfecddcc915ee1772b2 284 Gene3D G3DSA:3.30.460.80 4 138 1.4E-35 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01259 98b5f450acebedfecddcc915ee1772b2 284 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 145 2.0E-25 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01259 98b5f450acebedfecddcc915ee1772b2 284 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 39 158 5.0E-40 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01259 98b5f450acebedfecddcc915ee1772b2 284 SUPERFAMILY SSF143243 16 191 5.75E-56 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01259 98b5f450acebedfecddcc915ee1772b2 284 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 41 159 1.1E-40 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 SMART SM01073 18 102 6.8E-30 T 11-10-2018 IPR003338 CDC48, N-terminal subdomain AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 Pfam PF02933 Cell division protein 48 (CDC48), domain 2 119 199 8.7E-15 T 11-10-2018 IPR004201 CDC48, domain 2 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:1.10.8.60 378 473 2.4E-28 T 11-10-2018 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:3.40.50.300 478 739 5.7E-91 T 11-10-2018 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 Pfam PF02359 Cell division protein 48 (CDC48), N-terminal domain 18 101 3.1E-24 T 11-10-2018 IPR003338 CDC48, N-terminal subdomain AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:3.40.50.300 203 377 3.2E-67 T 11-10-2018 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 SUPERFAMILY SSF54585 103 212 3.27E-16 T 11-10-2018 IPR029067 CDC48 domain 2-like superfamily AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 ProSitePatterns PS00674 AAA-protein family signature. 347 365 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 SUPERFAMILY SSF52540 208 471 7.84E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 SUPERFAMILY SSF50692 14 100 5.47E-23 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 SMART SM00382 516 654 7.6E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 SMART SM00382 243 379 9.5E-23 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 SMART SM01072 118 200 6.3E-11 T 11-10-2018 IPR004201 CDC48, domain 2 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 SUPERFAMILY SSF52540 478 741 3.48E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 ProSitePatterns PS00674 AAA-protein family signature. 622 640 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 247 376 1.2E-44 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 521 651 6.7E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:2.40.40.20 11 102 9.4E-25 T 11-10-2018 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 TIGRFAM TIGR01243 CDC48: AAA family ATPase, CDC48 subfamily 17 734 6.5E-273 T 11-10-2018 IPR005938 AAA ATPase, CDC48 family GO:0016787 Reactome: R-HSA-110320|Reactome: R-HSA-3371511|Reactome: R-HSA-382556|Reactome: R-HSA-532668|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5678895|Reactome: R-HSA-5689877|Reactome: R-HSA-5689896|Reactome: R-HSA-6798695|Reactome: R-HSA-8866654|Reactome: R-HSA-8876725 AMC99_02785 4f7fbbe4934d08bed908029e561a97bd 780 Gene3D G3DSA:1.10.8.60 653 726 5.7E-91 T 11-10-2018 AMC99_00206 43dab24912cd2bf1c7fc0891c4dd3a32 189 Gene3D G3DSA:3.30.240.20 103 174 3.5E-19 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily AMC99_00206 43dab24912cd2bf1c7fc0891c4dd3a32 189 Pfam PF04239 Protein of unknown function (DUF421) 112 171 2.6E-13 T 11-10-2018 IPR007353 Protein of unknown function DUF421 AMC99_00877 c6fec9c802d8615d9c6a3ac16e253b7f 246 SUPERFAMILY SSF56655 3 241 1.83E-49 T 11-10-2018 AMC99_00877 c6fec9c802d8615d9c6a3ac16e253b7f 246 Gene3D G3DSA:3.40.190.80 129 229 4.3E-20 T 11-10-2018 AMC99_00877 c6fec9c802d8615d9c6a3ac16e253b7f 246 Pfam PF00459 Inositol monophosphatase family 35 242 7.3E-31 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00877 c6fec9c802d8615d9c6a3ac16e253b7f 246 Gene3D G3DSA:3.30.540.10 3 123 1.9E-23 T 11-10-2018 AMC99_00338 8f619a4eb0317a6f913a1470aa72fdb8 123 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 43 72 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMC99_00338 8f619a4eb0317a6f913a1470aa72fdb8 123 SUPERFAMILY SSF51230 3 121 1.7E-42 T 11-10-2018 IPR011053 Single hybrid motif AMC99_00338 8f619a4eb0317a6f913a1470aa72fdb8 123 Pfam PF01597 Glycine cleavage H-protein 3 121 4.1E-42 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AMC99_00338 8f619a4eb0317a6f913a1470aa72fdb8 123 Gene3D G3DSA:2.40.50.100 1 122 1.4E-47 T 11-10-2018 AMC99_00338 8f619a4eb0317a6f913a1470aa72fdb8 123 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 3 121 37.057 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMC99_00338 8f619a4eb0317a6f913a1470aa72fdb8 123 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 119 5.3E-45 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 AMC99_01169 983f3889e59638070103cdda06fd1970 761 Pfam PF00575 S1 RNA binding domain 624 676 1.0E-4 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_01169 983f3889e59638070103cdda06fd1970 761 Gene3D G3DSA:2.40.50.140 626 712 1.9E-9 T 11-10-2018 AMC99_01169 983f3889e59638070103cdda06fd1970 761 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 116 695 1.4E-127 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AMC99_01169 983f3889e59638070103cdda06fd1970 761 SUPERFAMILY SSF50249 623 704 2.47E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01169 983f3889e59638070103cdda06fd1970 761 Pfam PF00773 RNB domain 247 564 3.7E-89 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMC99_01169 983f3889e59638070103cdda06fd1970 761 SMART SM00955 247 567 3.5E-148 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 AMC99_01169 983f3889e59638070103cdda06fd1970 761 Hamap MF_01895 Ribonuclease R [rnr]. 21 706 46.077 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMC99_01169 983f3889e59638070103cdda06fd1970 761 ProSitePatterns PS01175 Ribonuclease II family signature. 534 558 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site AMC99_01169 983f3889e59638070103cdda06fd1970 761 TIGRFAM TIGR02063 RNase_R: ribonuclease R 1 704 2.2E-181 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMC99_01169 983f3889e59638070103cdda06fd1970 761 SUPERFAMILY SSF50249 215 622 3.31E-127 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 Pfam PF00271 Helicase conserved C-terminal domain 463 572 5.8E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 SUPERFAMILY SSF50249 12 177 1.34E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 SMART SM00487 254 445 2.5E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 Gene3D G3DSA:2.40.50.140 49 145 1.1E-6 T 11-10-2018 AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 Gene3D G3DSA:3.40.50.300 443 614 3.5E-49 T 11-10-2018 AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 SMART SM00490 490 573 1.6E-20 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 Pfam PF00270 DEAD/DEAH box helicase 282 417 1.3E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 Pfam PF17191 RecG wedge domain 17 173 9.3E-10 T 11-10-2018 IPR033454 RecG, wedge domain AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 SUPERFAMILY SSF52540 306 581 1.31E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00967 7f713cf5793cf847c91a7ec90a3a98f5 686 Gene3D G3DSA:3.40.50.300 201 435 1.5E-76 T 11-10-2018 AMC99_01599 c423e74b6fea3c53d451fdb523d9ee51 419 Pfam PF12867 DinB superfamily 19 147 4.2E-10 T 11-10-2018 IPR024775 DinB-like domain AMC99_01599 c423e74b6fea3c53d451fdb523d9ee51 419 Gene3D G3DSA:3.90.1580.10 168 419 2.0E-34 T 11-10-2018 AMC99_01599 c423e74b6fea3c53d451fdb523d9ee51 419 SUPERFAMILY SSF109854 13 145 3.3E-6 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMC99_01599 c423e74b6fea3c53d451fdb523d9ee51 419 SUPERFAMILY SSF56436 179 418 8.24E-62 T 11-10-2018 IPR016187 C-type lectin fold AMC99_01599 c423e74b6fea3c53d451fdb523d9ee51 419 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 16 416 2.6E-157 T 11-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 AMC99_01599 c423e74b6fea3c53d451fdb523d9ee51 419 Pfam PF03781 Sulfatase-modifying factor enzyme 1 180 417 3.8E-26 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 AMC99_00948 99c46062b4995b65933330104c104d4e 147 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 128 5.5E-32 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMC99_00948 99c46062b4995b65933330104c104d4e 147 SUPERFAMILY SSF52540 21 133 9.94E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00948 99c46062b4995b65933330104c104d4e 147 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 136 4.7E-30 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMC99_00948 99c46062b4995b65933330104c104d4e 147 Gene3D G3DSA:3.40.50.300 1 144 8.5E-35 T 11-10-2018 AMC99_01143 6e30d3b270b241135698a3328f6fc84d 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 19 281 9.2E-74 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMC99_01143 6e30d3b270b241135698a3328f6fc84d 286 Gene3D G3DSA:3.40.1010.10 5 124 2.0E-40 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMC99_01143 6e30d3b270b241135698a3328f6fc84d 286 SUPERFAMILY SSF53790 17 233 2.75E-75 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMC99_01143 6e30d3b270b241135698a3328f6fc84d 286 PIRSF PIRSF005917 8 286 9.3E-95 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMC99_01143 6e30d3b270b241135698a3328f6fc84d 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 18 235 36.534 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 AMC99_01143 6e30d3b270b241135698a3328f6fc84d 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 95 106 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 AMC99_01143 6e30d3b270b241135698a3328f6fc84d 286 Gene3D G3DSA:3.30.950.10 125 240 1.1E-33 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMC99_01143 6e30d3b270b241135698a3328f6fc84d 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 19 216 1.3E-23 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMC99_02241 6ea6274c20529d5a89c076729127ea73 734 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 107 616 3.2E-164 T 11-10-2018 AMC99_02241 6ea6274c20529d5a89c076729127ea73 734 Pfam PF00905 Penicillin binding protein transpeptidase domain 354 570 1.4E-29 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_02241 6ea6274c20529d5a89c076729127ea73 734 Gene3D G3DSA:1.10.3810.10 88 285 1.5E-67 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_02241 6ea6274c20529d5a89c076729127ea73 734 Pfam PF00912 Transglycosylase 100 269 1.9E-56 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_02241 6ea6274c20529d5a89c076729127ea73 734 SUPERFAMILY SSF56601 251 634 6.18E-105 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_02241 6ea6274c20529d5a89c076729127ea73 734 Gene3D G3DSA:3.40.710.10 286 641 1.3E-99 T 11-10-2018 AMC99_02241 6ea6274c20529d5a89c076729127ea73 734 SUPERFAMILY SSF53955 85 282 3.09E-67 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMC99_01904 b13a05007b555c009c9c88efff8d77dc 417 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 1.4E-76 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMC99_01904 b13a05007b555c009c9c88efff8d77dc 417 Gene3D G3DSA:3.40.50.1100 65 161 1.3E-110 T 11-10-2018 AMC99_01904 b13a05007b555c009c9c88efff8d77dc 417 Gene3D G3DSA:3.40.50.1100 22 321 1.3E-110 T 11-10-2018 AMC99_01904 b13a05007b555c009c9c88efff8d77dc 417 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 36 411 7.8E-130 T 11-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 AMC99_01904 b13a05007b555c009c9c88efff8d77dc 417 SUPERFAMILY SSF53686 18 366 1.7E-96 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_01904 b13a05007b555c009c9c88efff8d77dc 417 Pfam PF01842 ACT domain 340 405 3.0E-8 T 11-10-2018 IPR002912 ACT domain AMC99_01904 b13a05007b555c009c9c88efff8d77dc 417 Gene3D G3DSA:3.30.70.260 338 415 3.6E-6 T 11-10-2018 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 ProSitePatterns PS00737 Thiolases signature 2. 361 377 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Gene3D G3DSA:3.40.47.10 126 409 3.8E-125 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 413 1.3E-111 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 SUPERFAMILY SSF53901 3 292 6.86E-58 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Pfam PF00108 Thiolase, N-terminal domain 5 236 1.0E-42 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 ProSitePatterns PS00099 Thiolases active site. 396 409 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Gene3D G3DSA:3.40.47.10 6 312 3.8E-125 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 PIRSF PIRSF000429 1 416 1.6E-99 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 Pfam PF02803 Thiolase, C-terminal domain 292 414 7.9E-42 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMC99_02175 e4f30ff7cdf90afbc9f3c8a9e02444f2 420 SUPERFAMILY SSF53901 293 414 1.14E-40 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01785 fe3c37ef3c17a08049c04adc07fd8bf0 486 Pfam PF02646 RmuC family 161 448 1.0E-93 T 11-10-2018 IPR003798 DNA recombination RmuC AMC99_01658 572e6751d08032a33045ebe89b942fad 535 Gene3D G3DSA:2.40.10.10 147 256 1.5E-15 T 11-10-2018 AMC99_01658 572e6751d08032a33045ebe89b942fad 535 PRINTS PR00834 HtrA/DegQ protease family signature 109 129 4.6E-8 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_01658 572e6751d08032a33045ebe89b942fad 535 PRINTS PR00834 HtrA/DegQ protease family signature 195 212 4.6E-8 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_01658 572e6751d08032a33045ebe89b942fad 535 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 4.6E-8 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_01658 572e6751d08032a33045ebe89b942fad 535 PRINTS PR00834 HtrA/DegQ protease family signature 82 94 4.6E-8 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_01658 572e6751d08032a33045ebe89b942fad 535 SUPERFAMILY SSF50494 47 252 1.3E-29 T 11-10-2018 IPR009003 Peptidase S1, PA clan AMC99_01658 572e6751d08032a33045ebe89b942fad 535 Pfam PF13365 Trypsin-like peptidase domain 74 224 1.5E-18 T 11-10-2018 AMC99_01658 572e6751d08032a33045ebe89b942fad 535 Gene3D G3DSA:2.40.10.10 41 136 5.7E-12 T 11-10-2018 AMC99_00056 45c43262a4328aac341b40732ee6cc80 608 SMART SM00487 143 325 6.2E-24 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_00056 45c43262a4328aac341b40732ee6cc80 608 Gene3D G3DSA:3.40.50.300 364 602 4.8E-41 T 11-10-2018 AMC99_00056 45c43262a4328aac341b40732ee6cc80 608 Pfam PF00271 Helicase conserved C-terminal domain 439 551 4.5E-11 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00056 45c43262a4328aac341b40732ee6cc80 608 SUPERFAMILY SSF52540 261 587 1.29E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00056 45c43262a4328aac341b40732ee6cc80 608 SUPERFAMILY SSF52540 131 347 5.7E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00056 45c43262a4328aac341b40732ee6cc80 608 Pfam PF00176 SNF2 family N-terminal domain 166 383 1.0E-37 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMC99_00056 45c43262a4328aac341b40732ee6cc80 608 Gene3D G3DSA:3.40.50.10810 119 363 3.2E-61 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily AMC99_00056 45c43262a4328aac341b40732ee6cc80 608 SMART SM00490 466 551 2.1E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_01286 5df2f4027ca2b38242e79660c5f36404 151 SUPERFAMILY SSF54637 16 141 3.47E-19 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_01286 5df2f4027ca2b38242e79660c5f36404 151 Gene3D G3DSA:3.10.129.10 4 149 1.1E-22 T 11-10-2018 AMC99_01286 5df2f4027ca2b38242e79660c5f36404 151 Pfam PF03061 Thioesterase superfamily 61 140 1.7E-7 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_02580 7dd385cbef3f5d1e809b2c4bf6cc010f 67 Pfam PF06698 Protein of unknown function (DUF1192) 3 63 5.0E-21 T 11-10-2018 IPR009579 Protein of unknown function DUF1192 AMC99_00660 e876767bb21ef9ac8915514a7943eb88 237 Gene3D G3DSA:3.30.70.2970 43 151 1.2E-58 T 11-10-2018 AMC99_00660 e876767bb21ef9ac8915514a7943eb88 237 Pfam PF04402 Protein of unknown function (DUF541) 33 234 4.9E-41 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AMC99_00660 e876767bb21ef9ac8915514a7943eb88 237 Gene3D G3DSA:3.30.110.170 39 235 1.2E-58 T 11-10-2018 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.40.50.20 1 116 1.5E-49 T 11-10-2018 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.40.50.1380 972 1107 1.0E-33 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF52440 590 712 3.02E-46 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 425 574 8.1E-41 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1085 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF56059 128 400 2.12E-104 T 11-10-2018 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.30.470.20 702 971 1.2E-113 T 11-10-2018 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF48108 395 577 7.59E-44 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1105 13.375 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.30.470.20 119 402 2.5E-126 T 11-10-2018 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:1.10.1030.10 403 578 9.8E-41 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Pfam PF02142 MGS-like domain 992 1077 2.1E-16 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Gene3D G3DSA:3.40.50.20 587 699 1.1E-47 T 11-10-2018 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 710 911 3.2E-34 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 1.8E-69 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 746 760 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF56059 710 969 1.43E-101 T 11-10-2018 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 SMART SM00851 991 1077 4.3E-29 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 SMART SM01096 422 574 9.3E-62 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF52335 971 1106 8.77E-38 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1097 13.031 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 SUPERFAMILY SSF52440 1 127 2.88E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.4E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.4E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.4E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.4E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 2.4E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.4E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.4E-65 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_01080 c926326abc25788cd7f4710efefc7ffe 1107 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 875 882 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_02163 616159877e48d3bb0fff414134c33a40 615 Pfam PF03235 Protein of unknown function DUF262 14 258 1.1E-25 T 11-10-2018 IPR004919 Domain of unknown function DUF262 AMC99_00547 b748c33c0cb25972b495c6802c7600cd 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 124 3.2E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_00547 b748c33c0cb25972b495c6802c7600cd 141 Gene3D G3DSA:3.10.180.10 1 141 8.8E-58 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00547 b748c33c0cb25972b495c6802c7600cd 141 SUPERFAMILY SSF54593 1 128 2.82E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00012 30454555c9274f55e5961d36ad290e3a 309 SUPERFAMILY SSF55073 147 297 2.51E-26 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_00012 30454555c9274f55e5961d36ad290e3a 309 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 288 3.9E-24 T 11-10-2018 IPR000160 GGDEF domain AMC99_00012 30454555c9274f55e5961d36ad290e3a 309 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 294 2.0E-16 T 11-10-2018 IPR000160 GGDEF domain AMC99_00012 30454555c9274f55e5961d36ad290e3a 309 SMART SM00267 131 296 1.5E-19 T 11-10-2018 IPR000160 GGDEF domain AMC99_00012 30454555c9274f55e5961d36ad290e3a 309 Gene3D G3DSA:3.30.70.270 141 300 7.6E-31 T 11-10-2018 AMC99_02743 acbe5447d08dc4dd8c57f00301e63d97 109 SUPERFAMILY SSF81901 14 79 1.02E-7 T 11-10-2018 AMC99_02743 acbe5447d08dc4dd8c57f00301e63d97 109 Gene3D G3DSA:1.25.40.10 23 104 1.1E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02743 acbe5447d08dc4dd8c57f00301e63d97 109 SMART SM00671 35 71 0.0029 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 SUPERFAMILY SSF142984 242 327 2.09E-23 T 11-10-2018 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 SMART SM00928 332 377 5.2E-25 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 SUPERFAMILY SSF140490 328 422 8.37E-36 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 335 416 2.9E-29 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 Gene3D G3DSA:3.40.50.11540 52 232 3.9E-82 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 Pfam PF10531 SLBB domain 244 293 3.0E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 418 6.9E-197 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 Gene3D G3DSA:3.10.20.600 233 329 3.8E-39 T 11-10-2018 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 SUPERFAMILY SSF142019 3 241 1.14E-85 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 345 356 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 220 2.8E-49 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 168 183 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01255 de8f8b5718fdbb26c4239760f7d05bdf 430 Gene3D G3DSA:1.20.1440.230 330 429 8.2E-38 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_02797 9342cdcb46c9f340a45253d673f85d69 125 SUPERFAMILY SSF48300 3 61 2.22E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02797 9342cdcb46c9f340a45253d673f85d69 125 Gene3D G3DSA:3.30.1390.10 55 125 2.0E-30 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_02797 9342cdcb46c9f340a45253d673f85d69 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 6.3E-45 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02797 9342cdcb46c9f340a45253d673f85d69 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 125 23.553 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02797 9342cdcb46c9f340a45253d673f85d69 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 125 1.0E-16 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02797 9342cdcb46c9f340a45253d673f85d69 125 SUPERFAMILY SSF54736 54 125 4.88E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_02797 9342cdcb46c9f340a45253d673f85d69 125 Gene3D G3DSA:1.20.5.710 3 54 2.6E-18 T 11-10-2018 AMC99_02797 9342cdcb46c9f340a45253d673f85d69 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 7.9E-29 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02797 9342cdcb46c9f340a45253d673f85d69 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 51 1.2E-16 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01111 e558c84d54a9dccdefd68fd3c9bdf825 64 SUPERFAMILY SSF47413 2 60 2.95E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_01111 e558c84d54a9dccdefd68fd3c9bdf825 64 Gene3D G3DSA:1.10.260.40 1 63 1.4E-25 T 11-10-2018 AMC99_01111 e558c84d54a9dccdefd68fd3c9bdf825 64 Pfam PF01381 Helix-turn-helix 5 58 1.7E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_01111 e558c84d54a9dccdefd68fd3c9bdf825 64 SMART SM00530 4 59 2.9E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_02384 0ca33d567d91755ca6e4ca4286cfce36 205 SUPERFAMILY SSF53098 18 192 1.61E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMC99_02384 0ca33d567d91755ca6e4ca4286cfce36 205 Pfam PF01612 3'-5' exonuclease 18 170 5.2E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_02384 0ca33d567d91755ca6e4ca4286cfce36 205 SMART SM00474 1 170 8.1E-30 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_02384 0ca33d567d91755ca6e4ca4286cfce36 205 Gene3D G3DSA:3.30.420.10 6 190 1.1E-40 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMC99_01692 dd68a9e1590bbcba387ff87201c8dad7 126 Pfam PF04024 PspC domain 7 64 2.0E-14 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMC99_01692 dd68a9e1590bbcba387ff87201c8dad7 126 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 6 125 8.8E-39 T 11-10-2018 IPR014320 Phage shock protein, PspC AMC99_00665 147ce220e65289434968d97b86fa5b43 113 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 23 107 5.0E-40 T 11-10-2018 IPR010951 Chorismate mutase, bacteria AMC99_00665 147ce220e65289434968d97b86fa5b43 113 SUPERFAMILY SSF48600 23 106 5.19E-24 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMC99_00665 147ce220e65289434968d97b86fa5b43 113 SMART SM00830 27 107 9.0E-22 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMC99_00665 147ce220e65289434968d97b86fa5b43 113 Gene3D G3DSA:1.20.59.10 14 113 1.1E-37 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMC99_00665 147ce220e65289434968d97b86fa5b43 113 Pfam PF01817 Chorismate mutase type II 27 102 1.6E-18 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMC99_01770 7be1de947a9fd3515c592b2a18901d05 335 PIRSF PIRSF005572 1 335 6.5E-80 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMC99_01770 7be1de947a9fd3515c592b2a18901d05 335 Gene3D G3DSA:3.40.640.10 1 216 8.2E-52 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_01770 7be1de947a9fd3515c592b2a18901d05 335 SUPERFAMILY SSF53383 6 329 8.53E-60 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01770 7be1de947a9fd3515c592b2a18901d05 335 Pfam PF00266 Aminotransferase class-V 9 325 3.1E-36 T 11-10-2018 IPR000192 Aminotransferase class V domain AMC99_01770 7be1de947a9fd3515c592b2a18901d05 335 Gene3D G3DSA:3.90.1150.10 224 335 1.9E-26 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_02675 c28cb9540bc7e484925051c825371165 471 SUPERFAMILY SSF53738 4 131 1.33E-37 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 Gene3D G3DSA:3.40.120.10 255 372 1.3E-35 T 11-10-2018 AMC99_02675 c28cb9540bc7e484925051c825371165 471 SUPERFAMILY SSF55957 371 458 2.62E-19 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 155 257 2.5E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 SUPERFAMILY SSF53738 168 258 9.81E-25 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 11 134 2.1E-33 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 99 108 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 Gene3D G3DSA:3.40.120.10 176 253 4.4E-25 T 11-10-2018 AMC99_02675 c28cb9540bc7e484925051c825371165 471 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 368 4.1E-21 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 5.4E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 208 221 5.4E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 98 112 5.4E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.4E-24 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 SUPERFAMILY SSF53738 261 368 8.63E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_02675 c28cb9540bc7e484925051c825371165 471 Gene3D G3DSA:3.30.310.50 373 462 1.1E-21 T 11-10-2018 AMC99_02675 c28cb9540bc7e484925051c825371165 471 Gene3D G3DSA:3.40.120.10 5 151 1.9E-47 T 11-10-2018 AMC99_02675 c28cb9540bc7e484925051c825371165 471 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 458 1.5E-11 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 SUPERFAMILY SSF57716 227 280 1.43E-12 T 11-10-2018 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 SUPERFAMILY SSF46946 140 230 4.19E-27 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 Gene3D G3DSA:1.10.8.50 141 280 2.4E-45 T 11-10-2018 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 10 279 1.5E-74 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 SUPERFAMILY SSF81624 11 146 6.93E-37 T 11-10-2018 IPR035937 MutM-like, N-terminal AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 10 122 9.7E-32 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 Pfam PF06827 Zinc finger found in FPG and IleRS 259 280 3.2E-7 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 SMART SM00898 11 123 4.3E-45 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 139 228 9.2E-24 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 Gene3D G3DSA:3.20.190.10 11 137 2.8E-34 T 11-10-2018 IPR035937 MutM-like, N-terminal AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 10 280 40.482 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AMC99_00240 9e703849201a5bf003ce5d5e83dcf727 280 SMART SM01232 139 231 6.7E-46 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AMC99_01283 9b93baeaf2101edd29aa5c553848accc 450 Pfam PF01943 Polysaccharide biosynthesis protein 19 285 2.5E-7 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AMC99_01601 b7614f7ba3c3d4b5773dd82d5ac6b02e 457 Pfam PF01474 Class-II DAHP synthetase family 5 442 2.0E-196 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMC99_01601 b7614f7ba3c3d4b5773dd82d5ac6b02e 457 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 447 2.5E-211 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 AMC99_01601 b7614f7ba3c3d4b5773dd82d5ac6b02e 457 SUPERFAMILY SSF51569 3 446 1.46E-198 T 11-10-2018 AMC99_01720 9ec86e99bae2dd21c26be895c3a7342f 267 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 237 5.4E-66 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AMC99_01720 9ec86e99bae2dd21c26be895c3a7342f 267 Pfam PF01259 SAICAR synthetase 7 235 1.1E-62 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_01720 9ec86e99bae2dd21c26be895c3a7342f 267 Gene3D G3DSA:3.30.470.20 85 224 8.2E-94 T 11-10-2018 AMC99_01720 9ec86e99bae2dd21c26be895c3a7342f 267 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_01720 9ec86e99bae2dd21c26be895c3a7342f 267 Gene3D G3DSA:3.30.200.20 7 235 8.2E-94 T 11-10-2018 AMC99_01720 9ec86e99bae2dd21c26be895c3a7342f 267 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 32.125 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_01720 9ec86e99bae2dd21c26be895c3a7342f 267 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_01720 9ec86e99bae2dd21c26be895c3a7342f 267 SUPERFAMILY SSF56104 4 236 1.77E-78 T 11-10-2018 AMC99_01975 d335cdb4da52b6e613410984576eb6aa 603 SUPERFAMILY SSF52540 171 569 4.94E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01975 d335cdb4da52b6e613410984576eb6aa 603 Pfam PF01935 Domain of unknown function DUF87 200 434 5.8E-50 T 11-10-2018 IPR002789 Helicase HerA, central domain AMC99_01975 d335cdb4da52b6e613410984576eb6aa 603 Gene3D G3DSA:3.40.50.300 185 349 5.1E-17 T 11-10-2018 AMC99_01975 d335cdb4da52b6e613410984576eb6aa 603 Gene3D G3DSA:3.40.50.300 391 579 7.4E-45 T 11-10-2018 AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 Gene3D G3DSA:1.10.10.10 4 67 2.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 41 8.6E-18 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 14 30 8.6E-18 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 60 8.6E-18 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 15 61 2.4E-17 T 11-10-2018 AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 SUPERFAMILY SSF54909 77 157 1.74E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 32 58 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 Gene3D G3DSA:3.30.70.920 68 151 1.2E-24 T 11-10-2018 AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 Pfam PF01037 Lrp/AsnC ligand binding domain 81 154 2.0E-23 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 SUPERFAMILY SSF46785 13 73 4.0E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02260 cbc4157be9dc3d3f98c1af371e2f85fb 160 SMART SM00344 14 123 9.6E-46 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMC99_02037 b944abdec6dccfb494cdd3ac1c77c23b 204 Pfam PF01081 KDPG and KHG aldolase 4 191 3.1E-74 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMC99_02037 b944abdec6dccfb494cdd3ac1c77c23b 204 SUPERFAMILY SSF51569 3 202 1.39E-62 T 11-10-2018 AMC99_02037 b944abdec6dccfb494cdd3ac1c77c23b 204 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMC99_02037 b944abdec6dccfb494cdd3ac1c77c23b 204 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMC99_02037 b944abdec6dccfb494cdd3ac1c77c23b 204 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 4 201 5.7E-70 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 AMC99_02037 b944abdec6dccfb494cdd3ac1c77c23b 204 Gene3D G3DSA:3.20.20.70 1 204 1.9E-69 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 Gene3D G3DSA:3.40.120.10 257 340 1.9E-66 T 11-10-2018 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 SUPERFAMILY SSF55957 359 444 1.09E-21 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 442 2.3E-182 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 1.3E-42 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 Gene3D G3DSA:3.30.310.50 371 445 1.1E-24 T 11-10-2018 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 Gene3D G3DSA:3.40.120.10 2 172 2.8E-48 T 11-10-2018 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 SUPERFAMILY SSF53738 258 364 5.89E-33 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 444 45.832 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 SUPERFAMILY SSF53738 156 256 2.12E-27 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 SUPERFAMILY SSF53738 2 181 1.22E-48 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.3E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 1.3E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.3E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 Gene3D G3DSA:3.40.120.10 175 363 1.9E-66 T 11-10-2018 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 441 1.2E-15 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 7.5E-34 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_00304 ce355e4978952189202fc33faa0bf3b3 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.9E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMC99_01010 8d87153498feca109bec067483635b33 290 SUPERFAMILY SSF51621 24 286 1.18E-92 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMC99_01010 8d87153498feca109bec067483635b33 290 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 24 286 40.188 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMC99_01010 8d87153498feca109bec067483635b33 290 PIRSF PIRSF000388 16 289 5.4E-99 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMC99_01010 8d87153498feca109bec067483635b33 290 Gene3D G3DSA:3.20.20.60 22 290 2.3E-97 T 11-10-2018 AMC99_01010 8d87153498feca109bec067483635b33 290 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 37 287 9.1E-91 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMC99_01010 8d87153498feca109bec067483635b33 290 Pfam PF02548 Ketopantoate hydroxymethyltransferase 24 281 7.7E-101 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AMC99_00913 9e9850fda2d9df728057966f39df81db 259 Pfam PF09955 Predicted integral membrane protein (DUF2189) 68 191 6.2E-31 T 11-10-2018 IPR018692 Predicted integral membrane protein DUF2189 AMC99_00327 93cfcf689e7365d4f05397a691477ea8 113 SUPERFAMILY SSF46894 5 98 2.83E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_00327 93cfcf689e7365d4f05397a691477ea8 113 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 97 3.1E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00327 93cfcf689e7365d4f05397a691477ea8 113 SMART SM00862 23 98 1.4E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00327 93cfcf689e7365d4f05397a691477ea8 113 Gene3D G3DSA:1.10.10.10 3 101 2.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00641 6dd21fb9db5c7c22040ec23630c736e8 600 SUPERFAMILY SSF47384 365 427 9.22E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_00641 6dd21fb9db5c7c22040ec23630c736e8 600 SMART SM00388 359 427 9.8E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_00641 6dd21fb9db5c7c22040ec23630c736e8 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 366 427 4.3E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_00641 6dd21fb9db5c7c22040ec23630c736e8 600 Gene3D G3DSA:3.30.565.10 425 513 2.3E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00641 6dd21fb9db5c7c22040ec23630c736e8 600 Gene3D G3DSA:1.10.287.130 367 424 2.3E-7 T 11-10-2018 AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 10 442 8.2E-139 T 11-10-2018 AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 Pfam PF04055 Radical SAM superfamily 156 329 1.2E-25 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 SMART SM00729 151 371 6.6E-58 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 Pfam PF01938 TRAM domain 385 441 7.3E-7 T 11-10-2018 IPR002792 TRAM domain AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 8 442 69.29 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 439 8.2E-143 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 Gene3D G3DSA:3.80.30.20 150 382 4.0E-82 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 Gene3D G3DSA:3.40.50.12160 9 140 4.4E-32 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 SUPERFAMILY SSF102114 131 388 4.19E-58 T 11-10-2018 AMC99_01616 2c3e999daf727bdd9e48351470919c29 447 Pfam PF00919 Uncharacterized protein family UPF0004 11 109 2.9E-27 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AMC99_01476 d151e43e0089f16ee4afdfc74b2d941e 415 Pfam PF04055 Radical SAM superfamily 137 322 2.4E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_01476 d151e43e0089f16ee4afdfc74b2d941e 415 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 29 397 72.114 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AMC99_01476 d151e43e0089f16ee4afdfc74b2d941e 415 Gene3D G3DSA:1.10.150.530 16 93 1.6E-15 T 11-10-2018 AMC99_01476 d151e43e0089f16ee4afdfc74b2d941e 415 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 27 397 4.0E-118 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 AMC99_01476 d151e43e0089f16ee4afdfc74b2d941e 415 PIRSF PIRSF006004 23 411 2.6E-137 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 AMC99_01476 d151e43e0089f16ee4afdfc74b2d941e 415 Gene3D G3DSA:3.20.20.70 95 382 2.5E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01476 d151e43e0089f16ee4afdfc74b2d941e 415 SUPERFAMILY SSF102114 127 351 1.57E-10 T 11-10-2018 AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 Gene3D G3DSA:3.20.20.450 517 769 5.0E-92 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 SMART SM00267 331 503 2.6E-57 T 11-10-2018 IPR000160 GGDEF domain AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 213 337 6.9E-12 T 11-10-2018 IPR000014 PAS domain AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 Pfam PF08448 PAS fold 223 333 5.9E-11 T 11-10-2018 IPR013656 PAS fold-4 AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 Pfam PF00563 EAL domain 520 751 1.2E-68 T 11-10-2018 IPR001633 EAL domain AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 SUPERFAMILY SSF55785 219 333 1.12E-15 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 SUPERFAMILY SSF141868 520 763 3.27E-83 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 Gene3D G3DSA:3.30.450.20 211 339 1.1E-16 T 11-10-2018 AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 341 499 3.9E-39 T 11-10-2018 IPR000160 GGDEF domain AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 Pfam PF00990 Diguanylate cyclase, GGDEF domain 342 497 3.1E-45 T 11-10-2018 IPR000160 GGDEF domain AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 SUPERFAMILY SSF55073 347 500 1.73E-44 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 Gene3D G3DSA:3.30.70.270 340 516 2.3E-54 T 11-10-2018 AMC99_01726 71f71b1d2d32540faea609d5e6cbb138 770 SMART SM00052 513 756 3.1E-106 T 11-10-2018 IPR001633 EAL domain AMC99_00899 d7d5b1f9cb546a2453a8c2f99fbc556c 406 SUPERFAMILY SSF53383 3 399 4.12E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_00899 d7d5b1f9cb546a2453a8c2f99fbc556c 406 Pfam PF00155 Aminotransferase class I and II 47 391 1.2E-82 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_00899 d7d5b1f9cb546a2453a8c2f99fbc556c 406 Gene3D G3DSA:3.90.1150.10 14 388 1.0E-167 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_00899 d7d5b1f9cb546a2453a8c2f99fbc556c 406 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 245 254 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMC99_00899 d7d5b1f9cb546a2453a8c2f99fbc556c 406 Gene3D G3DSA:3.40.640.10 63 298 1.0E-167 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_00899 d7d5b1f9cb546a2453a8c2f99fbc556c 406 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 2 402 1.5E-201 T 11-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 AMC99_00349 ed9ac44443970a89466597635eee6fed 340 Pfam PF13377 Periplasmic binding protein-like domain 179 337 5.1E-25 T 11-10-2018 AMC99_00349 ed9ac44443970a89466597635eee6fed 340 Gene3D G3DSA:3.40.50.2300 84 317 9.8E-48 T 11-10-2018 AMC99_00349 ed9ac44443970a89466597635eee6fed 340 SMART SM00354 7 78 5.9E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMC99_00349 ed9ac44443970a89466597635eee6fed 340 Gene3D G3DSA:1.10.260.40 2 64 6.9E-20 T 11-10-2018 AMC99_00349 ed9ac44443970a89466597635eee6fed 340 SUPERFAMILY SSF53822 82 321 3.14E-42 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMC99_00349 ed9ac44443970a89466597635eee6fed 340 SUPERFAMILY SSF47413 7 65 9.24E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_00349 ed9ac44443970a89466597635eee6fed 340 Gene3D G3DSA:3.40.50.2300 171 301 9.8E-48 T 11-10-2018 AMC99_00349 ed9ac44443970a89466597635eee6fed 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 54 1.1E-16 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 PIRSF PIRSF001369 37 428 9.5E-164 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 6.7E-128 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 422 9.5E-222 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 Gene3D G3DSA:1.10.230.10 268 376 2.2E-142 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 Gene3D G3DSA:2.20.28.60 3 50 1.7E-21 T 11-10-2018 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 Gene3D G3DSA:1.10.580.10 57 411 2.2E-142 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 SUPERFAMILY SSF48256 5 428 4.19E-164 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 241 269 1.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 296 316 1.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 219 234 1.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 165 178 1.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 359 375 1.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMC99_01235 298ebf9d1f3704bb2e2948b7407e3829 428 PRINTS PR00143 Citrate synthase signature 379 393 1.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 SMART SM00853 422 566 8.6E-52 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 SMART SM01340 208 330 9.3E-49 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 SUPERFAMILY SSF55874 2 209 1.57E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 SUPERFAMILY SSF54211 190 330 5.31E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 606 26.321 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 Pfam PF08676 MutL C terminal dimerisation domain 418 566 1.9E-44 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 Gene3D G3DSA:2.30.42.20 424 603 9.7E-57 T 11-10-2018 AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 310 9.1E-84 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 Gene3D G3DSA:3.30.565.10 3 209 4.4E-64 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 Gene3D G3DSA:3.30.230.10 214 329 6.2E-29 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 SUPERFAMILY SSF118116 417 608 8.11E-58 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 329 6.4E-31 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 Gene3D G3DSA:3.30.1370.100 466 561 9.7E-57 T 11-10-2018 AMC99_01100 205d52b5cf58cd83ef1b94be26817050 609 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 120 1.9E-11 T 11-10-2018 AMC99_01873 b86eef925416343c1f39d92993bef53a 314 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 302 1.3E-86 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMC99_01873 b86eef925416343c1f39d92993bef53a 314 Pfam PF01795 MraW methylase family 5 302 6.8E-91 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMC99_01873 b86eef925416343c1f39d92993bef53a 314 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 305 36.333 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMC99_01873 b86eef925416343c1f39d92993bef53a 314 SUPERFAMILY SSF81799 115 211 2.22E-31 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AMC99_01873 b86eef925416343c1f39d92993bef53a 314 SUPERFAMILY SSF53335 6 304 8.28E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01873 b86eef925416343c1f39d92993bef53a 314 PIRSF PIRSF004486 2 306 2.2E-96 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AMC99_01873 b86eef925416343c1f39d92993bef53a 314 Gene3D G3DSA:1.10.150.170 113 212 1.0E-98 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AMC99_01873 b86eef925416343c1f39d92993bef53a 314 Gene3D G3DSA:3.40.50.150 7 301 1.0E-98 T 11-10-2018 AMC99_02063 c672de061eca0a943e4039b856ad15a7 694 Gene3D G3DSA:2.40.170.20 174 693 9.1E-112 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_02063 c672de061eca0a943e4039b856ad15a7 694 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 691 1.1E-90 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 AMC99_02063 c672de061eca0a943e4039b856ad15a7 694 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 162 1.6E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_02063 c672de061eca0a943e4039b856ad15a7 694 SUPERFAMILY SSF56935 29 693 3.05E-123 T 11-10-2018 AMC99_02063 c672de061eca0a943e4039b856ad15a7 694 Pfam PF00593 TonB dependent receptor 235 692 8.0E-50 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02063 c672de061eca0a943e4039b856ad15a7 694 Gene3D G3DSA:2.170.130.10 49 173 2.3E-37 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02078 d71305784e867254247fee75b13df942 541 Gene3D G3DSA:3.40.50.12780 6 418 1.5E-88 T 11-10-2018 AMC99_02078 d71305784e867254247fee75b13df942 541 SUPERFAMILY SSF56801 19 519 1.13E-120 T 11-10-2018 AMC99_02078 d71305784e867254247fee75b13df942 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 509 3.7E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_02078 d71305784e867254247fee75b13df942 541 Pfam PF00501 AMP-binding enzyme 25 425 8.7E-79 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_02078 d71305784e867254247fee75b13df942 541 Gene3D G3DSA:3.30.300.30 419 519 2.2E-25 T 11-10-2018 AMC99_02078 d71305784e867254247fee75b13df942 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_01314 6610ea4c4cbdd041b6416244b773e637 254 SUPERFAMILY SSF52141 103 248 3.6E-15 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_01314 6610ea4c4cbdd041b6416244b773e637 254 Pfam PF03167 Uracil DNA glycosylase superfamily 107 202 1.6E-9 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_01314 6610ea4c4cbdd041b6416244b773e637 254 Gene3D G3DSA:3.40.470.10 96 253 4.2E-13 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_01930 7b168fe39b630b2fd704cfec77532d90 158 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMC99_01930 7b168fe39b630b2fd704cfec77532d90 158 Gene3D G3DSA:1.10.10.10 3 151 6.0E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01930 7b168fe39b630b2fd704cfec77532d90 158 SMART SM00347 35 135 1.5E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01930 7b168fe39b630b2fd704cfec77532d90 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 1.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01930 7b168fe39b630b2fd704cfec77532d90 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 1.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01930 7b168fe39b630b2fd704cfec77532d90 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 1.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01930 7b168fe39b630b2fd704cfec77532d90 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 1.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01930 7b168fe39b630b2fd704cfec77532d90 158 SUPERFAMILY SSF46785 12 149 2.2E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01930 7b168fe39b630b2fd704cfec77532d90 158 Pfam PF12802 MarR family 41 99 3.5E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 SMART SM00873 212 384 1.3E-78 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF50249 38 196 3.43E-45 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF56037 197 394 7.59E-68 T 11-10-2018 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Pfam PF03147 Ferredoxin-fold anticodon binding domain 706 796 8.6E-21 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.50.40.10 201 393 2.3E-69 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 SMART SM00874 400 465 6.1E-19 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.30.930.10 483 688 2.4E-49 T 11-10-2018 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:2.40.50.140 38 155 1.3E-64 T 11-10-2018 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 791 39.553 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF54991 701 796 1.29E-21 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 SMART SM00896 704 796 8.0E-32 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF55681 461 687 1.29E-38 T 11-10-2018 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.30.56.10 400 469 8.0E-15 T 11-10-2018 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Pfam PF03484 tRNA synthetase B5 domain 406 465 1.2E-11 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.30.70.380 706 797 2.0E-20 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Gene3D G3DSA:3.30.56.10 1 181 1.3E-64 T 11-10-2018 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Pfam PF01588 Putative tRNA binding domain 45 146 1.5E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 SUPERFAMILY SSF46955 401 468 2.38E-12 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 796 5.7E-215 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_02699 f3f4f16247ade0580ee78d81c88d6c84 797 Pfam PF03483 B3/4 domain 212 384 5.2E-61 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:1.10.1780.10 4 144 3.3E-39 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:3.40.50.300 165 360 1.3E-61 T 11-10-2018 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 572 590 8.6E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 501 519 8.6E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 619 8.6E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 543 561 8.6E-38 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 221 353 1.5E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 663 743 3.5E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 SMART SM01086 663 752 3.2E-35 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 SUPERFAMILY SSF52540 447 740 1.74E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 SUPERFAMILY SSF81923 4 143 2.88E-55 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 528 546 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 SUPERFAMILY SSF52540 178 426 1.64E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 SMART SM00382 497 633 1.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 SMART SM00382 216 362 2.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 312 324 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 64 4.1E-11 T 11-10-2018 IPR004176 Clp, N-terminal AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 Pfam PF07724 AAA domain (Cdc48 subfamily) 496 657 2.1E-48 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:1.10.8.60 663 768 1.9E-29 T 11-10-2018 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:3.40.50.300 449 661 2.1E-80 T 11-10-2018 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 Gene3D G3DSA:1.10.8.60 361 448 5.6E-31 T 11-10-2018 AMC99_02579 bbf5a55d15ad43058e9a460891203d22 800 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 6 744 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 SUPERFAMILY SSF46689 229 291 4.61E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 SUPERFAMILY SSF46689 14 90 1.13E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 Gene3D G3DSA:1.10.10.60 216 266 3.2E-14 T 11-10-2018 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 231 244 1.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 252 275 1.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 Pfam PF00440 Bacterial regulatory proteins, tetR family 232 277 1.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 7.7E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 Gene3D G3DSA:1.10.357.10 65 201 1.5E-15 T 11-10-2018 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 SUPERFAMILY SSF48498 326 409 1.51E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 Gene3D G3DSA:1.10.357.10 269 411 4.6E-15 T 11-10-2018 AMC99_00480 580488b9d7706b5f8351989484d6ee9c 413 Gene3D G3DSA:1.10.10.60 3 64 1.8E-12 T 11-10-2018 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Gene3D G3DSA:1.10.1240.10 300 388 6.2E-40 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SUPERFAMILY SSF47644 304 390 1.7E-28 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SUPERFAMILY SSF56507 555 868 4.32E-112 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 TIGRFAM TIGR02082 metH: methionine synthase 6 837 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SMART SM01018 308 391 6.7E-45 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Gene3D G3DSA:3.20.20.20 2 297 1.3E-129 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SUPERFAMILY SSF52242 394 544 1.03E-46 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Pfam PF02607 B12 binding domain 310 383 1.4E-25 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Gene3D G3DSA:1.10.288.10 587 737 1.0E-119 T 11-10-2018 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 SUPERFAMILY SSF51717 10 283 8.24E-91 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 588 853 4.9E-112 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Gene3D G3DSA:3.10.196.10 555 866 1.0E-119 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Pfam PF02310 B12 binding domain 400 492 6.8E-20 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 PIRSF PIRSF000381 1 840 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Gene3D G3DSA:3.40.50.280 395 547 2.1E-55 T 11-10-2018 AMC99_00335 e08c1eeea4fcc5b3a5b5b212e5a26ee7 868 Pfam PF00809 Pterin binding enzyme 14 251 8.8E-57 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.30.420.40 201 366 3.4E-93 T 11-10-2018 AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 Pfam PF14450 Cell division protein FtsA 211 387 4.5E-14 T 11-10-2018 AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 Pfam PF02491 SHS2 domain inserted in FTSA 90 165 3.3E-19 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 PIRSF PIRSF003101 5 430 4.7E-123 T 11-10-2018 IPR020823 Cell division protein FtsA AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.30.420.40 18 385 3.4E-93 T 11-10-2018 AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 Hamap MF_02033 Cell division protein FtsA [ftsA]. 10 430 22.376 T 11-10-2018 IPR020823 Cell division protein FtsA AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 SUPERFAMILY SSF53067 14 201 9.84E-46 T 11-10-2018 AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 16 392 2.0E-85 T 11-10-2018 IPR020823 Cell division protein FtsA AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 SMART SM00842 14 200 5.0E-71 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.30.1490.110 89 173 3.4E-93 T 11-10-2018 AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 Gene3D G3DSA:3.90.640.10 239 306 3.4E-93 T 11-10-2018 AMC99_01859 e34cd190df38dfbaf964d20d3e91551d 430 SUPERFAMILY SSF53067 203 392 1.8E-30 T 11-10-2018 AMC99_01528 3cc181ce5a8d1e5f85e784929bff6d5c 61 PIRSF PIRSF002211 1 61 3.6E-20 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01528 3cc181ce5a8d1e5f85e784929bff6d5c 61 SUPERFAMILY SSF55129 5 59 9.03E-16 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMC99_01528 3cc181ce5a8d1e5f85e784929bff6d5c 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 7 61 2.6E-20 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01528 3cc181ce5a8d1e5f85e784929bff6d5c 61 Pfam PF00327 Ribosomal protein L30p/L7e 7 57 5.8E-13 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMC99_01528 3cc181ce5a8d1e5f85e784929bff6d5c 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 61 14.3 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01528 3cc181ce5a8d1e5f85e784929bff6d5c 61 Gene3D G3DSA:3.30.1390.20 4 61 1.3E-19 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMC99_02408 7b874283d728c074c757ac817c011e1d 671 SMART SM00863 176 228 1.0E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 SUPERFAMILY SSF55186 67 250 1.31E-49 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.30.980.10 73 230 3.0E-53 T 11-10-2018 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 176 228 1.9E-12 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 SUPERFAMILY SSF52954 561 662 9.67E-31 T 11-10-2018 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 SUPERFAMILY SSF55681 252 557 4.79E-91 T 11-10-2018 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.30.930.10 232 562 5.6E-118 T 11-10-2018 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.40.50.800 563 665 6.4E-29 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AMC99_02408 7b874283d728c074c757ac817c011e1d 671 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 660 3.1E-192 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 SUPERFAMILY SSF81271 6 64 1.11E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 353 559 8.6E-41 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 495 523 6.3E-49 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 389 412 6.3E-49 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 565 577 6.3E-49 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 356 384 6.3E-49 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 PRINTS PR01047 Threonyl-tRNA synthetase signature 538 551 6.3E-49 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Pfam PF03129 Anticodon binding domain 572 660 2.8E-22 T 11-10-2018 IPR004154 Anticodon-binding AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.30.54.20 137 194 3.0E-53 T 11-10-2018 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Pfam PF02824 TGS domain 6 64 9.8E-13 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 665 31.465 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMC99_02408 7b874283d728c074c757ac817c011e1d 671 Gene3D G3DSA:3.10.20.30 4 67 1.9E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_01091 189363fe141afefdd2f650e538524ca1 140 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 3 132 5.4E-32 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_01091 189363fe141afefdd2f650e538524ca1 140 Gene3D G3DSA:3.40.50.960 1 139 2.9E-45 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_01091 189363fe141afefdd2f650e538524ca1 140 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 1 138 21.525 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_01091 189363fe141afefdd2f650e538524ca1 140 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 2 134 1.8E-41 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_01091 189363fe141afefdd2f650e538524ca1 140 SUPERFAMILY SSF52121 3 138 3.66E-44 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 Gene3D G3DSA:3.40.50.261 250 397 2.3E-57 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 SUPERFAMILY SSF56059 1 248 4.65E-78 T 11-10-2018 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 267 291 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 395 9.0E-155 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 Pfam PF08442 ATP-grasp domain 2 213 1.3E-73 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 Gene3D G3DSA:3.30.470.20 1 241 6.9E-92 T 11-10-2018 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 Gene3D G3DSA:3.30.1490.20 21 119 6.9E-92 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 PIRSF PIRSF001554 1 398 2.4E-148 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 Pfam PF00549 CoA-ligase 272 391 6.2E-27 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 43.038 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMC99_02639 89523e5c870ef3a698ed326f4404883b 399 SUPERFAMILY SSF52210 249 394 3.27E-54 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMC99_01059 35fdc86940565d76ed33ae21187f067f 231 SUPERFAMILY SSF50891 59 213 1.33E-41 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMC99_01059 35fdc86940565d76ed33ae21187f067f 231 Gene3D G3DSA:2.40.100.10 4 205 5.8E-40 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMC99_01059 35fdc86940565d76ed33ae21187f067f 231 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 165 180 2.1E-7 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01059 35fdc86940565d76ed33ae21187f067f 231 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 2.1E-7 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01059 35fdc86940565d76ed33ae21187f067f 231 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 71 86 2.1E-7 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01059 35fdc86940565d76ed33ae21187f067f 231 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 109 2.1E-7 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01059 35fdc86940565d76ed33ae21187f067f 231 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 64 198 1.1E-36 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 Gene3D G3DSA:1.25.50.10 561 883 3.1E-102 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AMC99_02662 1124530bc09f03003a02b011444a40e1 884 Gene3D G3DSA:1.10.390.10 303 466 3.4E-62 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AMC99_02662 1124530bc09f03003a02b011444a40e1 884 Gene3D G3DSA:2.60.40.1730 36 217 1.4E-63 T 11-10-2018 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 Gene3D G3DSA:2.60.40.1840 467 559 4.7E-23 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AMC99_02662 1124530bc09f03003a02b011444a40e1 884 SUPERFAMILY SSF63737 25 216 2.22E-42 T 11-10-2018 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 467 558 1.2E-25 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AMC99_02662 1124530bc09f03003a02b011444a40e1 884 SUPERFAMILY SSF55486 227 473 1.9E-74 T 11-10-2018 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 Gene3D G3DSA:1.10.1740.60 219 302 9.9E-40 T 11-10-2018 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 Pfam PF01433 Peptidase family M1 domain 231 459 4.4E-55 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 281 291 1.5E-7 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 336 348 1.5E-7 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 317 332 1.5E-7 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 199 214 1.5E-7 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_02662 1124530bc09f03003a02b011444a40e1 884 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 563 882 6.8E-105 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AMC99_02662 1124530bc09f03003a02b011444a40e1 884 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 33 881 0.0 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 AMC99_01294 5f8d2f6c7dd51b24395a2727b1b56144 299 SUPERFAMILY SSF88713 11 266 1.2E-51 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_01294 5f8d2f6c7dd51b24395a2727b1b56144 299 Gene3D G3DSA:3.20.20.370 2 279 1.5E-51 T 11-10-2018 AMC99_01294 5f8d2f6c7dd51b24395a2727b1b56144 299 Pfam PF01522 Polysaccharide deacetylase 50 157 6.9E-22 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_01294 5f8d2f6c7dd51b24395a2727b1b56144 299 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 17 286 5.3E-129 T 11-10-2018 IPR014344 PEP-CTERM locus, polysaccharide deactylase AMC99_01294 5f8d2f6c7dd51b24395a2727b1b56144 299 Pfam PF11959 Domain of unknown function (DUF3473) 159 286 3.9E-49 T 11-10-2018 IPR022560 Domain of unknown function DUF3473 AMC99_00920 13d3b82dfcf43205824423142840849b 149 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 124 4.0E-18 T 11-10-2018 AMC99_00920 13d3b82dfcf43205824423142840849b 149 SUPERFAMILY SSF54593 1 142 3.36E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00920 13d3b82dfcf43205824423142840849b 149 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 5 139 8.3E-37 T 11-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 AMC99_00920 13d3b82dfcf43205824423142840849b 149 Gene3D G3DSA:3.10.180.10 1 140 4.8E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 Gene3D G3DSA:3.30.70.80 30 105 1.5E-13 T 11-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 340 350 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 Pfam PF00082 Subtilase family 150 352 2.8E-30 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 SUPERFAMILY SSF52743 142 352 4.19E-59 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 339 355 2.4E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 193 2.4E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 143 162 2.4E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 184 194 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 SUPERFAMILY SSF54897 30 104 3.17E-8 T 11-10-2018 AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 Gene3D G3DSA:3.40.50.200 124 361 1.1E-66 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMC99_01685 4badbd23848742f63f1f50e96bd97484 381 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 148 159 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMC99_02508 090a8a76e45372b5a0b57242d881bca2 331 Pfam PF02597 ThiS family 11 73 6.0E-12 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMC99_02508 090a8a76e45372b5a0b57242d881bca2 331 Pfam PF05690 Thiazole biosynthesis protein ThiG 82 326 3.9E-108 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AMC99_02508 090a8a76e45372b5a0b57242d881bca2 331 SUPERFAMILY SSF110399 78 318 1.14E-84 T 11-10-2018 AMC99_02508 090a8a76e45372b5a0b57242d881bca2 331 Gene3D G3DSA:3.20.20.70 73 331 1.4E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02508 090a8a76e45372b5a0b57242d881bca2 331 Hamap MF_00443 Thiazole synthase [thiG]. 79 331 41.324 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AMC99_02508 090a8a76e45372b5a0b57242d881bca2 331 SUPERFAMILY SSF54285 10 72 2.78E-16 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMC99_02508 090a8a76e45372b5a0b57242d881bca2 331 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 11 73 5.1E-19 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis AMC99_02508 090a8a76e45372b5a0b57242d881bca2 331 Gene3D G3DSA:3.10.20.30 11 72 1.0E-19 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_01221 2ce69253097d71f0f20c82c864eade9c 124 Pfam PF03840 Preprotein translocase SecG subunit 6 71 4.5E-20 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_01221 2ce69253097d71f0f20c82c864eade9c 124 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 5.1E-10 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_01221 2ce69253097d71f0f20c82c864eade9c 124 PRINTS PR01651 Protein-export SecG membrane protein signature 2 22 5.1E-10 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_01221 2ce69253097d71f0f20c82c864eade9c 124 PRINTS PR01651 Protein-export SecG membrane protein signature 37 53 5.1E-10 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_01221 2ce69253097d71f0f20c82c864eade9c 124 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 5 72 1.7E-20 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMC99_00535 e18f40fb6382c8c24f93d766576e77bf 153 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 13 150 9.4E-39 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AMC99_00535 e18f40fb6382c8c24f93d766576e77bf 153 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 11 152 21.982 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AMC99_00535 e18f40fb6382c8c24f93d766576e77bf 153 Pfam PF01029 NusB family 15 149 1.3E-34 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMC99_00535 e18f40fb6382c8c24f93d766576e77bf 153 SUPERFAMILY SSF48013 11 152 1.18E-35 T 11-10-2018 IPR035926 NusB-like superfamily AMC99_00535 e18f40fb6382c8c24f93d766576e77bf 153 Gene3D G3DSA:1.10.940.10 10 153 1.2E-40 T 11-10-2018 IPR035926 NusB-like superfamily AMC99_02454 8394d9127fa503f99d30272481399652 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 36 7.2E-10 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMC99_02454 8394d9127fa503f99d30272481399652 335 Gene3D G3DSA:3.40.50.2300 160 287 5.2E-58 T 11-10-2018 AMC99_02454 8394d9127fa503f99d30272481399652 335 SUPERFAMILY SSF47413 1 47 1.31E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_02454 8394d9127fa503f99d30272481399652 335 Gene3D G3DSA:3.40.50.2300 74 304 5.2E-58 T 11-10-2018 AMC99_02454 8394d9127fa503f99d30272481399652 335 SMART SM00354 1 59 2.4E-8 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMC99_02454 8394d9127fa503f99d30272481399652 335 SUPERFAMILY SSF53822 82 330 4.71E-54 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMC99_02454 8394d9127fa503f99d30272481399652 335 Gene3D G3DSA:1.10.260.40 1 48 1.3E-14 T 11-10-2018 AMC99_02454 8394d9127fa503f99d30272481399652 335 Pfam PF13377 Periplasmic binding protein-like domain 167 326 6.3E-33 T 11-10-2018 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 248 1.2E-62 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 Gene3D G3DSA:3.30.420.40 250 489 6.6E-75 T 11-10-2018 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 445 2.8E-47 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 SUPERFAMILY SSF53067 251 487 2.82E-70 T 11-10-2018 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 358 378 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 Gene3D G3DSA:3.30.420.40 2 249 5.3E-92 T 11-10-2018 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 487 6.9E-182 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 PIRSF PIRSF000538 2 489 3.9E-149 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 AMC99_02047 21121d53c06b82ec32c3d0ccf8adc7b3 489 SUPERFAMILY SSF53067 4 251 6.78E-80 T 11-10-2018 AMC99_00788 86b2bb03addb079cc6854a1d02ecbb81 75 Pfam PF01206 Sulfurtransferase TusA 5 73 1.0E-24 T 11-10-2018 IPR001455 TusA-like domain AMC99_00788 86b2bb03addb079cc6854a1d02ecbb81 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 11-10-2018 IPR001455 TusA-like domain AMC99_00788 86b2bb03addb079cc6854a1d02ecbb81 75 SUPERFAMILY SSF64307 3 73 9.81E-24 T 11-10-2018 IPR036868 TusA-like domain superfamily AMC99_00788 86b2bb03addb079cc6854a1d02ecbb81 75 Gene3D G3DSA:3.30.110.40 1 75 8.6E-30 T 11-10-2018 IPR036868 TusA-like domain superfamily AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 Pfam PF14815 NUDIX domain 237 337 4.7E-18 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 Gene3D G3DSA:3.90.79.10 227 344 1.2E-8 T 11-10-2018 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 SUPERFAMILY SSF55811 222 339 4.36E-19 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 SMART SM00478 45 192 1.2E-38 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 Gene3D G3DSA:1.10.340.30 22 136 5.5E-80 T 11-10-2018 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 Pfam PF00633 Helix-hairpin-helix motif 106 132 7.4E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 SUPERFAMILY SSF48150 7 224 1.73E-66 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 ProSitePatterns PS01155 Endonuclease III family signature. 106 133 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 SMART SM00525 193 213 0.0045 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 Gene3D G3DSA:1.10.1670.10 11 214 5.5E-80 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMC99_01626 29aa8bcb0ce8b73138164b65eb656fbc 345 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 173 5.0E-18 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_01660 94735b6c78810e3ff78e6c04a051e13f 168 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 168 16.178 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01660 94735b6c78810e3ff78e6c04a051e13f 168 Gene3D G3DSA:1.10.520.20 1 89 3.9E-17 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01660 94735b6c78810e3ff78e6c04a051e13f 168 Pfam PF00213 ATP synthase delta (OSCP) subunit 2 166 2.9E-48 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01660 94735b6c78810e3ff78e6c04a051e13f 168 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 2 165 4.8E-37 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01660 94735b6c78810e3ff78e6c04a051e13f 168 PRINTS PR00125 ATP synthase delta subunit signature 126 141 4.8E-20 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01660 94735b6c78810e3ff78e6c04a051e13f 168 PRINTS PR00125 ATP synthase delta subunit signature 76 90 4.8E-20 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01660 94735b6c78810e3ff78e6c04a051e13f 168 PRINTS PR00125 ATP synthase delta subunit signature 65 76 4.8E-20 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01660 94735b6c78810e3ff78e6c04a051e13f 168 PRINTS PR00125 ATP synthase delta subunit signature 141 159 4.8E-20 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01660 94735b6c78810e3ff78e6c04a051e13f 168 SUPERFAMILY SSF47928 2 96 1.29E-19 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_02528 2dfbd87c88467e9fb5d416318fa37e93 143 SUPERFAMILY SSF54631 12 141 3.92E-34 T 11-10-2018 AMC99_02528 2dfbd87c88467e9fb5d416318fa37e93 143 Gene3D G3DSA:3.10.580.10 2 142 4.7E-43 T 11-10-2018 AMC99_02528 2dfbd87c88467e9fb5d416318fa37e93 143 SMART SM00116 14 61 1.1E-10 T 11-10-2018 IPR000644 CBS domain AMC99_02528 2dfbd87c88467e9fb5d416318fa37e93 143 SMART SM00116 79 126 6.7E-8 T 11-10-2018 IPR000644 CBS domain AMC99_02528 2dfbd87c88467e9fb5d416318fa37e93 143 Pfam PF00571 CBS domain 13 61 3.6E-12 T 11-10-2018 IPR000644 CBS domain AMC99_02528 2dfbd87c88467e9fb5d416318fa37e93 143 Pfam PF00571 CBS domain 72 124 2.7E-10 T 11-10-2018 IPR000644 CBS domain AMC99_01071 f812adefb8f5b8aaf1800aba028d26a5 113 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 108 48.583 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMC99_01071 f812adefb8f5b8aaf1800aba028d26a5 113 Pfam PF03477 ATP cone domain 5 90 1.3E-15 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 1.1E-76 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 416 2.2E-27 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 SUPERFAMILY SSF51246 325 418 6.8E-29 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 SUPERFAMILY SSF52440 1 101 3.45E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 SMART SM01210 326 418 4.3E-48 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 Gene3D G3DSA:3.30.470.20 188 324 3.9E-58 T 11-10-2018 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 8.4E-163 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 Gene3D G3DSA:3.40.50.20 1 93 2.8E-37 T 11-10-2018 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 SMART SM01209 101 292 8.2E-132 T 11-10-2018 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 Gene3D G3DSA:3.30.1490.20 120 187 2.2E-21 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.9E-36 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 Gene3D G3DSA:3.90.600.10 326 426 4.3E-31 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 41.758 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_02482 ab71fdf488dd7293e18c3abda3472611 427 SUPERFAMILY SSF56059 102 316 9.72E-61 T 11-10-2018 AMC99_02712 31672c144b00c26f465cb4f6bf7f5d23 312 Pfam PF04116 Fatty acid hydroxylase superfamily 81 216 9.7E-30 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF13188 PAS domain 181 228 0.12 T 11-10-2018 IPR000014 PAS domain AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF00512 His Kinase A (phospho-acceptor) domain 560 627 6.4E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF55874 617 779 3.01E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00387 672 779 9.8E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00388 559 627 3.7E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 Gene3D G3DSA:3.30.565.10 646 779 1.9E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 673 779 1.7E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF55785 181 282 6.46E-6 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF47384 545 627 8.04E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF55785 281 350 1.52E-5 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF12860 PAS fold 431 543 8.8E-10 T 11-10-2018 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 Pfam PF12860 PAS fold 303 414 5.7E-13 T 11-10-2018 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SUPERFAMILY SSF55785 436 548 8.23E-6 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 Gene3D G3DSA:1.10.287.130 550 629 3.2E-19 T 11-10-2018 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 Gene3D G3DSA:3.30.450.20 285 422 1.7E-5 T 11-10-2018 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00091 425 492 24.0 T 11-10-2018 IPR000014 PAS domain AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00091 177 244 2.0 T 11-10-2018 IPR000014 PAS domain AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 SMART SM00091 297 363 1.5 T 11-10-2018 IPR000014 PAS domain AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 742 760 1.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 766 779 1.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 723 1.3E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00947 636aba4e7de910dc39b0c2e20e4bf308 779 Gene3D G3DSA:3.30.450.20 432 549 4.0E-7 T 11-10-2018 AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 SUPERFAMILY SSF51735 1 245 6.77E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 4.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 5.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 5.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 5.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 198 4.1E-6 T 11-10-2018 AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 Gene3D G3DSA:3.40.50.720 8 300 6.1E-72 T 11-10-2018 AMC99_01674 3fd6432d7d6da1cf3b49783083b17665 309 Pfam PF00106 short chain dehydrogenase 8 205 4.9E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:1.20.1580.10 719 857 5.2E-140 T 11-10-2018 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 SUPERFAMILY SSF52540 6 598 1.87E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 967 22.507 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:1.10.8.280 308 426 3.1E-241 T 11-10-2018 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:1.20.1580.10 92 521 3.1E-241 T 11-10-2018 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:3.30.190.20 132 250 3.1E-241 T 11-10-2018 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 ProSitePatterns PS00211 ABC transporters family signature. 516 530 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 Pfam PF00005 ABC transporter 833 887 1.6E-5 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 ProSitePatterns PS00211 ABC transporters family signature. 857 871 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 SUPERFAMILY SSF52540 642 940 7.1E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:3.40.50.300 644 963 5.2E-140 T 11-10-2018 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 952 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AMC99_01494 e618ba044cda1f27c36ab76e582482ac 975 Gene3D G3DSA:3.40.50.300 8 624 3.1E-241 T 11-10-2018 AMC99_00796 4c5d9c873ae7a0e5652fca9b6762e2ff 481 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 438 1.7E-163 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMC99_00796 4c5d9c873ae7a0e5652fca9b6762e2ff 481 PIRSF PIRSF006446 2 460 1.8E-201 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 AMC99_02323 ca1044a62ff3b266de0cd186c0f3bbf1 547 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 258 483 2.1E-54 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 AMC99_02323 ca1044a62ff3b266de0cd186c0f3bbf1 547 Gene3D G3DSA:3.40.50.12710 202 542 6.1E-97 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 AMC99_02323 ca1044a62ff3b266de0cd186c0f3bbf1 547 SUPERFAMILY SSF53335 208 547 8.64E-95 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 187 0.0016 T 11-10-2018 AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 4 241 4.1E-55 T 11-10-2018 AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 SUPERFAMILY SSF51735 1 243 2.58E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02089 d097b3d53ca929b9e71fa55894c5be64 244 Gene3D G3DSA:3.40.50.720 1 244 9.8E-74 T 11-10-2018 AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 SUPERFAMILY SSF52540 202 378 5.38E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 19 371 6.2E-134 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 9.1E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 225 243 9.1E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 9.1E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 Pfam PF13167 GTP-binding GTPase N-terminal 28 114 1.1E-24 T 11-10-2018 IPR025121 GTPase HflX, N-terminal AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 Pfam PF01926 50S ribosome-binding GTPase 204 329 1.2E-17 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 Pfam PF16360 GTP-binding GTPase Middle Region 117 196 1.7E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 Hamap MF_00900 GTPase HflX [hflX]. 30 402 45.924 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 PIRSF PIRSF006809 6 430 4.8E-138 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 Gene3D G3DSA:3.40.50.300 202 380 1.8E-38 T 11-10-2018 AMC99_01186 4ad4465dadad56b2ce5d6a52f50bf90b 432 Gene3D G3DSA:3.40.50.11060 20 141 9.6E-34 T 11-10-2018 AMC99_00425 39190c88494a6160089e56db0312b9b1 379 SUPERFAMILY SSF47203 230 375 8.54E-38 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00425 39190c88494a6160089e56db0312b9b1 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 120 5.9E-21 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00425 39190c88494a6160089e56db0312b9b1 379 Gene3D G3DSA:1.10.540.10 4 122 2.6E-26 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00425 39190c88494a6160089e56db0312b9b1 379 Gene3D G3DSA:1.20.140.10 235 378 2.0E-35 T 11-10-2018 AMC99_00425 39190c88494a6160089e56db0312b9b1 379 Gene3D G3DSA:2.40.110.10 128 234 7.3E-16 T 11-10-2018 AMC99_00425 39190c88494a6160089e56db0312b9b1 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 205 5.9E-10 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00425 39190c88494a6160089e56db0312b9b1 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 1.1E-26 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00425 39190c88494a6160089e56db0312b9b1 379 SUPERFAMILY SSF56645 1 226 6.94E-44 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_02539 7b2f809c18bae87c810cc5ac81557c17 285 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 91 8.9E-29 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMC99_02539 7b2f809c18bae87c810cc5ac81557c17 285 SUPERFAMILY SSF53223 5 104 7.48E-31 T 11-10-2018 AMC99_02539 7b2f809c18bae87c810cc5ac81557c17 285 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 285 29.799 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMC99_02539 7b2f809c18bae87c810cc5ac81557c17 285 Gene3D G3DSA:3.40.50.10860 8 273 3.2E-75 T 11-10-2018 AMC99_02539 7b2f809c18bae87c810cc5ac81557c17 285 SUPERFAMILY SSF51735 105 279 1.4E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02539 7b2f809c18bae87c810cc5ac81557c17 285 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 272 2.1E-61 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 AMC99_02539 7b2f809c18bae87c810cc5ac81557c17 285 Gene3D G3DSA:3.40.50.720 104 250 3.2E-75 T 11-10-2018 AMC99_00497 6f0c1d2e9f724f346602f554dd0c1eb3 541 Pfam PF04616 Glycosyl hydrolases family 43 62 332 2.6E-78 T 11-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 AMC99_00497 6f0c1d2e9f724f346602f554dd0c1eb3 541 Gene3D G3DSA:2.60.120.200 358 538 2.5E-15 T 11-10-2018 AMC99_00497 6f0c1d2e9f724f346602f554dd0c1eb3 541 SUPERFAMILY SSF49899 357 536 2.18E-21 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMC99_00497 6f0c1d2e9f724f346602f554dd0c1eb3 541 SUPERFAMILY SSF75005 61 338 1.23E-69 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMC99_00497 6f0c1d2e9f724f346602f554dd0c1eb3 541 Gene3D G3DSA:2.115.10.20 59 343 1.9E-67 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily AMC99_00129 7389f6d41744f6fa13009992bcca7a69 1245 Pfam PF00384 Molybdopterin oxidoreductase 108 833 1.7E-152 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00129 7389f6d41744f6fa13009992bcca7a69 1245 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 AMC99_00129 7389f6d41744f6fa13009992bcca7a69 1245 SUPERFAMILY SSF50692 1082 1236 1.15E-44 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMC99_00129 7389f6d41744f6fa13009992bcca7a69 1245 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1201 3.3E-22 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMC99_00129 7389f6d41744f6fa13009992bcca7a69 1245 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 11-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AMC99_00129 7389f6d41744f6fa13009992bcca7a69 1245 SMART SM00926 43 105 3.7E-8 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00129 7389f6d41744f6fa13009992bcca7a69 1245 SUPERFAMILY SSF53706 13 1070 0.0 T 11-10-2018 AMC99_00129 7389f6d41744f6fa13009992bcca7a69 1245 Gene3D G3DSA:3.40.50.12440 44 1243 0.0 T 11-10-2018 AMC99_00129 7389f6d41744f6fa13009992bcca7a69 1245 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 2.7E-17 T 11-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AMC99_02090 98902b7bb3ea37be53c29a38164db889 388 SUPERFAMILY SSF56349 95 373 1.24E-59 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_02090 98902b7bb3ea37be53c29a38164db889 388 Gene3D G3DSA:1.10.150.130 92 200 4.1E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMC99_02090 98902b7bb3ea37be53c29a38164db889 388 Pfam PF00589 Phage integrase family 229 364 4.1E-21 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_02090 98902b7bb3ea37be53c29a38164db889 388 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 96 153 4.6E-7 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMC99_02090 98902b7bb3ea37be53c29a38164db889 388 Gene3D G3DSA:1.10.443.10 201 379 1.2E-32 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMC99_02090 98902b7bb3ea37be53c29a38164db889 388 Pfam PF13356 Arm DNA-binding domain 4 90 1.1E-16 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMC99_02090 98902b7bb3ea37be53c29a38164db889 388 Gene3D G3DSA:3.30.160.390 2 91 5.3E-13 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMC99_00617 cc7fc9177987a7e9fe26ec5796d5587e 113 SUPERFAMILY SSF46785 27 74 6.54E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00449 06c19facd4e54880c62ff93f976cffff 172 SUPERFAMILY SSF55200 88 172 4.71E-36 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AMC99_00449 06c19facd4e54880c62ff93f976cffff 172 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 88 172 2.4E-40 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AMC99_00449 06c19facd4e54880c62ff93f976cffff 172 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 172 2.9E-61 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMC99_00449 06c19facd4e54880c62ff93f976cffff 172 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 13 78 6.0E-25 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMC99_00449 06c19facd4e54880c62ff93f976cffff 172 Gene3D G3DSA:3.30.110.10 80 172 9.9E-40 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AMC99_00449 06c19facd4e54880c62ff93f976cffff 172 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 4 172 26.865 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMC99_00449 06c19facd4e54880c62ff93f976cffff 172 SUPERFAMILY SSF54364 8 82 1.19E-24 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMC99_00449 06c19facd4e54880c62ff93f976cffff 172 Gene3D G3DSA:3.10.20.80 7 79 6.5E-26 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AMC99_00520 3054ce0861b16257a182cb345e88d0f7 73 Gene3D G3DSA:2.40.50.140 1 62 9.4E-31 T 11-10-2018 AMC99_00520 3054ce0861b16257a182cb345e88d0f7 73 SUPERFAMILY SSF50249 1 66 2.94E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00520 3054ce0861b16257a182cb345e88d0f7 73 Pfam PF01176 Translation initiation factor 1A / IF-1 2 62 1.4E-26 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AMC99_00520 3054ce0861b16257a182cb345e88d0f7 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 1 62 2.0E-29 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMC99_00520 3054ce0861b16257a182cb345e88d0f7 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 67 21.109 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMC99_00510 93c0b9620b67517f57139338d5c26b97 592 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 495 515 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AMC99_00510 93c0b9620b67517f57139338d5c26b97 592 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 583 7.2E-260 T 11-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily AMC99_00510 93c0b9620b67517f57139338d5c26b97 592 Gene3D G3DSA:1.20.1730.10 21 332 3.6E-37 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AMC99_00510 93c0b9620b67517f57139338d5c26b97 592 Gene3D G3DSA:1.20.1730.10 366 578 1.7E-24 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AMC99_00510 93c0b9620b67517f57139338d5c26b97 592 Pfam PF00474 Sodium:solute symporter family 398 513 4.5E-15 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMC99_00510 93c0b9620b67517f57139338d5c26b97 592 Pfam PF00474 Sodium:solute symporter family 33 302 1.7E-35 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 PIRSF PIRSF000726 13 74 4.3E-19 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 PIRSF PIRSF000726 68 438 1.3E-121 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 SUPERFAMILY SSF53633 15 263 1.28E-68 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 SUPERFAMILY SSF55021 355 432 2.89E-23 T 11-10-2018 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 Gene3D G3DSA:3.30.2130.10 273 438 1.2E-60 T 11-10-2018 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 ProSitePatterns PS00324 Aspartokinase signature. 17 25 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 Pfam PF00696 Amino acid kinase family 15 241 1.7E-47 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 Gene3D G3DSA:3.40.1160.10 13 272 4.0E-79 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 74 429 9.6E-111 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 Pfam PF13840 ACT domain 365 426 1.4E-14 T 11-10-2018 IPR027795 CASTOR, ACT domain AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 Pfam PF01842 ACT domain 292 352 7.1E-11 T 11-10-2018 IPR002912 ACT domain AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 SUPERFAMILY SSF55021 275 354 1.76E-18 T 11-10-2018 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 1.5E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 PRINTS PR00474 Glutamate 5-kinase family signature 164 191 1.5E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_00010 e74fb1a87dd687c998d155822c7ab9d6 438 PRINTS PR00474 Glutamate 5-kinase family signature 45 59 1.5E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_01258 321ad82d0cdcf3e36d0bf53893b481f4 403 Gene3D G3DSA:1.10.645.20 16 403 6.7E-171 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01258 321ad82d0cdcf3e36d0bf53893b481f4 403 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 55 66 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01258 321ad82d0cdcf3e36d0bf53893b481f4 403 SUPERFAMILY SSF56762 28 403 4.45E-134 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01258 321ad82d0cdcf3e36d0bf53893b481f4 403 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 18 403 3.6E-172 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01258 321ad82d0cdcf3e36d0bf53893b481f4 403 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 5 403 48.401 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01258 321ad82d0cdcf3e36d0bf53893b481f4 403 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 132 403 4.0E-116 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 SUPERFAMILY SSF54909 61 148 5.09E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 SMART SM00344 1 110 1.0E-49 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 SUPERFAMILY SSF46785 1 87 1.46E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 Gene3D G3DSA:1.10.10.10 2 53 4.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-17 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 1.7E-21 T 11-10-2018 AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 Gene3D G3DSA:3.30.70.920 54 138 2.0E-26 T 11-10-2018 AMC99_00611 6997f6ebe64ec0f95f0de34f2fcc0a25 149 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 2.0E-21 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 4 476 59.052 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 SUPERFAMILY SSF53732 4 475 8.76E-165 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 ProSitePatterns PS00450 Aconitase family signature 1. 348 364 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 Gene3D G3DSA:3.30.499.20 7 295 1.1E-96 T 11-10-2018 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 ProSitePatterns PS01244 Aconitase family signature 2. 409 422 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 Pfam PF00330 Aconitase family (aconitate hydratase) 10 467 3.9E-160 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 117 125 2.4E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 295 309 2.4E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 91 104 2.4E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 218 231 2.4E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 142 157 2.4E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 409 422 2.4E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 352 363 2.4E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 128 141 2.4E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 PRINTS PR00415 Aconitase family signature 204 217 2.4E-48 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 5 475 1.5E-234 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 AMC99_01704 6497279d5d124e3b45ce87f0f622176e 477 Gene3D G3DSA:3.30.499.10 302 477 1.1E-50 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMC99_00806 8831a266cab8dfca7f6fe69e66c130bd 218 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 7.9E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_00806 8831a266cab8dfca7f6fe69e66c130bd 218 Gene3D G3DSA:3.40.30.10 1 83 2.3E-21 T 11-10-2018 AMC99_00806 8831a266cab8dfca7f6fe69e66c130bd 218 Gene3D G3DSA:1.20.1050.10 84 212 3.6E-33 T 11-10-2018 AMC99_00806 8831a266cab8dfca7f6fe69e66c130bd 218 SUPERFAMILY SSF47616 80 210 4.93E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_00806 8831a266cab8dfca7f6fe69e66c130bd 218 SUPERFAMILY SSF52833 1 84 2.07E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00806 8831a266cab8dfca7f6fe69e66c130bd 218 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 209 1.9E-63 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 37 501 4.1E-153 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 91 114 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 28 53 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 119 143 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 5.5E-147 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 Gene3D G3DSA:1.20.210.10 24 564 2.8E-241 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 555 1.2E-212 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMC99_00565 c4bbc449016c0ee0e67e8862a9928b8e 569 SUPERFAMILY SSF81442 25 557 1.15E-212 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_02299 d19bbfbfa17e3d734575981a2f9d9e76 324 SUPERFAMILY SSF51412 1 318 4.19E-67 T 11-10-2018 AMC99_02299 d19bbfbfa17e3d734575981a2f9d9e76 324 Gene3D G3DSA:3.20.20.70 1 323 1.3E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02299 d19bbfbfa17e3d734575981a2f9d9e76 324 Pfam PF03060 Nitronate monooxygenase 3 308 1.2E-57 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMC99_00548 077318c38568e5179a2a3ceee2383143 195 SUPERFAMILY SSF55718 93 192 3.24E-7 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMC99_00548 077318c38568e5179a2a3ceee2383143 195 SUPERFAMILY SSF46785 1 77 1.58E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00548 077318c38568e5179a2a3ceee2383143 195 Gene3D G3DSA:1.10.10.10 1 79 3.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00548 077318c38568e5179a2a3ceee2383143 195 Gene3D G3DSA:3.30.1050.10 80 194 1.5E-7 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily AMC99_00548 077318c38568e5179a2a3ceee2383143 195 Pfam PF01638 HxlR-like helix-turn-helix 1 78 5.4E-18 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AMC99_00655 a7a98fb642b4ed2e8d64f4b4b9f9c946 392 SUPERFAMILY SSF53756 23 391 3.31E-68 T 11-10-2018 AMC99_00655 a7a98fb642b4ed2e8d64f4b4b9f9c946 392 Gene3D G3DSA:3.40.50.2000 209 367 4.4E-39 T 11-10-2018 AMC99_00655 a7a98fb642b4ed2e8d64f4b4b9f9c946 392 Gene3D G3DSA:3.40.50.2000 21 206 5.4E-20 T 11-10-2018 AMC99_00655 a7a98fb642b4ed2e8d64f4b4b9f9c946 392 Pfam PF13439 Glycosyltransferase Family 4 24 197 2.2E-13 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMC99_00655 a7a98fb642b4ed2e8d64f4b4b9f9c946 392 Pfam PF00534 Glycosyl transferases group 1 220 366 2.3E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:1.20.1640.10 561 1072 9.0E-233 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.70.1430 616 717 9.0E-233 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.70.1430 65 158 3.3E-34 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82714 238 320 6.93E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82693 65 151 7.59E-22 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.2090.10 772 860 9.0E-233 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.70.1320 206 379 9.0E-233 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.70.1440 718 919 9.0E-233 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 412 433 8.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 669 683 8.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 599 616 8.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 526 549 8.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 63 81 8.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 385 408 8.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 PRINTS PR00702 Acriflavin resistance protein family signature 35 59 8.7E-23 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:3.30.2090.10 235 326 9.0E-233 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:1.20.1640.10 380 560 9.0E-233 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82693 625 708 1.36E-8 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82866 855 1078 5.89E-50 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82714 771 855 3.14E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 SUPERFAMILY SSF82866 345 553 7.19E-32 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Gene3D G3DSA:1.20.1640.10 38 64 3.3E-34 T 11-10-2018 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 25 1080 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 AMC99_00085 8a1e7fa622c17e457348ae51a4fb0fff 1111 Pfam PF00873 AcrB/AcrD/AcrF family 29 1074 5.0E-284 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00271 2ef962f4e464a74bded1d190d8ac3977 236 SMART SM00702 47 226 5.7E-29 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMC99_00271 2ef962f4e464a74bded1d190d8ac3977 236 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 122 226 1.4E-15 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMC99_00271 2ef962f4e464a74bded1d190d8ac3977 236 Gene3D G3DSA:2.60.120.620 34 227 1.1E-45 T 11-10-2018 AMC99_00459 baf2ec8be7ddbac29ed4e6055c91f2bc 321 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 241 1.1E-15 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_00459 baf2ec8be7ddbac29ed4e6055c91f2bc 321 SUPERFAMILY SSF50891 80 283 3.65E-19 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 SMART SM00382 50 326 8.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 325 395 1.4E-6 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 SMART SM01086 325 421 1.2E-19 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 Gene3D G3DSA:3.40.50.300 7 322 1.7E-98 T 11-10-2018 AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 433 8.6E-173 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 SUPERFAMILY SSF52540 3 425 3.41E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 Pfam PF07724 AAA domain (Cdc48 subfamily) 195 319 1.1E-33 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 Pfam PF13401 AAA domain 52 143 1.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 Gene3D G3DSA:1.10.8.10 111 234 1.7E-98 T 11-10-2018 AMC99_02128 55537dd3c0f26eb12083174e4d60cee1 433 Gene3D G3DSA:1.10.8.60 325 430 5.0E-38 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82866 308 510 4.71E-37 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.2090.10 188 279 7.5E-222 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.70.1440 688 910 7.5E-222 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.70.1430 579 687 7.5E-222 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82714 192 272 7.98E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.70.1320 139 343 7.5E-222 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:1.20.1640.10 21 522 7.5E-222 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82866 827 1064 4.58E-41 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.2090.10 738 832 7.5E-222 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:1.20.1640.10 523 1060 7.5E-222 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82714 737 828 2.35E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 7.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 403 427 7.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 458 481 7.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 7.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 483 506 7.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 PRINTS PR00702 Acriflavin resistance protein family signature 375 396 7.2E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Pfam PF00873 AcrB/AcrD/AcrF family 14 1062 4.9E-149 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82693 575 688 1.88E-12 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82693 45 139 9.94E-17 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 SUPERFAMILY SSF82693 156 340 1.92E-9 T 11-10-2018 AMC99_00762 ce9d8c10d0df0ba1c2e83c89d7745126 1081 Gene3D G3DSA:3.30.70.1430 45 840 7.5E-222 T 11-10-2018 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 308 315 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 Gene3D G3DSA:3.40.630.10 134 459 2.4E-117 T 11-10-2018 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 SUPERFAMILY SSF53187 143 458 6.91E-99 T 11-10-2018 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 148 449 2.8E-98 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 Gene3D G3DSA:3.40.220.10 7 128 9.1E-19 T 11-10-2018 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 223 240 5.0E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 245 266 5.0E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 304 324 5.0E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 332 347 5.0E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_01888 cf4992ab74880092f016abf73ba00074 462 PRINTS PR00481 Cytosol aminopeptidase signature 282 303 5.0E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_00962 1abd39532c59dd6d0302904d3eebad61 277 SUPERFAMILY SSF111331 44 262 1.06E-53 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMC99_00962 1abd39532c59dd6d0302904d3eebad61 277 Pfam PF01513 ATP-NAD kinase 50 236 2.6E-20 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMC99_00962 1abd39532c59dd6d0302904d3eebad61 277 Hamap MF_00361 NAD kinase [nadK]. 23 277 20.241 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMC99_00962 1abd39532c59dd6d0302904d3eebad61 277 Gene3D G3DSA:3.40.50.10330 19 121 1.9E-10 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMC99_00962 1abd39532c59dd6d0302904d3eebad61 277 Gene3D G3DSA:2.60.200.30 122 261 3.1E-26 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AMC99_02601 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 Gene3D G3DSA:3.40.50.720 2 317 3.5E-134 T 11-10-2018 AMC99_02601 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 318 6.8E-100 T 11-10-2018 IPR016040 NAD(P)-binding domain AMC99_02601 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 Gene3D G3DSA:3.90.25.10 197 326 3.5E-134 T 11-10-2018 AMC99_02601 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 332 1.8E-151 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMC99_02601 282f0d9a9ed0526bd9b8f64ba7bcfa53 345 SUPERFAMILY SSF51735 1 333 2.07E-100 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01910 3d99f2b7800939a434e91a9c04348e1a 83 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 76 20.176 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMC99_01910 3d99f2b7800939a434e91a9c04348e1a 83 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 2 46 4.1E-19 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 AMC99_01910 3d99f2b7800939a434e91a9c04348e1a 83 Pfam PF02416 mttA/Hcf106 family 3 51 5.2E-11 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 467 639 37.704 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 Gene3D G3DSA:2.40.30.10 332 439 1.2E-31 T 11-10-2018 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 SUPERFAMILY SSF50447 242 330 2.5E-25 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 20 468 50.596 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 84 99 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 451 633 6.0E-77 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 Gene3D G3DSA:3.40.50.300 445 637 1.0E-78 T 11-10-2018 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 29 439 9.6E-191 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 Gene3D G3DSA:3.40.50.300 6 240 9.7E-70 T 11-10-2018 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 SUPERFAMILY SSF52540 461 636 1.97E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 SUPERFAMILY SSF50465 333 439 1.82E-30 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 SUPERFAMILY SSF52540 24 254 1.74E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 Pfam PF00009 Elongation factor Tu GTP binding domain 27 214 7.1E-43 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 Pfam PF01583 Adenylylsulphate kinase 469 621 1.0E-71 T 11-10-2018 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 Gene3D G3DSA:2.40.30.10 243 329 4.0E-25 T 11-10-2018 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 111 121 4.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 30 43 4.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 164 173 4.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 91 99 4.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00879 f85fdf820b9c35f9026a5d09a4ab5295 639 PRINTS PR00315 GTP-binding elongation factor signature 127 138 4.1E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_00203 db84ed8b270e0b22f2d94f0beb39d516 161 Hamap MF_00678 UPF0262 protein . 4 160 37.652 T 11-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 AMC99_00203 db84ed8b270e0b22f2d94f0beb39d516 161 Pfam PF06793 Uncharacterised protein family (UPF0262) 5 160 2.2E-66 T 11-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 AMC99_00203 db84ed8b270e0b22f2d94f0beb39d516 161 PIRSF PIRSF032146 1 161 2.4E-61 T 11-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 AMC99_02072 a71054bc85cef35ab28db740979b167b 490 Pfam PF00990 Diguanylate cyclase, GGDEF domain 58 210 2.8E-33 T 11-10-2018 IPR000160 GGDEF domain AMC99_02072 a71054bc85cef35ab28db740979b167b 490 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 57 212 9.8E-29 T 11-10-2018 IPR000160 GGDEF domain AMC99_02072 a71054bc85cef35ab28db740979b167b 490 Gene3D G3DSA:3.20.20.450 229 488 1.1E-83 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_02072 a71054bc85cef35ab28db740979b167b 490 SUPERFAMILY SSF55073 62 216 6.43E-37 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_02072 a71054bc85cef35ab28db740979b167b 490 SMART SM00052 225 466 7.3E-88 T 11-10-2018 IPR001633 EAL domain AMC99_02072 a71054bc85cef35ab28db740979b167b 490 Gene3D G3DSA:3.30.70.270 57 228 7.5E-42 T 11-10-2018 AMC99_02072 a71054bc85cef35ab28db740979b167b 490 Pfam PF00563 EAL domain 231 460 9.7E-65 T 11-10-2018 IPR001633 EAL domain AMC99_02072 a71054bc85cef35ab28db740979b167b 490 SMART SM00267 46 215 1.3E-34 T 11-10-2018 IPR000160 GGDEF domain AMC99_02072 a71054bc85cef35ab28db740979b167b 490 SUPERFAMILY SSF141868 231 472 3.66E-78 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_02641 7ae4c6a3f018d483a16413cbcf02d1db 234 Pfam PF00459 Inositol monophosphatase family 10 203 2.5E-36 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02641 7ae4c6a3f018d483a16413cbcf02d1db 234 SUPERFAMILY SSF56655 3 223 7.07E-54 T 11-10-2018 AMC99_02641 7ae4c6a3f018d483a16413cbcf02d1db 234 Gene3D G3DSA:3.40.190.80 133 228 1.4E-15 T 11-10-2018 AMC99_02641 7ae4c6a3f018d483a16413cbcf02d1db 234 Gene3D G3DSA:3.30.540.10 1 114 6.6E-31 T 11-10-2018 AMC99_02641 7ae4c6a3f018d483a16413cbcf02d1db 234 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 54 67 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMC99_02641 7ae4c6a3f018d483a16413cbcf02d1db 234 PRINTS PR00377 Inositol monophosphatase superfamily signature 54 70 7.8E-17 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02641 7ae4c6a3f018d483a16413cbcf02d1db 234 PRINTS PR00377 Inositol monophosphatase superfamily signature 136 157 7.8E-17 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02641 7ae4c6a3f018d483a16413cbcf02d1db 234 PRINTS PR00377 Inositol monophosphatase superfamily signature 103 126 7.8E-17 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02641 7ae4c6a3f018d483a16413cbcf02d1db 234 PRINTS PR00377 Inositol monophosphatase superfamily signature 168 192 7.8E-17 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00179 85af16c01062e7ccd012978c85704bb6 384 Gene3D G3DSA:3.40.50.2000 31 376 1.4E-30 T 11-10-2018 AMC99_00179 85af16c01062e7ccd012978c85704bb6 384 Pfam PF00534 Glycosyl transferases group 1 216 348 1.8E-12 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMC99_00179 85af16c01062e7ccd012978c85704bb6 384 SUPERFAMILY SSF53756 66 382 5.83E-36 T 11-10-2018 AMC99_00179 85af16c01062e7ccd012978c85704bb6 384 Gene3D G3DSA:3.40.50.2000 189 361 1.4E-30 T 11-10-2018 AMC99_02324 7430e9819baf94568b58868cc098a2f2 301 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 20 289 17.288 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMC99_02324 7430e9819baf94568b58868cc098a2f2 301 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 164 176 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMC99_02324 7430e9819baf94568b58868cc098a2f2 301 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 23 284 5.2E-70 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMC99_02324 7430e9819baf94568b58868cc098a2f2 301 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 23 288 7.0E-59 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AMC99_02422 608677a9f033fdd659d3b589294d2999 352 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 6.7E-136 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AMC99_02422 608677a9f033fdd659d3b589294d2999 352 SUPERFAMILY SSF46548 166 256 7.85E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_02422 608677a9f033fdd659d3b589294d2999 352 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 7.6E-18 T 11-10-2018 AMC99_02422 608677a9f033fdd659d3b589294d2999 352 Pfam PF08331 Domain of unknown function (DUF1730) 63 140 4.5E-24 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 AMC99_02422 608677a9f033fdd659d3b589294d2999 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_02422 608677a9f033fdd659d3b589294d2999 352 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 316 45.791 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 AMC99_00475 29ab774f507ecfc9fa25e2e7ee8877b8 438 Gene3D G3DSA:1.20.1250.20 19 211 5.5E-41 T 11-10-2018 AMC99_00475 29ab774f507ecfc9fa25e2e7ee8877b8 438 Pfam PF07690 Major Facilitator Superfamily 33 384 7.1E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_00475 29ab774f507ecfc9fa25e2e7ee8877b8 438 SUPERFAMILY SSF103473 17 425 1.01E-66 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00475 29ab774f507ecfc9fa25e2e7ee8877b8 438 Gene3D G3DSA:1.20.1250.20 225 427 7.3E-17 T 11-10-2018 AMC99_02079 f3746e75ecc09249c379fa495fbfb890 652 SUPERFAMILY SSF51905 142 548 1.15E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02079 f3746e75ecc09249c379fa495fbfb890 652 Pfam PF00743 Flavin-binding monooxygenase-like 141 344 1.7E-15 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMC99_02079 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 335 5.5E-7 T 11-10-2018 AMC99_02079 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 164 5.5E-7 T 11-10-2018 AMC99_02079 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 535 550 5.5E-7 T 11-10-2018 AMC99_02079 f3746e75ecc09249c379fa495fbfb890 652 Gene3D G3DSA:3.50.50.60 130 385 3.5E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02079 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 162 1.0E-5 T 11-10-2018 AMC99_02079 f3746e75ecc09249c379fa495fbfb890 652 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 310 328 1.0E-5 T 11-10-2018 AMC99_02079 f3746e75ecc09249c379fa495fbfb890 652 Gene3D G3DSA:3.50.50.60 462 630 9.5E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01316 32933e13a141fad0e6192d4e2cbab1e7 179 Pfam PF00994 Probable molybdopterin binding domain 15 160 1.3E-27 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_01316 32933e13a141fad0e6192d4e2cbab1e7 179 SMART SM00852 15 163 1.0E-23 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_01316 32933e13a141fad0e6192d4e2cbab1e7 179 PIRSF PIRSF006443 1 171 1.5E-53 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 AMC99_01316 32933e13a141fad0e6192d4e2cbab1e7 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 155 1.2E-27 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_01316 32933e13a141fad0e6192d4e2cbab1e7 179 SUPERFAMILY SSF53218 7 175 1.7E-41 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_01316 32933e13a141fad0e6192d4e2cbab1e7 179 Gene3D G3DSA:3.40.980.10 4 176 1.3E-43 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_01316 32933e13a141fad0e6192d4e2cbab1e7 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 174 4.5E-69 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 AMC99_01363 badf975476604e0db795e78e23765336 554 Gene3D G3DSA:3.40.50.300 1 272 5.4E-45 T 11-10-2018 AMC99_01363 badf975476604e0db795e78e23765336 554 Gene3D G3DSA:3.40.50.300 273 553 1.4E-50 T 11-10-2018 AMC99_01363 badf975476604e0db795e78e23765336 554 SUPERFAMILY SSF52540 1 216 7.64E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01363 badf975476604e0db795e78e23765336 554 SUPERFAMILY SSF52540 2 504 1.95E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01363 badf975476604e0db795e78e23765336 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 8.6E-16 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMC99_01363 badf975476604e0db795e78e23765336 554 PIRSF PIRSF003128 1 554 1.2E-149 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMC99_01363 badf975476604e0db795e78e23765336 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 3.1E-136 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 Gene3D G3DSA:3.30.360.10 91 198 1.9E-76 T 11-10-2018 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 SUPERFAMILY SSF55347 91 200 3.49E-34 T 11-10-2018 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 114 131 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 229 28.126 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 24 88 2.5E-14 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 92 228 6.3E-41 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 30 229 2.0E-62 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 PIRSF PIRSF000161 1 230 2.8E-69 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 Gene3D G3DSA:3.40.50.720 17 228 1.9E-76 T 11-10-2018 AMC99_00232 d6efa1392618a347e165aa74f75d5d83 230 SUPERFAMILY SSF51735 1 230 1.88E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 Gene3D G3DSA:3.40.50.720 4 326 6.2E-145 T 11-10-2018 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 Gene3D G3DSA:3.30.360.10 152 316 6.2E-145 T 11-10-2018 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 7.3E-65 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 2.1E-131 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 8.8E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 8.8E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 8.8E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 8.8E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 8.8E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 SUPERFAMILY SSF55347 153 315 6.55E-70 T 11-10-2018 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 SUPERFAMILY SSF51735 4 168 1.39E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 SMART SM00846 3 153 6.9E-89 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 PIRSF PIRSF000149 1 335 2.0E-135 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00983 1426cac0850b11cea1dd90b2e62f84ba 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 104 2.6E-34 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00393 8ea09a162d0d6052955b192a3c72851f 211 Pfam PF02586 SOS response associated peptidase (SRAP) 30 190 1.7E-7 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) AMC99_00393 8ea09a162d0d6052955b192a3c72851f 211 SUPERFAMILY SSF143081 5 199 5.62E-23 T 11-10-2018 IPR036590 SOS response associated peptidase-like AMC99_00393 8ea09a162d0d6052955b192a3c72851f 211 Gene3D G3DSA:3.90.1680.10 52 207 1.1E-11 T 11-10-2018 IPR036590 SOS response associated peptidase-like AMC99_02266 d5594778f2781cc233e48d4a6950d34f 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 183 5.3E-50 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AMC99_02266 d5594778f2781cc233e48d4a6950d34f 184 Hamap MF_00146 dCTP deaminase [dcd]. 2 184 29.254 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AMC99_02266 d5594778f2781cc233e48d4a6950d34f 184 Pfam PF00692 dUTPase 78 180 1.0E-4 T 11-10-2018 IPR029054 dUTPase-like AMC99_02266 d5594778f2781cc233e48d4a6950d34f 184 Gene3D G3DSA:2.70.40.10 1 156 1.2E-52 T 11-10-2018 IPR036157 dUTPase-like superfamily AMC99_02266 d5594778f2781cc233e48d4a6950d34f 184 SUPERFAMILY SSF51283 2 183 3.79E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily AMC99_02441 48ec86c7bd3a9514d82c98fb6a850bc9 163 Pfam PF01475 Ferric uptake regulator family 35 151 1.8E-11 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMC99_02441 48ec86c7bd3a9514d82c98fb6a850bc9 163 Gene3D G3DSA:1.10.10.10 17 104 1.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02441 48ec86c7bd3a9514d82c98fb6a850bc9 163 SUPERFAMILY SSF46785 28 159 1.2E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02441 48ec86c7bd3a9514d82c98fb6a850bc9 163 Gene3D G3DSA:3.30.1490.190 108 163 6.3E-15 T 11-10-2018 AMC99_02522 dadc3ab5980e8bbef3946d3fb2d64490 400 Pfam PF06580 Histidine kinase 207 287 1.1E-22 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMC99_02522 dadc3ab5980e8bbef3946d3fb2d64490 400 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 306 397 5.3E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02522 dadc3ab5980e8bbef3946d3fb2d64490 400 SMART SM00387 298 400 8.8E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02522 dadc3ab5980e8bbef3946d3fb2d64490 400 Gene3D G3DSA:3.30.565.10 264 396 5.9E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02522 dadc3ab5980e8bbef3946d3fb2d64490 400 SUPERFAMILY SSF55874 286 396 5.37E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00608 85747e03ee223090dd2d1a2862b9fb67 175 SUPERFAMILY SSF53254 3 165 1.91E-23 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMC99_00608 85747e03ee223090dd2d1a2862b9fb67 175 Gene3D G3DSA:3.40.50.1240 1 166 2.7E-37 T 11-10-2018 IPR029033 Histidine phosphatase superfamily AMC99_00608 85747e03ee223090dd2d1a2862b9fb67 175 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 66 4.2E-8 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 AMC99_01863 e0c576e67771200645f718763163efcf 323 Gene3D G3DSA:3.30.465.10 114 237 1.1E-32 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMC99_01863 e0c576e67771200645f718763163efcf 323 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 323 92.562 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01863 e0c576e67771200645f718763163efcf 323 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 51 320 2.2E-55 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01863 e0c576e67771200645f718763163efcf 323 Gene3D G3DSA:3.90.78.10 238 323 5.6E-32 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01863 e0c576e67771200645f718763163efcf 323 SUPERFAMILY SSF56194 217 321 4.19E-36 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01863 e0c576e67771200645f718763163efcf 323 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 222 320 3.8E-29 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01863 e0c576e67771200645f718763163efcf 323 Gene3D G3DSA:3.30.43.10 30 108 1.4E-18 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AMC99_01863 e0c576e67771200645f718763163efcf 323 Pfam PF01565 FAD binding domain 60 187 3.9E-15 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMC99_01863 e0c576e67771200645f718763163efcf 323 SUPERFAMILY SSF56176 45 229 1.24E-37 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMC99_02596 a6e60b31b3667e7cbe1a492c566ca134 337 PRINTS PR01713 Nucleotide sugar epimerase signature 297 314 1.5E-19 T 11-10-2018 AMC99_02596 a6e60b31b3667e7cbe1a492c566ca134 337 PRINTS PR01713 Nucleotide sugar epimerase signature 30 46 1.5E-19 T 11-10-2018 AMC99_02596 a6e60b31b3667e7cbe1a492c566ca134 337 PRINTS PR01713 Nucleotide sugar epimerase signature 258 273 1.5E-19 T 11-10-2018 AMC99_02596 a6e60b31b3667e7cbe1a492c566ca134 337 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 1.5E-19 T 11-10-2018 AMC99_02596 a6e60b31b3667e7cbe1a492c566ca134 337 Gene3D G3DSA:3.40.50.720 5 318 5.1E-90 T 11-10-2018 AMC99_02596 a6e60b31b3667e7cbe1a492c566ca134 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 326 6.6E-54 T 11-10-2018 IPR016040 NAD(P)-binding domain AMC99_02596 a6e60b31b3667e7cbe1a492c566ca134 337 Gene3D G3DSA:3.90.25.10 181 330 5.1E-90 T 11-10-2018 AMC99_02596 a6e60b31b3667e7cbe1a492c566ca134 337 SUPERFAMILY SSF51735 1 335 1.55E-85 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00230 58eff19fce97c23e7a64412413e61318 216 Gene3D G3DSA:1.10.340.30 21 132 9.9E-73 T 11-10-2018 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 Gene3D G3DSA:1.10.1670.10 11 203 9.9E-73 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 PIRSF PIRSF001435 1 212 5.0E-47 T 11-10-2018 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.4E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.1E-77 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 SMART SM00525 186 206 0.0032 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.1E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 SMART SM00478 38 185 6.2E-53 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.042 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 SUPERFAMILY SSF48150 1 208 1.29E-67 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMC99_00230 58eff19fce97c23e7a64412413e61318 216 Pfam PF00633 Helix-hairpin-helix motif 99 127 6.1E-10 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AMC99_01927 82603cf877fcd7043b15a98d8f0f7a99 428 Gene3D G3DSA:3.40.50.300 151 389 1.1E-39 T 11-10-2018 AMC99_01927 82603cf877fcd7043b15a98d8f0f7a99 428 SUPERFAMILY SSF52172 27 142 2.49E-8 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01927 82603cf877fcd7043b15a98d8f0f7a99 428 SUPERFAMILY SSF52540 153 388 4.56E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01927 82603cf877fcd7043b15a98d8f0f7a99 428 Gene3D G3DSA:3.40.50.2300 16 134 1.2E-30 T 11-10-2018 AMC99_01008 bfdf39a468414eda4f79eb7987e74003 328 Gene3D G3DSA:1.20.1530.20 5 322 9.5E-27 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMC99_01008 bfdf39a468414eda4f79eb7987e74003 328 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 11 317 5.4E-67 T 11-10-2018 IPR016833 Putative sodium bile acid cotransporter AMC99_01530 44ad7165fe156c0387ffd30de9982ca0 114 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 114 3.1E-39 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01530 44ad7165fe156c0387ffd30de9982ca0 114 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 114 27.504 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01530 44ad7165fe156c0387ffd30de9982ca0 114 Gene3D G3DSA:3.30.420.100 1 114 4.9E-39 T 11-10-2018 AMC99_01530 44ad7165fe156c0387ffd30de9982ca0 114 SUPERFAMILY SSF53137 9 112 6.11E-44 T 11-10-2018 AMC99_01530 44ad7165fe156c0387ffd30de9982ca0 114 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 114 6.8E-38 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_02374 443344ec7340fd0aba7e26907b07d21e 457 Pfam PF04932 O-Antigen ligase 208 359 4.7E-10 T 11-10-2018 IPR007016 O-antigen ligase-related AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 492 1.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 1.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 1.1E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 SUPERFAMILY SSF55874 359 494 9.3E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 SUPERFAMILY SSF47384 270 340 3.92E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 491 3.7E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 Pfam PF08521 Two-component sensor kinase N-terminal 68 206 1.1E-6 T 11-10-2018 IPR013727 Two-component sensor kinase, N-terminal AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 Gene3D G3DSA:3.30.565.10 349 493 1.2E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 Gene3D G3DSA:1.10.287.130 233 337 7.3E-7 T 11-10-2018 AMC99_00663 b50e29845ec73eeac62dde9acc87c9f7 495 SMART SM00387 386 495 2.2E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01449 1f7a3f061628da3c657ea0aa467b0bd3 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 178 2.3E-46 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AMC99_01449 1f7a3f061628da3c657ea0aa467b0bd3 183 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMC99_01449 1f7a3f061628da3c657ea0aa467b0bd3 183 Pfam PF03602 Conserved hypothetical protein 95 1 177 1.5E-47 T 11-10-2018 AMC99_01449 1f7a3f061628da3c657ea0aa467b0bd3 183 SUPERFAMILY SSF53335 1 177 1.08E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01449 1f7a3f061628da3c657ea0aa467b0bd3 183 Gene3D G3DSA:3.40.50.150 1 182 8.1E-52 T 11-10-2018 AMC99_01449 1f7a3f061628da3c657ea0aa467b0bd3 183 PIRSF PIRSF004553 1 181 1.3E-52 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 SUPERFAMILY SSF54919 1 139 2.49E-55 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.047 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.4E-36 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.4E-36 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.4E-36 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.4E-36 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.4E-36 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 SMART SM00562 3 140 4.8E-77 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 Pfam PF00334 Nucleoside diphosphate kinase 5 138 9.6E-53 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_00868 ea370010f33a8a8c8e4908f4e1189433 140 Gene3D G3DSA:3.30.70.141 1 139 2.4E-54 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 SUPERFAMILY SSF82679 1 104 4.58E-33 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 175 1.1E-62 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 Gene3D G3DSA:2.30.30.30 117 177 3.8E-25 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 SUPERFAMILY SSF50104 121 175 4.13E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 Pfam PF02357 Transcription termination factor nusG 3 104 6.5E-23 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 SMART SM00739 123 150 9.1E-4 T 11-10-2018 IPR005824 KOW AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 Gene3D G3DSA:3.30.70.940 1 116 1.6E-38 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 177 23.841 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 4.0E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 4.0E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 4.0E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 Pfam PF00467 KOW motif 127 156 1.2E-5 T 11-10-2018 IPR005824 KOW AMC99_02194 d299559b0e91226e3cca5a78cb000870 178 SMART SM00738 1 109 3.0E-39 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AMC99_01979 5a39117b42734dddbf4a6ecf6b85db3e 454 Gene3D G3DSA:3.90.550.10 48 278 2.3E-9 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01979 5a39117b42734dddbf4a6ecf6b85db3e 454 SUPERFAMILY SSF53448 56 303 7.13E-13 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01979 5a39117b42734dddbf4a6ecf6b85db3e 454 Pfam PF13641 Glycosyltransferase like family 2 54 301 6.4E-34 T 11-10-2018 AMC99_00645 9346c88178a5ba5f78cab65042f5e3bd 194 SUPERFAMILY SSF55729 8 190 1.24E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_00645 9346c88178a5ba5f78cab65042f5e3bd 194 Pfam PF00583 Acetyltransferase (GNAT) family 111 172 8.0E-10 T 11-10-2018 IPR000182 GNAT domain AMC99_00645 9346c88178a5ba5f78cab65042f5e3bd 194 Gene3D G3DSA:3.40.630.30 6 194 9.1E-40 T 11-10-2018 AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 SUPERFAMILY SSF52922 327 463 2.36E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 SUPERFAMILY SSF52518 142 343 5.89E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 Pfam PF00364 Biotin-requiring enzyme 4 77 3.3E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 Gene3D G3DSA:3.40.50.970 142 329 1.9E-81 T 11-10-2018 AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 SMART SM00861 143 318 1.0E-58 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 Gene3D G3DSA:2.40.50.100 2 101 1.2E-32 T 11-10-2018 AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 Pfam PF02779 Transketolase, pyrimidine binding domain 142 316 2.9E-48 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 Pfam PF02780 Transketolase, C-terminal domain 333 455 1.3E-40 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 SUPERFAMILY SSF51230 1 97 2.49E-29 T 11-10-2018 IPR011053 Single hybrid motif AMC99_01209 dc54ab42219f695277f1e93a8b910ed8 466 Gene3D G3DSA:3.40.50.920 330 464 1.2E-48 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_00871 c4cf94b6b3d2b2faff33b113af5cd11e 321 Gene3D G3DSA:3.40.50.170 2 194 1.5E-61 T 11-10-2018 AMC99_00871 c4cf94b6b3d2b2faff33b113af5cd11e 321 Pfam PF00551 Formyl transferase 6 183 1.6E-52 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_00871 c4cf94b6b3d2b2faff33b113af5cd11e 321 SUPERFAMILY SSF53328 6 190 2.22E-57 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_00871 c4cf94b6b3d2b2faff33b113af5cd11e 321 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 190 26.964 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AMC99_00871 c4cf94b6b3d2b2faff33b113af5cd11e 321 SUPERFAMILY SSF142906 199 313 1.05E-12 T 11-10-2018 IPR038056 YjbR-like superfamily AMC99_00871 c4cf94b6b3d2b2faff33b113af5cd11e 321 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 5 188 8.8E-55 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AMC99_00871 c4cf94b6b3d2b2faff33b113af5cd11e 321 Gene3D G3DSA:3.90.1150.30 195 319 1.6E-5 T 11-10-2018 IPR038056 YjbR-like superfamily AMC99_00871 c4cf94b6b3d2b2faff33b113af5cd11e 321 Pfam PF04237 YjbR 206 304 3.7E-13 T 11-10-2018 IPR007351 Uncharacterised protein YjbR AMC99_01269 8c688756fded1c3f711c23a6095c7baa 523 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 100 5.1E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_01269 8c688756fded1c3f711c23a6095c7baa 523 Gene3D G3DSA:1.25.40.10 251 503 4.5E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01269 8c688756fded1c3f711c23a6095c7baa 523 SUPERFAMILY SSF46894 8 102 1.5E-15 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_01269 8c688756fded1c3f711c23a6095c7baa 523 SUPERFAMILY SSF48452 289 479 1.1E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01269 8c688756fded1c3f711c23a6095c7baa 523 Gene3D G3DSA:1.10.10.10 2 102 3.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01269 8c688756fded1c3f711c23a6095c7baa 523 SMART SM00862 26 101 1.2E-10 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_01507 97a138de0314a6508058c65bb659b01a 948 SUPERFAMILY SSF52518 570 785 7.26E-52 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01507 97a138de0314a6508058c65bb659b01a 948 Gene3D G3DSA:3.40.50.12470 552 795 2.6E-166 T 11-10-2018 AMC99_01507 97a138de0314a6508058c65bb659b01a 948 SUPERFAMILY SSF52518 120 528 7.23E-87 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01507 97a138de0314a6508058c65bb659b01a 948 Gene3D G3DSA:3.40.50.970 152 520 4.5E-152 T 11-10-2018 AMC99_01507 97a138de0314a6508058c65bb659b01a 948 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 62 927 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMC99_01507 97a138de0314a6508058c65bb659b01a 948 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 783 929 2.5E-48 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMC99_01507 97a138de0314a6508058c65bb659b01a 948 Gene3D G3DSA:1.10.287.1150 72 151 7.7E-18 T 11-10-2018 AMC99_01507 97a138de0314a6508058c65bb659b01a 948 SMART SM00861 587 778 6.9E-58 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_01507 97a138de0314a6508058c65bb659b01a 948 Pfam PF02779 Transketolase, pyrimidine binding domain 587 779 7.7E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_01507 97a138de0314a6508058c65bb659b01a 948 Pfam PF00676 Dehydrogenase E1 component 200 514 3.1E-56 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMC99_01507 97a138de0314a6508058c65bb659b01a 948 PIRSF PIRSF000157 23 931 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AMC99_01507 97a138de0314a6508058c65bb659b01a 948 Gene3D G3DSA:3.40.50.11610 715 925 2.6E-166 T 11-10-2018 AMC99_02445 97e3fc22bd556bc0ee57650795644ef3 623 Gene3D G3DSA:1.50.10.100 141 356 2.3E-12 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 AMC99_02445 97e3fc22bd556bc0ee57650795644ef3 623 Pfam PF07940 Heparinase II/III-like protein 365 617 2.3E-54 T 11-10-2018 IPR012480 Heparinase II/III-like GO:0016829 AMC99_02051 13f4e8709bce73b5b78f7eea8a0dcc09 333 Gene3D G3DSA:3.40.50.10800 179 271 5.0E-106 T 11-10-2018 AMC99_02051 13f4e8709bce73b5b78f7eea8a0dcc09 333 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 12 316 2.1E-110 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMC99_02051 13f4e8709bce73b5b78f7eea8a0dcc09 333 SUPERFAMILY SSF142754 12 315 1.83E-114 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMC99_02051 13f4e8709bce73b5b78f7eea8a0dcc09 333 Hamap MF_00568 Quinolinate synthase A [nadA]. 11 315 43.139 T 11-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMC99_02051 13f4e8709bce73b5b78f7eea8a0dcc09 333 Pfam PF02445 Quinolinate synthetase A protein 16 314 2.7E-113 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMC99_02051 13f4e8709bce73b5b78f7eea8a0dcc09 333 Gene3D G3DSA:3.40.50.10800 15 296 5.0E-106 T 11-10-2018 AMC99_02051 13f4e8709bce73b5b78f7eea8a0dcc09 333 Gene3D G3DSA:3.40.50.10800 95 314 5.0E-106 T 11-10-2018 AMC99_01746 8cdd1fb29e1c2585a8c41c2c6e4b0ce6 534 Pfam PF02233 NAD(P) transhydrogenase beta subunit 44 531 2.1E-192 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMC99_01746 8cdd1fb29e1c2585a8c41c2c6e4b0ce6 534 Gene3D G3DSA:3.40.50.1220 355 534 1.7E-81 T 11-10-2018 AMC99_01746 8cdd1fb29e1c2585a8c41c2c6e4b0ce6 534 SUPERFAMILY SSF52467 361 533 1.19E-72 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMC99_01196 52083b4e81cbb1f45cad5fc91f10d390 318 PIRSF PIRSF005963 2 318 7.5E-132 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMC99_01196 52083b4e81cbb1f45cad5fc91f10d390 318 TIGRFAM TIGR00510 lipA: lipoyl synthase 15 303 4.1E-114 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMC99_01196 52083b4e81cbb1f45cad5fc91f10d390 318 SMART SM00729 67 273 1.4E-7 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_01196 52083b4e81cbb1f45cad5fc91f10d390 318 Hamap MF_00206 Lipoyl synthase [lipA]. 1 306 147.971 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMC99_01196 52083b4e81cbb1f45cad5fc91f10d390 318 SUPERFAMILY SSF102114 34 298 2.49E-59 T 11-10-2018 AMC99_01196 52083b4e81cbb1f45cad5fc91f10d390 318 Pfam PF04055 Radical SAM superfamily 74 233 2.4E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_01196 52083b4e81cbb1f45cad5fc91f10d390 318 Gene3D G3DSA:3.20.20.70 65 276 5.2E-18 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01196 52083b4e81cbb1f45cad5fc91f10d390 318 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 12 56 7.2E-11 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMC99_02459 22fc1126a8b0309f53d34217440475bd 1021 Gene3D G3DSA:2.170.130.10 34 179 2.8E-20 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02459 22fc1126a8b0309f53d34217440475bd 1021 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 166 1.3E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_02459 22fc1126a8b0309f53d34217440475bd 1021 SUPERFAMILY SSF56935 37 1019 7.33E-86 T 11-10-2018 AMC99_02459 22fc1126a8b0309f53d34217440475bd 1021 Pfam PF00593 TonB dependent receptor 466 1019 2.8E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02459 22fc1126a8b0309f53d34217440475bd 1021 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 46 1020 1.1E-182 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AMC99_00693 fdc2b7e8a8548865394fecd006aeedc2 228 SMART SM00935 16 172 2.4E-7 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AMC99_00693 fdc2b7e8a8548865394fecd006aeedc2 228 Pfam PF03938 Outer membrane protein (OmpH-like) 16 170 3.4E-8 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AMC99_00693 fdc2b7e8a8548865394fecd006aeedc2 228 SUPERFAMILY SSF111384 30 172 1.23E-13 T 11-10-2018 AMC99_00693 fdc2b7e8a8548865394fecd006aeedc2 228 Gene3D G3DSA:3.30.910.20 24 200 3.3E-15 T 11-10-2018 IPR024930 Skp domain superfamily AMC99_01411 e814a51c6b05d40ecb311095935856be 246 Gene3D G3DSA:3.40.1280.10 2 175 4.5E-55 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_01411 e814a51c6b05d40ecb311095935856be 246 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 25 223 1.6E-47 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_01411 e814a51c6b05d40ecb311095935856be 246 Gene3D G3DSA:1.10.1270.20 176 233 1.1E-28 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_01411 e814a51c6b05d40ecb311095935856be 246 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 246 98.297 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_01411 e814a51c6b05d40ecb311095935856be 246 PIRSF PIRSF000386 3 245 1.3E-83 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_01411 e814a51c6b05d40ecb311095935856be 246 SUPERFAMILY SSF75217 2 230 7.19E-86 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMC99_01411 e814a51c6b05d40ecb311095935856be 246 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 6 231 1.9E-73 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AMC99_02188 706416a5f98c52297f43a4c84b559b13 133 Pfam PF11162 Protein of unknown function (DUF2946) 13 130 3.8E-5 T 11-10-2018 IPR021333 Protein of unknown function DUF2946 AMC99_01057 6ee04a376e938888beedfa069dcb7235 301 Gene3D G3DSA:1.10.600.10 7 301 2.5E-101 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMC99_01057 6ee04a376e938888beedfa069dcb7235 301 SUPERFAMILY SSF48576 10 293 4.32E-82 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMC99_01057 6ee04a376e938888beedfa069dcb7235 301 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 220 232 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AMC99_01057 6ee04a376e938888beedfa069dcb7235 301 Pfam PF00348 Polyprenyl synthetase 39 277 9.3E-55 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AMC99_01306 e16bed101d1832eebe5cc9cf79115d6c 260 TIGRFAM TIGR03100 hydr1_PEP: exosortase A system-associated hydrolase 1 5 258 1.3E-65 T 11-10-2018 IPR017531 Hydrolase, ortholog 1, exosortase system type 1 associated AMC99_01306 e16bed101d1832eebe5cc9cf79115d6c 260 Gene3D G3DSA:3.40.50.1820 11 260 1.8E-15 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01306 e16bed101d1832eebe5cc9cf79115d6c 260 Pfam PF12146 Serine aminopeptidase, S33 39 222 9.5E-8 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMC99_01306 e16bed101d1832eebe5cc9cf79115d6c 260 SUPERFAMILY SSF53474 6 258 9.51E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02754 1b901a45d4726e6e7d80103a6b610dbe 188 Pfam PF01923 Cobalamin adenosyltransferase 7 170 4.0E-57 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMC99_02754 1b901a45d4726e6e7d80103a6b610dbe 188 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 173 1.0E-50 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMC99_02754 1b901a45d4726e6e7d80103a6b610dbe 188 SUPERFAMILY SSF89028 6 183 1.63E-57 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMC99_02754 1b901a45d4726e6e7d80103a6b610dbe 188 Gene3D G3DSA:1.20.1200.10 17 187 9.8E-54 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMC99_02754 1b901a45d4726e6e7d80103a6b610dbe 188 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 182 1.9E-52 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 Pfam PF07732 Multicopper oxidase 64 171 2.1E-34 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 ProSitePatterns PS00079 Multicopper oxidases signature 1. 573 593 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 Gene3D G3DSA:2.60.40.420 467 598 3.1E-32 T 11-10-2018 IPR008972 Cupredoxin AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 SUPERFAMILY SSF49503 175 373 1.77E-48 T 11-10-2018 IPR008972 Cupredoxin AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 Pfam PF00394 Multicopper oxidase 181 347 4.9E-21 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 SUPERFAMILY SSF49503 54 203 1.24E-35 T 11-10-2018 IPR008972 Cupredoxin AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 Gene3D G3DSA:2.60.40.420 48 170 5.4E-34 T 11-10-2018 IPR008972 Cupredoxin AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 Gene3D G3DSA:2.60.40.420 179 375 6.1E-32 T 11-10-2018 IPR008972 Cupredoxin AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 Pfam PF07731 Multicopper oxidase 478 597 1.7E-26 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 ProSitePatterns PS00080 Multicopper oxidases signature 2. 578 589 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 33 0.0013 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 6 595 7.5E-230 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AMC99_00093 e0a205117380430f1ab4819ca2cfb0d4 610 SUPERFAMILY SSF49503 437 595 1.92E-37 T 11-10-2018 IPR008972 Cupredoxin AMC99_01104 78f8115894634a104543142a7bdff8af 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 9.1E-152 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMC99_01104 78f8115894634a104543142a7bdff8af 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01104 78f8115894634a104543142a7bdff8af 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01104 78f8115894634a104543142a7bdff8af 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01104 78f8115894634a104543142a7bdff8af 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01104 78f8115894634a104543142a7bdff8af 366 SUPERFAMILY SSF52540 3 304 2.52E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01104 78f8115894634a104543142a7bdff8af 366 Gene3D G3DSA:3.40.50.300 4 281 2.1E-149 T 11-10-2018 AMC99_01104 78f8115894634a104543142a7bdff8af 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 43.17 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMC99_01104 78f8115894634a104543142a7bdff8af 366 SUPERFAMILY SSF81271 282 363 7.85E-36 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMC99_01104 78f8115894634a104543142a7bdff8af 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 3.2E-40 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AMC99_01104 78f8115894634a104543142a7bdff8af 366 Gene3D G3DSA:1.10.150.300 114 202 2.1E-149 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AMC99_01104 78f8115894634a104543142a7bdff8af 366 PIRSF PIRSF006641 1 366 1.1E-155 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AMC99_01104 78f8115894634a104543142a7bdff8af 366 Pfam PF01926 50S ribosome-binding GTPase 4 121 6.8E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01104 78f8115894634a104543142a7bdff8af 366 Gene3D G3DSA:3.10.20.30 49 364 2.1E-149 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_02711 016dff41182a651d61d248df7049d9cb 529 SUPERFAMILY SSF54373 288 469 1.28E-53 T 11-10-2018 AMC99_02711 016dff41182a651d61d248df7049d9cb 529 SUPERFAMILY SSF51905 3 526 7.63E-84 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02711 016dff41182a651d61d248df7049d9cb 529 Gene3D G3DSA:4.10.450.10 37 193 3.0E-172 T 11-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 AMC99_02711 016dff41182a651d61d248df7049d9cb 529 Gene3D G3DSA:3.30.410.40 148 466 3.0E-172 T 11-10-2018 AMC99_02711 016dff41182a651d61d248df7049d9cb 529 Pfam PF05199 GMC oxidoreductase 384 519 9.5E-40 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 AMC99_02711 016dff41182a651d61d248df7049d9cb 529 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 79 102 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMC99_02711 016dff41182a651d61d248df7049d9cb 529 Pfam PF00732 GMC oxidoreductase 4 292 3.2E-84 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMC99_02711 016dff41182a651d61d248df7049d9cb 529 Gene3D G3DSA:1.10.1220.110 94 147 3.0E-172 T 11-10-2018 AMC99_02711 016dff41182a651d61d248df7049d9cb 529 Gene3D G3DSA:3.50.50.60 4 523 3.0E-172 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02711 016dff41182a651d61d248df7049d9cb 529 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 251 265 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMC99_02711 016dff41182a651d61d248df7049d9cb 529 PIRSF PIRSF000137 1 529 2.7E-139 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 138 150 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 Gene3D G3DSA:2.40.110.10 135 241 1.1E-35 T 11-10-2018 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 1.5E-33 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 229 6.9E-20 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 SUPERFAMILY SSF56645 7 241 4.45E-77 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 Gene3D G3DSA:1.20.140.10 243 394 8.1E-37 T 11-10-2018 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 388 3.0E-24 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 SUPERFAMILY SSF47203 245 392 2.58E-40 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00807 c270f0b4d9971205132836877b8bfe7f 394 Gene3D G3DSA:1.10.540.10 3 134 1.4E-41 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_01756 c027302f0fa9732ce8fbdda923769c50 312 Gene3D G3DSA:1.20.58.1130 10 201 1.0E-77 T 11-10-2018 AMC99_01756 c027302f0fa9732ce8fbdda923769c50 312 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 302 2.8E-56 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 AMC99_01756 c027302f0fa9732ce8fbdda923769c50 312 Gene3D G3DSA:1.20.1420.30 35 302 1.0E-77 T 11-10-2018 AMC99_01756 c027302f0fa9732ce8fbdda923769c50 312 Pfam PF01699 Sodium/calcium exchanger protein 7 141 4.1E-17 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMC99_01756 c027302f0fa9732ce8fbdda923769c50 312 Pfam PF01699 Sodium/calcium exchanger protein 170 310 3.9E-22 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 AMC99_01838 e13f7ddf234af3c158bcb4191043e4d5 280 SMART SM00450 5 129 1.1E-18 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_01838 e13f7ddf234af3c158bcb4191043e4d5 280 SMART SM00450 152 273 2.0E-11 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_01838 e13f7ddf234af3c158bcb4191043e4d5 280 ProSitePatterns PS00380 Rhodanese signature 1. 39 50 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMC99_01838 e13f7ddf234af3c158bcb4191043e4d5 280 Gene3D G3DSA:3.40.250.10 151 275 1.6E-38 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_01838 e13f7ddf234af3c158bcb4191043e4d5 280 SUPERFAMILY SSF52821 156 276 6.29E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_01838 e13f7ddf234af3c158bcb4191043e4d5 280 SUPERFAMILY SSF52821 3 139 4.85E-38 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_01838 e13f7ddf234af3c158bcb4191043e4d5 280 Pfam PF00581 Rhodanese-like domain 7 125 6.9E-13 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_01838 e13f7ddf234af3c158bcb4191043e4d5 280 Pfam PF00581 Rhodanese-like domain 156 269 7.3E-10 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_01838 e13f7ddf234af3c158bcb4191043e4d5 280 Gene3D G3DSA:3.40.250.10 3 143 2.8E-43 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 30 488 27.822 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 Gene3D G3DSA:1.10.8.60 319 391 5.4E-19 T 11-10-2018 AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 Gene3D G3DSA:1.10.1750.10 396 489 9.2E-34 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 Gene3D G3DSA:3.40.50.300 143 317 6.9E-37 T 11-10-2018 AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 SUPERFAMILY SSF48295 386 488 2.88E-35 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 ProSitePatterns PS01008 DnaA protein signature. 447 466 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 Pfam PF00308 Bacterial dnaA protein 153 371 7.9E-68 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 Pfam PF11638 DnaA N-terminal domain 33 94 4.5E-14 T 11-10-2018 IPR024633 DnaA N-terminal domain AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 Gene3D G3DSA:3.30.300.180 31 122 5.6E-10 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 SUPERFAMILY SSF52540 153 365 4.96E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 284 311 5.4E-38 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 186 206 5.4E-38 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 250 264 5.4E-38 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 218 232 5.4E-38 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 447 466 5.4E-38 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 33 487 9.4E-145 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 398 465 1.3E-28 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMC99_00238 a4a3d5fce4e05dc1e9742c79522e7e95 489 SMART SM00760 397 466 1.6E-36 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMC99_01340 dd88f2a1818ee66c4d241dae10d5d5b1 162 SUPERFAMILY SSF48452 31 130 7.38E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01340 dd88f2a1818ee66c4d241dae10d5d5b1 162 SMART SM00028 32 65 0.0056 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_01340 dd88f2a1818ee66c4d241dae10d5d5b1 162 SMART SM00028 66 99 9.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_01340 dd88f2a1818ee66c4d241dae10d5d5b1 162 Gene3D G3DSA:1.25.40.10 19 146 2.9E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01340 dd88f2a1818ee66c4d241dae10d5d5b1 162 Pfam PF13432 Tetratricopeptide repeat 37 99 4.3E-9 T 11-10-2018 AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 SMART SM01002 149 297 7.0E-87 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 351 4.1E-82 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 PIRSF PIRSF000183 1 360 2.9E-147 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 SUPERFAMILY SSF51735 137 303 7.31E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 SUPERFAMILY SSF52283 1 359 2.21E-64 T 11-10-2018 AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 5.1E-43 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 359 6.6E-149 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 SMART SM01003 4 137 4.3E-74 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 Gene3D G3DSA:3.40.50.720 130 305 6.2E-135 T 11-10-2018 AMC99_00801 fdb6d64de69b88bf5cdc56ab216f8de2 360 Gene3D G3DSA:3.40.50.720 3 352 6.2E-135 T 11-10-2018 AMC99_00431 846ea7c6f3e10927611656364820b355 209 PIRSF PIRSF000495 3 209 7.1E-66 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMC99_00431 846ea7c6f3e10927611656364820b355 209 Pfam PF00117 Glutamine amidotransferase class-I 7 204 3.2E-20 T 11-10-2018 IPR017926 Glutamine amidotransferase AMC99_00431 846ea7c6f3e10927611656364820b355 209 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 207 33.24 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMC99_00431 846ea7c6f3e10927611656364820b355 209 Gene3D G3DSA:3.40.50.880 2 208 2.2E-63 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_00431 846ea7c6f3e10927611656364820b355 209 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 207 2.1E-61 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 AMC99_00431 846ea7c6f3e10927611656364820b355 209 SUPERFAMILY SSF52317 6 198 5.3E-47 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01145 73d4aa5797a438d771e14bc76385540f 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 126 299 9.7E-64 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMC99_01145 73d4aa5797a438d771e14bc76385540f 318 SUPERFAMILY SSF52440 3 124 1.41E-39 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMC99_01145 73d4aa5797a438d771e14bc76385540f 318 Gene3D G3DSA:3.30.1490.20 139 203 7.3E-105 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMC99_01145 73d4aa5797a438d771e14bc76385540f 318 Gene3D G3DSA:3.40.50.20 9 116 7.3E-105 T 11-10-2018 AMC99_01145 73d4aa5797a438d771e14bc76385540f 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 318 145.718 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMC99_01145 73d4aa5797a438d771e14bc76385540f 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 122 6.5E-41 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMC99_01145 73d4aa5797a438d771e14bc76385540f 318 SUPERFAMILY SSF56059 126 314 4.38E-56 T 11-10-2018 AMC99_01145 73d4aa5797a438d771e14bc76385540f 318 Gene3D G3DSA:3.30.470.20 117 297 7.3E-105 T 11-10-2018 AMC99_01145 73d4aa5797a438d771e14bc76385540f 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 313 4.5E-115 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 SUPERFAMILY SSF52540 391 1343 1.23E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 Gene3D G3DSA:3.40.50.300 1184 1369 7.8E-23 T 11-10-2018 AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 Pfam PF13604 AAA domain 393 456 7.3E-7 T 11-10-2018 AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 Gene3D G3DSA:3.40.960.10 1382 1483 5.4E-18 T 11-10-2018 AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 SUPERFAMILY SSF52980 1379 1483 5.18E-13 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 Pfam PF04480 Protein of unknown function (DUF559) 1384 1478 1.5E-6 T 11-10-2018 IPR007569 Protein of unknown function DUF559 AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 Pfam PF11784 Protein of unknown function (DUF3320) 1686 1735 7.0E-11 T 11-10-2018 IPR021754 Protein of unknown function DUF3320 AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 Gene3D G3DSA:3.40.50.300 324 538 1.6E-18 T 11-10-2018 AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 Gene3D G3DSA:3.40.50.300 920 1150 5.4E-9 T 11-10-2018 AMC99_02161 4d3f7fdb8be0f1e77087d508c046646f 1840 Pfam PF13087 AAA domain 1177 1343 5.3E-13 T 11-10-2018 AMC99_01604 9888b669d2e9b4f50856bd840d36975b 202 Gene3D G3DSA:3.40.109.10 2 199 7.0E-31 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMC99_01604 9888b669d2e9b4f50856bd840d36975b 202 Pfam PF00881 Nitroreductase family 21 180 6.7E-15 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMC99_01604 9888b669d2e9b4f50856bd840d36975b 202 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 3 202 41.54 T 11-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 AMC99_01604 9888b669d2e9b4f50856bd840d36975b 202 SUPERFAMILY SSF55469 17 193 3.8E-44 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 248 260 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 Gene3D G3DSA:3.20.20.70 1 331 2.3E-135 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 SMART SM01004 5 329 7.5E-221 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 PIRSF PIRSF001415 1 331 2.1E-138 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 SUPERFAMILY SSF51569 4 330 4.54E-134 T 11-10-2018 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 126 140 5.2E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 157 176 5.2E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 195 214 5.2E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 322 5.2E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 273 288 5.2E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 248 264 5.2E-56 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_02570 1c983a90b9b4af131e638972b27ca924 331 Pfam PF00490 Delta-aminolevulinic acid dehydratase 9 327 9.3E-132 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 Gene3D G3DSA:1.10.10.10 132 198 2.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 2.3E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 2.3E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 2.3E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 SUPERFAMILY SSF52172 18 160 4.07E-11 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 194 3.1E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 SUPERFAMILY SSF46894 128 198 1.09E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 SMART SM00421 138 195 2.6E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00829 86ffb21c39cbc239d1f6e6c64f049425 205 Gene3D G3DSA:3.40.50.2300 9 124 6.3E-6 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 Pfam PF01751 Toprim domain 455 565 7.8E-17 T 11-10-2018 IPR006171 TOPRIM domain AMC99_02309 20612c9597451120adab5883e9ab58c5 850 Gene3D G3DSA:3.40.50.670 756 848 7.3E-25 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 25 850 6.1E-286 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 Gene3D G3DSA:3.30.230.10 257 434 7.3E-71 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_02309 20612c9597451120adab5883e9ab58c5 850 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 22 850 95.991 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 Pfam PF00204 DNA gyrase B 258 427 2.8E-58 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 SMART SM00433 55 843 6.6E-243 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 SUPERFAMILY SSF55874 25 247 7.26E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 803 815 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 231 244 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 397 411 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 819 835 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 349 365 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 25 35 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 506 515 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 257 279 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 216 231 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR01159 DNA gyrase subunit B signature 411 431 3.9E-68 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 SMART SM00387 51 210 2.3E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR00418 DNA topoisomerase II family signature 55 70 1.2E-70 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR00418 DNA topoisomerase II family signature 560 572 1.2E-70 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR00418 DNA topoisomerase II family signature 305 318 1.2E-70 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR00418 DNA topoisomerase II family signature 782 798 1.2E-70 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR00418 DNA topoisomerase II family signature 137 151 1.2E-70 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR00418 DNA topoisomerase II family signature 522 538 1.2E-70 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR00418 DNA topoisomerase II family signature 456 470 1.2E-70 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR00418 DNA topoisomerase II family signature 540 557 1.2E-70 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 PRINTS PR00418 DNA topoisomerase II family signature 90 103 1.2E-70 T 11-10-2018 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 52 207 1.4E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02309 20612c9597451120adab5883e9ab58c5 850 SUPERFAMILY SSF56719 430 842 1.12E-83 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 SUPERFAMILY SSF54211 258 428 1.23E-57 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_02309 20612c9597451120adab5883e9ab58c5 850 Gene3D G3DSA:3.40.50.670 435 603 3.4E-72 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 ProSitePatterns PS00177 DNA topoisomerase II signature. 458 466 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_02309 20612c9597451120adab5883e9ab58c5 850 Gene3D G3DSA:3.30.565.10 23 256 2.1E-84 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02309 20612c9597451120adab5883e9ab58c5 850 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 778 839 1.8E-29 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_00160 0cd41c4d727557d3a031e33ef7bb8730 189 SUPERFAMILY SSF52218 3 176 1.31E-26 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMC99_00160 0cd41c4d727557d3a031e33ef7bb8730 189 Pfam PF03358 NADPH-dependent FMN reductase 3 142 3.2E-21 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMC99_00160 0cd41c4d727557d3a031e33ef7bb8730 189 Gene3D G3DSA:3.40.50.360 1 188 7.8E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMC99_02658 36cce86adf286a1baae2872475a4592b 106 Gene3D G3DSA:3.40.630.30 13 105 4.1E-19 T 11-10-2018 AMC99_02658 36cce86adf286a1baae2872475a4592b 106 Pfam PF14542 GCN5-related N-acetyl-transferase 21 103 3.1E-20 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AMC99_02658 36cce86adf286a1baae2872475a4592b 106 SUPERFAMILY SSF55729 10 103 8.48E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 Pfam PF00203 Ribosomal protein S19 3 83 5.5E-37 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.79 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 SUPERFAMILY SSF54570 3 84 3.92E-34 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 PIRSF PIRSF002144 1 91 1.9E-34 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 Gene3D G3DSA:3.30.860.10 1 91 1.5E-40 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 8.9E-43 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01542 9a91d8d96c0b4a64acdbfabc4ea43cb6 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-22 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01959 25a0c481a6963c1236d4aba5b14b19a6 493 Gene3D G3DSA:3.90.1300.10 4 491 1.4E-180 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_01959 25a0c481a6963c1236d4aba5b14b19a6 493 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 20 482 3.3E-165 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_01959 25a0c481a6963c1236d4aba5b14b19a6 493 ProSitePatterns PS00571 Amidases signature. 157 188 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AMC99_01959 25a0c481a6963c1236d4aba5b14b19a6 493 SUPERFAMILY SSF75304 3 489 5.1E-152 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_01959 25a0c481a6963c1236d4aba5b14b19a6 493 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 484 88.298 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_01959 25a0c481a6963c1236d4aba5b14b19a6 493 Pfam PF01425 Amidase 26 473 8.2E-147 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_00628 bd3ca294aac11f830abbd1f6823da553 182 Pfam PF01292 Prokaryotic cytochrome b561 8 179 7.7E-23 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMC99_00628 bd3ca294aac11f830abbd1f6823da553 182 SUPERFAMILY SSF81342 4 180 1.33E-32 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMC99_02376 d029fa272f8802ac42f3bd29c7c9ec14 409 Gene3D G3DSA:3.40.50.2000 1 203 2.1E-31 T 11-10-2018 AMC99_02376 d029fa272f8802ac42f3bd29c7c9ec14 409 TIGRFAM TIGR04063 stp3: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family 2 397 5.1E-182 T 11-10-2018 IPR024004 Glycosyltransferase family 1, Daro2409 family AMC99_02376 d029fa272f8802ac42f3bd29c7c9ec14 409 Pfam PF13692 Glycosyl transferases group 1 215 360 3.0E-27 T 11-10-2018 AMC99_02376 d029fa272f8802ac42f3bd29c7c9ec14 409 Pfam PF13579 Glycosyl transferase 4-like domain 15 188 4.6E-27 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMC99_02376 d029fa272f8802ac42f3bd29c7c9ec14 409 SUPERFAMILY SSF53756 2 399 5.89E-73 T 11-10-2018 AMC99_02376 d029fa272f8802ac42f3bd29c7c9ec14 409 Gene3D G3DSA:3.40.50.2000 204 378 3.6E-38 T 11-10-2018 AMC99_01768 71ae1db3e96e30db3b020d4ad9e916a3 111 PRINTS PR00355 Adrenodoxin signature 82 90 3.3E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMC99_01768 71ae1db3e96e30db3b020d4ad9e916a3 111 PRINTS PR00355 Adrenodoxin signature 40 50 3.3E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMC99_01768 71ae1db3e96e30db3b020d4ad9e916a3 111 PRINTS PR00355 Adrenodoxin signature 59 73 3.3E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMC99_01768 71ae1db3e96e30db3b020d4ad9e916a3 111 Gene3D G3DSA:3.10.20.30 1 111 1.1E-39 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_01768 71ae1db3e96e30db3b020d4ad9e916a3 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMC99_01768 71ae1db3e96e30db3b020d4ad9e916a3 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 89 1.4E-10 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_01768 71ae1db3e96e30db3b020d4ad9e916a3 111 SUPERFAMILY SSF54292 4 102 1.67E-27 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 SMART SM00421 140 197 8.0E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 SMART SM00448 3 116 3.3E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 Gene3D G3DSA:1.10.10.10 127 200 3.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 Pfam PF00072 Response regulator receiver domain 5 116 4.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 SUPERFAMILY SSF46894 138 199 1.4E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 Gene3D G3DSA:3.40.50.2300 2 126 2.3E-25 T 11-10-2018 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 3.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 3.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 3.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 SUPERFAMILY SSF52172 4 156 1.37E-24 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_00512 ff8b2e7c836f04757c5cc735486d8a6c 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 2.0E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_01562 e5b6d6628b6e6275e3be6c513030ba25 303 Pfam PF08666 SAF domain 45 107 1.1E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMC99_01562 e5b6d6628b6e6275e3be6c513030ba25 303 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 294 3.7E-64 T 11-10-2018 IPR017592 Pilus assembly, Flp-type CpaB AMC99_01562 e5b6d6628b6e6275e3be6c513030ba25 303 SMART SM00858 44 108 1.2E-12 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMC99_01562 e5b6d6628b6e6275e3be6c513030ba25 303 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 115 222 5.2E-27 T 11-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AMC99_01629 8df64486c09ab730d91a87e4a250cce9 253 Pfam PF13462 Thioredoxin 59 241 6.5E-23 T 11-10-2018 IPR012336 Thioredoxin-like fold AMC99_01629 8df64486c09ab730d91a87e4a250cce9 253 SUPERFAMILY SSF52833 52 232 1.53E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01629 8df64486c09ab730d91a87e4a250cce9 253 Gene3D G3DSA:3.40.30.10 58 243 1.1E-51 T 11-10-2018 AMC99_01629 8df64486c09ab730d91a87e4a250cce9 253 Gene3D G3DSA:3.30.750.110 115 216 1.1E-51 T 11-10-2018 AMC99_00444 8c3939e87b1d81be9f282ec9f0103160 179 SMART SM00271 115 173 2.5E-16 T 11-10-2018 IPR001623 DnaJ domain AMC99_00444 8c3939e87b1d81be9f282ec9f0103160 179 Gene3D G3DSA:1.10.287.110 106 178 6.0E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_00444 8c3939e87b1d81be9f282ec9f0103160 179 SUPERFAMILY SSF46565 82 176 7.98E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_00444 8c3939e87b1d81be9f282ec9f0103160 179 PRINTS PR00625 DnaJ domain signature 153 173 5.5E-7 T 11-10-2018 IPR001623 DnaJ domain AMC99_00444 8c3939e87b1d81be9f282ec9f0103160 179 PRINTS PR00625 DnaJ domain signature 136 151 5.5E-7 T 11-10-2018 IPR001623 DnaJ domain AMC99_00444 8c3939e87b1d81be9f282ec9f0103160 179 PRINTS PR00625 DnaJ domain signature 118 136 5.5E-7 T 11-10-2018 IPR001623 DnaJ domain AMC99_00444 8c3939e87b1d81be9f282ec9f0103160 179 Pfam PF00226 DnaJ domain 119 176 3.1E-15 T 11-10-2018 IPR001623 DnaJ domain AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 228 276 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 136 156 2.5E-47 T 11-10-2018 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 247 264 2.5E-47 T 11-10-2018 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 159 178 2.5E-47 T 11-10-2018 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 124 136 2.5E-47 T 11-10-2018 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 265 282 2.5E-47 T 11-10-2018 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 227 247 2.5E-47 T 11-10-2018 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 PRINTS PR01166 Cytochrome c oxidase subunit II signature 203 224 2.5E-47 T 11-10-2018 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 163 282 8.6E-46 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 SUPERFAMILY SSF81464 58 156 5.56E-25 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 86 292 1.6E-58 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 Gene3D G3DSA:2.60.40.420 160 295 2.9E-50 T 11-10-2018 IPR008972 Cupredoxin AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 SUPERFAMILY SSF49503 159 293 3.5E-50 T 11-10-2018 IPR008972 Cupredoxin AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 Gene3D G3DSA:1.10.287.90 63 158 1.1E-29 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00564 3fbd125892ae5af2c40e4177c29097f2 333 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 63 150 2.6E-19 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00287 3376933580002741b6dde0ac17d8cfd0 156 Gene3D G3DSA:3.40.630.30 6 156 5.8E-42 T 11-10-2018 AMC99_00287 3376933580002741b6dde0ac17d8cfd0 156 SUPERFAMILY SSF55729 4 154 9.12E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_00287 3376933580002741b6dde0ac17d8cfd0 156 Pfam PF00583 Acetyltransferase (GNAT) family 30 133 5.2E-13 T 11-10-2018 IPR000182 GNAT domain AMC99_01465 119b5dacdb501196652dea2f8593151c 888 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 704 1.5E-15 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 Gene3D G3DSA:3.10.310.40 774 885 2.3E-26 T 11-10-2018 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 Pfam PF01411 tRNA synthetases class II (A) 6 556 8.0E-213 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 866 7.0E-282 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 SMART SM00863 654 704 5.0E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 Pfam PF02272 DHHA1 domain 741 883 1.5E-19 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 SUPERFAMILY SSF55681 3 245 1.24E-105 T 11-10-2018 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 Gene3D G3DSA:3.30.54.20 625 685 3.4E-47 T 11-10-2018 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 SUPERFAMILY SSF50447 453 553 8.49E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_01465 119b5dacdb501196652dea2f8593151c 888 Gene3D G3DSA:3.30.930.10 1 242 8.2E-106 T 11-10-2018 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 Gene3D G3DSA:3.30.980.10 564 705 3.4E-47 T 11-10-2018 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 1.9E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 1.9E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 1.9E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 1.9E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 1.9E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 SUPERFAMILY SSF55186 553 715 7.72E-49 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 Gene3D G3DSA:2.40.30.130 476 553 1.6E-7 T 11-10-2018 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 888 194.762 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AMC99_01465 119b5dacdb501196652dea2f8593151c 888 SUPERFAMILY SSF101353 246 460 5.36E-60 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AMC99_01437 57139022505b1b062c6aedc148017925 436 Gene3D G3DSA:1.20.200.10 97 352 1.6E-89 T 11-10-2018 AMC99_01437 57139022505b1b062c6aedc148017925 436 Pfam PF00206 Lyase 73 288 1.2E-49 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AMC99_01437 57139022505b1b062c6aedc148017925 436 Gene3D G3DSA:1.10.40.30 353 434 8.1E-29 T 11-10-2018 AMC99_01437 57139022505b1b062c6aedc148017925 436 ProSitePatterns PS00163 Fumarate lyases signature. 265 274 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AMC99_01437 57139022505b1b062c6aedc148017925 436 SMART SM00998 353 435 2.1E-37 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_01437 57139022505b1b062c6aedc148017925 436 SUPERFAMILY SSF48557 3 435 9.9E-126 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AMC99_01437 57139022505b1b062c6aedc148017925 436 PRINTS PR00149 Fumarate lyase superfamily signature 92 110 2.3E-24 T 11-10-2018 IPR000362 Fumarate lyase family AMC99_01437 57139022505b1b062c6aedc148017925 436 PRINTS PR00149 Fumarate lyase superfamily signature 265 281 2.3E-24 T 11-10-2018 IPR000362 Fumarate lyase family AMC99_01437 57139022505b1b062c6aedc148017925 436 PRINTS PR00149 Fumarate lyase superfamily signature 220 247 2.3E-24 T 11-10-2018 IPR000362 Fumarate lyase family AMC99_01437 57139022505b1b062c6aedc148017925 436 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 2.3E-24 T 11-10-2018 IPR000362 Fumarate lyase family AMC99_01437 57139022505b1b062c6aedc148017925 436 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 435 8.8E-149 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_01437 57139022505b1b062c6aedc148017925 436 Gene3D G3DSA:1.10.275.10 1 96 3.5E-25 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AMC99_01437 57139022505b1b062c6aedc148017925 436 Pfam PF10397 Adenylosuccinate lyase C-terminus 354 434 3.4E-27 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AMC99_01437 57139022505b1b062c6aedc148017925 436 PRINTS PR00145 Argininosuccinate lyase family signature 220 244 8.8E-8 T 11-10-2018 AMC99_01437 57139022505b1b062c6aedc148017925 436 PRINTS PR00145 Argininosuccinate lyase family signature 91 113 8.8E-8 T 11-10-2018 AMC99_01437 57139022505b1b062c6aedc148017925 436 PRINTS PR00145 Argininosuccinate lyase family signature 265 281 8.8E-8 T 11-10-2018 AMC99_01437 57139022505b1b062c6aedc148017925 436 PRINTS PR00145 Argininosuccinate lyase family signature 132 152 8.8E-8 T 11-10-2018 AMC99_00412 a89fce5041f10641d4e90a537cb511f1 195 SUPERFAMILY SSF49777 34 174 1.44E-23 T 11-10-2018 IPR036610 PEBP-like superfamily AMC99_00412 a89fce5041f10641d4e90a537cb511f1 195 Pfam PF01161 Phosphatidylethanolamine-binding protein 54 180 2.4E-20 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein AMC99_00412 a89fce5041f10641d4e90a537cb511f1 195 Gene3D G3DSA:3.90.280.10 35 183 5.1E-35 T 11-10-2018 IPR036610 PEBP-like superfamily AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 Pfam PF01011 PQQ enzyme repeat 294 323 6.4E-6 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 Pfam PF01011 PQQ enzyme repeat 505 541 2.1E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 SUPERFAMILY SSF50998 38 617 2.09E-166 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 614 688 3.1E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 Gene3D G3DSA:1.10.760.10 600 700 8.6E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 SUPERFAMILY SSF46626 603 694 1.17E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 140 171 0.0018 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 184 222 0.0091 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 499 531 0.21 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 262 313 0.56 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 SMART SM00564 88 120 1.6E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 Gene3D G3DSA:2.140.10.10 33 597 6.1E-212 T 11-10-2018 AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 Pfam PF13360 PQQ-like domain 86 220 3.2E-16 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMC99_00019 c6527c45953ac95fe4a0de8ebd428c75 701 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 39 559 1.0E-188 T 11-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 Pfam PF07690 Major Facilitator Superfamily 11 356 1.8E-50 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 16 32 7.3E-59 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 252 272 7.3E-59 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 305 325 7.3E-59 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 105 126 7.3E-59 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 280 301 7.3E-59 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 78 102 7.3E-59 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 163 183 7.3E-59 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 340 363 7.3E-59 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 PRINTS PR01035 Tetracycline resistance protein signature 135 157 7.3E-59 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 Gene3D G3DSA:1.20.1250.20 1 398 4.0E-74 T 11-10-2018 AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 SUPERFAMILY SSF103473 7 400 2.49E-64 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_02304 91fe00cd8e9d0d710f08989de0c0715f 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMC99_01355 188cd94110db0c2e798d0ed4866d074b 108 PIRSF PIRSF000178 1 106 1.6E-17 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01355 188cd94110db0c2e798d0ed4866d074b 108 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 100 9.9E-17 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01355 188cd94110db0c2e798d0ed4866d074b 108 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 1 103 1.3E-22 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01355 188cd94110db0c2e798d0ed4866d074b 108 Gene3D G3DSA:1.20.1300.10 1 106 3.6E-27 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01355 188cd94110db0c2e798d0ed4866d074b 108 SUPERFAMILY SSF81343 1 106 1.11E-18 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.0E-21 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 1.0E-21 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 136 159 1.0E-21 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.0E-21 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.0E-21 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 Gene3D G3DSA:3.40.190.80 157 266 1.3E-11 T 11-10-2018 AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 Gene3D G3DSA:3.30.540.10 5 156 2.0E-32 T 11-10-2018 AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 Pfam PF00459 Inositol monophosphatase family 17 251 6.4E-38 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00954 5e3fbb83229cf7d6e445d7d2d6a19315 268 SUPERFAMILY SSF56655 13 262 7.59E-53 T 11-10-2018 AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 16 686 9.3E-143 T 11-10-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 SUPERFAMILY SSF55874 563 687 2.62E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 Gene3D G3DSA:1.10.287.130 487 543 3.4E-32 T 11-10-2018 AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 SMART SM00387 582 689 7.8E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 SUPERFAMILY SSF55781 331 464 1.52E-8 T 11-10-2018 AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 Gene3D G3DSA:3.30.450.40 312 475 2.8E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 583 688 7.8E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 Gene3D G3DSA:3.30.565.10 544 686 3.4E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 667 8.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 673 686 8.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 8.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01005 db62dbe7a1da6f6615ee1edf5680f123 705 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 8.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 Gene3D G3DSA:3.30.559.10 184 429 1.4E-91 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 Pfam PF00364 Biotin-requiring enzyme 4 77 3.4E-22 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 432 1.0E-157 T 11-10-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 Pfam PF02817 e3 binding domain 135 170 1.3E-16 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 Gene3D G3DSA:4.10.320.10 123 176 1.6E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 206 431 5.1E-79 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 SUPERFAMILY SSF51230 1 96 4.71E-30 T 11-10-2018 IPR011053 Single hybrid motif AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 SUPERFAMILY SSF52777 205 431 3.65E-79 T 11-10-2018 AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 Gene3D G3DSA:2.40.50.100 2 103 8.7E-34 T 11-10-2018 AMC99_01171 1521eaded07335fd1b6889ef8f25e7fd 432 SUPERFAMILY SSF47005 129 172 4.84E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 SUPERFAMILY SSF81935 16 184 1.44E-62 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 Pfam PF01619 Proline dehydrogenase 192 489 1.3E-97 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 Pfam PF00171 Aldehyde dehydrogenase family 576 1017 4.7E-107 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 SUPERFAMILY SSF51730 185 533 7.85E-118 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AMC99_02259 f6a00054801bd1da107ecef933144730 1215 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 823 834 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 Gene3D G3DSA:3.40.605.10 550 1019 2.9E-142 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 Gene3D G3DSA:3.20.20.220 15 109 2.3E-13 T 11-10-2018 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 Gene3D G3DSA:3.20.20.220 135 526 2.4E-143 T 11-10-2018 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 PIRSF PIRSF000197 1 1215 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 SUPERFAMILY SSF53720 552 1019 2.88E-121 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 71 182 2.5E-45 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 528 1019 5.0E-218 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AMC99_02259 f6a00054801bd1da107ecef933144730 1215 Gene3D G3DSA:3.40.309.10 798 990 2.9E-142 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 Gene3D G3DSA:3.50.50.60 327 450 2.4E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 SUPERFAMILY SSF52833 105 196 1.07E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 214 505 4.6E-48 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 SUPERFAMILY SSF52833 1 102 3.02E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 518 1.8E-221 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 SUPERFAMILY SSF51905 205 515 2.59E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 Gene3D G3DSA:3.40.30.80 1 200 1.8E-59 T 11-10-2018 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PIRSF PIRSF000238 1 522 9.5E-236 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 6.8E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 6.8E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 479 497 6.8E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 6.8E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 6.8E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 6.8E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 6.8E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 6.8E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 6.8E-61 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 Pfam PF13192 Thioredoxin domain 123 191 7.7E-11 T 11-10-2018 IPR012336 Thioredoxin-like fold AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 Gene3D G3DSA:3.50.50.60 214 509 2.4E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.9E-40 T 11-10-2018 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 6.9E-40 T 11-10-2018 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 469 491 6.9E-40 T 11-10-2018 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 6.9E-40 T 11-10-2018 AMC99_00261 64ba773041b7c9cc545b5c16cebefd14 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 6.9E-40 T 11-10-2018 AMC99_02555 536465db70706446c0b49b53978ac628 209 Pfam PF14352 Domain of unknown function (DUF4402) 43 208 5.0E-13 T 11-10-2018 IPR025514 Protein of unknown function DUF4402 AMC99_00107 ab10b4cd3c9d784ba9f500446f35b5e9 371 SUPERFAMILY SSF81901 235 366 2.09E-18 T 11-10-2018 AMC99_00107 ab10b4cd3c9d784ba9f500446f35b5e9 371 SMART SM00671 179 214 4.6 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00107 ab10b4cd3c9d784ba9f500446f35b5e9 371 SMART SM00671 288 323 0.75 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00107 ab10b4cd3c9d784ba9f500446f35b5e9 371 SMART SM00671 252 287 0.05 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00107 ab10b4cd3c9d784ba9f500446f35b5e9 371 SMART SM00671 324 359 0.021 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00107 ab10b4cd3c9d784ba9f500446f35b5e9 371 SMART SM00671 143 178 0.22 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00107 ab10b4cd3c9d784ba9f500446f35b5e9 371 SMART SM00671 215 251 6.1 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00107 ab10b4cd3c9d784ba9f500446f35b5e9 371 Gene3D G3DSA:1.25.40.10 111 370 2.4E-44 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00107 ab10b4cd3c9d784ba9f500446f35b5e9 371 SUPERFAMILY SSF81901 116 247 5.49E-18 T 11-10-2018 AMC99_00218 c638a49b3068e482afc413a669483a2f 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.53 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00218 c638a49b3068e482afc413a669483a2f 44 Pfam PF00468 Ribosomal protein L34 1 44 4.2E-21 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00218 c638a49b3068e482afc413a669483a2f 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00218 c638a49b3068e482afc413a669483a2f 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 2.1E-19 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00218 c638a49b3068e482afc413a669483a2f 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 24 2.0E-6 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 Gene3D G3DSA:3.60.20.10 24 459 2.0E-179 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 Pfam PF01493 GXGXG motif 1277 1461 2.2E-81 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 SUPERFAMILY SSF51395 469 1231 5.29E-264 T 11-10-2018 AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 Gene3D G3DSA:3.20.20.70 814 1246 1.4E-199 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 SUPERFAMILY SSF69336 1246 1538 3.14E-91 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 Gene3D G3DSA:2.160.20.60 1250 1549 6.2E-110 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 Pfam PF04898 Glutamate synthase central domain 480 765 2.3E-112 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 Gene3D G3DSA:3.20.20.70 460 813 3.4E-135 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 Pfam PF01645 Conserved region in glutamate synthase 830 1197 3.6E-154 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 Pfam PF00310 Glutamine amidotransferases class-II 24 450 2.1E-179 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AMC99_02378 fe9652971c78e54bc7165a0674cb7b5c 1552 SUPERFAMILY SSF56235 24 453 6.56E-153 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_02349 221dac4b037ce30044fd24a4f8f0d000 265 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 263 5.8E-51 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMC99_02349 221dac4b037ce30044fd24a4f8f0d000 265 Gene3D G3DSA:3.60.10.10 1 264 7.1E-58 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMC99_02349 221dac4b037ce30044fd24a4f8f0d000 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 256 6.2E-18 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_02349 221dac4b037ce30044fd24a4f8f0d000 265 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 AMC99_02349 221dac4b037ce30044fd24a4f8f0d000 265 SUPERFAMILY SSF56219 3 265 9.81E-68 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 Gene3D G3DSA:3.50.50.60 113 227 1.6E-71 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 SUPERFAMILY SSF51905 129 226 2.33E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 Gene3D G3DSA:3.50.50.60 3 289 1.6E-71 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.2E-22 T 11-10-2018 AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 2.2E-22 T 11-10-2018 AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 270 2.2E-22 T 11-10-2018 AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.2E-22 T 11-10-2018 AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 283 2.7E-29 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 SUPERFAMILY SSF51905 3 295 1.51E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 1.1E-25 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 55 65 1.1E-25 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 1.1E-25 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 100 108 1.1E-25 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_01412 9d98371761ef74991bb28ed3eb6c5eb6 302 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 1.1E-25 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00138 645d21655367766a384f2dad6e777236 298 SUPERFAMILY SSF63882 1 71 6.02E-15 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00138 645d21655367766a384f2dad6e777236 298 Pfam PF03453 MoeA N-terminal region (domain I and II) 1 64 2.3E-10 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00138 645d21655367766a384f2dad6e777236 298 Gene3D G3DSA:2.170.190.11 1 39 1.1E-75 T 11-10-2018 AMC99_00138 645d21655367766a384f2dad6e777236 298 Pfam PF00994 Probable molybdopterin binding domain 78 212 9.1E-16 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_00138 645d21655367766a384f2dad6e777236 298 Gene3D G3DSA:3.40.980.10 73 227 1.1E-75 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_00138 645d21655367766a384f2dad6e777236 298 Pfam PF03454 MoeA C-terminal region (domain IV) 232 297 2.0E-9 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00138 645d21655367766a384f2dad6e777236 298 Gene3D G3DSA:2.40.340.10 228 293 1.1E-75 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00138 645d21655367766a384f2dad6e777236 298 SUPERFAMILY SSF53218 75 220 4.32E-31 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_00138 645d21655367766a384f2dad6e777236 298 Gene3D G3DSA:3.90.105.10 40 72 1.1E-75 T 11-10-2018 AMC99_00138 645d21655367766a384f2dad6e777236 298 SMART SM00852 78 217 1.6E-24 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_00138 645d21655367766a384f2dad6e777236 298 SUPERFAMILY SSF63867 230 296 9.29E-12 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01912 a3533b8d86a8e39ad1e0019e2384a55c 269 Pfam PF02616 Segregation and condensation protein ScpA 50 265 1.8E-15 T 11-10-2018 IPR003768 Segregation and condensation protein A AMC99_01061 3c314116dc1c7cf5f0980ee37db32f50 315 SUPERFAMILY SSF52540 3 228 1.46E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01061 3c314116dc1c7cf5f0980ee37db32f50 315 Pfam PF00005 ABC transporter 22 164 1.1E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_01061 3c314116dc1c7cf5f0980ee37db32f50 315 Gene3D G3DSA:3.40.50.300 1 235 3.6E-64 T 11-10-2018 AMC99_01061 3c314116dc1c7cf5f0980ee37db32f50 315 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_01061 3c314116dc1c7cf5f0980ee37db32f50 315 SMART SM00382 31 212 3.7E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01993 6c39e38a7252c5f5f1b898f300a4f497 222 SUPERFAMILY SSF53955 43 210 1.38E-51 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMC99_01993 6c39e38a7252c5f5f1b898f300a4f497 222 Pfam PF00912 Transglycosylase 44 193 9.7E-45 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01993 6c39e38a7252c5f5f1b898f300a4f497 222 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 6 213 5.4E-72 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01993 6c39e38a7252c5f5f1b898f300a4f497 222 Gene3D G3DSA:1.10.3810.10 34 217 2.2E-46 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01993 6c39e38a7252c5f5f1b898f300a4f497 222 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 215 36.753 T 11-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 SUPERFAMILY SSF53671 1 305 2.75E-102 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 302 7.6E-49 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 147 1.3E-47 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 304 2.7E-113 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 2.7E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 2.7E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 2.7E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 2.7E-25 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 2.6E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 222 232 2.6E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 2.6E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 283 294 2.6E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 2.6E-31 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 Gene3D G3DSA:3.40.50.1370 13 300 3.5E-109 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 305 75.894 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_02718 773ef5e67201092a55eb894baeadcb14 308 Gene3D G3DSA:3.40.50.1370 137 291 3.5E-109 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMC99_01535 ea6fb445c0ecc8889f3aa44edd4fd247 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 99 18.832 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01535 ea6fb445c0ecc8889f3aa44edd4fd247 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 104 1.4E-21 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01535 ea6fb445c0ecc8889f3aa44edd4fd247 106 SMART SM00739 5 32 8.6E-7 T 11-10-2018 IPR005824 KOW AMC99_01535 ea6fb445c0ecc8889f3aa44edd4fd247 106 Pfam PF00467 KOW motif 8 39 2.8E-8 T 11-10-2018 IPR005824 KOW AMC99_01535 ea6fb445c0ecc8889f3aa44edd4fd247 106 Gene3D G3DSA:2.30.30.30 1 103 5.6E-37 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMC99_01535 ea6fb445c0ecc8889f3aa44edd4fd247 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01535 ea6fb445c0ecc8889f3aa44edd4fd247 106 SUPERFAMILY SSF50104 3 102 4.89E-34 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMC99_01535 ea6fb445c0ecc8889f3aa44edd4fd247 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 104 2.2E-33 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02423 6ba5e50a90a787cf5654f26817335f5e 334 SUPERFAMILY SSF52540 26 243 8.2E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02423 6ba5e50a90a787cf5654f26817335f5e 334 SMART SM00382 51 233 1.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02423 6ba5e50a90a787cf5654f26817335f5e 334 Gene3D G3DSA:3.40.50.300 16 253 2.4E-56 T 11-10-2018 AMC99_02423 6ba5e50a90a787cf5654f26817335f5e 334 Pfam PF00005 ABC transporter 43 182 7.2E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_02172 0bebe193174cdfe73a2a756699fd21e7 191 Gene3D G3DSA:3.10.180.10 9 178 2.8E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_02172 0bebe193174cdfe73a2a756699fd21e7 191 SUPERFAMILY SSF54593 9 145 1.61E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_02172 0bebe193174cdfe73a2a756699fd21e7 191 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 142 8.0E-18 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_02172 0bebe193174cdfe73a2a756699fd21e7 191 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 122 141 - T 11-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 AMC99_02470 ec8fbae9599247f909f0c072dc347630 327 SUPERFAMILY SSF50156 86 150 5.05E-5 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMC99_02600 2c517db69b5c6c4a2348b7210365ab50 284 Pfam PF04321 RmlD substrate binding domain 2 282 8.1E-105 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMC99_02600 2c517db69b5c6c4a2348b7210365ab50 284 Gene3D G3DSA:3.40.50.720 4 269 8.9E-101 T 11-10-2018 AMC99_02600 2c517db69b5c6c4a2348b7210365ab50 284 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 281 1.4E-95 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 AMC99_02600 2c517db69b5c6c4a2348b7210365ab50 284 SUPERFAMILY SSF51735 2 281 7.24E-94 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02600 2c517db69b5c6c4a2348b7210365ab50 284 Gene3D G3DSA:3.90.25.10 158 276 8.9E-101 T 11-10-2018 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 20 1377 12.397 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF00562 RNA polymerase Rpb2, domain 6 731 1299 6.6E-164 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04565 RNA polymerase Rpb2, domain 3 526 594 2.1E-31 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 15 1374 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1800.10 1287 1339 6.9E-11 T 11-10-2018 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1100.10 25 182 3.7E-56 T 11-10-2018 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1100.10 657 726 2.9E-21 T 11-10-2018 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF10385 RNA polymerase beta subunit external 1 domain 604 669 2.3E-24 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04560 RNA polymerase Rpb2, domain 7 1301 1375 1.2E-26 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1088 1100 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04563 RNA polymerase beta subunit 34 510 4.8E-35 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.40.50.100 727 804 7.9E-30 T 11-10-2018 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 SUPERFAMILY SSF64484 18 1376 0.0 T 11-10-2018 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1110.10 316 454 3.1E-34 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:3.90.1100.10 455 650 1.0E-70 T 11-10-2018 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.40.50.150 845 968 1.6E-45 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04561 RNA polymerase Rpb2, domain 2 182 233 8.1E-5 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Pfam PF04561 RNA polymerase Rpb2, domain 2 369 467 5.4E-18 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.40.270.10 805 844 2.2E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_02806 1940a6f4baa2947e61c50bb83808b0e9 1393 Gene3D G3DSA:2.40.270.10 1001 1277 3.9E-78 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01788 422b906b7e417db28d07182285beadc1 198 Gene3D G3DSA:1.10.8.420 2 51 1.5E-8 T 11-10-2018 AMC99_01788 422b906b7e417db28d07182285beadc1 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AMC99_01788 422b906b7e417db28d07182285beadc1 198 Gene3D G3DSA:3.40.1360.10 76 197 1.7E-42 T 11-10-2018 AMC99_01788 422b906b7e417db28d07182285beadc1 198 Pfam PF02132 RecR protein 41 77 2.1E-11 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AMC99_01788 422b906b7e417db28d07182285beadc1 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 90.99 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMC99_01788 422b906b7e417db28d07182285beadc1 198 SMART SM00493 79 164 1.5E-7 T 11-10-2018 IPR006171 TOPRIM domain AMC99_01788 422b906b7e417db28d07182285beadc1 198 SUPERFAMILY SSF111304 3 197 1.7E-67 T 11-10-2018 IPR023627 Recombination protein RecR AMC99_01788 422b906b7e417db28d07182285beadc1 198 TIGRFAM TIGR00615 recR: recombination protein RecR 3 195 5.2E-62 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMC99_01788 422b906b7e417db28d07182285beadc1 198 Pfam PF13662 Toprim domain 80 170 8.0E-24 T 11-10-2018 IPR006171 TOPRIM domain AMC99_00418 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Gene3D G3DSA:2.160.10.10 89 259 5.6E-56 T 11-10-2018 AMC99_00418 be6a9bc1727fbfb5deeedbbc9cc941ef 274 SUPERFAMILY SSF51161 4 258 1.94E-67 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMC99_00418 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 69 1.4E-23 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AMC99_00418 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Gene3D G3DSA:1.10.166.10 2 70 4.9E-26 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 AMC99_00418 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 54.098 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AMC99_00418 be6a9bc1727fbfb5deeedbbc9cc941ef 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 8 273 5.7E-123 T 11-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 AMC99_00418 be6a9bc1727fbfb5deeedbbc9cc941ef 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 212 1.6E-15 T 11-10-2018 IPR001451 Hexapeptide repeat AMC99_00300 1ecaf50733e552fa65a2ba243c715ec1 356 SMART SM00587 117 294 7.1E-4 T 11-10-2018 IPR015897 CHK kinase-like AMC99_00300 1ecaf50733e552fa65a2ba243c715ec1 356 SUPERFAMILY SSF56112 7 289 5.54E-30 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMC99_00300 1ecaf50733e552fa65a2ba243c715ec1 356 Gene3D G3DSA:3.90.1200.10 127 337 1.4E-16 T 11-10-2018 AMC99_00300 1ecaf50733e552fa65a2ba243c715ec1 356 Pfam PF01636 Phosphotransferase enzyme family 80 277 1.7E-16 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 Gene3D G3DSA:3.90.190.20 289 427 2.2E-38 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 Gene3D G3DSA:3.40.50.720 6 93 9.9E-16 T 11-10-2018 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 112 135 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 13 428 4.4E-108 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 SUPERFAMILY SSF53623 68 303 1.98E-47 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 Pfam PF02875 Mur ligase family, glutamate ligase domain 290 338 5.4E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 Pfam PF08245 Mur ligase middle domain 114 235 4.1E-23 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 430 31.146 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 Gene3D G3DSA:3.40.1190.10 94 288 4.4E-48 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 SUPERFAMILY SSF53244 288 430 1.5E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01867 d86e01260c1f00e5eabaf4017251046a 447 SUPERFAMILY SSF51984 7 94 6.28E-12 T 11-10-2018 AMC99_00220 a03a00c605331ef60036b0022fe9cdec 69 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 22.131 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMC99_00220 a03a00c605331ef60036b0022fe9cdec 69 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 69 7.7E-22 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMC99_00220 a03a00c605331ef60036b0022fe9cdec 69 Pfam PF01809 Haemolytic domain 3 68 1.1E-26 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMC99_00220 a03a00c605331ef60036b0022fe9cdec 69 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 68 2.0E-20 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMC99_00220 a03a00c605331ef60036b0022fe9cdec 69 SMART SM01234 1 68 2.3E-37 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor AMC99_00266 444a352c482d9c870cab29218f14770d 201 SUPERFAMILY SSF46929 154 198 1.05E-7 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily AMC99_00266 444a352c482d9c870cab29218f14770d 201 Pfam PF14520 Helix-hairpin-helix domain 72 130 9.9E-14 T 11-10-2018 AMC99_00266 444a352c482d9c870cab29218f14770d 201 SUPERFAMILY SSF50249 1 63 1.2E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00266 444a352c482d9c870cab29218f14770d 201 Pfam PF07499 RuvA, C-terminal domain 153 198 3.2E-10 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AMC99_00266 444a352c482d9c870cab29218f14770d 201 SMART SM00278 73 92 1.5 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMC99_00266 444a352c482d9c870cab29218f14770d 201 SMART SM00278 108 127 19.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMC99_00266 444a352c482d9c870cab29218f14770d 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 25.975 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMC99_00266 444a352c482d9c870cab29218f14770d 201 Gene3D G3DSA:1.10.150.20 67 137 1.3E-20 T 11-10-2018 AMC99_00266 444a352c482d9c870cab29218f14770d 201 Gene3D G3DSA:2.40.50.140 1 66 4.3E-20 T 11-10-2018 AMC99_00266 444a352c482d9c870cab29218f14770d 201 Gene3D G3DSA:1.10.8.10 152 198 4.9E-8 T 11-10-2018 AMC99_00266 444a352c482d9c870cab29218f14770d 201 SUPERFAMILY SSF47781 66 132 1.87E-18 T 11-10-2018 IPR010994 RuvA domain 2-like AMC99_00266 444a352c482d9c870cab29218f14770d 201 Pfam PF01330 RuvA N terminal domain 1 62 1.0E-17 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMC99_02074 0ae879f1fd2c884cf89451c44c86a354 266 SUPERFAMILY SSF46785 3 73 1.36E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02074 0ae879f1fd2c884cf89451c44c86a354 266 Gene3D G3DSA:3.40.190.10 122 219 2.3E-30 T 11-10-2018 AMC99_02074 0ae879f1fd2c884cf89451c44c86a354 266 Pfam PF03466 LysR substrate binding domain 50 248 4.2E-21 T 11-10-2018 IPR005119 LysR, substrate-binding AMC99_02074 0ae879f1fd2c884cf89451c44c86a354 266 SUPERFAMILY SSF53850 52 251 1.32E-23 T 11-10-2018 AMC99_02074 0ae879f1fd2c884cf89451c44c86a354 266 Gene3D G3DSA:3.40.190.10 62 245 2.3E-30 T 11-10-2018 AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 SUPERFAMILY SSF143120 8 57 2.09E-8 T 11-10-2018 IPR036165 YefM-like superfamily AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 Pfam PF13426 PAS domain 202 267 0.27 T 11-10-2018 IPR000014 PAS domain AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 Gene3D G3DSA:3.30.450.20 63 173 1.7E-17 T 11-10-2018 AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 8 51 3.4E-8 T 11-10-2018 AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 SUPERFAMILY SSF55785 80 173 8.83E-9 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 SUPERFAMILY SSF55785 196 290 2.27E-6 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 SMART SM00091 185 251 1.5 T 11-10-2018 IPR000014 PAS domain AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 SMART SM00091 67 133 2.4 T 11-10-2018 IPR000014 PAS domain AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 7 66 6.0E-8 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMC99_01138 dafb4e489da04bab5283d8ffd6318f46 295 Pfam PF08448 PAS fold 78 174 6.8E-6 T 11-10-2018 IPR013656 PAS fold-4 AMC99_00883 dc165c8b73d9f761e38a8a49cffae90a 451 Pfam PF00982 Glycosyltransferase family 20 10 445 2.8E-127 T 11-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 AMC99_00883 dc165c8b73d9f761e38a8a49cffae90a 451 Gene3D G3DSA:3.40.50.2000 222 430 2.3E-155 T 11-10-2018 AMC99_00883 dc165c8b73d9f761e38a8a49cffae90a 451 Gene3D G3DSA:3.40.50.2000 11 440 2.3E-155 T 11-10-2018 AMC99_00883 dc165c8b73d9f761e38a8a49cffae90a 451 SUPERFAMILY SSF53756 10 445 6.91E-140 T 11-10-2018 AMC99_00713 978ad1c0de7434b181d591d90db308c1 271 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMC99_00713 978ad1c0de7434b181d591d90db308c1 271 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 263 1.3E-77 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMC99_00713 978ad1c0de7434b181d591d90db308c1 271 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 267 34.437 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMC99_00713 978ad1c0de7434b181d591d90db308c1 271 Gene3D G3DSA:3.10.310.10 5 261 1.2E-88 T 11-10-2018 AMC99_00713 978ad1c0de7434b181d591d90db308c1 271 SUPERFAMILY SSF54506 137 265 3.66E-48 T 11-10-2018 AMC99_00713 978ad1c0de7434b181d591d90db308c1 271 SUPERFAMILY SSF54506 3 125 6.48E-38 T 11-10-2018 AMC99_00713 978ad1c0de7434b181d591d90db308c1 271 Gene3D G3DSA:3.10.310.10 110 256 1.2E-88 T 11-10-2018 AMC99_00713 978ad1c0de7434b181d591d90db308c1 271 Pfam PF01678 Diaminopimelate epimerase 5 118 3.4E-22 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMC99_00713 978ad1c0de7434b181d591d90db308c1 271 Pfam PF01678 Diaminopimelate epimerase 146 259 6.0E-28 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 SUPERFAMILY SSF47384 160 236 2.75E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 351 369 6.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 388 6.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 6.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 SMART SM00387 278 391 6.9E-41 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 SMART SM00388 167 235 3.2E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 Gene3D G3DSA:3.30.565.10 245 396 3.0E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 Gene3D G3DSA:1.10.287.130 161 235 5.2E-24 T 11-10-2018 AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 169 234 2.5E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 389 3.3E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01029 d15ed9a0d5bd608612db08cba2c8d6b4 399 SUPERFAMILY SSF55874 224 391 3.01E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01706 4cbe6c248ed6952e9c0d41dd29a667c6 204 Pfam PF00694 Aconitase C-terminal domain 3 117 8.6E-28 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AMC99_01706 4cbe6c248ed6952e9c0d41dd29a667c6 204 Gene3D G3DSA:3.20.19.10 1 166 1.4E-65 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMC99_01706 4cbe6c248ed6952e9c0d41dd29a667c6 204 SUPERFAMILY SSF52016 1 187 1.63E-53 T 11-10-2018 AMC99_01706 4cbe6c248ed6952e9c0d41dd29a667c6 204 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 192 36.397 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AMC99_01706 4cbe6c248ed6952e9c0d41dd29a667c6 204 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 178 1.4E-56 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 AMC99_00130 82c5197633c2d3f2b55d5676a1ba5f8a 509 SUPERFAMILY SSF54862 1 493 1.05E-176 T 11-10-2018 AMC99_00130 82c5197633c2d3f2b55d5676a1ba5f8a 509 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 4.3E-295 T 11-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AMC99_00130 82c5197633c2d3f2b55d5676a1ba5f8a 509 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 1.4E-27 T 11-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AMC99_00130 82c5197633c2d3f2b55d5676a1ba5f8a 509 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.8E-37 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_00130 82c5197633c2d3f2b55d5676a1ba5f8a 509 Gene3D G3DSA:3.30.70.20 1 303 3.0E-102 T 11-10-2018 AMC99_00130 82c5197633c2d3f2b55d5676a1ba5f8a 509 Gene3D G3DSA:1.10.3650.10 358 434 6.4E-27 T 11-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 AMC99_01632 307b0909e2bf6929bd220dfa7350e8bb 141 SUPERFAMILY SSF46955 15 82 1.24E-15 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMC99_01632 307b0909e2bf6929bd220dfa7350e8bb 141 Pfam PF13411 MerR HTH family regulatory protein 15 82 6.0E-22 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_01632 307b0909e2bf6929bd220dfa7350e8bb 141 Gene3D G3DSA:1.10.1660.10 9 82 1.4E-22 T 11-10-2018 AMC99_01632 307b0909e2bf6929bd220dfa7350e8bb 141 SMART SM00422 15 84 1.5E-4 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_02655 9adba2d6ffcf96ccd83eb6583cae18d1 170 Pfam PF12804 MobA-like NTP transferase domain 5 143 2.7E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase AMC99_02655 9adba2d6ffcf96ccd83eb6583cae18d1 170 SUPERFAMILY SSF53448 1 168 1.81E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_02655 9adba2d6ffcf96ccd83eb6583cae18d1 170 Gene3D G3DSA:3.90.550.10 2 170 3.6E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 289 4.2E-104 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 Pfam PF00231 ATP synthase 3 289 1.8E-96 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 8.7E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 PRINTS PR00126 ATP synthase gamma subunit signature 170 187 8.7E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 8.7E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 8.7E-31 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 289 34.064 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 PIRSF PIRSF039089 1 289 3.2E-101 T 11-10-2018 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 SUPERFAMILY SSF52943 2 289 1.83E-88 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 Gene3D G3DSA:3.40.1380.10 61 208 2.4E-94 T 11-10-2018 AMC99_01663 ba63f2ec6232a7b3138a8d121aa3381c 289 Gene3D G3DSA:1.10.287.80 6 285 2.4E-94 T 11-10-2018 AMC99_02616 f6a21f5d88110824140d73937847c4b6 201 Gene3D G3DSA:3.10.560.10 82 170 1.7E-11 T 11-10-2018 AMC99_02616 f6a21f5d88110824140d73937847c4b6 201 Gene3D G3DSA:3.30.1950.10 15 81 1.5E-6 T 11-10-2018 AMC99_02616 f6a21f5d88110824140d73937847c4b6 201 Pfam PF02563 Polysaccharide biosynthesis/export protein 13 81 1.2E-12 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 SUPERFAMILY SSF51905 2 309 9.26E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 4.2E-70 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 4.2E-70 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 4.2E-70 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 4.2E-70 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 4.2E-70 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 4.2E-70 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 4.2E-70 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 4.2E-70 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 4.2E-70 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.3E-37 T 11-10-2018 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.3E-37 T 11-10-2018 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-37 T 11-10-2018 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.3E-37 T 11-10-2018 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.3E-37 T 11-10-2018 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 Gene3D G3DSA:3.50.50.60 9 307 2.8E-113 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 298 6.4E-50 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 309 4.8E-116 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AMC99_00886 dfe6254064249ee058f5232b8d5e421d 328 Gene3D G3DSA:3.50.50.60 124 248 2.8E-113 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 380 6.1E-39 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 Gene3D G3DSA:1.10.540.10 4 122 3.8E-32 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 4.4E-27 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 Gene3D G3DSA:2.40.110.10 124 238 9.2E-43 T 11-10-2018 AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 SUPERFAMILY SSF47203 230 379 3.38E-47 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 121 2.0E-30 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 Gene3D G3DSA:1.20.140.10 239 380 2.0E-42 T 11-10-2018 AMC99_01718 012b9f6395e10a17b6c8377cace1726e 380 SUPERFAMILY SSF56645 7 244 1.03E-82 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 Gene3D G3DSA:3.40.50.720 2 254 9.2E-83 T 11-10-2018 AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 2.8E-63 T 11-10-2018 AMC99_00465 3571018c493137e4ae925547b9ca7fd3 254 SUPERFAMILY SSF51735 8 254 7.3E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 Pfam PF03448 MgtE intracellular N domain 68 169 1.1E-21 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 SMART SM00924 68 171 8.2E-30 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 Pfam PF01769 Divalent cation transporter 354 474 1.9E-23 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 SUPERFAMILY SSF54631 170 302 5.68E-25 T 11-10-2018 AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 SUPERFAMILY SSF161093 310 478 2.48E-45 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 Pfam PF00571 CBS domain 236 289 1.4E-4 T 11-10-2018 IPR000644 CBS domain AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 SUPERFAMILY SSF158791 43 168 1.44E-27 T 11-10-2018 AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 Gene3D G3DSA:1.10.357.20 308 480 3.0E-47 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 Gene3D G3DSA:1.25.60.10 39 166 4.6E-19 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 Gene3D G3DSA:3.10.580.10 167 294 2.0E-34 T 11-10-2018 AMC99_01620 68c7b01097b6f3eb8d73379cac3394ba 486 TIGRFAM TIGR00400 mgtE: magnesium transporter 50 478 5.3E-85 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Pfam PF02769 AIR synthase related protein, C-terminal domain 202 353 2.2E-33 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Pfam PF02769 AIR synthase related protein, C-terminal domain 576 715 1.0E-14 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 750 316.874 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 SUPERFAMILY SSF56042 200 427 3.14E-57 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 18 747 1.5E-278 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 SUPERFAMILY SSF55326 399 570 1.57E-54 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 PIRSF PIRSF001587 3 750 2.6E-286 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Gene3D G3DSA:3.90.650.10 29 353 5.2E-131 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Gene3D G3DSA:3.90.650.10 570 750 2.3E-31 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Pfam PF00586 AIR synthase related protein, N-terminal domain 441 562 1.7E-22 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Pfam PF00586 AIR synthase related protein, N-terminal domain 87 188 2.4E-21 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 SUPERFAMILY SSF55326 14 196 1.14E-49 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Gene3D G3DSA:3.30.1330.10 390 565 2.9E-54 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 Gene3D G3DSA:3.30.1330.10 44 192 5.2E-131 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMC99_01053 6e55b7bb1cde1c0a59cb6ed5571d81b3 750 SUPERFAMILY SSF56042 572 748 1.74E-32 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMC99_01439 df7fa90658e2ce8f69ae6ded74a30818 224 SMART SM00934 4 220 4.5E-83 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_01439 df7fa90658e2ce8f69ae6ded74a30818 224 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 220 3.3E-43 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_01439 df7fa90658e2ce8f69ae6ded74a30818 224 Gene3D G3DSA:3.20.20.70 1 224 2.0E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01439 df7fa90658e2ce8f69ae6ded74a30818 224 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 224 31.204 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_01439 df7fa90658e2ce8f69ae6ded74a30818 224 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_01439 df7fa90658e2ce8f69ae6ded74a30818 224 SUPERFAMILY SSF51366 2 222 6.77E-66 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMC99_01439 df7fa90658e2ce8f69ae6ded74a30818 224 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 220 3.3E-49 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_01690 d5ce91e4edb105d6a86151f96fbba1fd 311 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 83 302 3.0E-83 T 11-10-2018 IPR014319 Phage shock protein, PspA AMC99_01690 d5ce91e4edb105d6a86151f96fbba1fd 311 Pfam PF04012 PspA/IM30 family 84 302 2.1E-34 T 11-10-2018 IPR007157 PspA/IM30 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 SUPERFAMILY SSF56327 146 315 4.47E-55 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 307 1.4E-28 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 4.4E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 4.4E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 4.4E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 4.4E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 4.4E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 PIRSF PIRSF000102 1 316 7.5E-105 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 310 6.4E-129 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 SUPERFAMILY SSF51735 5 144 2.46E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 3.4E-41 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 Gene3D G3DSA:3.40.50.720 1 145 9.6E-57 T 11-10-2018 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 313 46.178 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AMC99_01505 682e02feabe00385b3add8bf7faa57fc 320 Gene3D G3DSA:3.90.110.10 146 320 8.1E-63 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 SUPERFAMILY SSF46785 2 68 8.13E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 SUPERFAMILY SSF51306 105 226 3.31E-30 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 TIGRFAM TIGR00498 lexA: repressor LexA 2 228 3.9E-51 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 Hamap MF_00015 LexA repressor [lexA]. 1 228 33.235 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 Gene3D G3DSA:1.10.10.10 1 68 6.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 Pfam PF01726 LexA DNA binding domain 2 63 9.5E-16 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 141 151 3.3E-7 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 152 163 3.3E-7 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 181 193 3.3E-7 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 Pfam PF00717 Peptidase S24-like 144 210 3.8E-14 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_01232 9222aca0aed598a5ef4c220bf92186e4 229 Gene3D G3DSA:2.10.109.10 111 228 1.1E-34 T 11-10-2018 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 281 298 2.0E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 31 47 2.0E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 124 136 2.0E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 330 343 2.0E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 261 276 2.0E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 190 217 2.0E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 PRINTS PR00992 Alanine racemase signature 244 259 2.0E-37 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 Pfam PF00842 Alanine racemase, C-terminal domain 232 344 6.3E-28 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 Gene3D G3DSA:3.20.20.10 15 215 1.3E-79 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 Gene3D G3DSA:2.40.37.10 14 344 1.3E-79 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 SUPERFAMILY SSF50621 213 344 1.78E-31 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 SMART SM01005 228 346 2.3E-33 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 SUPERFAMILY SSF51419 14 220 2.36E-48 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 Pfam PF01168 Alanine racemase, N-terminal domain 14 216 3.5E-44 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 Hamap MF_01201 Alanine racemase. 6 345 23.038 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_01166 78022605a1175f3cc7c70aaaa766f686 346 TIGRFAM TIGR00492 alr: alanine racemase 12 345 6.8E-56 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_02181 8dd7740664222391d4b4175a19f63036 252 Gene3D G3DSA:3.40.980.10 5 169 5.8E-48 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_02181 8dd7740664222391d4b4175a19f63036 252 SMART SM00852 9 172 1.3E-29 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_02181 8dd7740664222391d4b4175a19f63036 252 Pfam PF00994 Probable molybdopterin binding domain 10 165 4.5E-28 T 11-10-2018 IPR001453 MoaB/Mog domain AMC99_02181 8dd7740664222391d4b4175a19f63036 252 SUPERFAMILY SSF53218 5 200 3.4E-37 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily AMC99_01588 3e58960d7abada2b37c5eb3fd0d4ddc8 254 SUPERFAMILY SSF53335 63 249 7.2E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01588 3e58960d7abada2b37c5eb3fd0d4ddc8 254 Gene3D G3DSA:3.10.290.10 6 69 1.4E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMC99_01588 3e58960d7abada2b37c5eb3fd0d4ddc8 254 Gene3D G3DSA:3.40.50.150 70 253 7.2E-73 T 11-10-2018 AMC99_01588 3e58960d7abada2b37c5eb3fd0d4ddc8 254 PIRSF PIRSF005578 6 254 9.8E-97 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMC99_01588 3e58960d7abada2b37c5eb3fd0d4ddc8 254 Pfam PF01728 FtsJ-like methyltransferase 67 248 9.6E-21 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMC99_01588 3e58960d7abada2b37c5eb3fd0d4ddc8 254 SUPERFAMILY SSF55174 10 75 2.65E-9 T 11-10-2018 AMC99_01588 3e58960d7abada2b37c5eb3fd0d4ddc8 254 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 12 243 7.4E-71 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMC99_01588 3e58960d7abada2b37c5eb3fd0d4ddc8 254 SMART SM00363 11 73 0.0024 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_00026 e696f2e7c01d69dbaa20af322d3a39b4 99 SUPERFAMILY SSF50199 1 95 2.48E-19 T 11-10-2018 AMC99_00026 e696f2e7c01d69dbaa20af322d3a39b4 99 Gene3D G3DSA:2.40.50.90 1 88 2.3E-17 T 11-10-2018 IPR035437 SNase-like, OB-fold superfamily AMC99_00026 e696f2e7c01d69dbaa20af322d3a39b4 99 Pfam PF00565 Staphylococcal nuclease homologue 12 91 9.4E-9 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 379 476 1.4E-12 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 Gene3D G3DSA:1.10.8.870 392 461 1.7E-20 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 9.1E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 315 321 9.1E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 9.1E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 349 361 9.1E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 9.1E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 9.1E-29 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 Gene3D G3DSA:3.50.50.60 6 368 3.8E-133 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 Gene3D G3DSA:3.30.9.10 83 322 3.8E-133 T 11-10-2018 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 Pfam PF01266 FAD dependent oxidoreductase 6 325 2.6E-50 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 SUPERFAMILY SSF51905 4 301 2.78E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00737 04264f6ca52d68a8a7735efbe52bdcab 493 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 354 364 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 AMC99_02598 fc0e616f5aad767c15a2226b137a01ca 367 Gene3D G3DSA:3.40.50.2000 183 365 1.8E-29 T 11-10-2018 AMC99_02598 fc0e616f5aad767c15a2226b137a01ca 367 Gene3D G3DSA:3.40.50.2000 14 180 5.1E-11 T 11-10-2018 AMC99_02598 fc0e616f5aad767c15a2226b137a01ca 367 SUPERFAMILY SSF53756 15 363 1.1E-56 T 11-10-2018 AMC99_02598 fc0e616f5aad767c15a2226b137a01ca 367 Pfam PF00534 Glycosyl transferases group 1 184 343 3.0E-20 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMC99_02598 fc0e616f5aad767c15a2226b137a01ca 367 Pfam PF13477 Glycosyl transferase 4-like 12 144 1.8E-16 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 Gene3D G3DSA:1.10.10.60 402 456 5.2E-13 T 11-10-2018 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 Gene3D G3DSA:3.40.50.300 134 311 3.4E-48 T 11-10-2018 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 Gene3D G3DSA:3.40.50.2300 2 133 3.0E-36 T 11-10-2018 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 Pfam PF02954 Bacterial regulatory protein, Fis family 412 450 7.4E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 SMART SM00448 3 116 3.9E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 SUPERFAMILY SSF52540 144 376 7.11E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 SUPERFAMILY SSF52172 3 189 7.26E-40 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 Gene3D G3DSA:1.10.8.60 312 386 5.1E-25 T 11-10-2018 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 Pfam PF00072 Response regulator receiver domain 5 115 5.8E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 SMART SM00382 164 303 1.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 SUPERFAMILY SSF46689 353 454 3.0E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01188 ed8703d0f1418c53d8fc6c2902643dca 466 Pfam PF00158 Sigma-54 interaction domain 145 306 2.2E-48 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_01291 1e6466f5f35fa5d84c09fea7fc52f839 342 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 36 285 2.4E-51 T 11-10-2018 IPR019127 Exosortase AMC99_01291 1e6466f5f35fa5d84c09fea7fc52f839 342 TIGRFAM TIGR03109 exosortase_1: exosortase A 22 286 1.9E-85 T 11-10-2018 IPR017540 Exosortase 1 AMC99_01291 1e6466f5f35fa5d84c09fea7fc52f839 342 TIGRFAM TIGR02602 8TM_EpsH: exosortase 51 279 2.3E-50 T 11-10-2018 IPR013426 Exosortase, EpsH-like AMC99_01291 1e6466f5f35fa5d84c09fea7fc52f839 342 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 191 284 5.6E-18 T 11-10-2018 IPR026392 Exosortase/Archaeosortase domain AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 Gene3D G3DSA:3.40.50.10860 8 282 8.0E-97 T 11-10-2018 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 SUPERFAMILY SSF53223 3 122 4.6E-37 T 11-10-2018 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 SUPERFAMILY SSF51735 124 288 2.98E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 289 35.417 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 245 261 5.5E-72 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.5E-72 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.5E-72 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.5E-72 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.5E-72 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 262 280 5.5E-72 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.5E-72 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 3.3E-38 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 Gene3D G3DSA:3.40.50.720 6 265 8.0E-97 T 11-10-2018 AMC99_02275 d55ec78603a1321fffd82dd6ce190e3d 297 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 287 6.1E-58 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AMC99_00990 444fe7c0b8e6090b9aa5ae0387be7192 408 Pfam PF03734 L,D-transpeptidase catalytic domain 276 405 3.7E-16 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMC99_00990 444fe7c0b8e6090b9aa5ae0387be7192 408 SUPERFAMILY SSF141523 274 405 3.53E-25 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_00990 444fe7c0b8e6090b9aa5ae0387be7192 408 SUPERFAMILY SSF47090 61 124 8.16E-14 T 11-10-2018 IPR036365 PGBD-like superfamily AMC99_00990 444fe7c0b8e6090b9aa5ae0387be7192 408 Pfam PF01471 Putative peptidoglycan binding domain 67 120 6.7E-11 T 11-10-2018 IPR002477 Peptidoglycan binding-like AMC99_00990 444fe7c0b8e6090b9aa5ae0387be7192 408 Gene3D G3DSA:1.10.101.10 56 123 9.6E-11 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 AMC99_00990 444fe7c0b8e6090b9aa5ae0387be7192 408 Gene3D G3DSA:2.40.440.10 231 408 4.1E-40 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_01018 226ae017a6e9a6a873f2f078e422df38 1177 Gene3D G3DSA:3.20.20.140 14 306 1.1E-52 T 11-10-2018 AMC99_01018 226ae017a6e9a6a873f2f078e422df38 1177 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 328 761 1.5E-140 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_01018 226ae017a6e9a6a873f2f078e422df38 1177 Pfam PF01336 OB-fold nucleic acid binding domain 1021 1094 1.8E-7 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMC99_01018 226ae017a6e9a6a873f2f078e422df38 1177 Pfam PF14579 Helix-hairpin-helix motif 835 936 6.9E-24 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_01018 226ae017a6e9a6a873f2f078e422df38 1177 SMART SM00481 29 96 1.5E-4 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMC99_01018 226ae017a6e9a6a873f2f078e422df38 1177 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 28 1177 13.346 T 11-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_01018 226ae017a6e9a6a873f2f078e422df38 1177 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 222 1056 3.4E-154 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_01018 226ae017a6e9a6a873f2f078e422df38 1177 Pfam PF02811 PHP domain 35 148 4.8E-6 T 11-10-2018 IPR004013 PHP domain GO:0003824 AMC99_01587 f3a4fa47bb664fcdd84d4b064e95fa51 182 PIRSF PIRSF005859 9 166 5.2E-37 T 11-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 AMC99_01587 f3a4fa47bb664fcdd84d4b064e95fa51 182 Gene3D G3DSA:1.20.1260.100 15 167 1.4E-37 T 11-10-2018 IPR038330 TspO/MBR-related superfamily AMC99_01587 f3a4fa47bb664fcdd84d4b064e95fa51 182 Pfam PF03073 TspO/MBR family 24 161 7.4E-34 T 11-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 AMC99_01379 e4e35df9d297fc8f3f8cdf432e7db427 589 Pfam PF07969 Amidohydrolase family 45 562 1.4E-49 T 11-10-2018 IPR013108 Amidohydrolase 3 AMC99_01379 e4e35df9d297fc8f3f8cdf432e7db427 589 SUPERFAMILY SSF51556 57 508 1.63E-65 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_01379 e4e35df9d297fc8f3f8cdf432e7db427 589 Gene3D G3DSA:3.20.20.140 474 531 6.6E-6 T 11-10-2018 AMC99_01379 e4e35df9d297fc8f3f8cdf432e7db427 589 Gene3D G3DSA:3.20.20.140 60 322 3.0E-59 T 11-10-2018 AMC99_01379 e4e35df9d297fc8f3f8cdf432e7db427 589 Gene3D G3DSA:2.30.40.10 1 59 5.5E-6 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_01379 e4e35df9d297fc8f3f8cdf432e7db427 589 SUPERFAMILY SSF51338 4 574 2.88E-22 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_01224 30e2908ebc6de5255e0d81a6973e7ad1 403 Pfam PF04715 Anthranilate synthase component I, N terminal region 1 70 1.8E-11 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_01224 30e2908ebc6de5255e0d81a6973e7ad1 403 SUPERFAMILY SSF56322 12 388 4.84E-134 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMC99_01224 30e2908ebc6de5255e0d81a6973e7ad1 403 Pfam PF00425 chorismate binding enzyme 123 381 2.5E-94 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal AMC99_01224 30e2908ebc6de5255e0d81a6973e7ad1 403 PRINTS PR00095 Anthranilate synthase component I signature 229 242 1.5E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_01224 30e2908ebc6de5255e0d81a6973e7ad1 403 PRINTS PR00095 Anthranilate synthase component I signature 323 337 1.5E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_01224 30e2908ebc6de5255e0d81a6973e7ad1 403 PRINTS PR00095 Anthranilate synthase component I signature 243 256 1.5E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_01224 30e2908ebc6de5255e0d81a6973e7ad1 403 PRINTS PR00095 Anthranilate synthase component I signature 338 352 1.5E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_01224 30e2908ebc6de5255e0d81a6973e7ad1 403 Gene3D G3DSA:3.60.120.10 1 399 3.3E-147 T 11-10-2018 IPR005801 ADC synthase GO:0009058 AMC99_02337 950d4e54c09af3956f4637527a0614bd 625 Pfam PF00557 Metallopeptidase family M24 336 553 1.3E-44 T 11-10-2018 IPR000994 Peptidase M24 AMC99_02337 950d4e54c09af3956f4637527a0614bd 625 SUPERFAMILY SSF55920 329 591 8.37E-56 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AMC99_02337 950d4e54c09af3956f4637527a0614bd 625 Pfam PF01321 Creatinase/Prolidase N-terminal domain 33 164 1.9E-17 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AMC99_02337 950d4e54c09af3956f4637527a0614bd 625 SUPERFAMILY SSF53092 31 155 6.98E-10 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMC99_02337 950d4e54c09af3956f4637527a0614bd 625 Pfam PF16189 Creatinase/Prolidase N-terminal domain 174 332 5.7E-38 T 11-10-2018 AMC99_02337 950d4e54c09af3956f4637527a0614bd 625 Gene3D G3DSA:3.90.230.10 326 625 3.3E-95 T 11-10-2018 AMC99_02337 950d4e54c09af3956f4637527a0614bd 625 Gene3D G3DSA:3.40.350.10 173 310 4.3E-29 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMC99_02337 950d4e54c09af3956f4637527a0614bd 625 Gene3D G3DSA:3.40.350.10 20 172 9.3E-42 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMC99_02337 950d4e54c09af3956f4637527a0614bd 625 Pfam PF16188 C-terminal region of peptidase_M24 566 625 1.2E-23 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain AMC99_02173 45e4603d925d4b0e9bd6c88c99a1f86f 367 PIRSF PIRSF009283 2 360 8.0E-107 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMC99_02173 45e4603d925d4b0e9bd6c88c99a1f86f 367 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 164 279 1.0E-15 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_02173 45e4603d925d4b0e9bd6c88c99a1f86f 367 Gene3D G3DSA:3.10.180.10 159 360 2.8E-63 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_02173 45e4603d925d4b0e9bd6c88c99a1f86f 367 SUPERFAMILY SSF54593 6 346 8.27E-77 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_02173 45e4603d925d4b0e9bd6c88c99a1f86f 367 Gene3D G3DSA:3.10.180.10 2 158 3.0E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_02173 45e4603d925d4b0e9bd6c88c99a1f86f 367 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 147 1.2E-67 T 11-10-2018 AMC99_02173 45e4603d925d4b0e9bd6c88c99a1f86f 367 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 13 359 3.8E-111 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 AMC99_01275 904757df4f04b15d0ecd2ea55bb8e6d2 837 Gene3D G3DSA:3.90.1310.20 81 328 1.3E-75 T 11-10-2018 AMC99_01275 904757df4f04b15d0ecd2ea55bb8e6d2 837 Pfam PF00912 Transglycosylase 82 259 4.4E-54 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01275 904757df4f04b15d0ecd2ea55bb8e6d2 837 SUPERFAMILY SSF53955 69 284 9.0E-63 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMC99_01275 904757df4f04b15d0ecd2ea55bb8e6d2 837 SUPERFAMILY SSF56601 244 791 6.04E-109 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_01275 904757df4f04b15d0ecd2ea55bb8e6d2 837 Pfam PF00905 Penicillin binding protein transpeptidase domain 441 730 7.2E-23 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_01275 904757df4f04b15d0ecd2ea55bb8e6d2 837 Gene3D G3DSA:1.10.3810.10 92 286 1.3E-75 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01275 904757df4f04b15d0ecd2ea55bb8e6d2 837 Gene3D G3DSA:3.40.710.10 329 397 1.3E-75 T 11-10-2018 AMC99_01275 904757df4f04b15d0ecd2ea55bb8e6d2 837 Gene3D G3DSA:3.40.710.10 420 777 8.3E-87 T 11-10-2018 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 SUPERFAMILY SSF52016 631 888 2.94E-88 T 11-10-2018 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 888 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 Gene3D G3DSA:3.20.19.10 654 890 2.3E-104 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 Gene3D G3DSA:3.30.499.20 9 376 3.3E-158 T 11-10-2018 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 Pfam PF00330 Aconitase family (aconitate hydratase) 72 562 5.5E-183 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 Gene3D G3DSA:1.10.1440.20 591 652 7.0E-19 T 11-10-2018 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 SUPERFAMILY SSF53732 8 626 1.57E-220 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 Gene3D G3DSA:3.30.499.10 377 590 4.7E-94 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 376 390 2.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 283 296 2.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 493 506 2.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 149 162 2.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 297 310 2.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 431 442 2.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 207 220 2.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 221 236 2.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 PRINTS PR00415 Aconitase family signature 173 181 2.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 Pfam PF00694 Aconitase C-terminal domain 692 816 3.0E-44 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AMC99_00273 0f07da1cd3b4fb31fc974b1e469e9910 891 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PIRSF PIRSF000350 9 469 2.7E-86 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 360 468 2.4E-33 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 Gene3D G3DSA:3.50.50.60 26 339 1.8E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 356 377 9.4E-67 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 27 49 9.4E-67 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 59 74 9.4E-67 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 190 215 9.4E-67 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 290 9.4E-67 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 443 463 9.4E-67 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 9.4E-67 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 436 9.4E-67 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 319 326 9.4E-67 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 27 339 2.3E-68 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 SUPERFAMILY SSF51905 21 385 9.5E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 60 70 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 Gene3D G3DSA:3.50.50.60 165 282 1.8E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 Gene3D G3DSA:3.30.390.30 359 469 1.3E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 28 47 3.0E-29 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 3.0E-29 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 190 208 3.0E-29 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 291 3.0E-29 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 304 326 3.0E-29 T 11-10-2018 AMC99_00916 d13db6af3aab036e03b871f51c6eea3b 469 SUPERFAMILY SSF55424 356 468 1.72E-34 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMC99_02277 e0a9ddd874840bd706bf778dd407806c 299 Gene3D G3DSA:3.40.1160.10 6 298 2.6E-95 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_02277 e0a9ddd874840bd706bf778dd407806c 299 SUPERFAMILY SSF53633 10 298 3.53E-92 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_02277 e0a9ddd874840bd706bf778dd407806c 299 PIRSF PIRSF000728 14 298 2.6E-107 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMC99_02277 e0a9ddd874840bd706bf778dd407806c 299 TIGRFAM TIGR00761 argB: acetylglutamate kinase 30 273 1.5E-75 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMC99_02277 e0a9ddd874840bd706bf778dd407806c 299 PRINTS PR00474 Glutamate 5-kinase family signature 60 74 3.4E-8 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_02277 e0a9ddd874840bd706bf778dd407806c 299 PRINTS PR00474 Glutamate 5-kinase family signature 248 268 3.4E-8 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_02277 e0a9ddd874840bd706bf778dd407806c 299 PRINTS PR00474 Glutamate 5-kinase family signature 198 225 3.4E-8 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_02277 e0a9ddd874840bd706bf778dd407806c 299 Hamap MF_00082 Acetylglutamate kinase [argB]. 28 291 49.873 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMC99_02277 e0a9ddd874840bd706bf778dd407806c 299 Pfam PF00696 Amino acid kinase family 30 272 1.2E-45 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 Gene3D G3DSA:1.10.730.10 6 773 9.7E-277 T 11-10-2018 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 SUPERFAMILY SSF47323 611 857 8.6E-50 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 Pfam PF08264 Anticodon-binding domain of tRNA 641 785 3.7E-36 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 SUPERFAMILY SSF52374 4 608 5.01E-135 T 11-10-2018 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 3.8E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 238 255 3.8E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 479 500 3.8E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 510 528 3.8E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 PRINTS PR00986 Valyl-tRNA synthetase signature 381 394 3.8E-34 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 890 9.7E-303 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 SUPERFAMILY SSF50677 194 354 4.45E-47 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 909 15.147 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 Gene3D G3DSA:1.10.287.380 837 909 8.9E-17 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 Gene3D G3DSA:3.40.50.620 25 559 9.7E-277 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 598 1.7E-187 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 Gene3D G3DSA:3.90.740.10 177 375 9.7E-277 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 SUPERFAMILY SSF46589 844 908 3.77E-13 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMC99_01973 651bada7f881715ad9f7f757a667f65a 909 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 844 909 7.4E-16 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMC99_00944 f66d6b7104033970d3e707b660e99922 141 Gene3D G3DSA:3.10.129.10 10 141 3.8E-42 T 11-10-2018 AMC99_00944 f66d6b7104033970d3e707b660e99922 141 Pfam PF03061 Thioesterase superfamily 57 127 5.2E-13 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_00944 f66d6b7104033970d3e707b660e99922 141 SUPERFAMILY SSF54637 9 139 3.37E-22 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00944 f66d6b7104033970d3e707b660e99922 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 139 4.8E-10 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMC99_00046 6196def58a10a4f4680e2315306bc929 132 Gene3D G3DSA:2.40.50.140 1 118 9.3E-35 T 11-10-2018 AMC99_00046 6196def58a10a4f4680e2315306bc929 132 PIRSF PIRSF002070 1 130 5.1E-34 T 11-10-2018 AMC99_00046 6196def58a10a4f4680e2315306bc929 132 Hamap MF_00984 Single-stranded DNA-binding protein. 2 117 25.51 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMC99_00046 6196def58a10a4f4680e2315306bc929 132 SUPERFAMILY SSF50249 1 125 1.13E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00046 6196def58a10a4f4680e2315306bc929 132 Pfam PF00436 Single-strand binding protein family 3 113 1.7E-28 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AMC99_00046 6196def58a10a4f4680e2315306bc929 132 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 120 1.8E-27 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 SUPERFAMILY SSF46689 364 453 6.05E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 Gene3D G3DSA:3.40.50.2300 1 141 8.5E-22 T 11-10-2018 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 9 453 3.1E-203 T 11-10-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 SUPERFAMILY SSF52172 7 195 3.7E-28 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 417 434 1.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 454 1.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 SMART SM00448 7 121 1.8E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 Pfam PF00072 Response regulator receiver domain 10 118 5.8E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 237 252 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 364 373 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 Gene3D G3DSA:3.40.50.300 142 322 4.0E-64 T 11-10-2018 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 Gene3D G3DSA:1.10.10.60 403 455 8.8E-16 T 11-10-2018 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 SMART SM00382 171 314 1.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 Gene3D G3DSA:1.10.8.60 324 395 1.2E-20 T 11-10-2018 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 Pfam PF02954 Bacterial regulatory protein, Fis family 411 451 5.5E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 Pfam PF00158 Sigma-54 interaction domain 152 316 1.7E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_01006 e0e3d748dc88d09f580a6bd48c5dbd15 455 SUPERFAMILY SSF52540 155 392 5.45E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 Gene3D G3DSA:1.10.760.10 88 286 4.8E-60 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 PIRSF PIRSF000006 4 290 1.5E-99 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 SUPERFAMILY SSF46626 35 205 7.39E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 Gene3D G3DSA:1.20.58.1490 4 73 8.2E-21 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 10 290 1.1E-97 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 114 198 1.3E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 209 283 3.0E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 Gene3D G3DSA:1.10.760.10 179 263 4.8E-60 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 18 62 6.9E-23 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 SUPERFAMILY SSF46626 209 289 2.82E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 PRINTS PR00605 Class IC cytochrome C signature 261 283 3.6E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMC99_00356 69d1419e523ececacdecc5cef4523e59 311 PRINTS PR00605 Class IC cytochrome C signature 217 228 3.6E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 SUPERFAMILY SSF55021 352 420 4.31E-11 T 11-10-2018 AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 Gene3D G3DSA:3.30.360.10 138 349 6.2E-139 T 11-10-2018 AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 Gene3D G3DSA:3.30.70.260 350 421 6.2E-139 T 11-10-2018 AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 SUPERFAMILY SSF51735 4 142 2.8E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 130 6.1E-12 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 SUPERFAMILY SSF55347 139 309 1.05E-49 T 11-10-2018 AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 Pfam PF01842 ACT domain 355 405 5.5E-10 T 11-10-2018 IPR002912 ACT domain AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 PIRSF PIRSF000098 2 435 2.3E-142 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 Gene3D G3DSA:3.40.50.720 5 342 6.2E-139 T 11-10-2018 AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 185 207 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMC99_02686 c46775a027b5a41f93c60133fc1ff5fc 436 Pfam PF00742 Homoserine dehydrogenase 139 322 1.8E-62 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 AMC99_01262 e6e7b67fd2f2ca143a3828c76576e022 476 Pfam PF00171 Aldehyde dehydrogenase family 3 445 9.3E-87 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_01262 e6e7b67fd2f2ca143a3828c76576e022 476 SUPERFAMILY SSF53720 6 446 1.09E-109 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_01262 e6e7b67fd2f2ca143a3828c76576e022 476 Gene3D G3DSA:3.40.309.10 221 425 1.9E-148 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_01262 e6e7b67fd2f2ca143a3828c76576e022 476 PIRSF PIRSF036492 1 476 5.1E-155 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 AMC99_01262 e6e7b67fd2f2ca143a3828c76576e022 476 Gene3D G3DSA:3.40.605.10 17 445 1.9E-148 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_01262 e6e7b67fd2f2ca143a3828c76576e022 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMC99_02457 f3316cf5c62d7c61078bd931e73ca80d 239 Pfam PF07277 SapC 7 228 2.6E-66 T 11-10-2018 IPR010836 SapC AMC99_01179 aa58d846a443df12fbfb339be3a3ca7c 214 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMC99_01179 aa58d846a443df12fbfb339be3a3ca7c 214 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 5 203 2.3E-46 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMC99_01179 aa58d846a443df12fbfb339be3a3ca7c 214 SUPERFAMILY SSF52540 5 210 5.29E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01179 aa58d846a443df12fbfb339be3a3ca7c 214 Pfam PF02223 Thymidylate kinase 12 202 2.9E-43 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMC99_01179 aa58d846a443df12fbfb339be3a3ca7c 214 Hamap MF_00165 Thymidylate kinase [tmk]. 8 211 27.016 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AMC99_01179 aa58d846a443df12fbfb339be3a3ca7c 214 Gene3D G3DSA:3.40.50.300 4 211 3.4E-62 T 11-10-2018 AMC99_01148 e9907cc861bf360a5c8e8335bc7a5e3b 383 Gene3D G3DSA:3.80.30.20 2 298 2.3E-91 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_01148 e9907cc861bf360a5c8e8335bc7a5e3b 383 Pfam PF06969 HemN C-terminal domain 303 365 3.5E-8 T 11-10-2018 IPR010723 HemN, C-terminal AMC99_01148 e9907cc861bf360a5c8e8335bc7a5e3b 383 Pfam PF04055 Radical SAM superfamily 7 174 3.2E-21 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_01148 e9907cc861bf360a5c8e8335bc7a5e3b 383 SUPERFAMILY SSF102114 3 372 6.02E-102 T 11-10-2018 AMC99_01148 e9907cc861bf360a5c8e8335bc7a5e3b 383 SMART SM00729 2 221 4.0E-51 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_01148 e9907cc861bf360a5c8e8335bc7a5e3b 383 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 342 1.7E-90 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 AMC99_00908 9385d29e59c46b9fc2914dd7300fe17c 161 SMART SM01022 28 151 6.0E-27 T 11-10-2018 IPR007374 ASCH domain AMC99_00908 9385d29e59c46b9fc2914dd7300fe17c 161 PIRSF PIRSF021320 2 154 1.9E-36 T 11-10-2018 IPR009326 Protein of unknown function DUF984 AMC99_00908 9385d29e59c46b9fc2914dd7300fe17c 161 Pfam PF04266 ASCH domain 40 149 7.1E-16 T 11-10-2018 IPR007374 ASCH domain AMC99_00908 9385d29e59c46b9fc2914dd7300fe17c 161 SUPERFAMILY SSF88697 5 151 5.22E-38 T 11-10-2018 IPR015947 PUA-like superfamily AMC99_00908 9385d29e59c46b9fc2914dd7300fe17c 161 Gene3D G3DSA:3.10.400.10 3 158 2.3E-46 T 11-10-2018 AMC99_00380 dd0028114b8899a5a39b7b64df96e921 394 Pfam PF05834 Lycopene cyclase protein 3 380 4.2E-79 T 11-10-2018 AMC99_00380 dd0028114b8899a5a39b7b64df96e921 394 SUPERFAMILY SSF51905 1 359 2.57E-18 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00380 dd0028114b8899a5a39b7b64df96e921 394 TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 3 380 1.2E-105 T 11-10-2018 IPR010108 Lycopene cyclase, beta/epsilon GO:0016117|GO:0016705 AMC99_00380 dd0028114b8899a5a39b7b64df96e921 394 TIGRFAM TIGR01789 lycopene_cycl: lycopene cyclase 3 381 3.1E-151 T 11-10-2018 IPR008461 Lycopene cyclase GO:0016117|GO:0045436 AMC99_00380 dd0028114b8899a5a39b7b64df96e921 394 Gene3D G3DSA:3.50.50.60 4 137 2.5E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 SUPERFAMILY SSF58014 42 141 2.35E-22 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 Hamap MF_01151 Protein GrpE [grpE]. 13 197 18.013 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 Gene3D G3DSA:3.90.20.20 32 140 1.3E-21 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 PRINTS PR00773 GrpE protein signature 176 195 1.5E-22 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 PRINTS PR00773 GrpE protein signature 63 79 1.5E-22 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 PRINTS PR00773 GrpE protein signature 149 164 1.5E-22 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 PRINTS PR00773 GrpE protein signature 91 106 1.5E-22 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 SUPERFAMILY SSF51064 143 199 4.97E-18 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 Pfam PF01025 GrpE 34 197 3.5E-48 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AMC99_01153 452c6bb34dad194c60d0f59bda787c66 200 Gene3D G3DSA:2.30.22.10 141 197 4.1E-23 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AMC99_02771 f334e05bca032d0b9563103601e22f6f 454 SUPERFAMILY SSF50182 218 284 6.21E-15 T 11-10-2018 IPR010920 LSM domain superfamily AMC99_02771 f334e05bca032d0b9563103601e22f6f 454 Pfam PF04972 BON domain 43 106 1.4E-12 T 11-10-2018 IPR007055 BON domain AMC99_02771 f334e05bca032d0b9563103601e22f6f 454 Gene3D G3DSA:2.30.30.60 234 283 3.8E-9 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMC99_02771 f334e05bca032d0b9563103601e22f6f 454 Gene3D G3DSA:3.30.70.100 284 379 1.3E-11 T 11-10-2018 AMC99_02771 f334e05bca032d0b9563103601e22f6f 454 Pfam PF00924 Mechanosensitive ion channel 175 371 5.1E-37 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_02771 f334e05bca032d0b9563103601e22f6f 454 SUPERFAMILY SSF82689 285 384 4.97E-18 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_02198 69c5861729343f47ccabe82c674c81e1 388 Pfam PF09594 Glycosyltransferase family 87 88 309 1.1E-25 T 11-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 156 30.847 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 Gene3D G3DSA:3.10.50.30 81 158 9.0E-27 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 PIRSF PIRSF006092 1 158 3.3E-50 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 1.0E-25 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 1.4E-28 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 SUPERFAMILY SSF54534 83 157 6.73E-22 T 11-10-2018 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 SUPERFAMILY SSF46557 5 79 3.92E-26 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 Gene3D G3DSA:1.10.287.180 4 77 5.0E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 156 3.3E-55 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AMC99_01081 de9b3d8cd70a868564660f57ce2f2564 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AMC99_00355 fc544d71d20432d9336ae14682f10f43 533 SUPERFAMILY SSF54862 149 410 2.51E-28 T 11-10-2018 AMC99_00355 fc544d71d20432d9336ae14682f10f43 533 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 406 530 1.8E-25 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain AMC99_00355 fc544d71d20432d9336ae14682f10f43 533 Gene3D G3DSA:2.60.40.10 408 528 1.3E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMC99_00355 fc544d71d20432d9336ae14682f10f43 533 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 315 326 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_00355 fc544d71d20432d9336ae14682f10f43 533 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 80 519 3.0E-160 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 AMC99_00355 fc544d71d20432d9336ae14682f10f43 533 Pfam PF13746 4Fe-4S dicluster domain 263 366 5.2E-40 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_00355 fc544d71d20432d9336ae14682f10f43 533 Pfam PF12801 4Fe-4S binding domain 140 177 7.7E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_02581 7c32bdd2ca6fa2f0888a0b749695a0ca 352 Pfam PF00107 Zinc-binding dehydrogenase 175 299 2.0E-33 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_02581 7c32bdd2ca6fa2f0888a0b749695a0ca 352 SMART SM00829 34 347 1.1E-58 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_02581 7c32bdd2ca6fa2f0888a0b749695a0ca 352 SUPERFAMILY SSF50129 25 158 5.78E-38 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_02581 7c32bdd2ca6fa2f0888a0b749695a0ca 352 Gene3D G3DSA:3.40.50.720 144 286 1.9E-109 T 11-10-2018 AMC99_02581 7c32bdd2ca6fa2f0888a0b749695a0ca 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 51 111 4.4E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_02581 7c32bdd2ca6fa2f0888a0b749695a0ca 352 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 25 349 4.4E-140 T 11-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 AMC99_02581 7c32bdd2ca6fa2f0888a0b749695a0ca 352 SUPERFAMILY SSF51735 135 312 1.73E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02581 7c32bdd2ca6fa2f0888a0b749695a0ca 352 Gene3D G3DSA:3.90.180.10 37 347 1.9E-109 T 11-10-2018 AMC99_01610 f2a994a13dce07fe95868f246b2feda7 294 Gene3D G3DSA:1.10.10.10 8 93 7.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01610 f2a994a13dce07fe95868f246b2feda7 294 Gene3D G3DSA:3.40.190.10 164 262 1.2E-28 T 11-10-2018 AMC99_01610 f2a994a13dce07fe95868f246b2feda7 294 Gene3D G3DSA:3.40.190.10 104 289 1.2E-28 T 11-10-2018 AMC99_01610 f2a994a13dce07fe95868f246b2feda7 294 Pfam PF03466 LysR substrate binding domain 96 291 1.5E-25 T 11-10-2018 IPR005119 LysR, substrate-binding AMC99_01610 f2a994a13dce07fe95868f246b2feda7 294 SUPERFAMILY SSF46785 5 86 9.98E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01610 f2a994a13dce07fe95868f246b2feda7 294 SUPERFAMILY SSF53850 96 292 1.81E-25 T 11-10-2018 AMC99_01610 f2a994a13dce07fe95868f246b2feda7 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 9.9E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 SUPERFAMILY SSF55874 218 399 6.68E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:1.20.120.160 1 138 1.6E-32 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 Pfam PF01627 Hpt domain 3 102 1.6E-13 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 SMART SM00387 258 401 1.3E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 SMART SM00260 393 534 9.1E-20 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 400 5.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 SUPERFAMILY SSF47226 1 122 1.96E-27 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:2.40.50.180 424 489 9.6E-27 T 11-10-2018 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:1.10.287.560 152 213 2.5E-5 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:2.30.30.40 401 530 9.6E-27 T 11-10-2018 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 SMART SM01231 152 213 3.4E-8 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 SUPERFAMILY SSF50341 400 532 1.44E-24 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 SUPERFAMILY SSF47384 153 214 7.45E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 Gene3D G3DSA:3.30.565.10 214 400 3.4E-56 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 9.6E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 379 9.6E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 398 9.6E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 355 9.6E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 Pfam PF01584 CheW-like domain 406 533 9.0E-19 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMC99_02067 00024a1e0d1e18b71b77b46c2f9b3294 787 SMART SM00073 1 98 7.8E-17 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMC99_01401 bd519cb02de97ef018a1bbed0cdcd099 251 Gene3D G3DSA:3.40.50.1820 2 248 3.3E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01401 bd519cb02de97ef018a1bbed0cdcd099 251 Pfam PF00561 alpha/beta hydrolase fold 24 122 9.6E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01401 bd519cb02de97ef018a1bbed0cdcd099 251 SUPERFAMILY SSF53474 3 249 7.05E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00209 11a1da87301d34c257818b8d7594bf9a 351 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 7 329 2.3E-124 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 AMC99_00209 11a1da87301d34c257818b8d7594bf9a 351 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 257 4.0E-53 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMC99_00209 11a1da87301d34c257818b8d7594bf9a 351 Gene3D G3DSA:3.40.50.720 7 257 1.8E-111 T 11-10-2018 AMC99_00209 11a1da87301d34c257818b8d7594bf9a 351 Gene3D G3DSA:3.90.25.10 177 311 1.8E-111 T 11-10-2018 AMC99_00209 11a1da87301d34c257818b8d7594bf9a 351 SUPERFAMILY SSF51735 1 327 1.59E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02700 dc43638730b77a0f3675d245af71e795 784 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 767 784 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AMC99_02700 dc43638730b77a0f3675d245af71e795 784 Pfam PF00593 TonB dependent receptor 288 783 2.3E-45 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02700 dc43638730b77a0f3675d245af71e795 784 Gene3D G3DSA:2.40.170.20 50 784 2.1E-156 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_02700 dc43638730b77a0f3675d245af71e795 784 SUPERFAMILY SSF56935 36 784 2.01E-129 T 11-10-2018 AMC99_02700 dc43638730b77a0f3675d245af71e795 784 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 167 2.2E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_02792 5b6d56efc1dbd7676f3890c5eece53cd 444 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 36 316 6.7E-50 T 11-10-2018 IPR018712 Domain of unknown function DUF2235 AMC99_02792 5b6d56efc1dbd7676f3890c5eece53cd 444 SUPERFAMILY SSF53474 83 153 1.29E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00734 407e3d561f13666104e8240e0ead6e61 390 Pfam PF03734 L,D-transpeptidase catalytic domain 165 310 2.0E-22 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMC99_00734 407e3d561f13666104e8240e0ead6e61 390 Gene3D G3DSA:2.40.440.10 106 327 3.5E-32 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_00734 407e3d561f13666104e8240e0ead6e61 390 SUPERFAMILY SSF141523 162 299 1.96E-19 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_01246 26473b7e4107aa7564de9821aa900ecb 487 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 471 2.3E-140 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMC99_01246 26473b7e4107aa7564de9821aa900ecb 487 Pfam PF00361 Proton-conducting membrane transporter 128 421 3.4E-77 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01246 26473b7e4107aa7564de9821aa900ecb 487 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 5 472 17.743 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AMC99_02643 8fe99dec1429d7a123a2854596399a7c 424 Pfam PF01595 Domain of unknown function DUF21 3 193 4.1E-43 T 11-10-2018 IPR002550 CNNM, transmembrane domain AMC99_02643 8fe99dec1429d7a123a2854596399a7c 424 Gene3D G3DSA:3.10.580.10 190 336 6.3E-39 T 11-10-2018 AMC99_02643 8fe99dec1429d7a123a2854596399a7c 424 SUPERFAMILY SSF54631 197 331 5.86E-24 T 11-10-2018 AMC99_02643 8fe99dec1429d7a123a2854596399a7c 424 Pfam PF00571 CBS domain 277 328 0.0023 T 11-10-2018 IPR000644 CBS domain AMC99_02643 8fe99dec1429d7a123a2854596399a7c 424 Pfam PF03471 Transporter associated domain 345 421 3.2E-16 T 11-10-2018 IPR005170 Transporter-associated domain AMC99_02643 8fe99dec1429d7a123a2854596399a7c 424 SUPERFAMILY SSF56176 342 421 6.54E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMC99_02643 8fe99dec1429d7a123a2854596399a7c 424 SMART SM01091 344 423 5.2E-23 T 11-10-2018 IPR005170 Transporter-associated domain AMC99_02643 8fe99dec1429d7a123a2854596399a7c 424 Gene3D G3DSA:3.30.465.10 337 422 3.8E-23 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMC99_00735 a6770d009a03ce59c3df98e649e3b3da 192 SUPERFAMILY SSF52540 1 141 5.32E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00735 a6770d009a03ce59c3df98e649e3b3da 192 Gene3D G3DSA:3.40.50.300 1 141 8.9E-24 T 11-10-2018 AMC99_00735 a6770d009a03ce59c3df98e649e3b3da 192 Pfam PF00265 Thymidine kinase 2 186 2.4E-49 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMC99_00735 a6770d009a03ce59c3df98e649e3b3da 192 PIRSF PIRSF035805 1 191 3.8E-55 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMC99_00735 a6770d009a03ce59c3df98e649e3b3da 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMC99_00735 a6770d009a03ce59c3df98e649e3b3da 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 33.58 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 AMC99_00735 a6770d009a03ce59c3df98e649e3b3da 192 SUPERFAMILY SSF57716 142 189 1.14E-15 T 11-10-2018 AMC99_00735 a6770d009a03ce59c3df98e649e3b3da 192 Gene3D G3DSA:3.30.60.20 143 188 6.6E-9 T 11-10-2018 AMC99_01903 541001479d62c697f1315541fac08f96 277 PIRSF PIRSF037208 3 252 4.0E-80 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AMC99_01903 541001479d62c697f1315541fac08f96 277 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 106 234 3.6E-29 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AMC99_01903 541001479d62c697f1315541fac08f96 277 SUPERFAMILY SSF55729 81 241 3.16E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01903 541001479d62c697f1315541fac08f96 277 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 17 86 1.0E-15 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 AMC99_01903 541001479d62c697f1315541fac08f96 277 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 240 38.759 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 SUPERFAMILY SSF53659 420 736 5.28E-73 T 11-10-2018 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 Gene3D G3DSA:3.40.50.720 152 432 3.8E-81 T 11-10-2018 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 Pfam PF03949 Malic enzyme, NAD binding domain 156 350 1.6E-20 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 SUPERFAMILY SSF53223 2 152 5.04E-51 T 11-10-2018 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 Pfam PF00390 Malic enzyme, N-terminal domain 10 142 9.0E-25 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 PIRSF PIRSF036684 1 739 0.0 T 11-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 ProSitePatterns PS00331 Malic enzymes signature. 150 166 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 Gene3D G3DSA:3.40.50.10380 1 151 2.3E-63 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 Gene3D G3DSA:3.40.50.10950 433 735 8.0E-74 T 11-10-2018 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 SMART SM01274 9 142 2.9E-78 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 Pfam PF01515 Phosphate acetyl/butaryl transferase 420 735 2.1E-73 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 SMART SM00919 154 389 2.3E-142 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 Gene3D G3DSA:3.40.50.10750 559 711 8.0E-74 T 11-10-2018 AMC99_02760 9cb9e9c068d488479847d04251fd5804 740 SUPERFAMILY SSF51735 154 440 1.06E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00919 4202c8da3c82a343739bc00b452ca8bd 510 Gene3D G3DSA:3.90.226.10 1 256 3.2E-94 T 11-10-2018 AMC99_00919 4202c8da3c82a343739bc00b452ca8bd 510 SUPERFAMILY SSF52096 3 249 1.85E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_00919 4202c8da3c82a343739bc00b452ca8bd 510 Gene3D G3DSA:3.90.226.10 257 510 2.6E-94 T 11-10-2018 AMC99_00919 4202c8da3c82a343739bc00b452ca8bd 510 SUPERFAMILY SSF52096 223 510 1.1E-88 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_00919 4202c8da3c82a343739bc00b452ca8bd 510 Pfam PF01039 Carboxyl transferase domain 27 508 2.5E-193 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 135 152 3.5E-80 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 339 357 3.5E-80 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 48 62 3.5E-80 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 221 242 3.5E-80 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 164 184 3.5E-80 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 117 133 3.5E-80 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 93 112 3.5E-80 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 299 318 3.5E-80 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PRINTS PR00681 Ribosomal protein S1 signature 30 48 3.5E-80 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 456 545 2.69E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 25 106 7.1E-17 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 278 368 2.4E-30 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 107 191 5.1E-5 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 199 286 1.65E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 457 540 4.2E-10 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 PIRSF PIRSF002111 2 546 4.8E-186 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 19 121 2.86E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 461 532 6.6E-14 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 28 96 6.2E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 284 356 3.4E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 112 180 3.6E-5 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 371 443 1.7E-17 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SMART SM00316 199 269 2.6E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 283 356 1.9E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 28 95 7.4E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 461 532 8.5E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 198 269 7.9E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 111 180 1.2E-9 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Pfam PF00575 S1 RNA binding domain 369 443 3.5E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 264 374 6.79E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 351 447 1.04E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 11 531 2.8E-184 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 SUPERFAMILY SSF50249 113 193 3.43E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 196 277 1.8E-27 T 11-10-2018 AMC99_01424 4184e5b752e170136fee0ed4f3f315cf 568 Gene3D G3DSA:2.40.50.140 369 451 5.3E-21 T 11-10-2018 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 SUPERFAMILY SSF56014 120 275 3.01E-45 T 11-10-2018 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 SUPERFAMILY SSF56014 401 541 5.63E-37 T 11-10-2018 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 409 541 1.7E-12 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 SUPERFAMILY SSF55124 1 126 1.06E-32 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 339 393 6.7E-12 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 109 1.3E-17 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 Gene3D G3DSA:3.30.413.10 401 542 3.6E-32 T 11-10-2018 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 5.7E-40 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 Gene3D G3DSA:3.30.413.10 119 307 3.5E-73 T 11-10-2018 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 Gene3D G3DSA:3.90.480.10 52 381 3.5E-73 T 11-10-2018 AMC99_01843 30c6e1a88b4201f238bcd4694d6b0aca 543 SUPERFAMILY SSF55124 251 415 3.27E-26 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 AMC99_00533 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 1 694 25.008 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMC99_00533 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 Pfam PF03030 Inorganic H+ pyrophosphatase 12 688 1.1E-254 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMC99_00533 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 5 694 8.3E-265 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMC99_00533 0dbce3e06a3dbdcaa4f5ff311ba287c7 700 PIRSF PIRSF001265 2 699 5.5E-242 T 11-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AMC99_01177 beae02cb70df8ce83067d37819fb6331 327 SUPERFAMILY SSF110997 259 324 9.29E-14 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMC99_01177 beae02cb70df8ce83067d37819fb6331 327 Gene3D G3DSA:3.30.70.1070 260 326 3.8E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMC99_01177 beae02cb70df8ce83067d37819fb6331 327 Pfam PF03330 Lytic transglycolase 80 140 2.0E-7 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMC99_01177 beae02cb70df8ce83067d37819fb6331 327 Pfam PF05036 Sporulation related domain 259 321 2.4E-13 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMC99_01177 beae02cb70df8ce83067d37819fb6331 327 Gene3D G3DSA:2.40.40.10 67 143 1.2E-13 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMC99_02329 2115e7c6bc5f03f56ae82fd180005697 243 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 39 224 1.0E-19 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AMC99_02329 2115e7c6bc5f03f56ae82fd180005697 243 SUPERFAMILY SSF56935 123 216 6.0E-5 T 11-10-2018 AMC99_02329 2115e7c6bc5f03f56ae82fd180005697 243 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 31 225 9.7E-35 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AMC99_02499 cb3a67557e0075cb0c5ba994d4159013 136 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.4E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMC99_02499 cb3a67557e0075cb0c5ba994d4159013 136 Pfam PF02082 Transcriptional regulator 1 83 1.5E-22 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMC99_02499 cb3a67557e0075cb0c5ba994d4159013 136 Gene3D G3DSA:1.10.10.10 1 135 4.3E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02499 cb3a67557e0075cb0c5ba994d4159013 136 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 127 2.4E-36 T 11-10-2018 IPR014290 SUF system FeS cluster assembly regulator AMC99_02499 cb3a67557e0075cb0c5ba994d4159013 136 SUPERFAMILY SSF46785 2 131 8.88E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02607 89c9afbd607fae5009c8be9197c33511 403 Pfam PF13579 Glycosyl transferase 4-like domain 21 181 1.4E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMC99_02607 89c9afbd607fae5009c8be9197c33511 403 SUPERFAMILY SSF53756 4 397 6.91E-31 T 11-10-2018 AMC99_02607 89c9afbd607fae5009c8be9197c33511 403 Gene3D G3DSA:3.40.50.2000 208 380 1.4E-11 T 11-10-2018 AMC99_02607 89c9afbd607fae5009c8be9197c33511 403 Gene3D G3DSA:3.40.50.2000 2 207 1.3E-12 T 11-10-2018 AMC99_00812 4fcfb8797bd83dfed4ced184072a7854 564 SMART SM00327 203 377 3.5E-28 T 11-10-2018 IPR002035 von Willebrand factor, type A AMC99_00812 4fcfb8797bd83dfed4ced184072a7854 564 Pfam PF12034 Domain of unknown function (DUF3520) 379 555 1.9E-60 T 11-10-2018 IPR021908 Protein of unknown function DUF3520 AMC99_00812 4fcfb8797bd83dfed4ced184072a7854 564 SUPERFAMILY SSF53300 200 374 3.01E-38 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMC99_00812 4fcfb8797bd83dfed4ced184072a7854 564 Pfam PF12450 von Willebrand factor 95 188 1.5E-35 T 11-10-2018 IPR022156 Uncharacterised protein YfbK, N-terminal AMC99_00812 4fcfb8797bd83dfed4ced184072a7854 564 Pfam PF00092 von Willebrand factor type A domain 205 366 4.1E-19 T 11-10-2018 IPR002035 von Willebrand factor, type A AMC99_00812 4fcfb8797bd83dfed4ced184072a7854 564 Gene3D G3DSA:3.40.50.410 197 380 6.8E-36 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMC99_02237 c6721a334052952c16b55777486ed4be 299 SUPERFAMILY SSF52540 52 295 6.84E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02237 c6721a334052952c16b55777486ed4be 299 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 51 290 2.1E-83 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMC99_02237 c6721a334052952c16b55777486ed4be 299 Hamap MF_02040 Iron-sulfur cluster carrier protein. 43 291 32.248 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AMC99_02237 c6721a334052952c16b55777486ed4be 299 Gene3D G3DSA:3.40.50.300 43 283 1.0E-72 T 11-10-2018 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 334 3.0E-175 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 Gene3D G3DSA:3.30.250.10 279 337 1.2E-24 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 Hamap MF_00268 Protein RecA [recA]. 16 340 52.248 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 254 283 1.8E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 104 133 1.8E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 138 167 1.8E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 176 205 1.8E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 221 249 1.8E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 PRINTS PR00142 RecA protein signature 308 325 1.8E-86 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 SUPERFAMILY SSF52540 16 278 3.77E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 Pfam PF00154 recA bacterial DNA recombination protein 18 279 1.6E-146 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 ProSitePatterns PS00321 recA signature. 224 232 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 SMART SM00382 68 239 1.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 Gene3D G3DSA:3.40.50.300 37 278 2.1E-84 T 11-10-2018 AMC99_01467 7fbc58d97316291c68bbe8a9a79bac2b 352 SUPERFAMILY SSF54752 279 335 3.66E-21 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AMC99_01585 fae5ea4edf8cd56c7192bff7d2d87a62 200 Pfam PF11967 Recombination protein O N terminal 1 74 1.6E-12 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AMC99_01585 fae5ea4edf8cd56c7192bff7d2d87a62 200 Pfam PF02565 Recombination protein O C terminal 88 148 7.0E-11 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AMC99_01585 fae5ea4edf8cd56c7192bff7d2d87a62 200 SUPERFAMILY SSF50249 2 66 7.54E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_02263 853d330199e6b0a0f7f364476bb7c997 310 SMART SM00829 1 308 1.8E-31 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_02263 853d330199e6b0a0f7f364476bb7c997 310 Gene3D G3DSA:3.40.50.720 109 254 1.2E-109 T 11-10-2018 AMC99_02263 853d330199e6b0a0f7f364476bb7c997 310 SUPERFAMILY SSF51735 97 250 4.38E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02263 853d330199e6b0a0f7f364476bb7c997 310 Pfam PF00107 Zinc-binding dehydrogenase 137 242 2.0E-26 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_02263 853d330199e6b0a0f7f364476bb7c997 310 Gene3D G3DSA:3.90.180.10 1 304 1.2E-109 T 11-10-2018 AMC99_02263 853d330199e6b0a0f7f364476bb7c997 310 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 15 72 7.5E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_02263 853d330199e6b0a0f7f364476bb7c997 310 SUPERFAMILY SSF50129 2 135 6.45E-33 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_02263 853d330199e6b0a0f7f364476bb7c997 310 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 126 147 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AMC99_02247 e7ff8c2b8eada97f432c46301088c1e1 201 SUPERFAMILY SSF53335 13 178 7.12E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02247 e7ff8c2b8eada97f432c46301088c1e1 201 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 10 199 2.6E-72 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AMC99_02247 e7ff8c2b8eada97f432c46301088c1e1 201 Pfam PF07021 Methionine biosynthesis protein MetW 10 199 1.9E-71 T 11-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 AMC99_02247 e7ff8c2b8eada97f432c46301088c1e1 201 Gene3D G3DSA:3.40.50.150 14 182 1.2E-24 T 11-10-2018 AMC99_00623 a299575e47cbc9feef07a65842db51ed 80 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 1 62 1.3E-23 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMC99_00623 a299575e47cbc9feef07a65842db51ed 80 SUPERFAMILY SSF50249 1 62 3.43E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00623 a299575e47cbc9feef07a65842db51ed 80 Gene3D G3DSA:2.40.50.140 1 62 3.2E-26 T 11-10-2018 AMC99_00623 a299575e47cbc9feef07a65842db51ed 80 Pfam PF01176 Translation initiation factor 1A / IF-1 1 62 2.3E-18 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AMC99_00623 a299575e47cbc9feef07a65842db51ed 80 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 64 18.872 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMC99_02746 19efdca2551666e550be2f4615f572e1 488 Gene3D G3DSA:3.10.105.10 260 455 6.9E-13 T 11-10-2018 AMC99_02746 19efdca2551666e550be2f4615f572e1 488 SUPERFAMILY SSF53850 26 480 2.17E-48 T 11-10-2018 AMC99_02746 19efdca2551666e550be2f4615f572e1 488 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 292 3.9E-20 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain AMC99_02746 19efdca2551666e550be2f4615f572e1 488 Gene3D G3DSA:3.40.190.10 32 243 9.4E-22 T 11-10-2018 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 227 379 5.4E-65 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 SUPERFAMILY SSF53448 10 220 1.6E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 220 6.2E-57 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 Gene3D G3DSA:3.30.1330.50 225 381 2.4E-68 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 220 3.7E-51 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 Gene3D G3DSA:3.90.550.10 7 223 3.5E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 Pfam PF02542 YgbB family 226 379 7.4E-64 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 226 381 34.797 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 260 275 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 8 382 42.228 T 11-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 AMC99_01193 07413b99e35c12f9dc49126476fbafe1 382 SUPERFAMILY SSF69765 226 380 1.83E-65 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 SUPERFAMILY SSF53187 3 373 2.02E-55 T 11-10-2018 AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 Gene3D G3DSA:3.40.630.10 8 364 1.1E-105 T 11-10-2018 AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 SUPERFAMILY SSF55031 184 284 4.64E-24 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 372 2.1E-114 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 140 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 377 46.241 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 Pfam PF01546 Peptidase family M20/M25/M40 73 373 5.1E-39 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 Gene3D G3DSA:3.30.70.360 184 295 1.1E-105 T 11-10-2018 AMC99_00227 7b1e2030d70f9c815a15a87570f1afca 379 Pfam PF07687 Peptidase dimerisation domain 180 286 8.6E-21 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMC99_00534 327ff2e2b040b5bc1bec0fdbbde084d3 248 Pfam PF00586 AIR synthase related protein, N-terminal domain 5 88 8.3E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AMC99_00534 327ff2e2b040b5bc1bec0fdbbde084d3 248 Gene3D G3DSA:3.90.650.10 96 248 4.4E-33 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMC99_00534 327ff2e2b040b5bc1bec0fdbbde084d3 248 SUPERFAMILY SSF56042 96 229 1.48E-23 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMC99_00534 327ff2e2b040b5bc1bec0fdbbde084d3 248 Pfam PF02769 AIR synthase related protein, C-terminal domain 101 208 1.1E-7 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMC99_00534 327ff2e2b040b5bc1bec0fdbbde084d3 248 SUPERFAMILY SSF55326 2 88 3.14E-20 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMC99_00534 327ff2e2b040b5bc1bec0fdbbde084d3 248 Gene3D G3DSA:3.30.1330.10 1 92 2.7E-21 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMC99_01364 ee16406bb85918720c406cd5d20ba2a6 251 Gene3D G3DSA:1.25.40.10 26 239 4.2E-56 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01364 ee16406bb85918720c406cd5d20ba2a6 251 Pfam PF13525 Outer membrane lipoprotein 27 218 2.0E-48 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like AMC99_01364 ee16406bb85918720c406cd5d20ba2a6 251 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 2 234 1.6E-82 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AMC99_01364 ee16406bb85918720c406cd5d20ba2a6 251 SUPERFAMILY SSF48452 26 145 8.71E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01364 ee16406bb85918720c406cd5d20ba2a6 251 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 228 32.174 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AMC99_02182 36bb834c8f97e3ca7fea76bb100f3a2f 323 Gene3D G3DSA:3.20.20.370 1 284 1.5E-20 T 11-10-2018 AMC99_02182 36bb834c8f97e3ca7fea76bb100f3a2f 323 SUPERFAMILY SSF88713 40 281 1.08E-14 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_02182 36bb834c8f97e3ca7fea76bb100f3a2f 323 Pfam PF01522 Polysaccharide deacetylase 2 166 1.4E-6 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_02271 1a127b1e3103fbba3eb62237790f7703 310 Pfam PF00085 Thioredoxin 12 110 2.8E-26 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMC99_02271 1a127b1e3103fbba3eb62237790f7703 310 Pfam PF14559 Tetratricopeptide repeat 147 198 5.0E-9 T 11-10-2018 AMC99_02271 1a127b1e3103fbba3eb62237790f7703 310 SUPERFAMILY SSF52833 18 112 7.05E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02271 1a127b1e3103fbba3eb62237790f7703 310 Pfam PF14561 Tetratricopeptide repeat 223 309 6.4E-25 T 11-10-2018 AMC99_02271 1a127b1e3103fbba3eb62237790f7703 310 SUPERFAMILY SSF48452 136 196 2.9E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02271 1a127b1e3103fbba3eb62237790f7703 310 ProSitePatterns PS00194 Thioredoxin family active site. 28 46 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMC99_02271 1a127b1e3103fbba3eb62237790f7703 310 Gene3D G3DSA:1.25.40.10 222 309 4.0E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02271 1a127b1e3103fbba3eb62237790f7703 310 Gene3D G3DSA:1.25.40.10 138 220 4.3E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02271 1a127b1e3103fbba3eb62237790f7703 310 Gene3D G3DSA:3.40.30.10 8 114 1.6E-28 T 11-10-2018 AMC99_02450 ad6d2866a6ea6a3f2c15e9e136f3fd9e 405 Gene3D G3DSA:3.40.630.10 21 385 4.0E-126 T 11-10-2018 AMC99_02450 ad6d2866a6ea6a3f2c15e9e136f3fd9e 405 Pfam PF01546 Peptidase family M20/M25/M40 82 395 7.2E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMC99_02450 ad6d2866a6ea6a3f2c15e9e136f3fd9e 405 Gene3D G3DSA:3.30.70.360 191 305 4.0E-126 T 11-10-2018 AMC99_02450 ad6d2866a6ea6a3f2c15e9e136f3fd9e 405 Pfam PF07687 Peptidase dimerisation domain 195 293 3.0E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMC99_02450 ad6d2866a6ea6a3f2c15e9e136f3fd9e 405 SUPERFAMILY SSF53187 8 401 1.1E-75 T 11-10-2018 AMC99_02450 ad6d2866a6ea6a3f2c15e9e136f3fd9e 405 SUPERFAMILY SSF55031 194 297 6.41E-28 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMC99_02450 ad6d2866a6ea6a3f2c15e9e136f3fd9e 405 PIRSF PIRSF005962 4 403 8.8E-109 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AMC99_02450 ad6d2866a6ea6a3f2c15e9e136f3fd9e 405 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 386 1.4E-98 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 AMC99_02485 455a6a13cf9f60649655a8c88fbac835 331 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 274 287 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMC99_02485 455a6a13cf9f60649655a8c88fbac835 331 SUPERFAMILY SSF53613 5 318 2.18E-80 T 11-10-2018 IPR029056 Ribokinase-like AMC99_02485 455a6a13cf9f60649655a8c88fbac835 331 Pfam PF00294 pfkB family carbohydrate kinase 56 318 4.8E-54 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AMC99_02485 455a6a13cf9f60649655a8c88fbac835 331 Gene3D G3DSA:3.40.1190.20 3 326 2.6E-90 T 11-10-2018 IPR029056 Ribokinase-like AMC99_02553 1552a3f927bdc1f4668fc06857cf5eac 258 PIRSF PIRSF009320 1 74 8.0E-16 T 11-10-2018 AMC99_02553 1552a3f927bdc1f4668fc06857cf5eac 258 PIRSF PIRSF009320 91 257 2.6E-7 T 11-10-2018 AMC99_02553 1552a3f927bdc1f4668fc06857cf5eac 258 SUPERFAMILY SSF52540 1 252 1.19E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02553 1552a3f927bdc1f4668fc06857cf5eac 258 Gene3D G3DSA:3.40.50.300 1 257 1.3E-74 T 11-10-2018 AMC99_02553 1552a3f927bdc1f4668fc06857cf5eac 258 Pfam PF13614 AAA domain 3 176 5.4E-58 T 11-10-2018 IPR025669 AAA domain AMC99_02420 9c74292818f7097179795ebb82e073bf 409 Gene3D G3DSA:3.30.390.30 324 409 6.5E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 1.2E-22 T 11-10-2018 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-22 T 11-10-2018 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.2E-22 T 11-10-2018 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.2E-22 T 11-10-2018 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 304 2.1E-59 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.0E-22 T 11-10-2018 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.0E-22 T 11-10-2018 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.0E-22 T 11-10-2018 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 2.0E-22 T 11-10-2018 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.0E-22 T 11-10-2018 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 SUPERFAMILY SSF51905 1 314 8.43E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02420 9c74292818f7097179795ebb82e073bf 409 SUPERFAMILY SSF55424 317 409 2.88E-28 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AMC99_02420 9c74292818f7097179795ebb82e073bf 409 Gene3D G3DSA:3.50.50.60 6 313 8.8E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02420 9c74292818f7097179795ebb82e073bf 409 Pfam PF14759 Reductase C-terminal 324 409 2.3E-29 T 11-10-2018 IPR028202 Reductase, C-terminal AMC99_02420 9c74292818f7097179795ebb82e073bf 409 Gene3D G3DSA:3.50.50.60 115 241 8.8E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00190 324599a9c8554870b2e5c6fb45c53e3c 475 Gene3D G3DSA:2.20.200.10 97 355 9.9E-88 T 11-10-2018 AMC99_00190 324599a9c8554870b2e5c6fb45c53e3c 475 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 54 465 6.2E-72 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AMC99_00190 324599a9c8554870b2e5c6fb45c53e3c 475 Pfam PF02321 Outer membrane efflux protein 66 239 2.8E-16 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_00190 324599a9c8554870b2e5c6fb45c53e3c 475 Pfam PF02321 Outer membrane efflux protein 279 459 1.1E-18 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_00190 324599a9c8554870b2e5c6fb45c53e3c 475 SUPERFAMILY SSF56954 3 466 7.46E-75 T 11-10-2018 AMC99_00190 324599a9c8554870b2e5c6fb45c53e3c 475 Gene3D G3DSA:1.20.1600.10 56 465 9.9E-88 T 11-10-2018 AMC99_01230 d63136b109b0ce0aab4e071277ba6a20 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 156 35.579 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01230 d63136b109b0ce0aab4e071277ba6a20 159 Pfam PF01967 MoaC family 15 148 6.4E-54 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01230 d63136b109b0ce0aab4e071277ba6a20 159 SUPERFAMILY SSF55040 11 153 2.22E-58 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01230 d63136b109b0ce0aab4e071277ba6a20 159 Gene3D G3DSA:3.30.70.640 1 159 1.1E-66 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01230 d63136b109b0ce0aab4e071277ba6a20 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 150 2.4E-63 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00939 7f7edf59aead1c23a20229274697bc27 125 Gene3D G3DSA:3.90.79.10 1 122 7.8E-27 T 11-10-2018 AMC99_00939 7f7edf59aead1c23a20229274697bc27 125 ProSitePatterns PS00893 Nudix box signature. 27 48 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMC99_00939 7f7edf59aead1c23a20229274697bc27 125 Pfam PF00293 NUDIX domain 2 106 2.1E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_00939 7f7edf59aead1c23a20229274697bc27 125 SUPERFAMILY SSF55811 2 120 5.01E-26 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMC99_00939 7f7edf59aead1c23a20229274697bc27 125 PRINTS PR00502 NUDIX hydrolase family signature 22 36 2.1E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMC99_00939 7f7edf59aead1c23a20229274697bc27 125 PRINTS PR00502 NUDIX hydrolase family signature 36 51 2.1E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMC99_01724 abd34c50d8f0cf3253be2bd2055206c3 82 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 74 3.6E-28 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01724 abd34c50d8f0cf3253be2bd2055206c3 82 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 74 5.0E-25 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01724 abd34c50d8f0cf3253be2bd2055206c3 82 SUPERFAMILY SSF82697 1 74 1.92E-25 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_01724 abd34c50d8f0cf3253be2bd2055206c3 82 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 74 1.8E-26 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01724 abd34c50d8f0cf3253be2bd2055206c3 82 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 75 20.979 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AMC99_01724 abd34c50d8f0cf3253be2bd2055206c3 82 Gene3D G3DSA:3.30.1280.10 1 78 5.3E-28 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_01539 f283d4da00f341484df458225c595699 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.4E-49 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMC99_01539 f283d4da00f341484df458225c595699 144 SUPERFAMILY SSF54686 1 134 9.81E-56 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_01539 f283d4da00f341484df458225c595699 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01539 f283d4da00f341484df458225c595699 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.7E-56 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01539 f283d4da00f341484df458225c595699 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01539 f283d4da00f341484df458225c595699 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01539 f283d4da00f341484df458225c595699 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01539 f283d4da00f341484df458225c595699 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.7E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01539 f283d4da00f341484df458225c595699 144 Gene3D G3DSA:3.90.1170.10 1 140 1.3E-55 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_01539 f283d4da00f341484df458225c595699 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.69 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01354 de8e57b6f2d9e97b61d3538dbe7b53ee 133 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 119 1.4E-26 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AMC99_01354 de8e57b6f2d9e97b61d3538dbe7b53ee 133 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 108 4.3E-16 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01354 de8e57b6f2d9e97b61d3538dbe7b53ee 133 Gene3D G3DSA:1.20.1300.10 11 122 1.9E-26 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01354 de8e57b6f2d9e97b61d3538dbe7b53ee 133 SUPERFAMILY SSF81343 11 122 5.23E-27 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_02313 c78dbbc703aaa0aabe32ac444e4ca9c2 266 Pfam PF06966 Protein of unknown function (DUF1295) 20 256 1.5E-66 T 11-10-2018 IPR010721 Protein of unknown function DUF1295 AMC99_02313 c78dbbc703aaa0aabe32ac444e4ca9c2 266 Gene3D G3DSA:1.20.120.1630 55 262 4.9E-16 T 11-10-2018 AMC99_01016 474d23db9693d126748d92177903f4b2 414 SUPERFAMILY SSF47781 308 382 4.45E-9 T 11-10-2018 IPR010994 RuvA domain 2-like AMC99_01016 474d23db9693d126748d92177903f4b2 414 Gene3D G3DSA:3.20.20.70 54 175 1.2E-10 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01016 474d23db9693d126748d92177903f4b2 414 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 8 403 6.9E-174 T 11-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative AMC99_01016 474d23db9693d126748d92177903f4b2 414 SMART SM00729 59 286 0.0078 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_01016 474d23db9693d126748d92177903f4b2 414 SUPERFAMILY SSF102114 48 199 3.14E-16 T 11-10-2018 AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 Pfam PF01590 GAF domain 14 138 1.0E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 Pfam PF07536 HWE histidine kinase 289 371 8.4E-15 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 SMART SM00911 289 372 4.2E-20 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 SMART SM00086 234 276 2.0E-8 T 11-10-2018 IPR001610 PAC motif AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 158 281 1.7E-14 T 11-10-2018 IPR000014 PAS domain AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 SUPERFAMILY SSF55874 354 472 5.16E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 SMART SM00065 10 154 0.0029 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 Gene3D G3DSA:3.30.450.20 155 272 2.6E-29 T 11-10-2018 AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 SUPERFAMILY SSF55781 14 148 1.49E-21 T 11-10-2018 AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 SMART SM00091 162 228 6.3E-5 T 11-10-2018 IPR000014 PAS domain AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 SUPERFAMILY SSF55785 152 273 2.62E-24 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 Pfam PF08447 PAS fold 185 270 1.0E-16 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 Gene3D G3DSA:3.30.450.40 7 153 2.5E-13 T 11-10-2018 IPR029016 GAF-like domain superfamily AMC99_02319 aad9bb4d912873087f67e5c448dfb809 480 Gene3D G3DSA:3.30.565.10 345 479 3.9E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 221 235 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 187 208 4.1E-51 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 4.1E-51 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 140 163 4.1E-51 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 218 242 4.1E-51 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 4.1E-51 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 4.1E-51 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 Gene3D G3DSA:3.40.190.80 151 270 2.0E-34 T 11-10-2018 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 Pfam PF00459 Inositol monophosphatase family 10 270 1.4E-56 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 Gene3D G3DSA:3.30.540.10 2 149 1.8E-45 T 11-10-2018 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 208 220 3.2E-20 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 20 42 3.2E-20 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 166 192 3.2E-20 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 PRINTS PR01959 SuhB family inositol monophosphatase signature 114 133 3.2E-20 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 AMC99_00995 bfe4cb63e8bc79259ce21cd4eae30b94 272 SUPERFAMILY SSF56655 7 268 1.03E-77 T 11-10-2018 AMC99_00789 8209fd8a857c8511d1a8d998b08615df 430 SUPERFAMILY SSF56935 30 430 3.89E-51 T 11-10-2018 AMC99_00789 8209fd8a857c8511d1a8d998b08615df 430 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 34 424 1.9E-28 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMC99_00789 8209fd8a857c8511d1a8d998b08615df 430 Gene3D G3DSA:2.40.160.60 28 430 1.7E-74 T 11-10-2018 AMC99_02740 3f37c8d6efa5dd1b3b8c9ad8b19ae0e8 153 SUPERFAMILY SSF55298 1 150 5.18E-56 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMC99_02740 3f37c8d6efa5dd1b3b8c9ad8b19ae0e8 153 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 4 144 5.7E-38 T 11-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMC99_02740 3f37c8d6efa5dd1b3b8c9ad8b19ae0e8 153 Gene3D G3DSA:3.30.1330.40 1 149 1.1E-62 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMC99_01840 421f08a9e92bd59a4fce0aa2ae528e3c 355 SUPERFAMILY SSF82689 234 334 1.03E-29 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_01840 421f08a9e92bd59a4fce0aa2ae528e3c 355 Gene3D G3DSA:2.30.30.60 177 230 2.8E-5 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMC99_01840 421f08a9e92bd59a4fce0aa2ae528e3c 355 SUPERFAMILY SSF50182 161 231 1.28E-10 T 11-10-2018 IPR010920 LSM domain superfamily AMC99_01840 421f08a9e92bd59a4fce0aa2ae528e3c 355 Pfam PF00924 Mechanosensitive ion channel 118 323 1.9E-47 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_01840 421f08a9e92bd59a4fce0aa2ae528e3c 355 SUPERFAMILY SSF82861 79 159 1.2E-11 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMC99_01840 421f08a9e92bd59a4fce0aa2ae528e3c 355 Gene3D G3DSA:3.30.70.100 233 327 3.5E-25 T 11-10-2018 AMC99_00280 2dba0be8f1293ebee4a10374c71f9988 381 SUPERFAMILY SSF51395 25 121 2.31E-9 T 11-10-2018 AMC99_00280 2dba0be8f1293ebee4a10374c71f9988 381 Pfam PF04551 GcpE protein 16 357 1.2E-131 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMC99_00280 2dba0be8f1293ebee4a10374c71f9988 381 Gene3D G3DSA:3.20.20.20 3 264 9.2E-103 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_00280 2dba0be8f1293ebee4a10374c71f9988 381 PIRSF PIRSF004640 4 366 2.3E-146 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMC99_00280 2dba0be8f1293ebee4a10374c71f9988 381 SUPERFAMILY SSF56014 270 354 8.97E-15 T 11-10-2018 AMC99_00280 2dba0be8f1293ebee4a10374c71f9988 381 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 10 361 33.422 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMC99_00280 2dba0be8f1293ebee4a10374c71f9988 381 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 12 357 2.3E-137 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AMC99_00280 2dba0be8f1293ebee4a10374c71f9988 381 Gene3D G3DSA:3.30.413.10 265 364 2.0E-26 T 11-10-2018 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 SUPERFAMILY SSF55307 207 323 4.12E-44 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 377 37.826 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 Gene3D G3DSA:3.40.50.1440 7 223 1.0E-79 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 SUPERFAMILY SSF52490 15 211 2.35E-68 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 Pfam PF12327 FtsZ family, C-terminal domain 225 320 1.4E-36 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 SMART SM00864 16 208 4.5E-105 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 Gene3D G3DSA:3.30.1330.20 224 333 1.8E-37 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 PRINTS PR00423 Cell division protein FtsZ signature 192 214 4.1E-50 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 PRINTS PR00423 Cell division protein FtsZ signature 215 236 4.1E-50 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 PRINTS PR00423 Cell division protein FtsZ signature 101 121 4.1E-50 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 PRINTS PR00423 Cell division protein FtsZ signature 129 150 4.1E-50 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 175 9.7E-41 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 SMART SM00865 210 328 2.5E-57 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AMC99_01858 2abded335a212f6633bc8d58cb74a828 577 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 330 6.7E-125 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AMC99_00636 4a7a72d2b60e99416cc564292efccb77 376 Gene3D G3DSA:3.30.70.270 184 355 1.9E-48 T 11-10-2018 AMC99_00636 4a7a72d2b60e99416cc564292efccb77 376 SUPERFAMILY SSF55073 195 348 2.51E-43 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_00636 4a7a72d2b60e99416cc564292efccb77 376 SMART SM00267 179 350 1.4E-43 T 11-10-2018 IPR000160 GGDEF domain AMC99_00636 4a7a72d2b60e99416cc564292efccb77 376 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 346 3.1E-39 T 11-10-2018 IPR000160 GGDEF domain AMC99_00636 4a7a72d2b60e99416cc564292efccb77 376 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 350 1.8E-42 T 11-10-2018 IPR000160 GGDEF domain AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 SUPERFAMILY SSF50129 1 94 1.88E-35 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 SMART SM00883 2 94 2.9E-60 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 Gene3D G3DSA:2.30.33.40 1 95 4.1E-40 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.006 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 4.2E-35 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.2E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.2E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.2E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_02794 9297b133571b9e2ad08508c6ec549ed6 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.2E-33 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMC99_02388 2c5735eb6f11ebc0cfa47324503f66a5 342 SUPERFAMILY SSF52540 15 190 7.73E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02388 2c5735eb6f11ebc0cfa47324503f66a5 342 SUPERFAMILY SSF48019 215 335 5.27E-11 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMC99_02388 2c5735eb6f11ebc0cfa47324503f66a5 342 Gene3D G3DSA:1.20.272.10 211 339 5.7E-6 T 11-10-2018 AMC99_02772 37b445cb0c72bcec4ed64eed3be03bc4 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.347 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMC99_02772 37b445cb0c72bcec4ed64eed3be03bc4 175 Gene3D G3DSA:3.90.80.10 1 175 3.4E-67 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMC99_02772 37b445cb0c72bcec4ed64eed3be03bc4 175 SUPERFAMILY SSF50324 4 174 3.92E-66 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMC99_02772 37b445cb0c72bcec4ed64eed3be03bc4 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMC99_02772 37b445cb0c72bcec4ed64eed3be03bc4 175 Pfam PF00719 Inorganic pyrophosphatase 18 174 1.3E-53 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMC99_01348 2daef44bbd38f0a0d3be16f99955ccae 533 Pfam PF05569 BlaR1 peptidase M56 7 277 2.0E-34 T 11-10-2018 IPR008756 Peptidase M56 AMC99_00791 72513592a3a359f00e4ca36630877518 248 Gene3D G3DSA:3.30.70.20 1 233 7.7E-65 T 11-10-2018 AMC99_00791 72513592a3a359f00e4ca36630877518 248 Pfam PF13247 4Fe-4S dicluster domain 76 176 2.0E-25 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_00791 72513592a3a359f00e4ca36630877518 248 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 115 126 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_00791 72513592a3a359f00e4ca36630877518 248 SUPERFAMILY SSF54862 11 213 3.77E-63 T 11-10-2018 AMC99_00267 ce299458dd9788701e9474c097c43a10 347 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 327 3.2E-132 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMC99_00267 ce299458dd9788701e9474c097c43a10 347 Gene3D G3DSA:1.10.8.60 183 257 4.6E-29 T 11-10-2018 AMC99_00267 ce299458dd9788701e9474c097c43a10 347 SUPERFAMILY SSF46785 257 331 8.94E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00267 ce299458dd9788701e9474c097c43a10 347 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 6.4E-30 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMC99_00267 ce299458dd9788701e9474c097c43a10 347 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 326 6.0E-31 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMC99_00267 ce299458dd9788701e9474c097c43a10 347 SMART SM00382 52 179 2.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00267 ce299458dd9788701e9474c097c43a10 347 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 236 2.0E-111 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMC99_00267 ce299458dd9788701e9474c097c43a10 347 Gene3D G3DSA:3.40.50.300 19 182 1.5E-39 T 11-10-2018 AMC99_00267 ce299458dd9788701e9474c097c43a10 347 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 347 164.765 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMC99_00267 ce299458dd9788701e9474c097c43a10 347 SUPERFAMILY SSF52540 21 251 2.55E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00267 ce299458dd9788701e9474c097c43a10 347 Gene3D G3DSA:1.10.10.10 258 335 8.8E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 PRINTS PR00108 Thymidylate synthase family signature 171 190 4.8E-38 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 PRINTS PR00108 Thymidylate synthase family signature 61 82 4.8E-38 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 PRINTS PR00108 Thymidylate synthase family signature 219 245 4.8E-38 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 PRINTS PR00108 Thymidylate synthase family signature 257 274 4.8E-38 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 PRINTS PR00108 Thymidylate synthase family signature 197 212 4.8E-38 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 Gene3D G3DSA:3.30.572.10 4 324 1.8E-116 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 Pfam PF00303 Thymidylate synthase 21 324 2.8E-103 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 SUPERFAMILY SSF55831 11 324 8.37E-111 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 Hamap MF_00008 Thymidylate synthase [thyA]. 19 324 38.625 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 ProSitePatterns PS00091 Thymidylate synthase active site. 182 210 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00973 163bef8f25e375dab4f6b9f81c716602 324 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 21 324 1.2E-99 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 AMC99_00942 f121b409f84bd2fdbe06acd8d2ce82fb 511 SUPERFAMILY SSF56024 21 235 1.22E-26 T 11-10-2018 AMC99_00942 f121b409f84bd2fdbe06acd8d2ce82fb 511 Gene3D G3DSA:3.30.870.10 259 414 1.4E-17 T 11-10-2018 AMC99_00942 f121b409f84bd2fdbe06acd8d2ce82fb 511 SMART SM00155 141 168 7.3 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMC99_00942 f121b409f84bd2fdbe06acd8d2ce82fb 511 SMART SM00155 355 382 3.9E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMC99_00942 f121b409f84bd2fdbe06acd8d2ce82fb 511 SUPERFAMILY SSF56024 264 394 2.51E-22 T 11-10-2018 AMC99_00942 f121b409f84bd2fdbe06acd8d2ce82fb 511 Gene3D G3DSA:3.30.870.10 17 233 1.1E-19 T 11-10-2018 AMC99_00942 f121b409f84bd2fdbe06acd8d2ce82fb 511 Pfam PF13091 PLD-like domain 272 397 1.2E-11 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMC99_01475 a7b167ac7d8eb98a6f2e8231ad5d18e3 221 Gene3D G3DSA:2.40.160.20 34 221 1.9E-20 T 11-10-2018 AMC99_01475 a7b167ac7d8eb98a6f2e8231ad5d18e3 221 Pfam PF13505 Outer membrane protein beta-barrel domain 14 221 5.2E-26 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel AMC99_01475 a7b167ac7d8eb98a6f2e8231ad5d18e3 221 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 144 194 0.001 T 11-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 AMC99_01475 a7b167ac7d8eb98a6f2e8231ad5d18e3 221 SUPERFAMILY SSF56925 38 221 1.18E-26 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMC99_00710 cb0f77643af3e2c88dfaef7de4dda971 214 Pfam PF04279 Intracellular septation protein A 14 196 3.5E-46 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AMC99_00710 cb0f77643af3e2c88dfaef7de4dda971 214 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 12 199 16.075 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 AMC99_02474 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 283 1.9E-82 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AMC99_02474 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 119 282 1.1E-49 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AMC99_02474 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 SUPERFAMILY SSF51690 119 283 1.92E-53 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AMC99_02474 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 PIRSF PIRSF006250 6 285 3.1E-82 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AMC99_02474 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 Gene3D G3DSA:3.20.20.70 128 273 5.7E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02474 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 Gene3D G3DSA:3.90.1170.20 10 281 5.7E-94 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AMC99_02474 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 SUPERFAMILY SSF54675 4 118 4.71E-26 T 11-10-2018 AMC99_02474 cbf1b5f8ac2bfcdf422fe6d299e12e10 286 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 29 117 2.1E-21 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AMC99_01398 ad9a04d6922cfd5a5f3ce0f821c377a7 154 SUPERFAMILY SSF50630 10 142 1.0E-41 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMC99_01398 ad9a04d6922cfd5a5f3ce0f821c377a7 154 Pfam PF05618 Putative ATP-dependant zinc protease 10 143 2.1E-31 T 11-10-2018 AMC99_01398 ad9a04d6922cfd5a5f3ce0f821c377a7 154 Gene3D G3DSA:2.40.70.10 8 135 1.3E-33 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMC99_02155 95de3c20f78b40746d819e64cd3f0ce1 375 Pfam PF13533 Biotin-lipoyl like 65 113 2.7E-9 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMC99_02155 95de3c20f78b40746d819e64cd3f0ce1 375 Gene3D G3DSA:2.40.30.170 246 366 4.3E-36 T 11-10-2018 AMC99_02155 95de3c20f78b40746d819e64cd3f0ce1 375 SUPERFAMILY SSF111369 192 282 5.75E-10 T 11-10-2018 AMC99_02155 95de3c20f78b40746d819e64cd3f0ce1 375 Gene3D G3DSA:2.40.50.100 64 98 2.3E-9 T 11-10-2018 AMC99_02155 95de3c20f78b40746d819e64cd3f0ce1 375 Gene3D G3DSA:1.10.287.470 129 198 1.4E-9 T 11-10-2018 AMC99_02155 95de3c20f78b40746d819e64cd3f0ce1 375 Pfam PF13437 HlyD family secretion protein 232 350 9.5E-17 T 11-10-2018 AMC99_02155 95de3c20f78b40746d819e64cd3f0ce1 375 SUPERFAMILY SSF111369 61 140 1.03E-6 T 11-10-2018 AMC99_02155 95de3c20f78b40746d819e64cd3f0ce1 375 Gene3D G3DSA:1.10.287.470 99 127 2.3E-9 T 11-10-2018 AMC99_01060 98597175011deaf72aa88140329e7b46 343 Pfam PF02547 Queuosine biosynthesis protein 4 341 8.0E-124 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMC99_01060 98597175011deaf72aa88140329e7b46 343 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 5.9E-115 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMC99_01060 98597175011deaf72aa88140329e7b46 343 Gene3D G3DSA:3.40.1780.10 1 68 2.0E-15 T 11-10-2018 AMC99_01060 98597175011deaf72aa88140329e7b46 343 Gene3D G3DSA:3.40.1780.10 159 342 6.6E-75 T 11-10-2018 AMC99_01060 98597175011deaf72aa88140329e7b46 343 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 43.947 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMC99_01060 98597175011deaf72aa88140329e7b46 343 SUPERFAMILY SSF111337 1 342 9.29E-127 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 AMC99_01060 98597175011deaf72aa88140329e7b46 343 Gene3D G3DSA:2.40.10.240 69 158 3.2E-18 T 11-10-2018 AMC99_02159 bd0092e0777f049d2e45ffcb65465cb7 979 SUPERFAMILY SSF52540 589 915 3.98E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02159 bd0092e0777f049d2e45ffcb65465cb7 979 Gene3D G3DSA:2.30.30.940 799 862 3.4E-10 T 11-10-2018 AMC99_02159 bd0092e0777f049d2e45ffcb65465cb7 979 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 281 5.2E-78 T 11-10-2018 IPR014059 Conjugative relaxase, N-terminal AMC99_02159 bd0092e0777f049d2e45ffcb65465cb7 979 Pfam PF13604 AAA domain 459 656 2.4E-43 T 11-10-2018 AMC99_02159 bd0092e0777f049d2e45ffcb65465cb7 979 Pfam PF08751 TrwC relaxase 11 275 1.2E-76 T 11-10-2018 IPR014862 TrwC relaxase AMC99_02159 bd0092e0777f049d2e45ffcb65465cb7 979 SUPERFAMILY SSF55464 1 294 5.49E-83 T 11-10-2018 AMC99_02159 bd0092e0777f049d2e45ffcb65465cb7 979 Gene3D G3DSA:3.40.50.300 863 912 3.4E-10 T 11-10-2018 AMC99_02159 bd0092e0777f049d2e45ffcb65465cb7 979 Gene3D G3DSA:3.40.50.300 439 644 1.1E-31 T 11-10-2018 AMC99_02159 bd0092e0777f049d2e45ffcb65465cb7 979 SUPERFAMILY SSF52540 455 607 1.32E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01041 805b96423a28db7a3b45997eee1f0bfd 144 SUPERFAMILY SSF54637 23 125 4.79E-26 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_01041 805b96423a28db7a3b45997eee1f0bfd 144 Gene3D G3DSA:3.10.129.10 1 130 7.4E-30 T 11-10-2018 AMC99_01041 805b96423a28db7a3b45997eee1f0bfd 144 Pfam PF03061 Thioesterase superfamily 43 119 5.0E-14 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_01041 805b96423a28db7a3b45997eee1f0bfd 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 12 126 8.3E-13 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 SMART SM00411 8 97 6.3E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 SUPERFAMILY SSF47729 8 97 3.09E-26 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 PRINTS PR01727 Prokaryotic integration host factor signature 47 62 6.6E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 PRINTS PR01727 Prokaryotic integration host factor signature 65 78 6.6E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 PRINTS PR01727 Prokaryotic integration host factor signature 81 95 6.6E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 Pfam PF00216 Bacterial DNA-binding protein 8 96 4.1E-25 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 7 98 3.1E-38 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 53 72 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 Gene3D G3DSA:4.10.520.10 6 99 2.7E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMC99_01633 af7bf207b2adf177e6fe7948f89c455b 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 6 99 26.675 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 AMC99_01477 79851bbeca8cf811e5813e6d77f02362 198 Gene3D G3DSA:3.40.50.150 1 197 1.2E-55 T 11-10-2018 AMC99_01477 79851bbeca8cf811e5813e6d77f02362 198 SUPERFAMILY SSF53335 9 182 2.41E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01477 79851bbeca8cf811e5813e6d77f02362 198 Pfam PF13649 Methyltransferase domain 42 130 1.3E-12 T 11-10-2018 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 SMART SM00382 201 340 1.7E-24 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 SUPERFAMILY SSF140990 419 616 7.06E-70 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 Gene3D G3DSA:1.20.58.760 414 619 8.1E-74 T 11-10-2018 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 SUPERFAMILY SSF52540 159 408 3.87E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 117 609 7.8E-231 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 Pfam PF06480 FtsH Extracellular 23 108 6.3E-10 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 19 616 36.909 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 337 4.2E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 Gene3D G3DSA:1.10.8.60 340 413 5.9E-30 T 11-10-2018 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 ProSitePatterns PS00674 AAA-protein family signature. 308 326 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 Gene3D G3DSA:3.40.50.300 153 339 3.5E-69 T 11-10-2018 AMC99_00195 34b62e526f35fddec4e6586aee63095e 652 Pfam PF01434 Peptidase family M41 399 608 4.7E-78 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 SUPERFAMILY SSF56024 510 690 6.8E-63 T 11-10-2018 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 Pfam PF13089 Polyphosphate kinase N-terminal domain 21 125 1.3E-36 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 PIRSF PIRSF015589 2 702 1.9E-255 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 Gene3D G3DSA:3.30.1840.10 15 319 5.6E-91 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 Pfam PF02503 Polyphosphate kinase middle domain 138 329 3.9E-51 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 SUPERFAMILY SSF140356 18 115 3.92E-36 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 Hamap MF_00347 Polyphosphate kinase [ppk]. 18 695 26.656 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 Gene3D G3DSA:3.30.870.10 513 694 2.3E-60 T 11-10-2018 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 Gene3D G3DSA:3.30.870.10 327 508 3.1E-70 T 11-10-2018 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 21 692 2.1E-274 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 Pfam PF13090 Polyphosphate kinase C-terminal domain 339 690 5.2E-147 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 SUPERFAMILY SSF143724 123 321 1.43E-51 T 11-10-2018 AMC99_01715 f4244b64e585470d09ad4aa44f036ec8 718 SUPERFAMILY SSF56024 327 502 9.42E-55 T 11-10-2018 AMC99_01657 395c882f1645a104d823c30c069b9190 345 Gene3D G3DSA:1.10.10.10 262 345 4.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01657 395c882f1645a104d823c30c069b9190 345 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 264 343 1.2E-31 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMC99_01657 395c882f1645a104d823c30c069b9190 345 SUPERFAMILY SSF46689 94 128 6.72E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01657 395c882f1645a104d823c30c069b9190 345 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 313 319 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMC99_01657 395c882f1645a104d823c30c069b9190 345 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 186 259 7.8E-5 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMC99_01657 395c882f1645a104d823c30c069b9190 345 Gene3D G3DSA:1.10.10.60 81 176 2.1E-17 T 11-10-2018 AMC99_01657 395c882f1645a104d823c30c069b9190 345 Gene3D G3DSA:3.40.10.10 1 75 1.1E-29 T 11-10-2018 IPR035451 Ada-like domain superfamily AMC99_01657 395c882f1645a104d823c30c069b9190 345 SUPERFAMILY SSF46767 262 343 1.44E-30 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 AMC99_01657 395c882f1645a104d823c30c069b9190 345 PIRSF PIRSF000409 1 345 4.8E-124 T 11-10-2018 IPR016221 Bifunctional regulatory protein Ada AMC99_01657 395c882f1645a104d823c30c069b9190 345 Gene3D G3DSA:3.30.160.70 177 261 1.2E-22 T 11-10-2018 AMC99_01657 395c882f1645a104d823c30c069b9190 345 Pfam PF12833 Helix-turn-helix domain 102 179 2.3E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_01657 395c882f1645a104d823c30c069b9190 345 Pfam PF02805 Metal binding domain of Ada 11 74 4.3E-29 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 AMC99_01657 395c882f1645a104d823c30c069b9190 345 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 263 342 3.6E-33 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 AMC99_01657 395c882f1645a104d823c30c069b9190 345 SUPERFAMILY SSF53155 185 260 2.55E-17 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 AMC99_01657 395c882f1645a104d823c30c069b9190 345 SMART SM00342 96 178 2.1E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_01657 395c882f1645a104d823c30c069b9190 345 SUPERFAMILY SSF57884 5 76 1.44E-28 T 11-10-2018 IPR035451 Ada-like domain superfamily AMC99_02216 65cfb51b039a1ae57ef639b10fc717a8 435 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 195 432 1.6E-75 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 AMC99_02216 65cfb51b039a1ae57ef639b10fc717a8 435 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 80 6.7E-21 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 AMC99_01498 2b001aaa8e5b4d3fb26da98487418ed2 734 Gene3D G3DSA:1.10.1370.40 77 722 2.4E-226 T 11-10-2018 AMC99_01498 2b001aaa8e5b4d3fb26da98487418ed2 734 SUPERFAMILY SSF55486 56 726 2.93E-162 T 11-10-2018 AMC99_01498 2b001aaa8e5b4d3fb26da98487418ed2 734 Gene3D G3DSA:1.10.1370.10 188 660 2.4E-226 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMC99_01498 2b001aaa8e5b4d3fb26da98487418ed2 734 Pfam PF01432 Peptidase family M3 275 725 2.5E-118 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 Gene3D G3DSA:3.30.66.10 5 83 3.4E-27 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 226 240 1.9E-7 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 270 281 1.9E-7 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 117 136 1.9E-7 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 140 154 1.9E-7 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 Gene3D G3DSA:3.90.15.10 108 227 4.0E-74 T 11-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 SUPERFAMILY SSF55869 17 78 8.11E-19 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 Gene3D G3DSA:1.10.132.120 85 311 4.0E-74 T 11-10-2018 AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 SUPERFAMILY SSF56349 73 309 3.06E-60 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_01594 548c79b50a046efcf9cc551d289f09fa 327 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 77 246 5.5E-25 T 11-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 712 1.4E-61 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 794 1.4E-61 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 891 904 1.4E-61 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 1.4E-61 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 828 839 1.4E-61 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 674 696 1.4E-61 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 719 742 1.4E-61 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 PRINTS PR00868 DNA-polymerase family A (pol I) signature 860 876 1.4E-61 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:3.30.70.370 682 944 1.6E-98 T 11-10-2018 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Pfam PF01612 3'-5' exonuclease 340 535 9.7E-39 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 TIGRFAM TIGR00593 pola: DNA polymerase I 7 948 1.1E-260 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 SUPERFAMILY SSF53098 338 535 6.42E-47 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 SMART SM00482 705 908 1.2E-98 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:1.10.150.20 728 867 1.6E-98 T 11-10-2018 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 181 272 2.1E-26 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:1.10.150.20 184 257 1.1E-85 T 11-10-2018 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 SUPERFAMILY SSF88723 4 180 5.23E-48 T 11-10-2018 IPR029060 PIN-like domain superfamily AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Pfam PF00476 DNA polymerase family A 569 945 3.2E-138 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 SUPERFAMILY SSF47807 181 296 2.24E-27 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 SMART SM00474 340 536 1.5E-33 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 ProSitePatterns PS00447 DNA polymerase family A signature. 769 788 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:3.40.50.1010 7 288 1.1E-85 T 11-10-2018 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 180 2.8E-51 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 SMART SM00279 183 218 3.1E-11 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:3.30.420.10 337 560 7.6E-61 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 SUPERFAMILY SSF56672 543 948 3.56E-139 T 11-10-2018 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 SMART SM00475 5 272 3.2E-102 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AMC99_02788 d0130574fb78d93c9b83b870c6532a89 948 Gene3D G3DSA:1.20.1060.10 561 677 3.5E-40 T 11-10-2018 AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 SMART SM00357 188 253 1.6E-13 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 SMART SM00357 101 165 1.7E-19 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 Gene3D G3DSA:2.40.50.140 99 165 4.1E-20 T 11-10-2018 AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 Gene3D G3DSA:2.40.50.140 172 250 1.3E-19 T 11-10-2018 AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 SUPERFAMILY SSF50249 101 164 2.57E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 SUPERFAMILY SSF50249 185 252 1.2E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 ProSitePatterns PS00352 'Cold-shock' domain signature. 113 132 - T 11-10-2018 IPR019844 Cold-shock conserved site AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 Pfam PF00313 'Cold-shock' DNA-binding domain 101 163 2.6E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 Pfam PF00313 'Cold-shock' DNA-binding domain 189 251 1.7E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 PRINTS PR00050 Cold shock protein signature 189 204 2.3E-9 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 PRINTS PR00050 Cold shock protein signature 210 219 2.3E-9 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_02716 30c7fa3b81fa1ee1dd3685216aef833e 255 PRINTS PR00050 Cold shock protein signature 225 243 2.3E-9 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 366 7.7E-22 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 SMART SM00959 5 47 7.5E-16 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 Pfam PF07497 Rho termination factor, RNA-binding domain 56 128 1.6E-29 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 SUPERFAMILY SSF68912 1 46 1.26E-11 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 SMART SM00357 55 121 1.4E-13 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 1.9E-15 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 Gene3D G3DSA:3.40.50.300 133 420 1.7E-123 T 11-10-2018 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 Gene3D G3DSA:1.10.720.10 1 46 7.0E-16 T 11-10-2018 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 421 1.1E-206 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 421 237.648 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 SUPERFAMILY SSF50249 52 128 3.71E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 SUPERFAMILY SSF52540 94 374 1.57E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 SMART SM00382 173 358 5.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02544 cc01ea39eba0bc9d18ee444b29d066cc 421 Gene3D G3DSA:2.40.50.140 50 126 2.1E-30 T 11-10-2018 AMC99_01749 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 SMART SM01003 4 138 3.9E-56 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMC99_01749 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 142 368 1.8E-65 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMC99_01749 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 SMART SM01002 147 313 2.9E-79 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMC99_01749 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 Gene3D G3DSA:3.40.50.720 5 354 3.4E-127 T 11-10-2018 AMC99_01749 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 138 1.7E-38 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMC99_01749 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 SUPERFAMILY SSF52283 2 169 1.02E-47 T 11-10-2018 AMC99_01749 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 SUPERFAMILY SSF51735 138 319 6.84E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01749 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 171 196 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 AMC99_01749 94ed14f7ef7bbfb79ee5d8b51cc3899e 373 Gene3D G3DSA:3.40.50.720 138 320 3.4E-127 T 11-10-2018 AMC99_00811 26042e28862a8774cc2aa4018a80c1c8 246 SUPERFAMILY SSF103088 112 228 3.4E-22 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_00811 26042e28862a8774cc2aa4018a80c1c8 246 Pfam PF00691 OmpA family 131 213 2.5E-16 T 11-10-2018 IPR006665 OmpA-like domain AMC99_00811 26042e28862a8774cc2aa4018a80c1c8 246 PRINTS PR01021 OMPA domain signature 131 153 1.3E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_00811 26042e28862a8774cc2aa4018a80c1c8 246 PRINTS PR01021 OMPA domain signature 176 192 1.3E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_00811 26042e28862a8774cc2aa4018a80c1c8 246 PRINTS PR01021 OMPA domain signature 161 176 1.3E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_00811 26042e28862a8774cc2aa4018a80c1c8 246 Gene3D G3DSA:3.30.1330.60 113 233 4.0E-24 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_01954 0e63b92dd2ea5b72329f857741051961 153 Gene3D G3DSA:3.40.1280.10 1 152 4.7E-54 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_01954 0e63b92dd2ea5b72329f857741051961 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 30.187 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AMC99_01954 0e63b92dd2ea5b72329f857741051961 153 PIRSF PIRSF029256 1 152 3.6E-51 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 AMC99_01954 0e63b92dd2ea5b72329f857741051961 153 Pfam PF00588 SpoU rRNA Methylase family 3 144 5.5E-31 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMC99_01954 0e63b92dd2ea5b72329f857741051961 153 SUPERFAMILY SSF75217 3 150 1.37E-34 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMC99_02689 8b42db6b109d546479257ba3e067f662 311 Gene3D G3DSA:3.40.50.2020 144 287 1.2E-121 T 11-10-2018 AMC99_02689 8b42db6b109d546479257ba3e067f662 311 SMART SM01400 1 117 4.0E-78 T 11-10-2018 AMC99_02689 8b42db6b109d546479257ba3e067f662 311 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 3.8E-48 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMC99_02689 8b42db6b109d546479257ba3e067f662 311 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AMC99_02689 8b42db6b109d546479257ba3e067f662 311 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 310 3.2E-26 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMC99_02689 8b42db6b109d546479257ba3e067f662 311 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 311 48.931 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 AMC99_02689 8b42db6b109d546479257ba3e067f662 311 SUPERFAMILY SSF53271 66 301 2.09E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMC99_02689 8b42db6b109d546479257ba3e067f662 311 Gene3D G3DSA:3.40.50.2020 5 299 1.2E-121 T 11-10-2018 AMC99_02689 8b42db6b109d546479257ba3e067f662 311 SUPERFAMILY SSF53271 8 92 3.23E-5 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMC99_02689 8b42db6b109d546479257ba3e067f662 311 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 2.6E-114 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AMC99_01642 3458acc8b53fb86ffddb9739c5a1658a 312 Gene3D G3DSA:3.40.50.720 97 278 3.0E-74 T 11-10-2018 AMC99_01642 3458acc8b53fb86ffddb9739c5a1658a 312 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 55 301 2.7E-7 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMC99_01642 3458acc8b53fb86ffddb9739c5a1658a 312 SUPERFAMILY SSF51735 95 275 2.72E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01642 3458acc8b53fb86ffddb9739c5a1658a 312 SUPERFAMILY SSF52283 12 126 1.68E-9 T 11-10-2018 AMC99_01642 3458acc8b53fb86ffddb9739c5a1658a 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 273 4.5E-40 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMC99_01642 3458acc8b53fb86ffddb9739c5a1658a 312 Gene3D G3DSA:3.40.50.720 22 302 3.0E-74 T 11-10-2018 AMC99_01642 3458acc8b53fb86ffddb9739c5a1658a 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 213 229 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 254 5.6E-62 T 11-10-2018 AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 SUPERFAMILY SSF51735 6 256 3.08E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 Gene3D G3DSA:3.40.50.720 3 257 1.5E-80 T 11-10-2018 AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 257 9.3E-120 T 11-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.2E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.2E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.2E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.2E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.2E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.2E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 9.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 9.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00489 4515e1ad7fb5dfe9389fe5803bf2a843 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 9.3E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF01131 DNA topoisomerase 129 541 1.7E-122 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 SUPERFAMILY SSF56712 1 593 1.57E-185 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 588 626 1.1E-9 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 625 8.3E-217 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:2.70.20.10 185 451 1.3E-156 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:1.10.290.10 254 376 1.3E-156 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 SUPERFAMILY SSF57783 598 627 4.93E-7 T 11-10-2018 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:1.10.460.10 139 544 1.3E-156 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 361 377 3.4E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 3.4E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 163 181 3.4E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 467 481 3.4E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 288 297 3.4E-33 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:3.40.50.140 1 135 1.8E-49 T 11-10-2018 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 SMART SM00437 246 504 6.4E-104 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 SMART SM00436 105 193 2.9E-42 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 283 297 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 722 52.007 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF13368 Topoisomerase C-terminal repeat 701 754 4.9E-19 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF13368 Topoisomerase C-terminal repeat 769 821 1.7E-18 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF13368 Topoisomerase C-terminal repeat 645 696 6.3E-11 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Pfam PF01751 Toprim domain 2 114 2.5E-26 T 11-10-2018 IPR006171 TOPRIM domain AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 SMART SM00493 1 101 5.6E-30 T 11-10-2018 IPR006171 TOPRIM domain AMC99_00904 84ddeab62fd47fc3973d7c3133e24603 846 Gene3D G3DSA:3.30.65.10 590 629 1.0E-5 T 11-10-2018 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 Pfam PF13533 Biotin-lipoyl like 57 96 3.0E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 Gene3D G3DSA:2.40.30.170 42 51 1.5E-6 T 11-10-2018 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 Gene3D G3DSA:2.40.50.100 52 86 1.5E-6 T 11-10-2018 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 SUPERFAMILY SSF56954 136 229 2.22E-5 T 11-10-2018 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 17 423 6.6E-108 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 Gene3D G3DSA:1.10.287.470 87 111 1.5E-6 T 11-10-2018 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 Gene3D G3DSA:1.10.287.470 147 237 8.4E-7 T 11-10-2018 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 Pfam PF13437 HlyD family secretion protein 274 385 2.6E-18 T 11-10-2018 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 Pfam PF02321 Outer membrane efflux protein 142 228 1.3E-8 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 ProSitePatterns PS00543 HlyD family secretion proteins signature. 387 409 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 23 46 9.6E-43 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 286 307 9.6E-43 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 85 9.6E-43 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 366 9.6E-43 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 319 343 9.6E-43 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 387 402 9.6E-43 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 402 422 9.6E-43 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AMC99_01555 9615c43a7cfd7aa02025d3e6738a40f0 423 Gene3D G3DSA:2.40.30.170 292 405 4.7E-14 T 11-10-2018 AMC99_00241 858ab7fa89d16617dd0cc445c3055e0e 243 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 150 164 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMC99_00241 858ab7fa89d16617dd0cc445c3055e0e 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AMC99_00241 858ab7fa89d16617dd0cc445c3055e0e 243 SUPERFAMILY SSF53335 9 238 9.31E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00241 858ab7fa89d16617dd0cc445c3055e0e 243 Gene3D G3DSA:3.40.50.150 27 243 2.3E-72 T 11-10-2018 AMC99_00241 858ab7fa89d16617dd0cc445c3055e0e 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 242 2.2E-78 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMC99_00241 858ab7fa89d16617dd0cc445c3055e0e 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 242 2.8E-81 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMC99_00241 858ab7fa89d16617dd0cc445c3055e0e 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 242 35.492 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMC99_01095 bf2a702a7707417a10ad19bae65e2e56 372 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 7 365 25.841 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01095 bf2a702a7707417a10ad19bae65e2e56 372 Pfam PF01098 Cell cycle protein 17 362 1.0E-92 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01095 bf2a702a7707417a10ad19bae65e2e56 372 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 14 361 2.1E-122 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_02134 c0412175c1ec37845f6b33e8e03daa28 618 Pfam PF02421 Ferrous iron transport protein B 6 166 6.2E-52 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 AMC99_02134 c0412175c1ec37845f6b33e8e03daa28 618 Gene3D G3DSA:3.40.50.300 3 190 7.9E-43 T 11-10-2018 AMC99_02134 c0412175c1ec37845f6b33e8e03daa28 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 2.1E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_02134 c0412175c1ec37845f6b33e8e03daa28 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 2.1E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_02134 c0412175c1ec37845f6b33e8e03daa28 618 Pfam PF07670 Nucleoside recognition 288 380 3.9E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMC99_02134 c0412175c1ec37845f6b33e8e03daa28 618 Pfam PF07670 Nucleoside recognition 457 588 1.1E-22 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 AMC99_02134 c0412175c1ec37845f6b33e8e03daa28 618 Pfam PF07664 Ferrous iron transport protein B C terminus 400 452 3.7E-18 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AMC99_02134 c0412175c1ec37845f6b33e8e03daa28 618 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 163 1.6E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_02134 c0412175c1ec37845f6b33e8e03daa28 618 SUPERFAMILY SSF52540 6 170 4.33E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01614 39f9cafbae8a439d73b730a9379ba28b 347 SUPERFAMILY SSF52540 138 318 3.13E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01614 39f9cafbae8a439d73b730a9379ba28b 347 Pfam PF02562 PhoH-like protein 139 343 1.2E-89 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 AMC99_01614 39f9cafbae8a439d73b730a9379ba28b 347 Gene3D G3DSA:3.40.50.300 135 343 6.5E-70 T 11-10-2018 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 118 5.6E-36 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 Pfam PF02772 S-adenosylmethionine synthetase, central domain 133 252 1.2E-36 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 SUPERFAMILY SSF55973 129 252 1.06E-40 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 280 288 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 SUPERFAMILY SSF55973 254 408 5.89E-60 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 254 398 1.1E-60 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 Gene3D G3DSA:3.30.300.10 120 400 1.1E-151 T 11-10-2018 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 SUPERFAMILY SSF55973 4 126 7.06E-35 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 PIRSF PIRSF000497 1 410 4.9E-149 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 409 47.535 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 Gene3D G3DSA:3.30.300.10 12 291 1.1E-151 T 11-10-2018 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 84 408 2.0E-119 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 134 144 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AMC99_02779 e0074f4f616625f9f5cebd2fdf5bab6b 410 Gene3D G3DSA:3.30.300.10 6 254 1.1E-151 T 11-10-2018 AMC99_02038 43712fd0332dca2186b05b0ffef13183 925 SUPERFAMILY SSF51621 2 861 5.96E-130 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMC99_02038 43712fd0332dca2186b05b0ffef13183 925 Pfam PF00311 Phosphoenolpyruvate carboxylase 304 673 1.1E-16 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_02038 43712fd0332dca2186b05b0ffef13183 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 665 691 6.3E-5 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_02038 43712fd0332dca2186b05b0ffef13183 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 197 212 6.3E-5 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_02038 43712fd0332dca2186b05b0ffef13183 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 106 119 6.3E-5 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_02038 43712fd0332dca2186b05b0ffef13183 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 474 494 6.3E-5 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 Gene3D G3DSA:2.40.50.100 620 688 1.7E-19 T 11-10-2018 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.5E-44 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 SUPERFAMILY SSF52440 1 113 6.47E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 Pfam PF02785 Biotin carboxylase C-terminal domain 340 460 2.4E-33 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 SUPERFAMILY SSF51246 335 463 2.51E-37 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 327 4.4E-76 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 SMART SM00878 340 460 2.8E-54 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 SUPERFAMILY SSF56059 83 352 1.38E-66 T 11-10-2018 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 Gene3D G3DSA:3.30.470.130 1 465 1.0E-194 T 11-10-2018 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 644 661 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 Pfam PF00364 Biotin-requiring enzyme 624 687 1.7E-14 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 SUPERFAMILY SSF51230 609 688 6.41E-18 T 11-10-2018 IPR011053 Single hybrid motif AMC99_00926 16e109e7e025a594ef34244fe90ef9d4 688 Gene3D G3DSA:3.30.700.30 467 608 2.1E-14 T 11-10-2018 AMC99_01125 5ce7f69d4823b243cab897f70ac5099e 431 Pfam PF05977 Transmembrane secretion effector 10 406 1.5E-27 T 11-10-2018 IPR010290 Transmembrane secretion effector AMC99_01125 5ce7f69d4823b243cab897f70ac5099e 431 SUPERFAMILY SSF103473 18 409 1.27E-35 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_01125 5ce7f69d4823b243cab897f70ac5099e 431 Gene3D G3DSA:1.20.1250.20 13 404 3.3E-32 T 11-10-2018 AMC99_00154 214739fe79d9a974c00b3b8eef280115 268 Gene3D G3DSA:1.10.540.10 8 109 3.3E-6 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00154 214739fe79d9a974c00b3b8eef280115 268 SUPERFAMILY SSF47203 113 254 5.64E-28 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00154 214739fe79d9a974c00b3b8eef280115 268 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 112 231 5.8E-17 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00154 214739fe79d9a974c00b3b8eef280115 268 SUPERFAMILY SSF56645 11 106 2.68E-5 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00154 214739fe79d9a974c00b3b8eef280115 268 Gene3D G3DSA:1.20.140.10 110 255 5.5E-24 T 11-10-2018 AMC99_01714 6fbefe5f78d0bbfc9246568c73183747 519 Gene3D G3DSA:3.30.420.150 124 307 2.5E-48 T 11-10-2018 AMC99_01714 6fbefe5f78d0bbfc9246568c73183747 519 Gene3D G3DSA:3.30.420.40 7 123 1.7E-32 T 11-10-2018 AMC99_01714 6fbefe5f78d0bbfc9246568c73183747 519 SUPERFAMILY SSF53067 143 312 4.79E-31 T 11-10-2018 AMC99_01714 6fbefe5f78d0bbfc9246568c73183747 519 Pfam PF02541 Ppx/GppA phosphatase family 41 311 6.6E-47 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AMC99_01714 6fbefe5f78d0bbfc9246568c73183747 519 SUPERFAMILY SSF53067 21 139 1.78E-30 T 11-10-2018 AMC99_01714 6fbefe5f78d0bbfc9246568c73183747 519 Gene3D G3DSA:1.10.3210.10 309 498 1.2E-34 T 11-10-2018 AMC99_01812 acfb51f5a1db6d11d4a5106366e2897f 396 Pfam PF00534 Glycosyl transferases group 1 197 356 4.3E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMC99_01812 acfb51f5a1db6d11d4a5106366e2897f 396 Pfam PF13439 Glycosyltransferase Family 4 20 186 2.5E-23 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMC99_01812 acfb51f5a1db6d11d4a5106366e2897f 396 Gene3D G3DSA:3.40.50.2000 11 375 1.5E-62 T 11-10-2018 AMC99_01812 acfb51f5a1db6d11d4a5106366e2897f 396 SUPERFAMILY SSF53756 7 381 4.32E-73 T 11-10-2018 AMC99_01812 acfb51f5a1db6d11d4a5106366e2897f 396 Gene3D G3DSA:3.40.50.2000 184 359 1.5E-62 T 11-10-2018 AMC99_01284 a32ddef18a06ff140ae669414c9878b4 244 Gene3D G3DSA:3.40.50.720 7 244 2.8E-40 T 11-10-2018 AMC99_01284 a32ddef18a06ff140ae669414c9878b4 244 SUPERFAMILY SSF51735 14 243 1.62E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01284 a32ddef18a06ff140ae669414c9878b4 244 Pfam PF00106 short chain dehydrogenase 13 201 9.8E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01284 a32ddef18a06ff140ae669414c9878b4 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01284 a32ddef18a06ff140ae669414c9878b4 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01284 a32ddef18a06ff140ae669414c9878b4 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 4.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01284 a32ddef18a06ff140ae669414c9878b4 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.0E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02813 774ecdba96acabd07ef9c6e73813401e 95 SUPERFAMILY SSF141371 1 86 3.92E-12 T 11-10-2018 AMC99_02813 774ecdba96acabd07ef9c6e73813401e 95 Pfam PF07238 PilZ domain 2 93 4.9E-13 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMC99_02813 774ecdba96acabd07ef9c6e73813401e 95 Gene3D G3DSA:2.40.10.220 1 95 3.4E-11 T 11-10-2018 AMC99_02027 5985181ff03a1e643dad1c450b6a745c 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 240 7.2E-65 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMC99_02027 5985181ff03a1e643dad1c450b6a745c 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 254 35.559 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMC99_02027 5985181ff03a1e643dad1c450b6a745c 254 Gene3D G3DSA:3.40.1210.10 1 253 2.6E-85 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMC99_02027 5985181ff03a1e643dad1c450b6a745c 254 Pfam PF01975 Survival protein SurE 3 188 9.9E-56 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AMC99_02027 5985181ff03a1e643dad1c450b6a745c 254 SUPERFAMILY SSF64167 1 252 9.55E-76 T 11-10-2018 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 Gene3D G3DSA:1.10.150.380 310 436 3.0E-18 T 11-10-2018 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 SUPERFAMILY SSF89095 364 497 5.23E-20 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 SMART SM00845 341 497 1.6E-52 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 Pfam PF02637 GatB domain 360 497 5.8E-38 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 12 498 35.307 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 SUPERFAMILY SSF55931 14 309 4.64E-113 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 158 172 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 Gene3D G3DSA:1.10.10.410 437 498 7.4E-26 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 Pfam PF02934 GatB/GatE catalytic domain 15 301 4.7E-112 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 SUPERFAMILY SSF89095 310 361 2.88E-8 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AMC99_01956 e66ee25cefe08301b3f8536fd5c12710 498 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 12 497 1.1E-152 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMC99_02020 a73583f433346e6a7f313a534f6baed0 420 PIRSF PIRSF000151 5 420 1.6E-160 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMC99_02020 a73583f433346e6a7f313a534f6baed0 420 Pfam PF00171 Aldehyde dehydrogenase family 16 288 1.2E-17 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_02020 a73583f433346e6a7f313a534f6baed0 420 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 19 409 2.5E-128 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_02020 a73583f433346e6a7f313a534f6baed0 420 Gene3D G3DSA:3.40.605.10 24 414 1.1E-147 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_02020 a73583f433346e6a7f313a534f6baed0 420 SUPERFAMILY SSF53720 12 419 4.45E-106 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_02020 a73583f433346e6a7f313a534f6baed0 420 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 11 419 38.457 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_02020 a73583f433346e6a7f313a534f6baed0 420 Gene3D G3DSA:3.40.309.10 231 377 1.1E-147 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 SUPERFAMILY SSF51735 11 253 1.65E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 253 4.1E-43 T 11-10-2018 AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.9E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.9E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.9E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 Gene3D G3DSA:3.40.50.720 5 254 3.7E-69 T 11-10-2018 AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00426 6be509531506a5986ec1c9d3e5011734 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.2E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00756 502d4c7fdea56396a186f753235bd44f 55 Pfam PF13471 Transglutaminase-like superfamily 1 48 5.5E-7 T 11-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal AMC99_02535 2e6e475d3bdc04aba7bde9cf067b54ba 153 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 15 146 3.8E-30 T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMC99_02535 2e6e475d3bdc04aba7bde9cf067b54ba 153 SUPERFAMILY SSF55804 16 146 2.88E-35 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMC99_02535 2e6e475d3bdc04aba7bde9cf067b54ba 153 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 50 66 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain AMC99_02535 2e6e475d3bdc04aba7bde9cf067b54ba 153 Gene3D G3DSA:3.40.930.10 8 148 2.7E-43 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 159 321 7.6E-39 T 11-10-2018 IPR000160 GGDEF domain AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 SUPERFAMILY SSF55785 49 149 6.28E-9 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 SMART SM00052 333 576 1.3E-72 T 11-10-2018 IPR001633 EAL domain AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 Gene3D G3DSA:3.30.70.270 161 336 2.8E-53 T 11-10-2018 AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 SUPERFAMILY SSF55073 167 324 1.49E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 Pfam PF00990 Diguanylate cyclase, GGDEF domain 162 318 1.2E-40 T 11-10-2018 IPR000160 GGDEF domain AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 SMART SM00267 151 323 1.2E-45 T 11-10-2018 IPR000160 GGDEF domain AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 Pfam PF08448 PAS fold 45 152 1.2E-5 T 11-10-2018 IPR013656 PAS fold-4 AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 Gene3D G3DSA:3.30.450.20 45 160 5.0E-11 T 11-10-2018 AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 SUPERFAMILY SSF141868 338 580 8.37E-65 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 Gene3D G3DSA:3.20.20.450 337 583 1.4E-72 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_01372 47bd1885f82cfd89c0f2943a2b6f80b2 733 Pfam PF00563 EAL domain 340 571 5.2E-57 T 11-10-2018 IPR001633 EAL domain AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF00571 CBS domain 167 219 2.3E-9 T 11-10-2018 IPR000644 CBS domain AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF00571 CBS domain 230 282 4.0E-12 T 11-10-2018 IPR000644 CBS domain AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SUPERFAMILY SSF54631 165 285 2.53E-32 T 11-10-2018 AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Gene3D G3DSA:3.10.580.10 160 289 1.2E-35 T 11-10-2018 AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SUPERFAMILY SSF51206 7 130 2.23E-21 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SMART SM00116 173 220 2.2E-6 T 11-10-2018 IPR000644 CBS domain AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SMART SM00116 237 285 1.1E-9 T 11-10-2018 IPR000644 CBS domain AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SUPERFAMILY SSF81301 270 407 2.21E-7 T 11-10-2018 AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF03445 Putative nucleotidyltransferase DUF294 311 447 4.5E-39 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF00027 Cyclic nucleotide-binding domain 40 120 3.6E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 SMART SM00100 20 137 4.3E-6 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 484 624 5.8E-41 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding AMC99_00507 1dc0082a32e580d5bcf0e15e5c3aa76b 632 Gene3D G3DSA:2.60.120.10 9 146 1.4E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_02621 e50400c3ab14491973873f578f317019 317 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 11-10-2018 IPR018253 DnaJ domain, conserved site AMC99_02621 e50400c3ab14491973873f578f317019 317 PRINTS PR00625 DnaJ domain signature 5 23 2.5E-18 T 11-10-2018 IPR001623 DnaJ domain AMC99_02621 e50400c3ab14491973873f578f317019 317 PRINTS PR00625 DnaJ domain signature 23 38 2.5E-18 T 11-10-2018 IPR001623 DnaJ domain AMC99_02621 e50400c3ab14491973873f578f317019 317 PRINTS PR00625 DnaJ domain signature 40 60 2.5E-18 T 11-10-2018 IPR001623 DnaJ domain AMC99_02621 e50400c3ab14491973873f578f317019 317 SUPERFAMILY SSF49493 144 219 9.03E-14 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMC99_02621 e50400c3ab14491973873f578f317019 317 Pfam PF00226 DnaJ domain 3 65 1.8E-24 T 11-10-2018 IPR001623 DnaJ domain AMC99_02621 e50400c3ab14491973873f578f317019 317 Gene3D G3DSA:2.60.260.20 214 292 9.0E-26 T 11-10-2018 AMC99_02621 e50400c3ab14491973873f578f317019 317 SUPERFAMILY SSF46565 2 98 1.7E-26 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_02621 e50400c3ab14491973873f578f317019 317 Gene3D G3DSA:2.60.260.20 145 212 1.1E-14 T 11-10-2018 AMC99_02621 e50400c3ab14491973873f578f317019 317 SUPERFAMILY SSF49493 218 295 9.42E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMC99_02621 e50400c3ab14491973873f578f317019 317 Pfam PF01556 DnaJ C terminal domain 150 292 6.5E-30 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal AMC99_02621 e50400c3ab14491973873f578f317019 317 SMART SM00271 2 60 7.6E-26 T 11-10-2018 IPR001623 DnaJ domain AMC99_02621 e50400c3ab14491973873f578f317019 317 Gene3D G3DSA:1.10.287.110 1 136 1.1E-27 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_00086 5accc4ef2ba71c83f6ccfa7c4174d609 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 292 1.0E-20 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMC99_00086 5accc4ef2ba71c83f6ccfa7c4174d609 381 SUPERFAMILY SSF111369 81 299 8.37E-17 T 11-10-2018 AMC99_00086 5accc4ef2ba71c83f6ccfa7c4174d609 381 Gene3D G3DSA:1.10.287.470 118 187 1.2E-58 T 11-10-2018 AMC99_00086 5accc4ef2ba71c83f6ccfa7c4174d609 381 Gene3D G3DSA:2.40.30.170 70 301 1.2E-58 T 11-10-2018 AMC99_00086 5accc4ef2ba71c83f6ccfa7c4174d609 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 369 2.0E-49 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMC99_00086 5accc4ef2ba71c83f6ccfa7c4174d609 381 Gene3D G3DSA:2.40.420.20 60 360 1.2E-58 T 11-10-2018 AMC99_00086 5accc4ef2ba71c83f6ccfa7c4174d609 381 Gene3D G3DSA:2.40.50.100 84 222 1.2E-58 T 11-10-2018 AMC99_02723 8648afd59ea067ddd17fdf579dbc4ad8 67 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 1 62 2.2E-11 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMC99_02723 8648afd59ea067ddd17fdf579dbc4ad8 67 Gene3D G3DSA:2.60.40.200 1 66 6.9E-16 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMC99_02723 8648afd59ea067ddd17fdf579dbc4ad8 67 SUPERFAMILY SSF49329 1 64 1.44E-13 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 Gene3D G3DSA:1.10.10.10 4 90 1.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.6E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 Gene3D G3DSA:3.40.190.10 166 270 2.2E-55 T 11-10-2018 AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 SUPERFAMILY SSF53850 93 297 4.78E-35 T 11-10-2018 AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 SUPERFAMILY SSF46785 5 116 1.93E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 Pfam PF03466 LysR substrate binding domain 93 297 6.8E-41 T 11-10-2018 IPR005119 LysR, substrate-binding AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 Gene3D G3DSA:3.40.190.10 97 293 2.2E-55 T 11-10-2018 AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_00722 1fbb4f532e81375a96c1b5d8d13b83e4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_00413 8df751267cd7ef286908d2a0498b533c 82 SUPERFAMILY SSF47592 4 81 3.92E-26 T 11-10-2018 IPR036885 SWIB/MDM2 domain superfamily AMC99_00413 8df751267cd7ef286908d2a0498b533c 82 Pfam PF02201 SWIB/MDM2 domain 9 81 1.3E-28 T 11-10-2018 IPR003121 SWIB/MDM2 domain GO:0005515 AMC99_00413 8df751267cd7ef286908d2a0498b533c 82 SMART SM00151 7 81 1.4E-27 T 11-10-2018 IPR019835 SWIB domain Reactome: R-HSA-3214858|Reactome: R-HSA-8939243 AMC99_00413 8df751267cd7ef286908d2a0498b533c 82 Gene3D G3DSA:1.10.245.10 1 82 4.9E-28 T 11-10-2018 IPR036885 SWIB/MDM2 domain superfamily AMC99_02442 448bb8e30c5b30159d70025175f24533 227 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 196 7.7E-51 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_02442 448bb8e30c5b30159d70025175f24533 227 Gene3D G3DSA:3.30.1060.10 11 205 2.4E-57 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_02442 448bb8e30c5b30159d70025175f24533 227 SUPERFAMILY SSF55068 39 208 2.75E-61 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_02442 448bb8e30c5b30159d70025175f24533 227 Pfam PF01625 Peptide methionine sulfoxide reductase 46 198 4.0E-52 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_02442 448bb8e30c5b30159d70025175f24533 227 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 44 204 33.19 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 AMC99_02215 16a92d19c998d931df69c52d324aa84c 313 Gene3D G3DSA:2.60.120.330 3 313 2.6E-102 T 11-10-2018 IPR027443 Isopenicillin N synthase-like AMC99_02215 16a92d19c998d931df69c52d324aa84c 313 SUPERFAMILY SSF51197 4 309 4.05E-83 T 11-10-2018 AMC99_02215 16a92d19c998d931df69c52d324aa84c 313 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 17 122 1.6E-26 T 11-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain AMC99_02215 16a92d19c998d931df69c52d324aa84c 313 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 168 271 3.2E-15 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMC99_01717 71cf1c5ca08217dce3341a595ab7c30b 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 244 3.3E-56 T 11-10-2018 AMC99_01717 71cf1c5ca08217dce3341a595ab7c30b 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_01717 71cf1c5ca08217dce3341a595ab7c30b 245 Gene3D G3DSA:3.40.50.720 1 243 4.8E-66 T 11-10-2018 AMC99_01717 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.8E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01717 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.8E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01717 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.8E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01717 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.8E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01717 71cf1c5ca08217dce3341a595ab7c30b 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.8E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01717 71cf1c5ca08217dce3341a595ab7c30b 245 SUPERFAMILY SSF51735 10 245 2.29E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00373 152c64b4e2ed420171144300b305f42c 497 Gene3D G3DSA:3.90.226.10 248 496 5.4E-67 T 11-10-2018 AMC99_00373 152c64b4e2ed420171144300b305f42c 497 Pfam PF01039 Carboxyl transferase domain 9 492 4.4E-75 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMC99_00373 152c64b4e2ed420171144300b305f42c 497 Gene3D G3DSA:3.90.226.10 1 247 5.5E-49 T 11-10-2018 AMC99_00373 152c64b4e2ed420171144300b305f42c 497 SUPERFAMILY SSF52096 2 243 4.62E-40 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_00373 152c64b4e2ed420171144300b305f42c 497 SUPERFAMILY SSF52096 212 484 1.24E-60 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_01481 c4656074c0bbdb245a010dd636cb0f66 256 Gene3D G3DSA:3.40.50.720 4 250 2.4E-45 T 11-10-2018 AMC99_01481 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01481 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01481 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01481 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01481 c4656074c0bbdb245a010dd636cb0f66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01481 c4656074c0bbdb245a010dd636cb0f66 256 SUPERFAMILY SSF51735 5 237 3.73E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01481 c4656074c0bbdb245a010dd636cb0f66 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 236 5.3E-32 T 11-10-2018 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.3E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 381 403 1.3E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.3E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 301 319 1.3E-25 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 281 2.9E-54 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 SUPERFAMILY SSF50621 255 416 6.07E-45 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 Gene3D G3DSA:3.20.20.10 34 277 1.3E-134 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 371 384 1.8E-21 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.8E-21 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.8E-21 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.8E-21 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.8E-21 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 Gene3D G3DSA:2.40.37.10 17 403 1.3E-134 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 414 37.808 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 371 2.1E-23 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 SUPERFAMILY SSF51419 26 284 1.02E-71 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_01799 cd2b01363a3a8120bf05862a2534fdb9 419 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 411 3.2E-131 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_01590 8f70ae2556727dae4b80d321c0de5238 359 ProSitePatterns PS00770 Aminotransferases class-IV signature. 234 264 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 AMC99_01590 8f70ae2556727dae4b80d321c0de5238 359 Gene3D G3DSA:3.30.470.10 26 354 8.3E-128 T 11-10-2018 AMC99_01590 8f70ae2556727dae4b80d321c0de5238 359 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 46 358 1.5E-121 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AMC99_01590 8f70ae2556727dae4b80d321c0de5238 359 Pfam PF01063 Amino-transferase class IV 72 313 1.0E-28 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 AMC99_01590 8f70ae2556727dae4b80d321c0de5238 359 SUPERFAMILY SSF56752 3 355 4.84E-111 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 AMC99_01590 8f70ae2556727dae4b80d321c0de5238 359 Gene3D G3DSA:3.20.10.10 173 341 8.3E-128 T 11-10-2018 AMC99_01590 8f70ae2556727dae4b80d321c0de5238 359 PIRSF PIRSF006468 4 359 5.0E-123 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 AMC99_01329 525d63afc793b12126d07c6fc47dfd58 238 SUPERFAMILY SSF51735 4 237 2.76E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01329 525d63afc793b12126d07c6fc47dfd58 238 Gene3D G3DSA:3.40.50.720 2 234 3.2E-57 T 11-10-2018 AMC99_01329 525d63afc793b12126d07c6fc47dfd58 238 Pfam PF00106 short chain dehydrogenase 11 202 4.4E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01329 525d63afc793b12126d07c6fc47dfd58 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.4E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01329 525d63afc793b12126d07c6fc47dfd58 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.4E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01329 525d63afc793b12126d07c6fc47dfd58 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 7.4E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01329 525d63afc793b12126d07c6fc47dfd58 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 7.4E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01953 7079c5ca33026b3791d1f649a17d1ed7 49 Gene3D G3DSA:3.30.110.40 1 48 5.9E-14 T 11-10-2018 IPR036868 TusA-like domain superfamily AMC99_01953 7079c5ca33026b3791d1f649a17d1ed7 49 SUPERFAMILY SSF64307 2 47 4.97E-11 T 11-10-2018 IPR036868 TusA-like domain superfamily AMC99_01953 7079c5ca33026b3791d1f649a17d1ed7 49 Pfam PF01206 Sulfurtransferase TusA 1 47 5.1E-11 T 11-10-2018 IPR001455 TusA-like domain AMC99_01035 d3b9022669da333e0b2c8b70e65e8b19 329 Gene3D G3DSA:3.20.20.70 9 321 4.7E-54 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01035 d3b9022669da333e0b2c8b70e65e8b19 329 SUPERFAMILY SSF51412 9 304 7.69E-56 T 11-10-2018 AMC99_01035 d3b9022669da333e0b2c8b70e65e8b19 329 Pfam PF03060 Nitronate monooxygenase 76 249 8.4E-11 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 SUPERFAMILY SSF88659 582 684 1.96E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Gene3D G3DSA:1.10.10.10 525 600 1.2E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 645 671 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 10 685 43.341 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 448 684 2.4E-119 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 SUPERFAMILY SSF88659 525 598 2.57E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF04546 Sigma-70, non-essential region 169 420 1.2E-38 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 624 636 6.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 476 489 6.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 500 508 6.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 660 671 6.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 PRINTS PR00046 Major sigma-70 factor signature 645 660 6.7E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Gene3D G3DSA:1.10.10.10 602 686 9.7E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF04539 Sigma-70 region 3 531 606 3.8E-28 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF04545 Sigma-70, region 4 620 673 1.8E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF04542 Sigma-70 region 2 452 521 2.0E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF00140 Sigma-70 factor, region 1.2 127 158 1.7E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Gene3D G3DSA:1.10.601.10 142 521 1.5E-110 T 11-10-2018 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 449 673 1.2E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 476 489 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Pfam PF03979 Sigma-70 factor, region 1.1 19 97 1.2E-22 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 SUPERFAMILY SSF88946 144 519 3.45E-94 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_01075 da4f9e647e52e8bd5dc68fffb4a6de80 686 Gene3D G3DSA:1.10.220.120 17 78 6.8E-21 T 11-10-2018 AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Gene3D G3DSA:1.25.40.10 22 188 3.8E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SUPERFAMILY SSF81901 256 389 1.19E-21 T 11-10-2018 AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SUPERFAMILY SSF81901 85 283 5.82E-34 T 11-10-2018 AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 166 200 3.3 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 130 163 4.8 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 95 127 46.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 311 336 39.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 242 271 0.28 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 346 378 6.1 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 203 236 0.0093 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Pfam PF08238 Sel1 repeat 275 293 260.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Gene3D G3DSA:1.25.40.10 189 276 1.6E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 Gene3D G3DSA:1.25.40.10 289 391 1.1E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 56 91 2.4 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 128 164 0.13 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 309 344 5.5 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 273 308 0.047 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 92 127 0.0036 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 165 200 0.56 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 346 381 6.0E-4 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 237 272 8.5 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00102 36b114b82d37d002446904ef8e7fbbd2 394 SMART SM00671 201 236 2.5E-4 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00686 b1b5c5ac09f1b8aba491b7746419bfdf 240 PIRSF PIRSF005650 1 240 3.2E-97 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AMC99_00686 b1b5c5ac09f1b8aba491b7746419bfdf 240 Gene3D G3DSA:3.40.1160.10 2 240 1.6E-83 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_00686 b1b5c5ac09f1b8aba491b7746419bfdf 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 44.743 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AMC99_00686 b1b5c5ac09f1b8aba491b7746419bfdf 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 2.2E-102 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AMC99_00686 b1b5c5ac09f1b8aba491b7746419bfdf 240 Pfam PF00696 Amino acid kinase family 7 216 2.7E-33 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMC99_00686 b1b5c5ac09f1b8aba491b7746419bfdf 240 SUPERFAMILY SSF53633 5 236 7.2E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 437 37.341 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 438 1.6E-146 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 388 416 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 Gene3D G3DSA:3.90.550.10 1 229 3.8E-59 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 Gene3D G3DSA:2.160.10.10 230 441 1.4E-50 T 11-10-2018 AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 302 335 8.8E-4 T 11-10-2018 IPR001451 Hexapeptide repeat AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 301 1.6E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 380 412 1.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 SUPERFAMILY SSF53448 4 249 2.29E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 SUPERFAMILY SSF51161 250 420 2.26E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMC99_01672 13d596fa73bff580389d4fdb2263fa8b 453 Pfam PF12804 MobA-like NTP transferase domain 6 129 2.9E-21 T 11-10-2018 IPR025877 MobA-like NTP transferase AMC99_00918 eab3bcd35bc106deceb44c0e3aec28b6 484 Gene3D G3DSA:1.10.260.40 23 91 7.1E-15 T 11-10-2018 AMC99_00918 eab3bcd35bc106deceb44c0e3aec28b6 484 SUPERFAMILY SSF47413 25 84 1.42E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_00918 eab3bcd35bc106deceb44c0e3aec28b6 484 Pfam PF06114 IrrE N-terminal-like domain 226 324 4.1E-12 T 11-10-2018 IPR010359 IrrE N-terminal-like domain AMC99_00918 eab3bcd35bc106deceb44c0e3aec28b6 484 SMART SM00530 29 84 3.7E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_00918 eab3bcd35bc106deceb44c0e3aec28b6 484 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 325 481 1.5E-65 T 11-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator AMC99_00918 eab3bcd35bc106deceb44c0e3aec28b6 484 Pfam PF13560 Helix-turn-helix domain 27 80 1.6E-13 T 11-10-2018 AMC99_00918 eab3bcd35bc106deceb44c0e3aec28b6 484 PIRSF PIRSF019251 19 484 8.2E-187 T 11-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 AMC99_00239 f96817ba9eb6ab811acd86c57e11878d 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 83 2.0E-14 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00239 f96817ba9eb6ab811acd86c57e11878d 86 SUPERFAMILY SSF46992 3 86 3.53E-26 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00239 f96817ba9eb6ab811acd86c57e11878d 86 Pfam PF01649 Ribosomal protein S20 2 83 1.5E-23 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00239 f96817ba9eb6ab811acd86c57e11878d 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 84 8.9E-21 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00239 f96817ba9eb6ab811acd86c57e11878d 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.381 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00239 f96817ba9eb6ab811acd86c57e11878d 86 Gene3D G3DSA:1.20.58.110 1 86 3.0E-25 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_02273 9929a2852b9724cdf73e15c6e084ed9a 207 Pfam PF01914 MarC family integral membrane protein 3 204 1.3E-52 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMC99_02273 9929a2852b9724cdf73e15c6e084ed9a 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 201 5.8E-51 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 AMC99_00778 fd12bef71f5e0c94f2322d67518b711c 348 SUPERFAMILY SSF51905 1 340 2.46E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00778 fd12bef71f5e0c94f2322d67518b711c 348 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 7.2E-7 T 11-10-2018 AMC99_00778 fd12bef71f5e0c94f2322d67518b711c 348 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 7.2E-7 T 11-10-2018 AMC99_00778 fd12bef71f5e0c94f2322d67518b711c 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 4.3E-7 T 11-10-2018 AMC99_00778 fd12bef71f5e0c94f2322d67518b711c 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.3E-7 T 11-10-2018 AMC99_00778 fd12bef71f5e0c94f2322d67518b711c 348 Gene3D G3DSA:3.50.50.60 219 269 5.0E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00778 fd12bef71f5e0c94f2322d67518b711c 348 Gene3D G3DSA:3.40.50.720 1 146 7.5E-14 T 11-10-2018 AMC99_00778 fd12bef71f5e0c94f2322d67518b711c 348 Gene3D G3DSA:3.50.50.60 270 335 5.0E-12 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00778 fd12bef71f5e0c94f2322d67518b711c 348 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 329 3.6E-21 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 Gene3D G3DSA:1.10.540.10 45 160 1.4E-92 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 1.9E-9 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 SUPERFAMILY SSF56645 36 292 9.95E-58 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 SUPERFAMILY SSF47203 288 471 1.05E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 4.7E-16 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 Gene3D G3DSA:2.40.110.10 161 281 1.4E-92 T 11-10-2018 AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 2.4E-10 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 473 594 5.8E-35 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 Gene3D G3DSA:1.20.140.10 282 449 1.4E-92 T 11-10-2018 AMC99_01121 d3b3bb6b4f2bcbded3971deb97432ce3 602 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 2.1E-18 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00354 d8659f26fe9a09363af69c8213b5167c 149 PIRSF PIRSF011386 1 148 1.2E-36 T 11-10-2018 IPR018037 Nitrogen fixation protein FixH, Proteobacterial AMC99_00354 d8659f26fe9a09363af69c8213b5167c 149 Pfam PF05751 FixH 4 146 5.0E-31 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 Gene3D G3DSA:3.20.20.70 1 293 1.6E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 SUPERFAMILY SSF51569 1 292 1.15E-91 T 11-10-2018 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 289 60.336 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 5.5E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 5.5E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 5.5E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 5.5E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 PIRSF PIRSF001365 1 293 1.8E-83 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 SMART SM01130 1 291 1.9E-131 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 289 2.8E-93 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AMC99_01471 e27bdf6be6e6130fdaa8b408451371bf 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 3.0E-78 T 11-10-2018 IPR002220 DapA-like GO:0016829 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 306 1.9E-85 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 Gene3D G3DSA:1.10.8.10 1 56 2.0E-23 T 11-10-2018 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 Pfam PF00889 Elongation factor TS 71 289 7.4E-65 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 Gene3D G3DSA:3.30.479.20 150 288 4.8E-36 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 Gene3D G3DSA:3.30.479.20 57 147 5.3E-25 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 Hamap MF_00050 Elongation factor Ts [tsf]. 1 307 72.944 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 SUPERFAMILY SSF54713 57 289 2.15E-44 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 SUPERFAMILY SSF46934 4 55 8.08E-17 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMC99_00685 338aa2394f41769027b1876fed3f6095 308 Gene3D G3DSA:1.10.286.20 203 247 4.8E-36 T 11-10-2018 AMC99_02421 36e8ea716daaf55fa6f62b0fda3f3ea9 386 Gene3D G3DSA:3.30.1540.10 239 331 1.0E-103 T 11-10-2018 AMC99_02421 36e8ea716daaf55fa6f62b0fda3f3ea9 386 Pfam PF02515 CoA-transferase family III 11 380 2.9E-100 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMC99_02421 36e8ea716daaf55fa6f62b0fda3f3ea9 386 Gene3D G3DSA:3.40.50.10540 11 382 1.0E-103 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_02421 36e8ea716daaf55fa6f62b0fda3f3ea9 386 SUPERFAMILY SSF89796 9 382 3.27E-109 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_02566 62fa64e1874a6140e635cb47fb74c344 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_02566 62fa64e1874a6140e635cb47fb74c344 112 Pfam PF00037 4Fe-4S binding domain 34 55 3.1E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_02566 62fa64e1874a6140e635cb47fb74c344 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 9.0E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AMC99_02566 62fa64e1874a6140e635cb47fb74c344 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 9.0E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AMC99_02566 62fa64e1874a6140e635cb47fb74c344 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 9.0E-18 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AMC99_02566 62fa64e1874a6140e635cb47fb74c344 112 SUPERFAMILY SSF54862 3 103 4.75E-24 T 11-10-2018 AMC99_02566 62fa64e1874a6140e635cb47fb74c344 112 Pfam PF11953 Domain of unknown function (DUF3470) 64 104 2.8E-19 T 11-10-2018 IPR022569 Ferredoxin, C-terminal AMC99_02566 62fa64e1874a6140e635cb47fb74c344 112 Gene3D G3DSA:3.30.70.20 2 100 2.1E-30 T 11-10-2018 AMC99_02404 5719b10eb38e5a95f49dd223c579e381 559 Pfam PF04389 Peptidase family M28 305 517 6.2E-42 T 11-10-2018 IPR007484 Peptidase M28 AMC99_02404 5719b10eb38e5a95f49dd223c579e381 559 Pfam PF02225 PA domain 140 226 8.9E-7 T 11-10-2018 IPR003137 PA domain AMC99_02404 5719b10eb38e5a95f49dd223c579e381 559 SUPERFAMILY SSF53187 36 532 2.43E-54 T 11-10-2018 AMC99_02404 5719b10eb38e5a95f49dd223c579e381 559 Gene3D G3DSA:3.40.630.10 56 507 5.7E-47 T 11-10-2018 AMC99_02404 5719b10eb38e5a95f49dd223c579e381 559 Gene3D G3DSA:3.50.30.30 102 295 5.7E-47 T 11-10-2018 AMC99_02404 5719b10eb38e5a95f49dd223c579e381 559 SUPERFAMILY SSF52025 136 220 1.91E-5 T 11-10-2018 AMC99_01791 29f72b008e02cc07c2f405680c582310 258 SUPERFAMILY SSF55120 6 256 3.45E-79 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01791 29f72b008e02cc07c2f405680c582310 258 PIRSF PIRSF001430 6 258 1.6E-66 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01791 29f72b008e02cc07c2f405680c582310 258 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 9 248 2.5E-49 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01791 29f72b008e02cc07c2f405680c582310 258 Gene3D G3DSA:3.30.70.660 112 257 2.3E-42 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AMC99_01791 29f72b008e02cc07c2f405680c582310 258 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 7 254 31.265 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01791 29f72b008e02cc07c2f405680c582310 258 Gene3D G3DSA:3.30.70.580 4 111 4.9E-28 T 11-10-2018 AMC99_01791 29f72b008e02cc07c2f405680c582310 258 Pfam PF01416 tRNA pseudouridine synthase 13 109 2.0E-7 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01791 29f72b008e02cc07c2f405680c582310 258 Pfam PF01416 tRNA pseudouridine synthase 149 255 1.5E-30 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_00474 903b42633874a6ba76bf8f2772e31d88 560 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 246 261 - T 11-10-2018 IPR019826 Carboxylesterase type B, active site AMC99_00474 903b42633874a6ba76bf8f2772e31d88 560 SUPERFAMILY SSF53474 56 553 4.1E-115 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00474 903b42633874a6ba76bf8f2772e31d88 560 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 147 157 - T 11-10-2018 IPR019819 Carboxylesterase type B, conserved site AMC99_00474 903b42633874a6ba76bf8f2772e31d88 560 Pfam PF00135 Carboxylesterase family 56 547 2.1E-105 T 11-10-2018 IPR002018 Carboxylesterase, type B AMC99_00474 903b42633874a6ba76bf8f2772e31d88 560 Gene3D G3DSA:3.40.50.1820 54 558 3.0E-139 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01220 8b1f51464d1446e0cd3da5199b0a2283 544 Gene3D G3DSA:3.40.50.300 1 284 1.1E-120 T 11-10-2018 AMC99_01220 8b1f51464d1446e0cd3da5199b0a2283 544 Pfam PF00117 Glutamine amidotransferase class-I 301 536 1.9E-54 T 11-10-2018 IPR017926 Glutamine amidotransferase AMC99_01220 8b1f51464d1446e0cd3da5199b0a2283 544 Hamap MF_01227 CTP synthase [pyrG]. 2 541 48.983 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMC99_01220 8b1f51464d1446e0cd3da5199b0a2283 544 SUPERFAMILY SSF52317 289 540 2.29E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01220 8b1f51464d1446e0cd3da5199b0a2283 544 Gene3D G3DSA:3.40.50.880 288 544 1.1E-93 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01220 8b1f51464d1446e0cd3da5199b0a2283 544 Pfam PF06418 CTP synthase N-terminus 3 264 3.6E-119 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMC99_01220 8b1f51464d1446e0cd3da5199b0a2283 544 SUPERFAMILY SSF52540 1 266 2.07E-116 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01220 8b1f51464d1446e0cd3da5199b0a2283 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 6.7E-221 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AMC99_01958 202f60f6314b966f8c6e7a9bba217d66 382 Pfam PF13692 Glycosyl transferases group 1 213 345 1.2E-22 T 11-10-2018 AMC99_01958 202f60f6314b966f8c6e7a9bba217d66 382 Gene3D G3DSA:3.40.50.2000 204 360 9.4E-34 T 11-10-2018 AMC99_01958 202f60f6314b966f8c6e7a9bba217d66 382 SUPERFAMILY SSF53756 8 377 3.14E-40 T 11-10-2018 AMC99_00575 e7496241c1819a9e60dfba739d5a483e 123 Pfam PF02152 Dihydroneopterin aldolase 8 118 1.8E-16 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMC99_00575 e7496241c1819a9e60dfba739d5a483e 123 Gene3D G3DSA:3.30.1130.10 2 123 6.6E-18 T 11-10-2018 AMC99_00575 e7496241c1819a9e60dfba739d5a483e 123 SMART SM00905 7 120 2.1E-16 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMC99_00575 e7496241c1819a9e60dfba739d5a483e 123 SUPERFAMILY SSF55620 7 122 1.39E-16 T 11-10-2018 AMC99_00575 e7496241c1819a9e60dfba739d5a483e 123 TIGRFAM TIGR00526 folB_dom: FolB domain 7 123 1.6E-13 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 Pfam PF08245 Mur ligase middle domain 120 312 1.9E-42 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 Pfam PF01225 Mur ligase family, catalytic domain 41 90 1.8E-11 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 SUPERFAMILY SSF53244 338 479 2.29E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 SUPERFAMILY SSF63418 21 111 1.07E-24 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 Gene3D G3DSA:3.40.1190.10 96 329 2.0E-55 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 Gene3D G3DSA:3.90.190.20 337 483 1.4E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 46 479 1.1E-109 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 Gene3D G3DSA:3.40.1390.10 3 95 1.9E-23 T 11-10-2018 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 Pfam PF02875 Mur ligase family, glutamate ligase domain 347 419 2.1E-11 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 22 480 31.5 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01869 904ddcc0ea0328aade0ca81909da5aa7 484 SUPERFAMILY SSF53623 117 330 4.45E-43 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01147 28f596016986ac1aa7dfb9e78ead77ea 276 Pfam PF00589 Phage integrase family 110 258 7.4E-32 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_01147 28f596016986ac1aa7dfb9e78ead77ea 276 Gene3D G3DSA:1.10.443.10 93 265 3.9E-44 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMC99_01147 28f596016986ac1aa7dfb9e78ead77ea 276 Gene3D G3DSA:1.10.150.130 1 83 1.0E-6 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMC99_01147 28f596016986ac1aa7dfb9e78ead77ea 276 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 2 64 1.7E-6 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMC99_01147 28f596016986ac1aa7dfb9e78ead77ea 276 SUPERFAMILY SSF56349 82 270 5.59E-45 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 7.6E-13 T 11-10-2018 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 7.6E-13 T 11-10-2018 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 162 175 7.6E-13 T 11-10-2018 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 75 86 7.0E-36 T 11-10-2018 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 162 175 7.0E-36 T 11-10-2018 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 7.0E-36 T 11-10-2018 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 7.0E-36 T 11-10-2018 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 7.0E-36 T 11-10-2018 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 7.0E-36 T 11-10-2018 AMC99_01227 686a6c5af0e694249502ffc132f92114 194 Pfam PF00117 Glutamine amidotransferase class-I 3 183 1.4E-50 T 11-10-2018 IPR017926 Glutamine amidotransferase AMC99_01227 686a6c5af0e694249502ffc132f92114 194 SUPERFAMILY SSF52317 1 186 1.99E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01227 686a6c5af0e694249502ffc132f92114 194 Gene3D G3DSA:3.40.50.880 1 192 7.2E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01227 686a6c5af0e694249502ffc132f92114 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 184 6.9E-63 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 AMC99_00891 6c51eec410a9c1299cbedb1925ce2c9a 392 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 139 346 4.8E-7 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMC99_00891 6c51eec410a9c1299cbedb1925ce2c9a 392 Gene3D G3DSA:2.40.37.10 19 387 5.7E-136 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_00891 6c51eec410a9c1299cbedb1925ce2c9a 392 PIRSF PIRSF038941 9 392 1.0E-149 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 AMC99_00891 6c51eec410a9c1299cbedb1925ce2c9a 392 SUPERFAMILY SSF50621 230 380 2.05E-25 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_00891 6c51eec410a9c1299cbedb1925ce2c9a 392 SUPERFAMILY SSF51419 27 263 1.89E-40 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_00891 6c51eec410a9c1299cbedb1925ce2c9a 392 Gene3D G3DSA:3.20.20.10 28 260 5.7E-136 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_01865 d94cbc51832c0ae7630831ef6d9af8c1 407 Gene3D G3DSA:3.40.50.2000 172 353 2.7E-96 T 11-10-2018 AMC99_01865 d94cbc51832c0ae7630831ef6d9af8c1 407 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 13 369 31.092 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01865 d94cbc51832c0ae7630831ef6d9af8c1 407 SUPERFAMILY SSF53756 12 368 8.25E-96 T 11-10-2018 AMC99_01865 d94cbc51832c0ae7630831ef6d9af8c1 407 Gene3D G3DSA:3.40.50.2000 14 359 2.7E-96 T 11-10-2018 AMC99_01865 d94cbc51832c0ae7630831ef6d9af8c1 407 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 14 364 3.7E-84 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01865 d94cbc51832c0ae7630831ef6d9af8c1 407 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 360 8.6E-42 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMC99_01865 d94cbc51832c0ae7630831ef6d9af8c1 407 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 14 148 4.0E-30 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_00831 2cf5388a5c987d0551aa6fa0d6f25ef7 101 SMART SM00418 3 81 1.2E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00831 2cf5388a5c987d0551aa6fa0d6f25ef7 101 Gene3D G3DSA:1.10.10.10 1 89 3.0E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00831 2cf5388a5c987d0551aa6fa0d6f25ef7 101 Pfam PF12840 Helix-turn-helix domain 4 57 3.4E-14 T 11-10-2018 AMC99_00831 2cf5388a5c987d0551aa6fa0d6f25ef7 101 SUPERFAMILY SSF46785 3 78 4.02E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00831 2cf5388a5c987d0551aa6fa0d6f25ef7 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 3.6E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00831 2cf5388a5c987d0551aa6fa0d6f25ef7 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 3.6E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00831 2cf5388a5c987d0551aa6fa0d6f25ef7 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 3.6E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_01300 bc5c0c31f7f272b7c368a7b3f835d40f 214 Gene3D G3DSA:3.30.1950.10 52 119 2.7E-11 T 11-10-2018 AMC99_01300 bc5c0c31f7f272b7c368a7b3f835d40f 214 Pfam PF02563 Polysaccharide biosynthesis/export protein 45 117 7.4E-20 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMC99_01300 bc5c0c31f7f272b7c368a7b3f835d40f 214 Gene3D G3DSA:3.10.560.10 120 211 1.1E-16 T 11-10-2018 AMC99_01849 2019909531cb28698c86d9027475e96a 360 Pfam PF01926 50S ribosome-binding GTPase 164 286 4.4E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01849 2019909531cb28698c86d9027475e96a 360 Gene3D G3DSA:2.70.210.12 2 161 1.6E-54 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AMC99_01849 2019909531cb28698c86d9027475e96a 360 Hamap MF_01454 GTPase Obg [obg]. 5 333 45.113 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMC99_01849 2019909531cb28698c86d9027475e96a 360 Pfam PF01018 GTP1/OBG 8 161 4.4E-56 T 11-10-2018 IPR006169 GTP1/OBG domain AMC99_01849 2019909531cb28698c86d9027475e96a 360 SUPERFAMILY SSF82051 5 161 2.09E-53 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AMC99_01849 2019909531cb28698c86d9027475e96a 360 PIRSF PIRSF002401 3 358 1.1E-129 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type AMC99_01849 2019909531cb28698c86d9027475e96a 360 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 164 328 1.6E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_01849 2019909531cb28698c86d9027475e96a 360 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 165 185 4.5E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01849 2019909531cb28698c86d9027475e96a 360 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 4.5E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01849 2019909531cb28698c86d9027475e96a 360 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 186 204 4.5E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01849 2019909531cb28698c86d9027475e96a 360 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 213 228 4.5E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01849 2019909531cb28698c86d9027475e96a 360 SUPERFAMILY SSF52540 154 347 1.29E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01849 2019909531cb28698c86d9027475e96a 360 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 6 331 2.2E-136 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMC99_01849 2019909531cb28698c86d9027475e96a 360 ProSitePatterns PS00905 GTP1/OBG family signature. 215 228 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AMC99_01849 2019909531cb28698c86d9027475e96a 360 Gene3D G3DSA:3.40.50.300 162 345 5.3E-53 T 11-10-2018 AMC99_01630 abc432d58d4dc03d04ae0ce489481c73 1140 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1124 1.9E-54 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMC99_01630 abc432d58d4dc03d04ae0ce489481c73 1140 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1133 20.199 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMC99_01630 abc432d58d4dc03d04ae0ce489481c73 1140 Gene3D G3DSA:3.40.50.300 977 1140 1.8E-43 T 11-10-2018 AMC99_01630 abc432d58d4dc03d04ae0ce489481c73 1140 Gene3D G3DSA:3.40.50.300 2 270 1.2E-45 T 11-10-2018 AMC99_01630 abc432d58d4dc03d04ae0ce489481c73 1140 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1131 7.4E-239 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMC99_01630 abc432d58d4dc03d04ae0ce489481c73 1140 PIRSF PIRSF005719 555 1140 3.2E-99 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein AMC99_01630 abc432d58d4dc03d04ae0ce489481c73 1140 PIRSF PIRSF005719 1 541 1.0E-104 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein AMC99_01630 abc432d58d4dc03d04ae0ce489481c73 1140 SUPERFAMILY SSF52540 1 1131 4.59E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 SUPERFAMILY SSF51735 19 213 3.15E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 222 308 3.5E-28 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 Gene3D G3DSA:3.40.50.720 220 429 4.6E-60 T 11-10-2018 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 PIRSF PIRSF500136 11 429 3.8E-143 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 SMART SM00984 331 429 4.0E-24 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 19 203 2.1E-49 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 331 428 3.2E-20 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 19 424 5.8E-121 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 PIRSF PIRSF000124 18 429 1.0E-78 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 Gene3D G3DSA:3.40.50.720 13 219 1.0E-60 T 11-10-2018 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 SUPERFAMILY SSF52413 322 427 9.02E-25 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AMC99_00184 20406a1a1c3f40b1e51b9f5c3f3fe494 429 SUPERFAMILY SSF48179 221 312 1.21E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_01357 be18c18336d81f9e8240feaf137ceb28 276 SMART SM00849 37 228 8.4E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_01357 be18c18336d81f9e8240feaf137ceb28 276 Pfam PF00753 Metallo-beta-lactamase superfamily 35 173 4.1E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_01357 be18c18336d81f9e8240feaf137ceb28 276 Gene3D G3DSA:3.60.15.10 8 276 1.4E-82 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_01357 be18c18336d81f9e8240feaf137ceb28 276 SUPERFAMILY SSF56281 20 230 5.37E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_02682 09d7cea9ab78d676ad9df1ad807455a0 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 112 213 4.8E-33 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMC99_01572 7e3262545d6276d00e29e5b43db100dd 290 Gene3D G3DSA:1.25.40.10 20 191 2.1E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01572 7e3262545d6276d00e29e5b43db100dd 290 SMART SM00028 80 113 1.3E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_01572 7e3262545d6276d00e29e5b43db100dd 290 SUPERFAMILY SSF48452 52 122 1.98E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01943 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Gene3D G3DSA:3.60.20.10 48 720 3.2E-169 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_01943 867b302c5feb56bdf3a0a5a6c7b27ee2 742 SUPERFAMILY SSF56235 37 739 1.14E-152 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_01943 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Pfam PF01804 Penicillin amidase 44 729 9.7E-112 T 11-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 AMC99_01943 867b302c5feb56bdf3a0a5a6c7b27ee2 742 PIRSF PIRSF001227 603 741 1.1E-9 T 11-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AMC99_01943 867b302c5feb56bdf3a0a5a6c7b27ee2 742 PIRSF PIRSF001227 195 618 3.7E-73 T 11-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AMC99_01943 867b302c5feb56bdf3a0a5a6c7b27ee2 742 PIRSF PIRSF001227 6 162 2.4E-30 T 11-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 AMC99_01943 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Gene3D G3DSA:1.10.1400.10 535 668 3.2E-169 T 11-10-2018 AMC99_01943 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Gene3D G3DSA:2.30.120.10 303 377 3.2E-169 T 11-10-2018 AMC99_01943 867b302c5feb56bdf3a0a5a6c7b27ee2 742 Gene3D G3DSA:1.10.439.10 78 232 3.2E-169 T 11-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 AMC99_02642 53d1942ec7a6fceb863c84b9d8ea464f 231 Pfam PF00691 OmpA family 113 208 8.8E-24 T 11-10-2018 IPR006665 OmpA-like domain AMC99_02642 53d1942ec7a6fceb863c84b9d8ea464f 231 SUPERFAMILY SSF103088 105 216 3.79E-35 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_02642 53d1942ec7a6fceb863c84b9d8ea464f 231 Gene3D G3DSA:3.30.1330.60 76 221 5.9E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_02642 53d1942ec7a6fceb863c84b9d8ea464f 231 Pfam PF05433 Glycine zipper 2TM domain 38 78 3.5E-7 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AMC99_02642 53d1942ec7a6fceb863c84b9d8ea464f 231 ProSitePatterns PS01068 OmpA-like domain. 146 190 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMC99_02642 53d1942ec7a6fceb863c84b9d8ea464f 231 PRINTS PR01021 OMPA domain signature 144 159 1.6E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_02642 53d1942ec7a6fceb863c84b9d8ea464f 231 PRINTS PR01021 OMPA domain signature 159 175 1.6E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_02642 53d1942ec7a6fceb863c84b9d8ea464f 231 PRINTS PR01021 OMPA domain signature 114 136 1.6E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 348 367 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 Pfam PF04552 Sigma-54, DNA binding domain 301 458 5.0E-65 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 Pfam PF04963 Sigma-54 factor, core binding domain 100 286 3.2E-49 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 PRINTS PR00045 Sigma-54 factor signature 172 189 1.2E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 PRINTS PR00045 Sigma-54 factor signature 376 387 1.2E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 PRINTS PR00045 Sigma-54 factor signature 360 372 1.2E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 PRINTS PR00045 Sigma-54 factor signature 433 451 1.2E-27 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 438 445 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 Gene3D G3DSA:1.10.10.1330 106 233 6.4E-22 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 1 35 2.6E-12 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 1 457 2.1E-124 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 Gene3D G3DSA:1.10.10.60 400 457 2.1E-19 T 11-10-2018 AMC99_02768 8495fef6962bf531efe68779d2a6ccab 465 PIRSF PIRSF000774 1 460 8.7E-142 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 AMC99_01966 88c2c73f8318765e0f21ad37a13c34c6 215 SUPERFAMILY SSF56784 1 215 3.44E-52 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_01966 88c2c73f8318765e0f21ad37a13c34c6 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 186 2.0E-30 T 11-10-2018 AMC99_01966 88c2c73f8318765e0f21ad37a13c34c6 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 179 1.2E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMC99_01966 88c2c73f8318765e0f21ad37a13c34c6 215 Gene3D G3DSA:1.10.150.240 17 83 1.4E-50 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMC99_01966 88c2c73f8318765e0f21ad37a13c34c6 215 Gene3D G3DSA:3.40.50.1000 6 204 1.4E-50 T 11-10-2018 IPR023214 HAD superfamily AMC99_01966 88c2c73f8318765e0f21ad37a13c34c6 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 186 1.9E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMC99_02137 441a4241aad003b955fce3a53e9d8a37 185 SMART SM00248 78 107 0.0037 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMC99_02137 441a4241aad003b955fce3a53e9d8a37 185 SMART SM00248 111 140 0.35 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMC99_02137 441a4241aad003b955fce3a53e9d8a37 185 SMART SM00248 45 74 0.11 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMC99_02137 441a4241aad003b955fce3a53e9d8a37 185 Gene3D G3DSA:1.25.40.20 4 181 1.5E-37 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMC99_02137 441a4241aad003b955fce3a53e9d8a37 185 Pfam PF00023 Ankyrin repeat 112 143 0.028 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AMC99_02137 441a4241aad003b955fce3a53e9d8a37 185 SUPERFAMILY SSF48403 27 153 1.15E-31 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMC99_02137 441a4241aad003b955fce3a53e9d8a37 185 Pfam PF12796 Ankyrin repeats (3 copies) 26 109 2.2E-12 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AMC99_00589 9ed80466a88c973be9e2d64bf88690d1 347 SUPERFAMILY SSF51556 3 345 3.58E-146 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_00589 9ed80466a88c973be9e2d64bf88690d1 347 Hamap MF_00219 Dihydroorotase [pyrC]. 3 346 47.317 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_00589 9ed80466a88c973be9e2d64bf88690d1 347 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 345 4.2E-142 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_00589 9ed80466a88c973be9e2d64bf88690d1 347 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_00589 9ed80466a88c973be9e2d64bf88690d1 347 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_00589 9ed80466a88c973be9e2d64bf88690d1 347 PIRSF PIRSF001237 1 347 6.9E-141 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_00589 9ed80466a88c973be9e2d64bf88690d1 347 Gene3D G3DSA:3.20.20.140 3 347 2.4E-111 T 11-10-2018 AMC99_00589 9ed80466a88c973be9e2d64bf88690d1 347 Pfam PF01979 Amidohydrolase family 12 303 8.6E-21 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 196 5.5E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 212 5.5E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 224 5.5E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 ProSitePatterns PS00622 LuxR-type HTH domain signature. 196 223 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 Gene3D G3DSA:1.10.10.10 180 250 1.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 Gene3D G3DSA:3.30.450.80 12 172 2.1E-10 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 Pfam PF03472 Autoinducer binding domain 27 165 1.0E-15 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 SMART SM00421 179 236 1.2E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 SUPERFAMILY SSF46894 176 242 1.09E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 SUPERFAMILY SSF75516 10 172 9.55E-18 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMC99_02671 8d931f10f1d4211a4cc0e983c9876c80 259 Pfam PF00196 Bacterial regulatory proteins, luxR family 182 236 3.0E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_01388 7aa62598552794677910e90887b6d012 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 6 75 1.1E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_01388 7aa62598552794677910e90887b6d012 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 140 196 5.7E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMC99_01388 7aa62598552794677910e90887b6d012 212 Gene3D G3DSA:1.20.1050.10 84 195 4.8E-37 T 11-10-2018 AMC99_01388 7aa62598552794677910e90887b6d012 212 SUPERFAMILY SSF47616 91 203 1.81E-20 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_01388 7aa62598552794677910e90887b6d012 212 SUPERFAMILY SSF52833 5 82 8.7E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01388 7aa62598552794677910e90887b6d012 212 Gene3D G3DSA:3.40.30.10 7 200 4.8E-37 T 11-10-2018 AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 PIRSF PIRSF006487 3 374 1.8E-83 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 SUPERFAMILY SSF101790 291 374 7.52E-28 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 14 369 9.8E-103 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 Gene3D G3DSA:3.30.70.1400 62 145 2.4E-78 T 11-10-2018 AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 SUPERFAMILY SSF103025 14 289 1.16E-84 T 11-10-2018 AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 Pfam PF01571 Aminomethyltransferase folate-binding domain 17 261 2.2E-84 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 Gene3D G3DSA:3.30.1360.120 14 241 2.4E-78 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 Gene3D G3DSA:2.40.30.110 288 370 1.3E-27 T 11-10-2018 AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 273 364 6.6E-26 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 AMC99_00337 3df65a509cd9b093b39d9e58c6a464bd 376 Gene3D G3DSA:4.10.1250.10 242 286 3.4E-16 T 11-10-2018 AMC99_02668 e9748e47eecf22138d68484d8dbe52a1 627 Gene3D G3DSA:3.40.50.720 402 507 3.4E-10 T 11-10-2018 AMC99_02668 e9748e47eecf22138d68484d8dbe52a1 627 Pfam PF00999 Sodium/hydrogen exchanger family 13 390 1.2E-37 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMC99_02668 e9748e47eecf22138d68484d8dbe52a1 627 Pfam PF02254 TrkA-N domain 406 485 7.9E-8 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMC99_02668 e9748e47eecf22138d68484d8dbe52a1 627 SUPERFAMILY SSF51735 405 485 1.1E-7 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02668 e9748e47eecf22138d68484d8dbe52a1 627 Gene3D G3DSA:1.20.1530.20 3 395 3.2E-19 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMC99_00662 27006ab197130c2957b0567ba613a744 225 Gene3D G3DSA:1.10.10.10 120 222 4.9E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00662 27006ab197130c2957b0567ba613a744 225 SMART SM00448 1 112 3.2E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00662 27006ab197130c2957b0567ba613a744 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.8E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00662 27006ab197130c2957b0567ba613a744 225 Pfam PF00072 Response regulator receiver domain 3 112 7.9E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00662 27006ab197130c2957b0567ba613a744 225 SMART SM00862 145 216 1.2E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00662 27006ab197130c2957b0567ba613a744 225 SUPERFAMILY SSF52172 1 118 1.35E-37 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_00662 27006ab197130c2957b0567ba613a744 225 SUPERFAMILY SSF46894 119 217 3.12E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_00662 27006ab197130c2957b0567ba613a744 225 Gene3D G3DSA:3.40.50.2300 1 119 1.7E-41 T 11-10-2018 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 2.5E-28 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 211 2.5E-28 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 222 234 2.5E-28 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 168 183 2.5E-28 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 Pfam PF00579 tRNA synthetases class I (W and Y) 39 327 3.1E-72 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 403 2.1E-109 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 Gene3D G3DSA:1.10.240.10 229 334 4.8E-33 T 11-10-2018 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 Gene3D G3DSA:3.40.50.620 1 228 4.7E-86 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 Gene3D G3DSA:3.10.290.10 335 407 9.6E-11 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 409 39.924 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 SUPERFAMILY SSF52374 7 327 1.61E-96 T 11-10-2018 AMC99_01127 473ff557a93109e1bb17b9794c4942e8 409 SUPERFAMILY SSF55174 318 408 1.96E-14 T 11-10-2018 AMC99_00286 c66de021b971453a94612c93f511a21d 296 Pfam PF13354 Beta-lactamase enzyme family 54 264 1.7E-30 T 11-10-2018 AMC99_00286 c66de021b971453a94612c93f511a21d 296 SUPERFAMILY SSF56601 34 279 4.23E-55 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_00286 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 142 166 7.2E-47 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_00286 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 204 219 7.2E-47 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_00286 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 221 236 7.2E-47 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_00286 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 168 193 7.2E-47 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_00286 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 106 131 7.2E-47 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_00286 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 33 57 7.2E-47 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_00286 c66de021b971453a94612c93f511a21d 296 PRINTS PR00118 Beta-lactamase class A signature 64 81 7.2E-47 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_00286 c66de021b971453a94612c93f511a21d 296 Gene3D G3DSA:3.40.710.10 29 294 4.0E-60 T 11-10-2018 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 PIRSF PIRSF016578 225 394 8.7E-10 T 11-10-2018 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 PIRSF PIRSF016578 6 204 2.3E-10 T 11-10-2018 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 SUPERFAMILY SSF56645 13 252 6.68E-61 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 Gene3D G3DSA:1.10.540.10 7 123 3.3E-26 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 Gene3D G3DSA:1.20.140.10 245 388 8.4E-40 T 11-10-2018 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 SUPERFAMILY SSF47203 238 393 3.87E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 Gene3D G3DSA:2.40.110.10 127 244 5.6E-34 T 11-10-2018 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 373 2.2E-36 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 227 5.7E-22 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 123 4.0E-23 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_01212 4c716ebfb61d267d5c495ea51ba74bbb 395 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 SMART SM00671 287 323 0.5 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 SMART SM00671 360 395 1.1E-4 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 SMART SM00671 324 359 19.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 SMART SM00671 109 144 130.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 SUPERFAMILY SSF81901 92 152 7.46E-5 T 11-10-2018 AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 Gene3D G3DSA:1.25.40.10 48 161 4.5E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 Gene3D G3DSA:1.25.40.10 243 449 4.7E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 SUPERFAMILY SSF81901 256 431 7.32E-19 T 11-10-2018 AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 Pfam PF08238 Sel1 repeat 291 323 0.55 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 Pfam PF08238 Sel1 repeat 326 359 0.23 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 Pfam PF08238 Sel1 repeat 367 394 4.5E-4 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00115 3e52c1ff26a9cc7a3c487e333d96a061 452 Pfam PF08238 Sel1 repeat 126 144 0.38 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 Gene3D G3DSA:1.20.272.10 322 440 4.5E-18 T 11-10-2018 AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 312 451 1.8E-45 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 483 592 5.1E-28 T 11-10-2018 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 SUPERFAMILY SSF52540 104 298 3.12E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 SMART SM00382 108 255 1.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 74 436 2.3E-127 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 SUPERFAMILY SSF48019 323 446 7.91E-27 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 Pfam PF13177 DNA polymerase III, delta subunit 91 253 4.7E-38 T 11-10-2018 AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 Gene3D G3DSA:1.10.8.60 79 318 1.1E-101 T 11-10-2018 AMC99_00671 a2c5aeeb8bb08c73b5103c824b8836fa 608 Gene3D G3DSA:3.40.50.300 84 253 1.1E-101 T 11-10-2018 AMC99_02062 704004abbeffb460061e979deb45d688 114 Gene3D G3DSA:3.40.30.10 1 114 3.5E-38 T 11-10-2018 AMC99_02062 704004abbeffb460061e979deb45d688 114 SUPERFAMILY SSF52833 4 114 1.01E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02062 704004abbeffb460061e979deb45d688 114 Pfam PF03960 ArsC family 70 113 1.0E-10 T 11-10-2018 IPR006660 Arsenate reductase-like AMC99_00272 3a358a4688ccc07b86910081103a2cb1 136 Gene3D G3DSA:3.40.250.10 34 135 8.3E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_00272 3a358a4688ccc07b86910081103a2cb1 136 Pfam PF00581 Rhodanese-like domain 39 129 8.7E-15 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_00272 3a358a4688ccc07b86910081103a2cb1 136 SUPERFAMILY SSF52821 34 135 5.89E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_00272 3a358a4688ccc07b86910081103a2cb1 136 SMART SM00450 37 132 2.5E-20 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_02178 e6d705e6fb8a914f31c8fc1dbfa318b6 876 Pfam PF00593 TonB dependent receptor 454 873 5.3E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02178 e6d705e6fb8a914f31c8fc1dbfa318b6 876 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 160 1.7E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_02178 e6d705e6fb8a914f31c8fc1dbfa318b6 876 Gene3D G3DSA:2.170.130.10 27 168 7.9E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02178 e6d705e6fb8a914f31c8fc1dbfa318b6 876 SUPERFAMILY SSF56935 29 876 2.85E-108 T 11-10-2018 AMC99_01676 67b9a20143bd8e0e99a11dd545c76d83 343 Gene3D G3DSA:3.40.366.20 2 339 4.1E-26 T 11-10-2018 AMC99_01676 67b9a20143bd8e0e99a11dd545c76d83 343 SUPERFAMILY SSF52151 5 308 7.32E-31 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMC99_01676 67b9a20143bd8e0e99a11dd545c76d83 343 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 313 4.7E-4 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 389 411 7.4E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 458 478 7.4E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 232 251 7.4E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 111 133 7.4E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 204 222 7.4E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 PRINTS PR00175 Sodium/alanine symporter signature 327 345 7.4E-49 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 TIGRFAM TIGR00835 agcS: amino acid carrier protein 40 486 2.1E-128 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 PIRSF PIRSF006060 61 493 8.8E-12 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 Pfam PF01235 Sodium:alanine symporter family 74 487 5.6E-130 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_02196 1d8002be8a5bcd2cec28f23d37934aea 507 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 111 126 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMC99_00432 4942a7d15a5f7fea717a63ccaefa32b6 246 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 6 237 8.5E-77 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AMC99_00432 4942a7d15a5f7fea717a63ccaefa32b6 246 Gene3D G3DSA:3.20.20.70 3 242 9.8E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00432 4942a7d15a5f7fea717a63ccaefa32b6 246 Pfam PF00977 Histidine biosynthesis protein 6 233 2.0E-72 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AMC99_00432 4942a7d15a5f7fea717a63ccaefa32b6 246 SUPERFAMILY SSF51366 5 239 1.81E-69 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMC99_00432 4942a7d15a5f7fea717a63ccaefa32b6 246 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 241 35.424 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 AMC99_01150 d5852872534d580505051dae23eeff09 211 SUPERFAMILY SSF52972 10 206 1.26E-62 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_01150 d5852872534d580505051dae23eeff09 211 Gene3D G3DSA:3.90.950.10 9 209 7.6E-65 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_01150 d5852872534d580505051dae23eeff09 211 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 12 205 9.8E-50 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AMC99_01150 d5852872534d580505051dae23eeff09 211 Pfam PF01725 Ham1 family 12 206 3.2E-52 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 AMC99_01150 d5852872534d580505051dae23eeff09 211 Hamap MF_01405 dITP/XTP pyrophosphatase. 10 210 44.485 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 AMC99_00424 38aa287236e813a3043c48c927df429f 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 223 3.3E-17 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00424 38aa287236e813a3043c48c927df429f 393 Gene3D G3DSA:1.20.140.10 246 393 1.3E-22 T 11-10-2018 AMC99_00424 38aa287236e813a3043c48c927df429f 393 Gene3D G3DSA:2.40.110.10 130 245 2.9E-29 T 11-10-2018 AMC99_00424 38aa287236e813a3043c48c927df429f 393 Gene3D G3DSA:1.10.540.10 2 125 9.2E-31 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00424 38aa287236e813a3043c48c927df429f 393 SUPERFAMILY SSF47203 241 391 2.09E-12 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00424 38aa287236e813a3043c48c927df429f 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 126 3.0E-19 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00424 38aa287236e813a3043c48c927df429f 393 SUPERFAMILY SSF56645 3 254 2.23E-64 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00424 38aa287236e813a3043c48c927df429f 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 388 4.2E-15 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 Pfam PF02867 Ribonucleotide reductase, barrel domain 494 639 4.1E-34 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 239 258 1.6E-16 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 350 361 1.6E-16 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 429 451 1.6E-16 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 457 480 1.6E-16 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 SUPERFAMILY SSF48168 83 161 7.72E-17 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 Pfam PF02867 Ribonucleotide reductase, barrel domain 166 485 2.9E-76 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 Gene3D G3DSA:3.20.70.20 39 650 2.5E-176 T 11-10-2018 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 SUPERFAMILY SSF51998 165 649 6.1E-137 T 11-10-2018 AMC99_02287 c50e31b3274f56e33edbedee41358428 683 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 97 162 6.6E-14 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 Gene3D G3DSA:3.40.50.300 14 207 1.7E-42 T 11-10-2018 AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 Pfam PF08494 DEAD/H associated 594 774 3.5E-42 T 11-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 8 799 0.0 T 11-10-2018 IPR026362 DEXH box helicase, DNA ligase-associated AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 PIRSF PIRSF037307 3 807 3.6E-173 T 11-10-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 SMART SM00487 16 229 8.1E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 SUPERFAMILY SSF52540 33 364 1.47E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 Pfam PF00271 Helicase conserved C-terminal domain 250 351 2.5E-13 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 SMART SM00490 274 356 1.1E-13 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 Pfam PF00270 DEAD/DEAH box helicase 22 195 5.8E-22 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_02677 3c0b69fbbff0cd94bbae264366c9320d 817 Gene3D G3DSA:3.40.50.300 244 385 6.5E-24 T 11-10-2018 AMC99_00553 5285c715dc2d83f2fb61b9fd91fa70d6 150 SUPERFAMILY SSF54637 9 144 6.91E-21 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00553 5285c715dc2d83f2fb61b9fd91fa70d6 150 Gene3D G3DSA:3.10.129.10 10 147 5.7E-43 T 11-10-2018 AMC99_00553 5285c715dc2d83f2fb61b9fd91fa70d6 150 Pfam PF03061 Thioesterase superfamily 62 129 3.6E-7 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_00404 87b69b9159456cfcc8d901af94d3d87d 269 PIRSF PIRSF006157 1 244 2.3E-78 T 11-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 AMC99_00404 87b69b9159456cfcc8d901af94d3d87d 269 SUPERFAMILY SSF53213 1 242 1.83E-82 T 11-10-2018 AMC99_00404 87b69b9159456cfcc8d901af94d3d87d 269 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 14 241 2.4E-35 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 AMC99_00404 87b69b9159456cfcc8d901af94d3d87d 269 Gene3D G3DSA:3.40.830.10 1 243 8.0E-83 T 11-10-2018 AMC99_01779 18f1e4538becf60578df72d15ffc6191 143 Pfam PF07475 HPr Serine kinase C-terminal domain 13 82 3.6E-14 T 11-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 AMC99_01779 18f1e4538becf60578df72d15ffc6191 143 Gene3D G3DSA:3.40.50.300 10 139 6.8E-24 T 11-10-2018 AMC99_01779 18f1e4538becf60578df72d15ffc6191 143 SUPERFAMILY SSF53795 7 118 2.72E-18 T 11-10-2018 AMC99_01965 a655bd1af46738be8ddf89e51b0fe52e 199 SUPERFAMILY SSF50475 11 177 6.98E-25 T 11-10-2018 AMC99_01965 a655bd1af46738be8ddf89e51b0fe52e 199 Gene3D G3DSA:2.30.110.10 2 198 2.5E-47 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMC99_01965 a655bd1af46738be8ddf89e51b0fe52e 199 PIRSF PIRSF010372 1 199 6.4E-39 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type AMC99_01965 a655bd1af46738be8ddf89e51b0fe52e 199 Pfam PF04299 Putative FMN-binding domain 1 158 1.6E-36 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type AMC99_00122 f3af93ce0644021989af46fcfeab8f62 92 SUPERFAMILY SSF51197 5 92 5.49E-23 T 11-10-2018 AMC99_00122 f3af93ce0644021989af46fcfeab8f62 92 Pfam PF09313 Domain of unknown function (DUF1971) 15 88 2.3E-19 T 11-10-2018 IPR015392 Domain of unknown function DUF1971 AMC99_00122 f3af93ce0644021989af46fcfeab8f62 92 Gene3D G3DSA:2.60.120.10 2 92 6.3E-26 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_02497 6f48d03e169118140da84efcaf972bb6 178 Gene3D G3DSA:3.40.960.10 34 143 6.6E-15 T 11-10-2018 AMC99_02497 6f48d03e169118140da84efcaf972bb6 178 Pfam PF04480 Protein of unknown function (DUF559) 37 138 2.9E-15 T 11-10-2018 IPR007569 Protein of unknown function DUF559 AMC99_02267 8a8c3dc3daa32883a145b9bb833d09dd 260 Gene3D G3DSA:3.10.129.90 6 253 7.6E-42 T 11-10-2018 AMC99_02267 8a8c3dc3daa32883a145b9bb833d09dd 260 SUPERFAMILY SSF54637 122 253 1.23E-15 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_02267 8a8c3dc3daa32883a145b9bb833d09dd 260 Pfam PF13622 Thioesterase-like superfamily 33 252 1.7E-21 T 11-10-2018 AMC99_02267 8a8c3dc3daa32883a145b9bb833d09dd 260 SUPERFAMILY SSF54637 17 115 1.38E-7 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_02000 dd3cc18401c9a939420fdd852e032075 390 SUPERFAMILY SSF52540 29 368 2.67E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02000 dd3cc18401c9a939420fdd852e032075 390 Gene3D G3DSA:1.10.8.60 281 389 1.1E-38 T 11-10-2018 AMC99_02000 dd3cc18401c9a939420fdd852e032075 390 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 282 353 3.4E-15 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMC99_02000 dd3cc18401c9a939420fdd852e032075 390 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 1 380 48.143 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMC99_02000 dd3cc18401c9a939420fdd852e032075 390 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 374 5.2E-186 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMC99_02000 dd3cc18401c9a939420fdd852e032075 390 Pfam PF07724 AAA domain (Cdc48 subfamily) 79 276 2.9E-50 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_02000 dd3cc18401c9a939420fdd852e032075 390 Gene3D G3DSA:3.40.50.300 25 280 6.4E-108 T 11-10-2018 AMC99_02000 dd3cc18401c9a939420fdd852e032075 390 SMART SM00382 78 303 1.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02000 dd3cc18401c9a939420fdd852e032075 390 SMART SM01086 282 377 4.7E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AMC99_00989 4939edf3d3ad88189322968473b11ae2 210 Gene3D G3DSA:3.20.20.70 4 209 3.2E-55 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00989 4939edf3d3ad88189322968473b11ae2 210 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 199 4.7E-54 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMC99_00989 4939edf3d3ad88189322968473b11ae2 210 SUPERFAMILY SSF51391 6 200 1.57E-57 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMC99_00989 4939edf3d3ad88189322968473b11ae2 210 Pfam PF02581 Thiamine monophosphate synthase 9 191 2.4E-52 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMC99_00989 4939edf3d3ad88189322968473b11ae2 210 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 208 22.834 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 Gene3D G3DSA:3.40.50.920 540 663 1.6E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 SUPERFAMILY SSF52518 5 314 6.15E-111 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 SUPERFAMILY SSF52518 341 523 1.91E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 315 1.3E-131 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 Gene3D G3DSA:3.40.50.970 4 324 3.4E-112 T 11-10-2018 AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 Pfam PF02779 Transketolase, pyrimidine binding domain 350 521 2.9E-46 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 SUPERFAMILY SSF52922 537 665 6.67E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 ProSitePatterns PS00801 Transketolase signature 1. 16 36 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 Pfam PF02780 Transketolase, C-terminal domain 551 656 1.5E-12 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 Gene3D G3DSA:3.40.50.970 330 527 2.0E-75 T 11-10-2018 AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 SMART SM00861 351 522 2.4E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_00982 d7ad477b8a75437a9f75da97f86e206a 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 662 1.0E-246 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 SUPERFAMILY SSF55785 606 716 3.77E-8 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 SMART SM00448 1002 1111 2.9E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 SMART SM00091 615 683 7.5E-4 T 11-10-2018 IPR000014 PAS domain AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 Gene3D G3DSA:3.40.50.2300 1000 1118 1.4E-10 T 11-10-2018 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 Gene3D G3DSA:1.20.1730.10 39 508 5.1E-9 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 SUPERFAMILY SSF47384 747 828 2.35E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 SMART SM00387 872 981 2.7E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 Gene3D G3DSA:3.30.565.10 835 985 2.1E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 Pfam PF12860 PAS fold 621 735 3.0E-39 T 11-10-2018 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 Gene3D G3DSA:1.10.287.130 732 826 9.1E-15 T 11-10-2018 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 SUPERFAMILY SSF52172 1000 1116 5.98E-15 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 873 979 4.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 SMART SM00388 761 828 8.0E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 Pfam PF00512 His Kinase A (phospho-acceptor) domain 761 827 1.3E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 SUPERFAMILY SSF55874 819 983 1.7E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 Gene3D G3DSA:3.30.450.20 603 731 1.3E-10 T 11-10-2018 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 Pfam PF00072 Response regulator receiver domain 1004 1109 2.9E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 PRINTS PR00344 Bacterial sensor protein C-terminal signature 941 959 3.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 PRINTS PR00344 Bacterial sensor protein C-terminal signature 908 922 3.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 PRINTS PR00344 Bacterial sensor protein C-terminal signature 926 936 3.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00511 d8b02c7bffa4dee24a3d47c8be592eae 1119 PRINTS PR00344 Bacterial sensor protein C-terminal signature 965 978 3.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02061 f61e6b554f94d655e6a23dcae1ae43ca 438 SUPERFAMILY SSF103473 2 424 1.09E-47 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_02061 f61e6b554f94d655e6a23dcae1ae43ca 438 Pfam PF07690 Major Facilitator Superfamily 4 394 5.5E-37 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 SUPERFAMILY SSF50447 205 303 3.34E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.4E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.4E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.4E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.4E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.4E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 Gene3D G3DSA:2.40.30.10 209 336 3.4E-52 T 11-10-2018 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 58.985 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.4E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 SUPERFAMILY SSF52540 3 216 6.79E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.6E-221 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 SUPERFAMILY SSF50465 304 396 9.35E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 6.1E-32 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 145 7.7E-16 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 Gene3D G3DSA:2.40.30.10 340 395 1.7E-27 T 11-10-2018 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 9.1E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01548 9892c99ab4e9412f8ac90cc342a17e18 396 Gene3D G3DSA:3.40.50.300 1 205 1.8E-71 T 11-10-2018 AMC99_02775 ec2717b4e0234f5beaaddc30d646848f 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 4 354 38.485 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMC99_02775 ec2717b4e0234f5beaaddc30d646848f 355 Pfam PF00472 RF-1 domain 207 317 1.1E-41 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_02775 ec2717b4e0234f5beaaddc30d646848f 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 6 354 6.8E-149 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMC99_02775 ec2717b4e0234f5beaaddc30d646848f 355 SUPERFAMILY SSF75620 12 350 9.55E-126 T 11-10-2018 AMC99_02775 ec2717b4e0234f5beaaddc30d646848f 355 Gene3D G3DSA:3.30.70.1660 109 338 1.9E-96 T 11-10-2018 AMC99_02775 ec2717b4e0234f5beaaddc30d646848f 355 SMART SM00937 60 175 3.1E-58 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMC99_02775 ec2717b4e0234f5beaaddc30d646848f 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_02775 ec2717b4e0234f5beaaddc30d646848f 355 Gene3D G3DSA:3.30.160.20 207 293 1.9E-96 T 11-10-2018 AMC99_02775 ec2717b4e0234f5beaaddc30d646848f 355 Pfam PF03462 PCRF domain 12 200 6.9E-66 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AMC99_02033 67d31d862faa832998ea451be8199cdc 267 SUPERFAMILY SSF54001 93 254 9.39E-28 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMC99_02033 67d31d862faa832998ea451be8199cdc 267 Gene3D G3DSA:3.10.620.30 78 245 2.7E-74 T 11-10-2018 AMC99_02033 67d31d862faa832998ea451be8199cdc 267 Gene3D G3DSA:2.60.40.2250 10 253 2.7E-74 T 11-10-2018 AMC99_02033 67d31d862faa832998ea451be8199cdc 267 SMART SM00460 158 225 1.4E-9 T 11-10-2018 IPR002931 Transglutaminase-like AMC99_02033 67d31d862faa832998ea451be8199cdc 267 Pfam PF01841 Transglutaminase-like superfamily 128 222 7.9E-20 T 11-10-2018 IPR002931 Transglutaminase-like AMC99_02693 ad05292984dac03ff0dab45fc27bf0c3 67 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.637 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_02693 ad05292984dac03ff0dab45fc27bf0c3 67 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_02693 ad05292984dac03ff0dab45fc27bf0c3 67 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.8E-9 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_02693 ad05292984dac03ff0dab45fc27bf0c3 67 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.8E-9 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_02693 ad05292984dac03ff0dab45fc27bf0c3 67 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.8E-9 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_02693 ad05292984dac03ff0dab45fc27bf0c3 67 Gene3D G3DSA:2.40.50.530 1 64 5.4E-23 T 11-10-2018 AMC99_02693 ad05292984dac03ff0dab45fc27bf0c3 67 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.5E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMC99_02693 ad05292984dac03ff0dab45fc27bf0c3 67 Pfam PF01632 Ribosomal protein L35 2 60 1.7E-20 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02693 ad05292984dac03ff0dab45fc27bf0c3 67 SUPERFAMILY SSF143034 2 64 7.06E-21 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01679 f34a8b64b197962cd75f943be451d472 182 Gene3D G3DSA:3.30.70.1280 1 87 2.3E-16 T 11-10-2018 AMC99_01679 f34a8b64b197962cd75f943be451d472 182 PIRSF PIRSF008502 1 182 1.6E-36 T 11-10-2018 IPR012545 Protein of unknown function DUF1697 AMC99_01679 f34a8b64b197962cd75f943be451d472 182 SUPERFAMILY SSF160379 1 179 6.67E-41 T 11-10-2018 AMC99_01679 f34a8b64b197962cd75f943be451d472 182 Pfam PF08002 Protein of unknown function (DUF1697) 1 140 4.2E-33 T 11-10-2018 IPR012545 Protein of unknown function DUF1697 AMC99_00427 5f965a2e3c7f411e7689345fbf569351 211 Hamap MF_00328 Guanylate kinase [gmk]. 9 193 36.105 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AMC99_00427 5f965a2e3c7f411e7689345fbf569351 211 ProSitePatterns PS00856 Guanylate kinase-like signature. 45 62 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMC99_00427 5f965a2e3c7f411e7689345fbf569351 211 SUPERFAMILY SSF52540 9 196 5.8E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00427 5f965a2e3c7f411e7689345fbf569351 211 Pfam PF00625 Guanylate kinase 14 191 3.6E-49 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMC99_00427 5f965a2e3c7f411e7689345fbf569351 211 Gene3D G3DSA:3.40.50.300 15 189 2.5E-65 T 11-10-2018 AMC99_00427 5f965a2e3c7f411e7689345fbf569351 211 SMART SM00072 10 193 3.0E-61 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMC99_00427 5f965a2e3c7f411e7689345fbf569351 211 Gene3D G3DSA:3.30.63.10 42 101 2.5E-65 T 11-10-2018 AMC99_00427 5f965a2e3c7f411e7689345fbf569351 211 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 12 190 5.3E-71 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AMC99_01447 09d7f5c04914217d3cf005d81601007f 386 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 204 382 2.0E-26 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 AMC99_01447 09d7f5c04914217d3cf005d81601007f 386 SUPERFAMILY SSF55961 198 384 1.73E-28 T 11-10-2018 AMC99_01447 09d7f5c04914217d3cf005d81601007f 386 Gene3D G3DSA:3.90.380.10 38 243 5.7E-47 T 11-10-2018 AMC99_01447 09d7f5c04914217d3cf005d81601007f 386 Gene3D G3DSA:2.102.10.10 58 178 5.7E-47 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMC99_01447 09d7f5c04914217d3cf005d81601007f 386 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 118 138 2.7E-7 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AMC99_01447 09d7f5c04914217d3cf005d81601007f 386 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 96 116 2.7E-7 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AMC99_01447 09d7f5c04914217d3cf005d81601007f 386 Pfam PF00355 Rieske [2Fe-2S] domain 63 145 8.0E-16 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_01447 09d7f5c04914217d3cf005d81601007f 386 SUPERFAMILY SSF50022 35 171 2.49E-40 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMC99_01336 a0183234b15dd7bb06cf0555686805f6 348 Gene3D G3DSA:3.40.50.970 29 205 5.6E-24 T 11-10-2018 AMC99_01336 a0183234b15dd7bb06cf0555686805f6 348 SUPERFAMILY SSF52518 15 319 2.53E-70 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01336 a0183234b15dd7bb06cf0555686805f6 348 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 55 201 1.5E-27 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMC99_01759 8a7a4f92bd49334c2cc7db5327554bcf 179 Pfam PF13527 Acetyltransferase (GNAT) domain 15 107 1.2E-9 T 11-10-2018 AMC99_01759 8a7a4f92bd49334c2cc7db5327554bcf 179 Gene3D G3DSA:3.40.630.30 13 165 6.6E-25 T 11-10-2018 AMC99_01759 8a7a4f92bd49334c2cc7db5327554bcf 179 SUPERFAMILY SSF55729 14 134 2.06E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02102 dcb5ea8cab5559d52601af4311ab9275 477 Pfam PF13641 Glycosyltransferase like family 2 67 335 9.1E-20 T 11-10-2018 AMC99_02102 dcb5ea8cab5559d52601af4311ab9275 477 Gene3D G3DSA:3.90.550.10 55 323 8.1E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_02102 dcb5ea8cab5559d52601af4311ab9275 477 SUPERFAMILY SSF53448 54 370 7.8E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00863 49cbc0b678fce8a770f01b187e81140e 757 Pfam PF04453 Organic solvent tolerance protein 318 683 5.0E-60 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 AMC99_00863 49cbc0b678fce8a770f01b187e81140e 757 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 16 756 14.706 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 AMC99_00863 49cbc0b678fce8a770f01b187e81140e 757 Gene3D G3DSA:2.60.450.10 30 131 1.6E-5 T 11-10-2018 AMC99_00863 49cbc0b678fce8a770f01b187e81140e 757 Pfam PF03968 OstA-like protein 64 208 2.7E-5 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 SUPERFAMILY SSF52540 97 379 1.55E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 510 51.915 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 Gene3D G3DSA:3.40.50.300 95 380 3.0E-131 T 11-10-2018 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 SUPERFAMILY SSF50615 11 95 1.23E-29 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 373 6.3E-74 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 PIRSF PIRSF039088 2 510 2.3E-282 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 Gene3D G3DSA:1.20.150.20 381 510 3.1E-55 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 93 7.8E-18 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 505 3.9E-51 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 Gene3D G3DSA:2.40.30.20 2 94 4.8E-39 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 SUPERFAMILY SSF47917 381 509 3.4E-50 T 11-10-2018 AMC99_01662 efdfd126e6d7b7b05097d21eddbc495e 510 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 510 1.5E-255 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_00959 51327f9c88eca7adc4be8e9ceaedfa34 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 247 4.0E-25 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 143 164 2.2E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 2.2E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.2E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 200 210 2.2E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 Pfam PF00579 tRNA synthetases class I (W and Y) 1 290 2.8E-79 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 Gene3D G3DSA:1.10.240.10 191 303 4.1E-127 T 11-10-2018 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 335 3.7E-96 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 SUPERFAMILY SSF52374 2 335 1.58E-92 T 11-10-2018 AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 Gene3D G3DSA:3.40.50.620 3 334 4.1E-127 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_00250 31c3ba767567eec966fe2c498f1d9b54 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 336 39.658 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AMC99_00687 c8a445a17577e566282a61fde0a4ae5f 185 Gene3D G3DSA:3.30.1360.40 31 105 5.7E-66 T 11-10-2018 AMC99_00687 c8a445a17577e566282a61fde0a4ae5f 185 SUPERFAMILY SSF55194 4 184 1.26E-66 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AMC99_00687 c8a445a17577e566282a61fde0a4ae5f 185 Pfam PF01765 Ribosome recycling factor 20 183 3.7E-59 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AMC99_00687 c8a445a17577e566282a61fde0a4ae5f 185 Gene3D G3DSA:1.10.132.20 12 182 5.7E-66 T 11-10-2018 AMC99_00687 c8a445a17577e566282a61fde0a4ae5f 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 184 5.8E-64 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AMC99_00687 c8a445a17577e566282a61fde0a4ae5f 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.307 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AMC99_02495 49b42253bfe03dfb716a7ae8f416b525 253 Pfam PF00005 ABC transporter 21 176 4.0E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_02495 49b42253bfe03dfb716a7ae8f416b525 253 SUPERFAMILY SSF52540 2 239 3.88E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02495 49b42253bfe03dfb716a7ae8f416b525 253 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 248 2.8E-102 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 AMC99_02495 49b42253bfe03dfb716a7ae8f416b525 253 Gene3D G3DSA:3.40.50.300 5 252 4.9E-56 T 11-10-2018 AMC99_01534 0a7e1430f0282a06f5c58c45977ed539 192 SUPERFAMILY SSF55282 7 181 1.6E-78 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01534 0a7e1430f0282a06f5c58c45977ed539 192 Pfam PF00673 ribosomal L5P family C-terminus 88 181 8.7E-42 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01534 0a7e1430f0282a06f5c58c45977ed539 192 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 5 183 43.697 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01534 0a7e1430f0282a06f5c58c45977ed539 192 Pfam PF00281 Ribosomal protein L5 28 84 1.6E-27 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01534 0a7e1430f0282a06f5c58c45977ed539 192 ProSitePatterns PS00358 Ribosomal protein L5 signature. 61 77 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01534 0a7e1430f0282a06f5c58c45977ed539 192 PIRSF PIRSF002161 2 190 2.7E-69 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01534 0a7e1430f0282a06f5c58c45977ed539 192 Gene3D G3DSA:3.30.1440.10 3 182 1.8E-81 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_00864 c80722862b5fee30553e89af37923030 486 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 331 338 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_00864 c80722862b5fee30553e89af37923030 486 SUPERFAMILY SSF52949 1 168 1.18E-13 T 11-10-2018 AMC99_00864 c80722862b5fee30553e89af37923030 486 Gene3D G3DSA:3.40.630.10 151 486 9.3E-130 T 11-10-2018 AMC99_00864 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 305 326 3.2E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_00864 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 246 263 3.2E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_00864 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 268 289 3.2E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_00864 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 327 347 3.2E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_00864 c80722862b5fee30553e89af37923030 486 PRINTS PR00481 Cytosol aminopeptidase signature 356 371 3.2E-50 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AMC99_00864 c80722862b5fee30553e89af37923030 486 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 485 33.559 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AMC99_00864 c80722862b5fee30553e89af37923030 486 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 170 476 1.4E-119 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_00864 c80722862b5fee30553e89af37923030 486 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 29 133 2.6E-9 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AMC99_00864 c80722862b5fee30553e89af37923030 486 Gene3D G3DSA:3.40.220.10 1 149 5.8E-12 T 11-10-2018 AMC99_00864 c80722862b5fee30553e89af37923030 486 SUPERFAMILY SSF53187 165 482 5.34E-116 T 11-10-2018 AMC99_02254 09ffbb1f1bd3eed012daf18a5a940deb 251 SMART SM00382 34 222 1.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02254 09ffbb1f1bd3eed012daf18a5a940deb 251 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_02254 09ffbb1f1bd3eed012daf18a5a940deb 251 Pfam PF00005 ABC transporter 25 172 6.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_02254 09ffbb1f1bd3eed012daf18a5a940deb 251 SUPERFAMILY SSF52540 8 228 1.21E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02254 09ffbb1f1bd3eed012daf18a5a940deb 251 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 8 221 3.5E-86 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 AMC99_02254 09ffbb1f1bd3eed012daf18a5a940deb 251 Gene3D G3DSA:3.40.50.300 5 232 7.5E-60 T 11-10-2018 AMC99_00457 7136c3a1467198f49ff6bb78a1921860 610 SUPERFAMILY SSF58104 261 589 4.45E-53 T 11-10-2018 AMC99_00457 7136c3a1467198f49ff6bb78a1921860 610 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 396 512 1.4E-27 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_00457 7136c3a1467198f49ff6bb78a1921860 610 Gene3D G3DSA:1.10.287.950 309 591 1.3E-46 T 11-10-2018 AMC99_00457 7136c3a1467198f49ff6bb78a1921860 610 SMART SM00283 336 590 2.7E-28 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_00457 7136c3a1467198f49ff6bb78a1921860 610 Gene3D G3DSA:1.20.1480.50 196 290 1.4E-13 T 11-10-2018 AMC99_00457 7136c3a1467198f49ff6bb78a1921860 610 SMART SM00304 232 285 0.0051 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMC99_01628 ceb5b1267640898eacf99cb788df24d4 229 Pfam PF13462 Thioredoxin 38 225 3.8E-24 T 11-10-2018 IPR012336 Thioredoxin-like fold AMC99_01628 ceb5b1267640898eacf99cb788df24d4 229 Gene3D G3DSA:3.30.750.110 96 197 4.1E-62 T 11-10-2018 AMC99_01628 ceb5b1267640898eacf99cb788df24d4 229 SUPERFAMILY SSF52833 31 225 1.29E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01628 ceb5b1267640898eacf99cb788df24d4 229 Gene3D G3DSA:3.40.30.10 41 223 4.1E-62 T 11-10-2018 AMC99_02463 e14237c5648f4480887a6cb3132de87b 244 Pfam PF04116 Fatty acid hydroxylase superfamily 96 230 1.3E-29 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AMC99_00501 5c9f26a796e257d642cf2c89bc140847 478 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 93 477 4.9E-137 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 AMC99_00501 5c9f26a796e257d642cf2c89bc140847 478 Pfam PF08666 SAF domain 3 66 1.9E-8 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMC99_00501 5c9f26a796e257d642cf2c89bc140847 478 Gene3D G3DSA:3.90.1210.30 1 69 1.8E-21 T 11-10-2018 AMC99_02698 e00ee6fcac13868cc6c1b3473d321964 366 SUPERFAMILY SSF55681 92 349 4.97E-74 T 11-10-2018 AMC99_02698 e00ee6fcac13868cc6c1b3473d321964 366 Gene3D G3DSA:3.30.930.10 8 350 6.0E-107 T 11-10-2018 AMC99_02698 e00ee6fcac13868cc6c1b3473d321964 366 SUPERFAMILY SSF46589 12 98 1.46E-16 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AMC99_02698 e00ee6fcac13868cc6c1b3473d321964 366 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 348 44.713 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AMC99_02698 e00ee6fcac13868cc6c1b3473d321964 366 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 87 1.1E-17 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMC99_02698 e00ee6fcac13868cc6c1b3473d321964 366 Pfam PF01409 tRNA synthetases class II core domain (F) 92 347 2.7E-97 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AMC99_02698 e00ee6fcac13868cc6c1b3473d321964 366 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 347 1.2E-95 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 SUPERFAMILY SSF52096 41 375 7.95E-76 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 Gene3D G3DSA:3.30.750.44 44 339 3.9E-87 T 11-10-2018 AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 Pfam PF03572 Peptidase family S41 194 363 1.4E-51 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 Pfam PF13180 PDZ domain 97 176 7.5E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 Gene3D G3DSA:2.30.42.10 96 183 3.9E-87 T 11-10-2018 AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 SMART SM00228 96 167 1.8E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 49 371 6.5E-100 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 Gene3D G3DSA:3.90.226.10 184 361 3.9E-87 T 11-10-2018 AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 SUPERFAMILY SSF50156 88 178 4.79E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMC99_02592 6f9f1076fd7d2e176fa1d40ced0c6030 445 SMART SM00245 169 364 1.9E-68 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 Gene3D G3DSA:2.40.110.10 122 234 9.4E-123 T 11-10-2018 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 222 2.4E-27 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 Gene3D G3DSA:1.20.140.10 235 380 9.4E-123 T 11-10-2018 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 SUPERFAMILY SSF56645 9 248 1.19E-71 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 Gene3D G3DSA:1.10.540.10 10 121 9.4E-123 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 SUPERFAMILY SSF47203 233 387 1.21E-50 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 384 4.7E-46 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 342 361 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 120 3.0E-23 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 PIRSF PIRSF016578 6 385 2.9E-26 T 11-10-2018 AMC99_02358 82d4d0d7dd67129e36de9278d3aef450 392 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_01602 0bcfe0ba9eaeba2118a6e89cb4d220af 993 Pfam PF00675 Insulinase (Peptidase family M16) 80 193 1.8E-16 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AMC99_01602 0bcfe0ba9eaeba2118a6e89cb4d220af 993 Gene3D G3DSA:3.30.830.10 60 282 1.4E-54 T 11-10-2018 AMC99_01602 0bcfe0ba9eaeba2118a6e89cb4d220af 993 SUPERFAMILY SSF63411 786 955 2.79E-12 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_01602 0bcfe0ba9eaeba2118a6e89cb4d220af 993 SUPERFAMILY SSF63411 549 763 7.86E-25 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_01602 0bcfe0ba9eaeba2118a6e89cb4d220af 993 Pfam PF05193 Peptidase M16 inactive domain 233 315 9.2E-13 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMC99_01602 0bcfe0ba9eaeba2118a6e89cb4d220af 993 Pfam PF05193 Peptidase M16 inactive domain 734 838 2.0E-5 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMC99_01602 0bcfe0ba9eaeba2118a6e89cb4d220af 993 Gene3D G3DSA:3.30.830.10 554 762 1.9E-17 T 11-10-2018 AMC99_01602 0bcfe0ba9eaeba2118a6e89cb4d220af 993 Gene3D G3DSA:3.30.830.10 774 966 1.0E-13 T 11-10-2018 AMC99_01602 0bcfe0ba9eaeba2118a6e89cb4d220af 993 SUPERFAMILY SSF63411 57 269 3.67E-37 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_00469 1a9329cd12d6db1d3e0c258757bed681 196 SUPERFAMILY SSF46689 5 72 2.74E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_00469 1a9329cd12d6db1d3e0c258757bed681 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 53 9.6E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00469 1a9329cd12d6db1d3e0c258757bed681 196 Gene3D G3DSA:1.10.357.10 2 195 1.2E-19 T 11-10-2018 AMC99_00483 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 131 2.8E-22 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00483 aa7a5e4ab69c3c685ee33b7dd29ce791 403 SUPERFAMILY SSF47203 240 398 6.28E-15 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00483 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Gene3D G3DSA:1.20.140.10 244 401 6.2E-28 T 11-10-2018 AMC99_00483 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Gene3D G3DSA:1.10.540.10 7 130 2.6E-30 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00483 aa7a5e4ab69c3c685ee33b7dd29ce791 403 SUPERFAMILY SSF56645 10 253 4.32E-76 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00483 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Gene3D G3DSA:2.40.110.10 135 243 3.6E-40 T 11-10-2018 AMC99_00483 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 228 1.6E-22 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00483 aa7a5e4ab69c3c685ee33b7dd29ce791 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 397 4.7E-17 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_02092 a327da3d90d099e259b189620d4ab8f3 1069 Gene3D G3DSA:2.80.10.50 980 1069 4.7E-16 T 11-10-2018 AMC99_02092 a327da3d90d099e259b189620d4ab8f3 1069 Gene3D G3DSA:2.80.10.50 854 979 8.1E-21 T 11-10-2018 AMC99_00767 5a27f24d4a3a9b6be67ad0402b57dda1 310 SUPERFAMILY SSF56281 36 276 8.26E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_00767 5a27f24d4a3a9b6be67ad0402b57dda1 310 Gene3D G3DSA:3.60.15.10 23 310 7.0E-110 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_00767 5a27f24d4a3a9b6be67ad0402b57dda1 310 Pfam PF00753 Metallo-beta-lactamase superfamily 37 227 2.2E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_00767 5a27f24d4a3a9b6be67ad0402b57dda1 310 SMART SM00849 37 227 1.7E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_00691 0092e0ffef897a1f6c5434c373ca3484 369 Gene3D G3DSA:2.30.42.10 139 231 1.4E-14 T 11-10-2018 AMC99_00691 0092e0ffef897a1f6c5434c373ca3484 369 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 136 364 1.1E-49 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 AMC99_00691 0092e0ffef897a1f6c5434c373ca3484 369 Pfam PF13180 PDZ domain 139 204 2.5E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMC99_00691 0092e0ffef897a1f6c5434c373ca3484 369 SUPERFAMILY SSF50156 105 204 3.42E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMC99_00691 0092e0ffef897a1f6c5434c373ca3484 369 Pfam PF02163 Peptidase family M50 6 352 6.9E-74 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AMC99_02021 7455fead4571b73b6252acf53a0284aa 248 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 202 224 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMC99_02021 7455fead4571b73b6252acf53a0284aa 248 Gene3D G3DSA:1.10.3730.10 144 248 3.3E-30 T 11-10-2018 AMC99_02021 7455fead4571b73b6252acf53a0284aa 248 PIRSF PIRSF000193 13 248 2.7E-46 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMC99_02021 7455fead4571b73b6252acf53a0284aa 248 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 142 247 3.8E-25 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMC99_02021 7455fead4571b73b6252acf53a0284aa 248 SUPERFAMILY SSF48179 141 247 3.06E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_02021 7455fead4571b73b6252acf53a0284aa 248 SUPERFAMILY SSF51735 1 138 1.28E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02021 7455fead4571b73b6252acf53a0284aa 248 Gene3D G3DSA:3.40.50.720 1 143 1.2E-26 T 11-10-2018 AMC99_02021 7455fead4571b73b6252acf53a0284aa 248 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 247 19.445 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 140 1.2E-9 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 SUPERFAMILY SSF47203 261 422 1.27E-41 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 263 414 1.3E-40 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 Gene3D G3DSA:1.10.540.10 1 149 1.4E-20 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 Gene3D G3DSA:1.20.140.10 266 417 1.1E-38 T 11-10-2018 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 Gene3D G3DSA:2.40.110.10 150 265 1.8E-31 T 11-10-2018 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 PIRSF PIRSF016578 163 414 1.8E-12 T 11-10-2018 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 PIRSF PIRSF016578 59 102 20.0 T 11-10-2018 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 SUPERFAMILY SSF56645 26 272 5.37E-57 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00504 397229487e80bae85ee6b93f69ad06ff 428 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 151 233 1.0E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00677 572137ce75f4144fc1c8b38462fbd2d6 264 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 33 103 8.7E-11 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMC99_00677 572137ce75f4144fc1c8b38462fbd2d6 264 Gene3D G3DSA:3.40.1280.10 102 263 4.2E-48 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_00677 572137ce75f4144fc1c8b38462fbd2d6 264 SUPERFAMILY SSF75217 92 260 7.19E-41 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMC99_00677 572137ce75f4144fc1c8b38462fbd2d6 264 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 32 261 1.5E-50 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AMC99_00677 572137ce75f4144fc1c8b38462fbd2d6 264 SMART SM00967 32 104 1.2E-12 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMC99_00677 572137ce75f4144fc1c8b38462fbd2d6 264 Pfam PF00588 SpoU rRNA Methylase family 118 257 1.0E-35 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMC99_00677 572137ce75f4144fc1c8b38462fbd2d6 264 SUPERFAMILY SSF55315 27 101 8.95E-11 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AMC99_00187 cea296eaca8824833d420918e0603ed0 360 Gene3D G3DSA:3.40.50.10540 7 321 1.5E-108 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_00187 cea296eaca8824833d420918e0603ed0 360 Gene3D G3DSA:3.30.1540.10 215 303 1.5E-108 T 11-10-2018 AMC99_00187 cea296eaca8824833d420918e0603ed0 360 SUPERFAMILY SSF89796 6 345 3.79E-105 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_00187 cea296eaca8824833d420918e0603ed0 360 Pfam PF02515 CoA-transferase family III 8 345 2.5E-78 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMC99_00340 0bd9ad047ce7eeb40e0a6b4357770402 535 Pfam PF00266 Aminotransferase class-V 187 305 7.1E-10 T 11-10-2018 IPR000192 Aminotransferase class V domain AMC99_00340 0bd9ad047ce7eeb40e0a6b4357770402 535 Gene3D G3DSA:3.40.640.10 112 345 2.4E-52 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_00340 0bd9ad047ce7eeb40e0a6b4357770402 535 Gene3D G3DSA:3.90.1150.10 372 504 2.0E-36 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_00340 0bd9ad047ce7eeb40e0a6b4357770402 535 SUPERFAMILY SSF53383 65 517 4.28E-94 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01938 94649d6bbde002c1ed0309eb42252684 1038 Pfam PF07715 TonB-dependent Receptor Plug Domain 144 237 4.5E-5 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_01938 94649d6bbde002c1ed0309eb42252684 1038 SUPERFAMILY SSF49464 38 121 2.75E-14 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AMC99_01938 94649d6bbde002c1ed0309eb42252684 1038 Pfam PF13620 Carboxypeptidase regulatory-like domain 38 117 2.8E-21 T 11-10-2018 AMC99_01938 94649d6bbde002c1ed0309eb42252684 1038 Pfam PF00593 TonB dependent receptor 369 1036 2.5E-16 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_01938 94649d6bbde002c1ed0309eb42252684 1038 SUPERFAMILY SSF56935 124 1038 2.56E-61 T 11-10-2018 AMC99_01938 94649d6bbde002c1ed0309eb42252684 1038 Gene3D G3DSA:2.60.40.1120 37 119 7.0E-14 T 11-10-2018 AMC99_02429 c173374345ea95625c6c589a04ea81f3 534 Gene3D G3DSA:3.50.50.60 9 489 2.5E-130 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02429 c173374345ea95625c6c589a04ea81f3 534 SUPERFAMILY SSF51971 14 475 6.12E-44 T 11-10-2018 AMC99_02429 c173374345ea95625c6c589a04ea81f3 534 Pfam PF13450 NAD(P)-binding Rossmann-like domain 18 83 3.9E-14 T 11-10-2018 AMC99_02221 18ab56c162d1b3716f09804fbd4f7cc0 176 Pfam PF13426 PAS domain 23 110 9.3E-12 T 11-10-2018 IPR000014 PAS domain AMC99_02221 18ab56c162d1b3716f09804fbd4f7cc0 176 SUPERFAMILY SSF55785 4 114 2.97E-12 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_02221 18ab56c162d1b3716f09804fbd4f7cc0 176 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 4 111 2.7E-7 T 11-10-2018 IPR000014 PAS domain AMC99_02221 18ab56c162d1b3716f09804fbd4f7cc0 176 Gene3D G3DSA:3.30.450.20 2 142 4.3E-24 T 11-10-2018 AMC99_00522 6f5c61a7bf207dab323632673c2e2bd6 270 SUPERFAMILY SSF53474 51 233 4.16E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00522 6f5c61a7bf207dab323632673c2e2bd6 270 Pfam PF12697 Alpha/beta hydrolase family 72 242 2.4E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_00522 6f5c61a7bf207dab323632673c2e2bd6 270 Gene3D G3DSA:3.40.50.1820 56 250 3.4E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02138 924e172b164036e92e3436102368646e 207 SUPERFAMILY SSF52833 45 206 8.66E-45 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02138 924e172b164036e92e3436102368646e 207 Pfam PF02630 SCO1/SenC 43 186 7.4E-40 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_02138 924e172b164036e92e3436102368646e 207 Gene3D G3DSA:3.40.30.10 35 207 8.3E-50 T 11-10-2018 AMC99_01504 bc0adac28d017f435fb0cd8160c936e7 624 SMART SM00052 362 604 1.3E-100 T 11-10-2018 IPR001633 EAL domain AMC99_01504 bc0adac28d017f435fb0cd8160c936e7 624 Gene3D G3DSA:3.30.70.270 187 365 2.6E-52 T 11-10-2018 AMC99_01504 bc0adac28d017f435fb0cd8160c936e7 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 193 347 8.0E-39 T 11-10-2018 IPR000160 GGDEF domain AMC99_01504 bc0adac28d017f435fb0cd8160c936e7 624 Gene3D G3DSA:3.20.20.450 366 621 1.5E-88 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_01504 bc0adac28d017f435fb0cd8160c936e7 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 190 350 2.7E-34 T 11-10-2018 IPR000160 GGDEF domain AMC99_01504 bc0adac28d017f435fb0cd8160c936e7 624 SUPERFAMILY SSF141868 367 603 2.35E-82 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_01504 bc0adac28d017f435fb0cd8160c936e7 624 Pfam PF00563 EAL domain 368 598 8.2E-68 T 11-10-2018 IPR001633 EAL domain AMC99_01504 bc0adac28d017f435fb0cd8160c936e7 624 SMART SM00267 182 352 1.3E-49 T 11-10-2018 IPR000160 GGDEF domain AMC99_01504 bc0adac28d017f435fb0cd8160c936e7 624 SUPERFAMILY SSF55073 199 353 3.92E-41 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_00281 bcb6273e4674834252552f3819c963f8 341 SUPERFAMILY SSF144083 279 339 6.28E-15 T 11-10-2018 AMC99_00281 bcb6273e4674834252552f3819c963f8 341 Pfam PF01544 CorA-like Mg2+ transporter protein 52 337 1.1E-47 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMC99_00281 bcb6273e4674834252552f3819c963f8 341 Gene3D G3DSA:3.30.460.20 12 150 2.3E-34 T 11-10-2018 AMC99_00281 bcb6273e4674834252552f3819c963f8 341 Gene3D G3DSA:1.20.58.340 284 341 1.2E-14 T 11-10-2018 AMC99_00281 bcb6273e4674834252552f3819c963f8 341 Gene3D G3DSA:1.20.58.340 153 274 2.5E-26 T 11-10-2018 AMC99_00281 bcb6273e4674834252552f3819c963f8 341 SUPERFAMILY SSF143865 19 267 5.23E-44 T 11-10-2018 AMC99_00429 cdd5515b0f7da4c52090d2c1464d247c 188 SUPERFAMILY SSF101738 29 144 4.45E-41 T 11-10-2018 IPR036760 SspB-like superfamily AMC99_00429 cdd5515b0f7da4c52090d2c1464d247c 188 Pfam PF04386 Stringent starvation protein B 36 167 3.5E-47 T 11-10-2018 IPR007481 Stringent starvation protein B AMC99_00429 cdd5515b0f7da4c52090d2c1464d247c 188 Gene3D G3DSA:2.30.30.220 20 146 6.9E-49 T 11-10-2018 IPR036760 SspB-like superfamily AMC99_00650 bb5890af347f5b29db7f0e19931a76f0 285 PIRSF PIRSF015582 1 285 4.6E-73 T 11-10-2018 IPR011206 Citrate lyase beta subunit-like AMC99_00650 bb5890af347f5b29db7f0e19931a76f0 285 SUPERFAMILY SSF51621 1 237 1.33E-54 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMC99_00650 bb5890af347f5b29db7f0e19931a76f0 285 Gene3D G3DSA:3.20.20.60 1 285 4.9E-85 T 11-10-2018 AMC99_00650 bb5890af347f5b29db7f0e19931a76f0 285 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 2 225 6.6E-32 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 AMC99_02531 af2f3f76347f923a32c78655cd94a57d 261 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 259 1.4E-67 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AMC99_02531 af2f3f76347f923a32c78655cd94a57d 261 Gene3D G3DSA:3.60.10.10 1 259 2.0E-71 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMC99_02531 af2f3f76347f923a32c78655cd94a57d 261 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 252 6.9E-19 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_02531 af2f3f76347f923a32c78655cd94a57d 261 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 259 4.8E-71 T 11-10-2018 AMC99_02531 af2f3f76347f923a32c78655cd94a57d 261 SUPERFAMILY SSF56219 1 259 9.81E-77 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMC99_02769 b168d87938dadabc2e3302d35a5e59c6 276 SMART SM00382 64 251 2.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02769 b168d87938dadabc2e3302d35a5e59c6 276 Gene3D G3DSA:3.40.50.300 38 276 2.8E-66 T 11-10-2018 AMC99_02769 b168d87938dadabc2e3302d35a5e59c6 276 Pfam PF00005 ABC transporter 55 201 1.2E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_02769 b168d87938dadabc2e3302d35a5e59c6 276 SUPERFAMILY SSF52540 40 271 6.91E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02769 b168d87938dadabc2e3302d35a5e59c6 276 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 40 276 2.1E-108 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 PIRSF PIRSF000447 1 419 1.2E-178 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 Gene3D G3DSA:3.40.47.10 263 407 1.1E-48 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 Gene3D G3DSA:3.40.47.10 1 261 7.3E-89 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 SMART SM00825 Beta-ketoacyl synthase 4 418 7.6E-17 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 SUPERFAMILY SSF53901 221 418 2.74E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 416 3.2E-187 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 SUPERFAMILY SSF53901 1 258 5.59E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 374 2.3E-36 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AMC99_00726 3c348cf0b5bc60f703e5efa959c7e92e 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 253 1.5E-60 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AMC99_00998 408812df1ac08db5c767390a8955750d 599 SUPERFAMILY SSF116726 310 392 4.05E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMC99_00998 408812df1ac08db5c767390a8955750d 599 Pfam PF03600 Citrate transporter 20 546 6.3E-31 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 AMC99_00998 408812df1ac08db5c767390a8955750d 599 Pfam PF02080 TrkA-C domain 315 388 9.0E-14 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMC99_00998 408812df1ac08db5c767390a8955750d 599 Gene3D G3DSA:3.30.70.1450 314 389 3.9E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 AMC99_01877 ef91c29fd7d258d330ce05c5eb47dcf6 337 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMC99_01877 ef91c29fd7d258d330ce05c5eb47dcf6 337 Gene3D G3DSA:3.40.50.1100 41 162 2.2E-109 T 11-10-2018 AMC99_01877 ef91c29fd7d258d330ce05c5eb47dcf6 337 Gene3D G3DSA:3.40.50.1100 11 314 2.2E-109 T 11-10-2018 AMC99_01877 ef91c29fd7d258d330ce05c5eb47dcf6 337 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 308 2.9E-66 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMC99_01877 ef91c29fd7d258d330ce05c5eb47dcf6 337 SUPERFAMILY SSF53686 6 330 4.06E-96 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 383 399 1.4E-75 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 515 543 1.4E-75 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 238 265 1.4E-75 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 351 376 1.4E-75 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 452 477 1.4E-75 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 411 431 1.4E-75 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 487 514 1.4E-75 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 273 294 1.4E-75 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 Gene3D G3DSA:1.10.1370.30 359 615 4.9E-7 T 11-10-2018 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 SUPERFAMILY SSF55486 46 619 3.18E-200 T 11-10-2018 AMC99_01399 2698589b758dbf48ee1d22a086e7995e 619 Pfam PF01401 Angiotensin-converting enzyme 44 619 1.1E-202 T 11-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 AMC99_01457 91c7c20d006b53e7fd08705b6df337bf 315 Gene3D G3DSA:3.40.630.40 18 303 2.2E-86 T 11-10-2018 AMC99_01457 91c7c20d006b53e7fd08705b6df337bf 315 Pfam PF05013 N-formylglutamate amidohydrolase 38 272 9.7E-60 T 11-10-2018 IPR007709 N-formylglutamate amidohydrolase AMC99_01457 91c7c20d006b53e7fd08705b6df337bf 315 SUPERFAMILY SSF53187 27 301 3.77E-67 T 11-10-2018 AMC99_01120 b166007adba95830acea35754e1db669 151 SMART SM00422 33 100 2.5E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_01120 b166007adba95830acea35754e1db669 151 Gene3D G3DSA:1.10.1660.10 22 150 4.6E-25 T 11-10-2018 AMC99_01120 b166007adba95830acea35754e1db669 151 SUPERFAMILY SSF46955 33 148 6.23E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMC99_01120 b166007adba95830acea35754e1db669 151 Pfam PF09278 MerR, DNA binding 74 140 6.2E-15 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding AMC99_01120 b166007adba95830acea35754e1db669 151 Pfam PF00376 MerR family regulatory protein 34 62 4.8E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_02651 c1c791d600ec38f99f7ead36cd19714e 143 Gene3D G3DSA:3.40.50.7700 1 142 1.9E-61 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMC99_02651 c1c791d600ec38f99f7ead36cd19714e 143 Pfam PF00731 AIR carboxylase 1 133 1.1E-55 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMC99_02651 c1c791d600ec38f99f7ead36cd19714e 143 SUPERFAMILY SSF52255 1 139 3.4E-57 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AMC99_02651 c1c791d600ec38f99f7ead36cd19714e 143 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 139 4.0E-57 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMC99_02651 c1c791d600ec38f99f7ead36cd19714e 143 SMART SM01001 1 137 2.0E-80 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AMC99_02651 c1c791d600ec38f99f7ead36cd19714e 143 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 141 26.044 T 11-10-2018 IPR033747 Class I PurE AMC99_02651 c1c791d600ec38f99f7ead36cd19714e 143 PIRSF PIRSF001338 1 142 6.3E-59 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AMC99_02734 38dff28352e9268b101f013dad049b8a 416 Gene3D G3DSA:3.90.1150.10 58 405 1.2E-130 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_02734 38dff28352e9268b101f013dad049b8a 416 Gene3D G3DSA:3.40.640.10 78 312 1.2E-130 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_02734 38dff28352e9268b101f013dad049b8a 416 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 259 268 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AMC99_02734 38dff28352e9268b101f013dad049b8a 416 Pfam PF00155 Aminotransferase class I and II 63 403 5.2E-55 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_02734 38dff28352e9268b101f013dad049b8a 416 SUPERFAMILY SSF53383 36 414 1.46E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01878 ef85379622b3d6fbe345568a5de061a9 105 Gene3D G3DSA:3.10.20.30 3 105 4.9E-33 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_01878 ef85379622b3d6fbe345568a5de061a9 105 PRINTS PR00355 Adrenodoxin signature 82 90 4.2E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMC99_01878 ef85379622b3d6fbe345568a5de061a9 105 PRINTS PR00355 Adrenodoxin signature 40 50 4.2E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMC99_01878 ef85379622b3d6fbe345568a5de061a9 105 PRINTS PR00355 Adrenodoxin signature 59 73 4.2E-9 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AMC99_01878 ef85379622b3d6fbe345568a5de061a9 105 SUPERFAMILY SSF54292 3 101 1.19E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMC99_01878 ef85379622b3d6fbe345568a5de061a9 105 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 89 2.5E-11 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_02262 f4250c45464e6bc410d3628a9faabdf9 290 Gene3D G3DSA:3.40.50.1580 2 283 2.7E-94 T 11-10-2018 AMC99_02262 f4250c45464e6bc410d3628a9faabdf9 290 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 53 93 - T 11-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 AMC99_02262 f4250c45464e6bc410d3628a9faabdf9 290 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 5 269 39.19 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 AMC99_02262 f4250c45464e6bc410d3628a9faabdf9 290 SUPERFAMILY SSF53167 5 268 3.76E-86 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMC99_02262 f4250c45464e6bc410d3628a9faabdf9 290 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 7 245 4.1E-88 T 11-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 AMC99_02262 f4250c45464e6bc410d3628a9faabdf9 290 Pfam PF01048 Phosphorylase superfamily 6 244 1.9E-40 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMC99_01245 8ab0d2145f9bad15c93704d06dc8a192 236 SUPERFAMILY SSF55681 3 183 4.97E-36 T 11-10-2018 AMC99_01245 8ab0d2145f9bad15c93704d06dc8a192 236 Gene3D G3DSA:2.30.30.100 190 236 5.3E-7 T 11-10-2018 AMC99_01245 8ab0d2145f9bad15c93704d06dc8a192 236 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 3 235 3.2E-33 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_01245 8ab0d2145f9bad15c93704d06dc8a192 236 Gene3D G3DSA:3.30.930.10 1 185 1.7E-44 T 11-10-2018 AMC99_01245 8ab0d2145f9bad15c93704d06dc8a192 236 Pfam PF02237 Biotin protein ligase C terminal domain 200 233 8.9E-5 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_01245 8ab0d2145f9bad15c93704d06dc8a192 236 SUPERFAMILY SSF50037 192 235 3.43E-5 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AMC99_01245 8ab0d2145f9bad15c93704d06dc8a192 236 Pfam PF03099 Biotin/lipoate A/B protein ligase family 28 128 2.6E-6 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMC99_00495 4fb71517a082305adca44cf416107e95 894 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 29 893 4.5E-179 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor AMC99_00495 4fb71517a082305adca44cf416107e95 894 Gene3D G3DSA:2.40.170.20 263 893 8.2E-46 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_00495 4fb71517a082305adca44cf416107e95 894 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 156 9.3E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_00495 4fb71517a082305adca44cf416107e95 894 SUPERFAMILY SSF56935 25 892 3.66E-85 T 11-10-2018 AMC99_00495 4fb71517a082305adca44cf416107e95 894 Pfam PF00593 TonB dependent receptor 393 892 6.0E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_00495 4fb71517a082305adca44cf416107e95 894 Gene3D G3DSA:2.170.130.10 23 161 2.5E-16 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_01460 cf16b7050c30a9413e8afbe2619033a8 407 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 395 4.7E-72 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMC99_01460 cf16b7050c30a9413e8afbe2619033a8 407 PIRSF PIRSF000108 1 406 1.6E-221 T 11-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMC99_01460 cf16b7050c30a9413e8afbe2619033a8 407 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMC99_01460 cf16b7050c30a9413e8afbe2619033a8 407 SUPERFAMILY SSF53659 1 404 3.84E-152 T 11-10-2018 AMC99_01460 cf16b7050c30a9413e8afbe2619033a8 407 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 2 404 2.3E-214 T 11-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AMC99_01460 cf16b7050c30a9413e8afbe2619033a8 407 Gene3D G3DSA:3.40.718.10 1 405 1.7E-212 T 11-10-2018 AMC99_01460 cf16b7050c30a9413e8afbe2619033a8 407 SMART SM01329 9 395 6.8E-126 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 SUPERFAMILY SSF55961 159 375 7.85E-40 T 11-10-2018 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 141 167 3.6E-20 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 3.6E-20 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 3.6E-20 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 3.6E-20 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 3.6E-20 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 Gene3D G3DSA:2.102.10.10 41 162 1.9E-70 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 Gene3D G3DSA:3.90.380.10 18 368 1.9E-70 T 11-10-2018 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 Pfam PF00355 Rieske [2Fe-2S] domain 43 129 4.8E-20 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 192 374 3.4E-37 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 AMC99_02219 f43447257d8abcb3cc962af795bfbc32 390 SUPERFAMILY SSF50022 16 157 9.3E-49 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMC99_01436 8b808f4c2bb958b5d6b34137f6d6b181 236 Gene3D G3DSA:1.10.150.20 56 98 3.6E-9 T 11-10-2018 AMC99_01436 8b808f4c2bb958b5d6b34137f6d6b181 236 Gene3D G3DSA:3.40.140.10 115 236 2.9E-41 T 11-10-2018 AMC99_01436 8b808f4c2bb958b5d6b34137f6d6b181 236 Pfam PF04002 RadC-like JAB domain 116 234 8.5E-43 T 11-10-2018 IPR025657 RadC-like JAB domain AMC99_01436 8b808f4c2bb958b5d6b34137f6d6b181 236 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 236 1.4E-71 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AMC99_01436 8b808f4c2bb958b5d6b34137f6d6b181 236 SUPERFAMILY SSF102712 164 202 2.62E-5 T 11-10-2018 AMC99_01436 8b808f4c2bb958b5d6b34137f6d6b181 236 SUPERFAMILY SSF47781 27 96 4.45E-10 T 11-10-2018 IPR010994 RuvA domain 2-like AMC99_01436 8b808f4c2bb958b5d6b34137f6d6b181 236 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 185 190 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AMC99_02412 b7df78d9e3b2ca49e76ac3c9b14aa211 63 SUPERFAMILY SSF47413 2 61 9.85E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_02412 b7df78d9e3b2ca49e76ac3c9b14aa211 63 SMART SM00530 4 59 1.3E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_02412 b7df78d9e3b2ca49e76ac3c9b14aa211 63 Pfam PF01381 Helix-turn-helix 5 58 2.6E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_02412 b7df78d9e3b2ca49e76ac3c9b14aa211 63 Gene3D G3DSA:1.10.260.40 1 63 6.8E-28 T 11-10-2018 AMC99_01429 787957bcf2e1a8902147e19f87b160ac 75 Pfam PF00137 ATP synthase subunit C 10 71 2.3E-9 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMC99_01429 787957bcf2e1a8902147e19f87b160ac 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 4 72 13.034 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01429 787957bcf2e1a8902147e19f87b160ac 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 1.3E-16 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01429 787957bcf2e1a8902147e19f87b160ac 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 1.3E-16 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01429 787957bcf2e1a8902147e19f87b160ac 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 1.3E-16 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01429 787957bcf2e1a8902147e19f87b160ac 75 SUPERFAMILY SSF81333 5 73 1.96E-14 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AMC99_01429 787957bcf2e1a8902147e19f87b160ac 75 Gene3D G3DSA:1.20.20.10 2 75 6.3E-21 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_00032 2639986748caaa76a62d8bf1f8055e11 107 SMART SM00530 8 64 2.9E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_00032 2639986748caaa76a62d8bf1f8055e11 107 Gene3D G3DSA:1.10.260.40 4 106 1.1E-17 T 11-10-2018 AMC99_00032 2639986748caaa76a62d8bf1f8055e11 107 Pfam PF13560 Helix-turn-helix domain 5 61 6.8E-13 T 11-10-2018 AMC99_00032 2639986748caaa76a62d8bf1f8055e11 107 SUPERFAMILY SSF47413 3 66 1.52E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_02238 d8f157eb80c57b9caa950eac203867ba 390 SMART SM00244 123 291 2.1E-23 T 11-10-2018 IPR001107 Band 7 domain AMC99_02238 d8f157eb80c57b9caa950eac203867ba 390 Pfam PF01145 SPFH domain / Band 7 family 128 306 2.2E-23 T 11-10-2018 IPR001107 Band 7 domain AMC99_02238 d8f157eb80c57b9caa950eac203867ba 390 Gene3D G3DSA:3.30.479.30 172 282 4.1E-16 T 11-10-2018 AMC99_02238 d8f157eb80c57b9caa950eac203867ba 390 SUPERFAMILY SSF117892 181 297 6.8E-18 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AMC99_02417 7f4171737778bfbfba1078f025fc4cfa 330 Gene3D G3DSA:3.20.20.30 2 329 8.7E-98 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMC99_02417 7f4171737778bfbfba1078f025fc4cfa 330 SUPERFAMILY SSF51679 6 328 1.7E-82 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 AMC99_02417 7f4171737778bfbfba1078f025fc4cfa 330 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 326 1.9E-125 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 AMC99_02417 7f4171737778bfbfba1078f025fc4cfa 330 Pfam PF00296 Luciferase-like monooxygenase 23 303 1.5E-35 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMC99_01631 351295a27d06464045d561b8ad012238 241 Pfam PF01209 ubiE/COQ5 methyltransferase family 11 237 1.1E-26 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AMC99_01631 351295a27d06464045d561b8ad012238 241 Gene3D G3DSA:3.40.50.150 20 239 3.4E-33 T 11-10-2018 AMC99_01631 351295a27d06464045d561b8ad012238 241 SUPERFAMILY SSF53335 3 228 1.7E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 6.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 6.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 6.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 64 75 6.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 6.1E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 64 75 1.4E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 1.4E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 1.4E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 231 1.8E-34 T 11-10-2018 AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 Gene3D G3DSA:3.40.50.720 2 235 2.6E-52 T 11-10-2018 AMC99_01356 8d2599a8df7cafb186304d6d78b054e3 236 SUPERFAMILY SSF51735 4 234 9.02E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82866 292 492 1.83E-42 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:1.20.1640.10 632 1116 4.6E-112 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82714 186 268 7.32E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 5.8E-48 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 5.8E-48 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 5.8E-48 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 5.8E-48 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 5.8E-48 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 5.8E-48 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.8E-48 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.2090.10 182 273 5.0E-153 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.70.1430 674 763 4.6E-112 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:1.20.1640.10 13 512 5.0E-153 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:1.20.1640.10 513 551 5.0E-153 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82866 898 1120 5.75E-41 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82693 676 756 2.62E-8 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.70.1440 764 957 4.6E-112 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.70.1430 43 136 5.0E-153 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82693 143 315 1.94E-8 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82693 43 136 2.96E-24 T 11-10-2018 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Pfam PF00873 AcrB/AcrD/AcrF family 633 1118 4.0E-91 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Pfam PF00873 AcrB/AcrD/AcrF family 7 503 3.6E-122 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.2090.10 812 903 4.6E-112 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 SUPERFAMILY SSF82714 811 900 1.7E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMC99_02633 d10ba51039ae1622e299ea0a44ec329d 1160 Gene3D G3DSA:3.30.70.1320 137 325 5.0E-153 T 11-10-2018 AMC99_01244 dfe35f3b9df4b25b4cbcbd0e95620efe 257 SUPERFAMILY SSF53067 125 254 1.3E-38 T 11-10-2018 AMC99_01244 dfe35f3b9df4b25b4cbcbd0e95620efe 257 Pfam PF03309 Type III pantothenate kinase 2 208 6.2E-67 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMC99_01244 dfe35f3b9df4b25b4cbcbd0e95620efe 257 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 257 35.215 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMC99_01244 dfe35f3b9df4b25b4cbcbd0e95620efe 257 Gene3D G3DSA:3.30.420.40 1 88 1.2E-28 T 11-10-2018 AMC99_01244 dfe35f3b9df4b25b4cbcbd0e95620efe 257 Gene3D G3DSA:3.30.420.40 91 257 6.1E-54 T 11-10-2018 AMC99_01244 dfe35f3b9df4b25b4cbcbd0e95620efe 257 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 253 5.0E-64 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AMC99_01244 dfe35f3b9df4b25b4cbcbd0e95620efe 257 SUPERFAMILY SSF53067 1 122 1.53E-33 T 11-10-2018 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 226 1.9E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 Gene3D G3DSA:2.40.110.10 129 243 1.3E-38 T 11-10-2018 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 126 1.8E-28 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 PIRSF PIRSF016578 21 98 0.04 T 11-10-2018 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 PIRSF PIRSF016578 134 386 2.1E-14 T 11-10-2018 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 239 387 5.3E-42 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 Gene3D G3DSA:1.10.540.10 5 127 3.1E-30 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 SUPERFAMILY SSF47203 238 387 4.51E-48 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 SUPERFAMILY SSF56645 8 251 5.37E-75 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 346 365 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_02177 1799e143085c73caf4e4507b4d456b90 387 Gene3D G3DSA:1.20.140.10 244 387 2.7E-43 T 11-10-2018 AMC99_02268 c48d13f3f401fbeab9a537418a8161cb 391 SUPERFAMILY SSF51735 8 144 9.45E-14 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02268 c48d13f3f401fbeab9a537418a8161cb 391 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 8 135 7.3E-14 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMC99_02268 c48d13f3f401fbeab9a537418a8161cb 391 Gene3D G3DSA:3.40.50.720 7 195 1.0E-37 T 11-10-2018 AMC99_00477 f57e2c90f690473b92c8e24c5e97c01c 411 SUPERFAMILY SSF56601 15 399 1.16E-84 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_00477 f57e2c90f690473b92c8e24c5e97c01c 411 Gene3D G3DSA:3.40.710.10 19 407 1.4E-120 T 11-10-2018 AMC99_00477 f57e2c90f690473b92c8e24c5e97c01c 411 Pfam PF00144 Beta-lactamase 26 389 8.8E-63 T 11-10-2018 IPR001466 Beta-lactamase-related AMC99_01723 8b605be96305dfb1b9027c0e934e52ca 802 Gene3D G3DSA:2.40.170.20 70 802 3.9E-128 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_01723 8b605be96305dfb1b9027c0e934e52ca 802 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 188 2.0E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_01723 8b605be96305dfb1b9027c0e934e52ca 802 SUPERFAMILY SSF56935 55 802 1.37E-105 T 11-10-2018 AMC99_01723 8b605be96305dfb1b9027c0e934e52ca 802 Pfam PF00593 TonB dependent receptor 301 797 6.1E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_01809 70995eb5985a6a0067cf94a0f9640f6b 368 Gene3D G3DSA:3.30.930.10 5 311 2.4E-41 T 11-10-2018 AMC99_01809 70995eb5985a6a0067cf94a0f9640f6b 368 Pfam PF13393 Histidyl-tRNA synthetase 11 307 1.1E-79 T 11-10-2018 AMC99_01809 70995eb5985a6a0067cf94a0f9640f6b 368 SUPERFAMILY SSF55681 8 308 1.19E-37 T 11-10-2018 AMC99_01809 70995eb5985a6a0067cf94a0f9640f6b 368 PIRSF PIRSF001549 7 314 6.1E-31 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AMC99_00606 b1129fca0108ab212f494103898c6d3f 123 SUPERFAMILY SSF54593 4 122 5.78E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00606 b1129fca0108ab212f494103898c6d3f 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 119 3.7E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_00606 b1129fca0108ab212f494103898c6d3f 123 Gene3D G3DSA:3.10.180.10 5 123 5.4E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 Pfam PF01435 Peptidase family M48 23 213 2.1E-30 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 Gene3D G3DSA:3.30.2010.10 15 100 2.2E-9 T 11-10-2018 AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 SMART SM00028 295 328 6.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 SMART SM00028 261 294 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 SMART SM00028 366 399 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 Gene3D G3DSA:1.25.40.10 342 411 6.7E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 Pfam PF13432 Tetratricopeptide repeat 344 388 1.2E-6 T 11-10-2018 AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 Pfam PF13181 Tetratricopeptide repeat 300 327 0.015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 SUPERFAMILY SSF48452 261 389 8.47E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02468 9c94be497a57dddd30fe58e11738d418 441 Gene3D G3DSA:1.25.40.10 254 341 4.4E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00827 9cc0e574a18b626c5f778c2774804436 271 SUPERFAMILY SSF54001 92 247 4.49E-41 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMC99_00827 9cc0e574a18b626c5f778c2774804436 271 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 81 1.0E-17 T 11-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal AMC99_00827 9cc0e574a18b626c5f778c2774804436 271 SMART SM00460 158 222 3.9E-17 T 11-10-2018 IPR002931 Transglutaminase-like AMC99_00827 9cc0e574a18b626c5f778c2774804436 271 Gene3D G3DSA:3.10.620.30 79 257 1.8E-46 T 11-10-2018 AMC99_00827 9cc0e574a18b626c5f778c2774804436 271 Pfam PF01841 Transglutaminase-like superfamily 116 219 4.6E-25 T 11-10-2018 IPR002931 Transglutaminase-like AMC99_00009 33f9530430e01fd118e5750734ff9177 252 Gene3D G3DSA:3.40.50.150 22 252 7.3E-64 T 11-10-2018 AMC99_00009 33f9530430e01fd118e5750734ff9177 252 SUPERFAMILY SSF53335 18 221 4.56E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00009 33f9530430e01fd118e5750734ff9177 252 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 22 246 2.6E-66 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AMC99_00009 33f9530430e01fd118e5750734ff9177 252 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 22 252 33.431 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AMC99_00009 33f9530430e01fd118e5750734ff9177 252 Pfam PF13489 Methyltransferase domain 62 220 1.8E-22 T 11-10-2018 AMC99_01387 8adcb3e31fe79acad8913cf02d07f0ff 475 Gene3D G3DSA:3.40.50.720 13 103 7.9E-17 T 11-10-2018 AMC99_01387 8adcb3e31fe79acad8913cf02d07f0ff 475 Pfam PF08245 Mur ligase middle domain 123 302 1.3E-16 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMC99_01387 8adcb3e31fe79acad8913cf02d07f0ff 475 Pfam PF01225 Mur ligase family, catalytic domain 17 108 2.3E-8 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMC99_01387 8adcb3e31fe79acad8913cf02d07f0ff 475 SUPERFAMILY SSF53244 323 463 2.35E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01387 8adcb3e31fe79acad8913cf02d07f0ff 475 Gene3D G3DSA:3.40.1190.10 108 320 2.5E-42 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01387 8adcb3e31fe79acad8913cf02d07f0ff 475 SUPERFAMILY SSF51984 14 100 2.55E-14 T 11-10-2018 AMC99_01387 8adcb3e31fe79acad8913cf02d07f0ff 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 374 3.0E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMC99_01387 8adcb3e31fe79acad8913cf02d07f0ff 475 Gene3D G3DSA:3.90.190.20 321 473 5.8E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01387 8adcb3e31fe79acad8913cf02d07f0ff 475 SUPERFAMILY SSF53623 113 321 5.36E-40 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 SUPERFAMILY SSF53706 238 765 4.71E-191 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.30.70.20 147 229 1.4E-21 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 SUPERFAMILY SSF54862 93 231 3.47E-37 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 243 918 8.8E-278 T 11-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 SUPERFAMILY SSF54292 20 92 3.85E-20 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 140 5.8E-17 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:2.20.25.90 239 292 4.4E-16 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Pfam PF00037 4Fe-4S binding domain 209 226 4.6E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_00158 a11b197237851ba0928013b8288d99b5 950 SUPERFAMILY SSF50692 777 918 1.15E-39 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 94 3.1E-24 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.40.50.740 300 769 3.9E-169 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 SMART SM00929 101 141 1.7E-19 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 239 292 1.4E-15 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 SMART SM00926 238 292 4.7E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:2.40.40.20 807 920 4.2E-32 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Pfam PF00384 Molybdopterin oxidoreductase 295 725 8.2E-74 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.10.20.740 19 141 4.5E-41 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Gene3D G3DSA:3.40.228.10 375 582 3.9E-169 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 Pfam PF01568 Molydopterin dinucleotide binding domain 810 914 1.0E-25 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 PIRSF PIRSF036643 15 950 0.0 T 11-10-2018 AMC99_00158 a11b197237851ba0928013b8288d99b5 950 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 211 222 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_01319 31e9f538c781328bad8bf1764d49879f 144 SUPERFAMILY SSF54909 51 132 1.79E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMC99_01319 31e9f538c781328bad8bf1764d49879f 144 Gene3D G3DSA:3.30.70.100 2 144 1.1E-41 T 11-10-2018 AMC99_01319 31e9f538c781328bad8bf1764d49879f 144 Pfam PF07045 Domain of unknown function (DUF1330) 54 127 1.5E-7 T 11-10-2018 IPR010753 Domain of unknown function DUF1330 AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 Pfam PF00571 CBS domain 91 139 5.3E-11 T 11-10-2018 IPR000644 CBS domain AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 Pfam PF00571 CBS domain 147 200 7.8E-8 T 11-10-2018 IPR000644 CBS domain AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 6 452 1.7E-188 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 Gene3D G3DSA:3.20.20.70 2 483 1.8E-209 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 SMART SM01240 5 470 0.0 T 11-10-2018 AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 PIRSF PIRSF000130 1 484 5.8E-199 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 6 483 82.613 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 292 304 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 SMART SM00116 94 142 1.8E-11 T 11-10-2018 IPR000644 CBS domain AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 SMART SM00116 155 203 4.0E-7 T 11-10-2018 IPR000644 CBS domain AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 470 1.7E-155 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 SUPERFAMILY SSF54631 91 202 1.16E-32 T 11-10-2018 AMC99_01342 76d78cf7a5ffc40792cc2b2ba14fe771 484 SUPERFAMILY SSF51412 4 474 6.54E-117 T 11-10-2018 AMC99_01845 3995a23b4be7c88bd90fa0ffa4679e52 265 SUPERFAMILY SSF52402 28 213 5.18E-49 T 11-10-2018 AMC99_01845 3995a23b4be7c88bd90fa0ffa4679e52 265 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 54 225 3.8E-43 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMC99_01845 3995a23b4be7c88bd90fa0ffa4679e52 265 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 47 248 1.5E-56 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMC99_01845 3995a23b4be7c88bd90fa0ffa4679e52 265 Gene3D G3DSA:3.40.50.620 19 253 1.5E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01845 3995a23b4be7c88bd90fa0ffa4679e52 265 PIRSF PIRSF000857 5 254 6.7E-83 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMC99_01845 3995a23b4be7c88bd90fa0ffa4679e52 265 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 13 249 35.732 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 AMC99_00874 fea5720868268b40f8d9afa2906ad08d 195 Gene3D G3DSA:1.10.8.60 118 185 6.5E-8 T 11-10-2018 AMC99_00874 fea5720868268b40f8d9afa2906ad08d 195 Pfam PF00308 Bacterial dnaA protein 68 157 8.4E-7 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AMC99_00874 fea5720868268b40f8d9afa2906ad08d 195 SUPERFAMILY SSF52540 8 164 1.04E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00874 fea5720868268b40f8d9afa2906ad08d 195 Gene3D G3DSA:3.40.50.300 50 115 2.5E-5 T 11-10-2018 AMC99_00421 ddf0c52c2a0de4dcad464122d168ca84 362 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMC99_00421 ddf0c52c2a0de4dcad464122d168ca84 362 Gene3D G3DSA:3.90.180.10 12 358 8.8E-112 T 11-10-2018 AMC99_00421 ddf0c52c2a0de4dcad464122d168ca84 362 SUPERFAMILY SSF51735 154 325 1.53E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00421 ddf0c52c2a0de4dcad464122d168ca84 362 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 148 5.8E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_00421 ddf0c52c2a0de4dcad464122d168ca84 362 Gene3D G3DSA:3.40.50.720 169 304 8.8E-112 T 11-10-2018 AMC99_00421 ddf0c52c2a0de4dcad464122d168ca84 362 SUPERFAMILY SSF50129 314 361 2.59E-9 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_00421 ddf0c52c2a0de4dcad464122d168ca84 362 SUPERFAMILY SSF50129 3 188 3.46E-55 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_00421 ddf0c52c2a0de4dcad464122d168ca84 362 Pfam PF00107 Zinc-binding dehydrogenase 192 319 1.8E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_00421 ddf0c52c2a0de4dcad464122d168ca84 362 SMART SM00829 11 359 1.9E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_00367 03733104d7a0854450a201160e5510f8 153 ProSitePatterns PS00818 Dps protein family signature 1. 34 50 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMC99_00367 03733104d7a0854450a201160e5510f8 153 PIRSF PIRSF005900 2 153 6.2E-39 T 11-10-2018 IPR002177 DNA-binding protein Dps AMC99_00367 03733104d7a0854450a201160e5510f8 153 Pfam PF00210 Ferritin-like domain 15 152 2.0E-24 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMC99_00367 03733104d7a0854450a201160e5510f8 153 SUPERFAMILY SSF47240 8 152 1.41E-35 T 11-10-2018 IPR009078 Ferritin-like superfamily AMC99_00367 03733104d7a0854450a201160e5510f8 153 Gene3D G3DSA:1.20.1260.10 4 153 8.3E-43 T 11-10-2018 IPR012347 Ferritin-like AMC99_00367 03733104d7a0854450a201160e5510f8 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 58 74 1.6E-5 T 11-10-2018 IPR002177 DNA-binding protein Dps AMC99_00367 03733104d7a0854450a201160e5510f8 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 130 148 1.6E-5 T 11-10-2018 IPR002177 DNA-binding protein Dps AMC99_00367 03733104d7a0854450a201160e5510f8 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 34 50 1.6E-5 T 11-10-2018 IPR002177 DNA-binding protein Dps AMC99_02314 3022c6bf017b4849ba40c7f2ca061894 213 Pfam PF01553 Acyltransferase 47 150 2.0E-14 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMC99_02314 3022c6bf017b4849ba40c7f2ca061894 213 SUPERFAMILY SSF69593 16 183 7.19E-23 T 11-10-2018 AMC99_02314 3022c6bf017b4849ba40c7f2ca061894 213 SMART SM00563 43 155 7.1E-19 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMC99_00108 bee816015011bcb6daa78163f6ca3637 383 SUPERFAMILY SSF81901 42 183 9.59E-8 T 11-10-2018 AMC99_00108 bee816015011bcb6daa78163f6ca3637 383 Gene3D G3DSA:1.25.40.10 34 249 3.1E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 Pfam PF00326 Prolyl oligopeptidase family 520 736 1.2E-62 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 SUPERFAMILY SSF53474 468 714 3.97E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 56 458 4.1E-89 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 Gene3D G3DSA:3.40.50.1820 75 731 4.1E-244 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 554 1.7E-47 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 558 577 1.7E-47 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 608 1.7E-47 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 647 662 1.7E-47 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 522 1.7E-47 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 665 687 1.7E-47 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 SUPERFAMILY SSF50993 54 465 3.14E-93 T 11-10-2018 AMC99_02336 7267758ab0339b2cde18ddc71151a849 744 Gene3D G3DSA:2.130.10.120 129 459 4.1E-244 T 11-10-2018 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 272 294 3.6E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 3.6E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 432 454 3.6E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 Pfam PF00361 Proton-conducting membrane transporter 133 433 7.4E-87 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 4.3E-66 T 11-10-2018 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 232 253 4.3E-66 T 11-10-2018 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 322 334 4.3E-66 T 11-10-2018 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 4.3E-66 T 11-10-2018 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 254 280 4.3E-66 T 11-10-2018 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 4.3E-66 T 11-10-2018 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 433 452 4.3E-66 T 11-10-2018 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 Pfam PF06455 NADH dehydrogenase subunit 5 C-terminus 487 658 1.6E-11 T 11-10-2018 IPR010934 NADH dehydrogenase subunit 5, C-terminal GO:0008137|GO:0042773|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 661 1.8E-250 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01248 b456dc44cad5a430f1dffb0f8b2d85b4 663 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 65 121 2.0E-25 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_02733 7f2408b4f727a38eab5f9ab81eea9c37 143 Pfam PF02566 OsmC-like protein 43 139 2.8E-19 T 11-10-2018 IPR003718 OsmC/Ohr family AMC99_02733 7f2408b4f727a38eab5f9ab81eea9c37 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 1.6E-57 T 11-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 AMC99_02733 7f2408b4f727a38eab5f9ab81eea9c37 143 SUPERFAMILY SSF82784 1 141 9.03E-38 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AMC99_02733 7f2408b4f727a38eab5f9ab81eea9c37 143 Gene3D G3DSA:3.30.300.20 1 141 2.6E-41 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMC99_01350 18e62b3cc939fdfd2419747d0d213f65 218 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 41 200 2.8E-26 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01350 18e62b3cc939fdfd2419747d0d213f65 218 SUPERFAMILY SSF50891 37 211 9.2E-31 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMC99_01350 18e62b3cc939fdfd2419747d0d213f65 218 Gene3D G3DSA:2.40.100.10 36 213 1.2E-35 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 Gene3D G3DSA:3.40.50.300 214 357 5.4E-74 T 11-10-2018 AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 SUPERFAMILY SSF116878 119 425 9.42E-33 T 11-10-2018 AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 SUPERFAMILY SSF52540 213 350 2.95E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 Pfam PF01926 50S ribosome-binding GTPase 215 300 1.5E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 SUPERFAMILY SSF103025 3 118 1.26E-35 T 11-10-2018 AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 Gene3D G3DSA:1.20.120.430 120 425 5.4E-74 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 Pfam PF12631 MnmE helical domain 121 422 4.0E-32 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 303 2.7E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 Gene3D G3DSA:3.30.1360.120 1 119 2.6E-37 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 425 27.942 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AMC99_02550 d685497f78e8bcc86a4c18ac46d07768 425 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 118 3.0E-34 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AMC99_01900 fbdf20152914d94b4c414c4f9e9c9628 182 SUPERFAMILY SSF82153 21 175 1.44E-17 T 11-10-2018 IPR036378 FAS1 domain superfamily AMC99_01900 fbdf20152914d94b4c414c4f9e9c9628 182 SMART SM00554 68 178 6.9E-8 T 11-10-2018 IPR000782 FAS1 domain AMC99_01900 fbdf20152914d94b4c414c4f9e9c9628 182 Gene3D G3DSA:2.30.180.10 31 177 1.0E-17 T 11-10-2018 IPR036378 FAS1 domain superfamily AMC99_01900 fbdf20152914d94b4c414c4f9e9c9628 182 Pfam PF02469 Fasciclin domain 44 175 1.7E-12 T 11-10-2018 IPR000782 FAS1 domain AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 SMART SM00534 624 811 9.0E-105 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 SUPERFAMILY SSF52540 581 815 3.3E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Pfam PF05188 MutS domain II 144 253 3.1E-10 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Gene3D G3DSA:3.30.420.110 143 266 1.2E-14 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 SUPERFAMILY SSF55271 8 131 6.02E-36 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 12 872 5.5E-243 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 11 867 21.96 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Gene3D G3DSA:3.40.1170.10 3 137 2.1E-43 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Pfam PF05190 MutS family domain IV 440 530 1.3E-18 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Gene3D G3DSA:3.40.50.300 582 878 1.6E-96 T 11-10-2018 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Gene3D G3DSA:1.10.1420.10 275 571 2.3E-72 T 11-10-2018 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 SUPERFAMILY SSF48334 276 578 5.49E-68 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 705 721 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Gene3D G3DSA:1.10.1420.10 396 517 2.3E-72 T 11-10-2018 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 SUPERFAMILY SSF53150 133 286 2.09E-28 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Pfam PF01624 MutS domain I 12 135 8.5E-37 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Pfam PF05192 MutS domain III 278 572 4.9E-30 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 PIRSF PIRSF037677 4 180 3.9E-34 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 PIRSF PIRSF037677 236 822 4.3E-113 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 Pfam PF00488 MutS domain V 627 814 3.8E-80 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMC99_02759 62d04d6ae21310014bb4bbfe63fdfe80 880 SMART SM00533 292 605 3.2E-62 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 Pfam PF00067 Cytochrome P450 286 377 7.7E-14 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 Pfam PF00067 Cytochrome P450 78 275 7.6E-10 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 353 362 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 SUPERFAMILY SSF48264 16 409 1.57E-87 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 Gene3D G3DSA:1.10.630.10 2 409 7.5E-118 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 360 371 3.7E-44 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 302 329 3.7E-44 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 351 360 3.7E-44 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 94 105 3.7E-44 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 203 225 3.7E-44 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 330 345 3.7E-44 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 285 296 3.7E-44 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02081 fded271dbf8da4704cb38ca84677b70a 409 PRINTS PR00359 B-class P450 signature 140 156 3.7E-44 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 SMART SM00878 340 444 1.3E-42 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 SUPERFAMILY SSF56059 82 350 1.47E-67 T 11-10-2018 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 SUPERFAMILY SSF52440 1 112 6.69E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 SUPERFAMILY SSF51246 335 450 1.57E-31 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 326 6.2E-73 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 Gene3D G3DSA:2.40.50.100 544 618 5.8E-23 T 11-10-2018 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 Pfam PF02785 Biotin carboxylase C-terminal domain 340 444 2.2E-28 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 SUPERFAMILY SSF51230 547 618 6.94E-21 T 11-10-2018 IPR011053 Single hybrid motif AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 Pfam PF00364 Biotin-requiring enzyme 552 616 1.6E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 Gene3D G3DSA:3.30.470.130 1 451 2.4E-192 T 11-10-2018 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 3.9E-45 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00375 16be161cd6263a68afc037a98b7d5c54 622 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 574 591 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00531 3f5683f4636c58d054d60592c4ff4a05 294 SUPERFAMILY SSF51197 24 288 3.71E-28 T 11-10-2018 AMC99_00531 3f5683f4636c58d054d60592c4ff4a05 294 SMART SM00558 95 258 8.1E-4 T 11-10-2018 IPR003347 JmjC domain AMC99_00531 3f5683f4636c58d054d60592c4ff4a05 294 Gene3D G3DSA:2.60.120.650 14 244 1.5E-17 T 11-10-2018 AMC99_00204 68d30b0dfb7f56d4763d63724e1c9f67 235 Pfam PF01183 Glycosyl hydrolases family 25 59 198 5.3E-14 T 11-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 AMC99_00204 68d30b0dfb7f56d4763d63724e1c9f67 235 Gene3D G3DSA:3.20.20.80 36 222 2.3E-24 T 11-10-2018 AMC99_00204 68d30b0dfb7f56d4763d63724e1c9f67 235 SUPERFAMILY SSF51445 45 213 2.0E-23 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMC99_00015 4c843fdd3d8556a73c3bf1a961f58290 558 SUPERFAMILY SSF54523 462 558 1.05E-10 T 11-10-2018 AMC99_00015 4c843fdd3d8556a73c3bf1a961f58290 558 Pfam PF03895 YadA-like membrane anchor domain 502 558 2.4E-9 T 11-10-2018 IPR005594 YadA-like, C-terminal AMC99_00015 4c843fdd3d8556a73c3bf1a961f58290 558 Gene3D G3DSA:1.20.5.340 343 437 1.1E-10 T 11-10-2018 AMC99_00015 4c843fdd3d8556a73c3bf1a961f58290 558 Gene3D G3DSA:3.30.1300.30 454 558 1.5E-14 T 11-10-2018 AMC99_02537 211349d26d9d1f66631eaeb9761c7997 234 SUPERFAMILY SSF53098 1 168 1.95E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMC99_02537 211349d26d9d1f66631eaeb9761c7997 234 SMART SM00479 2 172 1.6E-44 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMC99_02537 211349d26d9d1f66631eaeb9761c7997 234 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 2.9E-80 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02537 211349d26d9d1f66631eaeb9761c7997 234 Gene3D G3DSA:3.30.420.10 2 172 4.5E-52 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMC99_02537 211349d26d9d1f66631eaeb9761c7997 234 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 170 1.1E-48 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_02537 211349d26d9d1f66631eaeb9761c7997 234 Pfam PF00929 Exonuclease 4 163 3.6E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMC99_00359 e7ad48de3f298c243464248f180c94de 553 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 266 321 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00359 e7ad48de3f298c243464248f180c94de 553 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 77 506 5.4E-115 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00359 e7ad48de3f298c243464248f180c94de 553 Gene3D G3DSA:1.20.210.10 65 534 2.3E-191 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00359 e7ad48de3f298c243464248f180c94de 553 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 71 528 7.9E-227 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AMC99_00359 e7ad48de3f298c243464248f180c94de 553 SUPERFAMILY SSF81442 71 548 1.57E-123 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_01635 c90d447329e80575f8bae5a62a27008a 351 PIRSF PIRSF002465 3 341 1.5E-119 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMC99_01635 c90d447329e80575f8bae5a62a27008a 351 Gene3D G3DSA:3.40.718.10 4 348 2.3E-120 T 11-10-2018 AMC99_01635 c90d447329e80575f8bae5a62a27008a 351 SUPERFAMILY SSF53659 4 337 2.26E-98 T 11-10-2018 AMC99_01635 c90d447329e80575f8bae5a62a27008a 351 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 336 1.8E-102 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMC99_01635 c90d447329e80575f8bae5a62a27008a 351 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 343 136.295 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AMC99_01635 c90d447329e80575f8bae5a62a27008a 351 Pfam PF02504 Fatty acid synthesis protein 5 328 6.2E-104 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AMC99_01472 c2f28382e0904458c7681c1fabf4d906 647 SUPERFAMILY SSF53955 488 629 8.66E-38 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMC99_01472 c2f28382e0904458c7681c1fabf4d906 647 SUPERFAMILY SSF48435 46 469 3.27E-39 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AMC99_01472 c2f28382e0904458c7681c1fabf4d906 647 Pfam PF01464 Transglycosylase SLT domain 488 592 8.2E-24 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AMC99_01472 c2f28382e0904458c7681c1fabf4d906 647 Gene3D G3DSA:1.10.530.10 483 634 3.6E-41 T 11-10-2018 AMC99_01106 f54fd5d15ef1ada49aa91b9ca4baebcf 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 176 31.538 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMC99_01106 f54fd5d15ef1ada49aa91b9ca4baebcf 189 Gene3D G3DSA:3.40.50.1470 1 187 3.2E-61 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AMC99_01106 f54fd5d15ef1ada49aa91b9ca4baebcf 189 Pfam PF01195 Peptidyl-tRNA hydrolase 5 163 9.6E-47 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMC99_01106 f54fd5d15ef1ada49aa91b9ca4baebcf 189 SUPERFAMILY SSF53178 1 182 9.02E-62 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AMC99_01106 f54fd5d15ef1ada49aa91b9ca4baebcf 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 162 4.0E-52 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMC99_01106 f54fd5d15ef1ada49aa91b9ca4baebcf 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 329 45.068 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 5.5E-66 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 PIRSF PIRSF000116 202 333 4.2E-12 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 PIRSF PIRSF000116 4 210 4.9E-44 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 Gene3D G3DSA:1.10.3730.40 183 339 1.0E-73 T 11-10-2018 AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 2.3E-73 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 SUPERFAMILY SSF48179 184 333 4.25E-71 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 SUPERFAMILY SSF51735 1 183 2.47E-74 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 9.6E-130 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AMC99_01046 043b6c9d1febb47f590a8c145509e5db 339 Gene3D G3DSA:3.40.50.720 1 182 2.1E-75 T 11-10-2018 AMC99_01893 e1c164845450e2147c0654218659c021 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMC99_01893 e1c164845450e2147c0654218659c021 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMC99_01893 e1c164845450e2147c0654218659c021 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 2.6E-194 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_01893 e1c164845450e2147c0654218659c021 469 SMART SM01230 103 379 9.8E-142 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_01893 e1c164845450e2147c0654218659c021 469 Gene3D G3DSA:3.10.20.70 3 105 2.1E-36 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_01893 e1c164845450e2147c0654218659c021 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_01893 e1c164845450e2147c0654218659c021 469 Pfam PF00120 Glutamine synthetase, catalytic domain 104 466 6.4E-135 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_01893 e1c164845450e2147c0654218659c021 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 96 2.6E-28 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AMC99_01893 e1c164845450e2147c0654218659c021 469 Gene3D G3DSA:3.30.590.10 106 455 1.5E-138 T 11-10-2018 AMC99_01893 e1c164845450e2147c0654218659c021 469 SUPERFAMILY SSF55931 104 468 5.98E-136 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMC99_01893 e1c164845450e2147c0654218659c021 469 SUPERFAMILY SSF54368 4 102 6.02E-34 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 18 527 9.7E-171 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 PIRSF PIRSF000171 8 310 1.2E-25 T 11-10-2018 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 PIRSF PIRSF000171 344 539 3.0E-14 T 11-10-2018 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 Gene3D G3DSA:3.50.50.60 19 411 1.6E-150 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 SUPERFAMILY SSF56425 243 360 6.73E-37 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 449 530 1.0E-13 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 Pfam PF00890 FAD binding domain 19 399 5.2E-95 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 SUPERFAMILY SSF46977 432 533 1.31E-30 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 19 41 7.8E-5 T 11-10-2018 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 384 7.8E-5 T 11-10-2018 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 Gene3D G3DSA:3.90.700.10 253 365 1.6E-150 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 Gene3D G3DSA:1.20.58.100 432 540 4.7E-40 T 11-10-2018 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 SUPERFAMILY SSF51905 16 455 4.47E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 20 39 1.4E-10 T 11-10-2018 AMC99_02291 3cd9d1f8b5ad59b8d64d01d3bea503b5 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 384 1.4E-10 T 11-10-2018 AMC99_01470 40effe29db9a08de221eaf2cc422f016 160 Gene3D G3DSA:2.40.280.10 8 136 3.2E-49 T 11-10-2018 IPR023620 Small protein B AMC99_01470 40effe29db9a08de221eaf2cc422f016 160 SUPERFAMILY SSF74982 11 139 2.62E-50 T 11-10-2018 IPR023620 Small protein B AMC99_01470 40effe29db9a08de221eaf2cc422f016 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 73.117 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMC99_01470 40effe29db9a08de221eaf2cc422f016 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 156 3.3E-56 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMC99_01470 40effe29db9a08de221eaf2cc422f016 160 Pfam PF01668 SmpB protein 15 157 5.3E-62 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMC99_01470 40effe29db9a08de221eaf2cc422f016 160 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site AMC99_01470 40effe29db9a08de221eaf2cc422f016 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 7.0E-58 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AMC99_01133 ceb5e23e16da6e1e79675557d7eedaa6 465 SMART SM00283 30 293 3.5E-21 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_01133 ceb5e23e16da6e1e79675557d7eedaa6 465 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 111 251 3.3E-26 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_01133 ceb5e23e16da6e1e79675557d7eedaa6 465 SUPERFAMILY SSF58104 29 287 9.81E-44 T 11-10-2018 AMC99_01133 ceb5e23e16da6e1e79675557d7eedaa6 465 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 205 234 1.4E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMC99_01133 ceb5e23e16da6e1e79675557d7eedaa6 465 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 128 155 1.4E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMC99_01133 ceb5e23e16da6e1e79675557d7eedaa6 465 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 157 186 1.4E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMC99_01133 ceb5e23e16da6e1e79675557d7eedaa6 465 Gene3D G3DSA:1.10.287.950 7 295 6.6E-41 T 11-10-2018 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 74 21.164 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 3.9E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 3.9E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 3.9E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 3.9E-17 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 Pfam PF01084 Ribosomal protein S18 20 69 2.3E-25 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 Gene3D G3DSA:4.10.640.10 1 74 1.3E-27 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 ProSitePatterns PS00057 Ribosomal protein S18 signature. 22 45 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 TIGRFAM TIGR00165 S18: ribosomal protein bS18 5 73 2.9E-29 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 SUPERFAMILY SSF46911 3 74 3.14E-27 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01391 515a7fd32c8c7bc6a9ab954e646261d2 74 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 22 74 3.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01233 4a5c765633ee025442d519559fb32a99 726 Pfam PF03772 Competence protein 270 551 1.3E-55 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AMC99_01233 4a5c765633ee025442d519559fb32a99 726 Pfam PF13567 Domain of unknown function (DUF4131) 73 225 2.2E-12 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 AMC99_01233 4a5c765633ee025442d519559fb32a99 726 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 290 482 6.9E-21 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AMC99_02688 301ff4d6de694303170006163218af0f 333 Gene3D G3DSA:3.40.190.90 138 304 5.3E-126 T 11-10-2018 AMC99_02688 301ff4d6de694303170006163218af0f 333 PIRSF PIRSF004532 16 333 1.2E-132 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMC99_02688 301ff4d6de694303170006163218af0f 333 SUPERFAMILY SSF56655 16 331 6.71E-100 T 11-10-2018 AMC99_02688 301ff4d6de694303170006163218af0f 333 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 19 330 1.5E-133 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMC99_02688 301ff4d6de694303170006163218af0f 333 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 17 331 7.1E-104 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AMC99_02688 301ff4d6de694303170006163218af0f 333 Gene3D G3DSA:3.30.540.10 20 330 5.3E-126 T 11-10-2018 AMC99_00929 2e09c47fb8b55b8eeb2d0e1163ab47cf 256 SUPERFAMILY SSF102198 3 254 6.93E-52 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMC99_00929 2e09c47fb8b55b8eeb2d0e1163ab47cf 256 Gene3D G3DSA:3.50.30.50 2 255 7.5E-46 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMC99_00929 2e09c47fb8b55b8eeb2d0e1163ab47cf 256 Pfam PF04199 Putative cyclase 5 184 2.2E-34 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 SUPERFAMILY SSF81301 193 360 4.09E-58 T 11-10-2018 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 SUPERFAMILY SSF81271 374 443 8.07E-20 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 Gene3D G3DSA:3.30.70.260 622 696 3.1E-10 T 11-10-2018 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 SUPERFAMILY SSF109604 6 191 3.3E-64 T 11-10-2018 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 Pfam PF13291 ACT domain 622 695 6.2E-12 T 11-10-2018 IPR002912 ACT domain AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 Gene3D G3DSA:1.10.3210.10 2 191 9.1E-72 T 11-10-2018 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 693 6.9E-201 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 Gene3D G3DSA:3.10.20.30 378 451 8.6E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 SUPERFAMILY SSF55021 625 694 1.41E-7 T 11-10-2018 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 SMART SM00954 236 346 9.7E-63 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 Pfam PF13328 HD domain 26 176 1.1E-49 T 11-10-2018 IPR003607 HD/PDEase domain AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 Gene3D G3DSA:3.30.460.10 194 326 2.4E-46 T 11-10-2018 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 Pfam PF02824 TGS domain 384 443 1.5E-20 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 Pfam PF04607 Region found in RelA / SpoT proteins 236 345 3.0E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 AMC99_00455 83c4f7f1838a8d716865a6a018bb2b0a 696 SMART SM00471 41 153 5.9E-10 T 11-10-2018 IPR003607 HD/PDEase domain AMC99_00175 f6510b9392b3bfca7fb86292dafdeae0 324 Pfam PF00535 Glycosyl transferase family 2 13 162 4.5E-9 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMC99_00175 f6510b9392b3bfca7fb86292dafdeae0 324 SUPERFAMILY SSF53448 11 232 5.85E-19 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00175 f6510b9392b3bfca7fb86292dafdeae0 324 Gene3D G3DSA:3.90.550.10 5 253 7.5E-16 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 115 8.1E-48 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.5E-37 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.5E-37 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 PRINTS PR00061 Ribosomal protein L19 signature 90 115 1.5E-37 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 SUPERFAMILY SSF50104 1 115 6.92E-46 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 PIRSF PIRSF002191 1 123 1.2E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 Gene3D G3DSA:2.30.30.790 10 119 4.2E-16 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 Pfam PF01245 Ribosomal protein L19 2 115 1.7E-47 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01410 b9b3e5a7ea269f730f58cd7a4beab9f0 123 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 116 31.046 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01124 08ea6ea0fdbb2544ffbecd886974155b 305 Gene3D G3DSA:3.40.50.1100 5 298 1.8E-104 T 11-10-2018 AMC99_01124 08ea6ea0fdbb2544ffbecd886974155b 305 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 AMC99_01124 08ea6ea0fdbb2544ffbecd886974155b 305 SUPERFAMILY SSF53686 4 301 6.42E-85 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_01124 08ea6ea0fdbb2544ffbecd886974155b 305 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 286 2.7E-60 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMC99_01124 08ea6ea0fdbb2544ffbecd886974155b 305 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 300 3.7E-112 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AMC99_01124 08ea6ea0fdbb2544ffbecd886974155b 305 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 300 4.2E-109 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 AMC99_01124 08ea6ea0fdbb2544ffbecd886974155b 305 Gene3D G3DSA:3.40.50.1100 42 141 1.8E-104 T 11-10-2018 AMC99_00705 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 Pfam PF08534 Redoxin 38 164 8.1E-15 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMC99_00705 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 SUPERFAMILY SSF52833 59 171 1.36E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00705 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 Gene3D G3DSA:3.40.30.10 20 174 3.6E-35 T 11-10-2018 AMC99_00705 ea96fc2a2ee2f26ff66061c6a4d1fd67 176 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 8 163 8.7E-38 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 AMC99_01433 edba450ecb512a5aa75674fc0bcf46aa 62 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 15 62 3.0E-13 T 11-10-2018 AMC99_01433 edba450ecb512a5aa75674fc0bcf46aa 62 Pfam PF13617 YnbE-like lipoprotein 10 60 1.0E-14 T 11-10-2018 IPR025985 YnbE-like lipoprotein AMC99_00843 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 Gene3D G3DSA:1.20.1050.90 123 298 2.7E-75 T 11-10-2018 AMC99_00843 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMC99_00843 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 SUPERFAMILY SSF52540 1 331 1.16E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00843 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 332 2.0E-17 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AMC99_00843 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 358 78.113 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMC99_00843 c0a2e6cc5b28fd94b3f51549a4c1d05c 358 Gene3D G3DSA:3.40.50.300 6 334 2.7E-75 T 11-10-2018 AMC99_01394 287e2cbeba4b215d0c1aff45b8da955d 479 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 7 479 6.4E-205 T 11-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMC99_01394 287e2cbeba4b215d0c1aff45b8da955d 479 SUPERFAMILY SSF53167 5 479 1.14E-151 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 AMC99_01394 287e2cbeba4b215d0c1aff45b8da955d 479 Gene3D G3DSA:3.30.1730.10 2 169 6.4E-47 T 11-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMC99_01394 287e2cbeba4b215d0c1aff45b8da955d 479 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 7 163 1.7E-48 T 11-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMC99_01394 287e2cbeba4b215d0c1aff45b8da955d 479 Hamap MF_01932 AMP nucleosidase [amn]. 1 479 55.111 T 11-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 AMC99_01394 287e2cbeba4b215d0c1aff45b8da955d 479 Gene3D G3DSA:3.40.50.1580 170 479 2.1E-107 T 11-10-2018 AMC99_01394 287e2cbeba4b215d0c1aff45b8da955d 479 Pfam PF01048 Phosphorylase superfamily 267 429 5.4E-19 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMC99_02725 26005cf4d14e8588b093bc1839f76d36 729 Pfam PF13550 Putative phage tail protein 275 390 4.2E-11 T 11-10-2018 IPR032876 Tip attachment protein J AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 466 576 7.9E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 531 4.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 517 4.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 556 4.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 575 4.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Gene3D G3DSA:3.40.50.2300 591 710 7.2E-15 T 11-10-2018 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF13426 PAS domain 239 344 1.7E-11 T 11-10-2018 IPR000014 PAS domain AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Gene3D G3DSA:1.20.1440.210 51 175 3.5E-20 T 11-10-2018 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Gene3D G3DSA:1.10.287.130 347 422 1.3E-25 T 11-10-2018 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF00512 His Kinase A (phospho-acceptor) domain 352 420 1.5E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 SMART SM00086 304 346 0.0051 T 11-10-2018 IPR001610 PAC motif AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Gene3D G3DSA:3.30.450.20 225 346 3.0E-22 T 11-10-2018 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF00072 Response regulator receiver domain 594 674 1.2E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 SUPERFAMILY SSF55785 239 351 2.62E-19 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 SMART SM00388 352 420 4.4E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Gene3D G3DSA:3.30.565.10 423 580 2.9E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 SUPERFAMILY SSF55874 409 581 2.36E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 SUPERFAMILY SSF52172 594 702 8.68E-13 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 Pfam PF05227 CHASE3 domain 47 177 4.3E-25 T 11-10-2018 IPR007891 CHASE3 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 SUPERFAMILY SSF47384 339 422 4.71E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 SMART SM00387 466 578 9.1E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 SMART SM00091 228 295 1.8E-7 T 11-10-2018 IPR000014 PAS domain AMC99_02105 fe90deebb5a2b969be2aca64f0209c62 710 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 229 351 8.2E-20 T 11-10-2018 IPR000014 PAS domain AMC99_02334 8f18be1f2907748ae48795fe3d2a7c43 576 Pfam PF07695 7TM diverse intracellular signalling 179 379 4.2E-17 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 AMC99_02334 8f18be1f2907748ae48795fe3d2a7c43 576 Gene3D G3DSA:3.30.70.270 389 556 8.6E-41 T 11-10-2018 AMC99_02334 8f18be1f2907748ae48795fe3d2a7c43 576 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 553 2.2E-30 T 11-10-2018 IPR000160 GGDEF domain AMC99_02334 8f18be1f2907748ae48795fe3d2a7c43 576 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 398 556 2.4E-32 T 11-10-2018 IPR000160 GGDEF domain AMC99_02334 8f18be1f2907748ae48795fe3d2a7c43 576 SMART SM00267 391 557 4.0E-34 T 11-10-2018 IPR000160 GGDEF domain AMC99_02334 8f18be1f2907748ae48795fe3d2a7c43 576 SUPERFAMILY SSF55073 407 555 2.98E-32 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_01129 f70b9dc37c064c0f2dfd267614a0940b 400 PIRSF PIRSF016719 1 400 3.5E-95 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 AMC99_01129 f70b9dc37c064c0f2dfd267614a0940b 400 Pfam PF07075 Protein of unknown function (DUF1343) 25 400 1.7E-101 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 AMC99_01129 f70b9dc37c064c0f2dfd267614a0940b 400 Gene3D G3DSA:3.90.1150.140 221 385 3.2E-98 T 11-10-2018 AMC99_01129 f70b9dc37c064c0f2dfd267614a0940b 400 Gene3D G3DSA:3.40.50.12170 6 400 3.2E-98 T 11-10-2018 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Gene3D G3DSA:3.90.700.10 256 359 1.1E-163 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 SUPERFAMILY SSF56425 246 364 4.93E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 SUPERFAMILY SSF46977 461 607 3.53E-46 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Pfam PF00890 FAD binding domain 15 415 7.4E-119 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Pfam PF02910 Fumarate reductase flavoprotein C-term 470 607 2.7E-43 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Gene3D G3DSA:1.20.58.100 443 555 1.3E-38 T 11-10-2018 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 PIRSF PIRSF000171 5 594 2.5E-35 T 11-10-2018 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 15 607 3.6E-234 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 12 607 7.4E-277 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Gene3D G3DSA:3.50.50.60 15 425 1.1E-163 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 49 58 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 SUPERFAMILY SSF51905 5 437 2.76E-69 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01353 e4a28adbe7888f56390a6e2d1dc2e0f8 607 Gene3D G3DSA:4.10.80.40 556 607 2.9E-9 T 11-10-2018 AMC99_02704 8361638ed4377975d30d093575d8e636 191 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 96 4.3E-10 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AMC99_02704 8361638ed4377975d30d093575d8e636 191 Gene3D G3DSA:2.30.110.10 5 128 2.2E-19 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMC99_02704 8361638ed4377975d30d093575d8e636 191 SUPERFAMILY SSF50475 8 132 1.44E-11 T 11-10-2018 AMC99_00513 080428529cf7757745811dfa9c2b754b 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 6 646 51.102 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AMC99_00513 080428529cf7757745811dfa9c2b754b 649 SUPERFAMILY SSF56801 21 643 1.57E-178 T 11-10-2018 AMC99_00513 080428529cf7757745811dfa9c2b754b 649 Pfam PF00501 AMP-binding enzyme 90 523 7.7E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_00513 080428529cf7757745811dfa9c2b754b 649 Gene3D G3DSA:3.40.50.12780 55 516 9.6E-106 T 11-10-2018 AMC99_00513 080428529cf7757745811dfa9c2b754b 649 Gene3D G3DSA:3.30.300.30 519 648 2.7E-29 T 11-10-2018 AMC99_00513 080428529cf7757745811dfa9c2b754b 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 262 273 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_00513 080428529cf7757745811dfa9c2b754b 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 1.0E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_00513 080428529cf7757745811dfa9c2b754b 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 28 83 5.2E-25 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AMC99_00513 080428529cf7757745811dfa9c2b754b 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 24 643 7.1E-304 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 AMC99_02070 8995f3cc4e79e35a0ea0101c888ae1b1 354 SUPERFAMILY SSF52738 160 346 2.09E-55 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AMC99_02070 8995f3cc4e79e35a0ea0101c888ae1b1 354 Gene3D G3DSA:3.40.50.2300 4 158 8.4E-22 T 11-10-2018 AMC99_02070 8995f3cc4e79e35a0ea0101c888ae1b1 354 PIRSF PIRSF000876 3 351 1.3E-102 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_02070 8995f3cc4e79e35a0ea0101c888ae1b1 354 Gene3D G3DSA:3.40.50.180 159 347 1.5E-57 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal AMC99_02070 8995f3cc4e79e35a0ea0101c888ae1b1 354 SUPERFAMILY SSF52172 5 112 6.26E-23 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02070 8995f3cc4e79e35a0ea0101c888ae1b1 354 Pfam PF00072 Response regulator receiver domain 8 111 6.9E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02070 8995f3cc4e79e35a0ea0101c888ae1b1 354 Pfam PF01339 CheB methylesterase 166 344 1.8E-47 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_02070 8995f3cc4e79e35a0ea0101c888ae1b1 354 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 6 349 30.761 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 AMC99_02070 8995f3cc4e79e35a0ea0101c888ae1b1 354 SMART SM00448 6 128 2.6E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00422 b49349e9e7943c23df9fb21ec37510c5 444 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 140 3.4E-18 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00422 b49349e9e7943c23df9fb21ec37510c5 444 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 257 405 2.0E-36 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00422 b49349e9e7943c23df9fb21ec37510c5 444 SUPERFAMILY SSF56645 1 270 4.32E-64 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00422 b49349e9e7943c23df9fb21ec37510c5 444 Gene3D G3DSA:1.10.540.10 1 142 3.4E-51 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00422 b49349e9e7943c23df9fb21ec37510c5 444 Gene3D G3DSA:1.20.140.10 258 414 1.6E-39 T 11-10-2018 AMC99_00422 b49349e9e7943c23df9fb21ec37510c5 444 Gene3D G3DSA:2.40.110.10 143 257 3.9E-46 T 11-10-2018 AMC99_00422 b49349e9e7943c23df9fb21ec37510c5 444 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 144 240 3.7E-19 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00422 b49349e9e7943c23df9fb21ec37510c5 444 SUPERFAMILY SSF47203 255 412 6.93E-43 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00202 1f7e00989515ec83b0f00771f86403c5 502 SUPERFAMILY SSF48024 19 129 6.02E-24 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AMC99_00202 1f7e00989515ec83b0f00771f86403c5 502 Pfam PF03796 DnaB-like helicase C terminal domain 200 489 1.6E-103 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AMC99_00202 1f7e00989515ec83b0f00771f86403c5 502 Pfam PF00772 DnaB-like helicase N terminal domain 20 117 6.2E-21 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMC99_00202 1f7e00989515ec83b0f00771f86403c5 502 Gene3D G3DSA:1.10.860.10 12 178 2.8E-29 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMC99_00202 1f7e00989515ec83b0f00771f86403c5 502 Gene3D G3DSA:3.40.50.300 179 495 6.3E-100 T 11-10-2018 AMC99_00202 1f7e00989515ec83b0f00771f86403c5 502 SUPERFAMILY SSF52540 198 483 1.29E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00202 1f7e00989515ec83b0f00771f86403c5 502 SMART SM00382 215 425 4.7E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00202 1f7e00989515ec83b0f00771f86403c5 502 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 21 490 2.0E-148 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AMC99_01056 798a12181b9b510c3cb9f0aea6008673 92 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 21 81 16.031 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMC99_01056 798a12181b9b510c3cb9f0aea6008673 92 SUPERFAMILY SSF116842 15 80 8.63E-22 T 11-10-2018 AMC99_01056 798a12181b9b510c3cb9f0aea6008673 92 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 21 61 3.0E-11 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMC99_01056 798a12181b9b510c3cb9f0aea6008673 92 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 21 76 7.6E-25 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMC99_01056 798a12181b9b510c3cb9f0aea6008673 92 Gene3D G3DSA:1.10.287.1040 16 91 5.0E-23 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 AMC99_01056 798a12181b9b510c3cb9f0aea6008673 92 Pfam PF02609 Exonuclease VII small subunit 22 72 1.1E-21 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMC99_01707 a7ac404fecc75ad46c1ff6cbeec5161d 332 SMART SM00829 10 329 9.4E-46 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_01707 a7ac404fecc75ad46c1ff6cbeec5161d 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 1.7E-11 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_01707 a7ac404fecc75ad46c1ff6cbeec5161d 332 SUPERFAMILY SSF51735 115 293 1.24E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01707 a7ac404fecc75ad46c1ff6cbeec5161d 332 Gene3D G3DSA:3.90.180.10 8 327 4.3E-97 T 11-10-2018 AMC99_01707 a7ac404fecc75ad46c1ff6cbeec5161d 332 Gene3D G3DSA:3.40.50.720 120 299 4.3E-97 T 11-10-2018 AMC99_01707 a7ac404fecc75ad46c1ff6cbeec5161d 332 Pfam PF00107 Zinc-binding dehydrogenase 151 286 2.6E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_01707 a7ac404fecc75ad46c1ff6cbeec5161d 332 SUPERFAMILY SSF50129 1 139 3.65E-40 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_01281 1f46cb39c2ea90335914dc43abac1df9 142 Gene3D G3DSA:3.30.428.10 5 141 3.5E-24 T 11-10-2018 IPR036265 HIT-like superfamily AMC99_01281 1f46cb39c2ea90335914dc43abac1df9 142 Pfam PF01230 HIT domain 16 98 1.3E-4 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMC99_01281 1f46cb39c2ea90335914dc43abac1df9 142 SUPERFAMILY SSF54197 10 141 1.83E-23 T 11-10-2018 IPR036265 HIT-like superfamily AMC99_01581 98080c84c3e5091974f1aad79788a9f6 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 397 3.6E-117 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_01581 98080c84c3e5091974f1aad79788a9f6 401 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 19 397 49.335 T 11-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 AMC99_01581 98080c84c3e5091974f1aad79788a9f6 401 SUPERFAMILY SSF53383 42 398 5.5E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01581 98080c84c3e5091974f1aad79788a9f6 401 PIRSF PIRSF001434 4 400 3.1E-115 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_01581 98080c84c3e5091974f1aad79788a9f6 401 Gene3D G3DSA:3.40.640.10 16 266 2.4E-78 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_01581 98080c84c3e5091974f1aad79788a9f6 401 Gene3D G3DSA:3.90.1150.10 267 398 8.9E-38 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 185 2.8E-4 T 11-10-2018 AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 250 5.3E-53 T 11-10-2018 AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.4E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.4E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 3.4E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.4E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.4E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.4E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 Gene3D G3DSA:3.40.50.720 1 252 8.2E-77 T 11-10-2018 AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 5.2E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 5.2E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00970 e6a36a98bafd8c136aa1de51177f0b60 252 SUPERFAMILY SSF51735 3 251 3.1E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00747 385b70a3089a06c91e177963bc4eddce 122 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 20 112 3.5E-27 T 11-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMC99_00747 385b70a3089a06c91e177963bc4eddce 122 SMART SM00992 18 117 3.5E-55 T 11-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMC99_00747 385b70a3089a06c91e177963bc4eddce 122 Gene3D G3DSA:2.30.30.390 17 119 7.5E-33 T 11-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 AMC99_00747 385b70a3089a06c91e177963bc4eddce 122 SUPERFAMILY SSF141255 19 111 4.05E-35 T 11-10-2018 IPR036623 Hemimethylated DNA-binding domain superfamily GO:0003677 AMC99_00747 385b70a3089a06c91e177963bc4eddce 122 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 19 116 6.7E-38 T 11-10-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 AMC99_01066 47d0c2bf455e177a18d7d863c5740d53 320 Gene3D G3DSA:3.60.130.10 10 288 1.4E-42 T 11-10-2018 AMC99_01066 47d0c2bf455e177a18d7d863c5740d53 320 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 21 283 2.8E-37 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AMC99_01066 47d0c2bf455e177a18d7d863c5740d53 320 SUPERFAMILY SSF51197 18 283 2.84E-37 T 11-10-2018 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 Gene3D G3DSA:1.10.390.10 337 489 1.8E-30 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 Pfam PF01433 Peptidase family M1 domain 249 461 1.1E-40 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 SUPERFAMILY SSF63737 37 240 4.32E-36 T 11-10-2018 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 521 632 3.2E-22 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 Gene3D G3DSA:1.10.1740.60 240 336 6.1E-41 T 11-10-2018 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 SUPERFAMILY SSF48371 495 634 1.55E-30 T 11-10-2018 IPR016024 Armadillo-type fold AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 SUPERFAMILY SSF55486 246 485 1.17E-57 T 11-10-2018 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 223 238 1.4E-12 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 174 189 1.4E-12 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 324 339 1.4E-12 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 297 307 1.4E-12 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 343 355 1.4E-12 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 Gene3D G3DSA:2.60.40.1730 47 239 1.1E-51 T 11-10-2018 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 SMART SM01263 493 633 6.0E-33 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 AMC99_00453 45176d0a3e66cdd22940b2d79c750c7a 637 Gene3D G3DSA:1.25.40.320 493 634 7.7E-39 T 11-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily AMC99_00881 a6d4078e0919d62c4e8942368a7ba59c 255 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 33 222 3.3E-16 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 AMC99_00881 a6d4078e0919d62c4e8942368a7ba59c 255 Gene3D G3DSA:3.30.70.1020 113 183 2.4E-46 T 11-10-2018 AMC99_00881 a6d4078e0919d62c4e8942368a7ba59c 255 Gene3D G3DSA:3.40.50.1000 33 243 2.4E-46 T 11-10-2018 IPR023214 HAD superfamily AMC99_00881 a6d4078e0919d62c4e8942368a7ba59c 255 Pfam PF02358 Trehalose-phosphatase 34 245 2.0E-32 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AMC99_00881 a6d4078e0919d62c4e8942368a7ba59c 255 SUPERFAMILY SSF56784 32 254 8.1E-36 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_00881 a6d4078e0919d62c4e8942368a7ba59c 255 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 32 254 5.7E-37 T 11-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 Gene3D G3DSA:3.40.50.12160 11 128 3.4E-28 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 Pfam PF00919 Uncharacterized protein family UPF0004 12 103 1.3E-19 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 Gene3D G3DSA:3.80.30.20 143 390 1.9E-65 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 12 456 6.2E-165 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 Pfam PF04055 Radical SAM superfamily 151 334 4.8E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 Gene3D G3DSA:2.40.50.140 391 460 4.1E-14 T 11-10-2018 AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 11 458 58.638 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 12 456 9.2E-96 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 SUPERFAMILY SSF102114 141 380 5.23E-44 T 11-10-2018 AMC99_02030 76eed9678e0187dc4ac785ec0d6f336e 461 SMART SM00729 145 376 1.9E-48 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_00809 e995eaa0dfe6f70af398cd4f193375b5 120 Gene3D G3DSA:3.40.50.2300 2 120 3.3E-29 T 11-10-2018 AMC99_00809 e995eaa0dfe6f70af398cd4f193375b5 120 SUPERFAMILY SSF52172 1 115 2.85E-16 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_00809 e995eaa0dfe6f70af398cd4f193375b5 120 SMART SM00448 4 112 4.9E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00809 e995eaa0dfe6f70af398cd4f193375b5 120 Pfam PF00072 Response regulator receiver domain 6 112 1.1E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02707 09f90750ef1777330c8213a0bb842e01 440 ProSitePatterns PS01219 Ammonium transporters signature. 196 221 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AMC99_02707 09f90750ef1777330c8213a0bb842e01 440 Pfam PF00909 Ammonium Transporter Family 41 439 3.4E-118 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMC99_02707 09f90750ef1777330c8213a0bb842e01 440 SUPERFAMILY SSF111352 35 420 3.01E-126 T 11-10-2018 AMC99_02707 09f90750ef1777330c8213a0bb842e01 440 TIGRFAM TIGR00836 amt: ammonium transporter 39 439 2.1E-133 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMC99_02707 09f90750ef1777330c8213a0bb842e01 440 Gene3D G3DSA:1.10.3430.10 15 440 1.3E-138 T 11-10-2018 IPR029020 Ammonium/urea transporter AMC99_02707 09f90750ef1777330c8213a0bb842e01 440 PRINTS PR00342 Rhesus blood group protein signature 266 288 6.9E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AMC99_02707 09f90750ef1777330c8213a0bb842e01 440 PRINTS PR00342 Rhesus blood group protein signature 139 155 6.9E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AMC99_02707 09f90750ef1777330c8213a0bb842e01 440 PRINTS PR00342 Rhesus blood group protein signature 321 339 6.9E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AMC99_02707 09f90750ef1777330c8213a0bb842e01 440 PRINTS PR00342 Rhesus blood group protein signature 235 253 6.9E-7 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 AMC99_00245 ea614f13d42e875c8373d25a293a04a6 563 Pfam PF02441 Flavoprotein 6 177 4.2E-41 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AMC99_00245 ea614f13d42e875c8373d25a293a04a6 563 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 347 528 2.0E-71 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMC99_00245 ea614f13d42e875c8373d25a293a04a6 563 Gene3D G3DSA:3.40.50.1950 4 184 1.8E-53 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMC99_00245 ea614f13d42e875c8373d25a293a04a6 563 Gene3D G3DSA:3.40.50.10300 339 560 1.2E-74 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMC99_00245 ea614f13d42e875c8373d25a293a04a6 563 SUPERFAMILY SSF52507 5 179 7.33E-59 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AMC99_00245 ea614f13d42e875c8373d25a293a04a6 563 SUPERFAMILY SSF102645 345 557 6.02E-72 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AMC99_00725 c5df199833cf5ee7350908b67fa7abf8 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AMC99_00725 c5df199833cf5ee7350908b67fa7abf8 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 5.0E-13 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMC99_00725 c5df199833cf5ee7350908b67fa7abf8 78 SUPERFAMILY SSF47336 2 76 1.01E-23 T 11-10-2018 IPR036736 ACP-like superfamily AMC99_00725 c5df199833cf5ee7350908b67fa7abf8 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 77 4.8E-34 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMC99_00725 c5df199833cf5ee7350908b67fa7abf8 78 Gene3D G3DSA:1.10.1200.10 2 78 1.0E-29 T 11-10-2018 IPR036736 ACP-like superfamily AMC99_00725 c5df199833cf5ee7350908b67fa7abf8 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.5E-14 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMC99_00725 c5df199833cf5ee7350908b67fa7abf8 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.948 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AMC99_02446 6add5759ba8ee76f634e91218c5eb3f1 220 PIRSF PIRSF001461 1 219 6.2E-93 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMC99_02446 6add5759ba8ee76f634e91218c5eb3f1 220 SUPERFAMILY SSF51366 3 216 4.0E-78 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMC99_02446 6add5759ba8ee76f634e91218c5eb3f1 220 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMC99_02446 6add5759ba8ee76f634e91218c5eb3f1 220 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 202 5.3E-85 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMC99_02446 6add5759ba8ee76f634e91218c5eb3f1 220 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 4.6E-91 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMC99_02446 6add5759ba8ee76f634e91218c5eb3f1 220 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AMC99_02446 6add5759ba8ee76f634e91218c5eb3f1 220 Gene3D G3DSA:3.20.20.70 1 219 1.0E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02195 a5e245b254da142326dbd62486fedfcd 69 Gene3D G3DSA:1.20.5.1030 9 65 8.0E-17 T 11-10-2018 IPR038379 SecE superfamily AMC99_02195 a5e245b254da142326dbd62486fedfcd 69 Hamap MF_00422 Protein translocase subunit SecE [secE]. 9 64 12.654 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMC99_02195 a5e245b254da142326dbd62486fedfcd 69 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 13 65 3.5E-19 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMC99_02195 a5e245b254da142326dbd62486fedfcd 69 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 13 66 7.8E-19 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMC99_02195 a5e245b254da142326dbd62486fedfcd 69 PRINTS PR01650 Bacterial translocase SecE signature 52 68 4.4E-6 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMC99_02195 a5e245b254da142326dbd62486fedfcd 69 PRINTS PR01650 Bacterial translocase SecE signature 8 28 4.4E-6 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMC99_02195 a5e245b254da142326dbd62486fedfcd 69 PRINTS PR01650 Bacterial translocase SecE signature 32 52 4.4E-6 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AMC99_01776 2d88438caeeba31d52548230bf077085 534 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 9 528 1.7E-212 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMC99_01776 2d88438caeeba31d52548230bf077085 534 Gene3D G3DSA:3.40.449.10 29 214 8.9E-223 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMC99_01776 2d88438caeeba31d52548230bf077085 534 Gene3D G3DSA:2.170.8.10 39 332 8.9E-223 T 11-10-2018 AMC99_01776 2d88438caeeba31d52548230bf077085 534 Gene3D G3DSA:3.90.228.20 215 515 8.9E-223 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMC99_01776 2d88438caeeba31d52548230bf077085 534 Pfam PF01293 Phosphoenolpyruvate carboxykinase 19 482 3.4E-217 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMC99_01776 2d88438caeeba31d52548230bf077085 534 SUPERFAMILY SSF68923 7 213 1.31E-78 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 AMC99_01776 2d88438caeeba31d52548230bf077085 534 SUPERFAMILY SSF53795 214 528 1.98E-134 T 11-10-2018 AMC99_01776 2d88438caeeba31d52548230bf077085 534 PIRSF PIRSF006294 3 530 7.0E-232 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMC99_01776 2d88438caeeba31d52548230bf077085 534 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 13 530 54.587 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 AMC99_00498 bad0e3817efdc6f5c9a1f3c01f79addd 312 SUPERFAMILY SSF53850 127 237 3.5E-5 T 11-10-2018 AMC99_00498 bad0e3817efdc6f5c9a1f3c01f79addd 312 Gene3D G3DSA:3.40.190.170 13 310 5.8E-98 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily AMC99_00498 bad0e3817efdc6f5c9a1f3c01f79addd 312 PIRSF PIRSF006470 9 310 1.3E-83 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AMC99_00498 bad0e3817efdc6f5c9a1f3c01f79addd 312 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 22 257 9.7E-59 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 AMC99_00498 bad0e3817efdc6f5c9a1f3c01f79addd 312 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 19 293 1.1E-77 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 AMC99_00369 b23f43baf0040feae062e26db44aa4dc 161 PRINTS PR00502 NUDIX hydrolase family signature 58 72 4.1E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMC99_00369 b23f43baf0040feae062e26db44aa4dc 161 PRINTS PR00502 NUDIX hydrolase family signature 72 87 4.1E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMC99_00369 b23f43baf0040feae062e26db44aa4dc 161 SUPERFAMILY SSF55811 26 156 2.17E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMC99_00369 b23f43baf0040feae062e26db44aa4dc 161 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMC99_00369 b23f43baf0040feae062e26db44aa4dc 161 Gene3D G3DSA:3.90.79.10 17 157 1.2E-25 T 11-10-2018 AMC99_00369 b23f43baf0040feae062e26db44aa4dc 161 Pfam PF00293 NUDIX domain 34 139 9.5E-21 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_02744 64b0cd8ee47f1422c487b8536a7ec0fc 152 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMC99_02744 64b0cd8ee47f1422c487b8536a7ec0fc 152 Gene3D G3DSA:1.20.120.910 12 151 7.1E-35 T 11-10-2018 AMC99_02744 64b0cd8ee47f1422c487b8536a7ec0fc 152 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 26.348 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMC99_02744 64b0cd8ee47f1422c487b8536a7ec0fc 152 SUPERFAMILY SSF57716 111 148 3.71E-8 T 11-10-2018 AMC99_02744 64b0cd8ee47f1422c487b8536a7ec0fc 152 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 6.8E-42 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 AMC99_02744 64b0cd8ee47f1422c487b8536a7ec0fc 152 SUPERFAMILY SSF109635 17 110 9.02E-32 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily AMC99_02744 64b0cd8ee47f1422c487b8536a7ec0fc 152 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 144 3.7E-9 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMC99_01526 81e10e706c4b161baa90960d9b74006b 174 SUPERFAMILY SSF52080 4 150 1.57E-42 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AMC99_01526 81e10e706c4b161baa90960d9b74006b 174 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 149 1.3E-43 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01526 81e10e706c4b161baa90960d9b74006b 174 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 151 20.547 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AMC99_01526 81e10e706c4b161baa90960d9b74006b 174 Gene3D G3DSA:3.100.10.10 66 152 6.5E-17 T 11-10-2018 AMC99_01526 81e10e706c4b161baa90960d9b74006b 174 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 149 1.8E-34 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P AMC99_02737 7a7b471763fcdba3dd9c507914f60133 123 SMART SM00448 3 116 7.2E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02737 7a7b471763fcdba3dd9c507914f60133 123 Pfam PF00072 Response regulator receiver domain 5 116 4.0E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02737 7a7b471763fcdba3dd9c507914f60133 123 Gene3D G3DSA:3.40.50.12740 2 122 1.7E-38 T 11-10-2018 AMC99_02737 7a7b471763fcdba3dd9c507914f60133 123 SUPERFAMILY SSF52172 3 120 1.31E-34 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 Pfam PF01019 Gamma-glutamyltranspeptidase 61 573 2.3E-138 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 SUPERFAMILY SSF56235 42 573 2.12E-149 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 Gene3D G3DSA:3.60.20.40 395 579 2.2E-43 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 160 1.0E-61 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 262 278 1.0E-61 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 473 1.0E-61 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 160 179 1.0E-61 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 483 500 1.0E-61 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 292 311 1.0E-61 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 68 93 1.0E-61 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 400 418 1.0E-61 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 422 440 1.0E-61 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 Gene3D G3DSA:1.10.246.130 279 394 4.2E-39 T 11-10-2018 AMC99_02505 5de5fc2f58a0d657826d9d856836f6f6 581 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 48 573 3.5E-115 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 AMC99_00936 b707caca1ff9bb1fd699816b868c8e50 492 Pfam PF01476 LysM domain 442 487 8.2E-5 T 11-10-2018 IPR018392 LysM domain AMC99_00936 b707caca1ff9bb1fd699816b868c8e50 492 Gene3D G3DSA:3.10.350.10 430 492 2.9E-5 T 11-10-2018 IPR036779 LysM domain superfamily AMC99_00936 b707caca1ff9bb1fd699816b868c8e50 492 Pfam PF01435 Peptidase family M48 63 256 5.2E-37 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMC99_00936 b707caca1ff9bb1fd699816b868c8e50 492 Gene3D G3DSA:3.30.2010.10 59 142 4.8E-5 T 11-10-2018 AMC99_02227 18de6c561f18ccacf75cd1f7d03547a4 283 Pfam PF00795 Carbon-nitrogen hydrolase 5 261 3.2E-54 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMC99_02227 18de6c561f18ccacf75cd1f7d03547a4 283 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 279 2.4E-133 T 11-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 AMC99_02227 18de6c561f18ccacf75cd1f7d03547a4 283 Gene3D G3DSA:3.60.110.10 1 282 2.9E-103 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_02227 18de6c561f18ccacf75cd1f7d03547a4 283 SUPERFAMILY SSF56317 1 279 7.98E-82 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_01397 909e0e3a77eaa271ef6b58d6f0889b2e 301 Gene3D G3DSA:3.30.1490.20 115 181 8.2E-24 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AMC99_01397 909e0e3a77eaa271ef6b58d6f0889b2e 301 Gene3D G3DSA:3.30.470.80 182 299 5.3E-41 T 11-10-2018 AMC99_01397 909e0e3a77eaa271ef6b58d6f0889b2e 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 49.266 T 11-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK AMC99_01397 909e0e3a77eaa271ef6b58d6f0889b2e 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 1.3E-63 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 AMC99_01397 909e0e3a77eaa271ef6b58d6f0889b2e 301 SUPERFAMILY SSF56059 98 287 4.65E-49 T 11-10-2018 AMC99_01397 909e0e3a77eaa271ef6b58d6f0889b2e 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 5.0E-81 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 AMC99_01397 909e0e3a77eaa271ef6b58d6f0889b2e 301 Gene3D G3DSA:3.40.50.20 1 114 2.9E-36 T 11-10-2018 AMC99_02080 8641e610686d30bb27d49656c48a0960 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 AMC99_02080 8641e610686d30bb27d49656c48a0960 324 Gene3D G3DSA:3.90.180.10 8 320 1.3E-90 T 11-10-2018 AMC99_02080 8641e610686d30bb27d49656c48a0960 324 Gene3D G3DSA:3.40.50.720 120 292 1.3E-90 T 11-10-2018 AMC99_02080 8641e610686d30bb27d49656c48a0960 324 SMART SM00829 10 322 1.1E-44 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_02080 8641e610686d30bb27d49656c48a0960 324 Pfam PF00107 Zinc-binding dehydrogenase 151 265 1.3E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_02080 8641e610686d30bb27d49656c48a0960 324 SUPERFAMILY SSF50129 1 140 5.48E-35 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_02080 8641e610686d30bb27d49656c48a0960 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 2.6E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_02080 8641e610686d30bb27d49656c48a0960 324 SUPERFAMILY SSF51735 112 273 2.59E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00123 9a84d9eaaaa63417e7cad78c4a63e94f 205 Pfam PF00484 Carbonic anhydrase 50 198 4.8E-36 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_00123 9a84d9eaaaa63417e7cad78c4a63e94f 205 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 91 111 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_00123 9a84d9eaaaa63417e7cad78c4a63e94f 205 SUPERFAMILY SSF53056 3 202 3.53E-50 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMC99_00123 9a84d9eaaaa63417e7cad78c4a63e94f 205 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 54 61 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_00123 9a84d9eaaaa63417e7cad78c4a63e94f 205 Gene3D G3DSA:3.40.1050.10 1 205 1.1E-61 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 AMC99_00123 9a84d9eaaaa63417e7cad78c4a63e94f 205 SMART SM00947 42 202 3.9E-49 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMC99_01841 e5e0bd381fbfee0cd2a3afc595ba652c 256 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 5 237 6.2E-84 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMC99_01841 e5e0bd381fbfee0cd2a3afc595ba652c 256 Gene3D G3DSA:3.40.1010.10 3 120 1.9E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMC99_01841 e5e0bd381fbfee0cd2a3afc595ba652c 256 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 10 24 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMC99_01841 e5e0bd381fbfee0cd2a3afc595ba652c 256 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 85 118 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMC99_01841 e5e0bd381fbfee0cd2a3afc595ba652c 256 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 214 8.9E-52 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 AMC99_01841 e5e0bd381fbfee0cd2a3afc595ba652c 256 Gene3D G3DSA:3.30.950.10 121 247 4.3E-38 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 AMC99_01841 e5e0bd381fbfee0cd2a3afc595ba652c 256 SUPERFAMILY SSF53790 4 238 6.54E-72 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMC99_01570 3282e184299605cf3c4f8f8e9e1beaca 333 Pfam PF00482 Type II secretion system (T2SS), protein F 166 290 6.4E-21 T 11-10-2018 IPR018076 Type II secretion system F domain AMC99_01570 3282e184299605cf3c4f8f8e9e1beaca 333 Gene3D G3DSA:1.20.81.30 153 268 2.1E-8 T 11-10-2018 AMC99_00793 7ebe39513e935ea2416668d90756529a 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 113 358 3.1E-95 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMC99_00793 7ebe39513e935ea2416668d90756529a 364 SUPERFAMILY SSF52540 101 343 4.23E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00793 7ebe39513e935ea2416668d90756529a 364 Pfam PF01883 Iron-sulfur cluster assembly protein 8 76 7.3E-12 T 11-10-2018 IPR002744 MIP18 family-like AMC99_00793 7ebe39513e935ea2416668d90756529a 364 Gene3D G3DSA:3.40.50.300 106 353 2.3E-83 T 11-10-2018 AMC99_00793 7ebe39513e935ea2416668d90756529a 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 108 359 36.163 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AMC99_00793 7ebe39513e935ea2416668d90756529a 364 SUPERFAMILY SSF117916 4 88 1.28E-13 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMC99_00793 7ebe39513e935ea2416668d90756529a 364 Gene3D G3DSA:3.30.300.130 2 93 1.5E-7 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMC99_01419 37ce9c902dca605a28db56caa96731a2 437 ProSitePatterns PS00885 EPSP synthase signature 2. 344 362 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMC99_01419 37ce9c902dca605a28db56caa96731a2 437 Gene3D G3DSA:3.65.10.10 12 432 4.0E-152 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMC99_01419 37ce9c902dca605a28db56caa96731a2 437 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 431 3.5E-112 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AMC99_01419 37ce9c902dca605a28db56caa96731a2 437 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 434 6.5E-129 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMC99_01419 37ce9c902dca605a28db56caa96731a2 437 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMC99_01419 37ce9c902dca605a28db56caa96731a2 437 Gene3D G3DSA:3.65.10.10 22 234 4.0E-152 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMC99_01419 37ce9c902dca605a28db56caa96731a2 437 PIRSF PIRSF000505 6 437 9.4E-120 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMC99_01419 37ce9c902dca605a28db56caa96731a2 437 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 437 31.925 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 AMC99_01419 37ce9c902dca605a28db56caa96731a2 437 SUPERFAMILY SSF55205 7 434 1.96E-127 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMC99_01367 a4117df61af08bcf228423f7694309c1 65 Pfam PF04964 Flp/Fap pilin component 10 53 1.4E-15 T 11-10-2018 IPR007047 Flp/Fap pilin component AMC99_01441 b2ab44df8793fd836b99cf13fde98b29 404 SUPERFAMILY SSF53686 12 398 1.06E-148 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_01441 b2ab44df8793fd836b99cf13fde98b29 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 62 387 1.2E-46 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMC99_01441 b2ab44df8793fd836b99cf13fde98b29 404 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 16 399 5.7E-190 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMC99_01441 b2ab44df8793fd836b99cf13fde98b29 404 Gene3D G3DSA:3.40.50.1100 63 393 2.0E-185 T 11-10-2018 AMC99_01441 b2ab44df8793fd836b99cf13fde98b29 404 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 400 51.926 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMC99_01441 b2ab44df8793fd836b99cf13fde98b29 404 PIRSF PIRSF001413 2 404 1.4E-158 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMC99_01441 b2ab44df8793fd836b99cf13fde98b29 404 Gene3D G3DSA:3.40.50.1100 19 215 2.0E-185 T 11-10-2018 AMC99_01441 b2ab44df8793fd836b99cf13fde98b29 404 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 90 104 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 AMC99_00956 ae3660031a437ccaf947b8cacd7482fb 150 Gene3D G3DSA:3.30.1150.10 2 72 8.9E-10 T 11-10-2018 AMC99_00956 ae3660031a437ccaf947b8cacd7482fb 150 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 3 54 4.0E-7 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AMC99_00956 ae3660031a437ccaf947b8cacd7482fb 150 SUPERFAMILY SSF74653 3 70 7.32E-10 T 11-10-2018 AMC99_00956 ae3660031a437ccaf947b8cacd7482fb 150 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 3 69 1.3E-10 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMC99_02683 fd002075611f83787ef675c7d84fa018 220 Gene3D G3DSA:3.30.1150.10 50 220 2.7E-19 T 11-10-2018 AMC99_02683 fd002075611f83787ef675c7d84fa018 220 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 141 219 5.1E-19 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMC99_02683 fd002075611f83787ef675c7d84fa018 220 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 142 219 2.1E-15 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AMC99_02683 fd002075611f83787ef675c7d84fa018 220 SUPERFAMILY SSF74653 136 200 1.83E-15 T 11-10-2018 AMC99_02325 65aef3a55677f575a4da0cb6a92d0131 566 SUPERFAMILY SSF56801 39 561 7.59E-129 T 11-10-2018 AMC99_02325 65aef3a55677f575a4da0cb6a92d0131 566 Gene3D G3DSA:3.30.300.310 458 562 1.7E-22 T 11-10-2018 AMC99_02325 65aef3a55677f575a4da0cb6a92d0131 566 Pfam PF00501 AMP-binding enzyme 50 462 3.5E-85 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_02325 65aef3a55677f575a4da0cb6a92d0131 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 542 5.8E-11 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_02325 65aef3a55677f575a4da0cb6a92d0131 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 200 211 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_02325 65aef3a55677f575a4da0cb6a92d0131 566 Gene3D G3DSA:3.40.50.12780 33 455 4.2E-99 T 11-10-2018 AMC99_01711 458323c914cc28dab989d7aeacbd2983 260 Gene3D G3DSA:3.90.79.10 10 230 6.7E-45 T 11-10-2018 AMC99_01711 458323c914cc28dab989d7aeacbd2983 260 SUPERFAMILY SSF55811 9 198 3.83E-16 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMC99_01711 458323c914cc28dab989d7aeacbd2983 260 Pfam PF00293 NUDIX domain 14 92 1.8E-6 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_01023 8ef89c0f84084f62e6cb20c828c30ce1 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_01023 8ef89c0f84084f62e6cb20c828c30ce1 262 Gene3D G3DSA:3.40.50.300 15 260 6.6E-64 T 11-10-2018 AMC99_01023 8ef89c0f84084f62e6cb20c828c30ce1 262 SUPERFAMILY SSF52540 16 248 3.63E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01023 8ef89c0f84084f62e6cb20c828c30ce1 262 Pfam PF00005 ABC transporter 31 186 7.9E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_01023 8ef89c0f84084f62e6cb20c828c30ce1 262 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 15 262 1.1E-120 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AMC99_01023 8ef89c0f84084f62e6cb20c828c30ce1 262 SMART SM00382 39 233 4.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00872 5a735ef7c03adbf3ec068be5d56d29ed 365 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 9 339 1.7E-131 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_00872 5a735ef7c03adbf3ec068be5d56d29ed 365 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 166 5.4E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AMC99_00872 5a735ef7c03adbf3ec068be5d56d29ed 365 SUPERFAMILY SSF55326 8 170 6.73E-48 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMC99_00872 5a735ef7c03adbf3ec068be5d56d29ed 365 SUPERFAMILY SSF56042 173 345 6.8E-57 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMC99_00872 5a735ef7c03adbf3ec068be5d56d29ed 365 Gene3D G3DSA:3.90.650.10 173 350 3.0E-65 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AMC99_00872 5a735ef7c03adbf3ec068be5d56d29ed 365 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 349 44.151 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AMC99_00872 5a735ef7c03adbf3ec068be5d56d29ed 365 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 342 2.6E-35 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AMC99_00872 5a735ef7c03adbf3ec068be5d56d29ed 365 Gene3D G3DSA:3.30.1330.10 7 171 3.8E-67 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.9E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.9E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.9E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.9E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.9E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.9E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 SUPERFAMILY SSF51735 7 259 8.55E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.6E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.6E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.6E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 258 1.3E-65 T 11-10-2018 AMC99_00847 5a99cbdd0b72ef4118517c294b4aa181 260 Gene3D G3DSA:3.40.50.720 1 260 4.7E-84 T 11-10-2018 AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 Pfam PF00717 Peptidase S24-like 40 127 1.4E-17 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 21 251 1.3E-37 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 Gene3D G3DSA:2.170.230.10 115 203 9.5E-46 T 11-10-2018 AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 ProSitePatterns PS00501 Signal peptidases I serine active site. 43 50 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 SUPERFAMILY SSF51306 33 273 8.72E-58 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 Gene3D G3DSA:2.10.109.10 33 250 9.5E-46 T 11-10-2018 AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 ProSitePatterns PS00760 Signal peptidases I lysine active site. 106 118 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 34 50 1.0E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 1.0E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_00560 d5c0115d98ab6a4c917b01947760b3e6 289 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 104 116 1.0E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_02436 bb1c86398062e4066f795e13b39d4a46 429 SUPERFAMILY SSF51338 21 412 1.01E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_02436 bb1c86398062e4066f795e13b39d4a46 429 Gene3D G3DSA:3.20.20.140 80 366 1.1E-70 T 11-10-2018 AMC99_02436 bb1c86398062e4066f795e13b39d4a46 429 Gene3D G3DSA:2.30.40.10 30 399 1.1E-70 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_02436 bb1c86398062e4066f795e13b39d4a46 429 SUPERFAMILY SSF51556 107 366 4.76E-9 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_02436 bb1c86398062e4066f795e13b39d4a46 429 Pfam PF07969 Amidohydrolase family 297 400 1.1E-12 T 11-10-2018 IPR013108 Amidohydrolase 3 AMC99_02467 b6356855dd3c616cc6160dd49ab0e3ca 306 Pfam PF00135 Carboxylesterase family 69 168 2.7E-21 T 11-10-2018 IPR002018 Carboxylesterase, type B AMC99_02467 b6356855dd3c616cc6160dd49ab0e3ca 306 Gene3D G3DSA:3.40.50.1820 30 288 1.3E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02467 b6356855dd3c616cc6160dd49ab0e3ca 306 SUPERFAMILY SSF53474 43 269 8.86E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01462 345c00d0c4ad176056db6d5ab96a77df 490 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 5 484 2.3E-186 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 AMC99_01462 345c00d0c4ad176056db6d5ab96a77df 490 Pfam PF00474 Sodium:solute symporter family 34 438 3.0E-94 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMC99_01462 345c00d0c4ad176056db6d5ab96a77df 490 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 438 3.5E-85 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 AMC99_01462 345c00d0c4ad176056db6d5ab96a77df 490 Gene3D G3DSA:1.20.1730.10 5 488 3.4E-86 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily AMC99_01462 345c00d0c4ad176056db6d5ab96a77df 490 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 420 440 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 Gene3D G3DSA:2.40.50.140 1 94 3.6E-35 T 11-10-2018 AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 78 24.814 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 73 3.0E-22 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 Pfam PF00366 Ribosomal protein S17 8 73 9.1E-32 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 7.8E-36 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 SUPERFAMILY SSF50249 3 86 4.71E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 1.1E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 1.1E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 1.1E-13 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01537 0f666284ddc9d47ba417316e871468d1 96 ProSitePatterns PS00056 Ribosomal protein S17 signature. 54 66 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_02815 63a17c2bf90273e4c964b344fbe6afc2 104 SUPERFAMILY SSF158757 11 80 1.44E-28 T 11-10-2018 IPR036810 SMc04008-like superfamily AMC99_02815 63a17c2bf90273e4c964b344fbe6afc2 104 Pfam PF06844 Protein of unknown function (DUF1244) 34 96 9.2E-28 T 11-10-2018 IPR023163 SMc04008-like domain AMC99_02815 63a17c2bf90273e4c964b344fbe6afc2 104 Gene3D G3DSA:1.10.3340.10 4 103 1.6E-34 T 11-10-2018 IPR036810 SMc04008-like superfamily AMC99_00473 7ce75ac0dea96e2b1b0ff1b603ff579e 977 Pfam PF00593 TonB dependent receptor 373 975 4.9E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_00473 7ce75ac0dea96e2b1b0ff1b603ff579e 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 169 5.9E-25 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_00473 7ce75ac0dea96e2b1b0ff1b603ff579e 977 Gene3D G3DSA:2.170.130.10 36 174 4.2E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_00473 7ce75ac0dea96e2b1b0ff1b603ff579e 977 SUPERFAMILY SSF56935 41 977 3.36E-97 T 11-10-2018 AMC99_00991 59d45f6f103fc650938b6ca8b0a806e2 228 SUPERFAMILY SSF51261 64 226 1.67E-32 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_00991 59d45f6f103fc650938b6ca8b0a806e2 228 Gene3D G3DSA:2.70.70.10 65 228 7.9E-46 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_00991 59d45f6f103fc650938b6ca8b0a806e2 228 Pfam PF01551 Peptidase family M23 114 206 4.2E-23 T 11-10-2018 IPR016047 Peptidase M23 AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 SMART SM00936 287 377 3.4E-21 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 1.5E-11 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 1.5E-11 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 1.5E-11 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 SUPERFAMILY SSF56601 41 285 3.41E-61 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 SUPERFAMILY SSF69189 287 379 2.16E-17 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 40 266 1.8E-54 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 Gene3D G3DSA:3.40.710.10 29 285 4.7E-71 T 11-10-2018 AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 287 376 3.0E-13 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMC99_01178 4325f25cf8f9612cba02eecbc8936df2 393 Gene3D G3DSA:2.60.410.10 287 377 1.5E-17 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMC99_01996 be5da71e253c2e50f2a23677b77a16ba 65 SUPERFAMILY SSF88713 12 61 1.67E-9 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_01996 be5da71e253c2e50f2a23677b77a16ba 65 Gene3D G3DSA:3.20.20.370 3 65 4.3E-11 T 11-10-2018 AMC99_00134 1463f5f6be00d693ba9e1026bba7df87 338 SMART SM00729 25 229 6.7E-11 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_00134 1463f5f6be00d693ba9e1026bba7df87 338 SUPERFAMILY SSF102114 17 293 7.85E-72 T 11-10-2018 AMC99_00134 1463f5f6be00d693ba9e1026bba7df87 338 Gene3D G3DSA:3.20.20.70 13 338 3.7E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00134 1463f5f6be00d693ba9e1026bba7df87 338 Pfam PF04055 Radical SAM superfamily 31 191 7.3E-31 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_00134 1463f5f6be00d693ba9e1026bba7df87 338 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 16 338 37.259 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00134 1463f5f6be00d693ba9e1026bba7df87 338 Pfam PF06463 Molybdenum Cofactor Synthesis C 197 321 7.3E-33 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00134 1463f5f6be00d693ba9e1026bba7df87 338 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 16 338 4.3E-102 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00134 1463f5f6be00d693ba9e1026bba7df87 338 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 31 42 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_01502 cce4b2ad4758965b4d9ca7a45a4c5348 352 Gene3D G3DSA:1.10.10.2520 128 215 1.2E-22 T 11-10-2018 AMC99_01502 cce4b2ad4758965b4d9ca7a45a4c5348 352 Pfam PF07486 Cell Wall Hydrolase 144 252 1.1E-26 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 AMC99_00680 bcc2c8d524ac6f9f9f34940da0fa6406 368 Pfam PF14378 PAP2 superfamily 138 338 3.2E-23 T 11-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AMC99_01463 e75ff2bbb74dccd5f6fd23d77a884b2d 586 Pfam PF02254 TrkA-N domain 415 527 7.0E-22 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMC99_01463 e75ff2bbb74dccd5f6fd23d77a884b2d 586 SUPERFAMILY SSF51735 413 542 2.3E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01463 e75ff2bbb74dccd5f6fd23d77a884b2d 586 Gene3D G3DSA:1.20.1530.20 8 399 2.4E-63 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMC99_01463 e75ff2bbb74dccd5f6fd23d77a884b2d 586 Gene3D G3DSA:3.40.50.720 411 570 1.5E-35 T 11-10-2018 AMC99_01463 e75ff2bbb74dccd5f6fd23d77a884b2d 586 Pfam PF00999 Sodium/hydrogen exchanger family 17 386 2.2E-48 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMC99_01969 9a000bd18f30ede75ee4c6a6ac59780f 198 SUPERFAMILY SSF159594 43 197 6.8E-24 T 11-10-2018 AMC99_01969 9a000bd18f30ede75ee4c6a6ac59780f 198 Gene3D G3DSA:3.40.50.10610 22 198 4.7E-24 T 11-10-2018 AMC99_01969 9a000bd18f30ede75ee4c6a6ac59780f 198 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 191 5.5E-12 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component AMC99_00969 c1371d434f9ca3da2280e3e3641a48c0 71 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 19 34 - T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AMC99_00969 c1371d434f9ca3da2280e3e3641a48c0 71 Pfam PF01679 Proteolipid membrane potential modulator 15 60 1.2E-17 T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 AMC99_02351 eea033d76c790497278d9b1fa35b42a2 166 Gene3D G3DSA:3.40.630.30 1 166 4.2E-47 T 11-10-2018 AMC99_02351 eea033d76c790497278d9b1fa35b42a2 166 SUPERFAMILY SSF55729 5 139 1.68E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02351 eea033d76c790497278d9b1fa35b42a2 166 Pfam PF13527 Acetyltransferase (GNAT) domain 7 130 1.7E-8 T 11-10-2018 AMC99_02623 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 Gene3D G3DSA:1.20.1510.10 12 211 2.2E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMC99_02623 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 Pfam PF01545 Cation efflux family 18 211 5.5E-30 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_02623 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 292 5.2E-60 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_02623 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 SUPERFAMILY SSF160240 215 293 7.19E-22 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMC99_02623 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 SUPERFAMILY SSF161111 11 212 2.22E-45 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMC99_02623 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 Pfam PF16916 Dimerisation domain of Zinc Transporter 216 292 4.1E-23 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain AMC99_02623 a4ac22b0f3b92d39ea4b0ff1e7b479d5 311 Gene3D G3DSA:3.30.70.1350 212 294 4.7E-26 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMC99_01026 b67e786c947dcbb3d38c84abb9963b4c 353 Gene3D G3DSA:3.40.190.10 123 288 4.8E-53 T 11-10-2018 AMC99_01026 b67e786c947dcbb3d38c84abb9963b4c 353 Pfam PF12849 PBP superfamily domain 31 308 1.0E-39 T 11-10-2018 IPR024370 PBP domain AMC99_01026 b67e786c947dcbb3d38c84abb9963b4c 353 SUPERFAMILY SSF53850 36 342 7.06E-64 T 11-10-2018 AMC99_01026 b67e786c947dcbb3d38c84abb9963b4c 353 Gene3D G3DSA:3.40.190.10 38 308 4.8E-53 T 11-10-2018 AMC99_00753 2d82373e7bece809fa30432b280946fd 282 Gene3D G3DSA:3.40.50.720 2 277 6.1E-71 T 11-10-2018 AMC99_00753 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00753 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00753 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00753 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00753 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00753 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.2E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00753 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 9.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00753 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 9.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00753 2d82373e7bece809fa30432b280946fd 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 9.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00753 2d82373e7bece809fa30432b280946fd 282 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 247 1.9E-59 T 11-10-2018 AMC99_00753 2d82373e7bece809fa30432b280946fd 282 SUPERFAMILY SSF51735 3 249 8.83E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 SMART SM00358 156 223 1.9E-19 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 11 219 24.692 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 ProSitePatterns PS00517 Ribonuclease III family signature. 41 49 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 Pfam PF14622 Ribonuclease-III-like 22 145 2.4E-30 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 SMART SM00535 23 151 7.4E-36 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 SUPERFAMILY SSF69065 6 154 2.09E-38 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 13 221 6.4E-63 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 Gene3D G3DSA:1.10.1520.10 11 148 1.0E-35 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 Gene3D G3DSA:3.30.160.20 151 223 8.9E-21 T 11-10-2018 AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 Pfam PF00035 Double-stranded RNA binding motif 156 221 9.9E-13 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AMC99_00910 b3898b231f78482ef8fe0a03af860c71 223 SUPERFAMILY SSF54768 111 222 1.73E-23 T 11-10-2018 AMC99_01584 f53f94a66e7f814f0d75f6977cdfb833 356 Gene3D G3DSA:3.40.718.10 1 352 8.4E-139 T 11-10-2018 AMC99_01584 f53f94a66e7f814f0d75f6977cdfb833 356 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AMC99_01584 f53f94a66e7f814f0d75f6977cdfb833 356 SMART SM01329 2 348 2.8E-180 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMC99_01584 f53f94a66e7f814f0d75f6977cdfb833 356 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 352 46.307 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AMC99_01584 f53f94a66e7f814f0d75f6977cdfb833 356 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 350 2.4E-132 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 AMC99_01584 f53f94a66e7f814f0d75f6977cdfb833 356 SUPERFAMILY SSF53659 2 352 5.76E-113 T 11-10-2018 AMC99_01584 f53f94a66e7f814f0d75f6977cdfb833 356 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 348 1.7E-120 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AMC99_01280 94c284b912d218109cb7b0b7992621d8 378 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 221 243 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_01280 94c284b912d218109cb7b0b7992621d8 378 Gene3D G3DSA:1.20.120.1760 153 358 3.9E-22 T 11-10-2018 AMC99_01280 94c284b912d218109cb7b0b7992621d8 378 Pfam PF01066 CDP-alcohol phosphatidyltransferase 179 243 1.0E-11 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_01744 cce3a20ce02cb1073aaebbad23f6c72c 336 TIGRFAM TIGR03806 chp_HNE_0200: conserved hypothetical protein, HNE_0200 family 39 334 2.0E-109 T 11-10-2018 IPR022269 Conserved hypothetical protein CHP03806, HNE0200 family AMC99_00901 5003a69e53332d19b5e8f037c5ea8670 202 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 200 1.9E-49 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMC99_00901 5003a69e53332d19b5e8f037c5ea8670 202 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 190 8.4E-47 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMC99_00901 5003a69e53332d19b5e8f037c5ea8670 202 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 199 19.515 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMC99_00901 5003a69e53332d19b5e8f037c5ea8670 202 SMART SM01207 8 191 7.5E-77 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AMC99_02588 0c7c41353a5beceeeb48370c19489d67 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 213 19.53 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AMC99_02588 0c7c41353a5beceeeb48370c19489d67 213 Pfam PF01467 Cytidylyltransferase-like 5 184 2.5E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_02588 0c7c41353a5beceeeb48370c19489d67 213 SUPERFAMILY SSF52374 1 185 2.0E-36 T 11-10-2018 AMC99_02588 0c7c41353a5beceeeb48370c19489d67 213 Gene3D G3DSA:3.40.50.620 1 210 3.8E-36 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_00407 bc8ae09e29a7305761a244e100f2bc1e 141 SUPERFAMILY SSF81324 29 136 1.83E-9 T 11-10-2018 AMC99_00407 bc8ae09e29a7305761a244e100f2bc1e 141 Pfam PF07885 Ion channel 71 135 9.9E-8 T 11-10-2018 IPR013099 Potassium channel domain AMC99_00407 bc8ae09e29a7305761a244e100f2bc1e 141 Gene3D G3DSA:1.10.287.70 39 138 2.0E-6 T 11-10-2018 AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 77 272 1.0E-43 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 Pfam PF00145 C-5 cytosine-specific DNA methylase 327 396 6.4E-14 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 Pfam PF00145 C-5 cytosine-specific DNA methylase 77 268 1.4E-42 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 378 396 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 Gene3D G3DSA:3.40.50.150 67 282 2.9E-50 T 11-10-2018 AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 SUPERFAMILY SSF53335 76 398 3.14E-73 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 Gene3D G3DSA:3.90.120.10 290 389 5.8E-22 T 11-10-2018 AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 248 261 1.0E-16 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 75 91 1.0E-16 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_01821 080a2886a850a3952f8b7e98dfa21f36 404 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 201 215 1.0E-16 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMC99_02582 2061813fa6af79501b36e7eff888ddc7 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 204 7.1E-11 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMC99_02582 2061813fa6af79501b36e7eff888ddc7 210 Gene3D G3DSA:3.40.30.10 5 86 2.6E-17 T 11-10-2018 AMC99_02582 2061813fa6af79501b36e7eff888ddc7 210 SUPERFAMILY SSF52833 5 85 2.24E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02582 2061813fa6af79501b36e7eff888ddc7 210 Gene3D G3DSA:1.20.1050.10 90 207 1.0E-38 T 11-10-2018 AMC99_02582 2061813fa6af79501b36e7eff888ddc7 210 Pfam PF02798 Glutathione S-transferase, N-terminal domain 12 83 7.0E-7 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_02582 2061813fa6af79501b36e7eff888ddc7 210 SUPERFAMILY SSF47616 94 207 2.73E-26 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_00945 acdc55a63e5ef8bf7fe4fe96ef73e433 159 Pfam PF08534 Redoxin 5 156 8.8E-36 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMC99_00945 acdc55a63e5ef8bf7fe4fe96ef73e433 159 Gene3D G3DSA:3.40.30.10 3 159 3.0E-60 T 11-10-2018 AMC99_00945 acdc55a63e5ef8bf7fe4fe96ef73e433 159 SUPERFAMILY SSF52833 1 158 2.6E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02438 c202de3f665c64572f3041f84645869f 265 Gene3D G3DSA:3.90.226.10 2 205 3.4E-67 T 11-10-2018 AMC99_02438 c202de3f665c64572f3041f84645869f 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 264 2.7E-55 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_02438 c202de3f665c64572f3041f84645869f 265 Gene3D G3DSA:1.10.12.10 208 265 3.3E-16 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMC99_02438 c202de3f665c64572f3041f84645869f 265 SUPERFAMILY SSF52096 3 264 1.99E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_01710 3addce570d5a20d94f761a76bd9ef612 110 Pfam PF00462 Glutaredoxin 17 80 2.8E-21 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMC99_01710 3addce570d5a20d94f761a76bd9ef612 110 SUPERFAMILY SSF52833 1 103 6.56E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01710 3addce570d5a20d94f761a76bd9ef612 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 4.5E-46 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related AMC99_01710 3addce570d5a20d94f761a76bd9ef612 110 Gene3D G3DSA:3.40.30.10 7 103 6.1E-34 T 11-10-2018 AMC99_01710 3addce570d5a20d94f761a76bd9ef612 110 PIRSF PIRSF005894 1 108 2.9E-49 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AMC99_00151 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 Gene3D G3DSA:3.40.309.10 249 451 1.8E-145 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_00151 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 SUPERFAMILY SSF53720 2 483 7.85E-143 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_00151 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 Gene3D G3DSA:3.40.605.10 23 459 1.8E-145 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_00151 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 1.2E-199 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 AMC99_00151 0d03cc7b7b4c4b7dd898d34f2e7d15a9 499 Pfam PF00171 Aldehyde dehydrogenase family 19 478 1.5E-134 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_01389 5a5152c12b506d78ebf15ef04f9d801a 309 PIRSF PIRSF016660 2 303 1.1E-103 T 11-10-2018 IPR008526 Inner membrane protein YedI AMC99_01389 5a5152c12b506d78ebf15ef04f9d801a 309 Pfam PF05661 Protein of unknown function (DUF808) 2 290 7.4E-114 T 11-10-2018 IPR008526 Inner membrane protein YedI AMC99_01654 dd9e38d56379f5330fb7ac7defe5ff6f 522 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 11 232 2.8E-83 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein AMC99_01654 dd9e38d56379f5330fb7ac7defe5ff6f 522 Gene3D G3DSA:3.40.50.620 11 234 2.2E-123 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01654 dd9e38d56379f5330fb7ac7defe5ff6f 522 Gene3D G3DSA:1.25.40.80 136 323 2.2E-123 T 11-10-2018 AMC99_01654 dd9e38d56379f5330fb7ac7defe5ff6f 522 Gene3D G3DSA:1.10.10.1710 448 516 3.3E-27 T 11-10-2018 AMC99_01654 dd9e38d56379f5330fb7ac7defe5ff6f 522 Gene3D G3DSA:1.10.579.10 327 447 6.3E-53 T 11-10-2018 AMC99_01654 dd9e38d56379f5330fb7ac7defe5ff6f 522 SUPERFAMILY SSF48173 233 496 4.84E-56 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMC99_00181 3df4f2ce5d4879637ff4b58f0ccb0c0f 235 Pfam PF10531 SLBB domain 130 181 8.4E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00181 3df4f2ce5d4879637ff4b58f0ccb0c0f 235 Gene3D G3DSA:3.10.560.10 123 210 4.3E-14 T 11-10-2018 AMC99_00181 3df4f2ce5d4879637ff4b58f0ccb0c0f 235 Gene3D G3DSA:3.30.1950.10 57 122 2.0E-8 T 11-10-2018 AMC99_00181 3df4f2ce5d4879637ff4b58f0ccb0c0f 235 Pfam PF02563 Polysaccharide biosynthesis/export protein 48 123 1.1E-16 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 AMC99_00364 98317ee630e4b335b18381f0642cb4a1 402 Gene3D G3DSA:1.20.140.10 238 400 9.6E-26 T 11-10-2018 AMC99_00364 98317ee630e4b335b18381f0642cb4a1 402 SUPERFAMILY SSF56645 2 247 1.44E-65 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00364 98317ee630e4b335b18381f0642cb4a1 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 123 1.0E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00364 98317ee630e4b335b18381f0642cb4a1 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 222 3.4E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00364 98317ee630e4b335b18381f0642cb4a1 402 SUPERFAMILY SSF47203 234 397 3.06E-11 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00364 98317ee630e4b335b18381f0642cb4a1 402 Gene3D G3DSA:1.10.540.10 2 122 1.2E-25 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00364 98317ee630e4b335b18381f0642cb4a1 402 Gene3D G3DSA:2.40.110.10 127 237 2.8E-32 T 11-10-2018 AMC99_00364 98317ee630e4b335b18381f0642cb4a1 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 397 7.2E-13 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00857 34f86aba4868aee2469b1114af0a1b20 402 PIRSF PIRSF037238 5 397 4.3E-87 T 11-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase AMC99_00857 34f86aba4868aee2469b1114af0a1b20 402 Gene3D G3DSA:3.30.70.360 202 310 1.6E-94 T 11-10-2018 AMC99_00857 34f86aba4868aee2469b1114af0a1b20 402 SUPERFAMILY SSF55031 203 312 8.11E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMC99_00857 34f86aba4868aee2469b1114af0a1b20 402 Pfam PF07687 Peptidase dimerisation domain 200 296 4.3E-18 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMC99_00857 34f86aba4868aee2469b1114af0a1b20 402 SUPERFAMILY SSF53187 13 397 6.29E-42 T 11-10-2018 AMC99_00857 34f86aba4868aee2469b1114af0a1b20 402 Pfam PF01546 Peptidase family M20/M25/M40 96 392 4.7E-20 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMC99_00857 34f86aba4868aee2469b1114af0a1b20 402 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 95 104 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMC99_00857 34f86aba4868aee2469b1114af0a1b20 402 Gene3D G3DSA:3.40.630.10 28 385 1.6E-94 T 11-10-2018 AMC99_01992 8c292118de7fed37f747108c4900011d 301 SUPERFAMILY SSF88946 14 123 5.49E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 Pfam PF04545 Sigma-70, region 4 235 286 1.0E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 288 1.2E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 17 289 2.4E-110 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_01992 8c292118de7fed37f747108c4900011d 301 Pfam PF04542 Sigma-70 region 2 55 123 7.9E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 4 290 50.463 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_01992 8c292118de7fed37f747108c4900011d 301 Gene3D G3DSA:1.20.140.160 140 291 2.5E-15 T 11-10-2018 AMC99_01992 8c292118de7fed37f747108c4900011d 301 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 79 92 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 Pfam PF00140 Sigma-70 factor, region 1.2 17 46 3.3E-9 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_01992 8c292118de7fed37f747108c4900011d 301 PRINTS PR00046 Major sigma-70 factor signature 79 92 2.9E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 PRINTS PR00046 Major sigma-70 factor signature 273 284 2.9E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 PRINTS PR00046 Major sigma-70 factor signature 258 273 2.9E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 PRINTS PR00046 Major sigma-70 factor signature 239 251 2.9E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 PRINTS PR00046 Major sigma-70 factor signature 103 111 2.9E-22 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 PIRSF PIRSF000770 3 297 1.8E-39 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 Gene3D G3DSA:1.10.601.10 5 122 1.0E-31 T 11-10-2018 AMC99_01992 8c292118de7fed37f747108c4900011d 301 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 258 284 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AMC99_01992 8c292118de7fed37f747108c4900011d 301 SUPERFAMILY SSF88659 195 290 4.86E-21 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Gene3D G3DSA:3.10.20.310 124 201 6.8E-16 T 11-10-2018 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF07244 Surface antigen variable number repeat 205 292 5.4E-13 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF07244 Surface antigen variable number repeat 377 450 1.1E-8 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF07244 Surface antigen variable number repeat 124 201 3.3E-14 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF07244 Surface antigen variable number repeat 295 373 1.6E-8 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 27 882 22.771 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Gene3D G3DSA:3.10.20.310 368 453 3.9E-18 T 11-10-2018 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Gene3D G3DSA:3.10.20.310 296 367 3.4E-16 T 11-10-2018 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 PIRSF PIRSF006076 15 882 5.6E-242 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Pfam PF01103 Surface antigen 478 882 2.9E-66 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 57 882 7.3E-212 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Gene3D G3DSA:3.10.20.310 204 295 8.1E-20 T 11-10-2018 AMC99_00692 9c8b2e015723943e8e8c55f9ce76002e 882 Gene3D G3DSA:3.10.20.310 54 123 3.0E-14 T 11-10-2018 AMC99_02584 f5caddb467587ebf27a803f4b1be3536 539 SUPERFAMILY SSF56801 1 536 2.09E-150 T 11-10-2018 AMC99_02584 f5caddb467587ebf27a803f4b1be3536 539 Gene3D G3DSA:3.40.50.12780 2 434 1.1E-119 T 11-10-2018 AMC99_02584 f5caddb467587ebf27a803f4b1be3536 539 Pfam PF00501 AMP-binding enzyme 10 439 4.3E-105 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_02584 f5caddb467587ebf27a803f4b1be3536 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_02584 f5caddb467587ebf27a803f4b1be3536 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 523 1.2E-15 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_02584 f5caddb467587ebf27a803f4b1be3536 539 Gene3D G3DSA:3.30.300.30 435 534 2.2E-25 T 11-10-2018 AMC99_01974 f7c07e336644ab8d8bcec551fe00ea07 244 PIRSF PIRSF000370 13 244 6.4E-42 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AMC99_01974 f7c07e336644ab8d8bcec551fe00ea07 244 Gene3D G3DSA:3.20.20.70 13 237 1.1E-32 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01974 f7c07e336644ab8d8bcec551fe00ea07 244 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 13 241 35.339 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 AMC99_01974 f7c07e336644ab8d8bcec551fe00ea07 244 SUPERFAMILY SSF102114 34 128 3.4E-12 T 11-10-2018 AMC99_01974 f7c07e336644ab8d8bcec551fe00ea07 244 Pfam PF13394 4Fe-4S single cluster domain 32 131 1.3E-12 T 11-10-2018 AMC99_01974 f7c07e336644ab8d8bcec551fe00ea07 244 Pfam PF04055 Radical SAM superfamily 33 144 2.2E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_01740 36d1948b1673c1592df3a644cc41c75e 328 Pfam PF01758 Sodium Bile acid symporter family 45 222 6.8E-35 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AMC99_01740 36d1948b1673c1592df3a644cc41c75e 328 Gene3D G3DSA:1.20.1530.20 1 319 2.5E-92 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AMC99_01272 6f80e2885ef0fc312d97126e31b3796a 225 Gene3D G3DSA:3.40.50.150 31 198 2.2E-37 T 11-10-2018 AMC99_01272 6f80e2885ef0fc312d97126e31b3796a 225 SUPERFAMILY SSF53335 46 194 1.55E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01272 6f80e2885ef0fc312d97126e31b3796a 225 Pfam PF13847 Methyltransferase domain 56 165 6.9E-12 T 11-10-2018 IPR025714 Methyltransferase domain AMC99_02031 f412cd3cf5693edc0ef6f74be57665a7 139 SUPERFAMILY SSF111038 1 139 3.27E-51 T 11-10-2018 IPR035917 YjbQ-like superfamily AMC99_02031 f412cd3cf5693edc0ef6f74be57665a7 139 Pfam PF01894 Uncharacterised protein family UPF0047 20 135 1.7E-40 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMC99_02031 f412cd3cf5693edc0ef6f74be57665a7 139 Gene3D G3DSA:2.60.120.460 1 139 8.7E-46 T 11-10-2018 IPR035917 YjbQ-like superfamily AMC99_02031 f412cd3cf5693edc0ef6f74be57665a7 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 7 139 9.3E-46 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMC99_02031 f412cd3cf5693edc0ef6f74be57665a7 139 PIRSF PIRSF004681 1 139 9.6E-54 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 AMC99_02064 7abc7872cf8ccc94cd001b0e9025e07f 190 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 60 1.2E-8 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMC99_02064 7abc7872cf8ccc94cd001b0e9025e07f 190 SUPERFAMILY SSF54292 3 77 8.65E-24 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AMC99_02064 7abc7872cf8ccc94cd001b0e9025e07f 190 Gene3D G3DSA:1.10.150.120 75 182 8.1E-29 T 11-10-2018 AMC99_02064 7abc7872cf8ccc94cd001b0e9025e07f 190 SUPERFAMILY SSF47741 72 150 7.46E-29 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily AMC99_02064 7abc7872cf8ccc94cd001b0e9025e07f 190 Pfam PF01799 [2Fe-2S] binding domain 72 142 3.1E-27 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMC99_02064 7abc7872cf8ccc94cd001b0e9025e07f 190 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMC99_02064 7abc7872cf8ccc94cd001b0e9025e07f 190 Gene3D G3DSA:3.10.20.30 1 74 6.0E-28 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_02709 7ae6d0b15a9752687a53ccaaea5c4463 176 Pfam PF00583 Acetyltransferase (GNAT) family 48 151 5.6E-13 T 11-10-2018 IPR000182 GNAT domain AMC99_02709 7ae6d0b15a9752687a53ccaaea5c4463 176 SUPERFAMILY SSF55729 1 175 8.95E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02709 7ae6d0b15a9752687a53ccaaea5c4463 176 Gene3D G3DSA:3.40.630.30 1 175 3.4E-29 T 11-10-2018 AMC99_02672 d09d19fee04f3fab450fd511357438ab 271 Gene3D G3DSA:3.30.1300.10 163 271 2.6E-29 T 11-10-2018 AMC99_02672 d09d19fee04f3fab450fd511357438ab 271 Hamap MF_00158 Pantothenate synthetase [panC]. 1 267 37.429 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMC99_02672 d09d19fee04f3fab450fd511357438ab 271 SUPERFAMILY SSF52374 2 267 9.92E-101 T 11-10-2018 AMC99_02672 d09d19fee04f3fab450fd511357438ab 271 Pfam PF02569 Pantoate-beta-alanine ligase 2 265 3.2E-98 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMC99_02672 d09d19fee04f3fab450fd511357438ab 271 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 11 52 2.2E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMC99_02672 d09d19fee04f3fab450fd511357438ab 271 Gene3D G3DSA:3.40.50.620 1 156 2.6E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02672 d09d19fee04f3fab450fd511357438ab 271 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 267 1.9E-91 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AMC99_02296 af0b827c5bcdb176eecbe3dc7f52237a 86 Gene3D G3DSA:2.60.260.40 1 62 2.1E-21 T 11-10-2018 AMC99_02296 af0b827c5bcdb176eecbe3dc7f52237a 86 Pfam PF10276 Zinc-finger domain 13 59 4.5E-19 T 11-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 Pfam PF01145 SPFH domain / Band 7 family 22 192 4.1E-32 T 11-10-2018 IPR001107 Band 7 domain AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 11-10-2018 IPR018080 Band 7/stomatin-like, conserved site AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 SUPERFAMILY SSF117892 49 183 2.22E-42 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 SMART SM00244 18 176 2.8E-59 T 11-10-2018 IPR001107 Band 7 domain AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 Gene3D G3DSA:3.30.479.30 46 178 6.3E-44 T 11-10-2018 AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 171 192 2.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 108 125 2.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 73 94 2.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 152 170 2.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMC99_00020 e244dc8033d1ea3e9448f029dba5c47e 332 PRINTS PR00721 Stomatin signature 128 151 2.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMC99_00669 11cc4d1c78a5b28cc8d657dc3a4474dc 80 Pfam PF04800 ETC complex I subunit conserved region 1 80 1.1E-26 T 11-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AMC99_00669 11cc4d1c78a5b28cc8d657dc3a4474dc 80 Gene3D G3DSA:3.30.160.190 1 68 1.3E-24 T 11-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00295 f688374bc297d2ee40a0823f98e67eb8 220 SUPERFAMILY SSF46626 71 168 1.89E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_00295 f688374bc297d2ee40a0823f98e67eb8 220 Pfam PF00034 Cytochrome c 71 166 8.2E-7 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00295 f688374bc297d2ee40a0823f98e67eb8 220 Gene3D G3DSA:1.10.760.10 33 170 5.0E-37 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_00295 f688374bc297d2ee40a0823f98e67eb8 220 PRINTS PR00604 Class IA and IB cytochrome C signature 124 140 1.1E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00295 f688374bc297d2ee40a0823f98e67eb8 220 PRINTS PR00604 Class IA and IB cytochrome C signature 93 108 1.1E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00295 f688374bc297d2ee40a0823f98e67eb8 220 PRINTS PR00604 Class IA and IB cytochrome C signature 143 153 1.1E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00295 f688374bc297d2ee40a0823f98e67eb8 220 PRINTS PR00604 Class IA and IB cytochrome C signature 80 87 1.1E-12 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_01716 b11c8803e459dc8f8885ef1ec1389f1b 339 Gene3D G3DSA:3.20.20.100 1 326 8.2E-116 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMC99_01716 b11c8803e459dc8f8885ef1ec1389f1b 339 PRINTS PR00069 Aldo-keto reductase signature 114 132 3.4E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01716 b11c8803e459dc8f8885ef1ec1389f1b 339 PRINTS PR00069 Aldo-keto reductase signature 48 72 3.4E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01716 b11c8803e459dc8f8885ef1ec1389f1b 339 PRINTS PR00069 Aldo-keto reductase signature 145 162 3.4E-5 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_01716 b11c8803e459dc8f8885ef1ec1389f1b 339 SUPERFAMILY SSF51430 1 320 6.29E-100 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMC99_01716 b11c8803e459dc8f8885ef1ec1389f1b 339 Pfam PF00248 Aldo/keto reductase family 16 315 9.2E-69 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMC99_01096 fa64ad9f676794cf443af1ae3f96a95f 721 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 595 1.2E-196 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AMC99_01096 fa64ad9f676794cf443af1ae3f96a95f 721 Gene3D G3DSA:3.40.710.10 247 603 4.2E-83 T 11-10-2018 AMC99_01096 fa64ad9f676794cf443af1ae3f96a95f 721 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 238 1.6E-40 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMC99_01096 fa64ad9f676794cf443af1ae3f96a95f 721 SUPERFAMILY SSF56519 59 252 4.97E-44 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AMC99_01096 fa64ad9f676794cf443af1ae3f96a95f 721 Gene3D G3DSA:3.90.1310.10 66 246 2.7E-39 T 11-10-2018 AMC99_01096 fa64ad9f676794cf443af1ae3f96a95f 721 SUPERFAMILY SSF56601 253 595 1.82E-84 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_01096 fa64ad9f676794cf443af1ae3f96a95f 721 Gene3D G3DSA:3.30.1390.30 87 162 2.7E-39 T 11-10-2018 AMC99_01096 fa64ad9f676794cf443af1ae3f96a95f 721 Pfam PF00905 Penicillin binding protein transpeptidase domain 270 590 5.0E-58 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_00494 384132bb6f825780856d0a2527dc5e46 431 Gene3D G3DSA:2.160.20.10 11 275 9.0E-44 T 11-10-2018 IPR012334 Pectin lyase fold AMC99_00494 384132bb6f825780856d0a2527dc5e46 431 SUPERFAMILY SSF51126 15 350 1.02E-34 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AMC99_00150 30d73be1bf5e5e2f817532b4056178fa 297 SUPERFAMILY SSF46785 3 110 1.15E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00150 30d73be1bf5e5e2f817532b4056178fa 297 SUPERFAMILY SSF53850 88 288 3.88E-34 T 11-10-2018 AMC99_00150 30d73be1bf5e5e2f817532b4056178fa 297 Gene3D G3DSA:3.40.190.290 90 286 1.8E-36 T 11-10-2018 AMC99_00150 30d73be1bf5e5e2f817532b4056178fa 297 Gene3D G3DSA:1.10.10.10 3 83 7.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00150 30d73be1bf5e5e2f817532b4056178fa 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_00150 30d73be1bf5e5e2f817532b4056178fa 297 Pfam PF03466 LysR substrate binding domain 88 285 1.2E-31 T 11-10-2018 IPR005119 LysR, substrate-binding AMC99_00210 e8931c4f1980f3172ba33c36c7c39647 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.034 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00210 e8931c4f1980f3172ba33c36c7c39647 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 9.0E-8 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00210 e8931c4f1980f3172ba33c36c7c39647 41 SUPERFAMILY SSF57840 1 41 1.19E-12 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00210 e8931c4f1980f3172ba33c36c7c39647 41 Pfam PF00444 Ribosomal protein L36 1 41 1.8E-16 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02554 6b777a1dc76af662ebdfe509418e98a5 326 Pfam PF02195 ParB-like nuclease domain 66 155 2.2E-26 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AMC99_02554 6b777a1dc76af662ebdfe509418e98a5 326 Gene3D G3DSA:1.10.10.2830 142 252 1.9E-36 T 11-10-2018 AMC99_02554 6b777a1dc76af662ebdfe509418e98a5 326 SUPERFAMILY SSF109709 147 252 4.97E-34 T 11-10-2018 AMC99_02554 6b777a1dc76af662ebdfe509418e98a5 326 Gene3D G3DSA:3.90.1530.30 78 141 5.4E-28 T 11-10-2018 AMC99_02554 6b777a1dc76af662ebdfe509418e98a5 326 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 65 232 6.5E-57 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AMC99_02554 6b777a1dc76af662ebdfe509418e98a5 326 SMART SM00470 65 155 6.2E-34 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AMC99_02554 6b777a1dc76af662ebdfe509418e98a5 326 SUPERFAMILY SSF110849 66 157 2.88E-29 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AMC99_01038 476a2abbfc440bbda9af9374bb89f46b 543 Gene3D G3DSA:3.40.50.410 106 278 9.9E-25 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMC99_01038 476a2abbfc440bbda9af9374bb89f46b 543 SMART SM00327 106 277 6.3E-12 T 11-10-2018 IPR002035 von Willebrand factor, type A AMC99_01038 476a2abbfc440bbda9af9374bb89f46b 543 SUPERFAMILY SSF53300 110 262 2.23E-25 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMC99_01038 476a2abbfc440bbda9af9374bb89f46b 543 Pfam PF00092 von Willebrand factor type A domain 110 263 9.1E-14 T 11-10-2018 IPR002035 von Willebrand factor, type A AMC99_02608 debba7ce497a5221837e170f69329e02 367 Pfam PF00534 Glycosyl transferases group 1 186 334 5.4E-23 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMC99_02608 debba7ce497a5221837e170f69329e02 367 Gene3D G3DSA:3.40.50.2000 192 350 1.3E-32 T 11-10-2018 AMC99_02608 debba7ce497a5221837e170f69329e02 367 Pfam PF13439 Glycosyltransferase Family 4 13 174 2.1E-22 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMC99_02608 debba7ce497a5221837e170f69329e02 367 SUPERFAMILY SSF53756 1 362 2.45E-69 T 11-10-2018 AMC99_02608 debba7ce497a5221837e170f69329e02 367 Gene3D G3DSA:3.40.50.2000 1 191 4.0E-23 T 11-10-2018 AMC99_02783 d8fcd2e396abd27e63c4444b46c55bcb 280 Gene3D G3DSA:3.40.50.1000 154 277 9.5E-15 T 11-10-2018 IPR023214 HAD superfamily AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 277 54.921 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 1 274 3.9E-143 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 275 1.5E-137 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 Gene3D G3DSA:3.30.930.10 1 200 2.3E-106 T 11-10-2018 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 102 126 1.5E-64 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 237 253 1.5E-64 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 50 65 1.5E-64 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 151 166 1.5E-64 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 128 148 1.5E-64 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 71 91 1.5E-64 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 Gene3D G3DSA:1.20.58.180 201 277 2.1E-26 T 11-10-2018 AMC99_01113 8723c3a8c0467924025a20edeade1b09 288 SUPERFAMILY SSF55681 1 274 3.58E-127 T 11-10-2018 AMC99_02494 492402b0e6113aadaef2ebfde5b9688e 250 Pfam PF01458 Uncharacterized protein family (UPF0051) 57 221 2.6E-42 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMC99_02494 492402b0e6113aadaef2ebfde5b9688e 250 SUPERFAMILY SSF101960 58 245 6.93E-50 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AMC99_02235 88b219c0a138b7f093e536aa4e74759a 340 ProSitePatterns PS00534 Ferrochelatase signature. 205 223 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMC99_02235 88b219c0a138b7f093e536aa4e74759a 340 SUPERFAMILY SSF53800 17 339 5.89E-95 T 11-10-2018 AMC99_02235 88b219c0a138b7f093e536aa4e74759a 340 Gene3D G3DSA:3.40.50.1400 178 317 3.1E-83 T 11-10-2018 AMC99_02235 88b219c0a138b7f093e536aa4e74759a 340 TIGRFAM TIGR00109 hemH: ferrochelatase 16 331 2.2E-80 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMC99_02235 88b219c0a138b7f093e536aa4e74759a 340 Hamap MF_00323 Ferrochelatase [hemH]. 18 336 35.106 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMC99_02235 88b219c0a138b7f093e536aa4e74759a 340 Gene3D G3DSA:3.40.50.1400 19 336 3.1E-83 T 11-10-2018 AMC99_02235 88b219c0a138b7f093e536aa4e74759a 340 Pfam PF00762 Ferrochelatase 19 335 1.2E-101 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AMC99_00846 499ffe062c50479e1f7a72e53da03715 71 Pfam PF04024 PspC domain 20 69 2.4E-14 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal AMC99_00197 4fe0374ab4b09c8102821ff6fc05075d 374 Pfam PF12412 Protein of unknown function (DUF3667) 61 105 2.3E-19 T 11-10-2018 IPR022134 Protein of unknown function DUF3667 AMC99_00211 58d6064c03a6f3b45e3e0a86e6d6b9df 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 184 1.4E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMC99_00211 58d6064c03a6f3b45e3e0a86e6d6b9df 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 178 1.1E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMC99_00211 58d6064c03a6f3b45e3e0a86e6d6b9df 203 SUPERFAMILY SSF56784 6 196 2.86E-32 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_00211 58d6064c03a6f3b45e3e0a86e6d6b9df 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 70 182 6.9E-11 T 11-10-2018 AMC99_00211 58d6064c03a6f3b45e3e0a86e6d6b9df 203 Gene3D G3DSA:3.40.50.1000 4 199 1.1E-30 T 11-10-2018 IPR023214 HAD superfamily AMC99_00211 58d6064c03a6f3b45e3e0a86e6d6b9df 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.4E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMC99_00211 58d6064c03a6f3b45e3e0a86e6d6b9df 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 2.4E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMC99_00211 58d6064c03a6f3b45e3e0a86e6d6b9df 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 2.4E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMC99_01452 aea0e3783442611c1504af23ef57960a 791 Gene3D G3DSA:3.40.50.300 318 663 2.4E-114 T 11-10-2018 AMC99_01452 aea0e3783442611c1504af23ef57960a 791 SUPERFAMILY SSF52540 39 672 2.38E-176 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01452 aea0e3783442611c1504af23ef57960a 791 Pfam PF00580 UvrD/REP helicase N-terminal domain 45 310 1.5E-77 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMC99_01452 aea0e3783442611c1504af23ef57960a 791 Gene3D G3DSA:3.40.50.300 45 312 3.0E-96 T 11-10-2018 AMC99_01452 aea0e3783442611c1504af23ef57960a 791 Gene3D G3DSA:1.10.10.160 150 225 3.0E-96 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AMC99_01452 aea0e3783442611c1504af23ef57960a 791 Gene3D G3DSA:1.10.486.10 420 576 2.4E-114 T 11-10-2018 AMC99_01452 aea0e3783442611c1504af23ef57960a 791 Pfam PF13361 UvrD-like helicase C-terminal domain 315 642 7.5E-65 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 Gene3D G3DSA:3.40.50.1480 8 470 7.5E-225 T 11-10-2018 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 8 462 1.1E-176 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 231 390 6.6E-78 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 SUPERFAMILY SSF51735 231 390 1.68E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 PIRSF PIRSF001109 1 470 1.5E-183 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 SUPERFAMILY SSF52283 5 470 3.12E-113 T 11-10-2018 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 3 462 47.274 T 11-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 7 469 2.9E-140 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 Gene3D G3DSA:3.40.50.720 233 390 7.5E-225 T 11-10-2018 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 SMART SM00997 231 390 3.2E-105 T 11-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 SMART SM00996 7 469 0.0 T 11-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMC99_00946 224c8223a0b99a59d7c737cd021ed3c8 470 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 253 269 - T 11-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 AMC99_02115 6c8377a3476f8c368e41df1b914c3c50 512 Gene3D G3DSA:3.40.50.300 219 399 5.0E-26 T 11-10-2018 AMC99_02115 6c8377a3476f8c368e41df1b914c3c50 512 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 27 345 1.1E-49 T 11-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AMC99_02115 6c8377a3476f8c368e41df1b914c3c50 512 SUPERFAMILY SSF52540 27 395 6.45E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01480 d92bfdcf7c8008764682b075db187c11 280 PIRSF PIRSF016184 1 277 5.6E-56 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMC99_01480 d92bfdcf7c8008764682b075db187c11 280 Pfam PF02567 Phenazine biosynthesis-like protein 6 271 3.4E-41 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMC99_01480 d92bfdcf7c8008764682b075db187c11 280 Gene3D G3DSA:3.10.310.10 122 270 6.7E-63 T 11-10-2018 AMC99_01480 d92bfdcf7c8008764682b075db187c11 280 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 272 8.4E-42 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMC99_01480 d92bfdcf7c8008764682b075db187c11 280 SUPERFAMILY SSF54506 3 273 1.45E-56 T 11-10-2018 AMC99_01480 d92bfdcf7c8008764682b075db187c11 280 Gene3D G3DSA:3.10.310.10 6 271 6.7E-63 T 11-10-2018 AMC99_00869 c51d9a6c4353ba60eefb2b5d213f6f04 244 Gene3D G3DSA:1.20.120.1630 43 240 2.1E-18 T 11-10-2018 AMC99_02346 dd8c308f16fb18d114658fb7c47820e4 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 7.6E-21 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02346 dd8c308f16fb18d114658fb7c47820e4 55 SUPERFAMILY SSF57829 1 53 1.04E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMC99_02346 dd8c308f16fb18d114658fb7c47820e4 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_02346 dd8c308f16fb18d114658fb7c47820e4 55 Gene3D G3DSA:2.20.28.120 1 55 3.0E-26 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02346 dd8c308f16fb18d114658fb7c47820e4 55 Pfam PF00471 Ribosomal protein L33 7 53 7.0E-16 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02346 dd8c308f16fb18d114658fb7c47820e4 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 12.847 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00880 31fdd1f316aab4b668af5fab6819ec82 304 SUPERFAMILY SSF52402 1 208 2.23E-69 T 11-10-2018 AMC99_00880 31fdd1f316aab4b668af5fab6819ec82 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 8 304 1.7E-140 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMC99_00880 31fdd1f316aab4b668af5fab6819ec82 304 PIRSF PIRSF002936 1 304 2.0E-142 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 AMC99_00880 31fdd1f316aab4b668af5fab6819ec82 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 258 4.7E-57 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 AMC99_00880 31fdd1f316aab4b668af5fab6819ec82 304 Gene3D G3DSA:3.40.50.620 6 210 2.5E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 SUPERFAMILY SSF52402 196 418 2.87E-60 T 11-10-2018 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Pfam PF00958 GMP synthase C terminal domain 432 523 1.5E-41 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Gene3D G3DSA:3.40.50.880 7 209 1.1E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Gene3D G3DSA:3.40.50.620 210 404 1.1E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 202 8.2E-67 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Gene3D G3DSA:3.30.300.10 405 524 8.0E-50 T 11-10-2018 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Pfam PF02540 NAD synthase 215 254 2.5E-6 T 11-10-2018 IPR022310 NAD/GMP synthase AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00097 Anthranilate synthase component II signature 81 92 9.0E-5 T 11-10-2018 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00097 Anthranilate synthase component II signature 176 189 9.0E-5 T 11-10-2018 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Pfam PF00117 Glutamine amidotransferase class-I 12 199 5.1E-37 T 11-10-2018 IPR017926 Glutamine amidotransferase AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 214 524 4.0E-147 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 SUPERFAMILY SSF54810 404 524 2.75E-49 T 11-10-2018 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 524 53.509 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 SUPERFAMILY SSF52317 8 236 2.5E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 9.2E-7 T 11-10-2018 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 176 189 9.2E-7 T 11-10-2018 AMC99_02303 8d4277a26e12ef6b2a4a6b9cad55f8e6 524 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 9.2E-7 T 11-10-2018 AMC99_02469 def54b323e70924c2049fd95327597fd 230 Pfam PF13462 Thioredoxin 74 226 1.1E-18 T 11-10-2018 IPR012336 Thioredoxin-like fold AMC99_02469 def54b323e70924c2049fd95327597fd 230 Gene3D G3DSA:3.40.30.10 64 229 2.7E-37 T 11-10-2018 AMC99_02469 def54b323e70924c2049fd95327597fd 230 SUPERFAMILY SSF52833 68 226 5.49E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01349 11db507309bac818b7630417b0801794 130 Gene3D G3DSA:1.10.4040.10 79 130 3.3E-7 T 11-10-2018 AMC99_01349 11db507309bac818b7630417b0801794 130 SUPERFAMILY SSF46785 11 129 4.36E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01349 11db507309bac818b7630417b0801794 130 Pfam PF03965 Penicillinase repressor 12 126 4.9E-30 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMC99_01349 11db507309bac818b7630417b0801794 130 Gene3D G3DSA:1.10.10.10 11 78 6.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01349 11db507309bac818b7630417b0801794 130 PIRSF PIRSF019455 5 130 1.1E-34 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMC99_01510 d6d246cbf92e6f845a0f2d56a620af38 306 Pfam PF02517 CAAX protease self-immunity 143 229 1.1E-11 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMC99_01835 155f92c05a85aec0124b8c774002dd9d 152 SUPERFAMILY SSF55620 24 143 2.45E-25 T 11-10-2018 AMC99_01835 155f92c05a85aec0124b8c774002dd9d 152 Pfam PF14489 QueF-like protein 56 134 4.0E-31 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMC99_01835 155f92c05a85aec0124b8c774002dd9d 152 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 131 7.0E-40 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMC99_01835 155f92c05a85aec0124b8c774002dd9d 152 PIRSF PIRSF027377 2 137 5.3E-49 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMC99_01835 155f92c05a85aec0124b8c774002dd9d 152 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 152 63.782 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 AMC99_01835 155f92c05a85aec0124b8c774002dd9d 152 Gene3D G3DSA:3.30.1130.10 17 137 2.2E-35 T 11-10-2018 AMC99_00799 ba521e6ddcb0485b97f8f495d32fcb60 151 Gene3D G3DSA:3.10.129.10 1 149 6.1E-52 T 11-10-2018 AMC99_00799 ba521e6ddcb0485b97f8f495d32fcb60 151 Pfam PF01575 MaoC like domain 11 120 2.1E-22 T 11-10-2018 IPR002539 MaoC-like dehydratase domain AMC99_00799 ba521e6ddcb0485b97f8f495d32fcb60 151 SUPERFAMILY SSF54637 1 149 7.76E-47 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00909 b2ffe2888d7646119ddcc2d06b866eb9 301 Pfam PF07650 KH domain 222 285 1.5E-16 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_00909 b2ffe2888d7646119ddcc2d06b866eb9 301 Hamap MF_00367 GTPase Era [era]. 7 297 32.284 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00909 b2ffe2888d7646119ddcc2d06b866eb9 301 Gene3D G3DSA:3.30.300.20 186 300 4.7E-35 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMC99_00909 b2ffe2888d7646119ddcc2d06b866eb9 301 SUPERFAMILY SSF54814 182 299 2.55E-37 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMC99_00909 b2ffe2888d7646119ddcc2d06b866eb9 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 162 2.7E-20 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_00909 b2ffe2888d7646119ddcc2d06b866eb9 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 1.3E-72 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00909 b2ffe2888d7646119ddcc2d06b866eb9 301 Gene3D G3DSA:3.40.50.300 4 184 2.2E-44 T 11-10-2018 AMC99_00909 b2ffe2888d7646119ddcc2d06b866eb9 301 SUPERFAMILY SSF52540 11 212 4.91E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00909 b2ffe2888d7646119ddcc2d06b866eb9 301 Pfam PF01926 50S ribosome-binding GTPase 12 126 9.6E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_01343 35e2dc9e94b541ade2de07d00c46a454 501 SUPERFAMILY SSF53187 48 494 1.67E-47 T 11-10-2018 AMC99_01343 35e2dc9e94b541ade2de07d00c46a454 501 Pfam PF04389 Peptidase family M28 278 476 6.5E-33 T 11-10-2018 IPR007484 Peptidase M28 AMC99_01343 35e2dc9e94b541ade2de07d00c46a454 501 Gene3D G3DSA:3.40.630.10 207 493 7.1E-44 T 11-10-2018 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 Gene3D G3DSA:2.70.150.20 122 249 8.2E-32 T 11-10-2018 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 347 353 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 548 567 4.2E-25 T 11-10-2018 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 572 584 4.2E-25 T 11-10-2018 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 179 193 4.2E-25 T 11-10-2018 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 345 359 4.2E-25 T 11-10-2018 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 473 484 4.2E-25 T 11-10-2018 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 506 4.2E-25 T 11-10-2018 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 Pfam PF00702 haloacid dehalogenase-like hydrolase 342 561 1.7E-41 T 11-10-2018 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 SUPERFAMILY SSF56784 344 647 2.83E-47 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 SUPERFAMILY SSF81653 132 245 7.98E-25 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 Gene3D G3DSA:3.40.50.1000 326 600 7.8E-80 T 11-10-2018 IPR023214 HAD superfamily AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 Gene3D G3DSA:3.40.1110.10 356 480 7.8E-80 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 102 378 2.0E-40 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 447 625 7.7E-35 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 79 650 9.8E-169 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 SUPERFAMILY SSF81665 82 339 3.01E-21 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 AMC99_00084 aac6fbc015addd28d9c00705f3f4e67a 655 Pfam PF00122 E1-E2 ATPase 129 324 1.2E-51 T 11-10-2018 AMC99_01653 27934bfa06796e15db3a76431456ccc4 198 SUPERFAMILY SSF52218 1 198 7.61E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMC99_01653 27934bfa06796e15db3a76431456ccc4 198 Pfam PF02525 Flavodoxin-like fold 1 197 8.6E-40 T 11-10-2018 IPR003680 Flavodoxin-like fold AMC99_01653 27934bfa06796e15db3a76431456ccc4 198 Gene3D G3DSA:3.40.50.360 2 198 2.6E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMC99_01653 27934bfa06796e15db3a76431456ccc4 198 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 198 28.283 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 AMC99_00487 96d5e54081451b87e998779461fd009b 340 Gene3D G3DSA:1.10.260.40 6 60 3.0E-23 T 11-10-2018 AMC99_00487 96d5e54081451b87e998779461fd009b 340 SUPERFAMILY SSF47413 7 64 1.93E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_00487 96d5e54081451b87e998779461fd009b 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 2.6E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMC99_00487 96d5e54081451b87e998779461fd009b 340 Pfam PF13377 Periplasmic binding protein-like domain 176 334 5.5E-36 T 11-10-2018 AMC99_00487 96d5e54081451b87e998779461fd009b 340 SMART SM00354 7 77 1.6E-26 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMC99_00487 96d5e54081451b87e998779461fd009b 340 Gene3D G3DSA:3.40.50.2300 61 309 3.1E-62 T 11-10-2018 AMC99_00487 96d5e54081451b87e998779461fd009b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 19 29 3.1E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMC99_00487 96d5e54081451b87e998779461fd009b 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 9 19 3.1E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 AMC99_00487 96d5e54081451b87e998779461fd009b 340 SUPERFAMILY SSF53822 68 337 4.12E-62 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMC99_00487 96d5e54081451b87e998779461fd009b 340 Gene3D G3DSA:3.40.50.2300 168 297 3.1E-62 T 11-10-2018 AMC99_00487 96d5e54081451b87e998779461fd009b 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 11-10-2018 AMC99_00600 d22d1ffbf521daaa245240bfdb839ceb 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.9E-16 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain AMC99_00600 d22d1ffbf521daaa245240bfdb839ceb 99 SUPERFAMILY SSF54909 1 82 4.16E-25 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMC99_00600 d22d1ffbf521daaa245240bfdb839ceb 99 Gene3D G3DSA:3.30.70.100 2 97 1.1E-25 T 11-10-2018 AMC99_02300 5143edd91013234eae49d24454f8d309 226 SUPERFAMILY SSF48150 30 217 1.24E-59 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMC99_02300 5143edd91013234eae49d24454f8d309 226 PIRSF PIRSF001435 9 219 1.2E-48 T 11-10-2018 AMC99_02300 5143edd91013234eae49d24454f8d309 226 Pfam PF00633 Helix-hairpin-helix motif 108 136 4.4E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AMC99_02300 5143edd91013234eae49d24454f8d309 226 Gene3D G3DSA:1.10.1670.10 141 211 5.8E-60 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMC99_02300 5143edd91013234eae49d24454f8d309 226 Gene3D G3DSA:1.10.340.30 34 140 5.8E-60 T 11-10-2018 AMC99_02300 5143edd91013234eae49d24454f8d309 226 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 172 1.4E-18 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_02300 5143edd91013234eae49d24454f8d309 226 SMART SM00478 46 193 5.5E-41 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_02300 5143edd91013234eae49d24454f8d309 226 SMART SM00525 194 214 3.6E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AMC99_01268 aac852ebcff2f33290b76709012a2277 433 Gene3D G3DSA:1.10.3430.10 15 433 3.7E-128 T 11-10-2018 IPR029020 Ammonium/urea transporter AMC99_01268 aac852ebcff2f33290b76709012a2277 433 TIGRFAM TIGR00836 amt: ammonium transporter 33 428 6.9E-118 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 AMC99_01268 aac852ebcff2f33290b76709012a2277 433 ProSitePatterns PS01219 Ammonium transporters signature. 186 211 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 AMC99_01268 aac852ebcff2f33290b76709012a2277 433 Pfam PF00909 Ammonium Transporter Family 35 428 4.0E-105 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 AMC99_01268 aac852ebcff2f33290b76709012a2277 433 SUPERFAMILY SSF111352 30 411 9.81E-116 T 11-10-2018 AMC99_00764 4c304d0efe903b69bddb56d5d9c49b99 124 Gene3D G3DSA:1.10.10.10 2 102 3.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00764 4c304d0efe903b69bddb56d5d9c49b99 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 3.7E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00764 4c304d0efe903b69bddb56d5d9c49b99 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.7E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00764 4c304d0efe903b69bddb56d5d9c49b99 124 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.7E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00764 4c304d0efe903b69bddb56d5d9c49b99 124 SMART SM00418 11 89 2.2E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00764 4c304d0efe903b69bddb56d5d9c49b99 124 Pfam PF01022 Bacterial regulatory protein, arsR family 18 63 1.5E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00764 4c304d0efe903b69bddb56d5d9c49b99 124 SUPERFAMILY SSF46785 1 100 4.03E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00173 cdb3d18a1f6db15cca1c988ba7539fc8 255 SUPERFAMILY SSF53448 42 204 1.1E-8 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00173 cdb3d18a1f6db15cca1c988ba7539fc8 255 Gene3D G3DSA:3.90.550.10 7 222 1.3E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00173 cdb3d18a1f6db15cca1c988ba7539fc8 255 Pfam PF13712 Glycosyltransferase like family 8 171 3.1E-9 T 11-10-2018 AMC99_02025 e9f14fd0e15f3dc0b36a874326143775 435 Gene3D G3DSA:3.40.50.300 32 411 8.9E-117 T 11-10-2018 AMC99_02025 e9f14fd0e15f3dc0b36a874326143775 435 Pfam PF13469 Sulfotransferase family 116 370 6.4E-42 T 11-10-2018 AMC99_02025 e9f14fd0e15f3dc0b36a874326143775 435 SUPERFAMILY SSF52540 92 381 6.83E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00540 40353ec7f4b0b7128bf4b0c1783e0a7a 294 Pfam PF02678 Pirin 16 121 2.6E-33 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 AMC99_00540 40353ec7f4b0b7128bf4b0c1783e0a7a 294 Gene3D G3DSA:2.60.120.10 16 266 2.2E-58 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_00540 40353ec7f4b0b7128bf4b0c1783e0a7a 294 Gene3D G3DSA:2.60.120.10 141 240 2.2E-58 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_00540 40353ec7f4b0b7128bf4b0c1783e0a7a 294 PIRSF PIRSF006232 1 279 2.9E-75 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 AMC99_00540 40353ec7f4b0b7128bf4b0c1783e0a7a 294 SUPERFAMILY SSF51182 4 282 1.4E-71 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMC99_00540 40353ec7f4b0b7128bf4b0c1783e0a7a 294 Pfam PF05726 Pirin C-terminal cupin domain 172 270 1.0E-18 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 Gene3D G3DSA:3.10.20.600 303 397 4.7E-22 T 11-10-2018 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 SUPERFAMILY SSF142984 315 395 2.48E-19 T 11-10-2018 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 237 252 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 SUPERFAMILY SSF142019 80 297 1.11E-76 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 SMART SM00928 400 445 8.0E-15 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 413 424 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 Gene3D G3DSA:1.20.1440.230 398 505 1.4E-19 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 402 503 8.5E-26 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 130 289 2.0E-45 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 Gene3D G3DSA:3.40.50.11540 133 301 1.7E-65 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_00156 6939243cd510abf9c25a2c9b491f820c 508 SUPERFAMILY SSF140490 397 502 6.15E-22 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_02726 a603e14352e3615bae75902ddf5a2a45 137 Gene3D G3DSA:3.90.1720.10 2 132 8.8E-12 T 11-10-2018 AMC99_02726 a603e14352e3615bae75902ddf5a2a45 137 SUPERFAMILY SSF54001 2 120 2.49E-10 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMC99_01318 041177d41ea359100eb160795169593c 327 Gene3D G3DSA:1.20.144.10 221 322 3.0E-6 T 11-10-2018 AMC99_01318 041177d41ea359100eb160795169593c 327 Pfam PF14378 PAP2 superfamily 116 300 9.4E-21 T 11-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AMC99_00545 aec12165b819f7780db0cefdb4e8c885 209 Gene3D G3DSA:3.40.30.10 7 194 6.2E-42 T 11-10-2018 AMC99_00545 aec12165b819f7780db0cefdb4e8c885 209 SUPERFAMILY SSF47616 89 198 3.34E-18 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_00545 aec12165b819f7780db0cefdb4e8c885 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 172 6.0E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMC99_00545 aec12165b819f7780db0cefdb4e8c885 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 77 8.3E-11 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_00545 aec12165b819f7780db0cefdb4e8c885 209 Gene3D G3DSA:1.20.1050.10 84 190 6.2E-42 T 11-10-2018 AMC99_00545 aec12165b819f7780db0cefdb4e8c885 209 SUPERFAMILY SSF52833 2 87 8.24E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02521 2b387596fe081053f6598b47e0240482 252 SMART SM00850 149 251 1.5E-22 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_02521 2b387596fe081053f6598b47e0240482 252 SUPERFAMILY SSF52172 10 141 6.97E-34 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02521 2b387596fe081053f6598b47e0240482 252 Pfam PF04397 LytTr DNA-binding domain 150 249 9.6E-17 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_02521 2b387596fe081053f6598b47e0240482 252 Gene3D G3DSA:3.40.50.2300 5 139 1.1E-33 T 11-10-2018 AMC99_02521 2b387596fe081053f6598b47e0240482 252 SMART SM00448 11 122 1.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02521 2b387596fe081053f6598b47e0240482 252 Gene3D G3DSA:2.40.50.40 141 213 7.1E-6 T 11-10-2018 AMC99_02521 2b387596fe081053f6598b47e0240482 252 Pfam PF00072 Response regulator receiver domain 14 122 9.8E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02536 47d60a23225e4dc810f8828ed0cbe261 189 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 189 20.072 T 11-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid AMC99_02536 47d60a23225e4dc810f8828ed0cbe261 189 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 131 184 9.6E-14 T 11-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal AMC99_02536 47d60a23225e4dc810f8828ed0cbe261 189 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 1.9E-18 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMC99_02536 47d60a23225e4dc810f8828ed0cbe261 189 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 96 1.3E-17 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMC99_02536 47d60a23225e4dc810f8828ed0cbe261 189 Gene3D G3DSA:3.30.160.100 1 109 3.8E-19 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMC99_02536 47d60a23225e4dc810f8828ed0cbe261 189 Gene3D G3DSA:3.30.505.50 145 189 3.9E-9 T 11-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily AMC99_02536 47d60a23225e4dc810f8828ed0cbe261 189 SUPERFAMILY SSF69754 2 104 2.49E-25 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMC99_02800 82d1558db4120bb96adba6bf3144796f 151 Pfam PF13673 Acetyltransferase (GNAT) domain 42 129 2.9E-11 T 11-10-2018 IPR000182 GNAT domain AMC99_02800 82d1558db4120bb96adba6bf3144796f 151 SUPERFAMILY SSF55729 15 129 1.62E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02800 82d1558db4120bb96adba6bf3144796f 151 Gene3D G3DSA:3.40.630.30 6 136 2.2E-30 T 11-10-2018 AMC99_01497 278288fde9c90f40c319910b9c85ceb5 439 Gene3D G3DSA:1.25.40.10 5 154 1.6E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01497 278288fde9c90f40c319910b9c85ceb5 439 Pfam PF04575 Protein of unknown function (DUF560) 162 428 2.1E-12 T 11-10-2018 IPR007655 Protein of unknown function DUF560 AMC99_01497 278288fde9c90f40c319910b9c85ceb5 439 Pfam PF14559 Tetratricopeptide repeat 83 131 3.4E-6 T 11-10-2018 AMC99_01497 278288fde9c90f40c319910b9c85ceb5 439 SUPERFAMILY SSF48452 31 131 9.05E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02176 c4545e54ace3bab99f00cc6a46db096e 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 252 7.7E-50 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_02176 c4545e54ace3bab99f00cc6a46db096e 253 SUPERFAMILY SSF52096 1 252 1.19E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02176 c4545e54ace3bab99f00cc6a46db096e 253 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 95 115 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMC99_02176 c4545e54ace3bab99f00cc6a46db096e 253 Gene3D G3DSA:3.90.226.10 1 195 1.7E-67 T 11-10-2018 AMC99_02176 c4545e54ace3bab99f00cc6a46db096e 253 Gene3D G3DSA:1.10.12.10 196 253 4.8E-25 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMC99_02630 2d0c46bde36e32598d271e4fe0987c4f 99 Gene3D G3DSA:1.10.10.10 10 95 3.8E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02630 2d0c46bde36e32598d271e4fe0987c4f 99 Pfam PF06627 Protein of unknown function (DUF1153) 7 90 1.3E-40 T 11-10-2018 IPR009534 Protein of unknown function DUF1153 AMC99_02630 2d0c46bde36e32598d271e4fe0987c4f 99 SUPERFAMILY SSF48295 7 90 6.28E-19 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 Gene3D G3DSA:3.40.50.1820 4 375 2.8E-142 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 316 332 2.2E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 171 184 2.2E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 126 141 2.2E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 348 370 2.2E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 185 198 2.2E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 PRINTS PR00412 Epoxide hydrolase signature 100 118 2.2E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 Pfam PF06441 Epoxide hydrolase N terminus 4 109 2.8E-34 T 11-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 SUPERFAMILY SSF53474 3 373 1.66E-105 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01042 0b99a6a7c82305e7c53de028ea92da13 375 PIRSF PIRSF001112 1 375 1.8E-127 T 11-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 AMC99_02255 15850b499df9eb03907c7457444d561b 281 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 24 6.1E-8 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative AMC99_00434 d8829c750ef4015c755dcbeb44c748c6 258 Gene3D G3DSA:3.20.20.70 1 258 1.8E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00434 d8829c750ef4015c755dcbeb44c748c6 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 44.713 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AMC99_00434 d8829c750ef4015c755dcbeb44c748c6 258 Pfam PF00977 Histidine biosynthesis protein 6 240 1.7E-84 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 AMC99_00434 d8829c750ef4015c755dcbeb44c748c6 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 5 256 1.6E-98 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 AMC99_00434 d8829c750ef4015c755dcbeb44c748c6 258 SUPERFAMILY SSF51366 4 256 7.85E-79 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMC99_00550 510c870717f9438aff1dc1267f33e63d 352 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 254 306 7.2E-5 T 11-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal AMC99_00550 510c870717f9438aff1dc1267f33e63d 352 Pfam PF07728 AAA domain (dynein-related subfamily) 96 220 2.3E-10 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMC99_00550 510c870717f9438aff1dc1267f33e63d 352 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 39 69 2.2E-14 T 11-10-2018 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 AMC99_00550 510c870717f9438aff1dc1267f33e63d 352 Gene3D G3DSA:3.40.50.300 81 259 3.3E-21 T 11-10-2018 AMC99_00550 510c870717f9438aff1dc1267f33e63d 352 SUPERFAMILY SSF52540 64 309 5.35E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00400 1343b0ca5ad5551285aaca7996569019 189 SUPERFAMILY SSF50814 33 188 5.02E-39 T 11-10-2018 IPR012674 Calycin AMC99_00400 1343b0ca5ad5551285aaca7996569019 189 Pfam PF08212 Lipocalin-like domain 40 185 1.7E-37 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain AMC99_00400 1343b0ca5ad5551285aaca7996569019 189 PRINTS PR01171 Bacterial lipocalin signature 40 54 1.2E-15 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMC99_00400 1343b0ca5ad5551285aaca7996569019 189 PRINTS PR01171 Bacterial lipocalin signature 57 73 1.2E-15 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMC99_00400 1343b0ca5ad5551285aaca7996569019 189 PRINTS PR01171 Bacterial lipocalin signature 111 125 1.2E-15 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMC99_00400 1343b0ca5ad5551285aaca7996569019 189 PRINTS PR01171 Bacterial lipocalin signature 76 85 1.2E-15 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 AMC99_00400 1343b0ca5ad5551285aaca7996569019 189 Gene3D G3DSA:2.40.128.20 28 188 2.2E-45 T 11-10-2018 IPR012674 Calycin AMC99_00400 1343b0ca5ad5551285aaca7996569019 189 PIRSF PIRSF036893 2 189 2.6E-42 T 11-10-2018 IPR022271 Lipocalin, ApoD type AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.1E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 Gene3D G3DSA:3.40.50.720 3 255 9.3E-79 T 11-10-2018 AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 251 3.0E-66 T 11-10-2018 AMC99_01395 e2ac09051cb25fb20beb293a4cb2844d 256 SUPERFAMILY SSF51735 13 253 1.93E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00769 273561c25ef642d02c2508c4aab681a0 135 Gene3D G3DSA:3.90.190.10 1 135 4.6E-40 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMC99_00769 273561c25ef642d02c2508c4aab681a0 135 SUPERFAMILY SSF52799 6 105 1.62E-6 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMC99_00769 273561c25ef642d02c2508c4aab681a0 135 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 4 135 1.1E-33 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AMC99_00769 273561c25ef642d02c2508c4aab681a0 135 Pfam PF04273 Putative phosphatase (DUF442) 4 108 6.7E-31 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AMC99_00091 455606dc7ad3b3b551ac44a199a467fa 121 SUPERFAMILY SSF54427 2 114 1.19E-20 T 11-10-2018 IPR032710 NTF2-like domain superfamily AMC99_00091 455606dc7ad3b3b551ac44a199a467fa 121 Gene3D G3DSA:3.10.450.50 1 114 1.5E-31 T 11-10-2018 AMC99_00091 455606dc7ad3b3b551ac44a199a467fa 121 Pfam PF13474 SnoaL-like domain 2 115 1.8E-14 T 11-10-2018 IPR037401 SnoaL-like domain AMC99_00098 75fdfc8c5e050d0a5e644fc6b2acd662 156 SUPERFAMILY SSF52833 31 108 3.08E-6 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00098 75fdfc8c5e050d0a5e644fc6b2acd662 156 Pfam PF04214 Protein of unknown function, DUF 59 128 1.2E-31 T 11-10-2018 IPR007332 Protein of unknown function DUF411 AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 Gene3D G3DSA:3.40.50.300 11 188 1.9E-52 T 11-10-2018 AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 SUPERFAMILY SSF52540 22 172 3.41E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 Pfam PF01202 Shikimate kinase 30 185 2.4E-47 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 24 39 8.9E-21 T 11-10-2018 AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 94 103 8.9E-21 T 11-10-2018 AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 48 61 8.9E-21 T 11-10-2018 AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 76 84 8.9E-21 T 11-10-2018 AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 PRINTS PR01100 Shikimate kinase family signature 115 132 8.9E-21 T 11-10-2018 AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 Hamap MF_00109 Shikimate kinase [aroK]. 21 186 27.085 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMC99_00931 8aee9aea69b059dde1ab932f07a2a70f 189 ProSitePatterns PS01128 Shikimate kinase signature. 77 102 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 AMC99_00143 91de5bf00c6c30dee08ecdbfaa496fd5 363 SUPERFAMILY SSF47240 96 261 1.04E-43 T 11-10-2018 IPR009078 Ferritin-like superfamily AMC99_00143 91de5bf00c6c30dee08ecdbfaa496fd5 363 Gene3D G3DSA:1.20.1260.10 99 262 6.5E-35 T 11-10-2018 IPR012347 Ferritin-like AMC99_00143 91de5bf00c6c30dee08ecdbfaa496fd5 363 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 44 262 8.0E-17 T 11-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 92 106 4.9E-20 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 320 335 4.9E-20 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 261 276 4.9E-20 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 170 182 4.9E-20 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00458 Haem peroxidase superfamily signature 152 169 4.9E-20 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_00260 6bf6cd0422596b061088980749043573 738 Hamap MF_01961 Catalase-peroxidase [katG]. 7 733 38.023 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMC99_00260 6bf6cd0422596b061088980749043573 738 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 25 733 3.3E-304 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 28 50 1.5E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 482 508 1.5E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 269 292 1.5E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 69 94 1.5E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMC99_00260 6bf6cd0422596b061088980749043573 738 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 54 67 1.5E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 AMC99_00260 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.520.10 435 732 4.4E-119 T 11-10-2018 AMC99_00260 6bf6cd0422596b061088980749043573 738 Pfam PF00141 Peroxidase 79 400 5.4E-50 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_00260 6bf6cd0422596b061088980749043573 738 Pfam PF00141 Peroxidase 407 707 6.8E-33 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_00260 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.420.10 580 708 4.4E-119 T 11-10-2018 AMC99_00260 6bf6cd0422596b061088980749043573 738 SUPERFAMILY SSF48113 23 433 3.68E-141 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_00260 6bf6cd0422596b061088980749043573 738 ProSitePatterns PS00436 Peroxidases active site signature. 92 103 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 AMC99_00260 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.420.20 192 401 6.5E-195 T 11-10-2018 AMC99_00260 6bf6cd0422596b061088980749043573 738 Gene3D G3DSA:1.10.520.10 25 434 6.5E-195 T 11-10-2018 AMC99_00260 6bf6cd0422596b061088980749043573 738 SUPERFAMILY SSF48113 434 732 2.5E-90 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 AMC99_02697 28352f0a947d39379497aae01a6c9b7c 302 SMART SM00342 180 264 6.5E-6 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_02697 28352f0a947d39379497aae01a6c9b7c 302 SUPERFAMILY SSF46689 236 267 1.66E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_02697 28352f0a947d39379497aae01a6c9b7c 302 Pfam PF12833 Helix-turn-helix domain 187 265 6.3E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_02697 28352f0a947d39379497aae01a6c9b7c 302 Gene3D G3DSA:1.10.10.60 167 269 1.4E-16 T 11-10-2018 AMC99_00363 9b06560daddab585848661e6ead22b0f 369 SUPERFAMILY SSF56645 1 218 1.24E-45 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00363 9b06560daddab585848661e6ead22b0f 369 Gene3D G3DSA:1.10.540.10 1 119 8.7E-31 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00363 9b06560daddab585848661e6ead22b0f 369 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 208 1.9E-8 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00363 9b06560daddab585848661e6ead22b0f 369 SUPERFAMILY SSF47203 224 365 1.4E-33 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00363 9b06560daddab585848661e6ead22b0f 369 Gene3D G3DSA:2.40.110.10 127 223 1.6E-15 T 11-10-2018 AMC99_00363 9b06560daddab585848661e6ead22b0f 369 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.0E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00363 9b06560daddab585848661e6ead22b0f 369 Gene3D G3DSA:1.20.140.10 224 368 5.4E-30 T 11-10-2018 AMC99_00363 9b06560daddab585848661e6ead22b0f 369 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 363 6.7E-24 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00397 a5d2207a575e74ed7744752bb80fd890 162 Gene3D G3DSA:3.30.1330.40 26 155 7.9E-27 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMC99_00397 a5d2207a575e74ed7744752bb80fd890 162 Pfam PF01042 Endoribonuclease L-PSP 40 151 1.3E-18 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMC99_00397 a5d2207a575e74ed7744752bb80fd890 162 SUPERFAMILY SSF55298 39 154 1.56E-24 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMC99_01009 41b23ce0eaabaec7b8e68487b302123e 358 Pfam PF04332 Protein of unknown function (DUF475) 59 349 8.8E-107 T 11-10-2018 IPR007427 Protein of unknown function DUF475 AMC99_00882 bdcd06f131d9c39c10b90dd503ca6bed 581 SUPERFAMILY SSF48208 188 577 4.91E-85 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 AMC99_00882 bdcd06f131d9c39c10b90dd503ca6bed 581 Pfam PF00723 Glycosyl hydrolases family 15 205 520 3.2E-32 T 11-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 AMC99_00882 bdcd06f131d9c39c10b90dd503ca6bed 581 Gene3D G3DSA:1.50.10.10 203 578 6.8E-75 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 203.687 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 Pfam PF00709 Adenylosuccinate synthetase 5 421 4.2E-170 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 Gene3D G3DSA:1.10.300.10 101 199 1.5E-88 T 11-10-2018 AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 427 5.7E-155 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 SUPERFAMILY SSF52540 1 423 1.17E-165 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 SMART SM00788 3 422 4.1E-280 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 Gene3D G3DSA:3.40.440.10 6 256 1.5E-88 T 11-10-2018 AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 Gene3D G3DSA:3.90.170.10 265 429 5.5E-70 T 11-10-2018 AMC99_01803 1a05dc70b1eff189c5376cedef9c088a 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 Gene3D G3DSA:3.20.20.450 514 758 4.9E-99 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 SMART SM00304 284 335 1.5E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 Gene3D G3DSA:1.20.1480.50 247 337 3.4E-12 T 11-10-2018 AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 SMART SM00052 510 752 9.2E-119 T 11-10-2018 IPR001633 EAL domain AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 SMART SM00267 330 500 1.1E-44 T 11-10-2018 IPR000160 GGDEF domain AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 Pfam PF05228 CHASE4 domain 109 192 4.1E-6 T 11-10-2018 IPR007892 CHASE4 AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 SUPERFAMILY SSF141868 517 758 8.89E-91 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 Pfam PF00563 EAL domain 517 747 5.2E-77 T 11-10-2018 IPR001633 EAL domain AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 Pfam PF00990 Diguanylate cyclase, GGDEF domain 343 495 2.6E-35 T 11-10-2018 IPR000160 GGDEF domain AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 SUPERFAMILY SSF158472 284 332 2.88E-6 T 11-10-2018 AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 341 498 7.3E-35 T 11-10-2018 IPR000160 GGDEF domain AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 SUPERFAMILY SSF55073 346 502 2.59E-39 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 Pfam PF00672 HAMP domain 284 331 2.2E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMC99_02110 a4521fb93d25c2d8b8cac17e36b3efe3 769 Gene3D G3DSA:3.30.70.270 338 513 4.0E-50 T 11-10-2018 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 Gene3D G3DSA:1.10.287.610 102 152 3.3E-20 T 11-10-2018 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 SUPERFAMILY SSF52313 8 236 1.7E-88 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 226 40.282 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.8E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.8E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.8E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.8E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.8E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.8E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 Pfam PF00318 Ribosomal protein S2 11 225 8.1E-90 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 5 226 1.1E-97 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00684 50f86c917e7d207f28d829eba21f4cdd 249 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMC99_02058 63986703c72a90c2caed806296d5d840 235 SUPERFAMILY SSF55681 27 219 5.72E-63 T 11-10-2018 AMC99_02058 63986703c72a90c2caed806296d5d840 235 PIRSF PIRSF016262 16 233 3.1E-52 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMC99_02058 63986703c72a90c2caed806296d5d840 235 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 92 144 2.0E-19 T 11-10-2018 AMC99_02058 63986703c72a90c2caed806296d5d840 235 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 180 1.0E-10 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMC99_02058 63986703c72a90c2caed806296d5d840 235 Hamap MF_00013 Octanoyltransferase [lipB]. 21 227 32.704 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMC99_02058 63986703c72a90c2caed806296d5d840 235 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 52 202 1.5E-43 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AMC99_02058 63986703c72a90c2caed806296d5d840 235 Gene3D G3DSA:3.30.930.10 17 221 7.6E-63 T 11-10-2018 AMC99_02058 63986703c72a90c2caed806296d5d840 235 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 87 102 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AMC99_01219 895364f6202b01359a8d3a7cb16c5217 169 Pfam PF00011 Hsp20/alpha crystallin family 54 150 4.6E-16 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain AMC99_01219 895364f6202b01359a8d3a7cb16c5217 169 SUPERFAMILY SSF49764 17 151 2.51E-20 T 11-10-2018 IPR008978 HSP20-like chaperone AMC99_01219 895364f6202b01359a8d3a7cb16c5217 169 Gene3D G3DSA:2.60.40.790 45 150 2.4E-20 T 11-10-2018 IPR008978 HSP20-like chaperone AMC99_02506 7e27f727a1341a0c6d2f4abba347452e 612 Pfam PF00501 AMP-binding enzyme 29 481 5.2E-97 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_02506 7e27f727a1341a0c6d2f4abba347452e 612 SUPERFAMILY SSF56801 20 610 8.63E-122 T 11-10-2018 AMC99_02506 7e27f727a1341a0c6d2f4abba347452e 612 Gene3D G3DSA:3.40.50.12780 340 475 1.7E-38 T 11-10-2018 AMC99_02506 7e27f727a1341a0c6d2f4abba347452e 612 Gene3D G3DSA:3.40.50.12780 14 315 2.8E-54 T 11-10-2018 AMC99_02506 7e27f727a1341a0c6d2f4abba347452e 612 Gene3D G3DSA:3.30.300.30 476 606 1.6E-5 T 11-10-2018 AMC99_00986 6bc7821ca7361fd98d558951020a4d44 294 Pfam PF00274 Fructose-bisphosphate aldolase class-I 10 179 7.6E-12 T 11-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_00986 6bc7821ca7361fd98d558951020a4d44 294 Gene3D G3DSA:3.20.20.70 2 294 5.3E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00986 6bc7821ca7361fd98d558951020a4d44 294 SUPERFAMILY SSF51569 3 294 3.04E-89 T 11-10-2018 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 SMART SM01383 42 118 3.0E-41 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.7E-30 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 Gene3D G3DSA:2.40.50.140 1 114 2.3E-44 T 11-10-2018 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 43.182 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 7.0E-51 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 SUPERFAMILY SSF50249 2 123 1.17E-45 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 SUPERFAMILY SSF50104 126 272 2.35E-56 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 Gene3D G3DSA:4.10.950.10 197 274 2.8E-32 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.9E-116 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 SMART SM01382 124 252 1.5E-77 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 PIRSF PIRSF002158 3 275 9.8E-98 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01543 1ff681c30b78ce02924a4eba7ecbe95e 278 Gene3D G3DSA:2.30.30.30 118 196 2.6E-27 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AMC99_01855 7b2382917f17a875294c0b49c28b8ca8 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 157 262 1.6E-26 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMC99_01855 7b2382917f17a875294c0b49c28b8ca8 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 8 91 4.7E-6 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMC99_01855 7b2382917f17a875294c0b49c28b8ca8 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 262 21.651 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMC99_01855 7b2382917f17a875294c0b49c28b8ca8 270 SUPERFAMILY SSF51735 6 154 1.81E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01855 7b2382917f17a875294c0b49c28b8ca8 270 Gene3D G3DSA:1.10.3730.10 159 265 1.3E-28 T 11-10-2018 AMC99_01855 7b2382917f17a875294c0b49c28b8ca8 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 217 239 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMC99_01855 7b2382917f17a875294c0b49c28b8ca8 270 SUPERFAMILY SSF48179 156 264 1.04E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_01855 7b2382917f17a875294c0b49c28b8ca8 270 PIRSF PIRSF000193 4 265 4.1E-48 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 AMC99_01855 7b2382917f17a875294c0b49c28b8ca8 270 Gene3D G3DSA:3.40.50.720 4 158 1.0E-28 T 11-10-2018 AMC99_00248 3a853f4c47060124823760b3e9d6266d 342 SMART SM00862 26 101 6.8E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00248 3a853f4c47060124823760b3e9d6266d 342 Gene3D G3DSA:1.10.10.10 2 106 1.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00248 3a853f4c47060124823760b3e9d6266d 342 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 101 7.3E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00248 3a853f4c47060124823760b3e9d6266d 342 SUPERFAMILY SSF46894 4 103 1.67E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_00201 4b1e90ed3682c92c1b56159c0c8efc97 396 SUPERFAMILY SSF56024 21 214 1.5E-40 T 11-10-2018 AMC99_00201 4b1e90ed3682c92c1b56159c0c8efc97 396 SMART SM00155 297 323 1.2E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMC99_00201 4b1e90ed3682c92c1b56159c0c8efc97 396 SMART SM00155 122 149 1.1E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 AMC99_00201 4b1e90ed3682c92c1b56159c0c8efc97 396 Pfam PF13091 PLD-like domain 44 179 1.1E-16 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMC99_00201 4b1e90ed3682c92c1b56159c0c8efc97 396 Pfam PF13091 PLD-like domain 232 347 1.0E-18 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 AMC99_00201 4b1e90ed3682c92c1b56159c0c8efc97 396 SUPERFAMILY SSF56024 202 365 1.41E-24 T 11-10-2018 AMC99_00201 4b1e90ed3682c92c1b56159c0c8efc97 396 Gene3D G3DSA:3.30.870.10 24 209 8.2E-37 T 11-10-2018 AMC99_00201 4b1e90ed3682c92c1b56159c0c8efc97 396 Gene3D G3DSA:3.30.870.10 210 384 1.6E-20 T 11-10-2018 AMC99_01185 e54c15b94309a4773a0609a562415be4 252 SUPERFAMILY SSF101386 4 104 1.96E-23 T 11-10-2018 AMC99_01185 e54c15b94309a4773a0609a562415be4 252 Gene3D G3DSA:1.10.287.1080 129 252 2.5E-39 T 11-10-2018 AMC99_01185 e54c15b94309a4773a0609a562415be4 252 TIGRFAM TIGR00444 mazG: MazG family protein 11 249 4.3E-83 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG AMC99_01185 e54c15b94309a4773a0609a562415be4 252 SUPERFAMILY SSF101386 137 229 2.06E-20 T 11-10-2018 AMC99_01185 e54c15b94309a4773a0609a562415be4 252 Gene3D G3DSA:1.10.287.1080 1 125 1.5E-41 T 11-10-2018 AMC99_01185 e54c15b94309a4773a0609a562415be4 252 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 3.2E-27 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMC99_01185 e54c15b94309a4773a0609a562415be4 252 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 170 221 3.0E-4 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMC99_02402 bb88b2e60893e119854d53c15a4b5157 156 Gene3D G3DSA:3.40.30.10 4 155 4.1E-43 T 11-10-2018 AMC99_02402 bb88b2e60893e119854d53c15a4b5157 156 SUPERFAMILY SSF52833 4 154 5.35E-45 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02402 bb88b2e60893e119854d53c15a4b5157 156 PIRSF PIRSF000239 1 155 2.6E-21 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_02402 bb88b2e60893e119854d53c15a4b5157 156 Pfam PF00578 AhpC/TSA family 6 134 5.2E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_02518 3e5cd908892084068040dbc52d0be642 256 Pfam PF00149 Calcineurin-like phosphoesterase 9 199 2.6E-19 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMC99_02518 3e5cd908892084068040dbc52d0be642 256 SUPERFAMILY SSF56300 9 251 1.57E-43 T 11-10-2018 AMC99_02518 3e5cd908892084068040dbc52d0be642 256 Gene3D G3DSA:3.60.21.10 2 243 1.9E-31 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMC99_01117 0b9b84d321fdc6b2d67d39ba69b25dbb 224 Gene3D G3DSA:3.40.50.150 20 222 8.8E-11 T 11-10-2018 AMC99_01117 0b9b84d321fdc6b2d67d39ba69b25dbb 224 Pfam PF13489 Methyltransferase domain 66 150 8.4E-7 T 11-10-2018 AMC99_01117 0b9b84d321fdc6b2d67d39ba69b25dbb 224 SUPERFAMILY SSF53335 62 163 3.42E-11 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00379 461fec5c90522f6facfd0541fce18990 523 Pfam PF01593 Flavin containing amine oxidoreductase 38 513 1.2E-38 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMC99_00379 461fec5c90522f6facfd0541fce18990 523 Gene3D G3DSA:3.50.50.60 473 522 3.5E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00379 461fec5c90522f6facfd0541fce18990 523 Gene3D G3DSA:3.50.50.60 221 337 1.2E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00379 461fec5c90522f6facfd0541fce18990 523 Gene3D G3DSA:3.50.50.60 27 128 1.8E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00379 461fec5c90522f6facfd0541fce18990 523 SUPERFAMILY SSF51905 27 517 1.33E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00379 461fec5c90522f6facfd0541fce18990 523 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 30 520 1.4E-202 T 11-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 AMC99_00379 461fec5c90522f6facfd0541fce18990 523 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 485 505 - T 11-10-2018 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 Pfam PF01842 ACT domain 7 56 8.9E-9 T 11-10-2018 IPR002912 ACT domain AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 46.18 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 Gene3D G3DSA:3.30.70.260 1 84 1.3E-28 T 11-10-2018 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 PIRSF PIRSF036480 2 283 1.5E-104 T 11-10-2018 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 1.5E-98 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 SUPERFAMILY SSF55021 1 84 1.08E-19 T 11-10-2018 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 SUPERFAMILY SSF53328 87 283 3.53E-60 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 1.5E-48 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 1.5E-48 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 1.5E-48 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 1.5E-48 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 1.5E-48 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 1.5E-48 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 Pfam PF00551 Formyl transferase 87 264 7.8E-34 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_00017 21c612f7f0c88cc8bf37738293180456 284 Gene3D G3DSA:3.40.50.170 86 284 4.6E-73 T 11-10-2018 AMC99_02625 47538996c39b77b68c889b74a8b8e188 349 Gene3D G3DSA:3.40.710.10 3 346 6.0E-70 T 11-10-2018 AMC99_02625 47538996c39b77b68c889b74a8b8e188 349 Pfam PF00144 Beta-lactamase 38 330 7.2E-35 T 11-10-2018 IPR001466 Beta-lactamase-related AMC99_02625 47538996c39b77b68c889b74a8b8e188 349 SUPERFAMILY SSF56601 18 343 2.33E-70 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_00649 bfcb84f19850237aee16a8ec6b5f0256 137 Pfam PF11351 Holin of 3TMs, for gene-transfer release 6 128 3.2E-29 T 11-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release AMC99_02397 5502833393f2e820fae6022a87f6978c 293 SUPERFAMILY SSF53448 8 281 9.91E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_02397 5502833393f2e820fae6022a87f6978c 293 Pfam PF00483 Nucleotidyl transferase 14 273 1.2E-24 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMC99_02397 5502833393f2e820fae6022a87f6978c 293 Gene3D G3DSA:3.90.550.10 1 293 9.4E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_02397 5502833393f2e820fae6022a87f6978c 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 269 1.6E-99 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 AMC99_02541 733c8bf947d133c3e35e7acdfcd82c9c 282 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 266 56.905 T 11-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein AMC99_02541 733c8bf947d133c3e35e7acdfcd82c9c 282 Pfam PF03618 Kinase/pyrophosphorylase 6 259 1.8E-93 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AMC99_01073 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 PIRSF PIRSF000412 3 434 4.5E-166 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMC99_01073 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMC99_01073 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 432 52.226 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMC99_01073 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 SUPERFAMILY SSF53383 13 432 4.7E-176 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01073 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 Gene3D G3DSA:3.90.1150.10 20 404 1.2E-179 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_01073 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 Pfam PF00464 Serine hydroxymethyltransferase 18 395 7.9E-175 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AMC99_01073 6d74aff0ba3a7d0af8bd4d5bf47093a4 434 Gene3D G3DSA:3.40.640.10 47 298 1.2E-179 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_00112 3306a72a0708b3cdaa4ca8353f67b08b 427 Gene3D G3DSA:3.30.565.10 279 425 5.1E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00112 3306a72a0708b3cdaa4ca8353f67b08b 427 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 422 3.1E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_00112 3306a72a0708b3cdaa4ca8353f67b08b 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 6.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00112 3306a72a0708b3cdaa4ca8353f67b08b 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 6.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00112 3306a72a0708b3cdaa4ca8353f67b08b 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 6.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_00112 3306a72a0708b3cdaa4ca8353f67b08b 427 SUPERFAMILY SSF47384 200 273 6.87E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_00112 3306a72a0708b3cdaa4ca8353f67b08b 427 SMART SM00387 323 426 1.9E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_00112 3306a72a0708b3cdaa4ca8353f67b08b 427 Gene3D G3DSA:1.10.287.130 163 277 9.3E-9 T 11-10-2018 AMC99_00112 3306a72a0708b3cdaa4ca8353f67b08b 427 SUPERFAMILY SSF55874 283 422 7.6E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01308 934f31fecc8643f24677a66777466ebc 463 Gene3D G3DSA:3.40.50.10260 2 204 8.3E-44 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AMC99_01308 934f31fecc8643f24677a66777466ebc 463 SUPERFAMILY SSF53613 217 454 6.08E-45 T 11-10-2018 IPR029056 Ribokinase-like AMC99_01308 934f31fecc8643f24677a66777466ebc 463 SUPERFAMILY SSF64153 6 228 1.14E-47 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AMC99_01308 934f31fecc8643f24677a66777466ebc 463 Gene3D G3DSA:3.40.1190.20 211 461 9.1E-57 T 11-10-2018 IPR029056 Ribokinase-like AMC99_01308 934f31fecc8643f24677a66777466ebc 463 Pfam PF01256 Carbohydrate kinase 232 455 4.0E-38 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMC99_01308 934f31fecc8643f24677a66777466ebc 463 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 219 447 1.0E-42 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMC99_01308 934f31fecc8643f24677a66777466ebc 463 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 8 201 18.555 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMC99_01308 934f31fecc8643f24677a66777466ebc 463 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 207 460 15.267 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AMC99_01308 934f31fecc8643f24677a66777466ebc 463 Pfam PF03853 YjeF-related protein N-terminus 27 178 1.2E-29 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMC99_01308 934f31fecc8643f24677a66777466ebc 463 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 7 200 5.1E-31 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMC99_01308 934f31fecc8643f24677a66777466ebc 463 PIRSF PIRSF017184 4 463 1.3E-80 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AMC99_01308 934f31fecc8643f24677a66777466ebc 463 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 289 299 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site AMC99_01267 0f4eb381bf39671b49a6cff3aa8dbb29 338 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 126 302 1.0E-61 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMC99_01267 0f4eb381bf39671b49a6cff3aa8dbb29 338 Gene3D G3DSA:3.40.50.720 17 329 1.1E-109 T 11-10-2018 AMC99_01267 0f4eb381bf39671b49a6cff3aa8dbb29 338 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 333 2.5E-28 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 AMC99_01267 0f4eb381bf39671b49a6cff3aa8dbb29 338 SUPERFAMILY SSF51735 115 303 2.25E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01267 0f4eb381bf39671b49a6cff3aa8dbb29 338 Gene3D G3DSA:3.40.50.720 112 302 1.1E-109 T 11-10-2018 AMC99_01267 0f4eb381bf39671b49a6cff3aa8dbb29 338 SUPERFAMILY SSF52283 16 149 8.13E-36 T 11-10-2018 AMC99_01267 0f4eb381bf39671b49a6cff3aa8dbb29 338 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 213 235 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 SUPERFAMILY SSF55681 13 291 1.39E-70 T 11-10-2018 AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 Gene3D G3DSA:3.30.110.30 434 514 3.8E-7 T 11-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 10 514 4.3E-135 T 11-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 SMART SM00946 440 514 1.4E-11 T 11-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 Pfam PF03129 Anticodon binding domain 304 387 9.5E-10 T 11-10-2018 IPR004154 Anticodon-binding AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 118 284 1.7E-11 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 SUPERFAMILY SSF64586 437 514 1.0E-9 T 11-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 SUPERFAMILY SSF52954 293 430 9.65E-22 T 11-10-2018 AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 Gene3D G3DSA:3.30.930.10 5 297 5.0E-97 T 11-10-2018 AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 Gene3D G3DSA:3.40.50.800 298 430 2.6E-21 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AMC99_01168 f921c32bcda062f7dc0e645e09a9d4da 514 Hamap MF_01571 Proline--tRNA ligase [proS]. 9 514 39.648 T 11-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 AMC99_02635 e7dfffbcda5549cf7b7d1e8cc8511919 212 SUPERFAMILY SSF88946 31 105 6.54E-7 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_02635 e7dfffbcda5549cf7b7d1e8cc8511919 212 Pfam PF04542 Sigma-70 region 2 38 94 2.2E-6 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_02104 7c9128b2b6e6cdab6c6dbc9cb76cec7a 120 SUPERFAMILY SSF52172 1 120 1.11E-33 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02104 7c9128b2b6e6cdab6c6dbc9cb76cec7a 120 Gene3D G3DSA:3.40.50.12740 1 120 2.8E-34 T 11-10-2018 AMC99_02104 7c9128b2b6e6cdab6c6dbc9cb76cec7a 120 Pfam PF00072 Response regulator receiver domain 3 115 6.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02104 7c9128b2b6e6cdab6c6dbc9cb76cec7a 120 SMART SM00448 1 115 2.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 Gene3D G3DSA:1.10.630.10 19 466 2.1E-110 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 SUPERFAMILY SSF48264 26 465 4.32E-107 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 374 392 1.7E-17 T 11-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 50 73 1.7E-17 T 11-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 398 414 1.7E-17 T 11-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 414 432 1.7E-17 T 11-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00465 E-class P450 group IV signature 325 341 1.7E-17 T 11-10-2018 IPR002403 Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00385 P450 superfamily signature 330 341 1.6E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00385 P450 superfamily signature 271 288 1.6E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00385 P450 superfamily signature 405 414 1.6E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 PRINTS PR00385 P450 superfamily signature 414 425 1.6E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 Pfam PF00067 Cytochrome P450 30 446 7.7E-66 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02233 7b97f01f54e587f860216244d575e99e 466 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 407 416 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMC99_02458 72168a8ba48eb7b80c3464625d04435c 520 SUPERFAMILY SSF51905 11 433 1.64E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02458 72168a8ba48eb7b80c3464625d04435c 520 Gene3D G3DSA:3.50.50.60 6 508 6.2E-175 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02458 72168a8ba48eb7b80c3464625d04435c 520 Pfam PF04820 Tryptophan halogenase 13 463 7.8E-121 T 11-10-2018 IPR006905 Flavin-dependent halogenase AMC99_02458 72168a8ba48eb7b80c3464625d04435c 520 PIRSF PIRSF011396 4 510 1.4E-150 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AMC99_00486 4daa6911bb6926d19427c5c4e86d6c03 258 SUPERFAMILY SSF56529 4 257 3.32E-39 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMC99_00486 4daa6911bb6926d19427c5c4e86d6c03 258 Gene3D G3DSA:3.90.850.10 2 256 3.5E-57 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 Gene3D G3DSA:3.30.300.20 376 459 1.5E-27 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 SUPERFAMILY SSF52540 142 462 3.65E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 Gene3D G3DSA:3.40.50.300 191 373 7.5E-44 T 11-10-2018 AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 SUPERFAMILY SSF52540 7 167 3.2E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 Gene3D G3DSA:3.40.50.300 4 164 1.0E-42 T 11-10-2018 AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 Hamap MF_00195 GTPase Der [der]. 6 459 36.196 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 376 456 9.7E-29 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 7 456 5.1E-158 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 193 363 3.5E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 129 6.6E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 Pfam PF01926 50S ribosome-binding GTPase 195 318 6.8E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 Pfam PF01926 50S ribosome-binding GTPase 8 124 2.9E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_02008 459bd9a004c702407862e89c3bd23b8d 466 PIRSF PIRSF006485 5 464 7.7E-154 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AMC99_01393 6223e158f057f9b8d5b9a49bcd9d9d2e 178 SUPERFAMILY SSF55729 24 161 6.18E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01393 6223e158f057f9b8d5b9a49bcd9d9d2e 178 Pfam PF00583 Acetyltransferase (GNAT) family 59 157 2.1E-8 T 11-10-2018 IPR000182 GNAT domain AMC99_01393 6223e158f057f9b8d5b9a49bcd9d9d2e 178 Gene3D G3DSA:3.40.630.30 14 172 6.8E-29 T 11-10-2018 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 SUPERFAMILY SSF48163 291 446 6.15E-29 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 Gene3D G3DSA:3.40.50.620 1 322 9.3E-102 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 338 3.8E-94 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 SUPERFAMILY SSF52374 1 306 1.18E-91 T 11-10-2018 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.3E-19 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 1.3E-19 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 1.3E-19 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 1.3E-19 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 447 25.625 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 313 1.8E-70 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMC99_02811 d04b3a18324ad54f43ddb474c38a78fa 449 Gene3D G3DSA:1.10.10.350 367 447 7.0E-15 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_00378 c5ede687f913cb55041958f1139ff45b 193 Gene3D G3DSA:3.40.50.450 1 190 2.9E-70 T 11-10-2018 AMC99_00378 c5ede687f913cb55041958f1139ff45b 193 Pfam PF03641 Possible lysine decarboxylase 46 176 2.1E-39 T 11-10-2018 IPR031100 LOG family AMC99_00378 c5ede687f913cb55041958f1139ff45b 193 SUPERFAMILY SSF102405 2 179 5.95E-58 T 11-10-2018 AMC99_00378 c5ede687f913cb55041958f1139ff45b 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 179 2.1E-56 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 1.1E-17 T 11-10-2018 AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 SUPERFAMILY SSF46785 3 64 4.01E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.0E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.0E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.0E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 Gene3D G3DSA:1.10.10.10 1 57 1.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 SUPERFAMILY SSF54909 64 153 3.08E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 Gene3D G3DSA:3.30.70.920 58 141 3.6E-25 T 11-10-2018 AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 SMART SM00344 4 113 3.3E-45 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 5.4E-21 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMC99_00642 af4d84c2a70fd2c325260a333962a2d4 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMC99_00551 6bee95d04be31debf72068595a2efac8 763 Gene3D G3DSA:3.40.710.10 342 677 4.1E-87 T 11-10-2018 AMC99_00551 6bee95d04be31debf72068595a2efac8 763 Gene3D G3DSA:1.10.3810.10 134 327 7.5E-66 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_00551 6bee95d04be31debf72068595a2efac8 763 Pfam PF00905 Penicillin binding protein transpeptidase domain 394 631 5.4E-23 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_00551 6bee95d04be31debf72068595a2efac8 763 SUPERFAMILY SSF56601 295 672 4.13E-95 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_00551 6bee95d04be31debf72068595a2efac8 763 Pfam PF00912 Transglycosylase 142 313 1.4E-58 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_00551 6bee95d04be31debf72068595a2efac8 763 SUPERFAMILY SSF53955 131 334 2.5E-68 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMC99_02339 de16fa17883d128d81748ddc75882fad 207 ProSitePatterns PS00018 EF-hand calcium-binding domain. 173 185 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMC99_02339 de16fa17883d128d81748ddc75882fad 207 Gene3D G3DSA:1.10.238.10 45 106 2.3E-8 T 11-10-2018 AMC99_02339 de16fa17883d128d81748ddc75882fad 207 Gene3D G3DSA:1.10.238.10 135 198 1.8E-9 T 11-10-2018 AMC99_02339 de16fa17883d128d81748ddc75882fad 207 SUPERFAMILY SSF47473 32 163 1.88E-12 T 11-10-2018 IPR011992 EF-hand domain pair AMC99_02339 de16fa17883d128d81748ddc75882fad 207 ProSitePatterns PS00018 EF-hand calcium-binding domain. 81 93 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMC99_02339 de16fa17883d128d81748ddc75882fad 207 Pfam PF13202 EF hand 168 185 1.4E-4 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AMC99_02339 de16fa17883d128d81748ddc75882fad 207 Pfam PF13202 EF hand 77 93 0.043 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AMC99_02339 de16fa17883d128d81748ddc75882fad 207 Pfam PF13202 EF hand 51 65 0.054 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AMC99_02096 3c750630a60131cd60961d05366852b2 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_02096 3c750630a60131cd60961d05366852b2 245 SUPERFAMILY SSF51735 5 244 8.11E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02096 3c750630a60131cd60961d05366852b2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.8E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02096 3c750630a60131cd60961d05366852b2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.8E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02096 3c750630a60131cd60961d05366852b2 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.8E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02096 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.7E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02096 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.7E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02096 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.7E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02096 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.7E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02096 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.7E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02096 3c750630a60131cd60961d05366852b2 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.7E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02096 3c750630a60131cd60961d05366852b2 245 Gene3D G3DSA:3.40.50.720 1 245 1.6E-64 T 11-10-2018 AMC99_02096 3c750630a60131cd60961d05366852b2 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 244 6.8E-51 T 11-10-2018 AMC99_02476 12e83d43d2bf805587724550fb9edd1f 235 Gene3D G3DSA:3.90.730.10 43 231 3.2E-22 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AMC99_02476 12e83d43d2bf805587724550fb9edd1f 235 SUPERFAMILY SSF55895 50 219 1.7E-30 T 11-10-2018 IPR036430 Ribonuclease T2-like superfamily GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AMC99_02476 12e83d43d2bf805587724550fb9edd1f 235 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 85 92 - T 11-10-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AMC99_02476 12e83d43d2bf805587724550fb9edd1f 235 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 125 136 - T 11-10-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 AMC99_02476 12e83d43d2bf805587724550fb9edd1f 235 Pfam PF00445 Ribonuclease T2 family 54 178 1.9E-8 T 11-10-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 AMC99_00094 896f62a2d1256d9cab636198f220d416 186 Gene3D G3DSA:1.10.1740.10 4 92 1.5E-19 T 11-10-2018 AMC99_00094 896f62a2d1256d9cab636198f220d416 186 SUPERFAMILY SSF88659 121 183 2.62E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMC99_00094 896f62a2d1256d9cab636198f220d416 186 Pfam PF04542 Sigma-70 region 2 27 92 5.9E-14 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_00094 896f62a2d1256d9cab636198f220d416 186 Pfam PF08281 Sigma-70, region 4 130 179 8.0E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMC99_00094 896f62a2d1256d9cab636198f220d416 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 182 4.0E-23 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AMC99_00094 896f62a2d1256d9cab636198f220d416 186 Gene3D G3DSA:1.10.10.10 109 184 3.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00094 896f62a2d1256d9cab636198f220d416 186 SUPERFAMILY SSF88946 5 111 1.29E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AMC99_02547 d78e61decc18c825a4b20a025a387784 529 SUPERFAMILY SSF51395 19 495 2.93E-122 T 11-10-2018 AMC99_02547 d78e61decc18c825a4b20a025a387784 529 PIRSF PIRSF006429 12 525 8.3E-144 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein AMC99_02547 d78e61decc18c825a4b20a025a387784 529 Pfam PF01645 Conserved region in glutamate synthase 153 469 4.6E-82 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 AMC99_02547 d78e61decc18c825a4b20a025a387784 529 Gene3D G3DSA:3.20.20.70 139 495 3.7E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02547 d78e61decc18c825a4b20a025a387784 529 PIRSF PIRSF500060 7 525 2.5E-203 T 11-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria AMC99_01647 0242d68692f5be301b956ab81ffe8677 225 Gene3D G3DSA:3.40.109.10 2 218 2.2E-62 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMC99_01647 0242d68692f5be301b956ab81ffe8677 225 Pfam PF00881 Nitroreductase family 8 197 4.6E-33 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMC99_01647 0242d68692f5be301b956ab81ffe8677 225 SUPERFAMILY SSF55469 2 220 2.88E-44 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 SMART SM00662 28 235 6.2E-92 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 SUPERFAMILY SSF55257 8 232 2.98E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 29 329 1.2E-114 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 Gene3D G3DSA:1.10.150.20 257 341 7.0E-37 T 11-10-2018 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 Gene3D G3DSA:3.30.1360.10 25 229 5.7E-85 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 SUPERFAMILY SSF47789 262 338 5.49E-27 T 11-10-2018 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 159 1.2E-22 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 8 329 36.048 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 34 229 1.0E-22 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 258 320 2.5E-25 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 SUPERFAMILY SSF56553 58 179 1.96E-40 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 Gene3D G3DSA:2.170.120.12 58 178 5.7E-85 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01520 e25c19e76a8d48e70605e269dfe3275f 351 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 269 340 7.0E-36 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_01767 6f97b2f06cd261b0ebc50db8ab914501 179 SUPERFAMILY SSF52317 1 172 1.58E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01767 6f97b2f06cd261b0ebc50db8ab914501 179 Gene3D G3DSA:3.40.50.880 1 177 2.6E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_01767 6f97b2f06cd261b0ebc50db8ab914501 179 Pfam PF01965 DJ-1/PfpI family 3 169 2.9E-54 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 AMC99_01767 6f97b2f06cd261b0ebc50db8ab914501 179 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 1.6E-51 T 11-10-2018 IPR006286 Deglycase PfpI AMC99_00557 4e16ae408aad74ac34470047a30acd59 161 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 25 153 1.3E-33 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMC99_00557 4e16ae408aad74ac34470047a30acd59 161 Gene3D G3DSA:3.30.420.140 22 160 4.3E-40 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AMC99_00557 4e16ae408aad74ac34470047a30acd59 161 SUPERFAMILY SSF53098 23 155 3.79E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMC99_00557 4e16ae408aad74ac34470047a30acd59 161 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 22 157 21.67 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMC99_00557 4e16ae408aad74ac34470047a30acd59 161 Pfam PF03652 Holliday junction resolvase 24 154 3.9E-37 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMC99_00557 4e16ae408aad74ac34470047a30acd59 161 SMART SM00732 22 122 5.1E-27 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AMC99_00255 05828df05839af5e6833d42898801511 189 SUPERFAMILY SSF160443 95 186 1.83E-9 T 11-10-2018 IPR036063 Smr domain superfamily AMC99_00255 05828df05839af5e6833d42898801511 189 Gene3D G3DSA:3.30.1370.110 66 189 8.5E-28 T 11-10-2018 AMC99_00255 05828df05839af5e6833d42898801511 189 Pfam PF01713 Smr domain 97 186 2.5E-16 T 11-10-2018 IPR002625 Smr domain AMC99_00321 ae5ad837f92dd4489776eb512247ae2e 263 Pfam PF09361 Phasin protein 155 252 1.1E-18 T 11-10-2018 IPR018968 Phasin AMC99_00321 ae5ad837f92dd4489776eb512247ae2e 263 TIGRFAM TIGR01841 phasin: phasin family protein 174 259 5.4E-12 T 11-10-2018 IPR010127 Phasin, subfamily 1 AMC99_01198 5f42b9027feb105ece60ef66366f409e 235 Gene3D G3DSA:1.10.10.1880 167 235 1.3E-14 T 11-10-2018 AMC99_01198 5f42b9027feb105ece60ef66366f409e 235 Pfam PF12872 OST-HTH/LOTUS domain 161 231 2.3E-11 T 11-10-2018 IPR025605 OST-HTH/LOTUS domain AMC99_01198 5f42b9027feb105ece60ef66366f409e 235 Gene3D G3DSA:3.40.50.1010 3 146 7.3E-14 T 11-10-2018 AMC99_01198 5f42b9027feb105ece60ef66366f409e 235 Pfam PF01936 NYN domain 9 142 1.7E-31 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type AMC99_00437 4c01fe677c7cdd8fda54794b456d7d9e 131 PIRSF PIRSF003230 1 130 1.6E-41 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMC99_00437 4c01fe677c7cdd8fda54794b456d7d9e 131 Pfam PF03061 Thioesterase superfamily 12 96 7.3E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_00437 4c01fe677c7cdd8fda54794b456d7d9e 131 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 1 102 5.9E-23 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMC99_00437 4c01fe677c7cdd8fda54794b456d7d9e 131 Gene3D G3DSA:3.10.129.10 1 130 4.4E-37 T 11-10-2018 AMC99_00437 4c01fe677c7cdd8fda54794b456d7d9e 131 SUPERFAMILY SSF54637 1 124 1.53E-35 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 Pfam PF13185 GAF domain 11 141 2.6E-12 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 Gene3D G3DSA:3.30.450.40 1 151 6.0E-35 T 11-10-2018 IPR029016 GAF-like domain superfamily AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 SUPERFAMILY SSF55781 6 149 6.11E-23 T 11-10-2018 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 Gene3D G3DSA:3.50.30.10 167 392 9.3E-49 T 11-10-2018 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 Pfam PF05524 PEP-utilising enzyme, N-terminal 167 285 3.0E-22 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 SMART SM00065 6 151 1.9E-15 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 Pfam PF00391 PEP-utilising enzyme, mobile domain 314 383 4.5E-14 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 SUPERFAMILY SSF47831 182 302 1.7E-26 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 166 719 4.8E-115 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 Gene3D G3DSA:3.20.20.60 393 734 1.5E-83 T 11-10-2018 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 Gene3D G3DSA:1.10.274.10 183 306 9.3E-49 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 SUPERFAMILY SSF52009 284 404 1.03E-22 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 453 472 9.8E-16 T 11-10-2018 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 627 642 9.8E-16 T 11-10-2018 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 663 675 9.8E-16 T 11-10-2018 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 610 625 9.8E-16 T 11-10-2018 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 414 704 9.3E-79 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 610 628 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMC99_02043 48c9c5ed423791f9cb1fc3012a39e08d 739 SUPERFAMILY SSF51621 410 711 6.98E-82 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMC99_02248 5a31b1bc4d0bd949112139320f3c859c 394 SUPERFAMILY SSF53383 52 388 1.51E-76 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_02248 5a31b1bc4d0bd949112139320f3c859c 394 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 34 390 54.114 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMC99_02248 5a31b1bc4d0bd949112139320f3c859c 394 Gene3D G3DSA:3.40.640.10 70 293 2.1E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_02248 5a31b1bc4d0bd949112139320f3c859c 394 Gene3D G3DSA:3.90.1150.10 41 382 2.1E-101 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_02248 5a31b1bc4d0bd949112139320f3c859c 394 Pfam PF00155 Aminotransferase class I and II 57 384 1.6E-52 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMC99_02248 5a31b1bc4d0bd949112139320f3c859c 394 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 39 388 3.3E-85 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 Gene3D G3DSA:3.30.160.40 225 306 2.7E-13 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 235 251 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 SUPERFAMILY SSF53850 10 223 9.77E-64 T 11-10-2018 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 11 286 4.8E-89 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 Gene3D G3DSA:3.40.190.10 11 214 1.5E-67 T 11-10-2018 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 11 217 5.9E-67 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 10 300 31.384 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 PIRSF PIRSF001438 1 311 1.7E-99 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 Gene3D G3DSA:3.40.190.10 110 206 1.5E-67 T 11-10-2018 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 PRINTS PR00151 Porphobilinogen deaminase signature 148 165 2.3E-34 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 PRINTS PR00151 Porphobilinogen deaminase signature 234 251 2.3E-34 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 PRINTS PR00151 Porphobilinogen deaminase signature 83 102 2.3E-34 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 PRINTS PR00151 Porphobilinogen deaminase signature 52 72 2.3E-34 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 PRINTS PR00151 Porphobilinogen deaminase signature 129 146 2.3E-34 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 231 288 2.9E-11 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00816 ec6a130c1ca206ce2159a6addf048e7c 314 SUPERFAMILY SSF54782 224 297 6.67E-15 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_01274 f6134a12af820a05c59fb6aa4552e175 178 SUPERFAMILY SSF52833 23 175 1.63E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01274 f6134a12af820a05c59fb6aa4552e175 178 Gene3D G3DSA:3.40.30.10 19 177 5.6E-28 T 11-10-2018 AMC99_01274 f6134a12af820a05c59fb6aa4552e175 178 Pfam PF00578 AhpC/TSA family 25 153 1.8E-20 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_01811 07e7e22aa7d8a5a0dd03d470a7d186ea 385 Gene3D G3DSA:3.40.640.10 26 264 7.9E-35 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_01811 07e7e22aa7d8a5a0dd03d470a7d186ea 385 Gene3D G3DSA:3.90.1150.10 267 382 2.7E-14 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_01811 07e7e22aa7d8a5a0dd03d470a7d186ea 385 Pfam PF00266 Aminotransferase class-V 75 314 1.4E-5 T 11-10-2018 IPR000192 Aminotransferase class V domain AMC99_01811 07e7e22aa7d8a5a0dd03d470a7d186ea 385 SUPERFAMILY SSF53383 12 381 4.89E-69 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01811 07e7e22aa7d8a5a0dd03d470a7d186ea 385 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 8 381 2.0E-161 T 11-10-2018 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 AMC99_01811 07e7e22aa7d8a5a0dd03d470a7d186ea 385 PIRSF PIRSF000525 10 383 3.2E-46 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 AMC99_01070 d9ef749877130e54ad7891506d22bc6f 237 SUPERFAMILY SSF75217 1 166 9.16E-32 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMC99_01070 d9ef749877130e54ad7891506d22bc6f 237 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 229 1.4E-52 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AMC99_01070 d9ef749877130e54ad7891506d22bc6f 237 Gene3D G3DSA:1.10.8.590 159 236 1.3E-8 T 11-10-2018 AMC99_01070 d9ef749877130e54ad7891506d22bc6f 237 Gene3D G3DSA:3.40.1280.10 1 158 2.6E-49 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_01070 d9ef749877130e54ad7891506d22bc6f 237 PIRSF PIRSF004808 1 234 1.7E-69 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 AMC99_01070 d9ef749877130e54ad7891506d22bc6f 237 Pfam PF00588 SpoU rRNA Methylase family 1 148 1.5E-27 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMC99_02533 1688cd55a9322758efbe3fee398a3165 111 Pfam PF07372 Protein of unknown function (DUF1491) 5 106 4.5E-27 T 11-10-2018 IPR009964 Protein of unknown function DUF1491 AMC99_02533 1688cd55a9322758efbe3fee398a3165 111 Gene3D G3DSA:3.40.1530.20 2 109 7.7E-30 T 11-10-2018 AMC99_02348 0b2a99088e556380b869b5b7c46b57a8 477 Gene3D G3DSA:3.40.720.10 24 477 4.5E-160 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AMC99_02348 0b2a99088e556380b869b5b7c46b57a8 477 Pfam PF00245 Alkaline phosphatase 44 474 3.1E-114 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_02348 0b2a99088e556380b869b5b7c46b57a8 477 SMART SM00098 45 476 4.7E-145 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_02348 0b2a99088e556380b869b5b7c46b57a8 477 SUPERFAMILY SSF53649 36 476 3.33E-136 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AMC99_02348 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 147 167 1.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_02348 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 284 313 1.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_02348 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 100 115 1.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_02348 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 205 215 1.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_02348 0b2a99088e556380b869b5b7c46b57a8 477 PRINTS PR00113 Alkaline phosphatase signature 44 64 1.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 AMC99_00602 33a6688d71be3605ef73d197b01ac073 251 Pfam PF04452 RNA methyltransferase 27 241 7.7E-54 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMC99_00602 33a6688d71be3605ef73d197b01ac073 251 SUPERFAMILY SSF75217 82 247 5.23E-44 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMC99_00602 33a6688d71be3605ef73d197b01ac073 251 Gene3D G3DSA:2.40.240.20 13 81 9.2E-20 T 11-10-2018 AMC99_00602 33a6688d71be3605ef73d197b01ac073 251 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 16 243 7.0E-38 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMC99_00602 33a6688d71be3605ef73d197b01ac073 251 SUPERFAMILY SSF88697 12 79 1.62E-14 T 11-10-2018 IPR015947 PUA-like superfamily AMC99_00602 33a6688d71be3605ef73d197b01ac073 251 PIRSF PIRSF015601 11 247 1.2E-58 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AMC99_00602 33a6688d71be3605ef73d197b01ac073 251 Gene3D G3DSA:3.40.1280.10 84 248 2.8E-48 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_01334 3ac7fe93b6a31f06d1a8fd99672199c9 295 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 3 162 9.2E-26 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase AMC99_00817 38269d949876f3732c435e295350f7bd 225 Gene3D G3DSA:3.40.50.10090 2 115 7.4E-12 T 11-10-2018 AMC99_00817 38269d949876f3732c435e295350f7bd 225 Gene3D G3DSA:3.40.50.10090 123 222 3.9E-7 T 11-10-2018 AMC99_00817 38269d949876f3732c435e295350f7bd 225 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 215 1.1E-14 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00817 38269d949876f3732c435e295350f7bd 225 SUPERFAMILY SSF69618 4 224 1.57E-24 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AMC99_00765 1031667d32d2d7d4e828c5bae13affb5 220 Pfam PF00578 AhpC/TSA family 16 145 1.0E-30 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_00765 1031667d32d2d7d4e828c5bae13affb5 220 Gene3D G3DSA:3.40.30.10 10 204 3.9E-57 T 11-10-2018 AMC99_00765 1031667d32d2d7d4e828c5bae13affb5 220 SUPERFAMILY SSF52833 13 204 2.29E-57 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00765 1031667d32d2d7d4e828c5bae13affb5 220 PIRSF PIRSF000239 10 215 1.1E-67 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_00430 d8f8cac936c4849310171d2fb1328852 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMC99_00430 d8f8cac936c4849310171d2fb1328852 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 1.4E-63 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMC99_00430 d8f8cac936c4849310171d2fb1328852 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMC99_00430 d8f8cac936c4849310171d2fb1328852 197 SUPERFAMILY SSF54211 87 179 7.84E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_00430 d8f8cac936c4849310171d2fb1328852 197 SUPERFAMILY SSF54211 1 85 1.77E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_00430 d8f8cac936c4849310171d2fb1328852 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 41.472 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 AMC99_00430 d8f8cac936c4849310171d2fb1328852 197 Gene3D G3DSA:3.30.230.40 1 89 1.3E-35 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AMC99_00430 d8f8cac936c4849310171d2fb1328852 197 Gene3D G3DSA:3.30.230.40 90 196 1.1E-37 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 AMC99_00759 5ee28cd63ae330f47414fb3571c9ad2b 425 Gene3D G3DSA:3.50.50.100 2 417 3.1E-142 T 11-10-2018 AMC99_00759 5ee28cd63ae330f47414fb3571c9ad2b 425 SUPERFAMILY SSF51905 5 312 1.12E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00759 5ee28cd63ae330f47414fb3571c9ad2b 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 310 1.4E-15 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_00759 5ee28cd63ae330f47414fb3571c9ad2b 425 SUPERFAMILY SSF51905 138 244 3.8E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01392 2b70160c59e5820220a0626e7fea9205 208 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 6.8E-36 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01392 2b70160c59e5820220a0626e7fea9205 208 SUPERFAMILY SSF55653 56 147 3.27E-24 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMC99_01392 2b70160c59e5820220a0626e7fea9205 208 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01392 2b70160c59e5820220a0626e7fea9205 208 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 6.9E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01392 2b70160c59e5820220a0626e7fea9205 208 SUPERFAMILY SSF55658 1 57 9.77E-18 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMC99_01392 2b70160c59e5820220a0626e7fea9205 208 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 23.713 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01392 2b70160c59e5820220a0626e7fea9205 208 Gene3D G3DSA:3.10.430.100 60 148 1.1E-21 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMC99_01392 2b70160c59e5820220a0626e7fea9205 208 Gene3D G3DSA:3.40.5.10 1 50 1.0E-21 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01392 2b70160c59e5820220a0626e7fea9205 208 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 5.8E-22 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.0E-83 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.0E-83 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 1.0E-83 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.0E-83 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 1.0E-83 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.0E-83 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.0E-83 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 1.0E-83 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 Pfam PF00815 Histidinol dehydrogenase 23 428 6.9E-165 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 40.903 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 Gene3D G3DSA:3.40.50.1980 234 350 3.0E-122 T 11-10-2018 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 SUPERFAMILY SSF53720 14 428 4.9E-87 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 PIRSF PIRSF000099 3 429 4.2E-158 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 3.6E-157 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 Gene3D G3DSA:3.40.50.1980 31 232 3.0E-122 T 11-10-2018 AMC99_00536 1b2dc2b2d0358fff38b8e9133c7600ae 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 AMC99_02660 af1caa9d8431c36fd8c3163e2af0967c 307 SUPERFAMILY SSF103481 198 301 2.48E-7 T 11-10-2018 AMC99_02660 af1caa9d8431c36fd8c3163e2af0967c 307 SUPERFAMILY SSF103481 48 150 4.32E-14 T 11-10-2018 AMC99_02660 af1caa9d8431c36fd8c3163e2af0967c 307 Pfam PF00892 EamA-like transporter family 19 147 1.9E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_02660 af1caa9d8431c36fd8c3163e2af0967c 307 Pfam PF00892 EamA-like transporter family 162 298 5.3E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_01047 c5dc217fbb228d603f1e24c8b48e95d5 171 SUPERFAMILY SSF55021 89 169 4.35E-25 T 11-10-2018 AMC99_01047 c5dc217fbb228d603f1e24c8b48e95d5 171 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 10 85 7.0E-33 T 11-10-2018 AMC99_01047 c5dc217fbb228d603f1e24c8b48e95d5 171 SUPERFAMILY SSF55021 10 85 3.05E-17 T 11-10-2018 AMC99_01047 c5dc217fbb228d603f1e24c8b48e95d5 171 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 10 167 4.8E-53 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMC99_01047 c5dc217fbb228d603f1e24c8b48e95d5 171 Gene3D G3DSA:3.30.70.260 7 88 6.6E-30 T 11-10-2018 AMC99_01047 c5dc217fbb228d603f1e24c8b48e95d5 171 Gene3D G3DSA:3.30.70.1150 89 166 3.1E-25 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AMC99_01047 c5dc217fbb228d603f1e24c8b48e95d5 171 Pfam PF10369 Small subunit of acetolactate synthase 94 167 1.7E-24 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMC99_01047 c5dc217fbb228d603f1e24c8b48e95d5 171 Pfam PF01842 ACT domain 11 76 2.5E-11 T 11-10-2018 IPR002912 ACT domain AMC99_01050 dc7a02ffc924b7f1805ec6c4b5421c44 282 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 69 239 2.1E-35 T 11-10-2018 AMC99_01050 dc7a02ffc924b7f1805ec6c4b5421c44 282 Gene3D G3DSA:3.40.50.1000 30 273 7.3E-66 T 11-10-2018 IPR023214 HAD superfamily AMC99_01050 dc7a02ffc924b7f1805ec6c4b5421c44 282 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 67 272 1.4E-63 T 11-10-2018 AMC99_01050 dc7a02ffc924b7f1805ec6c4b5421c44 282 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 164 5.3E-6 T 11-10-2018 AMC99_01050 dc7a02ffc924b7f1805ec6c4b5421c44 282 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 227 246 5.3E-6 T 11-10-2018 AMC99_01050 dc7a02ffc924b7f1805ec6c4b5421c44 282 Pfam PF12710 haloacid dehalogenase-like hydrolase 71 237 5.5E-20 T 11-10-2018 AMC99_01050 dc7a02ffc924b7f1805ec6c4b5421c44 282 SUPERFAMILY SSF56784 68 270 1.1E-45 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_01432 eeb7edf042f168df0f5c55b97f36ea8c 129 Pfam PF07027 Protein of unknown function (DUF1318) 28 116 2.9E-24 T 11-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 Pfam PF02629 CoA binding domain 6 99 7.6E-28 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 SUPERFAMILY SSF52210 123 292 3.14E-54 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 SUPERFAMILY SSF51735 1 122 5.69E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 PIRSF PIRSF001553 1 295 3.6E-128 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 292 42.247 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 SMART SM00881 4 100 4.1E-29 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 Gene3D G3DSA:3.40.50.720 2 123 1.8E-49 T 11-10-2018 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 292 1.9E-135 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 240 253 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 Pfam PF00549 CoA-ligase 151 274 8.9E-20 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.7E-39 T 11-10-2018 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.7E-39 T 11-10-2018 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 PRINTS PR01798 Succinyl-CoA synthase signature 244 261 2.7E-39 T 11-10-2018 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.7E-39 T 11-10-2018 AMC99_01506 a50a5d0540c0cd75ab595f5e56d39f82 296 Gene3D G3DSA:3.40.50.261 124 292 3.5E-71 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AMC99_00776 52f3ff8d4eb16363b18b6dfccb2835e9 246 Gene3D G3DSA:1.10.1060.10 28 138 6.9E-9 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_00776 52f3ff8d4eb16363b18b6dfccb2835e9 246 SUPERFAMILY SSF46548 41 135 9.24E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_00776 52f3ff8d4eb16363b18b6dfccb2835e9 246 Pfam PF13534 4Fe-4S dicluster domain 62 123 2.5E-9 T 11-10-2018 AMC99_00776 52f3ff8d4eb16363b18b6dfccb2835e9 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 109 120 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_01933 fce89ee6a3264beb68cef03be452ccaf 460 SUPERFAMILY SSF53720 4 457 1.44E-139 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_01933 fce89ee6a3264beb68cef03be452ccaf 460 Pfam PF00171 Aldehyde dehydrogenase family 4 456 1.2E-138 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_01933 fce89ee6a3264beb68cef03be452ccaf 460 Gene3D G3DSA:3.40.605.10 4 454 1.3E-146 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_01933 fce89ee6a3264beb68cef03be452ccaf 460 Gene3D G3DSA:3.40.309.10 238 429 1.3E-146 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_02414 9b438012ecd9d2181b03c5a6da89e78c 554 Gene3D G3DSA:3.60.21.70 138 554 5.2E-110 T 11-10-2018 IPR038607 PhoD-like superfamily AMC99_02414 9b438012ecd9d2181b03c5a6da89e78c 554 Gene3D G3DSA:2.60.40.380 41 137 2.8E-27 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 AMC99_02414 9b438012ecd9d2181b03c5a6da89e78c 554 SUPERFAMILY SSF56300 138 525 2.21E-25 T 11-10-2018 AMC99_02414 9b438012ecd9d2181b03c5a6da89e78c 554 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 48 135 4.3E-25 T 11-10-2018 IPR032093 Phospholipase D, N-terminal AMC99_02414 9b438012ecd9d2181b03c5a6da89e78c 554 Pfam PF09423 PhoD-like phosphatase 146 523 2.9E-108 T 11-10-2018 IPR018946 Alkaline phosphatase D-related AMC99_00858 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:1.20.1220.12 560 698 9.3E-69 T 11-10-2018 AMC99_00858 d4b313de8960d9e1f78255881ab2a929 698 Pfam PF01274 Malate synthase 22 673 3.3E-163 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMC99_00858 d4b313de8960d9e1f78255881ab2a929 698 Hamap MF_00641 Malate synthase G [glcB]. 1 698 343.962 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMC99_00858 d4b313de8960d9e1f78255881ab2a929 698 SUPERFAMILY SSF51645 3 697 8.76E-279 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMC99_00858 d4b313de8960d9e1f78255881ab2a929 698 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 697 0.0 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMC99_00858 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:2.170.170.11 135 243 3.8E-263 T 11-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 AMC99_00858 d4b313de8960d9e1f78255881ab2a929 698 Gene3D G3DSA:3.20.20.360 10 559 3.8E-263 T 11-10-2018 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 Pfam PF00072 Response regulator receiver domain 10 121 4.6E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 Pfam PF02954 Bacterial regulatory protein, Fis family 426 464 6.0E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 SMART SM00448 7 121 3.9E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 Gene3D G3DSA:3.40.50.2300 2 142 2.0E-25 T 11-10-2018 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 3.4E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 3.4E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 Gene3D G3DSA:3.40.50.300 143 320 7.9E-49 T 11-10-2018 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 SUPERFAMILY SSF52540 150 392 2.24E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 SUPERFAMILY SSF52172 9 194 9.68E-31 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 SUPERFAMILY SSF46689 420 469 7.43E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 Pfam PF00158 Sigma-54 interaction domain 150 316 3.0E-46 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 Gene3D G3DSA:1.10.8.60 321 397 2.8E-20 T 11-10-2018 AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 SMART SM00382 170 341 1.9E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01751 d5de7171ea1b8ad3830d0138c4f724f0 472 Gene3D G3DSA:1.10.10.60 424 468 9.0E-12 T 11-10-2018 AMC99_01064 f168c2ea83d99874f316c609fcecf53a 375 Gene3D G3DSA:3.20.20.105 1 375 2.4E-168 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMC99_01064 f168c2ea83d99874f316c609fcecf53a 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 368 2.8E-84 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMC99_01064 f168c2ea83d99874f316c609fcecf53a 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 371 54.548 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMC99_01064 f168c2ea83d99874f316c609fcecf53a 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 372 1.2E-151 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMC99_01064 f168c2ea83d99874f316c609fcecf53a 375 SUPERFAMILY SSF51713 4 370 3.27E-153 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMC99_01064 f168c2ea83d99874f316c609fcecf53a 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 372 2.3E-146 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AMC99_00290 b8d770144d584d3c0e1ab52cbfab068d 434 SUPERFAMILY SSF53300 225 366 2.97E-8 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMC99_00290 b8d770144d584d3c0e1ab52cbfab068d 434 Gene3D G3DSA:3.40.50.410 220 390 5.1E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMC99_00290 b8d770144d584d3c0e1ab52cbfab068d 434 Pfam PF01882 Protein of unknown function DUF58 188 273 8.4E-22 T 11-10-2018 IPR002881 Domain of unknown function DUF58 AMC99_01404 b78f72ce380589b7b6d0b893f2055d05 147 SUPERFAMILY SSF46785 3 138 6.83E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01404 b78f72ce380589b7b6d0b893f2055d05 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 1.8E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01404 b78f72ce380589b7b6d0b893f2055d05 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 1.8E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01404 b78f72ce380589b7b6d0b893f2055d05 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 1.8E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01404 b78f72ce380589b7b6d0b893f2055d05 147 Gene3D G3DSA:1.10.10.10 3 144 1.3E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01404 b78f72ce380589b7b6d0b893f2055d05 147 SMART SM00347 22 122 1.7E-25 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01404 b78f72ce380589b7b6d0b893f2055d05 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site AMC99_01404 b78f72ce380589b7b6d0b893f2055d05 147 Pfam PF01047 MarR family 29 86 6.1E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01182 aef334717760f8adeebeaec74404b563 258 SUPERFAMILY SSF51556 2 254 1.52E-84 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_01182 aef334717760f8adeebeaec74404b563 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 4.1E-83 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AMC99_01182 aef334717760f8adeebeaec74404b563 258 Gene3D G3DSA:3.20.20.140 1 257 9.3E-89 T 11-10-2018 AMC99_01182 aef334717760f8adeebeaec74404b563 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMC99_01182 aef334717760f8adeebeaec74404b563 258 PIRSF PIRSF005902 1 258 1.1E-75 T 11-10-2018 IPR001130 TatD family GO:0016788 AMC99_01182 aef334717760f8adeebeaec74404b563 258 Pfam PF01026 TatD related DNase 3 253 2.1E-76 T 11-10-2018 IPR001130 TatD family GO:0016788 AMC99_01182 aef334717760f8adeebeaec74404b563 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMC99_02591 469668d83c4776a43add6d5118761df5 412 Gene3D G3DSA:2.70.70.10 286 411 5.8E-20 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_02591 469668d83c4776a43add6d5118761df5 412 SUPERFAMILY SSF51261 290 411 6.8E-18 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_02591 469668d83c4776a43add6d5118761df5 412 Pfam PF01551 Peptidase family M23 319 407 1.9E-13 T 11-10-2018 IPR016047 Peptidase M23 AMC99_01020 3bd6020a5ffaa5e79a4552adc7975b27 447 Gene3D G3DSA:1.20.1250.20 239 434 1.0E-12 T 11-10-2018 AMC99_01020 3bd6020a5ffaa5e79a4552adc7975b27 447 SUPERFAMILY SSF103473 21 429 1.7E-38 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_01020 3bd6020a5ffaa5e79a4552adc7975b27 447 Gene3D G3DSA:1.20.1250.20 9 210 1.8E-19 T 11-10-2018 AMC99_01020 3bd6020a5ffaa5e79a4552adc7975b27 447 Pfam PF07690 Major Facilitator Superfamily 24 391 4.1E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Gene3D G3DSA:3.30.1360.40 245 341 5.1E-209 T 11-10-2018 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Gene3D G3DSA:1.10.268.10 378 494 5.1E-209 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 41 507 3.1E-140 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Gene3D G3DSA:3.90.199.10 42 522 5.1E-209 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 19 897 0.0 T 11-10-2018 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 18 900 22.576 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 698 745 5.4E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 843 898 6.0E-4 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 540 586 7.0E-15 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 694 2.4 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 787 821 2.7E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 591 638 1.5E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 SUPERFAMILY SSF101904 534 910 9.59E-88 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMC99_01200 5b19c324262474054f0cc211e47056e8 942 SMART SM00434 20 500 2.3E-252 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_01200 5b19c324262474054f0cc211e47056e8 942 SUPERFAMILY SSF56719 39 522 1.83E-167 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMC99_02793 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 268 291 4.9E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMC99_02793 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 83 110 4.9E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMC99_02793 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 27 53 4.9E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMC99_02793 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 398 419 4.9E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMC99_02793 34bcd92d575d522349b80106e114b591 548 PRINTS PR00298 60kDa chaperonin signature 350 375 4.9E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMC99_02793 34bcd92d575d522349b80106e114b591 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMC99_02793 34bcd92d575d522349b80106e114b591 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 1.5E-259 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMC99_02793 34bcd92d575d522349b80106e114b591 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 42.292 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AMC99_02793 34bcd92d575d522349b80106e114b591 548 SUPERFAMILY SSF52029 186 376 4.71E-85 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AMC99_02793 34bcd92d575d522349b80106e114b591 548 Gene3D G3DSA:1.10.560.10 8 522 4.0E-240 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMC99_02793 34bcd92d575d522349b80106e114b591 548 Gene3D G3DSA:3.50.7.10 192 372 4.0E-240 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AMC99_02793 34bcd92d575d522349b80106e114b591 548 Gene3D G3DSA:3.30.260.10 136 410 4.0E-240 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMC99_02793 34bcd92d575d522349b80106e114b591 548 SUPERFAMILY SSF48592 7 522 1.58E-76 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AMC99_02793 34bcd92d575d522349b80106e114b591 548 SUPERFAMILY SSF54849 138 204 1.12E-24 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMC99_02793 34bcd92d575d522349b80106e114b591 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 526 2.5E-96 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMC99_00601 ce6730dc495f96a6ff66e3f3edaeeb48 456 SUPERFAMILY SSF55931 28 452 5.2E-67 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AMC99_00601 ce6730dc495f96a6ff66e3f3edaeeb48 456 Gene3D G3DSA:3.30.590.20 3 456 9.5E-177 T 11-10-2018 AMC99_00601 ce6730dc495f96a6ff66e3f3edaeeb48 456 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 58 360 7.7E-96 T 11-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMC99_00601 ce6730dc495f96a6ff66e3f3edaeeb48 456 PIRSF PIRSF017901 1 455 5.5E-178 T 11-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMC99_00601 ce6730dc495f96a6ff66e3f3edaeeb48 456 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 14 453 3.5E-215 T 11-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 AMC99_02054 1d24ad109464e00ee36eda508b16e098 598 Pfam PF05960 Bacterial protein of unknown function (DUF885) 56 590 2.4E-97 T 11-10-2018 IPR010281 Protein of unknown function DUF885 AMC99_00166 260f3c3b9cbdf3e29d9cd22b1c5ad001 89 Gene3D G3DSA:1.10.10.1150 16 86 1.5E-5 T 11-10-2018 AMC99_00166 260f3c3b9cbdf3e29d9cd22b1c5ad001 89 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 20 85 9.2E-16 T 11-10-2018 IPR008792 Coenzyme PQQ synthesis D AMC99_02093 b36ecc4a7c1978214bd5cca568f08455 525 SUPERFAMILY SSF46894 8 100 2.24E-14 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_02093 b36ecc4a7c1978214bd5cca568f08455 525 Gene3D G3DSA:1.10.10.10 2 103 1.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02093 b36ecc4a7c1978214bd5cca568f08455 525 SUPERFAMILY SSF48452 299 488 3.1E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02093 b36ecc4a7c1978214bd5cca568f08455 525 Gene3D G3DSA:1.25.40.10 262 508 3.1E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02093 b36ecc4a7c1978214bd5cca568f08455 525 SMART SM00862 25 100 9.1E-6 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_02093 b36ecc4a7c1978214bd5cca568f08455 525 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 100 1.3E-9 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00612 be0423f83193185aa84768ec2f29296d 445 SUPERFAMILY SSF82689 342 438 8.76E-30 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_00612 be0423f83193185aa84768ec2f29296d 445 Pfam PF00924 Mechanosensitive ion channel 235 427 3.1E-48 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_00612 be0423f83193185aa84768ec2f29296d 445 SUPERFAMILY SSF82861 189 272 6.54E-6 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMC99_00612 be0423f83193185aa84768ec2f29296d 445 SUPERFAMILY SSF50182 273 339 5.23E-16 T 11-10-2018 IPR010920 LSM domain superfamily AMC99_00612 be0423f83193185aa84768ec2f29296d 445 Gene3D G3DSA:2.30.30.60 289 337 4.3E-17 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMC99_00612 be0423f83193185aa84768ec2f29296d 445 Gene3D G3DSA:3.30.70.100 340 432 2.0E-22 T 11-10-2018 AMC99_01044 a3a364a5ea0c834ca2749a225ad9158d 82 Pfam PF11720 Peptidase inhibitor I78 family 17 82 6.5E-8 T 11-10-2018 IPR021719 Proteinase inhibitor I78 AMC99_01044 a3a364a5ea0c834ca2749a225ad9158d 82 Gene3D G3DSA:3.30.10.10 15 81 2.2E-15 T 11-10-2018 AMC99_00658 3c34ab88eb0041ba62bb4766624d6257 165 SMART SM00987 1 157 4.1E-27 T 11-10-2018 AMC99_00658 3c34ab88eb0041ba62bb4766624d6257 165 Gene3D G3DSA:3.40.470.10 1 165 6.1E-59 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_00658 3c34ab88eb0041ba62bb4766624d6257 165 SMART SM00986 1 157 4.1E-27 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_00658 3c34ab88eb0041ba62bb4766624d6257 165 SUPERFAMILY SSF52141 3 163 1.11E-41 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_00658 3c34ab88eb0041ba62bb4766624d6257 165 Pfam PF03167 Uracil DNA glycosylase superfamily 5 157 4.8E-25 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_00236 e224ffb6557b2f27b161cfda3363d013 256 Gene3D G3DSA:3.40.50.720 3 256 9.1E-74 T 11-10-2018 AMC99_00236 e224ffb6557b2f27b161cfda3363d013 256 Pfam PF00899 ThiF family 13 250 2.3E-50 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMC99_00236 e224ffb6557b2f27b161cfda3363d013 256 SUPERFAMILY SSF69572 3 254 3.01E-68 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AMC99_01302 c4715136c172f1509fbb15352097d99a 464 SUPERFAMILY SSF56801 2 462 8.5E-116 T 11-10-2018 AMC99_01302 c4715136c172f1509fbb15352097d99a 464 TIGRFAM TIGR03098 ligase_PEP_1: acyl-CoA ligase (AMP-forming), exosortase A-associated 1 460 1.5E-191 T 11-10-2018 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated AMC99_01302 c4715136c172f1509fbb15352097d99a 464 Gene3D G3DSA:3.40.50.12780 1 361 1.9E-86 T 11-10-2018 AMC99_01302 c4715136c172f1509fbb15352097d99a 464 Pfam PF13193 AMP-binding enzyme C-terminal domain 377 452 5.5E-11 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_01302 c4715136c172f1509fbb15352097d99a 464 Pfam PF00501 AMP-binding enzyme 1 368 3.1E-73 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_01302 c4715136c172f1509fbb15352097d99a 464 ProSitePatterns PS00455 Putative AMP-binding domain signature. 115 126 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_01302 c4715136c172f1509fbb15352097d99a 464 Gene3D G3DSA:3.30.300.30 363 464 3.2E-24 T 11-10-2018 AMC99_00707 3fafb28827ab36d443a05c153102eb6a 214 SUPERFAMILY SSF48452 65 188 6.42E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00707 3fafb28827ab36d443a05c153102eb6a 214 Pfam PF13432 Tetratricopeptide repeat 92 153 8.4E-8 T 11-10-2018 AMC99_00707 3fafb28827ab36d443a05c153102eb6a 214 Gene3D G3DSA:1.25.40.10 78 206 2.6E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02578 c849fe9b111c9e963de601c9a50e667a 579 SUPERFAMILY SSF55486 251 490 4.21E-43 T 11-10-2018 AMC99_02578 c849fe9b111c9e963de601c9a50e667a 579 SUPERFAMILY SSF63737 55 237 1.57E-18 T 11-10-2018 AMC99_02578 c849fe9b111c9e963de601c9a50e667a 579 Gene3D G3DSA:1.10.390.60 245 484 3.6E-36 T 11-10-2018 AMC99_02578 c849fe9b111c9e963de601c9a50e667a 579 Gene3D G3DSA:2.60.40.1730 54 238 2.1E-16 T 11-10-2018 AMC99_02578 c849fe9b111c9e963de601c9a50e667a 579 Pfam PF01433 Peptidase family M1 domain 252 441 4.1E-16 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 AMC99_00542 b5edf2975bd9085e633b2ad381a2c8a5 197 PRINTS PR00625 DnaJ domain signature 175 195 1.9E-5 T 11-10-2018 IPR001623 DnaJ domain AMC99_00542 b5edf2975bd9085e633b2ad381a2c8a5 197 PRINTS PR00625 DnaJ domain signature 140 158 1.9E-5 T 11-10-2018 IPR001623 DnaJ domain AMC99_00542 b5edf2975bd9085e633b2ad381a2c8a5 197 PRINTS PR00625 DnaJ domain signature 158 173 1.9E-5 T 11-10-2018 IPR001623 DnaJ domain AMC99_00542 b5edf2975bd9085e633b2ad381a2c8a5 197 SUPERFAMILY SSF46565 139 192 6.28E-11 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_00542 b5edf2975bd9085e633b2ad381a2c8a5 197 Gene3D G3DSA:1.10.287.110 126 195 4.2E-9 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AMC99_00542 b5edf2975bd9085e633b2ad381a2c8a5 197 Pfam PF00226 DnaJ domain 142 193 3.5E-8 T 11-10-2018 IPR001623 DnaJ domain AMC99_00542 b5edf2975bd9085e633b2ad381a2c8a5 197 SMART SM00271 137 195 1.8E-6 T 11-10-2018 IPR001623 DnaJ domain AMC99_01936 3a20668cad747f11caed8f52be1272b9 390 PIRSF PIRSF000429 1 390 3.4E-113 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_01936 3a20668cad747f11caed8f52be1272b9 390 Gene3D G3DSA:3.40.47.10 6 273 1.1E-129 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01936 3a20668cad747f11caed8f52be1272b9 390 Pfam PF02803 Thiolase, C-terminal domain 267 388 9.0E-41 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMC99_01936 3a20668cad747f11caed8f52be1272b9 390 Gene3D G3DSA:3.40.47.10 128 386 1.1E-129 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01936 3a20668cad747f11caed8f52be1272b9 390 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 AMC99_01936 3a20668cad747f11caed8f52be1272b9 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 2.5E-121 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_01936 3a20668cad747f11caed8f52be1272b9 390 SUPERFAMILY SSF53901 4 267 5.53E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01936 3a20668cad747f11caed8f52be1272b9 390 SUPERFAMILY SSF53901 268 388 1.98E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01936 3a20668cad747f11caed8f52be1272b9 390 Pfam PF00108 Thiolase, N-terminal domain 5 260 1.0E-61 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMC99_02695 076319c5d960e7bb62e5c41483747637 300 Gene3D G3DSA:1.10.10.60 173 272 3.5E-14 T 11-10-2018 AMC99_02695 076319c5d960e7bb62e5c41483747637 300 Pfam PF12833 Helix-turn-helix domain 195 271 1.3E-12 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_02695 076319c5d960e7bb62e5c41483747637 300 SMART SM00342 187 271 4.3E-4 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_01666 4daa2e478cef76b96b1a6b8751630f62 515 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 90 244 2.4E-8 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMC99_02209 2f015ea711aa328ee8ebe199dbec089e 163 Gene3D G3DSA:1.20.910.10 2 159 1.1E-21 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMC99_02209 2f015ea711aa328ee8ebe199dbec089e 163 SUPERFAMILY SSF48613 9 158 8.9E-17 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 Gene3D G3DSA:3.90.930.12 83 177 5.2E-39 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 Pfam PF00347 Ribosomal protein L6 91 164 3.9E-17 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 Pfam PF00347 Ribosomal protein L6 11 82 7.7E-15 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.5E-75 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.571 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 SUPERFAMILY SSF56053 83 177 4.71E-36 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 PIRSF PIRSF002162 1 177 2.5E-47 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 SUPERFAMILY SSF56053 1 82 2.13E-25 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.7E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 Gene3D G3DSA:3.90.930.12 1 82 3.0E-29 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01531 d0a23e020e2e0daf569ecf391806aa96 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 Gene3D G3DSA:3.30.470.130 1 446 8.0E-190 T 11-10-2018 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 5.7E-82 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 3 445 8.8E-215 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 4.1E-45 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 SMART SM00878 336 441 8.4E-65 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 SUPERFAMILY SSF51246 331 444 3.56E-43 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 4.8E-40 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 SUPERFAMILY SSF56059 84 347 1.77E-73 T 11-10-2018 AMC99_00646 d54e841e77e3b748b77655f6e5ceb2a1 449 SUPERFAMILY SSF52440 2 114 1.9E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AMC99_00192 097e55f914cc8b7fb07b623b1071e393 238 Gene3D G3DSA:3.40.50.300 7 236 2.1E-68 T 11-10-2018 AMC99_00192 097e55f914cc8b7fb07b623b1071e393 238 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_00192 097e55f914cc8b7fb07b623b1071e393 238 SMART SM00382 38 226 4.7E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00192 097e55f914cc8b7fb07b623b1071e393 238 SUPERFAMILY SSF52540 10 231 1.54E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00192 097e55f914cc8b7fb07b623b1071e393 238 Pfam PF00005 ABC transporter 29 178 2.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_01425 db227788b9a78390fdaabb3ae003c7f9 251 SUPERFAMILY SSF56281 2 251 3.64E-70 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_01425 db227788b9a78390fdaabb3ae003c7f9 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 170 251 2.9E-24 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMC99_01425 db227788b9a78390fdaabb3ae003c7f9 251 PIRSF PIRSF005457 1 251 1.4E-97 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMC99_01425 db227788b9a78390fdaabb3ae003c7f9 251 Gene3D G3DSA:3.60.15.10 2 251 2.0E-78 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_01425 db227788b9a78390fdaabb3ae003c7f9 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 7.5E-91 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMC99_01425 db227788b9a78390fdaabb3ae003c7f9 251 SMART SM00849 12 169 3.8E-31 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_01425 db227788b9a78390fdaabb3ae003c7f9 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 251 39.156 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 AMC99_01425 db227788b9a78390fdaabb3ae003c7f9 251 Pfam PF00753 Metallo-beta-lactamase superfamily 30 169 2.9E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_00463 c3993d5abdf0bd55dbecff0fbf10ad7a 128 SUPERFAMILY SSF54593 10 126 2.2E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00463 c3993d5abdf0bd55dbecff0fbf10ad7a 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 124 1.7E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_00463 c3993d5abdf0bd55dbecff0fbf10ad7a 128 Gene3D G3DSA:3.10.180.10 2 127 8.3E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00632 3e506342c82d024a3d77801bf2e547ef 145 Gene3D G3DSA:3.10.50.40 5 145 4.7E-39 T 11-10-2018 AMC99_00632 3e506342c82d024a3d77801bf2e547ef 145 SUPERFAMILY SSF54534 4 142 1.16E-31 T 11-10-2018 AMC99_00632 3e506342c82d024a3d77801bf2e547ef 145 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 138 1.8E-12 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMC99_00435 dbde6e8279d683e0e54011cc8b78e7f8 104 SUPERFAMILY SSF101386 2 90 3.27E-25 T 11-10-2018 AMC99_00435 dbde6e8279d683e0e54011cc8b78e7f8 104 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 20.972 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AMC99_00435 dbde6e8279d683e0e54011cc8b78e7f8 104 Gene3D G3DSA:1.10.287.1080 1 93 1.0E-30 T 11-10-2018 AMC99_00435 dbde6e8279d683e0e54011cc8b78e7f8 104 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 5 90 9.5E-18 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 AMC99_00435 dbde6e8279d683e0e54011cc8b78e7f8 104 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 4 87 1.8E-30 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 AMC99_00825 57915975e6c2f5f624517e8ad77d5ee4 475 Gene3D G3DSA:3.30.1490.270 347 407 4.2E-28 T 11-10-2018 AMC99_00825 57915975e6c2f5f624517e8ad77d5ee4 475 PIRSF PIRSF005522 1 475 1.1E-216 T 11-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 AMC99_00825 57915975e6c2f5f624517e8ad77d5ee4 475 SUPERFAMILY SSF56059 18 466 2.07E-64 T 11-10-2018 AMC99_00825 57915975e6c2f5f624517e8ad77d5ee4 475 Pfam PF14403 Circularly permuted ATP-grasp type 2 74 451 3.3E-156 T 11-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 AMC99_00825 57915975e6c2f5f624517e8ad77d5ee4 475 Gene3D G3DSA:3.40.50.11290 213 310 4.8E-37 T 11-10-2018 AMC99_00310 78b8254b37eddfdafbb8cffd74375191 562 SMART SM01079 90 274 7.4E-54 T 11-10-2018 IPR006189 CHASE domain AMC99_00310 78b8254b37eddfdafbb8cffd74375191 562 Gene3D G3DSA:3.30.450.350 94 290 2.2E-23 T 11-10-2018 AMC99_00310 78b8254b37eddfdafbb8cffd74375191 562 Pfam PF07536 HWE histidine kinase 359 441 8.5E-25 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_00310 78b8254b37eddfdafbb8cffd74375191 562 Gene3D G3DSA:3.30.565.10 416 548 1.8E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00310 78b8254b37eddfdafbb8cffd74375191 562 SMART SM00911 359 441 3.1E-34 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_00310 78b8254b37eddfdafbb8cffd74375191 562 Pfam PF03924 CHASE domain 93 271 1.1E-44 T 11-10-2018 IPR006189 CHASE domain AMC99_02664 836d1d34aeadf9400e58a26374861b90 191 Gene3D G3DSA:1.20.5.510 14 53 7.6E-8 T 11-10-2018 AMC99_02664 836d1d34aeadf9400e58a26374861b90 191 Pfam PF00355 Rieske [2Fe-2S] domain 100 177 9.1E-11 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AMC99_02664 836d1d34aeadf9400e58a26374861b90 191 Gene3D G3DSA:2.102.10.10 54 191 5.5E-43 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMC99_02664 836d1d34aeadf9400e58a26374861b90 191 SUPERFAMILY SSF50022 44 188 6.55E-36 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AMC99_02664 836d1d34aeadf9400e58a26374861b90 191 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 22 191 6.1E-60 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMC99_02664 836d1d34aeadf9400e58a26374861b90 191 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 14 53 7.9E-13 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AMC99_02664 836d1d34aeadf9400e58a26374861b90 191 PRINTS PR00162 Rieske 2Fe-2S subunit signature 151 163 3.4E-15 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMC99_02664 836d1d34aeadf9400e58a26374861b90 191 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 3.4E-15 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMC99_02664 836d1d34aeadf9400e58a26374861b90 191 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 135 3.4E-15 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AMC99_00077 eb86654eb93d7b59ec391f964f25383c 438 Pfam PF03743 Bacterial conjugation TrbI-like protein 227 431 1.1E-31 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AMC99_00832 84f84aeeb654baad7fa254d8f37c8ddf 225 Pfam PF13630 SdpI/YhfL protein family 140 208 7.2E-16 T 11-10-2018 IPR025962 SdpI/YhfL protein family AMC99_00832 84f84aeeb654baad7fa254d8f37c8ddf 225 PIRSF PIRSF038959 1 219 1.1E-37 T 11-10-2018 IPR026272 Immunity protein SdpI AMC99_00832 84f84aeeb654baad7fa254d8f37c8ddf 225 Pfam PF07853 Protein of unknown function (DUF1648) 13 61 7.2E-9 T 11-10-2018 IPR012867 Domain of unknown function DUF1648 AMC99_01407 e541a631c53c4afe1d0738e6847b2d76 261 Gene3D G3DSA:3.75.10.10 4 257 1.5E-53 T 11-10-2018 AMC99_01407 e541a631c53c4afe1d0738e6847b2d76 261 Pfam PF02274 Amidinotransferase 35 254 1.1E-9 T 11-10-2018 AMC99_01407 e541a631c53c4afe1d0738e6847b2d76 261 SUPERFAMILY SSF55909 11 257 9.16E-45 T 11-10-2018 AMC99_02628 db1691a1f27e9ec482b1f07015e1c48d 389 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 32 382 3.7E-93 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMC99_02628 db1691a1f27e9ec482b1f07015e1c48d 389 Gene3D G3DSA:3.40.50.620 23 238 2.7E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02628 db1691a1f27e9ec482b1f07015e1c48d 389 SUPERFAMILY SSF52402 30 274 1.15E-46 T 11-10-2018 AMC99_02628 db1691a1f27e9ec482b1f07015e1c48d 389 Gene3D G3DSA:2.40.30.10 305 387 2.4E-14 T 11-10-2018 AMC99_02628 db1691a1f27e9ec482b1f07015e1c48d 389 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 31 383 37.668 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMC99_02628 db1691a1f27e9ec482b1f07015e1c48d 389 Pfam PF03054 tRNA methyl transferase 32 382 8.4E-106 T 11-10-2018 AMC99_02628 db1691a1f27e9ec482b1f07015e1c48d 389 Gene3D G3DSA:2.30.30.280 244 304 1.7E-14 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:1.10.150.20 521 606 1.8E-16 T 11-10-2018 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 SUPERFAMILY SSF52113 615 689 9.72E-17 T 11-10-2018 IPR036420 BRCT domain superfamily AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 345 360 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:1.10.287.610 11 83 1.1E-21 T 11-10-2018 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:3.30.470.90 84 331 8.0E-100 T 11-10-2018 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:2.40.50.140 332 403 3.8E-31 T 11-10-2018 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 PIRSF PIRSF001604 9 693 1.2E-228 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 SUPERFAMILY SSF47781 415 601 1.11E-50 T 11-10-2018 IPR010994 RuvA domain 2-like AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF12826 Helix-hairpin-helix motif 524 595 2.2E-13 T 11-10-2018 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 335 407 3.0E-29 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 620 682 2.1E-8 T 11-10-2018 IPR001357 BRCT domain AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:3.40.50.10190 608 691 4.6E-25 T 11-10-2018 IPR036420 BRCT domain superfamily AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 419 446 1.2E-10 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:1.10.150.20 444 519 1.0E-27 T 11-10-2018 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 SUPERFAMILY SSF56091 12 330 1.83E-113 T 11-10-2018 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 130 159 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Hamap MF_01588 DNA ligase [ligA]. 14 689 49.609 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 SUPERFAMILY SSF50249 332 407 1.47E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 SMART SM00532 15 460 7.0E-248 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 SMART SM00292 615 692 1.6E-8 T 11-10-2018 IPR001357 BRCT domain AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 23 685 4.8E-231 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Gene3D G3DSA:2.20.70.80 406 443 4.4E-13 T 11-10-2018 AMC99_01361 1208c2e041d24277a69d0e20b8a77663 693 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 15 332 1.7E-118 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AMC99_02513 99dd99ad9054afe9a0059128f88f5068 159 Pfam PF00572 Ribosomal protein L13 19 144 1.1E-53 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMC99_02513 99dd99ad9054afe9a0059128f88f5068 159 PIRSF PIRSF002181 3 159 4.4E-52 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMC99_02513 99dd99ad9054afe9a0059128f88f5068 159 SUPERFAMILY SSF52161 11 149 3.66E-56 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_02513 99dd99ad9054afe9a0059128f88f5068 159 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 20 147 27.838 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMC99_02513 99dd99ad9054afe9a0059128f88f5068 159 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 12 147 6.5E-58 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02513 99dd99ad9054afe9a0059128f88f5068 159 Gene3D G3DSA:3.90.1180.10 9 154 3.9E-58 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_01576 20453fd046ce70df3c3c93baf0e77bec 134 SUPERFAMILY SSF110069 12 132 3.01E-46 T 11-10-2018 IPR036767 ApaG domain superfamily AMC99_01576 20453fd046ce70df3c3c93baf0e77bec 134 Gene3D G3DSA:2.60.40.1470 7 134 4.6E-47 T 11-10-2018 IPR036767 ApaG domain superfamily AMC99_01576 20453fd046ce70df3c3c93baf0e77bec 134 Pfam PF04379 ApaG domain 26 111 2.3E-34 T 11-10-2018 IPR007474 ApaG domain AMC99_01576 20453fd046ce70df3c3c93baf0e77bec 134 Hamap MF_00791 Protein ApaG [apaG]. 9 134 28.446 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG AMC99_00482 ae59dec2ba9b2c5fdf90133c34366889 356 Gene3D G3DSA:1.10.540.10 3 120 1.1E-30 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00482 ae59dec2ba9b2c5fdf90133c34366889 356 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 118 1.6E-26 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00482 ae59dec2ba9b2c5fdf90133c34366889 356 Gene3D G3DSA:1.20.140.10 210 353 6.8E-30 T 11-10-2018 AMC99_00482 ae59dec2ba9b2c5fdf90133c34366889 356 SUPERFAMILY SSF47203 210 352 4.35E-34 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00482 ae59dec2ba9b2c5fdf90133c34366889 356 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 214 351 8.2E-24 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00482 ae59dec2ba9b2c5fdf90133c34366889 356 SUPERFAMILY SSF56645 3 199 1.83E-31 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00482 ae59dec2ba9b2c5fdf90133c34366889 356 Gene3D G3DSA:2.40.110.10 121 209 2.2E-7 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.7E-6 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 5.7E-6 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 371 5.7E-6 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 Gene3D G3DSA:1.10.8.260 266 324 3.1E-125 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 8.1E-119 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 Gene3D G3DSA:2.40.30.10 194 341 3.1E-125 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 Pfam PF03486 HI0933-like protein 6 394 5.8E-134 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 SUPERFAMILY SSF51905 3 396 3.84E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 170 1.2E-9 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 364 371 1.2E-9 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.2E-9 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 SUPERFAMILY SSF160996 195 342 4.71E-37 T 11-10-2018 AMC99_00524 3a3bdb625db5f6f83ad0225280d3b90a 407 Gene3D G3DSA:3.50.50.60 8 393 3.1E-125 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01682 bfa8ae624d71692f0e8605b9564cc916 256 Gene3D G3DSA:3.30.1330.30 127 224 2.0E-8 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AMC99_01682 bfa8ae624d71692f0e8605b9564cc916 256 Pfam PF04296 Protein of unknown function (DUF448) 37 116 2.0E-15 T 11-10-2018 IPR007393 Domain of unknown function DUF448 AMC99_01682 bfa8ae624d71692f0e8605b9564cc916 256 SUPERFAMILY SSF55315 123 215 1.03E-7 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AMC99_01682 bfa8ae624d71692f0e8605b9564cc916 256 Gene3D G3DSA:3.30.1230.10 26 126 1.0E-13 T 11-10-2018 IPR035931 YlxR-like superfamily AMC99_01682 bfa8ae624d71692f0e8605b9564cc916 256 SUPERFAMILY SSF64376 32 125 6.54E-19 T 11-10-2018 IPR035931 YlxR-like superfamily AMC99_00313 13685e9044a323f2fbd5f7bc2d6da204 158 Gene3D G3DSA:3.40.50.2300 25 145 1.7E-28 T 11-10-2018 AMC99_00313 13685e9044a323f2fbd5f7bc2d6da204 158 SMART SM00448 28 139 1.9E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00313 13685e9044a323f2fbd5f7bc2d6da204 158 Pfam PF00072 Response regulator receiver domain 30 138 9.9E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00313 13685e9044a323f2fbd5f7bc2d6da204 158 SUPERFAMILY SSF52172 29 139 1.42E-20 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02762 dd98938d4af851b4c1441632615087fe 456 Gene3D G3DSA:3.40.309.10 231 420 1.4E-133 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_02762 dd98938d4af851b4c1441632615087fe 456 Gene3D G3DSA:3.40.605.10 7 446 1.4E-133 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_02762 dd98938d4af851b4c1441632615087fe 456 SUPERFAMILY SSF53720 2 454 3.01E-132 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_02762 dd98938d4af851b4c1441632615087fe 456 Pfam PF00171 Aldehyde dehydrogenase family 3 451 6.1E-123 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.4E-18 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-18 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-18 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.4E-18 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 PRINTS PR01703 Manganese superoxide dismutase signature 120 128 1.4E-18 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 PIRSF PIRSF000349 1 200 5.3E-71 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 SUPERFAMILY SSF46609 1 86 5.63E-30 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 SUPERFAMILY SSF54719 87 195 1.96E-36 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 Gene3D G3DSA:2.40.500.20 86 199 6.3E-35 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 91 191 9.6E-31 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 Gene3D G3DSA:1.10.287.990 20 85 2.8E-21 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_00306 35599692aaec7fdcae966e2b75e9dbf9 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 6.8E-29 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AMC99_02389 62df911378d4d348bcf98d9b92275f07 171 Gene3D G3DSA:3.30.160.150 24 164 3.2E-35 T 11-10-2018 AMC99_02389 62df911378d4d348bcf98d9b92275f07 171 Pfam PF04390 Lipopolysaccharide-assembly 35 154 6.3E-9 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 AMC99_00838 e0bec9a0f7979d64de1eff98dbfb7995 864 Pfam PF00593 TonB dependent receptor 289 863 3.3E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_00838 e0bec9a0f7979d64de1eff98dbfb7995 864 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 174 1.3E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_00838 e0bec9a0f7979d64de1eff98dbfb7995 864 SUPERFAMILY SSF56935 44 864 1.18E-110 T 11-10-2018 AMC99_00838 e0bec9a0f7979d64de1eff98dbfb7995 864 Gene3D G3DSA:2.170.130.10 42 182 1.7E-33 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.5E-34 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 Gene3D G3DSA:3.30.70.600 1 103 4.7E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 6.9E-43 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 SMART SM01403 7 101 2.0E-53 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.166 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 SUPERFAMILY SSF54999 6 102 9.81E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.7E-17 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.7E-17 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01547 862487b6489b0d67bc8eba427c237e24 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.7E-17 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_02350 8594f25f87b6b642a36b3e56ace3cd90 308 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 126 307 8.2E-67 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMC99_02350 8594f25f87b6b642a36b3e56ace3cd90 308 Pfam PF00925 GTP cyclohydrolase II 116 283 5.8E-62 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMC99_02350 8594f25f87b6b642a36b3e56ace3cd90 308 SUPERFAMILY SSF142695 117 285 1.14E-55 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMC99_02350 8594f25f87b6b642a36b3e56ace3cd90 308 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 109 308 38.61 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMC99_02350 8594f25f87b6b642a36b3e56ace3cd90 308 PIRSF PIRSF001259 56 308 5.0E-74 T 11-10-2018 AMC99_02350 8594f25f87b6b642a36b3e56ace3cd90 308 Gene3D G3DSA:3.40.50.10990 110 286 2.6E-67 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMC99_01082 9f383f4b237221b81d84e922c1be65d5 162 Pfam PF13673 Acetyltransferase (GNAT) domain 32 138 2.8E-14 T 11-10-2018 IPR000182 GNAT domain AMC99_01082 9f383f4b237221b81d84e922c1be65d5 162 SUPERFAMILY SSF55729 3 161 3.43E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01082 9f383f4b237221b81d84e922c1be65d5 162 Gene3D G3DSA:3.40.630.30 1 162 1.1E-34 T 11-10-2018 AMC99_01375 3e972e2d45c57e3121e560389e1de597 290 SUPERFAMILY SSF53474 20 279 1.21E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01375 3e972e2d45c57e3121e560389e1de597 290 Gene3D G3DSA:3.40.50.1820 9 280 1.9E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01375 3e972e2d45c57e3121e560389e1de597 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 6.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01375 3e972e2d45c57e3121e560389e1de597 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 66 81 6.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01375 3e972e2d45c57e3121e560389e1de597 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 6.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01375 3e972e2d45c57e3121e560389e1de597 290 PRINTS PR00111 Alpha/beta hydrolase fold signature 224 238 6.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01375 3e972e2d45c57e3121e560389e1de597 290 Pfam PF12697 Alpha/beta hydrolase family 44 273 4.1E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01603 593a6227a742cc9be68f91929cf6989d 192 Gene3D G3DSA:3.30.300.130 118 191 7.6E-29 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMC99_01603 593a6227a742cc9be68f91929cf6989d 192 SUPERFAMILY SSF110836 1 90 5.49E-28 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily AMC99_01603 593a6227a742cc9be68f91929cf6989d 192 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 88 7.6E-28 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMC99_01603 593a6227a742cc9be68f91929cf6989d 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 132 189 4.0E-27 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMC99_01603 593a6227a742cc9be68f91929cf6989d 192 PIRSF PIRSF036773 1 192 5.5E-73 T 11-10-2018 IPR035433 NFU1-like AMC99_01603 593a6227a742cc9be68f91929cf6989d 192 SMART SM00932 3 89 3.9E-42 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal AMC99_01603 593a6227a742cc9be68f91929cf6989d 192 Pfam PF01106 NifU-like domain 124 189 3.7E-28 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AMC99_01603 593a6227a742cc9be68f91929cf6989d 192 SUPERFAMILY SSF117916 115 191 2.05E-26 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMC99_01603 593a6227a742cc9be68f91929cf6989d 192 Gene3D G3DSA:3.30.1370.70 1 95 3.1E-31 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily AMC99_00721 c9549a2eb9935e155e1099448c0ad1e3 295 SUPERFAMILY SSF55961 130 292 1.38E-11 T 11-10-2018 AMC99_00721 c9549a2eb9935e155e1099448c0ad1e3 295 Gene3D G3DSA:3.30.530.20 126 293 3.5E-8 T 11-10-2018 IPR023393 START-like domain superfamily AMC99_00721 c9549a2eb9935e155e1099448c0ad1e3 295 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 130 267 3.0E-6 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase AMC99_01612 78f9df1fc51e209c39ce1dd77c05ae82 165 SUPERFAMILY SSF55486 16 161 1.71E-38 T 11-10-2018 AMC99_01612 78f9df1fc51e209c39ce1dd77c05ae82 165 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 156 21.078 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMC99_01612 78f9df1fc51e209c39ce1dd77c05ae82 165 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AMC99_01612 78f9df1fc51e209c39ce1dd77c05ae82 165 Pfam PF02130 Uncharacterized protein family UPF0054 15 151 4.9E-30 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMC99_01612 78f9df1fc51e209c39ce1dd77c05ae82 165 Gene3D G3DSA:3.40.390.30 2 161 5.7E-40 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AMC99_01612 78f9df1fc51e209c39ce1dd77c05ae82 165 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 41 153 1.5E-31 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMC99_00488 afa9dcf8dbd61790ff4728f1e5357857 212 Pfam PF02502 Ribose/Galactose Isomerase 3 114 8.9E-26 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMC99_00488 afa9dcf8dbd61790ff4728f1e5357857 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 3.5E-21 T 11-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal AMC99_00488 afa9dcf8dbd61790ff4728f1e5357857 212 Gene3D G3DSA:3.40.1400.10 1 211 2.6E-86 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMC99_00488 afa9dcf8dbd61790ff4728f1e5357857 212 SUPERFAMILY SSF89623 1 160 7.46E-35 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMC99_01634 ecd1fc51124a24d9d8d5f27f3c38ff57 321 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 320 7.2E-120 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMC99_01634 ecd1fc51124a24d9d8d5f27f3c38ff57 321 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 320 5.0E-35 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMC99_01634 ecd1fc51124a24d9d8d5f27f3c38ff57 321 Gene3D G3DSA:3.40.47.10 2 321 1.2E-125 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01634 ecd1fc51124a24d9d8d5f27f3c38ff57 321 SUPERFAMILY SSF53901 6 321 2.67E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01634 ecd1fc51124a24d9d8d5f27f3c38ff57 321 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 321 70.128 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMC99_01634 ecd1fc51124a24d9d8d5f27f3c38ff57 321 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 188 2.6E-33 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMC99_02278 f3d7a5e2f83b94bd7f5aa294ba3c93dd 84 Pfam PF04325 Protein of unknown function (DUF465) 31 76 5.8E-10 T 11-10-2018 IPR007420 Protein of unknown function DUF465 AMC99_02278 f3d7a5e2f83b94bd7f5aa294ba3c93dd 84 Gene3D G3DSA:1.20.58.660 12 84 1.0E-17 T 11-10-2018 AMC99_00289 f1e2df871ef5450eb0e5cbee201d4abe 354 Pfam PF01944 Stage II sporulation protein M 137 316 1.6E-29 T 11-10-2018 IPR002798 Stage II sporulation protein M-like AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 Gene3D G3DSA:3.30.300.20 17 107 6.2E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.1E-89 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 Pfam PF07650 KH domain 38 110 2.0E-17 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 SUPERFAMILY SSF54821 108 206 2.49E-37 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 8.8E-37 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 SUPERFAMILY SSF54814 2 106 2.15E-36 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 SMART SM00322 60 125 7.9E-7 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.112 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMC99_01540 c00d9eb22065818dbf034bc0abb2ab38 231 Gene3D G3DSA:3.30.1140.32 108 208 3.3E-41 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01004 3cd8fd43eeb412010534011adbb65b37 461 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 53 461 1.3E-151 T 11-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated AMC99_01004 3cd8fd43eeb412010534011adbb65b37 461 Pfam PF13727 CoA-binding domain 67 211 3.7E-11 T 11-10-2018 AMC99_01004 3cd8fd43eeb412010534011adbb65b37 461 Gene3D G3DSA:3.40.50.720 139 254 7.2E-5 T 11-10-2018 AMC99_01004 3cd8fd43eeb412010534011adbb65b37 461 Pfam PF02397 Bacterial sugar transferase 273 455 6.1E-66 T 11-10-2018 IPR003362 Bacterial sugar transferase AMC99_01004 3cd8fd43eeb412010534011adbb65b37 461 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 19 461 2.1E-124 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMC99_01303 5ad88615f34a50e11e396d2118ec69da 291 SUPERFAMILY SSF55729 107 265 2.47E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01303 5ad88615f34a50e11e396d2118ec69da 291 Pfam PF13480 Acetyltransferase (GNAT) domain 123 249 1.5E-15 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 12 836 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:3.10.20.590 777 837 3.9E-20 T 11-10-2018 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 402 9.3E-63 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:3.40.50.620 34 566 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF09334 tRNA synthetases class I (M) 41 172 7.8E-19 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:3.10.330.110 567 622 0.0 T 11-10-2018 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 837 22.487 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 SUPERFAMILY SSF52374 6 662 1.25E-144 T 11-10-2018 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 4.2E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 4.2E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 486 504 4.2E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 4.2E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 4.2E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.2E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.2E-48 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:3.90.740.10 228 413 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 SUPERFAMILY SSF47323 656 836 2.24E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 SUPERFAMILY SSF50677 224 418 2.51E-46 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 416 572 9.9E-9 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 613 652 4.3E-9 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Gene3D G3DSA:1.10.730.10 11 769 0.0 T 11-10-2018 AMC99_02390 7678057ae65c64b0ccf1f531352a94e4 837 Pfam PF08264 Anticodon-binding domain of tRNA 682 798 4.0E-15 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AMC99_02223 780360f2acb497fae91938c639a5c130 109 SUPERFAMILY SSF52172 1 109 6.26E-15 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02223 780360f2acb497fae91938c639a5c130 109 Pfam PF00072 Response regulator receiver domain 1 102 5.7E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02223 780360f2acb497fae91938c639a5c130 109 Gene3D G3DSA:3.40.50.2300 1 108 2.1E-26 T 11-10-2018 AMC99_02564 fb4893963b53b85850c53cb7c8be878f 283 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 52 227 1.1E-31 T 11-10-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain AMC99_02564 fb4893963b53b85850c53cb7c8be878f 283 Gene3D G3DSA:2.160.20.120 40 241 2.1E-33 T 11-10-2018 AMC99_00071 323476531f40cc2092abc66815c617c0 173 Pfam PF10502 Signal peptidase, peptidase S26 41 172 5.5E-18 T 11-10-2018 IPR019533 Peptidase S26 AMC99_00071 323476531f40cc2092abc66815c617c0 173 SUPERFAMILY SSF51306 42 173 6.8E-20 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMC99_00071 323476531f40cc2092abc66815c617c0 173 Gene3D G3DSA:2.10.109.10 49 173 6.8E-8 T 11-10-2018 AMC99_01307 2704a3da94809d52758c01dae242b55a 398 Gene3D G3DSA:3.40.1350.30 102 236 1.4E-69 T 11-10-2018 AMC99_01307 2704a3da94809d52758c01dae242b55a 398 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 330 360 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site AMC99_01307 2704a3da94809d52758c01dae242b55a 398 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 323 393 2.1E-8 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMC99_01307 2704a3da94809d52758c01dae242b55a 398 SUPERFAMILY SSF53335 45 395 1.62E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01307 2704a3da94809d52758c01dae242b55a 398 Gene3D G3DSA:3.40.50.150 57 391 1.4E-69 T 11-10-2018 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 Gene3D G3DSA:3.40.50.720 10 96 3.7E-31 T 11-10-2018 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 Gene3D G3DSA:3.40.1190.10 97 315 9.2E-75 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 473 41.328 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 467 1.2E-155 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 SUPERFAMILY SSF53623 94 316 5.49E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 Pfam PF01225 Mur ligase family, catalytic domain 11 107 1.4E-26 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 SUPERFAMILY SSF53244 317 470 2.2E-45 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 Pfam PF08245 Mur ligase middle domain 113 297 2.5E-30 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 SUPERFAMILY SSF51984 11 95 8.76E-27 T 11-10-2018 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 Gene3D G3DSA:3.90.190.20 316 477 1.0E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AMC99_01864 08fa721d9a864942101547f14e5d43d6 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 411 2.3E-17 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 Pfam PF00106 short chain dehydrogenase 9 209 5.6E-47 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 SUPERFAMILY SSF51735 9 257 5.61E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 1.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 1.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 9.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 9.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 9.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 9.3E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01935 1c0329c8b33f0afa9e2e75aa456e2e1a 261 Gene3D G3DSA:3.40.50.720 5 260 8.0E-67 T 11-10-2018 AMC99_02665 a5d43acc185bf62f69c999ab69634082 430 Gene3D G3DSA:1.20.810.10 4 428 3.5E-163 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 AMC99_02665 a5d43acc185bf62f69c999ab69634082 430 SUPERFAMILY SSF81648 281 401 5.23E-33 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMC99_02665 a5d43acc185bf62f69c999ab69634082 430 SUPERFAMILY SSF81342 28 280 1.0E-103 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMC99_02665 a5d43acc185bf62f69c999ab69634082 430 PIRSF PIRSF038885 7 417 1.5E-196 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AMC99_02665 a5d43acc185bf62f69c999ab69634082 430 Pfam PF00033 Cytochrome b/b6/petB 36 219 2.8E-72 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMC99_02665 a5d43acc185bf62f69c999ab69634082 430 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 278 386 7.6E-38 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AMC99_02369 91272953a9c5837e7ec4e9784046b533 418 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 9 417 1.0E-163 T 11-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase AMC99_02369 91272953a9c5837e7ec4e9784046b533 418 PIRSF PIRSF020818 4 418 3.8E-171 T 11-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase AMC99_02369 91272953a9c5837e7ec4e9784046b533 418 SUPERFAMILY SSF53474 104 414 1.6E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02369 91272953a9c5837e7ec4e9784046b533 418 Pfam PF06850 PHB de-polymerase C-terminus 216 417 2.0E-91 T 11-10-2018 IPR009656 PHB de-polymerase, C-terminal AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 Pfam PF00072 Response regulator receiver domain 699 808 8.4E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 Pfam PF00512 His Kinase A (phospho-acceptor) domain 435 498 1.4E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 SUPERFAMILY SSF47384 427 498 1.12E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 SUPERFAMILY SSF52172 697 813 1.24E-29 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 SUPERFAMILY SSF55874 490 673 4.71E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 SMART SM00387 541 673 2.0E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 671 2.9E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 Gene3D G3DSA:1.10.287.130 426 499 5.4E-21 T 11-10-2018 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 Gene3D G3DSA:3.40.50.2300 692 819 2.4E-29 T 11-10-2018 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 SMART SM00448 697 808 1.6E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 4.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 670 4.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 4.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 4.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 Gene3D G3DSA:3.30.565.10 502 678 3.7E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01468 f9dee595cde3adfcb7a7796971462fb7 820 SMART SM00388 434 500 2.5E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_02405 f6db1204d0073064a93bdc0b41be93a0 326 SUPERFAMILY SSF55909 3 322 2.14E-100 T 11-10-2018 AMC99_02405 f6db1204d0073064a93bdc0b41be93a0 326 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 321 1.4E-93 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 AMC99_02405 f6db1204d0073064a93bdc0b41be93a0 326 Gene3D G3DSA:3.75.10.10 2 325 2.5E-93 T 11-10-2018 AMC99_01533 4887b767e4125afe6a16c8303a779f9d 101 SUPERFAMILY SSF57716 2 101 3.92E-34 T 11-10-2018 AMC99_01533 4887b767e4125afe6a16c8303a779f9d 101 Gene3D G3DSA:4.10.830.10 43 101 5.9E-22 T 11-10-2018 AMC99_01533 4887b767e4125afe6a16c8303a779f9d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.864 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid AMC99_01533 4887b767e4125afe6a16c8303a779f9d 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 5.4E-24 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01921 4395b7b0ee6842a9b263ad64375eafcd 365 Pfam PF01266 FAD dependent oxidoreductase 6 337 6.5E-44 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AMC99_01921 4395b7b0ee6842a9b263ad64375eafcd 365 Gene3D G3DSA:3.50.50.60 6 339 3.2E-92 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01921 4395b7b0ee6842a9b263ad64375eafcd 365 Gene3D G3DSA:3.30.9.10 78 301 3.2E-92 T 11-10-2018 AMC99_01921 4395b7b0ee6842a9b263ad64375eafcd 365 SUPERFAMILY SSF51905 5 359 2.14E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02568 fd7ed5c769bd7bef03f85deb5a94cca9 882 SMART SM00490 182 271 4.5E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_02568 fd7ed5c769bd7bef03f85deb5a94cca9 882 Gene3D G3DSA:3.40.50.300 152 288 4.1E-35 T 11-10-2018 AMC99_02568 fd7ed5c769bd7bef03f85deb5a94cca9 882 Pfam PF00271 Helicase conserved C-terminal domain 172 270 3.0E-10 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_02568 fd7ed5c769bd7bef03f85deb5a94cca9 882 Gene3D G3DSA:3.40.50.300 3 149 3.9E-26 T 11-10-2018 AMC99_02568 fd7ed5c769bd7bef03f85deb5a94cca9 882 SUPERFAMILY SSF52540 146 390 2.45E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02568 fd7ed5c769bd7bef03f85deb5a94cca9 882 SUPERFAMILY SSF52540 13 140 1.06E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02717 75274fb599d98970043aed15c92b943b 395 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 5 390 64.162 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMC99_02717 75274fb599d98970043aed15c92b943b 395 Gene3D G3DSA:3.40.640.10 49 294 4.9E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_02717 75274fb599d98970043aed15c92b943b 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 212 249 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMC99_02717 75274fb599d98970043aed15c92b943b 395 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 7 384 3.5E-137 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AMC99_02717 75274fb599d98970043aed15c92b943b 395 PIRSF PIRSF000521 19 155 4.9E-10 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMC99_02717 75274fb599d98970043aed15c92b943b 395 PIRSF PIRSF000521 157 389 2.6E-41 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMC99_02717 75274fb599d98970043aed15c92b943b 395 Gene3D G3DSA:3.90.1150.10 16 380 4.9E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_02717 75274fb599d98970043aed15c92b943b 395 Pfam PF00202 Aminotransferase class-III 18 384 8.2E-114 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AMC99_02717 75274fb599d98970043aed15c92b943b 395 SUPERFAMILY SSF53383 5 384 2.09E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 371 420 1.0E-16 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:2.40.50.140 142 204 7.5E-21 T 11-10-2018 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:3.30.300.20 205 283 1.2E-33 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:1.10.150.20 361 426 1.1E-20 T 11-10-2018 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SMART SM00322 307 400 4.7E-5 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SMART SM00322 236 299 5.4 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF54814 285 349 2.55E-16 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:3.30.1480.10 9 134 5.6E-39 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF47794 435 527 2.83E-7 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Pfam PF13184 NusA-like KH domain 236 302 1.2E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF47794 359 420 1.21E-13 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Pfam PF00575 S1 RNA binding domain 138 200 3.1E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF50249 138 205 2.5E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:1.10.150.20 437 479 2.6E-6 T 11-10-2018 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 12 348 9.9E-128 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Pfam PF08529 NusA N-terminal domain 11 131 2.6E-33 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Pfam PF14520 Helix-hairpin-helix domain 438 474 0.0062 T 11-10-2018 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF69705 10 132 1.31E-37 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SUPERFAMILY SSF54814 207 284 4.38E-31 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Gene3D G3DSA:3.30.300.20 284 353 4.5E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 9 424 29.952 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AMC99_01683 dbe375fbd4eb63e7f21f0fb4acaa9d53 553 SMART SM00316 140 206 1.5E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 AMC99_00052 b6549990671f0ece53e48ef749fd9b35 971 Gene3D G3DSA:3.40.50.300 431 639 3.4E-29 T 11-10-2018 AMC99_00052 b6549990671f0ece53e48ef749fd9b35 971 Gene3D G3DSA:3.40.50.300 821 919 1.1E-5 T 11-10-2018 AMC99_00052 b6549990671f0ece53e48ef749fd9b35 971 SUPERFAMILY SSF52540 584 911 7.17E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00052 b6549990671f0ece53e48ef749fd9b35 971 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 281 5.1E-74 T 11-10-2018 IPR014059 Conjugative relaxase, N-terminal AMC99_00052 b6549990671f0ece53e48ef749fd9b35 971 SUPERFAMILY SSF52540 451 598 1.02E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00052 b6549990671f0ece53e48ef749fd9b35 971 Pfam PF08751 TrwC relaxase 12 277 8.5E-74 T 11-10-2018 IPR014862 TrwC relaxase AMC99_00052 b6549990671f0ece53e48ef749fd9b35 971 Pfam PF13604 AAA domain 455 648 4.8E-42 T 11-10-2018 AMC99_00052 b6549990671f0ece53e48ef749fd9b35 971 SUPERFAMILY SSF55464 1 296 8.24E-82 T 11-10-2018 AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF07676 WD40-like Beta Propeller Repeat 236 260 0.0062 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF07676 WD40-like Beta Propeller Repeat 401 435 0.0012 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF07676 WD40-like Beta Propeller Repeat 314 343 4.2E-9 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF07676 WD40-like Beta Propeller Repeat 271 304 7.6E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 55 459 1.6E-121 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 25 458 42.753 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 Pfam PF04052 TolB amino-terminal domain 55 159 3.4E-15 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 Gene3D G3DSA:2.120.10.30 196 462 4.5E-74 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 SUPERFAMILY SSF69304 191 460 4.58E-55 T 11-10-2018 AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 Gene3D G3DSA:3.40.50.10070 42 194 1.8E-23 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 AMC99_00441 af0094cc37ece0b2957c019c2edf1b1d 463 SUPERFAMILY SSF52964 52 190 8.63E-30 T 11-10-2018 AMC99_01487 3eae979c634e22365bed6116450db413 172 Pfam PF03330 Lytic transglycolase 79 166 6.5E-25 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMC99_01487 3eae979c634e22365bed6116450db413 172 Gene3D G3DSA:2.40.40.10 78 170 3.5E-38 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMC99_01487 3eae979c634e22365bed6116450db413 172 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 80 170 1.4E-44 T 11-10-2018 IPR012997 Rare lipoprotein A AMC99_01487 3eae979c634e22365bed6116450db413 172 SUPERFAMILY SSF50685 75 161 8.02E-15 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMC99_01487 3eae979c634e22365bed6116450db413 172 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 8 170 24.463 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AMC99_01344 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 6.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01344 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 6.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01344 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01344 a0164f5367572b5146566fdb387766e8 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 249 6.5E-54 T 11-10-2018 AMC99_01344 a0164f5367572b5146566fdb387766e8 251 Gene3D G3DSA:3.40.50.720 1 251 1.4E-77 T 11-10-2018 AMC99_01344 a0164f5367572b5146566fdb387766e8 251 SUPERFAMILY SSF51735 4 250 3.22E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01344 a0164f5367572b5146566fdb387766e8 251 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 251 1.1E-99 T 11-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 AMC99_01344 a0164f5367572b5146566fdb387766e8 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_01344 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 8.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01344 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 8.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01344 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01344 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 8.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01344 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01344 a0164f5367572b5146566fdb387766e8 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 8.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02597 22625f117d0051a8a359bd677b870555 433 Pfam PF02397 Bacterial sugar transferase 239 427 8.3E-60 T 11-10-2018 IPR003362 Bacterial sugar transferase AMC99_02597 22625f117d0051a8a359bd677b870555 433 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 160 432 1.2E-89 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMC99_00207 ca599c28a023a6150a4e3dbf7471ab1f 379 Gene3D G3DSA:3.40.630.10 119 378 6.7E-57 T 11-10-2018 AMC99_00207 ca599c28a023a6150a4e3dbf7471ab1f 379 Gene3D G3DSA:2.60.40.3120 1 118 2.2E-37 T 11-10-2018 AMC99_00207 ca599c28a023a6150a4e3dbf7471ab1f 379 SUPERFAMILY SSF53187 110 375 3.18E-49 T 11-10-2018 AMC99_00207 ca599c28a023a6150a4e3dbf7471ab1f 379 Pfam PF00246 Zinc carboxypeptidase 132 235 4.1E-12 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 AMC99_02413 d1fcfc3fc448eb46dcda0a7bfba3e155 309 Gene3D G3DSA:3.40.50.1820 40 306 1.1E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02413 d1fcfc3fc448eb46dcda0a7bfba3e155 309 SUPERFAMILY SSF53474 42 306 1.72E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02413 d1fcfc3fc448eb46dcda0a7bfba3e155 309 Pfam PF12697 Alpha/beta hydrolase family 56 297 7.8E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_00382 82caa9b24ad80491052e1c67885f046e 299 Pfam PF06629 MltA-interacting protein MipA 58 299 1.2E-35 T 11-10-2018 IPR010583 MltA-interacting MipA AMC99_00629 25876474503ea1f7e6d8d13c94fba4a4 328 Pfam PF11776 Nickel/cobalt transporter regulator 273 321 7.4E-12 T 11-10-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 561 2.2E-186 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 SUPERFAMILY SSF109604 373 521 8.9E-20 T 11-10-2018 AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 Pfam PF05746 DALR anticodon binding domain 642 723 3.0E-5 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 423 442 4.5E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 4.5E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 4.5E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 272 287 4.5E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 344 360 4.5E-28 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 731 22.828 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_01115 b436ae56b97bce55691c13ff85e86565 733 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 223 731 4.2E-121 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMC99_02722 063f39007ef56d99437c44c1876ae6da 538 Gene3D G3DSA:1.20.1250.20 19 223 6.1E-40 T 11-10-2018 AMC99_02722 063f39007ef56d99437c44c1876ae6da 538 Gene3D G3DSA:1.20.1250.20 323 523 6.3E-14 T 11-10-2018 AMC99_02722 063f39007ef56d99437c44c1876ae6da 538 Pfam PF07690 Major Facilitator Superfamily 33 351 2.6E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_02722 063f39007ef56d99437c44c1876ae6da 538 SUPERFAMILY SSF103473 15 516 1.57E-53 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_02226 f19c79ad23014c76a6711ee5b87af8b7 479 SUPERFAMILY SSF53187 33 477 3.01E-48 T 11-10-2018 AMC99_02226 f19c79ad23014c76a6711ee5b87af8b7 479 Pfam PF07687 Peptidase dimerisation domain 229 371 3.1E-16 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMC99_02226 f19c79ad23014c76a6711ee5b87af8b7 479 SUPERFAMILY SSF55031 235 371 1.26E-9 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMC99_02226 f19c79ad23014c76a6711ee5b87af8b7 479 Pfam PF01546 Peptidase family M20/M25/M40 114 474 7.0E-26 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMC99_00339 0c689d44defafe3b3c37898a74ec19b5 453 Pfam PF02347 Glycine cleavage system P-protein 1 445 6.1E-120 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 AMC99_00339 0c689d44defafe3b3c37898a74ec19b5 453 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 451 44.724 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 AMC99_00339 0c689d44defafe3b3c37898a74ec19b5 453 SUPERFAMILY SSF53383 1 452 6.21E-111 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_00339 0c689d44defafe3b3c37898a74ec19b5 453 PIRSF PIRSF006815 1 452 7.4E-165 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 AMC99_00339 0c689d44defafe3b3c37898a74ec19b5 453 Gene3D G3DSA:3.90.1150.10 72 448 1.1E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_00339 0c689d44defafe3b3c37898a74ec19b5 453 Gene3D G3DSA:3.40.640.10 83 351 1.1E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_00005 d7d7539ea541b9d3c3b2066a970848ac 178 SUPERFAMILY SSF52540 4 161 1.21E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00005 d7d7539ea541b9d3c3b2066a970848ac 178 Pfam PF13521 AAA domain 4 156 3.2E-30 T 11-10-2018 IPR038727 NadR/Ttd14, AAA domain AMC99_00005 d7d7539ea541b9d3c3b2066a970848ac 178 Gene3D G3DSA:3.40.50.300 2 161 2.0E-45 T 11-10-2018 AMC99_02171 7ac4403c9e567e4a7c92b26b6700cce6 265 Gene3D G3DSA:2.60.120.10 5 182 3.6E-51 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_02171 7ac4403c9e567e4a7c92b26b6700cce6 265 SUPERFAMILY SSF51182 6 222 9.15E-50 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMC99_02171 7ac4403c9e567e4a7c92b26b6700cce6 265 Pfam PF01238 Phosphomannose isomerase type I 30 69 2.6E-5 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 AMC99_00515 94f353cd0e5a339f6619016caa2b7e81 618 Gene3D G3DSA:3.40.50.12780 31 489 1.8E-102 T 11-10-2018 AMC99_00515 94f353cd0e5a339f6619016caa2b7e81 618 Pfam PF13193 AMP-binding enzyme C-terminal domain 506 583 3.9E-24 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_00515 94f353cd0e5a339f6619016caa2b7e81 618 Pfam PF00501 AMP-binding enzyme 61 496 4.8E-84 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_00515 94f353cd0e5a339f6619016caa2b7e81 618 SUPERFAMILY SSF56801 10 613 1.7E-151 T 11-10-2018 AMC99_00515 94f353cd0e5a339f6619016caa2b7e81 618 Gene3D G3DSA:3.30.300.30 492 618 1.5E-25 T 11-10-2018 AMC99_00515 94f353cd0e5a339f6619016caa2b7e81 618 ProSitePatterns PS00455 Putative AMP-binding domain signature. 233 244 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_00515 94f353cd0e5a339f6619016caa2b7e81 618 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 6 54 4.5E-10 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 AMC99_00423 8c26045356de312ff42d29279f183456 481 SUPERFAMILY SSF103473 18 456 1.02E-24 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00423 8c26045356de312ff42d29279f183456 481 Pfam PF13347 MFS/sugar transport protein 19 455 4.2E-104 T 11-10-2018 AMC99_00423 8c26045356de312ff42d29279f183456 481 Gene3D G3DSA:1.20.1250.20 17 448 5.4E-19 T 11-10-2018 AMC99_02748 0f0dff577e34fac529332405f2cb8d38 263 Gene3D G3DSA:1.20.58.480 4 263 9.6E-96 T 11-10-2018 AMC99_02748 0f0dff577e34fac529332405f2cb8d38 263 Pfam PF03301 Tryptophan 2,3-dioxygenase 190 262 3.4E-20 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMC99_02748 0f0dff577e34fac529332405f2cb8d38 263 Pfam PF03301 Tryptophan 2,3-dioxygenase 4 127 3.1E-38 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMC99_02748 0f0dff577e34fac529332405f2cb8d38 263 SUPERFAMILY SSF140959 6 262 6.15E-99 T 11-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMC99_02748 0f0dff577e34fac529332405f2cb8d38 263 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 1 263 38.547 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMC99_02004 6a378b4f2afa715255e031b0c3fa5c34 511 SUPERFAMILY SSF75304 40 497 2.88E-110 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_02004 6a378b4f2afa715255e031b0c3fa5c34 511 Pfam PF01425 Amidase 51 484 4.4E-90 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_02004 6a378b4f2afa715255e031b0c3fa5c34 511 Gene3D G3DSA:3.90.1300.10 21 505 1.6E-156 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_01276 e7e68ee4721c78567c97a7b7b005a859 294 SMART SM00646 125 280 9.0E-37 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AMC99_01276 e7e68ee4721c78567c97a7b7b005a859 294 SUPERFAMILY SSF53187 64 283 7.53E-46 T 11-10-2018 AMC99_01276 e7e68ee4721c78567c97a7b7b005a859 294 Gene3D G3DSA:3.40.630.40 57 290 1.1E-64 T 11-10-2018 AMC99_01276 e7e68ee4721c78567c97a7b7b005a859 294 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 66 279 3.2E-44 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 AMC99_00448 37dcacaf06b301a210f2dadd0797b285 475 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 467 6.0E-73 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMC99_00448 37dcacaf06b301a210f2dadd0797b285 475 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 469 3.1E-75 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 AMC99_00760 f69cfd26e629ebf85650731e1c1b23e9 109 SMART SM00450 13 106 8.8E-17 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_00760 f69cfd26e629ebf85650731e1c1b23e9 109 ProSitePatterns PS00380 Rhodanese signature 1. 38 49 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 AMC99_00760 f69cfd26e629ebf85650731e1c1b23e9 109 SUPERFAMILY SSF52821 6 108 1.7E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_00760 f69cfd26e629ebf85650731e1c1b23e9 109 Pfam PF00581 Rhodanese-like domain 14 102 1.2E-11 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_00760 f69cfd26e629ebf85650731e1c1b23e9 109 Gene3D G3DSA:3.40.250.10 5 109 9.7E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_01834 5b7bac4e7f64a43d957df95e1a7f650f 396 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 107 170 7.4E-5 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMC99_01834 5b7bac4e7f64a43d957df95e1a7f650f 396 Gene3D G3DSA:1.10.150.130 93 201 4.6E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMC99_01834 5b7bac4e7f64a43d957df95e1a7f650f 396 SUPERFAMILY SSF56349 97 352 1.0E-35 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_01834 5b7bac4e7f64a43d957df95e1a7f650f 396 Pfam PF00589 Phage integrase family 224 337 8.7E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_01834 5b7bac4e7f64a43d957df95e1a7f650f 396 Gene3D G3DSA:1.10.443.10 202 361 8.7E-14 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMC99_02328 3f3eb8818c1a9c22e7abc5bead19abd0 506 Gene3D G3DSA:3.40.309.10 266 464 4.7E-162 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_02328 3f3eb8818c1a9c22e7abc5bead19abd0 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMC99_02328 3f3eb8818c1a9c22e7abc5bead19abd0 506 SUPERFAMILY SSF53720 11 499 1.57E-161 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_02328 3f3eb8818c1a9c22e7abc5bead19abd0 506 Gene3D G3DSA:3.40.605.10 23 492 4.7E-162 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_02328 3f3eb8818c1a9c22e7abc5bead19abd0 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 7.7E-166 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_02328 3f3eb8818c1a9c22e7abc5bead19abd0 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMC99_01495 a5d270d018d404d41af6f6cd5d429e06 517 Gene3D G3DSA:2.40.160.90 382 517 1.5E-12 T 11-10-2018 AMC99_01495 a5d270d018d404d41af6f6cd5d429e06 517 Gene3D G3DSA:2.40.160.90 107 235 2.0E-11 T 11-10-2018 AMC99_01495 a5d270d018d404d41af6f6cd5d429e06 517 SUPERFAMILY SSF56925 348 499 6.98E-11 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMC99_01495 a5d270d018d404d41af6f6cd5d429e06 517 SUPERFAMILY SSF56925 85 215 1.02E-9 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMC99_01102 2c51609b2111b6ac34d53d962a9eea30 538 Pfam PF04389 Peptidase family M28 287 502 5.1E-32 T 11-10-2018 IPR007484 Peptidase M28 AMC99_01102 2c51609b2111b6ac34d53d962a9eea30 538 Gene3D G3DSA:3.40.630.10 27 162 3.4E-7 T 11-10-2018 AMC99_01102 2c51609b2111b6ac34d53d962a9eea30 538 Gene3D G3DSA:3.40.630.10 247 519 2.3E-62 T 11-10-2018 AMC99_01102 2c51609b2111b6ac34d53d962a9eea30 538 SUPERFAMILY SSF53187 48 512 9.63E-55 T 11-10-2018 AMC99_00398 4900e656735fe0400859f63675bff626 115 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 16 100 6.4E-7 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AMC99_00398 4900e656735fe0400859f63675bff626 115 SUPERFAMILY SSF69754 14 97 1.06E-6 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 Gene3D G3DSA:3.30.830.10 535 741 2.6E-18 T 11-10-2018 AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 SUPERFAMILY SSF63411 513 740 2.79E-26 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 SUPERFAMILY SSF63411 770 943 3.17E-23 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 Pfam PF05193 Peptidase M16 inactive domain 222 399 1.2E-12 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 Pfam PF05193 Peptidase M16 inactive domain 713 874 4.1E-14 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 80 103 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 Gene3D G3DSA:3.30.830.10 49 265 4.5E-58 T 11-10-2018 AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 Pfam PF00675 Insulinase (Peptidase family M16) 60 183 7.2E-27 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 Gene3D G3DSA:3.30.830.10 307 466 1.4E-8 T 11-10-2018 AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 SUPERFAMILY SSF63411 46 259 2.44E-42 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 Gene3D G3DSA:3.30.830.10 756 947 1.7E-26 T 11-10-2018 AMC99_01722 a1ee8a978a2be2617e163d9846497188 950 SUPERFAMILY SSF63411 313 456 4.83E-5 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_00135 e64de7e19229952774fbf2d8bde2bad3 86 Pfam PF02597 ThiS family 25 86 2.5E-12 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMC99_00135 e64de7e19229952774fbf2d8bde2bad3 86 Gene3D G3DSA:3.10.20.30 6 86 5.3E-14 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_00135 e64de7e19229952774fbf2d8bde2bad3 86 SUPERFAMILY SSF54285 8 86 1.53E-12 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMC99_01152 8c5e5f45db9661a1084987b516ca2e30 347 PIRSF PIRSF005485 6 347 2.9E-101 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMC99_01152 8c5e5f45db9661a1084987b516ca2e30 347 Gene3D G3DSA:3.30.390.60 134 233 5.2E-32 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily AMC99_01152 8c5e5f45db9661a1084987b516ca2e30 347 Gene3D G3DSA:3.30.450.40 110 346 5.2E-32 T 11-10-2018 IPR029016 GAF-like domain superfamily AMC99_01152 8c5e5f45db9661a1084987b516ca2e30 347 SUPERFAMILY SSF55781 79 346 4.76E-54 T 11-10-2018 AMC99_01152 8c5e5f45db9661a1084987b516ca2e30 347 Gene3D G3DSA:1.10.10.10 4 92 5.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01152 8c5e5f45db9661a1084987b516ca2e30 347 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 8 339 27.957 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMC99_01152 8c5e5f45db9661a1084987b516ca2e30 347 SUPERFAMILY SSF46785 8 90 7.44E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01152 8c5e5f45db9661a1084987b516ca2e30 347 Pfam PF01628 HrcA protein C terminal domain 110 332 7.1E-54 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 AMC99_01152 8c5e5f45db9661a1084987b516ca2e30 347 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 10 345 4.0E-89 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMC99_01563 ebab588d7ab3da7cfd8451ff5d2eef46 490 PRINTS PR00811 Bacterial general secretion pathway protein D signature 396 414 5.5E-15 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01563 ebab588d7ab3da7cfd8451ff5d2eef46 490 PRINTS PR00811 Bacterial general secretion pathway protein D signature 419 433 5.5E-15 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01563 ebab588d7ab3da7cfd8451ff5d2eef46 490 PRINTS PR00811 Bacterial general secretion pathway protein D signature 256 280 5.5E-15 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01563 ebab588d7ab3da7cfd8451ff5d2eef46 490 PRINTS PR00811 Bacterial general secretion pathway protein D signature 175 185 5.5E-15 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01563 ebab588d7ab3da7cfd8451ff5d2eef46 490 Pfam PF04972 BON domain 124 169 1.9E-6 T 11-10-2018 IPR007055 BON domain AMC99_01563 ebab588d7ab3da7cfd8451ff5d2eef46 490 Pfam PF13629 Pilus formation protein N terminal region 39 108 1.4E-19 T 11-10-2018 IPR032789 Pilus formation protein, N-terminal AMC99_01563 ebab588d7ab3da7cfd8451ff5d2eef46 490 Pfam PF00263 Bacterial type II and III secretion system protein 261 432 3.4E-45 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMC99_01546 b307662ccd764834761a0003b9d59d1c 287 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 209 34.774 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01546 b307662ccd764834761a0003b9d59d1c 287 Pfam PF00297 Ribosomal protein L3 99 184 1.5E-15 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01546 b307662ccd764834761a0003b9d59d1c 287 SUPERFAMILY SSF50447 1 214 1.06E-81 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_01546 b307662ccd764834761a0003b9d59d1c 287 ProSitePatterns PS00474 Ribosomal protein L3 signature. 103 126 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site AMC99_01546 b307662ccd764834761a0003b9d59d1c 287 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 6.9E-83 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01546 b307662ccd764834761a0003b9d59d1c 287 Gene3D G3DSA:2.40.50.620 32 98 2.4E-26 T 11-10-2018 AMC99_01546 b307662ccd764834761a0003b9d59d1c 287 Gene3D G3DSA:2.40.30.10 123 211 9.4E-17 T 11-10-2018 AMC99_01277 433e4f5de625b78436b033dc126ac024 930 Pfam PF10150 Ribonuclease E/G family 250 520 7.3E-94 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMC99_01277 433e4f5de625b78436b033dc126ac024 930 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 548 3.1E-156 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AMC99_01277 433e4f5de625b78436b033dc126ac024 930 Gene3D G3DSA:3.40.1260.20 530 631 6.7E-23 T 11-10-2018 AMC99_01277 433e4f5de625b78436b033dc126ac024 930 SUPERFAMILY SSF50249 40 254 4.33E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01277 433e4f5de625b78436b033dc126ac024 930 Hamap MF_00970 Ribonuclease E [rne]. 2 927 29.746 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 AMC99_01277 433e4f5de625b78436b033dc126ac024 930 Gene3D G3DSA:2.40.50.140 36 131 2.7E-24 T 11-10-2018 AMC99_01277 433e4f5de625b78436b033dc126ac024 930 Gene3D G3DSA:2.40.50.140 139 248 3.4E-12 T 11-10-2018 AMC99_01277 433e4f5de625b78436b033dc126ac024 930 Pfam PF00575 S1 RNA binding domain 37 82 3.9E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 AMC99_01619 b31188579323758a7cf759e56a89b166 154 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 45 62 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AMC99_01619 b31188579323758a7cf759e56a89b166 154 SUPERFAMILY SSF50891 10 153 1.75E-47 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMC99_01619 b31188579323758a7cf759e56a89b166 154 Gene3D G3DSA:2.40.100.10 1 153 3.4E-48 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily AMC99_01619 b31188579323758a7cf759e56a89b166 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 62 2.9E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01619 b31188579323758a7cf759e56a89b166 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 2.9E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01619 b31188579323758a7cf759e56a89b166 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 117 2.9E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01619 b31188579323758a7cf759e56a89b166 154 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.9E-13 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01619 b31188579323758a7cf759e56a89b166 154 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 9 152 1.0E-43 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 AMC99_01619 b31188579323758a7cf759e56a89b166 154 PIRSF PIRSF001467 1 153 4.6E-30 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 AMC99_02076 bc0ad5e357c8231facaf888b6bad7788 378 Gene3D G3DSA:3.40.50.10540 18 335 1.7E-103 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_02076 bc0ad5e357c8231facaf888b6bad7788 378 Gene3D G3DSA:3.30.1540.10 232 320 1.7E-103 T 11-10-2018 AMC99_02076 bc0ad5e357c8231facaf888b6bad7788 378 Pfam PF02515 CoA-transferase family III 19 354 4.5E-70 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMC99_02076 bc0ad5e357c8231facaf888b6bad7788 378 SUPERFAMILY SSF89796 17 359 3.01E-97 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_01941 a36518cd3e6cf784ba10ada856985b03 391 Gene3D G3DSA:2.40.110.10 132 243 1.5E-38 T 11-10-2018 AMC99_01941 a36518cd3e6cf784ba10ada856985b03 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 226 5.1E-22 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_01941 a36518cd3e6cf784ba10ada856985b03 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 386 6.3E-42 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_01941 a36518cd3e6cf784ba10ada856985b03 391 Gene3D G3DSA:1.20.140.10 244 387 2.1E-42 T 11-10-2018 AMC99_01941 a36518cd3e6cf784ba10ada856985b03 391 SUPERFAMILY SSF47203 237 389 2.42E-43 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_01941 a36518cd3e6cf784ba10ada856985b03 391 Gene3D G3DSA:1.10.540.10 13 131 1.8E-35 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_01941 a36518cd3e6cf784ba10ada856985b03 391 SUPERFAMILY SSF56645 6 251 4.32E-74 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_01941 a36518cd3e6cf784ba10ada856985b03 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 129 4.4E-26 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 ProSitePatterns PS00177 DNA topoisomerase II signature. 440 448 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 287 300 6.2E-63 T 11-10-2018 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 504 520 6.2E-63 T 11-10-2018 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 438 452 6.2E-63 T 11-10-2018 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 542 554 6.2E-63 T 11-10-2018 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 522 539 6.2E-63 T 11-10-2018 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 80 93 6.2E-63 T 11-10-2018 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 124 138 6.2E-63 T 11-10-2018 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 584 600 6.2E-63 T 11-10-2018 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR00418 DNA topoisomerase II family signature 45 60 6.2E-63 T 11-10-2018 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 13 653 42.882 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 15 648 2.1E-231 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 Pfam PF00204 DNA gyrase B 238 407 3.7E-41 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 605 617 1.4E-12 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 16 26 1.4E-12 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 488 497 1.4E-12 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 329 345 1.4E-12 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 377 391 1.4E-12 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 PRINTS PR01159 DNA gyrase subunit B signature 391 411 1.4E-12 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 186 4.5E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 Pfam PF01751 Toprim domain 437 535 1.1E-17 T 11-10-2018 IPR006171 TOPRIM domain AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 580 645 1.1E-23 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 SUPERFAMILY SSF54211 238 408 3.98E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 Gene3D G3DSA:3.30.565.10 13 223 1.5E-71 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 SUPERFAMILY SSF56719 417 650 1.46E-76 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 Gene3D G3DSA:3.40.50.670 417 658 1.2E-87 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 SUPERFAMILY SSF55874 16 217 3.41E-58 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 Gene3D G3DSA:3.30.230.10 238 412 1.9E-44 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 SMART SM00433 45 649 1.7E-264 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AMC99_01141 0b051c4dec9f8d8fb61b88f43198111c 658 SMART SM00387 41 187 3.8E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01381 13bb3c535ca8db7d5917731f85716424 360 Pfam PF11017 Protein of unknown function (DUF2855) 37 350 1.4E-95 T 11-10-2018 IPR021276 Protein of unknown function DUF2855 AMC99_01381 13bb3c535ca8db7d5917731f85716424 360 SUPERFAMILY SSF50129 12 100 3.77E-5 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_02165 e818898496cbbd249c45158a3417e2f3 85 Gene3D G3DSA:1.10.260.40 1 74 5.4E-17 T 11-10-2018 AMC99_02165 e818898496cbbd249c45158a3417e2f3 85 SMART SM00530 10 65 1.8E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_02165 e818898496cbbd249c45158a3417e2f3 85 SUPERFAMILY SSF47413 3 63 9.12E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_02165 e818898496cbbd249c45158a3417e2f3 85 Pfam PF01381 Helix-turn-helix 11 63 1.4E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_02165 e818898496cbbd249c45158a3417e2f3 85 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 6 62 3.6E-23 T 11-10-2018 IPR017507 Transcription regulator, HipB-like AMC99_02322 eb00f9a0deccc8f80cd26f708b38ffb3 512 SUPERFAMILY SSF161098 15 203 5.23E-29 T 11-10-2018 IPR035906 MetI-like superfamily AMC99_02322 eb00f9a0deccc8f80cd26f708b38ffb3 512 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 248 507 6.8E-43 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 AMC99_02322 eb00f9a0deccc8f80cd26f708b38ffb3 512 SUPERFAMILY SSF53850 248 507 1.01E-52 T 11-10-2018 AMC99_02322 eb00f9a0deccc8f80cd26f708b38ffb3 512 Gene3D G3DSA:1.10.3720.10 11 215 5.5E-23 T 11-10-2018 IPR035906 MetI-like superfamily AMC99_02322 eb00f9a0deccc8f80cd26f708b38ffb3 512 Gene3D G3DSA:3.40.190.120 348 450 4.0E-65 T 11-10-2018 AMC99_02322 eb00f9a0deccc8f80cd26f708b38ffb3 512 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 211 4.7E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMC99_02322 eb00f9a0deccc8f80cd26f708b38ffb3 512 Gene3D G3DSA:3.40.190.10 250 506 4.0E-65 T 11-10-2018 AMC99_02493 4eb109a14c959225bc908dcfa52c16dd 408 Gene3D G3DSA:3.40.640.10 36 295 8.5E-160 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_02493 4eb109a14c959225bc908dcfa52c16dd 408 SUPERFAMILY SSF53383 9 399 1.2E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_02493 4eb109a14c959225bc908dcfa52c16dd 408 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 9 404 5.1E-162 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMC99_02493 4eb109a14c959225bc908dcfa52c16dd 408 Pfam PF00266 Aminotransferase class-V 26 391 5.7E-137 T 11-10-2018 IPR000192 Aminotransferase class V domain AMC99_02493 4eb109a14c959225bc908dcfa52c16dd 408 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMC99_02493 4eb109a14c959225bc908dcfa52c16dd 408 Gene3D G3DSA:3.90.1150.10 10 395 8.5E-160 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_01879 203eda28cdeaf9e551b150bc97992ce0 205 Gene3D G3DSA:1.10.1670.40 14 197 1.2E-52 T 11-10-2018 AMC99_01879 203eda28cdeaf9e551b150bc97992ce0 205 SUPERFAMILY SSF48150 37 200 5.76E-37 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMC99_01879 203eda28cdeaf9e551b150bc97992ce0 205 Gene3D G3DSA:1.10.340.30 39 148 1.2E-52 T 11-10-2018 AMC99_01879 203eda28cdeaf9e551b150bc97992ce0 205 SMART SM00478 49 203 3.1E-5 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_01879 203eda28cdeaf9e551b150bc97992ce0 205 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 46 187 5.6E-16 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 252 5.0E-30 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 SUPERFAMILY SSF55979 255 375 1.1E-34 T 11-10-2018 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 SUPERFAMILY SSF55979 128 253 4.85E-24 T 11-10-2018 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 SMART SM00480 17 371 2.1E-121 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 Gene3D G3DSA:3.10.150.10 1 251 7.0E-120 T 11-10-2018 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 PIRSF PIRSF000804 1 375 1.7E-117 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 Gene3D G3DSA:3.70.10.10 139 373 7.0E-120 T 11-10-2018 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 374 8.3E-89 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 255 374 8.7E-30 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.5E-33 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AMC99_01382 64782ad3140fe7861a17410fd051589d 375 SUPERFAMILY SSF55979 1 118 2.47E-26 T 11-10-2018 AMC99_02015 d23790f1911c431cf0bcd66e5d26bf3b 442 SUPERFAMILY SSF110997 347 420 3.01E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMC99_02015 d23790f1911c431cf0bcd66e5d26bf3b 442 Pfam PF05036 Sporulation related domain 347 422 4.0E-8 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMC99_02015 d23790f1911c431cf0bcd66e5d26bf3b 442 Gene3D G3DSA:1.25.40.10 32 230 6.0E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02015 d23790f1911c431cf0bcd66e5d26bf3b 442 SUPERFAMILY SSF48452 36 188 2.85E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02015 d23790f1911c431cf0bcd66e5d26bf3b 442 SMART SM00028 70 103 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_02015 d23790f1911c431cf0bcd66e5d26bf3b 442 SMART SM00028 36 69 4.4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_02015 d23790f1911c431cf0bcd66e5d26bf3b 442 SMART SM00028 167 200 250.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_00133 204282fb9233c9e22a44f481c2f39835 270 SUPERFAMILY SSF54534 105 211 2.88E-20 T 11-10-2018 AMC99_00133 204282fb9233c9e22a44f481c2f39835 270 Gene3D G3DSA:3.10.50.40 113 216 9.1E-25 T 11-10-2018 AMC99_00133 204282fb9233c9e22a44f481c2f39835 270 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 153 173 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 AMC99_00133 204282fb9233c9e22a44f481c2f39835 270 Gene3D G3DSA:1.10.4030.30 74 224 9.1E-25 T 11-10-2018 AMC99_00133 204282fb9233c9e22a44f481c2f39835 270 SUPERFAMILY SSF109998 7 126 1.49E-9 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMC99_00133 204282fb9233c9e22a44f481c2f39835 270 Pfam PF00639 PPIC-type PPIASE domain 119 211 4.6E-17 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AMC99_01955 ea85a1e836907ce104a968a8cfdd0c86 188 Pfam PF09351 Domain of unknown function (DUF1993) 6 173 3.9E-43 T 11-10-2018 IPR018531 Protein of unknown function DUF1993 AMC99_01955 ea85a1e836907ce104a968a8cfdd0c86 188 Gene3D G3DSA:1.20.120.450 1 174 2.3E-42 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMC99_01955 ea85a1e836907ce104a968a8cfdd0c86 188 SUPERFAMILY SSF109854 3 177 3.57E-42 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes AMC99_00320 6413d6e24fd98c2ca0b154e751f9a37b 129 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 46 125 4.0E-35 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 AMC99_00320 6413d6e24fd98c2ca0b154e751f9a37b 129 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 30 124 28.769 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMC99_00320 6413d6e24fd98c2ca0b154e751f9a37b 129 Gene3D G3DSA:3.30.1390.10 27 129 8.3E-44 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_00320 6413d6e24fd98c2ca0b154e751f9a37b 129 SUPERFAMILY SSF54736 44 128 5.75E-33 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_02228 135a8e6282cb96952ebd5f7a8cbe9a21 286 SUPERFAMILY SSF53335 66 250 5.63E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02228 135a8e6282cb96952ebd5f7a8cbe9a21 286 PIRSF PIRSF031679 1 286 8.4E-64 T 11-10-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted AMC99_02228 135a8e6282cb96952ebd5f7a8cbe9a21 286 Gene3D G3DSA:3.40.50.150 38 245 1.2E-12 T 11-10-2018 AMC99_00573 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 SUPERFAMILY SSF53686 1 461 1.08E-154 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_00573 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 TIGRFAM TIGR00260 thrC: threonine synthase 69 426 2.9E-77 T 11-10-2018 IPR004450 Threonine synthase-like AMC99_00573 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Pfam PF14821 Threonine synthase N terminus 3 80 3.2E-26 T 11-10-2018 IPR029144 Threonine synthase, N-terminal AMC99_00573 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Gene3D G3DSA:3.40.50.1100 108 442 1.4E-143 T 11-10-2018 AMC99_00573 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMC99_00573 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 410 4.2E-18 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMC99_00573 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Gene3D G3DSA:3.40.50.1100 97 430 1.4E-143 T 11-10-2018 AMC99_00573 ca6f8cff5dcc77ce34034c7e1c68f7e8 466 Gene3D G3DSA:3.90.1380.10 1 86 8.8E-28 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily AMC99_00302 596680c2b511e20cf8c6228dacf83766 269 Gene3D G3DSA:3.40.1190.20 1 267 2.6E-97 T 11-10-2018 IPR029056 Ribokinase-like AMC99_00302 596680c2b511e20cf8c6228dacf83766 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 262 1.3E-82 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMC99_00302 596680c2b511e20cf8c6228dacf83766 269 SUPERFAMILY SSF53613 3 263 3.74E-76 T 11-10-2018 IPR029056 Ribokinase-like AMC99_00302 596680c2b511e20cf8c6228dacf83766 269 Pfam PF08543 Phosphomethylpyrimidine kinase 14 260 5.7E-88 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AMC99_01817 60527e72e951b3d4430f40c00935cc51 439 Gene3D G3DSA:1.10.3710.10 343 438 1.1E-28 T 11-10-2018 AMC99_01817 60527e72e951b3d4430f40c00935cc51 439 Pfam PF16193 AAA C-terminal domain 191 264 1.6E-17 T 11-10-2018 IPR032423 AAA C-terminal domain AMC99_01817 60527e72e951b3d4430f40c00935cc51 439 SMART SM00382 57 175 4.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01817 60527e72e951b3d4430f40c00935cc51 439 Gene3D G3DSA:1.20.272.10 239 342 4.5E-42 T 11-10-2018 AMC99_01817 60527e72e951b3d4430f40c00935cc51 439 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 61 169 8.6E-15 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_01817 60527e72e951b3d4430f40c00935cc51 439 SUPERFAMILY SSF48019 250 434 5.1E-70 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AMC99_01817 60527e72e951b3d4430f40c00935cc51 439 SUPERFAMILY SSF52540 21 225 4.95E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01817 60527e72e951b3d4430f40c00935cc51 439 Pfam PF12002 MgsA AAA+ ATPase C terminal 265 430 3.9E-62 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal AMC99_01817 60527e72e951b3d4430f40c00935cc51 439 Gene3D G3DSA:3.40.50.300 14 171 4.3E-40 T 11-10-2018 AMC99_02780 974bf85e7d0222244c5275535e37dfa8 385 SUPERFAMILY SSF89796 12 384 2.22E-127 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_02780 974bf85e7d0222244c5275535e37dfa8 385 Gene3D G3DSA:3.30.1540.10 242 333 4.9E-135 T 11-10-2018 AMC99_02780 974bf85e7d0222244c5275535e37dfa8 385 Pfam PF02515 CoA-transferase family III 13 382 5.8E-119 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMC99_02780 974bf85e7d0222244c5275535e37dfa8 385 Gene3D G3DSA:3.40.50.10540 12 366 4.9E-135 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_01536 bff91ead94d39872958ae1b586b976a2 119 Pfam PF00238 Ribosomal protein L14p/L23e 1 119 2.5E-53 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMC99_01536 bff91ead94d39872958ae1b586b976a2 119 ProSitePatterns PS00049 Ribosomal protein L14 signature. 57 83 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01536 bff91ead94d39872958ae1b586b976a2 119 SUPERFAMILY SSF50193 1 118 2.09E-50 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_01536 bff91ead94d39872958ae1b586b976a2 119 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 119 25.462 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMC99_01536 bff91ead94d39872958ae1b586b976a2 119 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 119 1.6E-56 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMC99_01536 bff91ead94d39872958ae1b586b976a2 119 SMART SM01374 1 119 1.6E-79 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMC99_01536 bff91ead94d39872958ae1b586b976a2 119 Gene3D G3DSA:2.40.150.20 1 119 1.9E-53 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_00974 61881977c71504ff0688c0f90146796f 435 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 16 55 3.8E-21 T 11-10-2018 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 AMC99_00974 61881977c71504ff0688c0f90146796f 435 Pfam PF00676 Dehydrogenase E1 component 95 388 3.3E-93 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMC99_00974 61881977c71504ff0688c0f90146796f 435 SUPERFAMILY SSF52518 59 418 1.23E-95 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_00974 61881977c71504ff0688c0f90146796f 435 Gene3D G3DSA:3.40.50.970 14 419 5.4E-124 T 11-10-2018 AMC99_02501 a0719e90e975b07af1aece6387a8f219 307 Pfam PF12833 Helix-turn-helix domain 202 277 2.3E-9 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_02501 a0719e90e975b07af1aece6387a8f219 307 SMART SM00342 195 279 0.001 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_02501 a0719e90e975b07af1aece6387a8f219 307 Gene3D G3DSA:1.10.10.60 180 280 5.7E-11 T 11-10-2018 AMC99_02095 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 SUPERFAMILY SSF47203 247 401 1.03E-41 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_02095 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 SUPERFAMILY SSF56645 3 261 6.41E-65 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_02095 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Gene3D G3DSA:1.10.540.10 5 132 3.0E-50 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_02095 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 236 4.3E-19 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_02095 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 130 7.6E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_02095 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Gene3D G3DSA:1.20.140.10 249 406 1.9E-39 T 11-10-2018 AMC99_02095 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Gene3D G3DSA:2.40.110.10 134 248 1.0E-44 T 11-10-2018 AMC99_02095 f4e7a1bed2e0e936dd9ffed9f4a887e2 408 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 248 397 1.7E-36 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_02082 a1c61f43353ed04e70c4a24b0fa4f0eb 299 SUPERFAMILY SSF56281 59 290 4.59E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_02082 a1c61f43353ed04e70c4a24b0fa4f0eb 299 Pfam PF00753 Metallo-beta-lactamase superfamily 60 273 1.0E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_02082 a1c61f43353ed04e70c4a24b0fa4f0eb 299 Gene3D G3DSA:3.60.15.10 2 295 4.0E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_02082 a1c61f43353ed04e70c4a24b0fa4f0eb 299 SMART SM00849 57 273 7.7E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_02562 6f1e7eb94a1569e1034ef8c706f450b3 596 SUPERFAMILY SSF47203 303 477 9.5E-43 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_02562 6f1e7eb94a1569e1034ef8c706f450b3 596 Gene3D G3DSA:2.40.110.10 176 303 4.4E-93 T 11-10-2018 AMC99_02562 6f1e7eb94a1569e1034ef8c706f450b3 596 Gene3D G3DSA:1.20.140.10 304 463 4.4E-93 T 11-10-2018 AMC99_02562 6f1e7eb94a1569e1034ef8c706f450b3 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 494 590 1.0E-11 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMC99_02562 6f1e7eb94a1569e1034ef8c706f450b3 596 SUPERFAMILY SSF56645 54 291 9.69E-54 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_02562 6f1e7eb94a1569e1034ef8c706f450b3 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 304 466 1.3E-23 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_02562 6f1e7eb94a1569e1034ef8c706f450b3 596 Gene3D G3DSA:1.10.540.10 64 175 4.4E-93 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_02562 6f1e7eb94a1569e1034ef8c706f450b3 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 55 172 2.2E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_02562 6f1e7eb94a1569e1034ef8c706f450b3 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 290 2.0E-13 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_02523 4629512c35c67196e933346afd4630b9 506 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 328 487 3.7E-47 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMC99_02523 4629512c35c67196e933346afd4630b9 506 Pfam PF05683 Fumarase C-terminus 291 489 2.4E-75 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 AMC99_02523 4629512c35c67196e933346afd4630b9 506 Gene3D G3DSA:3.20.130.10 308 489 7.8E-59 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AMC99_02523 4629512c35c67196e933346afd4630b9 506 Pfam PF05681 Fumarate hydratase (Fumerase) 14 287 6.3E-96 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMC99_02523 4629512c35c67196e933346afd4630b9 506 PIRSF PIRSF001394 1 504 2.2E-196 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 AMC99_02523 4629512c35c67196e933346afd4630b9 506 SUPERFAMILY SSF117457 319 488 7.72E-61 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 AMC99_02523 4629512c35c67196e933346afd4630b9 506 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 13 287 1.6E-61 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 AMC99_02500 5893b0c3122ace1f40f30d3dbeae1a83 299 Pfam PF12833 Helix-turn-helix domain 190 263 1.4E-8 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_02500 5893b0c3122ace1f40f30d3dbeae1a83 299 Gene3D G3DSA:1.10.10.60 166 268 3.9E-10 T 11-10-2018 AMC99_02657 c4b2f7c2c8236e08acce0c91f70f5558 509 PIRSF PIRSF026631 3 506 1.1E-59 T 11-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 AMC99_02657 c4b2f7c2c8236e08acce0c91f70f5558 509 Pfam PF03703 Bacterial PH domain 65 143 3.8E-19 T 11-10-2018 IPR005182 Domain of unknown function DUF304 AMC99_02657 c4b2f7c2c8236e08acce0c91f70f5558 509 Pfam PF03703 Bacterial PH domain 420 496 2.9E-6 T 11-10-2018 IPR005182 Domain of unknown function DUF304 AMC99_02569 30187cd8db18c0f49468703a18a07787 544 Pfam PF01551 Peptidase family M23 388 482 1.6E-32 T 11-10-2018 IPR016047 Peptidase M23 AMC99_02569 30187cd8db18c0f49468703a18a07787 544 Gene3D G3DSA:3.10.450.350 268 503 6.6E-64 T 11-10-2018 AMC99_02569 30187cd8db18c0f49468703a18a07787 544 SUPERFAMILY SSF51261 248 483 3.56E-61 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_02569 30187cd8db18c0f49468703a18a07787 544 Gene3D G3DSA:2.70.70.10 360 488 6.6E-64 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_00066 3083672aa6a87d11bc298e74c92c325b 260 TIGRFAM TIGR02740 TraF-like: TraF-like protein 5 255 3.6E-70 T 11-10-2018 IPR014111 Type IV conjugative transfer system protein TraF-like AMC99_00066 3083672aa6a87d11bc298e74c92c325b 260 SUPERFAMILY SSF52833 143 252 1.95E-7 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00066 3083672aa6a87d11bc298e74c92c325b 260 Pfam PF13728 F plasmid transfer operon protein 36 249 2.1E-71 T 11-10-2018 IPR039555 F plasmid transfer operon protein AMC99_01298 d8e9e2451d557c1e05741dca910dd870 507 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 7 499 6.4E-100 T 11-10-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant AMC99_01298 d8e9e2451d557c1e05741dca910dd870 507 Pfam PF02706 Chain length determinant protein 13 91 2.7E-7 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 AMC99_02587 21c0a3ff6bb67eb2fb663b94e0729d96 425 Gene3D G3DSA:3.40.605.10 28 419 3.3E-151 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_02587 21c0a3ff6bb67eb2fb663b94e0729d96 425 SUPERFAMILY SSF53720 15 424 1.26E-105 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_02587 21c0a3ff6bb67eb2fb663b94e0729d96 425 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 24 414 1.4E-134 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_02587 21c0a3ff6bb67eb2fb663b94e0729d96 425 Pfam PF00171 Aldehyde dehydrogenase family 14 279 2.9E-9 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_02587 21c0a3ff6bb67eb2fb663b94e0729d96 425 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 15 424 38.864 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_02587 21c0a3ff6bb67eb2fb663b94e0729d96 425 Gene3D G3DSA:3.40.309.10 236 382 3.3E-151 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_02587 21c0a3ff6bb67eb2fb663b94e0729d96 425 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 331 352 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_02587 21c0a3ff6bb67eb2fb663b94e0729d96 425 PIRSF PIRSF000151 8 425 2.6E-161 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMC99_02773 8893b8925cfa2e6421a3d87ab329076c 653 PIRSF PIRSF016493 57 650 4.8E-120 T 11-10-2018 IPR024191 Peptidase M61 AMC99_02773 8893b8925cfa2e6421a3d87ab329076c 653 Gene3D G3DSA:2.30.42.10 538 625 2.4E-5 T 11-10-2018 AMC99_02773 8893b8925cfa2e6421a3d87ab329076c 653 SUPERFAMILY SSF55486 255 513 3.66E-5 T 11-10-2018 AMC99_02773 8893b8925cfa2e6421a3d87ab329076c 653 Gene3D G3DSA:2.60.40.3650 59 236 1.3E-9 T 11-10-2018 AMC99_02773 8893b8925cfa2e6421a3d87ab329076c 653 Gene3D G3DSA:1.10.390.60 250 510 5.5E-64 T 11-10-2018 AMC99_02773 8893b8925cfa2e6421a3d87ab329076c 653 SUPERFAMILY SSF50156 544 623 4.29E-9 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMC99_02773 8893b8925cfa2e6421a3d87ab329076c 653 Pfam PF05299 M61 glycyl aminopeptidase 327 443 8.0E-34 T 11-10-2018 IPR007963 Peptidase M61, catalytic domain AMC99_00346 f4895c196f4e2f8d91f3e6c20ece775e 309 SUPERFAMILY SSF88713 15 254 5.84E-30 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_00346 f4895c196f4e2f8d91f3e6c20ece775e 309 Gene3D G3DSA:3.20.20.370 9 254 3.0E-33 T 11-10-2018 AMC99_00346 f4895c196f4e2f8d91f3e6c20ece775e 309 Pfam PF01522 Polysaccharide deacetylase 15 136 1.0E-18 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMC99_00887 ecb01b83f8d853f982bc7d1db88c3ce9 144 Gene3D G3DSA:1.20.120.550 4 140 5.0E-11 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMC99_00887 ecb01b83f8d853f982bc7d1db88c3ce9 144 SUPERFAMILY SSF161084 5 135 6.08E-20 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMC99_00887 ecb01b83f8d853f982bc7d1db88c3ce9 144 Pfam PF01124 MAPEG family 8 137 6.2E-24 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMC99_00852 7414438b5e2c54fb166cb8113748a347 157 Gene3D G3DSA:1.10.1200.120 1 146 1.1E-37 T 11-10-2018 IPR036019 Gated mechanosensitive channel AMC99_00852 7414438b5e2c54fb166cb8113748a347 157 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 145 22.861 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMC99_00852 7414438b5e2c54fb166cb8113748a347 157 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 144 1.0E-32 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMC99_00852 7414438b5e2c54fb166cb8113748a347 157 SUPERFAMILY SSF81330 11 139 1.96E-31 T 11-10-2018 IPR036019 Gated mechanosensitive channel AMC99_00852 7414438b5e2c54fb166cb8113748a347 157 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 144 2.5E-41 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L AMC99_00852 7414438b5e2c54fb166cb8113748a347 157 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 9.4E-9 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMC99_00852 7414438b5e2c54fb166cb8113748a347 157 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 9.4E-9 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMC99_00852 7414438b5e2c54fb166cb8113748a347 157 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 9.4E-9 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 AMC99_02400 4b330a023a242d75daa5608465138f66 226 SUPERFAMILY SSF51261 64 205 1.2E-59 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_02400 4b330a023a242d75daa5608465138f66 226 Pfam PF01551 Peptidase family M23 107 201 4.4E-35 T 11-10-2018 IPR016047 Peptidase M23 AMC99_02400 4b330a023a242d75daa5608465138f66 226 Gene3D G3DSA:2.70.70.10 80 207 1.7E-54 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_01251 0a75868ecbf3d6769125163914529087 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_01251 0a75868ecbf3d6769125163914529087 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_01251 0a75868ecbf3d6769125163914529087 161 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 139 3.1E-51 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01251 0a75868ecbf3d6769125163914529087 161 Gene3D G3DSA:3.30.70.3270 35 160 5.2E-43 T 11-10-2018 AMC99_01251 0a75868ecbf3d6769125163914529087 161 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 9 158 28.507 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01251 0a75868ecbf3d6769125163914529087 161 SUPERFAMILY SSF54862 35 144 1.38E-28 T 11-10-2018 AMC99_01251 0a75868ecbf3d6769125163914529087 161 Pfam PF12838 4Fe-4S dicluster domain 61 115 4.0E-13 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_01541 70dda7ee7efc40bbe758677df9f7738b 125 Gene3D G3DSA:3.90.470.10 11 125 4.6E-37 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_01541 70dda7ee7efc40bbe758677df9f7738b 125 SUPERFAMILY SSF54843 10 124 3.4E-36 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AMC99_01541 70dda7ee7efc40bbe758677df9f7738b 125 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 19 119 6.7E-29 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01541 70dda7ee7efc40bbe758677df9f7738b 125 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 22.786 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01541 70dda7ee7efc40bbe758677df9f7738b 125 Pfam PF00237 Ribosomal protein L22p/L17e 18 119 1.7E-29 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMC99_00787 37296eff6af0eedacdb22123f0b56f98 168 SUPERFAMILY SSF75169 12 166 1.26E-19 T 11-10-2018 IPR027396 DsrEFH-like AMC99_00787 37296eff6af0eedacdb22123f0b56f98 168 Gene3D G3DSA:3.40.1260.10 9 168 3.7E-42 T 11-10-2018 IPR027396 DsrEFH-like AMC99_00787 37296eff6af0eedacdb22123f0b56f98 168 Pfam PF13686 DsrE/DsrF/DrsH-like family 11 166 1.1E-51 T 11-10-2018 IPR032836 DsrE2-like family AMC99_00577 cd614ecb77312ed3422cb9485656664d 345 Pfam PF13353 4Fe-4S single cluster domain 34 138 7.3E-7 T 11-10-2018 AMC99_00577 cd614ecb77312ed3422cb9485656664d 345 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 18 345 39.506 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00577 cd614ecb77312ed3422cb9485656664d 345 Gene3D G3DSA:3.20.20.70 15 345 9.2E-87 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00577 cd614ecb77312ed3422cb9485656664d 345 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 33 44 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00577 cd614ecb77312ed3422cb9485656664d 345 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 18 345 1.9E-109 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00577 cd614ecb77312ed3422cb9485656664d 345 Pfam PF04055 Radical SAM superfamily 32 192 7.7E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_00577 cd614ecb77312ed3422cb9485656664d 345 Pfam PF06463 Molybdenum Cofactor Synthesis C 200 325 7.1E-38 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 AMC99_00577 cd614ecb77312ed3422cb9485656664d 345 SUPERFAMILY SSF102114 17 289 3.4E-73 T 11-10-2018 AMC99_00577 cd614ecb77312ed3422cb9485656664d 345 SMART SM00729 27 231 7.9E-6 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_02567 eb192dd1a9a2eb0c6609077cc8328958 96 Pfam PF01479 S4 domain 1 47 3.2E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_02567 eb192dd1a9a2eb0c6609077cc8328958 96 SUPERFAMILY SSF55174 1 84 4.97E-15 T 11-10-2018 AMC99_02567 eb192dd1a9a2eb0c6609077cc8328958 96 Gene3D G3DSA:3.10.290.10 1 94 9.4E-23 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMC99_02567 eb192dd1a9a2eb0c6609077cc8328958 96 SMART SM00363 1 65 1.3E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_02301 e633f5ade6eafce5ba3955ae9b649a09 233 SUPERFAMILY SSF48150 12 225 2.67E-40 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AMC99_02301 e633f5ade6eafce5ba3955ae9b649a09 233 SMART SM00478 43 201 4.4E-11 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_02301 e633f5ade6eafce5ba3955ae9b649a09 233 Gene3D G3DSA:1.10.340.30 27 147 4.2E-55 T 11-10-2018 AMC99_02301 e633f5ade6eafce5ba3955ae9b649a09 233 PIRSF PIRSF001435 8 232 2.0E-38 T 11-10-2018 AMC99_02301 e633f5ade6eafce5ba3955ae9b649a09 233 Gene3D G3DSA:1.10.1670.10 8 223 4.2E-55 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AMC99_02301 e633f5ade6eafce5ba3955ae9b649a09 233 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 41 175 3.7E-6 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AMC99_00856 808854112ad215b0403d865b00610a5b 338 SUPERFAMILY SSF55729 3 336 1.33E-120 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_00856 808854112ad215b0403d865b00610a5b 338 Gene3D G3DSA:3.40.630.30 2 274 4.4E-105 T 11-10-2018 AMC99_00856 808854112ad215b0403d865b00610a5b 338 Pfam PF04958 Arginine N-succinyltransferase beta subunit 3 336 2.2E-127 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AMC99_00856 808854112ad215b0403d865b00610a5b 338 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 5 336 2.9E-108 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 AMC99_01250 30aa5a625f417d356ffb88dea7c6baad 207 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 167 6.4E-38 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01250 30aa5a625f417d356ffb88dea7c6baad 207 Gene3D G3DSA:1.20.120.1200 3 169 9.6E-43 T 11-10-2018 AMC99_01962 e73b0e25194fac2f7726bcd376793f84 68 Pfam PF01165 Ribosomal protein S21 2 55 1.7E-19 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01962 e73b0e25194fac2f7726bcd376793f84 68 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 36 2.0E-6 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01962 e73b0e25194fac2f7726bcd376793f84 68 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 8.6E-21 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01962 e73b0e25194fac2f7726bcd376793f84 68 Gene3D G3DSA:1.20.5.1150 14 52 2.7E-9 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01962 e73b0e25194fac2f7726bcd376793f84 68 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 14.221 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01962 e73b0e25194fac2f7726bcd376793f84 68 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 9.1E-5 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01962 e73b0e25194fac2f7726bcd376793f84 68 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 9.1E-5 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01962 e73b0e25194fac2f7726bcd376793f84 68 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 9.1E-5 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01962 e73b0e25194fac2f7726bcd376793f84 68 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01743 7215b56ee940a3b01ccb5c4a1664b00c 231 SUPERFAMILY SSF53681 120 228 2.94E-25 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_01743 7215b56ee940a3b01ccb5c4a1664b00c 231 Gene3D G3DSA:3.40.50.1860 4 223 5.2E-66 T 11-10-2018 AMC99_01743 7215b56ee940a3b01ccb5c4a1664b00c 231 Gene3D G3DSA:3.40.50.1860 104 214 5.2E-66 T 11-10-2018 AMC99_01743 7215b56ee940a3b01ccb5c4a1664b00c 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 3 230 1.4E-49 T 11-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AMC99_01743 7215b56ee940a3b01ccb5c4a1664b00c 231 SUPERFAMILY SSF53681 2 116 5.01E-28 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_01743 7215b56ee940a3b01ccb5c4a1664b00c 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 1.1E-47 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_02342 0d7701717977729d602d27192e81919b 524 SMART SM00382 22 330 0.004 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02342 0d7701717977729d602d27192e81919b 524 Gene3D G3DSA:3.40.50.300 1 88 3.7E-12 T 11-10-2018 AMC99_02342 0d7701717977729d602d27192e81919b 524 SUPERFAMILY SSF52540 4 387 3.35E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02342 0d7701717977729d602d27192e81919b 524 Gene3D G3DSA:3.40.50.300 202 386 5.8E-21 T 11-10-2018 AMC99_02342 0d7701717977729d602d27192e81919b 524 Pfam PF05872 Bacterial protein of unknown function (DUF853) 10 522 5.6E-219 T 11-10-2018 IPR033186 Helicase HerA-like C-terminal AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 SUPERFAMILY SSF53597 149 317 1.7E-40 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 Gene3D G3DSA:3.40.430.10 132 241 6.9E-32 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 104 1.3E-15 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 Gene3D G3DSA:3.40.430.10 242 325 2.2E-12 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 PIRSF PIRSF006769 237 324 2.2E-9 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 PIRSF PIRSF006769 3 246 1.3E-82 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 Gene3D G3DSA:3.40.140.10 3 131 5.8E-37 T 11-10-2018 AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 228 1.9E-71 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 Pfam PF01872 RibD C-terminal domain 151 296 4.2E-30 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMC99_02143 144b918d549bb4e1b49c3acbd61678ee 328 SUPERFAMILY SSF53927 7 129 1.62E-35 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_01218 1790b1591ec3df297cc87672359c002e 87 Pfam PF00462 Glutaredoxin 8 66 1.2E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMC99_01218 1790b1591ec3df297cc87672359c002e 87 PRINTS PR00160 Glutaredoxin signature 6 24 5.8E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AMC99_01218 1790b1591ec3df297cc87672359c002e 87 PRINTS PR00160 Glutaredoxin signature 63 76 5.8E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AMC99_01218 1790b1591ec3df297cc87672359c002e 87 PRINTS PR00160 Glutaredoxin signature 49 62 5.8E-11 T 11-10-2018 IPR014025 Glutaredoxin subgroup AMC99_01218 1790b1591ec3df297cc87672359c002e 87 Gene3D G3DSA:3.40.30.10 2 86 6.5E-26 T 11-10-2018 AMC99_01218 1790b1591ec3df297cc87672359c002e 87 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 6 85 2.2E-30 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AMC99_01218 1790b1591ec3df297cc87672359c002e 87 SUPERFAMILY SSF52833 3 86 2.48E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01684 02fbda3ea276921184d9d7bdf462ad30 188 Pfam PF02576 RimP N-terminal domain 11 92 2.7E-16 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal AMC99_01684 02fbda3ea276921184d9d7bdf462ad30 188 SUPERFAMILY SSF74942 93 162 2.35E-16 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AMC99_01684 02fbda3ea276921184d9d7bdf462ad30 188 Gene3D G3DSA:3.30.300.70 2 89 1.6E-10 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AMC99_01684 02fbda3ea276921184d9d7bdf462ad30 188 Pfam PF17384 RimP C-terminal SH3 domain 95 160 7.9E-15 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal AMC99_01684 02fbda3ea276921184d9d7bdf462ad30 188 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 161 22.073 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 AMC99_01684 02fbda3ea276921184d9d7bdf462ad30 188 SUPERFAMILY SSF75420 4 92 1.19E-15 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily AMC99_01083 5d9c197a0af5bf2a062fc5aaf3666b50 76 Pfam PF13773 Domain of unknown function (DUF4170) 7 74 5.2E-34 T 11-10-2018 IPR025226 Protein of unknown function DUF4170 AMC99_01083 5d9c197a0af5bf2a062fc5aaf3666b50 76 Gene3D G3DSA:3.30.70.2400 4 76 1.1E-29 T 11-10-2018 AMC99_01136 a998267a41bf38b2ffe413a7f8edc7a8 285 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 33 180 1.6E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AMC99_01136 a998267a41bf38b2ffe413a7f8edc7a8 285 SMART SM00382 29 187 3.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01136 a998267a41bf38b2ffe413a7f8edc7a8 285 SUPERFAMILY SSF52540 12 240 3.17E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01136 a998267a41bf38b2ffe413a7f8edc7a8 285 Gene3D G3DSA:3.40.50.300 14 194 1.4E-27 T 11-10-2018 AMC99_01519 7233e17cd9c36405a44b74ba172da68c 141 Gene3D G3DSA:3.90.1030.10 1 117 2.7E-47 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01519 7233e17cd9c36405a44b74ba172da68c 141 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.1E-42 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01519 7233e17cd9c36405a44b74ba172da68c 141 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01519 7233e17cd9c36405a44b74ba172da68c 141 Pfam PF01196 Ribosomal protein L17 20 116 1.4E-35 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01519 7233e17cd9c36405a44b74ba172da68c 141 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.219 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01519 7233e17cd9c36405a44b74ba172da68c 141 SUPERFAMILY SSF64263 1 119 1.44E-49 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00761 dda26e17589cec14cf870c1cdb01a5fd 337 Gene3D G3DSA:2.40.50.100 71 197 1.3E-35 T 11-10-2018 AMC99_00761 dda26e17589cec14cf870c1cdb01a5fd 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 242 4.2E-12 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMC99_00761 dda26e17589cec14cf870c1cdb01a5fd 337 Gene3D G3DSA:1.10.287.470 105 165 1.3E-35 T 11-10-2018 AMC99_00761 dda26e17589cec14cf870c1cdb01a5fd 337 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 332 1.0E-30 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMC99_00761 dda26e17589cec14cf870c1cdb01a5fd 337 SUPERFAMILY SSF111369 62 216 8.37E-17 T 11-10-2018 AMC99_00761 dda26e17589cec14cf870c1cdb01a5fd 337 Gene3D G3DSA:2.40.30.170 59 271 1.3E-35 T 11-10-2018 AMC99_00761 dda26e17589cec14cf870c1cdb01a5fd 337 Gene3D G3DSA:2.40.420.20 54 331 1.3E-35 T 11-10-2018 AMC99_01648 5e166717d392c6f6e60d120ad0705fa4 611 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 388 604 5.0E-106 T 11-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 AMC99_01648 5e166717d392c6f6e60d120ad0705fa4 611 SUPERFAMILY SSF53300 401 595 3.2E-14 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMC99_01648 5e166717d392c6f6e60d120ad0705fa4 611 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 8 606 3.7E-250 T 11-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 AMC99_01648 5e166717d392c6f6e60d120ad0705fa4 611 SMART SM00327 398 600 0.0056 T 11-10-2018 IPR002035 von Willebrand factor, type A AMC99_01648 5e166717d392c6f6e60d120ad0705fa4 611 PIRSF PIRSF031715 1 611 2.1E-247 T 11-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 AMC99_01648 5e166717d392c6f6e60d120ad0705fa4 611 Pfam PF06213 Cobalamin biosynthesis protein CobT 5 275 2.4E-87 T 11-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 AMC99_01648 5e166717d392c6f6e60d120ad0705fa4 611 Gene3D G3DSA:3.40.50.410 398 600 1.2E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMC99_00406 3ae6f62bb3c74e4811a0849939d1b8e2 102 Pfam PF03831 PhnA domain 35 101 2.2E-29 T 11-10-2018 IPR013988 PhnA protein, C-terminal AMC99_00406 3ae6f62bb3c74e4811a0849939d1b8e2 102 SUPERFAMILY SSF82057 32 101 4.39E-25 T 11-10-2018 AMC99_00406 3ae6f62bb3c74e4811a0849939d1b8e2 102 Gene3D G3DSA:2.30.30.40 31 102 3.1E-31 T 11-10-2018 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 23 327 8.3E-90 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 284 289 1.3E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 152 169 1.3E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 59 81 1.3E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 309 323 1.3E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 243 252 1.3E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 97 106 1.3E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 69 88 2.4E-11 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 289 2.4E-11 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 153 164 2.4E-11 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 SUPERFAMILY SSF53671 20 328 2.23E-88 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 Gene3D G3DSA:3.40.50.1370 28 322 2.5E-86 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 Gene3D G3DSA:3.40.50.1370 153 307 2.5E-86 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 69 76 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 23 165 8.7E-38 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 180 325 1.5E-20 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMC99_02017 2e9c1dff45b36c5933a35455768ecfe2 338 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 22 330 37.984 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_00148 a29038d219f3a441c281b94761dcd88a 411 PIRSF PIRSF006060 1 405 1.8E-51 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_00148 a29038d219f3a441c281b94761dcd88a 411 Gene3D G3DSA:1.20.1740.10 4 410 1.2E-72 T 11-10-2018 AMC99_00148 a29038d219f3a441c281b94761dcd88a 411 Pfam PF00324 Amino acid permease 14 394 1.3E-31 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 AMC99_01860 15d7768bde3d9465a2d00a935973f483 300 Pfam PF08478 POTRA domain, FtsQ-type 91 159 6.7E-14 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type AMC99_01860 15d7768bde3d9465a2d00a935973f483 300 Pfam PF03799 Cell division protein FtsQ 164 278 2.2E-11 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB AMC99_01860 15d7768bde3d9465a2d00a935973f483 300 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 60 296 20.622 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 AMC99_01860 15d7768bde3d9465a2d00a935973f483 300 Gene3D G3DSA:3.10.20.310 91 158 1.0E-8 T 11-10-2018 AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 346 502 7.1E-31 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 7 840 16.6 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 Gene3D G3DSA:2.40.30.10 516 630 8.2E-43 T 11-10-2018 AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 262 842 1.0E-232 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 Gene3D G3DSA:3.40.50.300 340 515 2.2E-68 T 11-10-2018 AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 Gene3D G3DSA:3.40.50.10050 637 743 2.3E-37 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 268 317 1.5E-15 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 Pfam PF11987 Translation-initiation factor 2 630 731 8.7E-37 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 SUPERFAMILY SSF52540 338 517 1.0E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 Gene3D G3DSA:2.40.30.10 744 841 2.4E-25 T 11-10-2018 AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 10 48 3.2E-10 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 SUPERFAMILY SSF50447 745 840 6.65E-25 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 Pfam PF00009 Elongation factor Tu GTP binding domain 348 504 2.3E-29 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 SUPERFAMILY SSF52156 626 749 5.1E-35 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMC99_01681 6e0deb1fba5642f17dcfad3308a8e82b 842 SUPERFAMILY SSF50447 516 600 1.68E-26 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_00561 41bbefefc9fedf2e2b3899a5f21c1316 133 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 130 22.754 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMC99_00561 41bbefefc9fedf2e2b3899a5f21c1316 133 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 129 1.3E-17 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMC99_00561 41bbefefc9fedf2e2b3899a5f21c1316 133 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 100 2.0E-45 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMC99_00561 41bbefefc9fedf2e2b3899a5f21c1316 133 Gene3D G3DSA:3.90.470.20 1 131 2.5E-30 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMC99_00561 41bbefefc9fedf2e2b3899a5f21c1316 133 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 130 3.5E-24 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AMC99_00561 41bbefefc9fedf2e2b3899a5f21c1316 133 SUPERFAMILY SSF56214 1 129 1.57E-24 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMC99_00561 41bbefefc9fedf2e2b3899a5f21c1316 133 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 106 4.8E-14 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AMC99_01492 711879c5f5de654701f40945a2d86aa9 98 Gene3D G3DSA:3.30.1390.10 60 98 5.9E-9 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_01492 711879c5f5de654701f40945a2d86aa9 98 SUPERFAMILY SSF54736 68 95 1.12E-5 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMC99_01492 711879c5f5de654701f40945a2d86aa9 98 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 68 95 3.5E-8 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01492 711879c5f5de654701f40945a2d86aa9 98 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 68 95 0.003 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02471 71caf5a3b12d6c0d4dc468d0cc7e9b9d 202 Pfam PF01966 HD domain 64 151 7.3E-8 T 11-10-2018 IPR006674 HD domain AMC99_02471 71caf5a3b12d6c0d4dc468d0cc7e9b9d 202 SUPERFAMILY SSF109604 14 141 1.16E-29 T 11-10-2018 AMC99_02471 71caf5a3b12d6c0d4dc468d0cc7e9b9d 202 Gene3D G3DSA:1.10.3210.10 44 197 3.8E-18 T 11-10-2018 AMC99_01923 ab1bb8cec5a00cc9d71a7a527cd5e29d 163 Pfam PF01478 Type IV leader peptidase family 14 116 4.9E-12 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMC99_01923 ab1bb8cec5a00cc9d71a7a527cd5e29d 163 Gene3D G3DSA:1.20.120.1220 5 125 9.0E-10 T 11-10-2018 AMC99_01997 96e4602a84bce1584a4164ede84be31c 163 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 119 2.2E-19 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AMC99_01997 96e4602a84bce1584a4164ede84be31c 163 SUPERFAMILY SSF51316 5 148 1.57E-38 T 11-10-2018 IPR011057 Mss4-like superfamily AMC99_01997 96e4602a84bce1584a4164ede84be31c 163 Gene3D G3DSA:3.90.1590.10 2 123 7.4E-13 T 11-10-2018 AMC99_02353 4861b294ff3adda3ad83d386c201a9a3 65 SUPERFAMILY SSF47598 6 52 8.34E-10 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMC99_02353 4861b294ff3adda3ad83d386c201a9a3 65 Gene3D G3DSA:1.10.1220.10 2 49 2.0E-6 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 AMC99_01792 8f6fef25bb7c60e42f82989153775d21 370 SUPERFAMILY SSF50129 19 180 5.45E-22 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_01792 8f6fef25bb7c60e42f82989153775d21 370 Gene3D G3DSA:3.40.50.720 148 335 2.7E-142 T 11-10-2018 AMC99_01792 8f6fef25bb7c60e42f82989153775d21 370 Pfam PF00107 Zinc-binding dehydrogenase 179 256 3.4E-8 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_01792 8f6fef25bb7c60e42f82989153775d21 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 127 1.4E-4 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_01792 8f6fef25bb7c60e42f82989153775d21 370 SUPERFAMILY SSF51735 140 258 1.06E-17 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01792 8f6fef25bb7c60e42f82989153775d21 370 Gene3D G3DSA:3.90.180.10 7 368 2.7E-142 T 11-10-2018 AMC99_01792 8f6fef25bb7c60e42f82989153775d21 370 SMART SM00829 16 366 4.7E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_02415 e6c042e2e1cbf8097403fca4f7fd343e 243 Gene3D G3DSA:3.40.50.1820 2 243 2.4E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02415 e6c042e2e1cbf8097403fca4f7fd343e 243 SUPERFAMILY SSF53474 2 238 2.14E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02415 e6c042e2e1cbf8097403fca4f7fd343e 243 Pfam PF12697 Alpha/beta hydrolase family 27 211 1.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01142 272bc31b30b6458aac5a279788df39a2 388 Pfam PF13458 Periplasmic binding protein 57 374 1.7E-29 T 11-10-2018 IPR028081 Leucine-binding protein domain AMC99_01142 272bc31b30b6458aac5a279788df39a2 388 Gene3D G3DSA:3.40.50.2300 163 374 4.3E-31 T 11-10-2018 AMC99_01142 272bc31b30b6458aac5a279788df39a2 388 SUPERFAMILY SSF53822 57 379 1.7E-60 T 11-10-2018 IPR028082 Periplasmic binding protein-like I AMC99_01142 272bc31b30b6458aac5a279788df39a2 388 Gene3D G3DSA:3.40.50.2300 58 364 4.3E-31 T 11-10-2018 AMC99_02656 35e281e2e7b72359ad5520017dd8f469 166 Pfam PF03703 Bacterial PH domain 82 157 2.9E-17 T 11-10-2018 IPR005182 Domain of unknown function DUF304 AMC99_01980 e68c928df863e81ba0cc573e09f5e7aa 405 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 19 389 4.6E-130 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMC99_01980 e68c928df863e81ba0cc573e09f5e7aa 405 Pfam PF06965 Na+/H+ antiporter 1 19 389 1.1E-135 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMC99_01980 e68c928df863e81ba0cc573e09f5e7aa 405 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 15 395 21.868 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 AMC99_01980 e68c928df863e81ba0cc573e09f5e7aa 405 Gene3D G3DSA:1.20.1530.10 13 396 2.4E-138 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily AMC99_02742 637e830a9c3525fc712726b671c9ded8 378 Gene3D G3DSA:3.40.630.30 179 326 1.7E-5 T 11-10-2018 AMC99_02742 637e830a9c3525fc712726b671c9ded8 378 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 14 377 8.7E-152 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition AMC99_02742 637e830a9c3525fc712726b671c9ded8 378 SUPERFAMILY SSF55729 180 351 2.91E-40 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 SUPERFAMILY SSF52096 32 216 2.13E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 112 129 3.2E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 81 101 3.2E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 190 209 3.2E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 41 56 3.2E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 PRINTS PR00127 Clp protease catalytic subunit P signature 133 152 3.2E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 112 123 - T 11-10-2018 IPR018215 ClpP, Ser active site AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 Pfam PF00574 Clp protease 35 214 3.9E-84 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 25 215 41.574 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 Gene3D G3DSA:3.90.226.10 17 218 3.0E-79 T 11-10-2018 AMC99_02002 e437cf233b31ad6953f0fe43e1989af6 232 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 134 147 - T 11-10-2018 IPR033135 ClpP, histidine active site AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 553 6.0E-26 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 Pfam PF00682 HMGL-like 32 311 6.1E-74 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 SUPERFAMILY SSF51569 20 328 1.12E-94 T 11-10-2018 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 555 52.656 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 SUPERFAMILY SSF110921 443 553 8.76E-34 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 SUPERFAMILY SSF89000 389 437 5.1E-15 T 11-10-2018 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 Gene3D G3DSA:3.30.160.270 377 553 1.8E-61 T 11-10-2018 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 Gene3D G3DSA:3.20.20.70 10 376 5.3E-151 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 554 1.8E-247 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 SMART SM00917 422 554 1.0E-33 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMC99_01040 9565b128fc1ebeef57024eb2d75b90c5 557 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 AMC99_01204 e2de998ca3ba64e2db18857e004c1f0e 154 ProSitePatterns PS00018 EF-hand calcium-binding domain. 101 113 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMC99_01204 e2de998ca3ba64e2db18857e004c1f0e 154 ProSitePatterns PS00018 EF-hand calcium-binding domain. 125 137 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site AMC99_01204 e2de998ca3ba64e2db18857e004c1f0e 154 Gene3D G3DSA:1.10.238.10 65 142 7.6E-9 T 11-10-2018 AMC99_01204 e2de998ca3ba64e2db18857e004c1f0e 154 Pfam PF13202 EF hand 121 139 0.053 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AMC99_01204 e2de998ca3ba64e2db18857e004c1f0e 154 Pfam PF13202 EF hand 95 113 0.0083 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 AMC99_01204 e2de998ca3ba64e2db18857e004c1f0e 154 SUPERFAMILY SSF47473 65 139 2.58E-11 T 11-10-2018 IPR011992 EF-hand domain pair AMC99_01981 f540582ed4a113e287bae67873987809 145 Gene3D G3DSA:3.10.180.10 2 132 3.1E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_01981 f540582ed4a113e287bae67873987809 145 SUPERFAMILY SSF54593 3 129 3.85E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_01981 f540582ed4a113e287bae67873987809 145 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 124 8.2E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_00111 d7c38497b7e49ce9d49f9f851935b9d7 239 Gene3D G3DSA:3.40.50.2300 3 131 1.0E-31 T 11-10-2018 AMC99_00111 d7c38497b7e49ce9d49f9f851935b9d7 239 SMART SM00862 160 235 6.6E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00111 d7c38497b7e49ce9d49f9f851935b9d7 239 Pfam PF00072 Response regulator receiver domain 17 127 2.0E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00111 d7c38497b7e49ce9d49f9f851935b9d7 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 235 9.1E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_00111 d7c38497b7e49ce9d49f9f851935b9d7 239 SUPERFAMILY SSF46894 138 236 1.39E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_00111 d7c38497b7e49ce9d49f9f851935b9d7 239 SMART SM00448 15 126 4.0E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00111 d7c38497b7e49ce9d49f9f851935b9d7 239 Gene3D G3DSA:1.10.10.10 132 238 2.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00111 d7c38497b7e49ce9d49f9f851935b9d7 239 SUPERFAMILY SSF52172 13 138 7.12E-33 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01453 f5c18259ece20121b0348802657baffd 466 SMART SM00490 256 337 1.7E-33 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_01453 f5c18259ece20121b0348802657baffd 466 Pfam PF00271 Helicase conserved C-terminal domain 233 337 7.3E-30 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_01453 f5c18259ece20121b0348802657baffd 466 Pfam PF00270 DEAD/DEAH box helicase 25 194 4.8E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_01453 f5c18259ece20121b0348802657baffd 466 SUPERFAMILY SSF52540 74 355 4.03E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01453 f5c18259ece20121b0348802657baffd 466 SMART SM00487 20 220 1.5E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_01453 f5c18259ece20121b0348802657baffd 466 Gene3D G3DSA:3.40.50.300 1 209 2.0E-75 T 11-10-2018 AMC99_01453 f5c18259ece20121b0348802657baffd 466 Gene3D G3DSA:3.40.50.300 210 401 6.1E-50 T 11-10-2018 AMC99_01453 f5c18259ece20121b0348802657baffd 466 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMC99_00120 8800ee3248c9f13a287c7cc72d6c030b 148 Gene3D G3DSA:1.10.490.10 13 132 2.3E-34 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 AMC99_00120 8800ee3248c9f13a287c7cc72d6c030b 148 SUPERFAMILY SSF46458 18 127 8.63E-25 T 11-10-2018 IPR009050 Globin-like superfamily AMC99_00371 078f346237bca3286dba7cd5629d219c 437 Pfam PF07690 Major Facilitator Superfamily 46 388 2.0E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_00371 078f346237bca3286dba7cd5629d219c 437 SUPERFAMILY SSF103473 38 420 2.22E-56 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00371 078f346237bca3286dba7cd5629d219c 437 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 41 419 2.4E-60 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 AMC99_00371 078f346237bca3286dba7cd5629d219c 437 Gene3D G3DSA:1.20.1720.10 41 420 2.4E-83 T 11-10-2018 AMC99_00528 33c00b874321e9d0a17ee79c5d9f3f13 608 Gene3D G3DSA:3.40.50.300 3 208 1.5E-64 T 11-10-2018 AMC99_00528 33c00b874321e9d0a17ee79c5d9f3f13 608 Pfam PF03880 DbpA RNA binding domain 458 517 9.9E-13 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AMC99_00528 33c00b874321e9d0a17ee79c5d9f3f13 608 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMC99_00528 33c00b874321e9d0a17ee79c5d9f3f13 608 SUPERFAMILY SSF52540 74 353 2.89E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00528 33c00b874321e9d0a17ee79c5d9f3f13 608 Pfam PF00270 DEAD/DEAH box helicase 23 192 1.2E-42 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_00528 33c00b874321e9d0a17ee79c5d9f3f13 608 SMART SM00490 257 338 3.6E-25 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00528 33c00b874321e9d0a17ee79c5d9f3f13 608 SMART SM00487 18 221 1.4E-50 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_00528 33c00b874321e9d0a17ee79c5d9f3f13 608 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.2E-23 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00528 33c00b874321e9d0a17ee79c5d9f3f13 608 Gene3D G3DSA:3.40.50.300 225 426 1.1E-38 T 11-10-2018 AMC99_00219 c826a16af167781b8513c08a90ab8318 144 SUPERFAMILY SSF54211 12 116 7.84E-25 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_00219 c826a16af167781b8513c08a90ab8318 144 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 9 118 14.926 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMC99_00219 c826a16af167781b8513c08a90ab8318 144 Gene3D G3DSA:3.30.230.10 10 120 1.4E-24 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_00219 c826a16af167781b8513c08a90ab8318 144 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 35 108 5.0E-9 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMC99_00219 c826a16af167781b8513c08a90ab8318 144 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 15 115 2.0E-16 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMC99_00219 c826a16af167781b8513c08a90ab8318 144 Pfam PF00825 Ribonuclease P 15 115 1.5E-21 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMC99_02344 ec200712a15397ca1c4415f1b1bf5cd7 216 Gene3D G3DSA:3.30.2350.10 3 212 9.4E-56 T 11-10-2018 AMC99_02344 ec200712a15397ca1c4415f1b1bf5cd7 216 Pfam PF00849 RNA pseudouridylate synthase 12 158 1.6E-31 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_02344 ec200712a15397ca1c4415f1b1bf5cd7 216 SUPERFAMILY SSF55120 2 210 6.88E-52 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_02344 ec200712a15397ca1c4415f1b1bf5cd7 216 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_00216 fb478ad44b8415a6e207c6a6971a009a 502 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 140 2.5E-38 T 11-10-2018 AMC99_00216 fb478ad44b8415a6e207c6a6971a009a 502 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 496 1.9E-29 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AMC99_00216 fb478ad44b8415a6e207c6a6971a009a 502 SUPERFAMILY SSF54211 3 166 4.93E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_00216 fb478ad44b8415a6e207c6a6971a009a 502 SMART SM00382 208 390 3.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00216 fb478ad44b8415a6e207c6a6971a009a 502 Pfam PF01078 Magnesium chelatase, subunit ChlI 188 391 1.3E-92 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain AMC99_00216 fb478ad44b8415a6e207c6a6971a009a 502 SUPERFAMILY SSF52540 185 498 8.79E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00216 fb478ad44b8415a6e207c6a6971a009a 502 Gene3D G3DSA:3.40.50.300 189 501 1.4E-54 T 11-10-2018 AMC99_00216 fb478ad44b8415a6e207c6a6971a009a 502 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 496 3.4E-160 T 11-10-2018 IPR004482 Mg chelatase-related protein AMC99_02784 46e0cbcc33f3047f5abf7a0735bfaa29 235 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 215 4.6E-68 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 AMC99_02784 46e0cbcc33f3047f5abf7a0735bfaa29 235 SUPERFAMILY SSF100950 3 230 2.51E-82 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMC99_02784 46e0cbcc33f3047f5abf7a0735bfaa29 235 Gene3D G3DSA:3.40.1080.10 1 227 8.6E-91 T 11-10-2018 AMC99_02784 46e0cbcc33f3047f5abf7a0735bfaa29 235 Pfam PF01144 Coenzyme A transferase 8 216 1.2E-74 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMC99_02784 46e0cbcc33f3047f5abf7a0735bfaa29 235 SMART SM00882 5 217 1.0E-84 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 AMC99_02763 71425985b4b67a9c8121057fce8a4107 380 Gene3D G3DSA:3.90.1150.10 17 368 1.2E-74 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_02763 71425985b4b67a9c8121057fce8a4107 380 Gene3D G3DSA:3.40.640.10 29 289 1.2E-74 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_02763 71425985b4b67a9c8121057fce8a4107 380 Pfam PF00266 Aminotransferase class-V 50 349 1.0E-29 T 11-10-2018 IPR000192 Aminotransferase class V domain AMC99_02763 71425985b4b67a9c8121057fce8a4107 380 SUPERFAMILY SSF53383 2 379 3.1E-65 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 148 170 15.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 95 117 140.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 223 261 2900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 262 284 1200.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 193 214 1300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 171 192 150.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 SMART SM00710 118 147 7700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 SUPERFAMILY SSF51126 20 300 7.39E-43 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 Pfam PF13229 Right handed beta helix region 92 282 1.8E-17 T 11-10-2018 IPR039448 Right handed beta helix domain AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 Gene3D G3DSA:2.160.20.10 25 322 4.6E-30 T 11-10-2018 IPR012334 Pectin lyase fold AMC99_01745 19d379fbd8bfc3c789e25e7c62ed0819 400 TIGRFAM TIGR03805 beta_helix_1: parallel beta-helix repeat-containing protein 34 339 1.0E-123 T 11-10-2018 IPR022442 Parallel beta-helix repeat-containing domain AMC99_00805 41e7252b419549df7bf6b1346b94156b 336 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 333 3.6E-40 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 AMC99_00805 41e7252b419549df7bf6b1346b94156b 336 Gene3D G3DSA:3.90.850.10 1 336 1.4E-138 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMC99_00805 41e7252b419549df7bf6b1346b94156b 336 SUPERFAMILY SSF56529 76 335 1.13E-60 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 AMC99_00570 71d38d722c2e7b924f2a975574850924 277 Gene3D G3DSA:1.20.120.80 76 270 2.4E-79 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00570 71d38d722c2e7b924f2a975574850924 277 Pfam PF00510 Cytochrome c oxidase subunit III 7 269 1.8E-90 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00570 71d38d722c2e7b924f2a975574850924 277 Gene3D G3DSA:1.10.287.70 2 75 4.0E-21 T 11-10-2018 AMC99_00570 71d38d722c2e7b924f2a975574850924 277 SUPERFAMILY SSF81452 5 269 8.11E-90 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_02321 e7d57f79ac7a96de4b8a3c91ba84948f 237 Gene3D G3DSA:3.40.50.300 1 234 8.6E-72 T 11-10-2018 AMC99_02321 e7d57f79ac7a96de4b8a3c91ba84948f 237 ProSitePatterns PS00211 ABC transporters family signature. 117 131 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_02321 e7d57f79ac7a96de4b8a3c91ba84948f 237 Pfam PF00005 ABC transporter 3 144 9.9E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_02321 e7d57f79ac7a96de4b8a3c91ba84948f 237 SUPERFAMILY SSF52540 2 217 2.79E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02321 e7d57f79ac7a96de4b8a3c91ba84948f 237 SMART SM00382 10 194 1.3E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01741 90041003ca60ac506bfe2dc699d46aec 230 Pfam PF13460 NAD(P)H-binding 11 169 1.1E-13 T 11-10-2018 IPR016040 NAD(P)-binding domain AMC99_01741 90041003ca60ac506bfe2dc699d46aec 230 Gene3D G3DSA:3.40.50.720 1 227 2.8E-51 T 11-10-2018 AMC99_01741 90041003ca60ac506bfe2dc699d46aec 230 SUPERFAMILY SSF51735 5 215 1.19E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00050 b59c7f1897b21646c4f6f235d55a20ad 712 Gene3D G3DSA:3.40.50.300 138 523 1.8E-122 T 11-10-2018 AMC99_00050 b59c7f1897b21646c4f6f235d55a20ad 712 SUPERFAMILY SSF52540 142 528 4.81E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00050 b59c7f1897b21646c4f6f235d55a20ad 712 Gene3D G3DSA:1.10.8.80 216 326 1.8E-122 T 11-10-2018 AMC99_00050 b59c7f1897b21646c4f6f235d55a20ad 712 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 140 524 1.9E-145 T 11-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain AMC99_00419 d87cd26df714c9278cad1042eb4bd021 718 Pfam PF00082 Subtilase family 38 293 2.3E-34 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMC99_00419 d87cd26df714c9278cad1042eb4bd021 718 Gene3D G3DSA:3.40.50.200 2 304 2.3E-69 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMC99_00419 d87cd26df714c9278cad1042eb4bd021 718 SUPERFAMILY SSF52743 22 302 3.4E-63 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 AMC99_00419 d87cd26df714c9278cad1042eb4bd021 718 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 43 54 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site AMC99_00419 d87cd26df714c9278cad1042eb4bd021 718 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 243 253 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site AMC99_00419 d87cd26df714c9278cad1042eb4bd021 718 PRINTS PR00723 Subtilisin serine protease family (S8) signature 76 89 3.9E-12 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AMC99_00419 d87cd26df714c9278cad1042eb4bd021 718 PRINTS PR00723 Subtilisin serine protease family (S8) signature 242 258 3.9E-12 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AMC99_00419 d87cd26df714c9278cad1042eb4bd021 718 PRINTS PR00723 Subtilisin serine protease family (S8) signature 38 57 3.9E-12 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related AMC99_00394 2bc9a632ad5f8471445634b202e2e2c2 632 Pfam PF13667 ThiC-associated domain 17 86 3.8E-22 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMC99_00394 2bc9a632ad5f8471445634b202e2e2c2 632 Gene3D G3DSA:3.20.20.540 199 512 6.9E-151 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMC99_00394 2bc9a632ad5f8471445634b202e2e2c2 632 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 128 580 2.0E-213 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMC99_00394 2bc9a632ad5f8471445634b202e2e2c2 632 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 128 581 99.115 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMC99_00394 2bc9a632ad5f8471445634b202e2e2c2 632 Pfam PF01964 Radical SAM ThiC family 129 577 9.7E-199 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AMC99_01898 bf717674f62c07e71174b6b3a5eb630a 206 SUPERFAMILY SSF53955 54 204 4.55E-40 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMC99_01898 bf717674f62c07e71174b6b3a5eb630a 206 Gene3D G3DSA:1.10.530.40 56 206 2.5E-41 T 11-10-2018 AMC99_01898 bf717674f62c07e71174b6b3a5eb630a 206 Pfam PF00959 Phage lysozyme 93 197 7.1E-18 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 AMC99_02039 fc24e33be9e88e5b85f1f2fb2cb3d5da 244 Pfam PF03734 L,D-transpeptidase catalytic domain 124 231 3.0E-16 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMC99_02039 fc24e33be9e88e5b85f1f2fb2cb3d5da 244 Gene3D G3DSA:2.40.440.10 123 239 1.0E-26 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_02039 fc24e33be9e88e5b85f1f2fb2cb3d5da 244 SUPERFAMILY SSF141523 121 231 2.35E-27 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_01623 addf41cc933bcc7f9b4347ebe248b364 290 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 40 121 1.4E-7 T 11-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AMC99_01623 addf41cc933bcc7f9b4347ebe248b364 290 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 123 154 5.0E-11 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 AMC99_01623 addf41cc933bcc7f9b4347ebe248b364 290 Gene3D G3DSA:3.90.79.20 34 155 2.1E-13 T 11-10-2018 AMC99_01623 addf41cc933bcc7f9b4347ebe248b364 290 ProSitePatterns PS00893 Nudix box signature. 189 210 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMC99_01623 addf41cc933bcc7f9b4347ebe248b364 290 Gene3D G3DSA:3.90.79.10 157 290 2.3E-34 T 11-10-2018 AMC99_01623 addf41cc933bcc7f9b4347ebe248b364 290 Pfam PF00293 NUDIX domain 160 264 6.1E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_01623 addf41cc933bcc7f9b4347ebe248b364 290 SUPERFAMILY SSF55811 108 288 1.76E-41 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 2 330 60.643 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 Gene3D G3DSA:3.30.420.40 4 312 6.1E-117 T 11-10-2018 AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 SUPERFAMILY SSF53067 4 124 7.51E-31 T 11-10-2018 AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 SUPERFAMILY SSF53067 102 308 1.02E-40 T 11-10-2018 AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 4 312 2.3E-124 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 Pfam PF00814 Glycoprotease family 25 306 7.9E-95 T 11-10-2018 IPR000905 Gcp-like domain AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 155 176 1.6E-44 T 11-10-2018 IPR017861 Kae1/TsaD family AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 262 271 1.6E-44 T 11-10-2018 IPR017861 Kae1/TsaD family AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 1.6E-44 T 11-10-2018 IPR017861 Kae1/TsaD family AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 132 144 1.6E-44 T 11-10-2018 IPR017861 Kae1/TsaD family AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 5 18 1.6E-44 T 11-10-2018 IPR017861 Kae1/TsaD family AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 1.6E-44 T 11-10-2018 IPR017861 Kae1/TsaD family AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 305 5.9E-99 T 11-10-2018 IPR017861 Kae1/TsaD family AMC99_00815 415570bbb20873b17c28c11244dbc57a 344 Gene3D G3DSA:3.30.420.40 130 292 6.1E-117 T 11-10-2018 AMC99_00780 f5010d8e3a1984c14f823c17b671ac3b 253 SUPERFAMILY SSF46548 38 127 9.59E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_00780 f5010d8e3a1984c14f823c17b671ac3b 253 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 95 106 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_00780 f5010d8e3a1984c14f823c17b671ac3b 253 Gene3D G3DSA:1.10.1060.10 4 128 1.2E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AMC99_00780 f5010d8e3a1984c14f823c17b671ac3b 253 Pfam PF13183 4Fe-4S dicluster domain 46 108 1.6E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMC99_00780 f5010d8e3a1984c14f823c17b671ac3b 253 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 49 60 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMC99_00952 da68201791e2079575c6a91814d0e888 1149 Gene3D G3DSA:3.40.50.300 733 897 8.5E-20 T 11-10-2018 AMC99_00952 da68201791e2079575c6a91814d0e888 1149 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 11 1133 1.9E-293 T 11-10-2018 IPR014151 DNA helicase, AddA type AMC99_00952 da68201791e2079575c6a91814d0e888 1149 Pfam PF12705 PD-(D/E)XK nuclease superfamily 979 1130 1.6E-11 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMC99_00952 da68201791e2079575c6a91814d0e888 1149 Pfam PF13361 UvrD-like helicase C-terminal domain 772 879 2.6E-11 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMC99_00952 da68201791e2079575c6a91814d0e888 1149 SUPERFAMILY SSF52980 968 1114 1.23E-5 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMC99_00952 da68201791e2079575c6a91814d0e888 1149 Gene3D G3DSA:3.40.50.300 563 670 7.2E-11 T 11-10-2018 AMC99_00952 da68201791e2079575c6a91814d0e888 1149 Gene3D G3DSA:3.40.50.300 233 469 2.2E-26 T 11-10-2018 AMC99_00952 da68201791e2079575c6a91814d0e888 1149 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 465 7.3E-44 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AMC99_00952 da68201791e2079575c6a91814d0e888 1149 SUPERFAMILY SSF52540 6 884 1.2E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01501 974d22f6bd557a6d459fcc06dc12c3b0 277 Pfam PF01497 Periplasmic binding protein 37 242 1.4E-18 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain AMC99_01501 974d22f6bd557a6d459fcc06dc12c3b0 277 Gene3D G3DSA:3.40.50.1980 29 154 5.2E-15 T 11-10-2018 AMC99_01501 974d22f6bd557a6d459fcc06dc12c3b0 277 SUPERFAMILY SSF53807 37 270 1.06E-28 T 11-10-2018 AMC99_01501 974d22f6bd557a6d459fcc06dc12c3b0 277 Gene3D G3DSA:3.40.50.1980 156 273 3.4E-7 T 11-10-2018 AMC99_00605 4587f42ed46652371b4d4987b08c252e 206 SUPERFAMILY SSF143081 2 189 1.14E-43 T 11-10-2018 IPR036590 SOS response associated peptidase-like AMC99_00605 4587f42ed46652371b4d4987b08c252e 206 Gene3D G3DSA:3.90.1680.10 1 195 4.4E-29 T 11-10-2018 IPR036590 SOS response associated peptidase-like AMC99_00605 4587f42ed46652371b4d4987b08c252e 206 Pfam PF02586 SOS response associated peptidase (SRAP) 1 185 2.1E-19 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) AMC99_01292 ea9c7a3263e1c5512b3581c75e30fcb7 407 Gene3D G3DSA:3.40.50.2000 220 380 1.0E-16 T 11-10-2018 AMC99_01292 ea9c7a3263e1c5512b3581c75e30fcb7 407 Gene3D G3DSA:3.40.50.2000 20 219 9.4E-6 T 11-10-2018 AMC99_01292 ea9c7a3263e1c5512b3581c75e30fcb7 407 Pfam PF13692 Glycosyl transferases group 1 227 359 2.0E-22 T 11-10-2018 AMC99_01292 ea9c7a3263e1c5512b3581c75e30fcb7 407 SUPERFAMILY SSF53756 12 397 2.35E-30 T 11-10-2018 AMC99_01292 ea9c7a3263e1c5512b3581c75e30fcb7 407 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 4 397 9.9E-113 T 11-10-2018 IPR017521 Sugar transferase, PEP-CTERM, Stp1 AMC99_02432 a613034080ad762575ec98071605ee7c 93 SMART SM00411 1 91 2.0E-35 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_02432 a613034080ad762575ec98071605ee7c 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_02432 a613034080ad762575ec98071605ee7c 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_02432 a613034080ad762575ec98071605ee7c 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_02432 a613034080ad762575ec98071605ee7c 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMC99_02432 a613034080ad762575ec98071605ee7c 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.0E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_02432 a613034080ad762575ec98071605ee7c 93 Gene3D G3DSA:4.10.520.10 1 93 5.4E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMC99_02432 a613034080ad762575ec98071605ee7c 93 SUPERFAMILY SSF47729 1 92 2.21E-28 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMC99_00620 011fd71a378d76b0032b9349d863648e 74 SMART SM00357 8 73 1.1E-18 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AMC99_00620 011fd71a378d76b0032b9349d863648e 74 Gene3D G3DSA:2.40.50.140 2 70 5.5E-23 T 11-10-2018 AMC99_00620 011fd71a378d76b0032b9349d863648e 74 PIRSF PIRSF002599 2 74 2.9E-20 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AMC99_00620 011fd71a378d76b0032b9349d863648e 74 PRINTS PR00050 Cold shock protein signature 9 24 1.8E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_00620 011fd71a378d76b0032b9349d863648e 74 PRINTS PR00050 Cold shock protein signature 45 63 1.8E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_00620 011fd71a378d76b0032b9349d863648e 74 PRINTS PR00050 Cold shock protein signature 30 39 1.8E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_00620 011fd71a378d76b0032b9349d863648e 74 SUPERFAMILY SSF50249 5 71 4.93E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_00620 011fd71a378d76b0032b9349d863648e 74 Pfam PF00313 'Cold-shock' DNA-binding domain 8 71 4.5E-21 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMC99_01553 dcadedd628fcb7c7379c725c0338ba92 194 SUPERFAMILY SSF55729 13 160 3.01E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01553 dcadedd628fcb7c7379c725c0338ba92 194 Gene3D G3DSA:3.40.630.30 6 182 5.7E-36 T 11-10-2018 AMC99_00951 018d7b16214a1fe4d685724d6440c6c2 1006 SUPERFAMILY SSF52980 734 889 9.65E-7 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMC99_00951 018d7b16214a1fe4d685724d6440c6c2 1006 Pfam PF12705 PD-(D/E)XK nuclease superfamily 729 962 1.1E-20 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMC99_00951 018d7b16214a1fe4d685724d6440c6c2 1006 SUPERFAMILY SSF52540 351 697 2.83E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02632 79c211ce19bb42593412034a5a1bd8d8 397 SUPERFAMILY SSF111369 103 315 8.11E-18 T 11-10-2018 AMC99_02632 79c211ce19bb42593412034a5a1bd8d8 397 Gene3D G3DSA:2.40.30.170 82 314 1.2E-60 T 11-10-2018 AMC99_02632 79c211ce19bb42593412034a5a1bd8d8 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 308 5.6E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMC99_02632 79c211ce19bb42593412034a5a1bd8d8 397 Gene3D G3DSA:2.40.420.20 71 373 1.2E-60 T 11-10-2018 AMC99_02632 79c211ce19bb42593412034a5a1bd8d8 397 Gene3D G3DSA:1.10.287.470 133 202 1.2E-60 T 11-10-2018 AMC99_02632 79c211ce19bb42593412034a5a1bd8d8 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 69 387 3.7E-56 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AMC99_02632 79c211ce19bb42593412034a5a1bd8d8 397 Gene3D G3DSA:2.40.50.100 94 236 1.2E-60 T 11-10-2018 AMC99_00024 3a2e125ffcac20e7458d5134fd0e3cd0 407 SUPERFAMILY SSF56349 99 382 1.53E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_00024 3a2e125ffcac20e7458d5134fd0e3cd0 407 Gene3D G3DSA:3.30.160.390 1 100 1.4E-33 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily AMC99_00024 3a2e125ffcac20e7458d5134fd0e3cd0 407 Pfam PF00589 Phage integrase family 209 371 3.0E-22 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_00024 3a2e125ffcac20e7458d5134fd0e3cd0 407 Gene3D G3DSA:1.10.150.130 101 206 1.3E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMC99_00024 3a2e125ffcac20e7458d5134fd0e3cd0 407 Pfam PF13356 Arm DNA-binding domain 3 87 9.0E-23 T 11-10-2018 IPR025166 Integrase, DNA-binding domain AMC99_00024 3a2e125ffcac20e7458d5134fd0e3cd0 407 Gene3D G3DSA:1.10.443.10 207 384 1.1E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMC99_02087 55cd6b35c9e351e34967059f8228cc0b 192 Gene3D G3DSA:3.30.70.1560 76 180 5.4E-57 T 11-10-2018 AMC99_02087 55cd6b35c9e351e34967059f8228cc0b 192 Gene3D G3DSA:3.30.70.580 16 187 5.4E-57 T 11-10-2018 AMC99_02087 55cd6b35c9e351e34967059f8228cc0b 192 SUPERFAMILY SSF55120 13 189 3.2E-38 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_02087 55cd6b35c9e351e34967059f8228cc0b 192 Pfam PF00849 RNA pseudouridylate synthase 14 161 5.9E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_02087 55cd6b35c9e351e34967059f8228cc0b 192 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 18 191 3.6E-53 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMC99_01167 3fc1efe9ab0ab981e3d061674e294c80 195 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 22 81 1.0E-29 T 11-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal AMC99_01167 3fc1efe9ab0ab981e3d061674e294c80 195 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 21 126 1.7E-45 T 11-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 AMC99_01167 3fc1efe9ab0ab981e3d061674e294c80 195 Pfam PF05233 PHB accumulation regulatory domain 86 125 1.8E-18 T 11-10-2018 IPR007897 PHB accumulation regulatory AMC99_02158 62b5b34aa95d63938dded381be7af2e6 257 SUPERFAMILY SSF53474 2 242 2.09E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02158 62b5b34aa95d63938dded381be7af2e6 257 Gene3D G3DSA:3.40.50.1820 1 240 1.2E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02158 62b5b34aa95d63938dded381be7af2e6 257 Pfam PF00561 alpha/beta hydrolase fold 2 226 4.8E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01151 06430de3d046979eff596c06ef830006 237 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.208 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AMC99_01151 06430de3d046979eff596c06ef830006 237 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 1.5E-7 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_01151 06430de3d046979eff596c06ef830006 237 SUPERFAMILY SSF54211 1 181 8.1E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_01151 06430de3d046979eff596c06ef830006 237 Gene3D G3DSA:3.30.230.70 9 237 1.5E-58 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_01151 06430de3d046979eff596c06ef830006 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 139 1.6E-23 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_01151 06430de3d046979eff596c06ef830006 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site AMC99_01151 06430de3d046979eff596c06ef830006 237 SUPERFAMILY SSF55666 153 236 5.63E-21 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AMC99_01151 06430de3d046979eff596c06ef830006 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.2E-109 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 AMC99_01134 3441b34e54d6afcfc61ff885f726ba82 471 SMART SM00283 31 290 4.6E-14 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_01134 3441b34e54d6afcfc61ff885f726ba82 471 Gene3D G3DSA:1.10.287.950 11 303 4.2E-35 T 11-10-2018 AMC99_01134 3441b34e54d6afcfc61ff885f726ba82 471 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 130 253 5.5E-24 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_01134 3441b34e54d6afcfc61ff885f726ba82 471 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 206 235 4.3E-15 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMC99_01134 3441b34e54d6afcfc61ff885f726ba82 471 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 158 187 4.3E-15 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMC99_01134 3441b34e54d6afcfc61ff885f726ba82 471 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 129 156 4.3E-15 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 AMC99_01134 3441b34e54d6afcfc61ff885f726ba82 471 SUPERFAMILY SSF58104 15 288 6.02E-41 T 11-10-2018 AMC99_00452 9f5b2f487f85e22eb671ccbcc4fa192b 298 Gene3D G3DSA:2.60.120.200 28 297 3.3E-66 T 11-10-2018 AMC99_00452 9f5b2f487f85e22eb671ccbcc4fa192b 298 SUPERFAMILY SSF49899 32 292 7.0E-61 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily AMC99_00452 9f5b2f487f85e22eb671ccbcc4fa192b 298 Pfam PF00722 Glycosyl hydrolases family 16 110 262 3.3E-30 T 11-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMC99_02667 8709c6c4f4c43747c9e2c4f30a03e6c3 178 Gene3D G3DSA:3.40.50.2020 1 178 1.5E-60 T 11-10-2018 AMC99_02667 8709c6c4f4c43747c9e2c4f30a03e6c3 178 Pfam PF00156 Phosphoribosyl transferase domain 51 144 3.9E-11 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMC99_02667 8709c6c4f4c43747c9e2c4f30a03e6c3 178 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 7 174 9.2E-60 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AMC99_02667 8709c6c4f4c43747c9e2c4f30a03e6c3 178 SUPERFAMILY SSF53271 4 174 3.41E-50 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMC99_02667 8709c6c4f4c43747c9e2c4f30a03e6c3 178 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 6 175 34.317 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 AMC99_01043 803b5b34de58284191d4a97b28e584f7 368 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 263 269 - T 11-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMC99_01043 803b5b34de58284191d4a97b28e584f7 368 PIRSF PIRSF000138 1 368 6.7E-121 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 AMC99_01043 803b5b34de58284191d4a97b28e584f7 368 Gene3D G3DSA:3.20.20.70 1 368 1.6E-122 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01043 803b5b34de58284191d4a97b28e584f7 368 SUPERFAMILY SSF51395 2 367 9.77E-94 T 11-10-2018 AMC99_01043 803b5b34de58284191d4a97b28e584f7 368 Pfam PF01070 FMN-dependent dehydrogenase 2 365 1.1E-127 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 AMC99_00279 b82ec6b84f2f212ad39b7609d0f37c56 305 SUPERFAMILY SSF52768 4 284 9.11E-72 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AMC99_00279 b82ec6b84f2f212ad39b7609d0f37c56 305 PRINTS PR01270 Histone deacetylase superfamily signature 114 137 7.9E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_00279 b82ec6b84f2f212ad39b7609d0f37c56 305 PRINTS PR01270 Histone deacetylase superfamily signature 222 232 7.9E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_00279 b82ec6b84f2f212ad39b7609d0f37c56 305 PRINTS PR01270 Histone deacetylase superfamily signature 148 163 7.9E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_00279 b82ec6b84f2f212ad39b7609d0f37c56 305 Gene3D G3DSA:3.40.800.20 6 301 2.2E-57 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_00279 b82ec6b84f2f212ad39b7609d0f37c56 305 Pfam PF00850 Histone deacetylase domain 28 284 1.4E-44 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 SUPERFAMILY SSF55781 132 309 3.93E-58 T 11-10-2018 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Gene3D G3DSA:3.40.50.2300 737 851 1.4E-28 T 11-10-2018 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 PIRSF PIRSF036397 1 850 1.8E-278 T 11-10-2018 IPR009219 Bacteriophytochrome, CheY-like AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Gene3D G3DSA:3.30.450.40 10 475 1.7E-157 T 11-10-2018 IPR029016 GAF-like domain superfamily AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF08446 PAS fold 13 118 3.1E-17 T 11-10-2018 IPR013654 PAS fold-2 GO:0006355 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 SMART SM00911 523 605 1.5E-24 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 SMART SM00065 144 317 1.3E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 SMART SM00448 740 848 3.7E-4 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 SUPERFAMILY SSF55781 322 503 3.63E-45 T 11-10-2018 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 SUPERFAMILY SSF52172 740 848 3.84E-13 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF07536 HWE histidine kinase 523 604 1.2E-20 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Gene3D G3DSA:3.30.565.10 580 712 8.4E-8 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 PRINTS PR01033 Phytochrome signature 462 480 8.3E-16 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 PRINTS PR01033 Phytochrome signature 428 447 8.3E-16 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 PRINTS PR01033 Phytochrome signature 245 266 8.3E-16 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 PRINTS PR01033 Phytochrome signature 159 178 8.3E-16 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF00072 Response regulator receiver domain 742 847 4.7E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF00360 Phytochrome region 323 501 2.3E-45 T 11-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 SUPERFAMILY SSF55785 4 119 9.42E-29 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Pfam PF01590 GAF domain 145 308 1.5E-16 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Gene3D G3DSA:3.30.450.20 20 246 1.7E-157 T 11-10-2018 AMC99_02210 f535b3a89d503fbfcb4b38eac385b59d 852 Gene3D G3DSA:3.30.450.270 313 492 1.7E-157 T 11-10-2018 AMC99_02575 5c9ea0fb8bf7cd30f7d5dde34f31c8b2 213 Pfam PF06912 Protein of unknown function (DUF1275) 11 201 3.6E-28 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 AMC99_02504 31b2b2a40e3f5313ba84866b0e88c53a 341 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 278 298 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AMC99_02504 31b2b2a40e3f5313ba84866b0e88c53a 341 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 75 94 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AMC99_02504 31b2b2a40e3f5313ba84866b0e88c53a 341 Pfam PF01180 Dihydroorotate dehydrogenase 40 326 6.6E-96 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMC99_02504 31b2b2a40e3f5313ba84866b0e88c53a 341 PIRSF PIRSF000164 11 341 2.4E-104 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 AMC99_02504 31b2b2a40e3f5313ba84866b0e88c53a 341 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 322 41.77 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AMC99_02504 31b2b2a40e3f5313ba84866b0e88c53a 341 SUPERFAMILY SSF51395 3 340 1.22E-103 T 11-10-2018 AMC99_02504 31b2b2a40e3f5313ba84866b0e88c53a 341 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 5 340 4.5E-116 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AMC99_02504 31b2b2a40e3f5313ba84866b0e88c53a 341 Gene3D G3DSA:3.20.20.70 1 341 3.3E-130 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00851 4f314fbe6e7e8d2a9dc2f656f27152c0 206 Gene3D G3DSA:1.20.1440.20 20 197 4.3E-46 T 11-10-2018 IPR023353 LemA-like domain superfamily AMC99_00851 4f314fbe6e7e8d2a9dc2f656f27152c0 206 Pfam PF04011 LemA family 11 195 1.9E-49 T 11-10-2018 IPR007156 LemA AMC99_00851 4f314fbe6e7e8d2a9dc2f656f27152c0 206 SUPERFAMILY SSF140478 30 183 4.05E-41 T 11-10-2018 IPR023353 LemA-like domain superfamily AMC99_00030 155334675f643ad3e0ef28cb462c8d7b 657 Gene3D G3DSA:3.90.1530.30 16 74 5.4E-5 T 11-10-2018 AMC99_00030 155334675f643ad3e0ef28cb462c8d7b 657 SMART SM00470 3 100 1.2E-11 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AMC99_00030 155334675f643ad3e0ef28cb462c8d7b 657 Gene3D G3DSA:1.10.10.2830 87 191 7.0E-19 T 11-10-2018 AMC99_00030 155334675f643ad3e0ef28cb462c8d7b 657 SUPERFAMILY SSF110849 3 102 9.07E-15 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AMC99_00030 155334675f643ad3e0ef28cb462c8d7b 657 Pfam PF02195 ParB-like nuclease domain 4 99 3.2E-13 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AMC99_00030 155334675f643ad3e0ef28cb462c8d7b 657 SUPERFAMILY SSF109709 93 186 2.62E-21 T 11-10-2018 AMC99_00635 49f91780845930d5cd832cdb37be9585 557 Gene3D G3DSA:3.40.50.300 3 287 2.3E-78 T 11-10-2018 AMC99_00635 49f91780845930d5cd832cdb37be9585 557 Pfam PF00005 ABC transporter 342 475 1.6E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_00635 49f91780845930d5cd832cdb37be9585 557 SUPERFAMILY SSF52540 312 524 3.81E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00635 49f91780845930d5cd832cdb37be9585 557 SUPERFAMILY SSF52540 9 246 1.68E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00635 49f91780845930d5cd832cdb37be9585 557 Pfam PF12848 ABC transporter 232 305 7.7E-15 T 11-10-2018 IPR032781 ABC-transporter extension domain AMC99_00635 49f91780845930d5cd832cdb37be9585 557 Gene3D G3DSA:3.40.50.300 288 556 1.3E-71 T 11-10-2018 AMC99_00635 49f91780845930d5cd832cdb37be9585 557 Pfam PF00005 ABC transporter 24 193 1.4E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_00635 49f91780845930d5cd832cdb37be9585 557 SMART SM00382 350 526 2.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00635 49f91780845930d5cd832cdb37be9585 557 SMART SM00382 33 234 1.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00635 49f91780845930d5cd832cdb37be9585 557 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 555 2.1E-286 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 AMC99_00803 a35992d5c2df1d031ecb3f2c04e07969 167 Gene3D G3DSA:3.90.960.10 3 164 1.3E-45 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMC99_00803 a35992d5c2df1d031ecb3f2c04e07969 167 Pfam PF04073 Aminoacyl-tRNA editing domain 25 149 8.8E-27 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMC99_00803 a35992d5c2df1d031ecb3f2c04e07969 167 SUPERFAMILY SSF55826 5 159 1.96E-41 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 PIRSF PIRSF000188 1 354 1.3E-126 T 11-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 222 335 1.8E-9 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 23 131 5.8E-22 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 Gene3D G3DSA:3.40.50.720 135 345 1.0E-125 T 11-10-2018 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 179 199 2.9E-14 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 67 81 2.9E-14 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 289 300 2.9E-14 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 SUPERFAMILY SSF51735 147 350 3.14E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 SUPERFAMILY SSF53223 6 142 9.28E-40 T 11-10-2018 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 SMART SM00839 147 353 3.6E-41 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 AMC99_00700 f3eccdda4da636ed12fd6591dba2d061 354 Gene3D G3DSA:3.40.50.10860 12 352 1.0E-125 T 11-10-2018 AMC99_00786 e88fd15aefa61e7ce91c1406f7a0bfe7 384 PRINTS PR01270 Histone deacetylase superfamily signature 254 264 2.0E-18 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_00786 e88fd15aefa61e7ce91c1406f7a0bfe7 384 PRINTS PR01270 Histone deacetylase superfamily signature 142 165 2.0E-18 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_00786 e88fd15aefa61e7ce91c1406f7a0bfe7 384 PRINTS PR01270 Histone deacetylase superfamily signature 175 190 2.0E-18 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_00786 e88fd15aefa61e7ce91c1406f7a0bfe7 384 Pfam PF00850 Histone deacetylase domain 41 316 4.9E-59 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_00786 e88fd15aefa61e7ce91c1406f7a0bfe7 384 Gene3D G3DSA:3.40.800.20 17 381 1.0E-96 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_00786 e88fd15aefa61e7ce91c1406f7a0bfe7 384 SUPERFAMILY SSF52768 20 335 1.58E-86 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AMC99_01960 d833c3bdbe954fedc6994eb5162d0629 93 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 13 88 1.4E-22 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMC99_01960 d833c3bdbe954fedc6994eb5162d0629 93 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 1 93 19.887 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMC99_01960 d833c3bdbe954fedc6994eb5162d0629 93 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 1 93 1.2E-23 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMC99_01960 d833c3bdbe954fedc6994eb5162d0629 93 Gene3D G3DSA:1.10.20.60 1 91 1.3E-25 T 11-10-2018 AMC99_01960 d833c3bdbe954fedc6994eb5162d0629 93 SUPERFAMILY SSF141000 1 91 3.53E-26 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 AMC99_00714 6862aeb430cee4d2ecaa64fc37473068 558 Pfam PF00563 EAL domain 288 517 2.4E-66 T 11-10-2018 IPR001633 EAL domain AMC99_00714 6862aeb430cee4d2ecaa64fc37473068 558 SMART SM00267 91 270 9.5E-50 T 11-10-2018 IPR000160 GGDEF domain AMC99_00714 6862aeb430cee4d2ecaa64fc37473068 558 SMART SM00052 280 522 1.6E-89 T 11-10-2018 IPR001633 EAL domain AMC99_00714 6862aeb430cee4d2ecaa64fc37473068 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 102 266 2.3E-40 T 11-10-2018 IPR000160 GGDEF domain AMC99_00714 6862aeb430cee4d2ecaa64fc37473068 558 Gene3D G3DSA:3.30.70.270 101 276 1.1E-47 T 11-10-2018 AMC99_00714 6862aeb430cee4d2ecaa64fc37473068 558 SUPERFAMILY SSF141868 287 527 6.02E-78 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_00714 6862aeb430cee4d2ecaa64fc37473068 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 100 268 1.6E-36 T 11-10-2018 IPR000160 GGDEF domain AMC99_00714 6862aeb430cee4d2ecaa64fc37473068 558 Gene3D G3DSA:3.20.20.450 281 532 4.5E-84 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_00714 6862aeb430cee4d2ecaa64fc37473068 558 SUPERFAMILY SSF55073 107 272 4.63E-42 T 11-10-2018 IPR029787 Nucleotide cyclase AMC99_00254 d1928d3244b6f24aae7ec82927c221fc 402 Gene3D G3DSA:2.40.40.10 68 392 3.5E-92 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMC99_00254 d1928d3244b6f24aae7ec82927c221fc 402 SMART SM00925 138 301 1.5E-69 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AMC99_00254 d1928d3244b6f24aae7ec82927c221fc 402 Gene3D G3DSA:2.40.240.50 137 306 3.5E-92 T 11-10-2018 AMC99_00254 d1928d3244b6f24aae7ec82927c221fc 402 Pfam PF06725 3D domain 320 389 6.8E-21 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 AMC99_00254 d1928d3244b6f24aae7ec82927c221fc 402 SUPERFAMILY SSF50685 63 395 1.29E-102 T 11-10-2018 IPR036908 RlpA-like domain superfamily AMC99_00254 d1928d3244b6f24aae7ec82927c221fc 402 PIRSF PIRSF019422 2 402 1.0E-103 T 11-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A AMC99_00254 d1928d3244b6f24aae7ec82927c221fc 402 Pfam PF03562 MltA specific insert domain 66 301 1.6E-61 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.8E-62 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 SMART SM00649 9 141 2.1E-79 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 SUPERFAMILY SSF46906 68 140 1.83E-23 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.0E-21 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 Gene3D G3DSA:1.10.10.2720 73 143 8.4E-26 T 11-10-2018 AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 SUPERFAMILY SSF54747 3 72 2.88E-29 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 9.0E-14 T 11-10-2018 AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 Gene3D G3DSA:3.30.1550.10 2 72 2.9E-35 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMC99_02185 37ea08605b6c1880922726f8eeafcdfa 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 29.873 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMC99_00291 b18d3cb85932584f667df43a381a766f 324 Gene3D G3DSA:3.40.50.300 10 210 6.6E-50 T 11-10-2018 AMC99_00291 b18d3cb85932584f667df43a381a766f 324 PIRSF PIRSF002849 1 324 1.6E-127 T 11-10-2018 AMC99_00291 b18d3cb85932584f667df43a381a766f 324 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 46 176 7.3E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 AMC99_00291 b18d3cb85932584f667df43a381a766f 324 SUPERFAMILY SSF52540 15 296 5.1E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00291 b18d3cb85932584f667df43a381a766f 324 Gene3D G3DSA:1.10.8.300 212 320 1.2E-32 T 11-10-2018 AMC99_00291 b18d3cb85932584f667df43a381a766f 324 SMART SM00382 43 184 0.0037 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 12 337 2.7E-147 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 Gene3D G3DSA:3.30.420.40 158 323 1.1E-126 T 11-10-2018 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 SUPERFAMILY SSF53067 154 334 4.24E-48 T 11-10-2018 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 306 332 7.4E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 7.4E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 7.4E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 7.4E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 7.4E-59 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 Gene3D G3DSA:3.30.420.40 15 333 1.1E-126 T 11-10-2018 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 Gene3D G3DSA:3.90.640.10 190 265 1.1E-126 T 11-10-2018 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 Pfam PF06723 MreB/Mbl protein 13 337 1.4E-138 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AMC99_01099 e107202c85da85440823cc3b8f7cdd5b 347 SUPERFAMILY SSF53067 14 150 7.0E-36 T 11-10-2018 AMC99_00376 6d433bd3a48a2a4f48d92aa8c3496ece 165 SUPERFAMILY SSF54427 27 141 8.54E-11 T 11-10-2018 IPR032710 NTF2-like domain superfamily AMC99_00376 6d433bd3a48a2a4f48d92aa8c3496ece 165 Pfam PF14534 Domain of unknown function (DUF4440) 35 141 8.3E-6 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 AMC99_00376 6d433bd3a48a2a4f48d92aa8c3496ece 165 Gene3D G3DSA:3.10.450.50 19 143 1.4E-9 T 11-10-2018 AMC99_02091 8f0cebce885dc137d7e3bd1648806875 92 Pfam PF00188 Cysteine-rich secretory protein family 31 71 6.7E-8 T 11-10-2018 IPR014044 CAP domain AMC99_02091 8f0cebce885dc137d7e3bd1648806875 92 PRINTS PR00837 Allergen V5/Tpx-1 family signature 40 56 7.4E-7 T 11-10-2018 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_02091 8f0cebce885dc137d7e3bd1648806875 92 PRINTS PR00837 Allergen V5/Tpx-1 family signature 66 79 7.4E-7 T 11-10-2018 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related AMC99_02091 8f0cebce885dc137d7e3bd1648806875 92 SUPERFAMILY SSF55797 7 80 4.06E-15 T 11-10-2018 IPR035940 CAP superfamily AMC99_02091 8f0cebce885dc137d7e3bd1648806875 92 Gene3D G3DSA:3.40.33.10 3 91 1.4E-14 T 11-10-2018 IPR035940 CAP superfamily AMC99_02091 8f0cebce885dc137d7e3bd1648806875 92 ProSitePatterns PS01009 CRISP family signature 1. 41 51 - T 11-10-2018 IPR018244 Allergen V5/Tpx-1-related, conserved site GO:0005576 AMC99_01287 8ad7b7153b48a41059ff632c47e71184 371 Gene3D G3DSA:3.40.50.300 11 178 4.7E-17 T 11-10-2018 AMC99_01287 8ad7b7153b48a41059ff632c47e71184 371 SUPERFAMILY SSF52540 51 185 2.83E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01287 8ad7b7153b48a41059ff632c47e71184 371 Pfam PF03969 AFG1-like ATPase 6 364 3.7E-113 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 AMC99_02214 a5976957b31ed6e495c19d8dfb90f705 1145 SUPERFAMILY SSF49464 32 127 9.42E-15 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily AMC99_02214 a5976957b31ed6e495c19d8dfb90f705 1145 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 113 2.4E-18 T 11-10-2018 AMC99_02214 a5976957b31ed6e495c19d8dfb90f705 1145 SUPERFAMILY SSF56935 124 1080 7.33E-51 T 11-10-2018 AMC99_02214 a5976957b31ed6e495c19d8dfb90f705 1145 Gene3D G3DSA:2.60.40.1120 31 115 2.5E-14 T 11-10-2018 AMC99_01320 b66d7b20bdb0bacc9ef45da02a67f1e7 532 Gene3D G3DSA:3.30.300.310 427 530 1.4E-33 T 11-10-2018 AMC99_01320 b66d7b20bdb0bacc9ef45da02a67f1e7 532 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_01320 b66d7b20bdb0bacc9ef45da02a67f1e7 532 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 515 7.1E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_01320 b66d7b20bdb0bacc9ef45da02a67f1e7 532 SUPERFAMILY SSF56801 6 528 7.72E-127 T 11-10-2018 AMC99_01320 b66d7b20bdb0bacc9ef45da02a67f1e7 532 Pfam PF00501 AMP-binding enzyme 19 431 3.2E-79 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_01320 b66d7b20bdb0bacc9ef45da02a67f1e7 532 Gene3D G3DSA:3.40.50.12780 2 426 1.9E-107 T 11-10-2018 AMC99_02066 d4e86e631d9d02636d0ce3ab64aee0cc 451 Pfam PF01554 MatE 247 407 2.9E-23 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_02066 d4e86e631d9d02636d0ce3ab64aee0cc 451 Pfam PF01554 MatE 22 181 1.4E-29 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_02066 d4e86e631d9d02636d0ce3ab64aee0cc 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 414 1.4E-63 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_02066 d4e86e631d9d02636d0ce3ab64aee0cc 451 PIRSF PIRSF006603 1 447 3.9E-94 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_02776 cfd159a01c74d073d4fc79e7d45e62c7 273 Gene3D G3DSA:3.40.50.150 78 273 2.1E-54 T 11-10-2018 AMC99_02776 cfd159a01c74d073d4fc79e7d45e62c7 273 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 24 270 5.2E-76 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMC99_02776 cfd159a01c74d073d4fc79e7d45e62c7 273 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 273 38.423 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMC99_02776 cfd159a01c74d073d4fc79e7d45e62c7 273 Pfam PF13847 Methyltransferase domain 107 238 1.6E-10 T 11-10-2018 IPR025714 Methyltransferase domain AMC99_02776 cfd159a01c74d073d4fc79e7d45e62c7 273 Gene3D G3DSA:1.10.8.10 1 77 1.3E-22 T 11-10-2018 AMC99_02776 cfd159a01c74d073d4fc79e7d45e62c7 273 SUPERFAMILY SSF53335 1 262 1.86E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02776 cfd159a01c74d073d4fc79e7d45e62c7 273 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMC99_02776 cfd159a01c74d073d4fc79e7d45e62c7 273 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 2 270 2.3E-56 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMC99_01107 12aeb8f4e26d852ac04b3f873e7e0712 228 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 185 1.2E-43 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMC99_01107 12aeb8f4e26d852ac04b3f873e7e0712 228 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 186 29.834 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMC99_01107 12aeb8f4e26d852ac04b3f873e7e0712 228 Gene3D G3DSA:2.170.120.20 98 188 3.5E-24 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal AMC99_01107 12aeb8f4e26d852ac04b3f873e7e0712 228 Pfam PF01386 Ribosomal L25p family 8 94 6.0E-26 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMC99_01107 12aeb8f4e26d852ac04b3f873e7e0712 228 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 187 4.6E-27 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain AMC99_01107 12aeb8f4e26d852ac04b3f873e7e0712 228 Gene3D G3DSA:2.40.240.10 4 97 1.6E-30 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMC99_01107 12aeb8f4e26d852ac04b3f873e7e0712 228 SUPERFAMILY SSF50715 5 194 1.92E-58 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AMC99_01107 12aeb8f4e26d852ac04b3f873e7e0712 228 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 9 97 3.0E-39 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AMC99_02606 eee9ee9423d01d3f13ae481a7afd253b 369 Pfam PF00534 Glycosyl transferases group 1 283 340 4.9E-8 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMC99_02606 eee9ee9423d01d3f13ae481a7afd253b 369 SUPERFAMILY SSF53756 26 364 9.42E-29 T 11-10-2018 AMC99_02606 eee9ee9423d01d3f13ae481a7afd253b 369 Gene3D G3DSA:3.40.50.2000 284 346 2.1E-13 T 11-10-2018 AMC99_02606 eee9ee9423d01d3f13ae481a7afd253b 369 Gene3D G3DSA:3.40.50.2000 176 234 2.0E-8 T 11-10-2018 AMC99_02606 eee9ee9423d01d3f13ae481a7afd253b 369 Gene3D G3DSA:3.40.50.2000 66 175 2.0E-8 T 11-10-2018 AMC99_02184 7ef6ef99a95def6e728518b9b23813c3 230 Pfam PF00687 Ribosomal protein L1p/L10e family 30 218 6.3E-53 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMC99_02184 7ef6ef99a95def6e728518b9b23813c3 230 SUPERFAMILY SSF56808 8 224 2.09E-81 T 11-10-2018 IPR023674 Ribosomal protein L1-like AMC99_02184 7ef6ef99a95def6e728518b9b23813c3 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 227 42.167 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMC99_02184 7ef6ef99a95def6e728518b9b23813c3 230 Gene3D G3DSA:3.40.50.790 66 157 8.5E-81 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMC99_02184 7ef6ef99a95def6e728518b9b23813c3 230 Gene3D G3DSA:3.30.190.20 20 223 8.5E-81 T 11-10-2018 AMC99_02184 7ef6ef99a95def6e728518b9b23813c3 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 118 137 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_02184 7ef6ef99a95def6e728518b9b23813c3 230 PIRSF PIRSF002155 1 225 4.6E-73 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_02184 7ef6ef99a95def6e728518b9b23813c3 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 5.6E-97 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMC99_01945 565d71906aa7bf335c2cdf32f0b71bef 351 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 297 339 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMC99_01945 565d71906aa7bf335c2cdf32f0b71bef 351 Pfam PF12833 Helix-turn-helix domain 267 344 2.2E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_01945 565d71906aa7bf335c2cdf32f0b71bef 351 SMART SM00342 261 343 9.1E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_01945 565d71906aa7bf335c2cdf32f0b71bef 351 Gene3D G3DSA:1.10.10.60 240 349 6.7E-21 T 11-10-2018 AMC99_01945 565d71906aa7bf335c2cdf32f0b71bef 351 SUPERFAMILY SSF46689 296 346 2.37E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01945 565d71906aa7bf335c2cdf32f0b71bef 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 327 2.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMC99_01945 565d71906aa7bf335c2cdf32f0b71bef 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 327 343 2.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMC99_00739 5bfd908cdd1dd01da27b008213208a33 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 2.0E-35 T 11-10-2018 AMC99_00739 5bfd908cdd1dd01da27b008213208a33 89 SUPERFAMILY SSF47060 3 89 6.18E-37 T 11-10-2018 IPR009068 S15/NS1, RNA-binding AMC99_00739 5bfd908cdd1dd01da27b008213208a33 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00739 5bfd908cdd1dd01da27b008213208a33 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.3E-39 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00739 5bfd908cdd1dd01da27b008213208a33 89 Pfam PF00312 Ribosomal protein S15 8 88 4.5E-39 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00739 5bfd908cdd1dd01da27b008213208a33 89 SMART SM01387 8 88 5.2E-54 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_00739 5bfd908cdd1dd01da27b008213208a33 89 Gene3D G3DSA:1.10.287.10 1 89 2.8E-37 T 11-10-2018 AMC99_00739 5bfd908cdd1dd01da27b008213208a33 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.755 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01137 a493a7e7451414791eeb6ea9a785eafe 402 SUPERFAMILY SSF82784 230 397 2.49E-42 T 11-10-2018 IPR036102 OsmC/Ohr superfamily AMC99_01137 a493a7e7451414791eeb6ea9a785eafe 402 Gene3D G3DSA:3.30.300.20 263 401 2.5E-39 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AMC99_01137 a493a7e7451414791eeb6ea9a785eafe 402 SUPERFAMILY SSF53474 1 253 1.02E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01137 a493a7e7451414791eeb6ea9a785eafe 402 Pfam PF12146 Serine aminopeptidase, S33 43 132 2.0E-10 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMC99_01137 a493a7e7451414791eeb6ea9a785eafe 402 Gene3D G3DSA:3.40.50.1820 2 257 1.3E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01137 a493a7e7451414791eeb6ea9a785eafe 402 Pfam PF02566 OsmC-like protein 296 396 3.7E-18 T 11-10-2018 IPR003718 OsmC/Ohr family AMC99_01237 37d989a702a30abfec172dfb3762376a 459 Gene3D G3DSA:3.30.565.10 302 457 2.2E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01237 37d989a702a30abfec172dfb3762376a 459 Gene3D G3DSA:1.10.287.130 248 301 2.2E-43 T 11-10-2018 AMC99_01237 37d989a702a30abfec172dfb3762376a 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 4.8E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01237 37d989a702a30abfec172dfb3762376a 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 4.8E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01237 37d989a702a30abfec172dfb3762376a 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 4.8E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01237 37d989a702a30abfec172dfb3762376a 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 4.8E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01237 37d989a702a30abfec172dfb3762376a 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 458 1.2E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01237 37d989a702a30abfec172dfb3762376a 459 SUPERFAMILY SSF55874 293 458 7.73E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01237 37d989a702a30abfec172dfb3762376a 459 SMART SM00387 350 459 1.2E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01237 37d989a702a30abfec172dfb3762376a 459 SUPERFAMILY SSF47384 248 304 3.92E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_00037 55193f428c446b537e214b03bca08d18 297 Pfam PF02481 DNA recombination-mediator protein A 79 287 1.6E-65 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMC99_00037 55193f428c446b537e214b03bca08d18 297 Gene3D G3DSA:3.40.50.450 34 297 5.8E-66 T 11-10-2018 AMC99_00037 55193f428c446b537e214b03bca08d18 297 SUPERFAMILY SSF102405 89 296 9.62E-35 T 11-10-2018 AMC99_01446 b317d5bac77ff99c11391a4cfe650018 575 Pfam PF07690 Major Facilitator Superfamily 31 310 1.8E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_01446 b317d5bac77ff99c11391a4cfe650018 575 Gene3D G3DSA:1.20.1250.20 19 219 1.3E-9 T 11-10-2018 AMC99_01446 b317d5bac77ff99c11391a4cfe650018 575 SUPERFAMILY SSF103473 23 555 2.7E-17 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_01606 311611415e7328095b01de2911525f17 154 Pfam PF00583 Acetyltransferase (GNAT) family 14 127 1.5E-13 T 11-10-2018 IPR000182 GNAT domain AMC99_01606 311611415e7328095b01de2911525f17 154 SUPERFAMILY SSF55729 9 150 2.4E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01606 311611415e7328095b01de2911525f17 154 Gene3D G3DSA:3.40.630.30 1 154 8.7E-28 T 11-10-2018 AMC99_01911 8b47e71fdfb63a53964bdd42450c8bf8 219 SUPERFAMILY SSF46785 5 79 5.44E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01911 8b47e71fdfb63a53964bdd42450c8bf8 219 Gene3D G3DSA:1.10.10.10 81 176 4.8E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01911 8b47e71fdfb63a53964bdd42450c8bf8 219 Gene3D G3DSA:1.10.10.10 2 80 1.3E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01911 8b47e71fdfb63a53964bdd42450c8bf8 219 SUPERFAMILY SSF46785 85 158 3.88E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01911 8b47e71fdfb63a53964bdd42450c8bf8 219 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 9 169 4.3E-30 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMC99_01911 8b47e71fdfb63a53964bdd42450c8bf8 219 PIRSF PIRSF019345 2 205 3.7E-54 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMC99_01911 8b47e71fdfb63a53964bdd42450c8bf8 219 Pfam PF04079 Segregation and condensation complex subunit ScpB 11 166 7.5E-49 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMC99_01556 bb17b6f921d5cea4a6a8d35534c5d20f 350 Gene3D G3DSA:1.10.10.2520 112 200 2.0E-22 T 11-10-2018 AMC99_01556 bb17b6f921d5cea4a6a8d35534c5d20f 350 Pfam PF07486 Cell Wall Hydrolase 128 236 1.3E-25 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 AMC99_00802 91a9871f9c8143f1751d38cf1391803c 368 SUPERFAMILY SSF51735 160 333 5.07E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00802 91a9871f9c8143f1751d38cf1391803c 368 Gene3D G3DSA:3.90.180.10 6 363 2.2E-143 T 11-10-2018 AMC99_00802 91a9871f9c8143f1751d38cf1391803c 368 Gene3D G3DSA:3.40.50.720 174 311 2.2E-143 T 11-10-2018 AMC99_00802 91a9871f9c8143f1751d38cf1391803c 368 SUPERFAMILY SSF50129 1 188 6.39E-69 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_00802 91a9871f9c8143f1751d38cf1391803c 368 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMC99_00802 91a9871f9c8143f1751d38cf1391803c 368 Pfam PF00107 Zinc-binding dehydrogenase 197 317 1.4E-22 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_00802 91a9871f9c8143f1751d38cf1391803c 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 112 5.6E-23 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_00802 91a9871f9c8143f1751d38cf1391803c 368 SUPERFAMILY SSF50129 317 368 1.46E-12 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_00802 91a9871f9c8143f1751d38cf1391803c 368 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 367 4.4E-186 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 AMC99_01890 7ccad9d2ae309d5bafbf0592703c12c7 308 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 299 2.0E-105 T 11-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMC99_01890 7ccad9d2ae309d5bafbf0592703c12c7 308 SMART SM00859 4 105 5.8E-18 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_01890 7ccad9d2ae309d5bafbf0592703c12c7 308 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 299 47.295 T 11-10-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMC99_01890 7ccad9d2ae309d5bafbf0592703c12c7 308 Gene3D G3DSA:3.30.360.10 118 284 3.8E-31 T 11-10-2018 AMC99_01890 7ccad9d2ae309d5bafbf0592703c12c7 308 Gene3D G3DSA:3.40.50.720 2 117 2.8E-16 T 11-10-2018 AMC99_01890 7ccad9d2ae309d5bafbf0592703c12c7 308 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 109 125 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AMC99_01890 7ccad9d2ae309d5bafbf0592703c12c7 308 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 100 2.0E-9 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_01890 7ccad9d2ae309d5bafbf0592703c12c7 308 SUPERFAMILY SSF51735 1 136 2.96E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01890 7ccad9d2ae309d5bafbf0592703c12c7 308 SUPERFAMILY SSF55347 114 280 2.88E-32 T 11-10-2018 AMC99_01928 dca33045342f80275125875de327ae50 323 Pfam PF00482 Type II secretion system (T2SS), protein F 156 280 2.0E-25 T 11-10-2018 IPR018076 Type II secretion system F domain AMC99_01928 dca33045342f80275125875de327ae50 323 Gene3D G3DSA:1.20.81.30 152 259 4.5E-12 T 11-10-2018 AMC99_01304 51684e74e2134a9c28957ac2c6a2e0c0 105 Gene3D G3DSA:1.10.1200.10 24 102 9.4E-16 T 11-10-2018 IPR036736 ACP-like superfamily AMC99_01304 51684e74e2134a9c28957ac2c6a2e0c0 105 Pfam PF00550 Phosphopantetheine attachment site 25 94 3.6E-8 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AMC99_01304 51684e74e2134a9c28957ac2c6a2e0c0 105 SUPERFAMILY SSF47336 25 100 1.73E-9 T 11-10-2018 IPR036736 ACP-like superfamily AMC99_01352 89916b71792196c814fb72ae7360e57f 436 Gene3D G3DSA:3.40.630.10 44 419 4.9E-99 T 11-10-2018 AMC99_01352 89916b71792196c814fb72ae7360e57f 436 SUPERFAMILY SSF55031 222 339 1.57E-9 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AMC99_01352 89916b71792196c814fb72ae7360e57f 436 Pfam PF07687 Peptidase dimerisation domain 215 331 3.5E-13 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AMC99_01352 89916b71792196c814fb72ae7360e57f 436 Pfam PF01546 Peptidase family M20/M25/M40 107 420 3.5E-21 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AMC99_01352 89916b71792196c814fb72ae7360e57f 436 SUPERFAMILY SSF53187 28 429 9.14E-39 T 11-10-2018 AMC99_01352 89916b71792196c814fb72ae7360e57f 436 Gene3D G3DSA:3.30.70.360 217 341 4.9E-99 T 11-10-2018 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 350 367 7.5E-27 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.5E-27 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 312 327 7.5E-27 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 112 135 7.5E-27 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 188 203 7.5E-27 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 392 411 7.5E-27 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 624 2.1E-95 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 52 622 1.1E-174 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 Pfam PF01578 Cytochrome C assembly protein 88 294 9.6E-47 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 1.6E-85 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 79 105 1.6E-85 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 1.6E-85 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 1.6E-85 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 1.6E-85 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 1.6E-85 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 1.6E-85 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00704 be74d2cd70b4b57c52eb5f92b6ec8304 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 1.6E-85 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00950 a6d4f1872f38413ac61133c21b6a50bc 238 SUPERFAMILY SSF53448 8 232 5.41E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00950 a6d4f1872f38413ac61133c21b6a50bc 238 Gene3D G3DSA:3.90.550.10 8 237 3.8E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00950 a6d4f1872f38413ac61133c21b6a50bc 238 Pfam PF00483 Nucleotidyl transferase 9 114 8.6E-14 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMC99_00862 69c872eadafce09f6ecadc4b7a04d9f4 488 SUPERFAMILY SSF54534 351 447 1.5E-7 T 11-10-2018 AMC99_00862 69c872eadafce09f6ecadc4b7a04d9f4 488 SUPERFAMILY SSF109998 96 262 1.79E-30 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMC99_00862 69c872eadafce09f6ecadc4b7a04d9f4 488 Gene3D G3DSA:3.10.50.40 234 342 5.3E-31 T 11-10-2018 AMC99_00862 69c872eadafce09f6ecadc4b7a04d9f4 488 Pfam PF09312 SurA N-terminal domain 97 209 2.7E-13 T 11-10-2018 IPR015391 SurA N-terminal AMC99_00862 69c872eadafce09f6ecadc4b7a04d9f4 488 Pfam PF00639 PPIC-type PPIASE domain 251 336 6.5E-14 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AMC99_00862 69c872eadafce09f6ecadc4b7a04d9f4 488 SUPERFAMILY SSF54534 238 339 2.03E-19 T 11-10-2018 AMC99_00862 69c872eadafce09f6ecadc4b7a04d9f4 488 Gene3D G3DSA:1.10.4030.10 93 215 3.6E-23 T 11-10-2018 AMC99_02430 c0beba8b09fbb9f7de84d0044fdabce8 216 SUPERFAMILY SSF141371 22 97 4.32E-5 T 11-10-2018 AMC99_02430 c0beba8b09fbb9f7de84d0044fdabce8 216 SUPERFAMILY SSF141371 116 191 6.87E-7 T 11-10-2018 AMC99_02430 c0beba8b09fbb9f7de84d0044fdabce8 216 Pfam PF07238 PilZ domain 117 198 4.1E-6 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMC99_02661 3f3db27b3143f7831ebdb2de9e6392bb 262 SUPERFAMILY SSF51735 6 261 5.04E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02661 3f3db27b3143f7831ebdb2de9e6392bb 262 Gene3D G3DSA:3.40.50.720 1 262 5.7E-81 T 11-10-2018 AMC99_02083 db34f3ab04e20cdec262b887cd4deb80 760 SUPERFAMILY SSF56935 30 760 8.63E-117 T 11-10-2018 AMC99_02083 db34f3ab04e20cdec262b887cd4deb80 760 Gene3D G3DSA:2.40.170.20 45 760 5.5E-136 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_02083 db34f3ab04e20cdec262b887cd4deb80 760 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 159 4.7E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_02083 db34f3ab04e20cdec262b887cd4deb80 760 Pfam PF00593 TonB dependent receptor 286 758 3.6E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02157 72874820e3cb53ec4ac16baa9da67c63 442 SUPERFAMILY SSF56954 9 438 5.49E-83 T 11-10-2018 AMC99_02157 72874820e3cb53ec4ac16baa9da67c63 442 Gene3D G3DSA:2.20.200.10 57 323 1.5E-104 T 11-10-2018 AMC99_02157 72874820e3cb53ec4ac16baa9da67c63 442 Pfam PF02321 Outer membrane efflux protein 21 222 2.1E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_02157 72874820e3cb53ec4ac16baa9da67c63 442 Pfam PF02321 Outer membrane efflux protein 253 432 2.3E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_02157 72874820e3cb53ec4ac16baa9da67c63 442 Gene3D G3DSA:1.20.1600.10 10 435 1.5E-104 T 11-10-2018 AMC99_02157 72874820e3cb53ec4ac16baa9da67c63 442 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 3 434 4.1E-82 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 AMC99_00464 c614b33f27c2903136b53609480b599a 270 Gene3D G3DSA:3.40.50.720 1 260 1.0E-76 T 11-10-2018 AMC99_00464 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.2E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00464 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.2E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00464 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.2E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00464 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.2E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00464 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.2E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00464 c614b33f27c2903136b53609480b599a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.2E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00464 c614b33f27c2903136b53609480b599a 270 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 8.0E-62 T 11-10-2018 AMC99_00464 c614b33f27c2903136b53609480b599a 270 SUPERFAMILY SSF51735 2 253 2.93E-74 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00464 c614b33f27c2903136b53609480b599a 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.7E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00464 c614b33f27c2903136b53609480b599a 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.7E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00464 c614b33f27c2903136b53609480b599a 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.7E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00055 8c00c10cb93de0e1cc7d486a15ff9c49 274 SMART SM00507 189 252 0.0021 T 11-10-2018 IPR003615 HNH nuclease AMC99_00055 8c00c10cb93de0e1cc7d486a15ff9c49 274 Pfam PF01844 HNH endonuclease 213 257 8.7E-6 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 AMC99_00688 85dfc2e93bc6c16847b008ffdda6bcc1 227 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 171 188 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 AMC99_00688 85dfc2e93bc6c16847b008ffdda6bcc1 227 Gene3D G3DSA:3.40.1180.10 3 227 3.6E-84 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMC99_00688 85dfc2e93bc6c16847b008ffdda6bcc1 227 Pfam PF01255 Putative undecaprenyl diphosphate synthase 14 225 1.5E-75 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMC99_00688 85dfc2e93bc6c16847b008ffdda6bcc1 227 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 7 226 36.914 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMC99_00688 85dfc2e93bc6c16847b008ffdda6bcc1 227 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 225 1.4E-77 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AMC99_00688 85dfc2e93bc6c16847b008ffdda6bcc1 227 SUPERFAMILY SSF64005 8 221 1.14E-74 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AMC99_02812 2e52a1f99ddf5060d3794ce747252e6a 336 PRINTS PR01270 Histone deacetylase superfamily signature 150 173 6.7E-13 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_02812 2e52a1f99ddf5060d3794ce747252e6a 336 PRINTS PR01270 Histone deacetylase superfamily signature 269 279 6.7E-13 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_02812 2e52a1f99ddf5060d3794ce747252e6a 336 PRINTS PR01270 Histone deacetylase superfamily signature 183 198 6.7E-13 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_02812 2e52a1f99ddf5060d3794ce747252e6a 336 Gene3D G3DSA:3.40.800.20 1 335 1.2E-118 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_02812 2e52a1f99ddf5060d3794ce747252e6a 336 Pfam PF00850 Histone deacetylase domain 54 331 4.2E-65 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 AMC99_02812 2e52a1f99ddf5060d3794ce747252e6a 336 SUPERFAMILY SSF52768 2 334 1.44E-84 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily AMC99_02127 fc6ba0e4a01b53f6b15dabb71b679be9 134 SUPERFAMILY SSF55021 5 64 1.98E-12 T 11-10-2018 AMC99_02127 fc6ba0e4a01b53f6b15dabb71b679be9 134 SUPERFAMILY SSF55021 70 129 8.09E-18 T 11-10-2018 AMC99_02127 fc6ba0e4a01b53f6b15dabb71b679be9 134 Pfam PF10000 ACT domain 10 64 5.8E-13 T 11-10-2018 IPR018717 Domain of unknown function DUF2241 AMC99_02127 fc6ba0e4a01b53f6b15dabb71b679be9 134 Pfam PF13840 ACT domain 73 127 1.9E-9 T 11-10-2018 IPR027795 CASTOR, ACT domain AMC99_02127 fc6ba0e4a01b53f6b15dabb71b679be9 134 Gene3D G3DSA:3.30.2130.10 3 131 2.3E-36 T 11-10-2018 AMC99_02280 dfb707f549363480466db84f42fa91a8 203 Gene3D G3DSA:2.40.50.90 92 190 6.5E-14 T 11-10-2018 IPR035437 SNase-like, OB-fold superfamily AMC99_02280 dfb707f549363480466db84f42fa91a8 203 SUPERFAMILY SSF50199 95 194 7.19E-14 T 11-10-2018 AMC99_01670 2bbe2a01ad90f389a1b94e969f7b0baa 80 SUPERFAMILY SSF48295 5 69 5.18E-10 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AMC99_01670 2bbe2a01ad90f389a1b94e969f7b0baa 80 Gene3D G3DSA:1.10.10.10 7 79 3.8E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01670 2bbe2a01ad90f389a1b94e969f7b0baa 80 Pfam PF06627 Protein of unknown function (DUF1153) 12 73 5.4E-16 T 11-10-2018 IPR009534 Protein of unknown function DUF1153 AMC99_00007 b4c4d2e314c025236d6efcc0becd6045 165 SUPERFAMILY SSF53927 4 151 1.39E-34 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_00007 b4c4d2e314c025236d6efcc0becd6045 165 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 105 6.4E-20 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMC99_00007 b4c4d2e314c025236d6efcc0becd6045 165 Gene3D G3DSA:3.40.140.10 1 162 1.2E-36 T 11-10-2018 AMC99_00168 69b7f341bfe3dfd7315ee4aeaa78f8de 571 Pfam PF00005 ABC transporter 370 516 9.0E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_00168 69b7f341bfe3dfd7315ee4aeaa78f8de 571 Gene3D G3DSA:1.20.1560.10 17 314 4.1E-14 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMC99_00168 69b7f341bfe3dfd7315ee4aeaa78f8de 571 SUPERFAMILY SSF52540 342 561 3.03E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00168 69b7f341bfe3dfd7315ee4aeaa78f8de 571 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_00168 69b7f341bfe3dfd7315ee4aeaa78f8de 571 SMART SM00382 376 562 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00168 69b7f341bfe3dfd7315ee4aeaa78f8de 571 Pfam PF00664 ABC transporter transmembrane region 71 275 5.1E-8 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AMC99_00168 69b7f341bfe3dfd7315ee4aeaa78f8de 571 SUPERFAMILY SSF90123 21 313 1.44E-22 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AMC99_00168 69b7f341bfe3dfd7315ee4aeaa78f8de 571 Gene3D G3DSA:3.40.50.300 339 568 7.6E-62 T 11-10-2018 AMC99_00301 ced9eec623cc2a462058618471c775e3 294 Pfam PF03641 Possible lysine decarboxylase 156 283 3.8E-32 T 11-10-2018 IPR031100 LOG family AMC99_00301 ced9eec623cc2a462058618471c775e3 294 SUPERFAMILY SSF102405 46 285 1.98E-49 T 11-10-2018 AMC99_00301 ced9eec623cc2a462058618471c775e3 294 Gene3D G3DSA:3.40.50.450 54 288 1.0E-54 T 11-10-2018 AMC99_00745 410e348ff41d1ca0d332f1b0c041a692 300 PIRSF PIRSF006648 34 295 2.2E-18 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMC99_00745 410e348ff41d1ca0d332f1b0c041a692 300 Pfam PF01061 ABC-2 type transporter 47 258 7.1E-25 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMC99_00745 410e348ff41d1ca0d332f1b0c041a692 300 PRINTS PR00164 ABC-2 type transport system membrane protein signature 216 235 3.6E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMC99_00745 410e348ff41d1ca0d332f1b0c041a692 300 PRINTS PR00164 ABC-2 type transport system membrane protein signature 96 118 3.6E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMC99_00745 410e348ff41d1ca0d332f1b0c041a692 300 PRINTS PR00164 ABC-2 type transport system membrane protein signature 140 165 3.6E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMC99_00745 410e348ff41d1ca0d332f1b0c041a692 300 PRINTS PR00164 ABC-2 type transport system membrane protein signature 236 255 3.6E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 Hamap MF_00456 Glutamate 5-kinase [proB]. 11 264 33.801 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 Gene3D G3DSA:3.40.1160.10 2 267 3.6E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 2.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 2.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 2.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 2.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 2.3E-48 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 Gene3D G3DSA:2.30.130.10 270 371 3.3E-28 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 TIGRFAM TIGR01027 proB: glutamate 5-kinase 11 369 2.5E-110 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 Pfam PF01472 PUA domain 281 349 1.7E-17 T 11-10-2018 IPR002478 PUA domain GO:0003723 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 SUPERFAMILY SSF53633 11 262 9.29E-57 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 PIRSF PIRSF000729 7 371 3.6E-112 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 Pfam PF00696 Amino acid kinase family 12 241 3.3E-42 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 SMART SM00359 281 363 9.2E-15 T 11-10-2018 IPR002478 PUA domain GO:0003723 AMC99_01848 db067f29a62bed3432aa3953b3d7871c 371 SUPERFAMILY SSF88697 280 370 7.18E-23 T 11-10-2018 IPR015947 PUA-like superfamily AMC99_01098 6f4a0f36f67c5ccb9a38bf3dc313edcd 301 Pfam PF04085 rod shape-determining protein MreC 138 271 2.0E-24 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMC99_01098 6f4a0f36f67c5ccb9a38bf3dc313edcd 301 Gene3D G3DSA:2.40.10.350 186 257 1.3E-20 T 11-10-2018 AMC99_01098 6f4a0f36f67c5ccb9a38bf3dc313edcd 301 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 67 257 6.3E-30 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMC99_01098 6f4a0f36f67c5ccb9a38bf3dc313edcd 301 Gene3D G3DSA:2.40.10.340 132 185 1.3E-20 T 11-10-2018 AMC99_01098 6f4a0f36f67c5ccb9a38bf3dc313edcd 301 PIRSF PIRSF038471 19 271 3.1E-41 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AMC99_02211 a03d16b0839ac66f6df98fcf8ccfb7bd 341 SUPERFAMILY SSF53448 1 273 4.64E-69 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_02211 a03d16b0839ac66f6df98fcf8ccfb7bd 341 Gene3D G3DSA:3.90.550.10 1 340 6.0E-105 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_02211 a03d16b0839ac66f6df98fcf8ccfb7bd 341 SUPERFAMILY SSF159283 276 335 3.66E-11 T 11-10-2018 AMC99_02211 a03d16b0839ac66f6df98fcf8ccfb7bd 341 Pfam PF00483 Nucleotidyl transferase 5 278 7.2E-53 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMC99_00011 cb349c52d38b231d63034867a7760644 224 Gene3D G3DSA:1.10.260.40 122 190 3.3E-16 T 11-10-2018 AMC99_00011 cb349c52d38b231d63034867a7760644 224 SUPERFAMILY SSF141371 24 94 4.32E-6 T 11-10-2018 AMC99_00011 cb349c52d38b231d63034867a7760644 224 Pfam PF07238 PilZ domain 22 94 9.6E-9 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMC99_00011 cb349c52d38b231d63034867a7760644 224 SUPERFAMILY SSF47413 127 193 1.31E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_00011 cb349c52d38b231d63034867a7760644 224 Pfam PF13560 Helix-turn-helix domain 129 189 1.3E-12 T 11-10-2018 AMC99_00011 cb349c52d38b231d63034867a7760644 224 SMART SM00530 132 187 7.4E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_02692 778bd8aa912393556539199b440b587f 252 SUPERFAMILY SSF51735 3 246 2.21E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02692 778bd8aa912393556539199b440b587f 252 Gene3D G3DSA:3.40.50.720 1 251 1.5E-69 T 11-10-2018 AMC99_02692 778bd8aa912393556539199b440b587f 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 245 3.6E-58 T 11-10-2018 AMC99_02692 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.8E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02692 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.8E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02692 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02692 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.8E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02692 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.8E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02692 778bd8aa912393556539199b440b587f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.8E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02692 778bd8aa912393556539199b440b587f 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_02692 778bd8aa912393556539199b440b587f 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 187 0.0039 T 11-10-2018 AMC99_02692 778bd8aa912393556539199b440b587f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02692 778bd8aa912393556539199b440b587f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02692 778bd8aa912393556539199b440b587f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02068 792fad095037590b4312cf80ae6517f6 149 SMART SM00260 2 138 2.9E-5 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMC99_02068 792fad095037590b4312cf80ae6517f6 149 Gene3D G3DSA:2.40.50.180 21 137 2.0E-20 T 11-10-2018 AMC99_02068 792fad095037590b4312cf80ae6517f6 149 Pfam PF01584 CheW-like domain 5 138 6.1E-20 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 AMC99_02068 792fad095037590b4312cf80ae6517f6 149 Gene3D G3DSA:2.30.30.40 9 132 2.0E-20 T 11-10-2018 AMC99_02068 792fad095037590b4312cf80ae6517f6 149 SUPERFAMILY SSF50341 5 139 7.06E-22 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 AMC99_01522 94719d15ce741bfa9370e48cba67f690 122 SUPERFAMILY SSF46946 2 121 1.39E-45 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMC99_01522 94719d15ce741bfa9370e48cba67f690 122 Gene3D G3DSA:4.10.910.10 73 119 1.1E-24 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01522 94719d15ce741bfa9370e48cba67f690 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 4.8E-52 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01522 94719d15ce741bfa9370e48cba67f690 122 PIRSF PIRSF002134 1 122 2.8E-45 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01522 94719d15ce741bfa9370e48cba67f690 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01522 94719d15ce741bfa9370e48cba67f690 122 Gene3D G3DSA:1.10.8.50 1 72 1.9E-28 T 11-10-2018 AMC99_01522 94719d15ce741bfa9370e48cba67f690 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.783 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01522 94719d15ce741bfa9370e48cba67f690 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 2.4E-32 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01105 468d227896186e14e0dda8aa6987e477 332 Pfam PF00106 short chain dehydrogenase 40 233 3.6E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 2.2E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 180 2.2E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 192 211 2.2E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 Gene3D G3DSA:3.40.50.720 40 299 7.2E-54 T 11-10-2018 AMC99_01105 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 41 58 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 182 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 211 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 230 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 264 284 4.5E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01105 468d227896186e14e0dda8aa6987e477 332 SUPERFAMILY SSF51735 35 301 4.6E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01105 468d227896186e14e0dda8aa6987e477 332 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 179 207 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_01529 b654bf3d5805bbdf8779f734d8d1a6dd 267 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 53 246 34.576 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_01529 b654bf3d5805bbdf8779f734d8d1a6dd 267 Pfam PF03719 Ribosomal protein S5, C-terminal domain 170 240 2.8E-28 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AMC99_01529 b654bf3d5805bbdf8779f734d8d1a6dd 267 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 93 244 2.5E-62 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMC99_01529 b654bf3d5805bbdf8779f734d8d1a6dd 267 SUPERFAMILY SSF54211 162 242 1.24E-23 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_01529 b654bf3d5805bbdf8779f734d8d1a6dd 267 Gene3D G3DSA:3.30.230.10 157 250 2.5E-31 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_01529 b654bf3d5805bbdf8779f734d8d1a6dd 267 SUPERFAMILY SSF54768 90 158 4.39E-22 T 11-10-2018 AMC99_01529 b654bf3d5805bbdf8779f734d8d1a6dd 267 Pfam PF00333 Ribosomal protein S5, N-terminal domain 95 157 9.2E-27 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMC99_01529 b654bf3d5805bbdf8779f734d8d1a6dd 267 Gene3D G3DSA:3.30.160.20 84 155 1.8E-28 T 11-10-2018 AMC99_01529 b654bf3d5805bbdf8779f734d8d1a6dd 267 ProSitePatterns PS00585 Ribosomal protein S5 signature. 110 142 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMC99_00679 22e6337965493e05a137b673310fa0a1 381 Gene3D G3DSA:3.40.47.10 226 380 1.9E-38 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00679 22e6337965493e05a137b673310fa0a1 381 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 293 378 3.3E-18 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMC99_00679 22e6337965493e05a137b673310fa0a1 381 Gene3D G3DSA:3.40.47.10 9 221 4.7E-57 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00679 22e6337965493e05a137b673310fa0a1 381 SUPERFAMILY SSF53901 10 221 1.05E-47 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00679 22e6337965493e05a137b673310fa0a1 381 SUPERFAMILY SSF53901 242 379 4.4E-27 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_00679 22e6337965493e05a137b673310fa0a1 381 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 158 238 3.7E-22 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AMC99_02383 701acb75fbf6aeb4bcbd63513ebfe2e5 238 SMART SM00986 64 228 5.3E-38 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_02383 701acb75fbf6aeb4bcbd63513ebfe2e5 238 Gene3D G3DSA:3.40.470.10 4 238 1.9E-85 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_02383 701acb75fbf6aeb4bcbd63513ebfe2e5 238 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 72 81 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_02383 701acb75fbf6aeb4bcbd63513ebfe2e5 238 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 19 238 35.649 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_02383 701acb75fbf6aeb4bcbd63513ebfe2e5 238 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 20 231 2.8E-70 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_02383 701acb75fbf6aeb4bcbd63513ebfe2e5 238 Pfam PF03167 Uracil DNA glycosylase superfamily 69 227 4.5E-21 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_02383 701acb75fbf6aeb4bcbd63513ebfe2e5 238 SUPERFAMILY SSF52141 18 238 6.76E-82 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_02383 701acb75fbf6aeb4bcbd63513ebfe2e5 238 SMART SM00987 64 228 5.3E-38 T 11-10-2018 AMC99_01032 d32305a22eaf2a44abb630bc37c9b9e1 161 Gene3D G3DSA:3.40.50.360 2 157 3.1E-16 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMC99_01032 d32305a22eaf2a44abb630bc37c9b9e1 161 SUPERFAMILY SSF52218 5 154 8.64E-23 T 11-10-2018 IPR029039 Flavoprotein-like superfamily AMC99_00198 a2091513fb3a0ac7627524b415664d36 357 Pfam PF12412 Protein of unknown function (DUF3667) 80 124 1.7E-16 T 11-10-2018 IPR022134 Protein of unknown function DUF3667 AMC99_02577 abdd277b7285efe701cd1c8b99237c69 334 Gene3D G3DSA:3.60.15.10 15 198 3.7E-22 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_02577 abdd277b7285efe701cd1c8b99237c69 334 SUPERFAMILY SSF56281 9 328 5.77E-61 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_02577 abdd277b7285efe701cd1c8b99237c69 334 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 7 332 2.7E-133 T 11-10-2018 IPR026360 Putative exonuclease, DNA ligase-associated AMC99_02577 abdd277b7285efe701cd1c8b99237c69 334 Pfam PF00753 Metallo-beta-lactamase superfamily 31 171 7.2E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_01917 003458f50c4b102f8fe86cd8c7318214 330 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 23 306 37.644 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMC99_01917 003458f50c4b102f8fe86cd8c7318214 330 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 26 304 1.0E-99 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMC99_01917 003458f50c4b102f8fe86cd8c7318214 330 Gene3D G3DSA:3.40.50.11270 34 118 7.8E-110 T 11-10-2018 AMC99_01917 003458f50c4b102f8fe86cd8c7318214 330 Pfam PF02401 LytB protein 27 302 3.7E-90 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AMC99_01917 003458f50c4b102f8fe86cd8c7318214 330 Gene3D G3DSA:3.40.1010.20 119 216 7.8E-110 T 11-10-2018 AMC99_01917 003458f50c4b102f8fe86cd8c7318214 330 Gene3D G3DSA:3.40.1010.20 29 301 7.8E-110 T 11-10-2018 AMC99_01403 850596afdbe1e6e9d519c06558a1c1d3 215 Gene3D G3DSA:3.40.30.10 3 212 6.6E-34 T 11-10-2018 AMC99_01403 850596afdbe1e6e9d519c06558a1c1d3 215 Pfam PF01323 DSBA-like thioredoxin domain 6 204 1.4E-16 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMC99_01403 850596afdbe1e6e9d519c06558a1c1d3 215 SUPERFAMILY SSF52833 3 209 7.03E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01403 850596afdbe1e6e9d519c06558a1c1d3 215 PIRSF PIRSF006386 2 215 3.6E-42 T 11-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMC99_01736 638dbcb899d100b229d864d36bb8893c 284 Pfam PF00892 EamA-like transporter family 1 128 2.8E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_01736 638dbcb899d100b229d864d36bb8893c 284 Pfam PF00892 EamA-like transporter family 138 267 5.6E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_01736 638dbcb899d100b229d864d36bb8893c 284 SUPERFAMILY SSF103481 30 132 1.29E-14 T 11-10-2018 AMC99_01736 638dbcb899d100b229d864d36bb8893c 284 SUPERFAMILY SSF103481 172 271 1.31E-12 T 11-10-2018 AMC99_01160 b6679a1514c3ee4b87721096979e9ebf 444 SMART SM00671 356 391 4.2E-4 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_01160 b6679a1514c3ee4b87721096979e9ebf 444 SMART SM00671 99 134 360.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_01160 b6679a1514c3ee4b87721096979e9ebf 444 SMART SM00671 320 355 37.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_01160 b6679a1514c3ee4b87721096979e9ebf 444 SMART SM00671 392 427 150.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_01160 b6679a1514c3ee4b87721096979e9ebf 444 SUPERFAMILY SSF81901 257 435 1.66E-21 T 11-10-2018 AMC99_01160 b6679a1514c3ee4b87721096979e9ebf 444 Gene3D G3DSA:1.25.40.10 246 439 2.1E-30 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01160 b6679a1514c3ee4b87721096979e9ebf 444 Gene3D G3DSA:1.25.40.10 49 245 1.4E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01550 7423b673f7cd24a9664f2fcad0298755 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.7E-68 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMC99_01550 7423b673f7cd24a9664f2fcad0298755 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.1E-67 T 11-10-2018 IPR023798 Ribosomal protein S7 domain AMC99_01550 7423b673f7cd24a9664f2fcad0298755 156 PIRSF PIRSF002122 3 156 8.4E-61 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMC99_01550 7423b673f7cd24a9664f2fcad0298755 156 SUPERFAMILY SSF47973 1 149 9.94E-62 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AMC99_01550 7423b673f7cd24a9664f2fcad0298755 156 Gene3D G3DSA:1.10.455.10 2 156 1.3E-61 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AMC99_01550 7423b673f7cd24a9664f2fcad0298755 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01550 7423b673f7cd24a9664f2fcad0298755 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.272 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMC99_02333 4065965dda9186593f26c4a2e66d06b9 774 Gene3D G3DSA:3.40.50.300 380 687 3.6E-109 T 11-10-2018 AMC99_02333 4065965dda9186593f26c4a2e66d06b9 774 SUPERFAMILY SSF46785 705 770 9.52E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02333 4065965dda9186593f26c4a2e66d06b9 774 Gene3D G3DSA:1.10.10.10 702 766 1.7E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02333 4065965dda9186593f26c4a2e66d06b9 774 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 27 184 2.1E-20 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region AMC99_02333 4065965dda9186593f26c4a2e66d06b9 774 SUPERFAMILY SSF52540 362 674 1.72E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02333 4065965dda9186593f26c4a2e66d06b9 774 Pfam PF01580 FtsK/SpoIIIE family 387 602 1.8E-58 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMC99_02333 4065965dda9186593f26c4a2e66d06b9 774 Pfam PF09397 Ftsk gamma domain 708 766 3.8E-20 T 11-10-2018 IPR018541 FtsK gamma domain AMC99_02333 4065965dda9186593f26c4a2e66d06b9 774 SMART SM00843 705 770 3.7E-27 T 11-10-2018 IPR018541 FtsK gamma domain AMC99_02333 4065965dda9186593f26c4a2e66d06b9 774 Gene3D G3DSA:3.30.980.40 275 379 5.5E-30 T 11-10-2018 AMC99_02144 d1d9f6543704f4942a9697b4bd0bd752 205 SUPERFAMILY SSF63380 96 201 1.28E-28 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMC99_02144 d1d9f6543704f4942a9697b4bd0bd752 205 PIRSF PIRSF000498 1 204 2.6E-62 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_02144 d1d9f6543704f4942a9697b4bd0bd752 205 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 2 200 1.1E-49 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_02144 d1d9f6543704f4942a9697b4bd0bd752 205 Pfam PF00677 Lumazine binding domain 102 191 1.1E-22 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_02144 d1d9f6543704f4942a9697b4bd0bd752 205 Pfam PF00677 Lumazine binding domain 3 87 3.9E-18 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_02144 d1d9f6543704f4942a9697b4bd0bd752 205 SUPERFAMILY SSF63380 2 95 4.85E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AMC99_02144 d1d9f6543704f4942a9697b4bd0bd752 205 Gene3D G3DSA:2.40.30.20 1 90 8.1E-21 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_02144 d1d9f6543704f4942a9697b4bd0bd752 205 Gene3D G3DSA:2.40.30.20 104 204 7.1E-31 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AMC99_02778 3063ec2da013b9c673c4348b75c2c1bc 536 Pfam PF00795 Carbon-nitrogen hydrolase 264 480 3.3E-14 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMC99_02778 3063ec2da013b9c673c4348b75c2c1bc 536 Gene3D G3DSA:3.60.110.10 246 489 2.1E-11 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_02778 3063ec2da013b9c673c4348b75c2c1bc 536 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 67 478 2.2E-71 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AMC99_02778 3063ec2da013b9c673c4348b75c2c1bc 536 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 13 516 17.231 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 AMC99_02778 3063ec2da013b9c673c4348b75c2c1bc 536 SUPERFAMILY SSF56317 230 504 8.5E-33 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_02449 8e25b304e9cf4b44af0734b07c8f7e68 341 Gene3D G3DSA:3.40.50.10330 36 152 2.4E-12 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMC99_02449 8e25b304e9cf4b44af0734b07c8f7e68 341 SUPERFAMILY SSF111331 33 335 7.85E-27 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMC99_02449 8e25b304e9cf4b44af0734b07c8f7e68 341 Pfam PF00781 Diacylglycerol kinase catalytic domain 34 141 5.2E-11 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMC99_02449 8e25b304e9cf4b44af0734b07c8f7e68 341 Gene3D G3DSA:2.60.200.40 153 194 2.4E-12 T 11-10-2018 AMC99_02586 0cfb29367758b3b7d1377765bce40d35 371 Pfam PF01551 Peptidase family M23 254 348 2.6E-36 T 11-10-2018 IPR016047 Peptidase M23 AMC99_02586 0cfb29367758b3b7d1377765bce40d35 371 Gene3D G3DSA:2.70.70.10 212 355 7.4E-52 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_02586 0cfb29367758b3b7d1377765bce40d35 371 SUPERFAMILY SSF51261 230 352 2.62E-57 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_02331 a0936bf1cfdadf8bb1ac31ba19f59c67 220 SUPERFAMILY SSF51419 6 217 3.93E-68 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_02331 a0936bf1cfdadf8bb1ac31ba19f59c67 220 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 218 24.722 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMC99_02331 a0936bf1cfdadf8bb1ac31ba19f59c67 220 Gene3D G3DSA:3.20.20.10 1 220 6.6E-74 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_02331 a0936bf1cfdadf8bb1ac31ba19f59c67 220 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.4E-21 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 AMC99_02331 a0936bf1cfdadf8bb1ac31ba19f59c67 220 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 219 1.8E-45 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMC99_02331 a0936bf1cfdadf8bb1ac31ba19f59c67 220 PIRSF PIRSF004848 1 220 5.5E-60 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 1.3E-38 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 Gene3D G3DSA:3.40.50.720 232 436 1.4E-76 T 11-10-2018 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 PIRSF PIRSF500134 1 436 1.7E-183 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 SUPERFAMILY SSF52413 313 430 9.42E-38 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 Gene3D G3DSA:3.40.50.720 1 199 1.5E-81 T 11-10-2018 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 PIRSF PIRSF000124 1 435 8.8E-146 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 Gene3D G3DSA:1.20.5.100 200 231 2.1E-19 T 11-10-2018 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 SUPERFAMILY SSF51735 1 189 3.09E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 319 420 9.0E-32 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 SUPERFAMILY SSF48179 201 294 2.21E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 416 9.6E-141 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 1.2E-64 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_01986 2141e3d8bfcd30e8bc50f13ace390c76 436 SMART SM00984 319 420 4.8E-49 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_01164 646e79f62a6822d22b10a8090a129cd9 144 Gene3D G3DSA:3.90.1010.10 2 138 7.3E-13 T 11-10-2018 AMC99_01164 646e79f62a6822d22b10a8090a129cd9 144 SUPERFAMILY SSF82649 6 138 2.07E-24 T 11-10-2018 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 Pfam PF13365 Trypsin-like peptidase domain 107 248 1.6E-36 T 11-10-2018 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 Gene3D G3DSA:2.30.42.10 410 507 2.1E-18 T 11-10-2018 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 Gene3D G3DSA:2.30.42.10 285 391 8.6E-28 T 11-10-2018 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 Gene3D G3DSA:2.40.10.120 52 280 2.1E-80 T 11-10-2018 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 Pfam PF13180 PDZ domain 287 377 8.6E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 Pfam PF13180 PDZ domain 414 498 7.3E-10 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 SUPERFAMILY SSF50156 412 499 3.42E-14 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 SUPERFAMILY SSF50494 52 281 9.94E-64 T 11-10-2018 IPR009003 Peptidase S1, PA clan AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 53 499 1.4E-142 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 SUPERFAMILY SSF50156 245 369 2.89E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 7.3E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 PRINTS PR00834 HtrA/DegQ protease family signature 143 163 7.3E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 7.3E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 PRINTS PR00834 HtrA/DegQ protease family signature 327 339 7.3E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 PRINTS PR00834 HtrA/DegQ protease family signature 184 208 7.3E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 7.3E-55 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 SMART SM00228 287 369 4.2E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMC99_02240 4aa9d464d6aae193dce91e7814e2331e 508 SMART SM00228 412 497 1.4E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AMC99_01523 5733fdaac27073bc69bb989beeee2a2a 231 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 35 180 2.8E-7 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase AMC99_01523 5733fdaac27073bc69bb989beeee2a2a 231 Gene3D G3DSA:3.30.530.20 31 182 2.2E-7 T 11-10-2018 IPR023393 START-like domain superfamily AMC99_01523 5733fdaac27073bc69bb989beeee2a2a 231 SUPERFAMILY SSF55961 34 182 1.07E-11 T 11-10-2018 AMC99_01994 0f07fc3ee92e4c748d9d8d5dc9f48449 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 33 305 3.4E-71 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_01994 0f07fc3ee92e4c748d9d8d5dc9f48449 313 SUPERFAMILY SSF161111 33 223 2.22E-49 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMC99_01994 0f07fc3ee92e4c748d9d8d5dc9f48449 313 SUPERFAMILY SSF160240 235 303 1.15E-7 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AMC99_01994 0f07fc3ee92e4c748d9d8d5dc9f48449 313 Pfam PF01545 Cation efflux family 37 223 1.1E-37 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_01994 0f07fc3ee92e4c748d9d8d5dc9f48449 313 Gene3D G3DSA:1.20.1510.10 31 224 1.7E-35 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMC99_02492 a43543daf0d0d427a3401db43a10da77 167 Gene3D G3DSA:3.30.300.130 68 166 1.8E-37 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMC99_02492 a43543daf0d0d427a3401db43a10da77 167 Pfam PF01883 Iron-sulfur cluster assembly protein 72 144 3.8E-22 T 11-10-2018 IPR002744 MIP18 family-like AMC99_02492 a43543daf0d0d427a3401db43a10da77 167 SUPERFAMILY SSF117916 72 166 1.24E-31 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AMC99_02492 a43543daf0d0d427a3401db43a10da77 167 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 70 167 8.7E-45 T 11-10-2018 IPR014291 SUF system FeS cluster assembly associated AMC99_01931 1a0e851767dddb6a6207fcab700d6483 291 Gene3D G3DSA:3.90.226.10 1 211 1.1E-64 T 11-10-2018 AMC99_01931 1a0e851767dddb6a6207fcab700d6483 291 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 272 8.1E-59 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_01931 1a0e851767dddb6a6207fcab700d6483 291 Gene3D G3DSA:1.10.12.10 216 272 1.6E-7 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMC99_01931 1a0e851767dddb6a6207fcab700d6483 291 SUPERFAMILY SSF52096 3 272 2.4E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 Gene3D G3DSA:1.10.10.10 171 242 2.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 193 1.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 221 1.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 209 1.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 Gene3D G3DSA:3.30.450.80 8 170 4.5E-14 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 230 1.6E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 SUPERFAMILY SSF46894 171 239 2.35E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 Pfam PF03472 Autoinducer binding domain 22 143 1.5E-15 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 ProSitePatterns PS00622 LuxR-type HTH domain signature. 193 220 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 SMART SM00421 176 233 7.3E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00525 fa670bdfaf618249f3890abb16509b23 244 SUPERFAMILY SSF75516 15 170 9.81E-22 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily AMC99_02055 8b91a952ce311a53cb79f530a888b1a9 309 SUPERFAMILY SSF103481 40 142 1.96E-8 T 11-10-2018 AMC99_02055 8b91a952ce311a53cb79f530a888b1a9 309 Pfam PF00892 EamA-like transporter family 8 138 1.3E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_02055 8b91a952ce311a53cb79f530a888b1a9 309 Pfam PF00892 EamA-like transporter family 151 280 1.4E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_02055 8b91a952ce311a53cb79f530a888b1a9 309 SUPERFAMILY SSF103481 185 283 3.2E-10 T 11-10-2018 AMC99_01021 94b549facea74369e6e0ab85b696e8ef 230 SUPERFAMILY SSF46894 128 227 8.34E-30 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_01021 94b549facea74369e6e0ab85b696e8ef 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 5.0E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_01021 94b549facea74369e6e0ab85b696e8ef 230 SMART SM00448 4 117 1.3E-46 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01021 94b549facea74369e6e0ab85b696e8ef 230 SUPERFAMILY SSF52172 3 127 9.11E-43 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01021 94b549facea74369e6e0ab85b696e8ef 230 SMART SM00862 151 226 3.1E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_01021 94b549facea74369e6e0ab85b696e8ef 230 Pfam PF00072 Response regulator receiver domain 7 117 8.5E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01021 94b549facea74369e6e0ab85b696e8ef 230 Gene3D G3DSA:3.40.50.2300 1 127 6.9E-40 T 11-10-2018 AMC99_01021 94b549facea74369e6e0ab85b696e8ef 230 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 226 6.3E-103 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 AMC99_01021 94b549facea74369e6e0ab85b696e8ef 230 Gene3D G3DSA:1.10.10.10 128 228 1.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02225 d3489bd790c1e4035ea6e685fdafea95 167 Gene3D G3DSA:3.30.70.560 7 165 8.6E-38 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMC99_02225 d3489bd790c1e4035ea6e685fdafea95 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 11 140 6.5E-28 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMC99_02225 d3489bd790c1e4035ea6e685fdafea95 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 26 140 6.8E-25 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMC99_02225 d3489bd790c1e4035ea6e685fdafea95 167 SUPERFAMILY SSF55083 9 161 1.44E-37 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AMC99_01210 67921b42eb555122b1eefdde3cc2dc0e 361 SUPERFAMILY SSF52518 30 359 1.2E-102 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01210 67921b42eb555122b1eefdde3cc2dc0e 361 Pfam PF00676 Dehydrogenase E1 component 52 349 4.6E-104 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AMC99_01210 67921b42eb555122b1eefdde3cc2dc0e 361 Gene3D G3DSA:3.40.50.970 6 361 5.0E-130 T 11-10-2018 AMC99_01210 67921b42eb555122b1eefdde3cc2dc0e 361 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 44 357 1.7E-149 T 11-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 AMC99_00820 4bfb17b6169942d44be11621b2952875 674 Pfam PF13899 Thioredoxin-like 572 652 3.0E-12 T 11-10-2018 AMC99_00820 4bfb17b6169942d44be11621b2952875 674 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 291 459 2.9E-8 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMC99_00820 4bfb17b6169942d44be11621b2952875 674 Gene3D G3DSA:3.40.30.10 554 673 4.2E-10 T 11-10-2018 AMC99_00820 4bfb17b6169942d44be11621b2952875 674 Pfam PF11412 Disulphide bond corrector protein DsbC 37 146 3.0E-17 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMC99_00820 4bfb17b6169942d44be11621b2952875 674 SUPERFAMILY SSF52833 570 670 1.61E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02750 add278c70c7419eaf4664c247ea698c7 409 Pfam PF00266 Aminotransferase class-V 77 342 1.7E-20 T 11-10-2018 IPR000192 Aminotransferase class V domain AMC99_02750 add278c70c7419eaf4664c247ea698c7 409 Hamap MF_01970 Kynureninase [kynU]. 1 392 33.781 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AMC99_02750 add278c70c7419eaf4664c247ea698c7 409 TIGRFAM TIGR01814 kynureninase: kynureninase 10 391 6.2E-85 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AMC99_02750 add278c70c7419eaf4664c247ea698c7 409 SUPERFAMILY SSF53383 6 392 4.03E-83 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_02750 add278c70c7419eaf4664c247ea698c7 409 Gene3D G3DSA:3.90.1150.10 12 391 3.7E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_02750 add278c70c7419eaf4664c247ea698c7 409 PIRSF PIRSF038800 1 400 6.5E-136 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 AMC99_02750 add278c70c7419eaf4664c247ea698c7 409 Gene3D G3DSA:3.40.640.10 43 298 3.7E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_00466 43f1f00ccdd545a073202e1ad5febd1e 345 Gene3D G3DSA:3.30.200.20 9 110 5.1E-34 T 11-10-2018 AMC99_00466 43f1f00ccdd545a073202e1ad5febd1e 345 Pfam PF01636 Phosphotransferase enzyme family 32 254 6.1E-57 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMC99_00466 43f1f00ccdd545a073202e1ad5febd1e 345 SUPERFAMILY SSF56112 8 339 5.25E-66 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMC99_00466 43f1f00ccdd545a073202e1ad5febd1e 345 Gene3D G3DSA:3.90.1200.10 111 345 8.1E-86 T 11-10-2018 AMC99_00153 2986c499046c6ee9852b925cd0373bd4 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 125 3.1E-26 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_00153 2986c499046c6ee9852b925cd0373bd4 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 225 9.8E-22 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00153 2986c499046c6ee9852b925cd0373bd4 384 Gene3D G3DSA:1.10.540.10 9 126 8.0E-31 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00153 2986c499046c6ee9852b925cd0373bd4 384 Gene3D G3DSA:2.40.110.10 128 241 4.5E-34 T 11-10-2018 AMC99_00153 2986c499046c6ee9852b925cd0373bd4 384 Gene3D G3DSA:1.20.140.10 242 384 1.4E-11 T 11-10-2018 AMC99_00153 2986c499046c6ee9852b925cd0373bd4 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 381 1.9E-4 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00153 2986c499046c6ee9852b925cd0373bd4 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 AMC99_00153 2986c499046c6ee9852b925cd0373bd4 384 SUPERFAMILY SSF47203 238 381 5.93E-6 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00153 2986c499046c6ee9852b925cd0373bd4 384 SUPERFAMILY SSF56645 12 250 1.44E-66 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_02764 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.5E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02764 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.5E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02764 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.5E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02764 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02764 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 Gene3D G3DSA:3.40.50.720 1 222 8.5E-51 T 11-10-2018 AMC99_02764 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 Pfam PF00106 short chain dehydrogenase 4 185 2.9E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02764 ff2a8b75d14e88f6bc7fce4c18ce0de6 222 SUPERFAMILY SSF51735 4 222 2.09E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02552 acb6b82df29c184f0fb7e2df5365ba75 214 Gene3D G3DSA:3.40.50.150 12 211 5.4E-48 T 11-10-2018 AMC99_02552 acb6b82df29c184f0fb7e2df5365ba75 214 SUPERFAMILY SSF53335 17 183 1.82E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02552 acb6b82df29c184f0fb7e2df5365ba75 214 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 187 22.604 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMC99_02552 acb6b82df29c184f0fb7e2df5365ba75 214 Pfam PF02527 rRNA small subunit methyltransferase G 22 183 1.1E-34 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMC99_02552 acb6b82df29c184f0fb7e2df5365ba75 214 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 28 183 7.1E-35 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMC99_02602 2c1d141cb15cb99de8042ef202eabf3a 182 SUPERFAMILY SSF51182 1 180 1.96E-74 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMC99_02602 2c1d141cb15cb99de8042ef202eabf3a 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 176 1.5E-63 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMC99_02602 2c1d141cb15cb99de8042ef202eabf3a 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 6.0E-55 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMC99_02602 2c1d141cb15cb99de8042ef202eabf3a 182 Gene3D G3DSA:2.60.120.10 1 181 1.1E-70 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_02602 2c1d141cb15cb99de8042ef202eabf3a 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 6.5E-69 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMC99_01002 75a4b0189e3f9f6b9f4e115c97cf2db9 464 SUPERFAMILY SSF47413 7 68 4.02E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_01002 75a4b0189e3f9f6b9f4e115c97cf2db9 464 Gene3D G3DSA:1.10.260.40 7 71 9.2E-11 T 11-10-2018 AMC99_01002 75a4b0189e3f9f6b9f4e115c97cf2db9 464 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 298 455 1.3E-40 T 11-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator AMC99_01002 75a4b0189e3f9f6b9f4e115c97cf2db9 464 PIRSF PIRSF019251 1 459 8.0E-122 T 11-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 AMC99_01002 75a4b0189e3f9f6b9f4e115c97cf2db9 464 Pfam PF06114 IrrE N-terminal-like domain 174 297 2.0E-15 T 11-10-2018 IPR010359 IrrE N-terminal-like domain AMC99_01002 75a4b0189e3f9f6b9f4e115c97cf2db9 464 SMART SM00530 11 66 4.4E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_01002 75a4b0189e3f9f6b9f4e115c97cf2db9 464 Pfam PF13560 Helix-turn-helix domain 9 64 4.6E-11 T 11-10-2018 AMC99_00925 6cdc13c5dbb501d234711f7ccb88e2c3 284 Gene3D G3DSA:3.40.50.1820 40 283 1.8E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00925 6cdc13c5dbb501d234711f7ccb88e2c3 284 SUPERFAMILY SSF53474 28 265 1.39E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00925 6cdc13c5dbb501d234711f7ccb88e2c3 284 Pfam PF00756 Putative esterase 45 210 2.0E-17 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMC99_02011 b06638a0e88b6790840d5e0a99c0799c 348 Gene3D G3DSA:3.30.70.1070 274 348 1.2E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMC99_02011 b06638a0e88b6790840d5e0a99c0799c 348 Gene3D G3DSA:1.25.40.10 5 194 4.1E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02011 b06638a0e88b6790840d5e0a99c0799c 348 SUPERFAMILY SSF110997 272 346 1.22E-10 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 AMC99_02011 b06638a0e88b6790840d5e0a99c0799c 348 Pfam PF08238 Sel1 repeat 125 155 27.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_02011 b06638a0e88b6790840d5e0a99c0799c 348 Pfam PF08238 Sel1 repeat 57 92 6.0E-8 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_02011 b06638a0e88b6790840d5e0a99c0799c 348 SUPERFAMILY SSF81901 32 182 8.24E-23 T 11-10-2018 AMC99_02011 b06638a0e88b6790840d5e0a99c0799c 348 SMART SM00671 125 160 10.0 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_02011 b06638a0e88b6790840d5e0a99c0799c 348 SMART SM00671 57 92 2.0E-9 T 11-10-2018 IPR006597 Sel1-like repeat AMC99_02011 b06638a0e88b6790840d5e0a99c0799c 348 Pfam PF05036 Sporulation related domain 273 346 8.4E-14 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMC99_01012 7ad0964bd8379938f43b6de6110077c5 160 Gene3D G3DSA:2.30.110.10 5 145 1.5E-30 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AMC99_01012 7ad0964bd8379938f43b6de6110077c5 160 SUPERFAMILY SSF50475 10 132 5.78E-19 T 11-10-2018 AMC99_01012 7ad0964bd8379938f43b6de6110077c5 160 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 13 144 3.0E-26 T 11-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain AMC99_00701 757b78933f0674faabae8e500054b762 240 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 222 5.6E-63 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00701 757b78933f0674faabae8e500054b762 240 Pfam PF01578 Cytochrome C assembly protein 26 180 1.2E-22 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AMC99_00701 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 58 78 2.7E-46 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00701 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 152 178 2.7E-46 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00701 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 96 116 2.7E-46 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00701 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 41 58 2.7E-46 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00701 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 117 137 2.7E-46 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_00701 757b78933f0674faabae8e500054b762 240 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 199 223 2.7E-46 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AMC99_02724 41bbde4f146c54e36161ff34c9a5ac0c 371 Pfam PF00691 OmpA family 264 359 1.1E-16 T 11-10-2018 IPR006665 OmpA-like domain AMC99_02724 41bbde4f146c54e36161ff34c9a5ac0c 371 Gene3D G3DSA:2.40.160.20 15 223 6.1E-28 T 11-10-2018 AMC99_02724 41bbde4f146c54e36161ff34c9a5ac0c 371 PRINTS PR01021 OMPA domain signature 310 326 1.3E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_02724 41bbde4f146c54e36161ff34c9a5ac0c 371 PRINTS PR01021 OMPA domain signature 295 310 1.3E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_02724 41bbde4f146c54e36161ff34c9a5ac0c 371 PRINTS PR01021 OMPA domain signature 265 287 1.3E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_02724 41bbde4f146c54e36161ff34c9a5ac0c 371 Gene3D G3DSA:3.30.1330.60 257 365 1.2E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_02724 41bbde4f146c54e36161ff34c9a5ac0c 371 SUPERFAMILY SSF56925 16 223 9.94E-26 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMC99_02724 41bbde4f146c54e36161ff34c9a5ac0c 371 SUPERFAMILY SSF103088 236 364 2.88E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_00770 6f9450e576704695c26f1262de26ad52 612 TIGRFAM TIGR00815 sulP: sulfate permease 30 572 9.5E-133 T 11-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 AMC99_00770 6f9450e576704695c26f1262de26ad52 612 Pfam PF00916 Sulfate permease family 43 426 1.5E-100 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMC99_00770 6f9450e576704695c26f1262de26ad52 612 Pfam PF01740 STAS domain 482 584 3.8E-12 T 11-10-2018 IPR002645 STAS domain AMC99_00770 6f9450e576704695c26f1262de26ad52 612 SUPERFAMILY SSF52091 477 587 3.14E-15 T 11-10-2018 IPR036513 STAS domain superfamily AMC99_00770 6f9450e576704695c26f1262de26ad52 612 Gene3D G3DSA:3.30.750.24 456 589 2.4E-24 T 11-10-2018 IPR036513 STAS domain superfamily AMC99_02156 d98bb5a0466fc089c0d42ba9c8e72b74 523 Pfam PF07690 Major Facilitator Superfamily 33 426 1.4E-44 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_02156 d98bb5a0466fc089c0d42ba9c8e72b74 523 SUPERFAMILY SSF103473 24 519 8.89E-62 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_02156 d98bb5a0466fc089c0d42ba9c8e72b74 523 Gene3D G3DSA:1.20.1720.10 29 234 7.5E-40 T 11-10-2018 AMC99_02156 d98bb5a0466fc089c0d42ba9c8e72b74 523 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 32 511 2.0E-111 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMC99_00006 cd19d2c3de32241695096974226da541 352 SUPERFAMILY SSF51695 24 334 5.49E-68 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMC99_00006 cd19d2c3de32241695096974226da541 352 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 30 335 1.7E-48 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMC99_00006 cd19d2c3de32241695096974226da541 352 Gene3D G3DSA:3.20.20.190 23 340 2.8E-95 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMC99_02131 cfc70d05fc83c720bb2a4caaebfbd991 171 Pfam PF03981 Ubiquinol-cytochrome C chaperone 37 168 2.0E-18 T 11-10-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 AMC99_01260 ee3e76e478799048b4bebf84fdeac3d4 196 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 38 189 39.523 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01260 ee3e76e478799048b4bebf84fdeac3d4 196 Gene3D G3DSA:3.40.50.12280 33 196 3.3E-77 T 11-10-2018 AMC99_01260 ee3e76e478799048b4bebf84fdeac3d4 196 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 75 184 4.8E-23 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01260 ee3e76e478799048b4bebf84fdeac3d4 196 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 156 172 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01260 ee3e76e478799048b4bebf84fdeac3d4 196 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 49 190 1.9E-73 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01260 ee3e76e478799048b4bebf84fdeac3d4 196 SUPERFAMILY SSF56770 47 191 1.09E-65 T 11-10-2018 AMC99_01202 dc3a410b073a4dec9bc2c93c7e63fff2 218 Pfam PF07947 YhhN family 38 205 1.4E-19 T 11-10-2018 IPR012506 YhhN-like GO:0016021 AMC99_00664 0731ce7260c4c2df57d049f6e5876077 439 SUPERFAMILY SSF48403 234 321 9.33E-8 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMC99_00664 0731ce7260c4c2df57d049f6e5876077 439 Gene3D G3DSA:1.25.40.20 232 361 9.5E-10 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AMC99_00057 d4ec24727b7350a9341f127d2430ef12 144 SUPERFAMILY SSF101936 4 129 3.14E-39 T 11-10-2018 IPR015300 DNA-binding pseudobarrel domain superfamily AMC99_00057 d4ec24727b7350a9341f127d2430ef12 144 Gene3D G3DSA:2.40.330.10 1 123 6.1E-31 T 11-10-2018 IPR015300 DNA-binding pseudobarrel domain superfamily AMC99_00057 d4ec24727b7350a9341f127d2430ef12 144 Pfam PF09217 Restriction endonuclease EcoRII, N-terminal 4 97 1.2E-17 T 11-10-2018 IPR023372 Restriction endonuclease, type II, EcoRII, N-terminal AMC99_00861 02eb76aeeda3707f4c79d9a0ab49365f 342 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 331 3.7E-116 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AMC99_00861 02eb76aeeda3707f4c79d9a0ab49365f 342 Gene3D G3DSA:3.40.718.10 6 334 6.0E-116 T 11-10-2018 AMC99_00861 02eb76aeeda3707f4c79d9a0ab49365f 342 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 7 335 34.725 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 AMC99_00861 02eb76aeeda3707f4c79d9a0ab49365f 342 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 42 328 3.0E-96 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 AMC99_00861 02eb76aeeda3707f4c79d9a0ab49365f 342 SUPERFAMILY SSF53659 9 335 1.28E-98 T 11-10-2018 AMC99_01170 e0935feb9a378388408baaf02e70ceb4 148 Gene3D G3DSA:3.40.50.620 1 139 5.7E-9 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01170 e0935feb9a378388408baaf02e70ceb4 148 SUPERFAMILY SSF52402 2 138 8.12E-8 T 11-10-2018 AMC99_01170 e0935feb9a378388408baaf02e70ceb4 148 Pfam PF00582 Universal stress protein family 1 137 1.6E-9 T 11-10-2018 IPR006016 UspA AMC99_01939 fe8f2fe2545f4e10036380397110de03 484 SUPERFAMILY SSF48452 4 207 1.0E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01939 fe8f2fe2545f4e10036380397110de03 484 Pfam PF13469 Sulfotransferase family 249 436 8.2E-28 T 11-10-2018 AMC99_01939 fe8f2fe2545f4e10036380397110de03 484 SMART SM00028 178 211 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_01939 fe8f2fe2545f4e10036380397110de03 484 SMART SM00028 106 139 5.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_01939 fe8f2fe2545f4e10036380397110de03 484 Gene3D G3DSA:3.40.50.300 236 481 1.2E-44 T 11-10-2018 AMC99_01939 fe8f2fe2545f4e10036380397110de03 484 SUPERFAMILY SSF52540 244 466 1.67E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01939 fe8f2fe2545f4e10036380397110de03 484 Pfam PF13181 Tetratricopeptide repeat 108 138 0.093 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_01461 57da33c134ce3cf4dabdc20290ac40ee 555 Gene3D G3DSA:3.40.630.30 16 239 3.9E-49 T 11-10-2018 AMC99_01461 57da33c134ce3cf4dabdc20290ac40ee 555 Pfam PF00583 Acetyltransferase (GNAT) family 60 153 3.4E-6 T 11-10-2018 IPR000182 GNAT domain AMC99_01461 57da33c134ce3cf4dabdc20290ac40ee 555 Gene3D G3DSA:3.60.110.10 243 532 4.2E-54 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_01461 57da33c134ce3cf4dabdc20290ac40ee 555 SUPERFAMILY SSF56317 244 515 1.96E-55 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_01461 57da33c134ce3cf4dabdc20290ac40ee 555 SUPERFAMILY SSF55729 24 164 8.75E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01461 57da33c134ce3cf4dabdc20290ac40ee 555 Pfam PF00795 Carbon-nitrogen hydrolase 247 506 3.5E-31 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMC99_00225 0835cb548723f77cd3e591f2f575975c 293 Pfam PF02265 S1/P1 Nuclease 24 281 3.4E-51 T 11-10-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 AMC99_00225 0835cb548723f77cd3e591f2f575975c 293 Gene3D G3DSA:1.10.575.10 24 283 1.6E-54 T 11-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 AMC99_00225 0835cb548723f77cd3e591f2f575975c 293 SUPERFAMILY SSF48537 24 278 4.58E-49 T 11-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 AMC99_01782 769bfd1355ad0b7cdb96ea3cf0e68925 92 Gene3D G3DSA:3.30.1340.10 2 87 7.2E-24 T 11-10-2018 IPR035895 HPr-like superfamily AMC99_01782 769bfd1355ad0b7cdb96ea3cf0e68925 92 Pfam PF00381 PTS HPr component phosphorylation site 5 86 1.0E-22 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMC99_01782 769bfd1355ad0b7cdb96ea3cf0e68925 92 PRINTS PR00107 Phosphocarrier protein signature 42 57 1.9E-8 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMC99_01782 769bfd1355ad0b7cdb96ea3cf0e68925 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 1.9E-8 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMC99_01782 769bfd1355ad0b7cdb96ea3cf0e68925 92 PRINTS PR00107 Phosphocarrier protein signature 57 74 1.9E-8 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMC99_01782 769bfd1355ad0b7cdb96ea3cf0e68925 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 5 85 1.1E-21 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like AMC99_01782 769bfd1355ad0b7cdb96ea3cf0e68925 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMC99_01782 769bfd1355ad0b7cdb96ea3cf0e68925 92 SUPERFAMILY SSF55594 5 92 3.01E-22 T 11-10-2018 IPR035895 HPr-like superfamily AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 SUPERFAMILY SSF51735 6 239 2.44E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 Gene3D G3DSA:3.40.50.720 1 267 6.1E-59 T 11-10-2018 AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 213 0.0068 T 11-10-2018 AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 Pfam PF00106 short chain dehydrogenase 11 196 4.8E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 8.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 8.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00539 53c0f250fb302262c557b6988fc175f0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00385 P450 superfamily signature 269 286 1.6E-7 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00385 P450 superfamily signature 304 315 1.6E-7 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00385 P450 superfamily signature 370 379 1.6E-7 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00385 P450 superfamily signature 379 390 1.6E-7 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 223 245 1.1E-45 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 370 379 1.1E-45 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 171 186 1.1E-45 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 349 364 1.1E-45 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 107 118 1.1E-45 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 321 348 1.1E-45 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 304 315 1.1E-45 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 154 170 1.1E-45 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 PRINTS PR00359 B-class P450 signature 379 390 1.1E-45 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 Pfam PF00067 Cytochrome P450 207 403 1.2E-26 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 Gene3D G3DSA:1.10.630.10 6 430 4.2E-135 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 372 381 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMC99_02398 b48c0bbcb0c97f8f98c35ef372711419 430 SUPERFAMILY SSF48264 23 428 8.77E-93 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_01482 087e8be20cd2ef906e7e2501db77d1fb 222 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 6 29 2.1E-7 T 11-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 AMC99_01482 087e8be20cd2ef906e7e2501db77d1fb 222 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 181 203 2.1E-7 T 11-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 AMC99_01482 087e8be20cd2ef906e7e2501db77d1fb 222 Gene3D G3DSA:1.20.950.20 1 209 1.3E-18 T 11-10-2018 AMC99_01482 087e8be20cd2ef906e7e2501db77d1fb 222 Pfam PF01292 Prokaryotic cytochrome b561 3 217 1.0E-41 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AMC99_01482 087e8be20cd2ef906e7e2501db77d1fb 222 SUPERFAMILY SSF81342 2 220 3.92E-28 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AMC99_01414 28d78329e164fcff40fb6e8a86bb7bc7 167 Gene3D G3DSA:2.40.30.60 6 87 8.6E-13 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AMC99_01414 28d78329e164fcff40fb6e8a86bb7bc7 167 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 6 156 1.8E-32 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMC99_01414 28d78329e164fcff40fb6e8a86bb7bc7 167 Gene3D G3DSA:2.30.30.240 88 167 3.0E-12 T 11-10-2018 AMC99_01414 28d78329e164fcff40fb6e8a86bb7bc7 167 Pfam PF01782 RimM N-terminal domain 8 83 1.5E-13 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 AMC99_01414 28d78329e164fcff40fb6e8a86bb7bc7 167 Pfam PF05239 PRC-barrel domain 90 150 3.0E-5 T 11-10-2018 IPR027275 PRC-barrel domain AMC99_01414 28d78329e164fcff40fb6e8a86bb7bc7 167 SUPERFAMILY SSF50346 93 164 4.32E-12 T 11-10-2018 IPR011033 PRC-barrel-like superfamily AMC99_01414 28d78329e164fcff40fb6e8a86bb7bc7 167 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 166 17.068 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMC99_01414 28d78329e164fcff40fb6e8a86bb7bc7 167 SUPERFAMILY SSF50447 6 87 1.27E-10 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AMC99_01886 52117d8470baa5a6815917ae24fc9e7b 276 Gene3D G3DSA:3.90.230.10 1 271 2.1E-104 T 11-10-2018 AMC99_01886 52117d8470baa5a6815917ae24fc9e7b 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 84 97 9.8E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMC99_01886 52117d8470baa5a6815917ae24fc9e7b 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 177 189 9.8E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMC99_01886 52117d8470baa5a6815917ae24fc9e7b 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 208 220 9.8E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMC99_01886 52117d8470baa5a6815917ae24fc9e7b 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 106 122 9.8E-22 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMC99_01886 52117d8470baa5a6815917ae24fc9e7b 276 SUPERFAMILY SSF55920 23 270 2.22E-84 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AMC99_01886 52117d8470baa5a6815917ae24fc9e7b 276 Hamap MF_01974 Methionine aminopeptidase [map]. 19 266 39.457 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMC99_01886 52117d8470baa5a6815917ae24fc9e7b 276 Pfam PF00557 Metallopeptidase family M24 28 257 3.4E-52 T 11-10-2018 IPR000994 Peptidase M24 AMC99_01886 52117d8470baa5a6815917ae24fc9e7b 276 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 20 265 2.9E-88 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AMC99_01165 e8ed235dee39577c5ebb67a5592d7631 556 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMC99_01165 e8ed235dee39577c5ebb67a5592d7631 556 Pfam PF00083 Sugar (and other) transporter 21 231 5.3E-28 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AMC99_01165 e8ed235dee39577c5ebb67a5592d7631 556 Gene3D G3DSA:1.20.1250.20 437 534 5.7E-7 T 11-10-2018 AMC99_01165 e8ed235dee39577c5ebb67a5592d7631 556 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 AMC99_01165 e8ed235dee39577c5ebb67a5592d7631 556 SUPERFAMILY SSF103473 10 535 5.23E-55 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_01165 e8ed235dee39577c5ebb67a5592d7631 556 Gene3D G3DSA:1.20.1250.20 17 355 1.5E-52 T 11-10-2018 AMC99_02077 db3cb5ec4b52e478e2631c0dd6d9ac40 374 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 AMC99_02077 db3cb5ec4b52e478e2631c0dd6d9ac40 374 Gene3D G3DSA:1.20.1090.10 184 374 2.8E-52 T 11-10-2018 AMC99_02077 db3cb5ec4b52e478e2631c0dd6d9ac40 374 SUPERFAMILY SSF56796 2 371 2.09E-85 T 11-10-2018 AMC99_02077 db3cb5ec4b52e478e2631c0dd6d9ac40 374 Pfam PF00465 Iron-containing alcohol dehydrogenase 5 362 8.4E-80 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 AMC99_02077 db3cb5ec4b52e478e2631c0dd6d9ac40 374 Gene3D G3DSA:3.40.50.1970 2 182 2.4E-42 T 11-10-2018 AMC99_02023 591e43b09cfbdcb9028efb44f0e4ac8c 685 Gene3D G3DSA:2.170.130.10 47 175 8.9E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02023 591e43b09cfbdcb9028efb44f0e4ac8c 685 Gene3D G3DSA:2.40.170.20 176 682 7.3E-61 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_02023 591e43b09cfbdcb9028efb44f0e4ac8c 685 Pfam PF00593 TonB dependent receptor 235 682 5.8E-45 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02023 591e43b09cfbdcb9028efb44f0e4ac8c 685 SUPERFAMILY SSF56935 48 683 1.28E-83 T 11-10-2018 AMC99_02023 591e43b09cfbdcb9028efb44f0e4ac8c 685 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 172 9.9E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_00157 807de43ac4e66e45e3e2581692bd8bca 276 SUPERFAMILY SSF53927 14 254 2.65E-66 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_00157 807de43ac4e66e45e3e2581692bd8bca 276 PIRSF PIRSF015626 9 259 1.9E-67 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMC99_00157 807de43ac4e66e45e3e2581692bd8bca 276 Pfam PF02634 FdhD/NarQ family 26 253 1.0E-65 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMC99_00157 807de43ac4e66e45e3e2581692bd8bca 276 Gene3D G3DSA:3.40.140.10 116 264 2.2E-42 T 11-10-2018 AMC99_00157 807de43ac4e66e45e3e2581692bd8bca 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 1 263 28.05 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMC99_00157 807de43ac4e66e45e3e2581692bd8bca 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 24 252 8.6E-53 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 AMC99_00157 807de43ac4e66e45e3e2581692bd8bca 276 Gene3D G3DSA:3.10.20.10 28 109 5.1E-9 T 11-10-2018 AMC99_01871 0bd832192a302d3fd47eb52a640f11fc 573 Pfam PF00905 Penicillin binding protein transpeptidase domain 243 521 7.6E-53 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMC99_01871 0bd832192a302d3fd47eb52a640f11fc 573 Gene3D G3DSA:3.90.1310.30 66 220 2.5E-24 T 11-10-2018 AMC99_01871 0bd832192a302d3fd47eb52a640f11fc 573 SUPERFAMILY SSF56519 69 204 5.89E-26 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AMC99_01871 0bd832192a302d3fd47eb52a640f11fc 573 SUPERFAMILY SSF56601 216 554 2.05E-76 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_01871 0bd832192a302d3fd47eb52a640f11fc 573 Gene3D G3DSA:3.30.450.330 221 542 3.3E-82 T 11-10-2018 AMC99_01871 0bd832192a302d3fd47eb52a640f11fc 573 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 188 3.3E-11 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMC99_01871 0bd832192a302d3fd47eb52a640f11fc 573 Gene3D G3DSA:3.40.710.10 277 460 3.3E-82 T 11-10-2018 AMC99_00795 2aa84d0651de28f02cabb0bc5ba83cbd 209 SUPERFAMILY SSF52833 3 207 3.4E-70 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00795 2aa84d0651de28f02cabb0bc5ba83cbd 209 Gene3D G3DSA:3.40.30.10 1 145 1.8E-51 T 11-10-2018 AMC99_00795 2aa84d0651de28f02cabb0bc5ba83cbd 209 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 195 8.7E-14 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_00795 2aa84d0651de28f02cabb0bc5ba83cbd 209 Pfam PF00578 AhpC/TSA family 5 135 1.1E-31 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_00795 2aa84d0651de28f02cabb0bc5ba83cbd 209 Gene3D G3DSA:3.30.1020.10 146 208 2.7E-27 T 11-10-2018 AMC99_00795 2aa84d0651de28f02cabb0bc5ba83cbd 209 PIRSF PIRSF000239 1 208 1.3E-79 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_00451 b36c78d869ce90abb082d80308a21567 285 PIRSF PIRSF000166 2 285 3.8E-104 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMC99_00451 b36c78d869ce90abb082d80308a21567 285 SUPERFAMILY SSF102886 3 284 8.37E-105 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMC99_00451 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 101 125 1.7E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMC99_00451 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 37 53 1.7E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMC99_00451 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 167 196 1.7E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMC99_00451 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 242 269 1.7E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMC99_00451 b36c78d869ce90abb082d80308a21567 285 PRINTS PR00073 Coprogen oxidase signature 270 285 1.7E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMC99_00451 b36c78d869ce90abb082d80308a21567 285 Gene3D G3DSA:3.40.1500.10 1 285 5.4E-102 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMC99_00451 b36c78d869ce90abb082d80308a21567 285 Pfam PF01218 Coproporphyrinogen III oxidase 12 285 8.3E-89 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AMC99_02749 487ba6429dadd5c58a25cee538d7c7c1 214 Pfam PF04199 Putative cyclase 10 154 2.1E-17 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMC99_02749 487ba6429dadd5c58a25cee538d7c7c1 214 Gene3D G3DSA:3.50.30.50 5 214 1.0E-64 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMC99_02749 487ba6429dadd5c58a25cee538d7c7c1 214 SUPERFAMILY SSF102198 7 209 8.63E-53 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMC99_02749 487ba6429dadd5c58a25cee538d7c7c1 214 TIGRFAM TIGR03035 trp_arylform: arylformamidase 9 211 1.1E-75 T 11-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMC99_02749 487ba6429dadd5c58a25cee538d7c7c1 214 Hamap MF_01969 Kynurenine formamidase [kynB]. 8 211 41.692 T 11-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 AMC99_01569 3101d2c4052d2e0942d04b02bc589248 463 Gene3D G3DSA:3.30.450.380 2 205 2.0E-41 T 11-10-2018 AMC99_01569 3101d2c4052d2e0942d04b02bc589248 463 Pfam PF00437 Type II/IV secretion system protein 110 386 2.5E-80 T 11-10-2018 IPR001482 Type II/IV secretion system protein AMC99_01569 3101d2c4052d2e0942d04b02bc589248 463 SUPERFAMILY SSF52540 90 423 1.94E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01569 3101d2c4052d2e0942d04b02bc589248 463 SMART SM00382 234 364 8.4E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01569 3101d2c4052d2e0942d04b02bc589248 463 Gene3D G3DSA:3.40.50.300 207 453 2.2E-72 T 11-10-2018 AMC99_01772 019e812058fbf80810a6aff5abc16ace 223 Gene3D G3DSA:3.30.1150.10 111 222 3.0E-11 T 11-10-2018 AMC99_01772 019e812058fbf80810a6aff5abc16ace 223 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 147 220 1.1E-11 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 AMC99_01772 019e812058fbf80810a6aff5abc16ace 223 SUPERFAMILY SSF74653 57 203 4.12E-10 T 11-10-2018 AMC99_01772 019e812058fbf80810a6aff5abc16ace 223 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 145 209 1.0E-10 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AMC99_02123 7b7ea3d5cfca0aeb5f63c9986a569441 317 SUPERFAMILY SSF50630 181 285 3.19E-5 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMC99_02123 7b7ea3d5cfca0aeb5f63c9986a569441 317 Pfam PF13650 Aspartyl protease 187 278 5.8E-7 T 11-10-2018 AMC99_02123 7b7ea3d5cfca0aeb5f63c9986a569441 317 Pfam PF13650 Aspartyl protease 51 138 2.5E-14 T 11-10-2018 AMC99_02123 7b7ea3d5cfca0aeb5f63c9986a569441 317 Gene3D G3DSA:2.40.70.10 163 297 2.3E-13 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMC99_02123 7b7ea3d5cfca0aeb5f63c9986a569441 317 Gene3D G3DSA:2.40.70.10 32 161 3.0E-19 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMC99_02123 7b7ea3d5cfca0aeb5f63c9986a569441 317 SUPERFAMILY SSF50630 43 149 7.5E-12 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMC99_00582 f7326a785ba6c1d0fe6c2dbef8af82da 159 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 96 6.0E-24 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00582 f7326a785ba6c1d0fe6c2dbef8af82da 159 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 97 9.8E-33 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00582 f7326a785ba6c1d0fe6c2dbef8af82da 159 SUPERFAMILY SSF141091 1 97 2.22E-30 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00582 f7326a785ba6c1d0fe6c2dbef8af82da 159 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 99 23.199 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01783 33a1b9c5615f42cfef9f001ec3125f38 267 SUPERFAMILY SSF75217 110 262 6.28E-38 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMC99_01783 33a1b9c5615f42cfef9f001ec3125f38 267 SUPERFAMILY SSF55315 5 106 1.48E-21 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AMC99_01783 33a1b9c5615f42cfef9f001ec3125f38 267 SMART SM00967 33 109 1.2E-8 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AMC99_01783 33a1b9c5615f42cfef9f001ec3125f38 267 Gene3D G3DSA:3.30.1330.30 4 105 3.3E-22 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AMC99_01783 33a1b9c5615f42cfef9f001ec3125f38 267 Gene3D G3DSA:3.40.1280.10 115 266 5.6E-44 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_01783 33a1b9c5615f42cfef9f001ec3125f38 267 Pfam PF00588 SpoU rRNA Methylase family 121 259 1.7E-29 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMC99_02360 0367dfcf058e91dde5ee366ed47d9f9b 410 Gene3D G3DSA:3.40.47.10 132 407 5.0E-134 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_02360 0367dfcf058e91dde5ee366ed47d9f9b 410 PIRSF PIRSF000429 1 410 6.4E-122 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_02360 0367dfcf058e91dde5ee366ed47d9f9b 410 Pfam PF00108 Thiolase, N-terminal domain 8 274 2.0E-68 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMC99_02360 0367dfcf058e91dde5ee366ed47d9f9b 410 Gene3D G3DSA:3.40.47.10 9 287 5.0E-134 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_02360 0367dfcf058e91dde5ee366ed47d9f9b 410 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 407 3.0E-123 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_02360 0367dfcf058e91dde5ee366ed47d9f9b 410 Pfam PF02803 Thiolase, C-terminal domain 287 408 6.2E-38 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMC99_02360 0367dfcf058e91dde5ee366ed47d9f9b 410 SUPERFAMILY SSF53901 7 281 3.26E-75 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_02360 0367dfcf058e91dde5ee366ed47d9f9b 410 SUPERFAMILY SSF53901 283 408 1.08E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01833 f6057909cf12d804fea197a961f17075 733 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 8 119 1.0E-12 T 11-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal AMC99_01833 f6057909cf12d804fea197a961f17075 733 SUPERFAMILY SSF56747 7 128 3.27E-7 T 11-10-2018 AMC99_01833 f6057909cf12d804fea197a961f17075 733 Pfam PF08707 Primase C terminal 2 (PriCT-2) 159 223 3.0E-9 T 11-10-2018 IPR014819 Primase, C-terminal 2 GO:0016817 AMC99_00779 99abd528bfc560bfd625dc7a7a7d6c21 461 Pfam PF02754 Cysteine-rich domain 256 354 7.3E-6 T 11-10-2018 IPR004017 Cysteine-rich domain AMC99_00634 20feeb8d77a561a53a8b36fc397e6639 122 SUPERFAMILY SSF46785 23 117 1.47E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00634 20feeb8d77a561a53a8b36fc397e6639 122 Pfam PF12840 Helix-turn-helix domain 27 85 4.7E-11 T 11-10-2018 AMC99_00634 20feeb8d77a561a53a8b36fc397e6639 122 Gene3D G3DSA:1.10.10.10 17 122 5.8E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00634 20feeb8d77a561a53a8b36fc397e6639 122 SMART SM00418 27 105 3.0E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00647 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 4 150 1.4E-42 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMC99_00647 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 SUPERFAMILY SSF51230 77 150 2.36E-22 T 11-10-2018 IPR011053 Single hybrid motif AMC99_00647 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AMC99_00647 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 Gene3D G3DSA:2.40.50.100 74 150 1.9E-26 T 11-10-2018 AMC99_00647 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 1.1E-13 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMC99_00647 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 1.1E-13 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMC99_00647 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 1.1E-13 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 AMC99_00647 ec0bb9d1144ac1c5ea50b45d2c8a56b1 151 Pfam PF00364 Biotin-requiring enzyme 78 150 8.8E-22 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AMC99_00672 8fd3a8311c64886d1c925394eb7655b8 113 Pfam PF02575 YbaB/EbfC DNA-binding family 13 101 6.7E-28 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_00672 8fd3a8311c64886d1c925394eb7655b8 113 Gene3D G3DSA:3.30.1310.10 1 111 1.1E-32 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMC99_00672 8fd3a8311c64886d1c925394eb7655b8 113 SUPERFAMILY SSF82607 13 105 2.62E-28 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMC99_00672 8fd3a8311c64886d1c925394eb7655b8 113 PIRSF PIRSF004555 1 111 7.4E-33 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_00672 8fd3a8311c64886d1c925394eb7655b8 113 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 100 18.482 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_00672 8fd3a8311c64886d1c925394eb7655b8 113 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 7 107 6.7E-21 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMC99_01430 aeb8e86b6632e53889f4bd29c8aae948 252 Pfam PF00119 ATP synthase A chain 29 245 1.4E-55 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01430 aeb8e86b6632e53889f4bd29c8aae948 252 SUPERFAMILY SSF81336 75 246 6.02E-42 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01430 aeb8e86b6632e53889f4bd29c8aae948 252 PRINTS PR00123 ATP synthase A subunit signature 232 247 6.2E-30 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01430 aeb8e86b6632e53889f4bd29c8aae948 252 PRINTS PR00123 ATP synthase A subunit signature 171 193 6.2E-30 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01430 aeb8e86b6632e53889f4bd29c8aae948 252 PRINTS PR00123 ATP synthase A subunit signature 84 100 6.2E-30 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01430 aeb8e86b6632e53889f4bd29c8aae948 252 PRINTS PR00123 ATP synthase A subunit signature 151 166 6.2E-30 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01430 aeb8e86b6632e53889f4bd29c8aae948 252 Gene3D G3DSA:1.20.120.220 75 252 6.3E-34 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01430 aeb8e86b6632e53889f4bd29c8aae948 252 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 3 248 5.5E-60 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01430 aeb8e86b6632e53889f4bd29c8aae948 252 Hamap MF_01393 ATP synthase subunit a [atpB]. 2 252 15.421 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_00249 fcf08a3e6eeee4d4553c2e2abf80aaf7 227 Gene3D G3DSA:3.30.160.670 40 208 2.8E-12 T 11-10-2018 AMC99_00249 fcf08a3e6eeee4d4553c2e2abf80aaf7 227 Pfam PF13590 Domain of unknown function (DUF4136) 36 208 1.7E-22 T 11-10-2018 IPR025411 Domain of unknown function DUF4136 AMC99_02708 10c47e8add68a00def69f0f94f405c86 920 Pfam PF00593 TonB dependent receptor 406 917 1.6E-38 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02708 10c47e8add68a00def69f0f94f405c86 920 Gene3D G3DSA:2.170.130.10 41 185 1.3E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02708 10c47e8add68a00def69f0f94f405c86 920 SUPERFAMILY SSF56935 47 918 2.27E-101 T 11-10-2018 AMC99_02708 10c47e8add68a00def69f0f94f405c86 920 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 181 7.6E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_02103 2dbecfb6c25c534c259a150c282d0ee7 87 SUPERFAMILY SSF47226 4 84 4.84E-14 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMC99_02103 2dbecfb6c25c534c259a150c282d0ee7 87 Pfam PF01627 Hpt domain 7 86 4.7E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 AMC99_02103 2dbecfb6c25c534c259a150c282d0ee7 87 Gene3D G3DSA:1.20.120.160 2 87 5.4E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMC99_00387 96065b3e2c65a875889979bbed2349ec 372 SUPERFAMILY SSF51412 5 364 1.98E-47 T 11-10-2018 AMC99_00387 96065b3e2c65a875889979bbed2349ec 372 Pfam PF03060 Nitronate monooxygenase 22 356 1.5E-44 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMC99_00387 96065b3e2c65a875889979bbed2349ec 372 Gene3D G3DSA:3.20.20.70 3 366 9.1E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02170 075eeb4382f1faa93b067d3b37824f46 326 Pfam PF05275 Copper resistance protein B precursor (CopB) 122 326 8.1E-82 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AMC99_02419 89ecca21bdb3713eae8cc703af0dfa9b 1565 SUPERFAMILY SSF51735 906 1196 2.25E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02419 89ecca21bdb3713eae8cc703af0dfa9b 1565 SUPERFAMILY SSF53223 726 917 1.34E-20 T 11-10-2018 AMC99_02419 89ecca21bdb3713eae8cc703af0dfa9b 1565 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 63 1553 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMC99_02419 89ecca21bdb3713eae8cc703af0dfa9b 1565 PIRSF PIRSF036761 2 1565 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AMC99_01311 d8e177126d0ae2de60ffc7dca396f61c 242 PIRSF PIRSF029730 1 241 5.3E-69 T 11-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 AMC99_01311 d8e177126d0ae2de60ffc7dca396f61c 242 Pfam PF05013 N-formylglutamate amidohydrolase 17 214 4.0E-35 T 11-10-2018 IPR007709 N-formylglutamate amidohydrolase AMC99_01311 d8e177126d0ae2de60ffc7dca396f61c 242 Gene3D G3DSA:3.40.630.40 8 239 5.9E-65 T 11-10-2018 AMC99_01311 d8e177126d0ae2de60ffc7dca396f61c 242 SUPERFAMILY SSF53187 4 233 1.16E-57 T 11-10-2018 AMC99_01405 c1ba74743cc457e062300d0686e27ac8 362 Pfam PF13437 HlyD family secretion protein 228 338 2.8E-12 T 11-10-2018 AMC99_01405 c1ba74743cc457e062300d0686e27ac8 362 Pfam PF13533 Biotin-lipoyl like 70 117 3.3E-17 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMC99_01405 c1ba74743cc457e062300d0686e27ac8 362 Gene3D G3DSA:1.10.287.470 102 188 2.1E-20 T 11-10-2018 AMC99_01405 c1ba74743cc457e062300d0686e27ac8 362 Gene3D G3DSA:2.40.50.100 68 193 2.1E-20 T 11-10-2018 AMC99_01405 c1ba74743cc457e062300d0686e27ac8 362 Gene3D G3DSA:2.40.30.170 244 362 2.2E-36 T 11-10-2018 AMC99_01405 c1ba74743cc457e062300d0686e27ac8 362 SUPERFAMILY SSF111369 185 283 2.09E-6 T 11-10-2018 AMC99_01405 c1ba74743cc457e062300d0686e27ac8 362 SUPERFAMILY SSF111369 67 187 6.8E-13 T 11-10-2018 AMC99_02016 311e3994e18ba0198f7f3cf9e055ddff 410 Pfam PF01979 Amidohydrolase family 149 406 3.4E-11 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMC99_02016 311e3994e18ba0198f7f3cf9e055ddff 410 SUPERFAMILY SSF51338 7 408 6.34E-24 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_02016 311e3994e18ba0198f7f3cf9e055ddff 410 SUPERFAMILY SSF51556 47 355 4.86E-75 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_02016 311e3994e18ba0198f7f3cf9e055ddff 410 Gene3D G3DSA:3.20.20.140 58 355 5.3E-91 T 11-10-2018 AMC99_02016 311e3994e18ba0198f7f3cf9e055ddff 410 Gene3D G3DSA:2.30.40.10 13 405 5.3E-91 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AMC99_02540 8399bc8eece211d12f6cd12730a3b7ff 195 Pfam PF02545 Maf-like protein 3 189 9.8E-34 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMC99_02540 8399bc8eece211d12f6cd12730a3b7ff 195 SUPERFAMILY SSF52972 2 189 6.08E-43 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_02540 8399bc8eece211d12f6cd12730a3b7ff 195 PIRSF PIRSF006305 1 194 1.5E-36 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMC99_02540 8399bc8eece211d12f6cd12730a3b7ff 195 Hamap MF_00528 Septum formation protein Maf [maf]. 2 194 23.696 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMC99_02540 8399bc8eece211d12f6cd12730a3b7ff 195 Gene3D G3DSA:3.90.950.10 2 194 2.8E-43 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_01582 865f956ac31c6edd09d66b94cb7082c0 424 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 252 423 2.1E-14 T 11-10-2018 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00514+2.4.1.109|KEGG: 00515+2.4.1.109|MetaCyc: PWY-7921|MetaCyc: PWY-7922|MetaCyc: PWY-7979|Reactome: R-HSA-5173105 AMC99_01582 865f956ac31c6edd09d66b94cb7082c0 424 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 82 238 9.3E-12 T 11-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 AMC99_01551 6da969344c3da35757d813f129fa096b 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01551 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01551 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01551 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01551 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01551 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01551 6da969344c3da35757d813f129fa096b 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01551 6da969344c3da35757d813f129fa096b 123 Pfam PF00164 Ribosomal protein S12/S23 14 123 4.0E-42 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01551 6da969344c3da35757d813f129fa096b 123 SUPERFAMILY SSF50249 2 123 3.0E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01551 6da969344c3da35757d813f129fa096b 123 Gene3D G3DSA:2.40.50.140 1 123 4.4E-63 T 11-10-2018 AMC99_01551 6da969344c3da35757d813f129fa096b 123 PIRSF PIRSF002133 1 123 4.4E-55 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01551 6da969344c3da35757d813f129fa096b 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.9E-67 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01551 6da969344c3da35757d813f129fa096b 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.104 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01786 2e4b094a37e6fe77f0e3748299e5a1fb 132 Pfam PF03860 Domain of Unknown Function (DUF326) 105 123 3.0E-6 T 11-10-2018 IPR005560 Protein of unknown function DUF326 AMC99_01786 2e4b094a37e6fe77f0e3748299e5a1fb 132 Gene3D G3DSA:1.20.1270.360 18 125 3.9E-23 T 11-10-2018 AMC99_01934 8dec7cb001fdf4535dead12a851caf4a 199 SMART SM00859 2 91 0.0095 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMC99_01934 8dec7cb001fdf4535dead12a851caf4a 199 SUPERFAMILY SSF51735 1 192 1.65E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01934 8dec7cb001fdf4535dead12a851caf4a 199 Pfam PF13460 NAD(P)H-binding 7 184 1.1E-39 T 11-10-2018 IPR016040 NAD(P)-binding domain AMC99_01934 8dec7cb001fdf4535dead12a851caf4a 199 Gene3D G3DSA:3.40.50.720 2 198 5.8E-46 T 11-10-2018 AMC99_00609 1d99e3137d8233b775c2dbd551b7fa65 897 Gene3D G3DSA:3.40.50.300 683 861 1.0E-22 T 11-10-2018 AMC99_00609 1d99e3137d8233b775c2dbd551b7fa65 897 SMART SM00491 718 854 1.5E-6 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMC99_00609 1d99e3137d8233b775c2dbd551b7fa65 897 SUPERFAMILY SSF52540 196 804 1.93E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00609 1d99e3137d8233b775c2dbd551b7fa65 897 Gene3D G3DSA:3.40.50.300 168 414 4.4E-27 T 11-10-2018 AMC99_00609 1d99e3137d8233b775c2dbd551b7fa65 897 Pfam PF13307 Helicase C-terminal domain 702 844 6.7E-18 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMC99_01243 d1aea616b720887f3cedeab6510b005c 553 Gene3D G3DSA:3.60.15.10 15 441 2.7E-144 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_01243 d1aea616b720887f3cedeab6510b005c 553 SMART SM00849 23 219 8.9E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_01243 d1aea616b720887f3cedeab6510b005c 553 SUPERFAMILY SSF56281 13 425 2.62E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_01243 d1aea616b720887f3cedeab6510b005c 553 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 365 405 3.9E-7 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMC99_01243 d1aea616b720887f3cedeab6510b005c 553 Pfam PF00753 Metallo-beta-lactamase superfamily 32 179 1.5E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_01243 d1aea616b720887f3cedeab6510b005c 553 Gene3D G3DSA:3.40.50.10710 211 360 2.7E-144 T 11-10-2018 AMC99_02294 26635806a310940d8b03c8490ff1a7f7 314 Gene3D G3DSA:3.40.50.300 2 247 8.2E-64 T 11-10-2018 AMC99_02294 26635806a310940d8b03c8490ff1a7f7 314 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_02294 26635806a310940d8b03c8490ff1a7f7 314 Pfam PF00005 ABC transporter 31 173 2.1E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_02294 26635806a310940d8b03c8490ff1a7f7 314 SMART SM00382 40 229 6.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02294 26635806a310940d8b03c8490ff1a7f7 314 SUPERFAMILY SSF52540 6 235 6.43E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 ProSitePatterns PS00079 Multicopper oxidases signature 1. 555 575 - T 11-10-2018 IPR033138 Multicopper oxidases, conserved site AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 Pfam PF07731 Multicopper oxidase 463 579 5.6E-27 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 SUPERFAMILY SSF49503 168 363 4.56E-50 T 11-10-2018 IPR008972 Cupredoxin AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 Gene3D G3DSA:2.60.40.420 34 162 4.5E-37 T 11-10-2018 IPR008972 Cupredoxin AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 SUPERFAMILY SSF49503 424 577 1.4E-37 T 11-10-2018 IPR008972 Cupredoxin AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 Pfam PF00394 Multicopper oxidase 224 328 8.1E-25 T 11-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 3 578 1.1E-220 T 11-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 Gene3D G3DSA:2.60.40.420 168 364 5.3E-36 T 11-10-2018 IPR008972 Cupredoxin AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 Pfam PF07732 Multicopper oxidase 62 163 1.3E-38 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 SUPERFAMILY SSF49503 56 191 7.14E-37 T 11-10-2018 IPR008972 Cupredoxin AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 Gene3D G3DSA:2.60.40.420 439 580 4.7E-33 T 11-10-2018 IPR008972 Cupredoxin AMC99_02169 01c9183c78c546db4659f2b4ff4f82d9 585 ProSitePatterns PS00080 Multicopper oxidases signature 2. 560 571 - T 11-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 AMC99_01805 e7f8d13389ce0c6054e357288e6d4fa8 87 Gene3D G3DSA:2.40.50.140 1 65 1.6E-6 T 11-10-2018 AMC99_02191 66d255b1abf773c730f01493065f9db3 479 SUPERFAMILY SSF56801 4 478 1.09E-95 T 11-10-2018 AMC99_02191 66d255b1abf773c730f01493065f9db3 479 Pfam PF00501 AMP-binding enzyme 9 393 1.9E-59 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_02191 66d255b1abf773c730f01493065f9db3 479 Gene3D G3DSA:3.40.50.12780 5 387 9.9E-84 T 11-10-2018 AMC99_02191 66d255b1abf773c730f01493065f9db3 479 Gene3D G3DSA:3.30.300.30 388 479 4.7E-24 T 11-10-2018 AMC99_00235 64b9cac9aebb90cf8c2dc388e3428180 112 SUPERFAMILY SSF51316 4 100 9.63E-21 T 11-10-2018 IPR011057 Mss4-like superfamily AMC99_00235 64b9cac9aebb90cf8c2dc388e3428180 112 Gene3D G3DSA:2.170.150.70 4 111 3.5E-22 T 11-10-2018 AMC99_00235 64b9cac9aebb90cf8c2dc388e3428180 112 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 94 2.5E-5 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AMC99_02192 26e1f488b8e4197bbd9a250d99b46ed2 348 Gene3D G3DSA:3.40.50.1110 228 345 2.5E-5 T 11-10-2018 IPR036514 SGNH hydrolase superfamily AMC99_02192 26e1f488b8e4197bbd9a250d99b46ed2 348 SUPERFAMILY SSF52266 258 346 4.03E-7 T 11-10-2018 AMC99_00730 343f19ac75f9a21d1cdc3c4f7ac34c6b 433 Pfam PF13520 Amino acid permease 12 397 7.1E-39 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_00730 343f19ac75f9a21d1cdc3c4f7ac34c6b 433 PIRSF PIRSF006060 1 430 1.4E-65 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_00730 343f19ac75f9a21d1cdc3c4f7ac34c6b 433 Gene3D G3DSA:1.20.1740.10 8 428 1.1E-64 T 11-10-2018 AMC99_02126 4084b07a4561d1eb4e4ca776943a3dfa 497 Gene3D G3DSA:3.30.750.24 385 485 8.8E-24 T 11-10-2018 IPR036513 STAS domain superfamily AMC99_02126 4084b07a4561d1eb4e4ca776943a3dfa 497 SUPERFAMILY SSF52091 387 486 2.55E-14 T 11-10-2018 IPR036513 STAS domain superfamily AMC99_02126 4084b07a4561d1eb4e4ca776943a3dfa 497 Pfam PF01740 STAS domain 394 486 1.9E-10 T 11-10-2018 IPR002645 STAS domain AMC99_02126 4084b07a4561d1eb4e4ca776943a3dfa 497 Pfam PF00916 Sulfate permease family 142 342 2.3E-27 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 AMC99_02183 1c9da02b82a6522580545a5ba6d2f820 266 SUPERFAMILY SSF55729 52 214 6.67E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02183 1c9da02b82a6522580545a5ba6d2f820 266 Pfam PF13480 Acetyltransferase (GNAT) domain 63 208 2.4E-22 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AMC99_01384 667b2a98928066fc6ade6666204707ac 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 195 6.4E-4 T 11-10-2018 AMC99_01384 667b2a98928066fc6ade6666204707ac 253 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 250 1.9E-97 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMC99_01384 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01384 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01384 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 7.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01384 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01384 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 7.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01384 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 7.0E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01384 667b2a98928066fc6ade6666204707ac 253 SUPERFAMILY SSF51735 5 251 1.65E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01384 667b2a98928066fc6ade6666204707ac 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMC99_01384 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01384 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01384 667b2a98928066fc6ade6666204707ac 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_01384 667b2a98928066fc6ade6666204707ac 253 Gene3D G3DSA:3.40.50.720 1 252 6.4E-83 T 11-10-2018 AMC99_01384 667b2a98928066fc6ade6666204707ac 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 2.9E-66 T 11-10-2018 AMC99_00226 78abdcf6469607721db61af43dafe522 155 Gene3D G3DSA:2.60.120.10 1 155 9.0E-44 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_00226 78abdcf6469607721db61af43dafe522 155 Pfam PF07883 Cupin domain 46 117 2.8E-17 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AMC99_00226 78abdcf6469607721db61af43dafe522 155 SUPERFAMILY SSF51182 22 151 2.32E-23 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 SUPERFAMILY SSF48264 44 444 1.28E-83 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 395 406 8.3E-38 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 195 210 8.3E-38 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 336 363 8.3E-38 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 319 330 8.3E-38 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 239 261 8.3E-38 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 364 379 8.3E-38 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 132 143 8.3E-38 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 PRINTS PR00359 B-class P450 signature 386 395 8.3E-38 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 388 397 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 Gene3D G3DSA:1.10.630.10 15 445 4.4E-113 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_02425 dfc1dab9fa46428181da2ecfefc1b0f7 446 Pfam PF00067 Cytochrome P450 239 412 2.7E-23 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 AMC99_00579 e18a56a9f5f67fd3a73bde2bfd90bd35 156 SUPERFAMILY SSF54690 22 154 1.44E-39 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMC99_00579 e18a56a9f5f67fd3a73bde2bfd90bd35 156 Pfam PF02391 MoaE protein 20 124 2.1E-26 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMC99_00579 e18a56a9f5f67fd3a73bde2bfd90bd35 156 Gene3D G3DSA:3.90.1170.40 9 154 1.6E-36 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 AMC99_00180 66cae9d0bfed99f34a5e1b3324fd3f77 736 SUPERFAMILY SSF52540 540 720 6.84E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00180 66cae9d0bfed99f34a5e1b3324fd3f77 736 Gene3D G3DSA:3.40.50.300 469 734 9.9E-61 T 11-10-2018 AMC99_00180 66cae9d0bfed99f34a5e1b3324fd3f77 736 Pfam PF13614 AAA domain 549 664 1.7E-7 T 11-10-2018 IPR025669 AAA domain AMC99_00180 66cae9d0bfed99f34a5e1b3324fd3f77 736 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 723 8.0E-42 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 AMC99_02141 f694da9fce60b26344d216a6d168ca9d 184 Pfam PF14352 Domain of unknown function (DUF4402) 57 183 1.7E-7 T 11-10-2018 IPR025514 Protein of unknown function DUF4402 AMC99_02261 cf1d42f7b724da9f7208e5b3ad486087 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 241 248 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMC99_02261 cf1d42f7b724da9f7208e5b3ad486087 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 269 280 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMC99_02261 cf1d42f7b724da9f7208e5b3ad486087 475 Gene3D G3DSA:3.40.605.10 18 465 1.9E-170 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_02261 cf1d42f7b724da9f7208e5b3ad486087 475 Gene3D G3DSA:3.40.309.10 248 438 1.9E-170 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_02261 cf1d42f7b724da9f7208e5b3ad486087 475 SUPERFAMILY SSF53720 3 468 1.57E-160 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_02261 cf1d42f7b724da9f7208e5b3ad486087 475 Pfam PF00171 Aldehyde dehydrogenase family 18 464 1.1E-158 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_02456 346a74c3bd1300ca277588db30412e26 332 SMART SM00558 110 270 9.0E-4 T 11-10-2018 IPR003347 JmjC domain AMC99_02456 346a74c3bd1300ca277588db30412e26 332 Gene3D G3DSA:2.60.120.1660 2 257 7.1E-44 T 11-10-2018 AMC99_02456 346a74c3bd1300ca277588db30412e26 332 SUPERFAMILY SSF51197 23 296 8.65E-49 T 11-10-2018 AMC99_02456 346a74c3bd1300ca277588db30412e26 332 Pfam PF13621 Cupin-like domain 20 254 2.4E-51 T 11-10-2018 AMC99_01108 71d90f699bce3af54e7e79703ecb8fc6 293 Pfam PF01963 TraB family 35 291 1.1E-49 T 11-10-2018 IPR002816 Pheromone shutdown, TraB AMC99_00552 880a5ed01bb282e41c70ac493bad5b14 136 Gene3D G3DSA:3.10.129.10 3 135 2.0E-35 T 11-10-2018 AMC99_00552 880a5ed01bb282e41c70ac493bad5b14 136 SUPERFAMILY SSF54637 11 128 7.15E-21 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00552 880a5ed01bb282e41c70ac493bad5b14 136 Pfam PF03061 Thioesterase superfamily 43 119 1.0E-9 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 Gene3D G3DSA:2.170.230.10 122 203 8.7E-52 T 11-10-2018 AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 ProSitePatterns PS00760 Signal peptidases I lysine active site. 113 125 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 111 123 5.4E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 42 58 5.4E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 5.4E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 SUPERFAMILY SSF51306 40 274 9.42E-59 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 28 251 5.3E-43 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 Pfam PF00717 Peptidase S24-like 49 133 4.3E-17 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_00911 d90bef9182bd2606fca3e0bdeedc59a4 276 Gene3D G3DSA:2.10.109.10 40 250 8.7E-52 T 11-10-2018 AMC99_00303 eb94e5e54d22cd09f27d92b4174711cd 74 Pfam PF06906 Protein of unknown function (DUF1272) 1 56 2.3E-26 T 11-10-2018 IPR010696 Protein of unknown function DUF1272 AMC99_00890 2625fe83a99b216b9b86088cfe2f3564 407 SUPERFAMILY SSF51735 7 156 5.92E-14 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00890 2625fe83a99b216b9b86088cfe2f3564 407 Gene3D G3DSA:3.30.360.10 155 353 7.2E-143 T 11-10-2018 AMC99_00890 2625fe83a99b216b9b86088cfe2f3564 407 Gene3D G3DSA:3.40.50.720 9 396 7.2E-143 T 11-10-2018 AMC99_00890 2625fe83a99b216b9b86088cfe2f3564 407 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 145 394 3.5E-37 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 AMC99_00890 2625fe83a99b216b9b86088cfe2f3564 407 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 8 141 6.5E-34 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 AMC99_02312 07feb4629f8000505d9aeb7d7fd45689 210 Gene3D G3DSA:1.10.357.10 2 192 1.0E-51 T 11-10-2018 AMC99_02312 07feb4629f8000505d9aeb7d7fd45689 210 SUPERFAMILY SSF46689 9 65 2.1E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01924 bda57eca327f40401c27ae6df455cd98 364 Pfam PF08666 SAF domain 46 107 2.2E-10 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMC99_01924 bda57eca327f40401c27ae6df455cd98 364 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 260 1.6E-67 T 11-10-2018 IPR017592 Pilus assembly, Flp-type CpaB AMC99_01924 bda57eca327f40401c27ae6df455cd98 364 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 116 228 4.0E-35 T 11-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain AMC99_01924 bda57eca327f40401c27ae6df455cd98 364 SMART SM00858 44 110 4.8E-9 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 AMC99_02790 ab5fff0c53641abf3c732627773d4b93 341 Pfam PF13354 Beta-lactamase enzyme family 79 296 1.2E-38 T 11-10-2018 AMC99_02790 ab5fff0c53641abf3c732627773d4b93 341 PRINTS PR00118 Beta-lactamase class A signature 60 84 8.3E-16 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_02790 ab5fff0c53641abf3c732627773d4b93 341 PRINTS PR00118 Beta-lactamase class A signature 204 229 8.3E-16 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_02790 ab5fff0c53641abf3c732627773d4b93 341 PRINTS PR00118 Beta-lactamase class A signature 91 108 8.3E-16 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_02790 ab5fff0c53641abf3c732627773d4b93 341 PRINTS PR00118 Beta-lactamase class A signature 257 272 8.3E-16 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 AMC99_02790 ab5fff0c53641abf3c732627773d4b93 341 SUPERFAMILY SSF56601 56 322 4.47E-56 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_02790 ab5fff0c53641abf3c732627773d4b93 341 Gene3D G3DSA:3.40.710.10 52 330 6.7E-70 T 11-10-2018 AMC99_02790 ab5fff0c53641abf3c732627773d4b93 341 ProSitePatterns PS00146 Beta-lactamase class-A active site. 93 108 - T 11-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 AMC99_02401 62d2530a1e3dcf4edf547e31de3b9992 263 Pfam PF04305 Protein of unknown function (DUF455) 14 258 1.4E-92 T 11-10-2018 IPR007402 Protein of unknown function DUF455 AMC99_02401 62d2530a1e3dcf4edf547e31de3b9992 263 PIRSF PIRSF012318 1 263 2.3E-85 T 11-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 AMC99_02401 62d2530a1e3dcf4edf547e31de3b9992 263 Gene3D G3DSA:1.20.1260.10 78 250 1.7E-6 T 11-10-2018 IPR012347 Ferritin-like AMC99_02401 62d2530a1e3dcf4edf547e31de3b9992 263 SUPERFAMILY SSF47240 73 217 5.02E-17 T 11-10-2018 IPR009078 Ferritin-like superfamily AMC99_01611 caf248eb49f186e0fb43efbc8deb4435 307 SUPERFAMILY SSF54631 76 214 1.22E-28 T 11-10-2018 AMC99_01611 caf248eb49f186e0fb43efbc8deb4435 307 Pfam PF00571 CBS domain 87 139 4.7E-5 T 11-10-2018 IPR000644 CBS domain AMC99_01611 caf248eb49f186e0fb43efbc8deb4435 307 Gene3D G3DSA:3.30.465.10 214 306 2.2E-15 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AMC99_01611 caf248eb49f186e0fb43efbc8deb4435 307 SUPERFAMILY SSF56176 216 299 1.85E-14 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AMC99_01611 caf248eb49f186e0fb43efbc8deb4435 307 Gene3D G3DSA:3.10.580.10 63 213 8.3E-51 T 11-10-2018 AMC99_01611 caf248eb49f186e0fb43efbc8deb4435 307 SMART SM01091 218 299 2.0E-14 T 11-10-2018 IPR005170 Transporter-associated domain AMC99_01611 caf248eb49f186e0fb43efbc8deb4435 307 Pfam PF03471 Transporter associated domain 220 296 2.7E-13 T 11-10-2018 IPR005170 Transporter-associated domain AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PIRSF PIRSF004557 5 452 3.5E-110 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 3.8E-86 T 11-10-2018 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 3.8E-86 T 11-10-2018 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 326 348 3.8E-86 T 11-10-2018 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 3.8E-86 T 11-10-2018 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 160 185 3.8E-86 T 11-10-2018 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 278 297 3.8E-86 T 11-10-2018 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 186 209 3.8E-86 T 11-10-2018 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 413 431 3.8E-86 T 11-10-2018 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 381 399 3.8E-86 T 11-10-2018 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 SUPERFAMILY SSF103491 14 435 2.35E-124 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 Gene3D G3DSA:1.10.3370.10 12 440 1.0E-148 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 ProSitePatterns PS00756 Protein secY signature 2. 179 196 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 Pfam PF00344 SecY translocase 80 428 8.8E-107 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 439 2.9E-117 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AMC99_01525 a2d0c09d257642ec90173a1feedec6b2 454 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 444 27.79 T 11-10-2018 IPR026593 Protein translocase subunit SecY AMC99_00361 134078921fd927301aca01d35c894500 230 SUPERFAMILY SSF56925 51 230 1.15E-20 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMC99_00361 134078921fd927301aca01d35c894500 230 Pfam PF03922 OmpW family 25 230 5.4E-49 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 AMC99_00361 134078921fd927301aca01d35c894500 230 Gene3D G3DSA:2.40.160.20 21 230 3.0E-41 T 11-10-2018 AMC99_02380 45c47388f6a14d4d9cc861cf2c174002 395 Pfam PF04966 Carbohydrate-selective porin, OprB family 282 395 1.8E-10 T 11-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 AMC99_02380 45c47388f6a14d4d9cc861cf2c174002 395 Gene3D G3DSA:2.40.160.180 43 395 2.1E-12 T 11-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily AMC99_01223 1b4b7a69d60b1a38af295678f6d316c9 644 Pfam PF13145 PPIC-type PPIASE domain 253 372 1.6E-18 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AMC99_01223 1b4b7a69d60b1a38af295678f6d316c9 644 SUPERFAMILY SSF109998 47 296 2.75E-17 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AMC99_01223 1b4b7a69d60b1a38af295678f6d316c9 644 Gene3D G3DSA:3.10.50.40 266 386 3.2E-7 T 11-10-2018 AMC99_01223 1b4b7a69d60b1a38af295678f6d316c9 644 Pfam PF13624 SurA N-terminal domain 1 169 1.0E-29 T 11-10-2018 AMC99_01223 1b4b7a69d60b1a38af295678f6d316c9 644 Gene3D G3DSA:1.10.4030.30 49 173 6.7E-8 T 11-10-2018 AMC99_01223 1b4b7a69d60b1a38af295678f6d316c9 644 SUPERFAMILY SSF54534 273 359 3.66E-9 T 11-10-2018 AMC99_01769 43de2dd25068e5705cf56881ca251d43 357 Pfam PF00266 Aminotransferase class-V 2 342 7.5E-47 T 11-10-2018 IPR000192 Aminotransferase class V domain AMC99_01769 43de2dd25068e5705cf56881ca251d43 357 SUPERFAMILY SSF53383 1 354 1.18E-69 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01769 43de2dd25068e5705cf56881ca251d43 357 Gene3D G3DSA:3.90.1150.10 2 351 1.6E-95 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_01769 43de2dd25068e5705cf56881ca251d43 357 PIRSF PIRSF005572 1 356 6.3E-87 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AMC99_01769 43de2dd25068e5705cf56881ca251d43 357 Gene3D G3DSA:3.40.640.10 13 240 1.6E-95 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_02036 3ea8ee90f9f3854611eb03fc52326c02 330 Hamap MF_00524 Glucokinase [glk]. 7 326 31.784 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMC99_02036 3ea8ee90f9f3854611eb03fc52326c02 330 TIGRFAM TIGR00749 glk: glucokinase 11 320 1.0E-71 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMC99_02036 3ea8ee90f9f3854611eb03fc52326c02 330 Gene3D G3DSA:3.40.367.20 107 309 4.9E-89 T 11-10-2018 AMC99_02036 3ea8ee90f9f3854611eb03fc52326c02 330 Pfam PF02685 Glucokinase 11 324 1.5E-89 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMC99_02036 3ea8ee90f9f3854611eb03fc52326c02 330 Gene3D G3DSA:3.30.420.40 11 320 4.9E-89 T 11-10-2018 AMC99_02036 3ea8ee90f9f3854611eb03fc52326c02 330 SUPERFAMILY SSF53067 9 327 2.11E-53 T 11-10-2018 AMC99_00124 5d50347ee4573f3daddc0e6c78190b05 398 Pfam PF05940 NnrS protein 6 392 2.1E-44 T 11-10-2018 IPR010266 NnrS AMC99_02335 607d4dac9067ef79c8856259af00ce17 134 SUPERFAMILY SSF54637 6 130 2.19E-34 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_02335 607d4dac9067ef79c8856259af00ce17 134 Gene3D G3DSA:3.10.129.10 3 133 1.1E-29 T 11-10-2018 AMC99_02335 607d4dac9067ef79c8856259af00ce17 134 Pfam PF01643 Acyl-ACP thioesterase 32 129 3.0E-12 T 11-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 AMC99_00242 61d045c1ab7a63805d5a615398ca2b93 518 Pfam PF03109 ABC1 family 112 228 6.2E-31 T 11-10-2018 IPR004147 UbiB domain AMC99_00242 61d045c1ab7a63805d5a615398ca2b93 518 SUPERFAMILY SSF56112 93 430 5.05E-35 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMC99_00242 61d045c1ab7a63805d5a615398ca2b93 518 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 9 439 4.8E-157 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 SUPERFAMILY SSF52540 68 288 2.28E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01162 55dee246e04c99e843924c6c89af008c 455 Hamap MF_01498 DNA repair protein RadA [radA]. 21 452 41.877 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 431 1.2E-162 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 Gene3D G3DSA:3.40.50.300 69 278 4.7E-40 T 11-10-2018 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 Pfam PF13481 AAA domain 81 220 3.0E-14 T 11-10-2018 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 SMART SM00382 87 242 8.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01162 55dee246e04c99e843924c6c89af008c 455 Gene3D G3DSA:3.30.230.10 304 432 2.0E-11 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_01162 55dee246e04c99e843924c6c89af008c 455 SUPERFAMILY SSF54211 253 431 1.44E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_01162 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 10 34 2.2E-88 T 11-10-2018 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 172 196 2.2E-88 T 11-10-2018 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 246 272 2.2E-88 T 11-10-2018 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 321 344 2.2E-88 T 11-10-2018 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 79 107 2.2E-88 T 11-10-2018 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 121 138 2.2E-88 T 11-10-2018 AMC99_01162 55dee246e04c99e843924c6c89af008c 455 PRINTS PR01874 DNA repair protein radA signature 211 239 2.2E-88 T 11-10-2018 AMC99_01427 fdde8eeda752e4e5d62e316f8921b77e 189 Pfam PF00430 ATP synthase B/B' CF(0) 38 169 3.0E-19 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMC99_01427 fdde8eeda752e4e5d62e316f8921b77e 189 Hamap MF_01398 ATP synthase subunit b [atpF]. 34 171 11.683 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMC99_01964 369b2c375637f286783da0446893e38d 380 Gene3D G3DSA:3.30.2350.10 85 301 2.9E-63 T 11-10-2018 AMC99_01964 369b2c375637f286783da0446893e38d 380 Gene3D G3DSA:3.10.290.10 5 71 7.5E-12 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMC99_01964 369b2c375637f286783da0446893e38d 380 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 311 4.6E-59 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01964 369b2c375637f286783da0446893e38d 380 Pfam PF00849 RNA pseudouridylate synthase 103 252 3.1E-36 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01964 369b2c375637f286783da0446893e38d 380 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01964 369b2c375637f286783da0446893e38d 380 SUPERFAMILY SSF55174 16 66 2.32E-5 T 11-10-2018 AMC99_01964 369b2c375637f286783da0446893e38d 380 SUPERFAMILY SSF55120 94 318 3.2E-60 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_00087 03772d8ba20493062980a7cda188e6f8 338 Gene3D G3DSA:1.20.1600.10 3 337 4.6E-44 T 11-10-2018 AMC99_00087 03772d8ba20493062980a7cda188e6f8 338 Pfam PF02321 Outer membrane efflux protein 12 141 1.5E-13 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_00087 03772d8ba20493062980a7cda188e6f8 338 Pfam PF02321 Outer membrane efflux protein 167 333 1.4E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_00087 03772d8ba20493062980a7cda188e6f8 338 SUPERFAMILY SSF56954 3 333 3.79E-51 T 11-10-2018 AMC99_01358 176a58ca45fc448b93f0f7885f9d8310 302 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 45 298 3.3E-47 T 11-10-2018 AMC99_01358 176a58ca45fc448b93f0f7885f9d8310 302 Gene3D G3DSA:3.40.50.150 95 301 6.4E-40 T 11-10-2018 AMC99_01358 176a58ca45fc448b93f0f7885f9d8310 302 PIRSF PIRSF000401 52 300 1.2E-45 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMC99_01358 176a58ca45fc448b93f0f7885f9d8310 302 SUPERFAMILY SSF53335 42 298 1.53E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02108 cf7939ee3bad4f04abbf3dd8aa936941 284 Pfam PF11231 Protein of unknown function (DUF3034) 29 281 1.3E-92 T 11-10-2018 IPR021393 Protein of unknown function DUF3034 AMC99_02573 b422b0e10e1597f50706d7b82e394266 193 Gene3D G3DSA:2.160.10.10 9 191 6.5E-51 T 11-10-2018 AMC99_02573 b422b0e10e1597f50706d7b82e394266 193 SUPERFAMILY SSF51161 13 184 4.85E-40 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AMC99_02573 b422b0e10e1597f50706d7b82e394266 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 19 51 4.8E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AMC99_02048 7da099009ba10b650ffec92b0862a9bf 289 SUPERFAMILY SSF56281 14 280 1.16E-54 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_02048 7da099009ba10b650ffec92b0862a9bf 289 Pfam PF00753 Metallo-beta-lactamase superfamily 35 207 1.0E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_02048 7da099009ba10b650ffec92b0862a9bf 289 Gene3D G3DSA:3.60.15.10 11 212 2.5E-52 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_02048 7da099009ba10b650ffec92b0862a9bf 289 Gene3D G3DSA:1.10.10.10 214 288 5.3E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02048 7da099009ba10b650ffec92b0862a9bf 289 SMART SM00849 35 207 2.0E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_00127 f96ecf215b9da27ad3996c48632474a7 231 SUPERFAMILY SSF46785 150 221 6.05E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00127 f96ecf215b9da27ad3996c48632474a7 231 Gene3D G3DSA:2.60.120.10 4 131 2.1E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_00127 f96ecf215b9da27ad3996c48632474a7 231 Pfam PF13545 Crp-like helix-turn-helix domain 151 218 5.7E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_00127 f96ecf215b9da27ad3996c48632474a7 231 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 2.1E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_00127 f96ecf215b9da27ad3996c48632474a7 231 SUPERFAMILY SSF51206 9 144 9.3E-21 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMC99_00127 f96ecf215b9da27ad3996c48632474a7 231 Gene3D G3DSA:1.10.10.10 136 229 8.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00127 f96ecf215b9da27ad3996c48632474a7 231 SMART SM00100 14 131 2.5E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 SUPERFAMILY SSF52540 284 481 6.83E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Pfam PF00005 ABC transporter 28 153 1.3E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 SMART SM00382 36 198 7.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 SMART SM00382 313 483 2.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Gene3D G3DSA:1.10.287.380 521 601 1.2E-17 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Pfam PF16326 ABC transporter C-terminal domain 528 597 2.5E-19 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Gene3D G3DSA:3.40.50.300 252 518 3.5E-63 T 11-10-2018 AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Gene3D G3DSA:3.40.50.300 26 101 5.3E-11 T 11-10-2018 AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Gene3D G3DSA:3.40.50.300 102 247 3.1E-31 T 11-10-2018 AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 SUPERFAMILY SSF52540 25 199 8.0E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00659 97ed359b27dbe7b11fd2cbc4ca53ac2a 601 Pfam PF00005 ABC transporter 305 438 8.7E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_02703 8118aea96a65c9ea64a57d1ccdc9bcd4 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 5.9E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_02703 8118aea96a65c9ea64a57d1ccdc9bcd4 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 5.9E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_02703 8118aea96a65c9ea64a57d1ccdc9bcd4 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 5.9E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_02703 8118aea96a65c9ea64a57d1ccdc9bcd4 289 Pfam PF00561 alpha/beta hydrolase fold 29 276 1.5E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_02703 8118aea96a65c9ea64a57d1ccdc9bcd4 289 Gene3D G3DSA:3.40.50.1820 7 289 4.0E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02703 8118aea96a65c9ea64a57d1ccdc9bcd4 289 SUPERFAMILY SSF53474 4 289 3.75E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02243 69263cce084c2051709f7b9f410c5a06 223 SUPERFAMILY SSF52833 1 104 4.49E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02243 69263cce084c2051709f7b9f410c5a06 223 Gene3D G3DSA:3.40.30.10 4 222 3.9E-74 T 11-10-2018 AMC99_02243 69263cce084c2051709f7b9f410c5a06 223 Gene3D G3DSA:1.20.1050.10 80 198 3.9E-74 T 11-10-2018 AMC99_02243 69263cce084c2051709f7b9f410c5a06 223 SUPERFAMILY SSF47616 85 220 1.85E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_02243 69263cce084c2051709f7b9f410c5a06 223 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 1.6E-18 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_02154 10f3c3231756c934fcba628335d7e9a0 156 SUPERFAMILY SSF46785 12 150 1.08E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02154 10f3c3231756c934fcba628335d7e9a0 156 Gene3D G3DSA:1.10.10.10 1 154 5.9E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02154 10f3c3231756c934fcba628335d7e9a0 156 SMART SM00347 34 134 6.8E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_02154 10f3c3231756c934fcba628335d7e9a0 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_02154 10f3c3231756c934fcba628335d7e9a0 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 1.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_02154 10f3c3231756c934fcba628335d7e9a0 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 1.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_02154 10f3c3231756c934fcba628335d7e9a0 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_02154 10f3c3231756c934fcba628335d7e9a0 156 Pfam PF12802 MarR family 40 98 8.3E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_01034 79fcab902099d0e6c5e7f20b8e14c143 175 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 16 109 2.1E-11 T 11-10-2018 IPR032871 AHH domain-containing protein AMC99_01315 cf9c64ba41b1971353e72b45204eda2d 571 SUPERFAMILY SSF53955 397 543 4.22E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMC99_01315 cf9c64ba41b1971353e72b45204eda2d 571 Gene3D G3DSA:1.10.530.10 394 546 3.2E-34 T 11-10-2018 AMC99_01315 cf9c64ba41b1971353e72b45204eda2d 571 Pfam PF01464 Transglycosylase SLT domain 398 504 1.2E-19 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AMC99_01315 cf9c64ba41b1971353e72b45204eda2d 571 SUPERFAMILY SSF48435 37 374 5.49E-19 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AMC99_01598 785d39aacc6bed07855715be41f82229 328 SUPERFAMILY SSF53335 41 210 4.06E-6 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01598 785d39aacc6bed07855715be41f82229 328 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 21 320 6.7E-98 T 11-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent AMC99_01598 785d39aacc6bed07855715be41f82229 328 Gene3D G3DSA:3.40.50.150 48 220 4.9E-45 T 11-10-2018 AMC99_01598 785d39aacc6bed07855715be41f82229 328 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 21 318 3.4E-109 T 11-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 AMC99_01598 785d39aacc6bed07855715be41f82229 328 PIRSF PIRSF018005 3 322 7.9E-105 T 11-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 Pfam PF05193 Peptidase M16 inactive domain 210 387 3.8E-29 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 Pfam PF05193 Peptidase M16 inactive domain 672 843 4.0E-28 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 Gene3D G3DSA:3.30.830.10 509 716 6.2E-46 T 11-10-2018 AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 SUPERFAMILY SSF63411 275 453 4.62E-32 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 SUPERFAMILY SSF63411 41 254 1.66E-53 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 Gene3D G3DSA:3.30.830.10 39 260 8.4E-62 T 11-10-2018 AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 Pfam PF00675 Insulinase (Peptidase family M16) 55 170 5.8E-16 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 Pfam PF00675 Insulinase (Peptidase family M16) 519 628 1.3E-11 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 Gene3D G3DSA:3.30.830.10 264 460 1.3E-43 T 11-10-2018 AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 Gene3D G3DSA:3.30.830.10 726 921 5.9E-42 T 11-10-2018 AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 SUPERFAMILY SSF63411 732 930 4.62E-37 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_02125 ddb6b544f31e4e71882815d35fb3c6f5 951 SUPERFAMILY SSF63411 507 710 2.57E-45 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMC99_00682 727e7df8bdf626b1b4ac5512d56f2c9d 277 Pfam PF01066 CDP-alcohol phosphatidyltransferase 33 97 4.7E-14 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_00682 727e7df8bdf626b1b4ac5512d56f2c9d 277 Gene3D G3DSA:1.20.120.1760 23 163 6.1E-17 T 11-10-2018 AMC99_00682 727e7df8bdf626b1b4ac5512d56f2c9d 277 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 75 97 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_00682 727e7df8bdf626b1b4ac5512d56f2c9d 277 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 40 204 9.9E-32 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AMC99_00682 727e7df8bdf626b1b4ac5512d56f2c9d 277 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 220 254 2.7E-5 T 11-10-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal AMC99_02747 196fc49d787fef6c6020f0dcd15811dd 138 Pfam PF13430 Domain of unknown function (DUF4112) 25 126 3.9E-34 T 11-10-2018 IPR025187 Protein of unknown function DUF4112 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 ProSitePatterns PS00194 Thioredoxin family active site. 55 73 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 PIRSF PIRSF000077 35 138 4.6E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 Gene3D G3DSA:3.40.30.10 37 139 2.4E-28 T 11-10-2018 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 137 2.7E-30 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 PRINTS PR00421 Thioredoxin family signature 62 71 2.6E-8 T 11-10-2018 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 PRINTS PR00421 Thioredoxin family signature 54 62 2.6E-8 T 11-10-2018 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 PRINTS PR00421 Thioredoxin family signature 102 113 2.6E-8 T 11-10-2018 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 Gene3D G3DSA:2.20.28.140 1 32 5.6E-14 T 11-10-2018 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 Pfam PF00085 Thioredoxin 40 135 6.0E-27 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AMC99_00763 97ede361f343b3b83578db1f278f75f6 140 SUPERFAMILY SSF52833 23 139 6.89E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02290 050698d8546fb1083220093a3d2f04c1 157 SUPERFAMILY SSF74653 28 126 1.83E-13 T 11-10-2018 AMC99_02290 050698d8546fb1083220093a3d2f04c1 157 Gene3D G3DSA:3.30.1150.10 7 125 2.1E-12 T 11-10-2018 AMC99_02290 050698d8546fb1083220093a3d2f04c1 157 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 59 122 1.5E-8 T 11-10-2018 IPR006260 TonB/TolA, C-terminal AMC99_02290 050698d8546fb1083220093a3d2f04c1 157 Pfam PF13103 TonB C terminal 34 117 5.6E-7 T 11-10-2018 AMC99_01814 f95158644870ba9a4c90f443658808bb 109 Gene3D G3DSA:3.30.310.50 3 107 4.0E-31 T 11-10-2018 AMC99_01814 f95158644870ba9a4c90f443658808bb 109 PIRSF PIRSF028291 1 108 1.2E-24 T 11-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 AMC99_01814 f95158644870ba9a4c90f443658808bb 109 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 7 103 1.0E-31 T 11-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 AMC99_00183 2f5c5fb806909616b1bf1c3bad009763 383 SUPERFAMILY SSF53756 3 372 4.4E-129 T 11-10-2018 AMC99_00183 2f5c5fb806909616b1bf1c3bad009763 383 Gene3D G3DSA:3.40.50.2000 190 357 4.4E-140 T 11-10-2018 AMC99_00183 2f5c5fb806909616b1bf1c3bad009763 383 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 370 9.3E-119 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 AMC99_00183 2f5c5fb806909616b1bf1c3bad009763 383 Gene3D G3DSA:3.40.50.2000 5 367 4.4E-140 T 11-10-2018 AMC99_00183 2f5c5fb806909616b1bf1c3bad009763 383 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 372 3.0E-140 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 AMC99_00888 e6300d2267790fddd867734d3873361e 148 SUPERFAMILY SSF161084 5 134 6.08E-17 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMC99_00888 e6300d2267790fddd867734d3873361e 148 Pfam PF01124 MAPEG family 6 136 1.8E-22 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMC99_00888 e6300d2267790fddd867734d3873361e 148 Gene3D G3DSA:1.20.120.550 3 141 6.4E-11 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMC99_00519 c5b823d4a38d5675cfc2be3320553061 191 Pfam PF02545 Maf-like protein 6 185 2.9E-49 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMC99_00519 c5b823d4a38d5675cfc2be3320553061 191 Hamap MF_00528 Septum formation protein Maf [maf]. 5 190 31.468 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMC99_00519 c5b823d4a38d5675cfc2be3320553061 191 PIRSF PIRSF006305 1 190 4.8E-47 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMC99_00519 c5b823d4a38d5675cfc2be3320553061 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 184 6.6E-45 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AMC99_00519 c5b823d4a38d5675cfc2be3320553061 191 Gene3D G3DSA:3.90.950.10 4 190 1.5E-57 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_00519 c5b823d4a38d5675cfc2be3320553061 191 SUPERFAMILY SSF52972 4 184 2.94E-54 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AMC99_00358 1796eaecda29da98370a23e5edb2bd99 248 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 7 231 1.2E-96 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMC99_00358 1796eaecda29da98370a23e5edb2bd99 248 SUPERFAMILY SSF46626 17 227 2.98E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_00358 1796eaecda29da98370a23e5edb2bd99 248 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 8 234 3.6E-109 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO AMC99_00358 1796eaecda29da98370a23e5edb2bd99 248 Gene3D G3DSA:1.10.760.10 44 235 2.8E-66 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_02690 08cd4505b59591782ebf492b9d34a969 319 SMART SM00342 197 281 1.9E-4 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_02690 08cd4505b59591782ebf492b9d34a969 319 Pfam PF12833 Helix-turn-helix domain 205 283 1.1E-11 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_02690 08cd4505b59591782ebf492b9d34a969 319 Gene3D G3DSA:1.10.10.60 188 286 2.2E-13 T 11-10-2018 AMC99_00922 df396480c42a411006e0096a28ceff66 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 81 4.6E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_00922 df396480c42a411006e0096a28ceff66 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 199 9.0E-12 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AMC99_00922 df396480c42a411006e0096a28ceff66 203 SUPERFAMILY SSF47616 79 202 1.1E-24 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_00922 df396480c42a411006e0096a28ceff66 203 Gene3D G3DSA:1.20.1050.10 83 198 1.1E-64 T 11-10-2018 AMC99_00922 df396480c42a411006e0096a28ceff66 203 SUPERFAMILY SSF52833 9 88 2.66E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00922 df396480c42a411006e0096a28ceff66 203 Gene3D G3DSA:3.40.30.10 10 201 1.1E-64 T 11-10-2018 AMC99_00222 298efb382b307f85c4089c99f8adbe52 221 Pfam PF01926 50S ribosome-binding GTPase 43 163 1.6E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AMC99_00222 298efb382b307f85c4089c99f8adbe52 221 Gene3D G3DSA:3.40.50.300 18 216 9.8E-55 T 11-10-2018 AMC99_00222 298efb382b307f85c4089c99f8adbe52 221 SUPERFAMILY SSF52540 24 213 7.92E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00222 298efb382b307f85c4089c99f8adbe52 221 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 25 211 9.2E-68 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AMC99_00222 298efb382b307f85c4089c99f8adbe52 221 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 29 215 27.925 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AMC99_00222 298efb382b307f85c4089c99f8adbe52 221 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 43 187 5.6E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AMC99_00694 089c218daa4ede427e682a29eb351601 154 Pfam PF07977 FabA-like domain 19 143 3.3E-34 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMC99_00694 089c218daa4ede427e682a29eb351601 154 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 151 32.601 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMC99_00694 089c218daa4ede427e682a29eb351601 154 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 11 149 3.8E-55 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMC99_00694 089c218daa4ede427e682a29eb351601 154 SUPERFAMILY SSF54637 10 152 4.37E-45 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00694 089c218daa4ede427e682a29eb351601 154 Gene3D G3DSA:3.10.129.10 1 153 7.7E-57 T 11-10-2018 AMC99_02719 f34099e45feebb562b4a44a9bac59ce3 296 Pfam PF01430 Hsp33 protein 10 292 8.1E-71 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMC99_02719 f34099e45feebb562b4a44a9bac59ce3 296 SUPERFAMILY SSF118352 248 295 3.4E-11 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMC99_02719 f34099e45feebb562b4a44a9bac59ce3 296 Gene3D G3DSA:1.10.287.480 198 242 2.5E-9 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AMC99_02719 f34099e45feebb562b4a44a9bac59ce3 296 Gene3D G3DSA:3.90.1280.10 248 296 5.3E-9 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMC99_02719 f34099e45feebb562b4a44a9bac59ce3 296 SUPERFAMILY SSF64397 12 257 6.54E-61 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMC99_02719 f34099e45feebb562b4a44a9bac59ce3 296 Gene3D G3DSA:3.55.30.10 5 186 8.5E-55 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMC99_02719 f34099e45feebb562b4a44a9bac59ce3 296 PIRSF PIRSF005261 1 296 1.3E-68 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMC99_00496 c0263fef2dea72490f1523e70aa75378 333 Pfam PF00326 Prolyl oligopeptidase family 249 309 7.2E-8 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_00496 c0263fef2dea72490f1523e70aa75378 333 SUPERFAMILY SSF53474 87 329 4.19E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00496 c0263fef2dea72490f1523e70aa75378 333 Gene3D G3DSA:3.40.50.1820 79 332 2.1E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00089 706363fd2bd39ddf88e884c974351306 134 Gene3D G3DSA:1.10.1660.10 1 125 1.2E-36 T 11-10-2018 AMC99_00089 706363fd2bd39ddf88e884c974351306 134 Pfam PF13411 MerR HTH family regulatory protein 1 67 2.1E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00089 706363fd2bd39ddf88e884c974351306 134 SMART SM00422 1 70 4.1E-30 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00089 706363fd2bd39ddf88e884c974351306 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.8E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00089 706363fd2bd39ddf88e884c974351306 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.8E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00089 706363fd2bd39ddf88e884c974351306 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.8E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AMC99_00089 706363fd2bd39ddf88e884c974351306 134 SUPERFAMILY SSF46955 1 126 1.47E-36 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMC99_02519 18b7a1568d6d38facd200e70252f0fea 284 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 122 1.3E-11 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMC99_02519 18b7a1568d6d38facd200e70252f0fea 284 SUPERFAMILY SSF111331 7 274 3.05E-17 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMC99_02519 18b7a1568d6d38facd200e70252f0fea 284 Gene3D G3DSA:3.40.50.10330 2 126 3.2E-11 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMC99_00514 a72408b43ef49a7c147f45ae4098837d 465 SUPERFAMILY SSF56935 110 465 4.03E-28 T 11-10-2018 AMC99_00514 a72408b43ef49a7c147f45ae4098837d 465 Pfam PF02530 Porin subfamily 162 447 1.2E-10 T 11-10-2018 IPR003684 Porin, alpha proteobacteria type GO:0015288|GO:0016020|GO:0055085 AMC99_01568 57a95c63ef9a8ce64c3a03015f2d6e80 393 Gene3D G3DSA:3.40.50.2300 48 134 2.7E-7 T 11-10-2018 AMC99_01568 57a95c63ef9a8ce64c3a03015f2d6e80 393 Gene3D G3DSA:3.40.50.300 147 388 4.3E-47 T 11-10-2018 AMC99_01568 57a95c63ef9a8ce64c3a03015f2d6e80 393 Pfam PF13614 AAA domain 148 289 3.0E-8 T 11-10-2018 IPR025669 AAA domain AMC99_01568 57a95c63ef9a8ce64c3a03015f2d6e80 393 SUPERFAMILY SSF52172 46 134 1.46E-8 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01568 57a95c63ef9a8ce64c3a03015f2d6e80 393 SUPERFAMILY SSF52540 148 389 9.27E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01847 f67aed58f7742c9420bbf083b95de120 308 SUPERFAMILY SSF51735 7 307 1.37E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01847 f67aed58f7742c9420bbf083b95de120 308 Pfam PF13460 NAD(P)H-binding 11 160 1.2E-22 T 11-10-2018 IPR016040 NAD(P)-binding domain AMC99_01847 f67aed58f7742c9420bbf083b95de120 308 Gene3D G3DSA:3.40.50.720 2 308 1.1E-54 T 11-10-2018 AMC99_02572 fb52e7205f8daa5c4e623f22eef7f100 185 Gene3D G3DSA:3.40.630.30 3 181 7.4E-40 T 11-10-2018 AMC99_02572 fb52e7205f8daa5c4e623f22eef7f100 185 SUPERFAMILY SSF55729 2 153 1.01E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02572 fb52e7205f8daa5c4e623f22eef7f100 185 Pfam PF13302 Acetyltransferase (GNAT) domain 10 152 1.7E-25 T 11-10-2018 IPR000182 GNAT domain AMC99_01380 c91e71f1a0b8ad062551fc893b80277b 337 Pfam PF00107 Zinc-binding dehydrogenase 171 290 6.4E-28 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_01380 c91e71f1a0b8ad062551fc893b80277b 337 SUPERFAMILY SSF50129 10 166 8.99E-31 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_01380 c91e71f1a0b8ad062551fc893b80277b 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 89 6.1E-6 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_01380 c91e71f1a0b8ad062551fc893b80277b 337 Gene3D G3DSA:3.40.50.720 142 284 1.3E-92 T 11-10-2018 AMC99_01380 c91e71f1a0b8ad062551fc893b80277b 337 SUPERFAMILY SSF51735 137 308 5.92E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01380 c91e71f1a0b8ad062551fc893b80277b 337 Gene3D G3DSA:3.90.180.10 26 325 1.3E-92 T 11-10-2018 AMC99_01380 c91e71f1a0b8ad062551fc893b80277b 337 SMART SM00829 11 334 4.6E-20 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_00128 3b79397e96499ce27dc20470cba07751 915 Gene3D G3DSA:1.20.1250.20 672 893 2.6E-66 T 11-10-2018 AMC99_00128 3b79397e96499ce27dc20470cba07751 915 TIGRFAM TIGR00886 2A0108: nitrite transporter 470 846 3.7E-97 T 11-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 AMC99_00128 3b79397e96499ce27dc20470cba07751 915 Gene3D G3DSA:1.20.1250.20 436 671 2.1E-78 T 11-10-2018 AMC99_00128 3b79397e96499ce27dc20470cba07751 915 Gene3D G3DSA:1.20.1250.20 3 189 4.3E-43 T 11-10-2018 AMC99_00128 3b79397e96499ce27dc20470cba07751 915 SUPERFAMILY SSF103473 10 414 4.05E-62 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00128 3b79397e96499ce27dc20470cba07751 915 Gene3D G3DSA:1.20.1250.20 207 420 9.5E-57 T 11-10-2018 AMC99_00128 3b79397e96499ce27dc20470cba07751 915 Pfam PF07690 Major Facilitator Superfamily 479 850 5.4E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_00128 3b79397e96499ce27dc20470cba07751 915 Pfam PF07690 Major Facilitator Superfamily 22 307 1.1E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_00128 3b79397e96499ce27dc20470cba07751 915 SUPERFAMILY SSF103473 469 888 5.23E-33 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_02452 658185289ba7d727ac708ea989849e9d 795 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 422 623 1.7E-28 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 AMC99_02452 658185289ba7d727ac708ea989849e9d 795 SUPERFAMILY SSF52279 422 623 1.09E-38 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMC99_02452 658185289ba7d727ac708ea989849e9d 795 SUPERFAMILY SSF51445 38 420 5.79E-109 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMC99_02452 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 136 9.8E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_02452 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 231 247 9.8E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_02452 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 301 319 9.8E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_02452 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 144 163 9.8E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_02452 658185289ba7d727ac708ea989849e9d 795 PRINTS PR00133 Glycosyl hydrolase family 3 signature 190 206 9.8E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_02452 658185289ba7d727ac708ea989849e9d 795 Gene3D G3DSA:3.40.50.1700 407 628 3.2E-59 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 AMC99_02452 658185289ba7d727ac708ea989849e9d 795 Gene3D G3DSA:3.20.20.300 39 396 1.2E-129 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMC99_02452 658185289ba7d727ac708ea989849e9d 795 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 54 378 3.3E-85 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_00334 924dcd8d892706dff6dbbdfb8c8404a2 349 SUPERFAMILY SSF82282 6 348 9.16E-97 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMC99_00334 924dcd8d892706dff6dbbdfb8c8404a2 349 Gene3D G3DSA:3.20.20.330 1 334 1.3E-114 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 AMC99_00334 924dcd8d892706dff6dbbdfb8c8404a2 349 Pfam PF02574 Homocysteine S-methyltransferase 16 321 2.9E-73 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 AMC99_02478 3936ef1c1decc6fcd47f61928b392391 95 Gene3D G3DSA:2.30.170.40 2 77 1.8E-27 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02478 3936ef1c1decc6fcd47f61928b392391 95 SUPERFAMILY SSF143800 1 82 4.71E-27 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02478 3936ef1c1decc6fcd47f61928b392391 95 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.3E-23 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_02478 3936ef1c1decc6fcd47f61928b392391 95 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 19.058 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_02478 3936ef1c1decc6fcd47f61928b392391 95 Pfam PF00830 Ribosomal L28 family 3 61 8.7E-25 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_02179 94b5ce0cd18ee1ed4e667e4d1998a4cf 481 Pfam PF00743 Flavin-binding monooxygenase-like 62 201 2.7E-14 T 11-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 AMC99_02179 94b5ce0cd18ee1ed4e667e4d1998a4cf 481 Gene3D G3DSA:3.50.50.60 297 436 2.5E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02179 94b5ce0cd18ee1ed4e667e4d1998a4cf 481 Gene3D G3DSA:3.50.50.60 1 139 4.5E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02179 94b5ce0cd18ee1ed4e667e4d1998a4cf 481 SUPERFAMILY SSF51905 8 372 5.68E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02179 94b5ce0cd18ee1ed4e667e4d1998a4cf 481 Gene3D G3DSA:3.50.50.60 140 240 3.0E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00374 e397420bcf10f2a778d832f880814007 255 SUPERFAMILY SSF53474 29 223 1.82E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00374 e397420bcf10f2a778d832f880814007 255 Gene3D G3DSA:3.40.50.1820 22 234 5.6E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00374 e397420bcf10f2a778d832f880814007 255 Pfam PF10503 Esterase PHB depolymerase 34 219 2.8E-11 T 11-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 AMC99_02798 75af927f59b9f2a024452c4b2eba60ed 171 Gene3D G3DSA:3.30.70.1730 1 131 2.8E-38 T 11-10-2018 AMC99_02798 75af927f59b9f2a024452c4b2eba60ed 171 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 25.611 T 11-10-2018 IPR022973 Ribosomal protein L10 AMC99_02798 75af927f59b9f2a024452c4b2eba60ed 171 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_02798 75af927f59b9f2a024452c4b2eba60ed 171 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 22 140 0.003 T 11-10-2018 AMC99_02798 75af927f59b9f2a024452c4b2eba60ed 171 SUPERFAMILY SSF160369 1 166 1.7E-54 T 11-10-2018 AMC99_02798 75af927f59b9f2a024452c4b2eba60ed 171 Pfam PF00466 Ribosomal protein L10 2 98 4.0E-24 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AMC99_01901 317fbb9846885d1c9dc2b417274ee27d 1396 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1051 1382 6.4E-51 T 11-10-2018 IPR007452 Translocation and assembly module TamB AMC99_01466 b315127cb6b02b84b487862efd9aa5f7 274 Pfam PF13847 Methyltransferase domain 42 127 5.1E-11 T 11-10-2018 IPR025714 Methyltransferase domain AMC99_01466 b315127cb6b02b84b487862efd9aa5f7 274 Gene3D G3DSA:3.40.50.150 27 273 3.2E-29 T 11-10-2018 AMC99_01466 b315127cb6b02b84b487862efd9aa5f7 274 SUPERFAMILY SSF53335 19 206 1.4E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00014 519dbfb295bbeb828bf81f7a32f3c0c4 111 Gene3D G3DSA:1.10.10.10 12 111 1.8E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00014 519dbfb295bbeb828bf81f7a32f3c0c4 111 SUPERFAMILY SSF46785 29 101 8.92E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02590 bdd453f2b2697c0fe34de11ebfeb6b20 136 Pfam PF02590 Predicted SPOUT methyltransferase 1 133 1.9E-31 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMC99_02590 bdd453f2b2697c0fe34de11ebfeb6b20 136 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 2 134 21.593 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMC99_02590 bdd453f2b2697c0fe34de11ebfeb6b20 136 Gene3D G3DSA:3.40.1280.10 1 134 8.4E-35 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMC99_02590 bdd453f2b2697c0fe34de11ebfeb6b20 136 SUPERFAMILY SSF75217 1 132 4.19E-36 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AMC99_02590 bdd453f2b2697c0fe34de11ebfeb6b20 136 PIRSF PIRSF004505 1 45 2.0 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMC99_02590 bdd453f2b2697c0fe34de11ebfeb6b20 136 PIRSF PIRSF004505 38 134 2.3E-31 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 AMC99_01140 79d581ddb653c3f24e594a7890e3b590 550 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 61 1.2E-9 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_01140 79d581ddb653c3f24e594a7890e3b590 550 Pfam PF09977 Putative Tad-like Flp pilus-assembly 89 148 1.1E-5 T 11-10-2018 IPR018705 Domain of unknown function DUF2134, membrane AMC99_00062 50b5b0d5730a03bef0f3bdc19fee64e3 119 Gene3D G3DSA:1.10.260.40 13 84 1.2E-20 T 11-10-2018 AMC99_00062 50b5b0d5730a03bef0f3bdc19fee64e3 119 SUPERFAMILY SSF47413 17 76 1.91E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_00062 50b5b0d5730a03bef0f3bdc19fee64e3 119 SMART SM00530 22 76 2.5E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_00062 50b5b0d5730a03bef0f3bdc19fee64e3 119 Pfam PF01381 Helix-turn-helix 23 71 4.9E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_02220 50dbfefbde5775a325d567e8a4dee6fd 533 Gene3D G3DSA:3.50.50.60 183 336 7.9E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02220 50dbfefbde5775a325d567e8a4dee6fd 533 Gene3D G3DSA:3.50.50.60 5 80 5.1E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02220 50dbfefbde5775a325d567e8a4dee6fd 533 SUPERFAMILY SSF51905 1 407 6.17E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02220 50dbfefbde5775a325d567e8a4dee6fd 533 Pfam PF01593 Flavin containing amine oxidoreductase 16 326 1.5E-14 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 AMC99_01942 c2c35efdf486ea881ecafdb6866a8bfe 482 SUPERFAMILY SSF52540 4 254 6.68E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01942 c2c35efdf486ea881ecafdb6866a8bfe 482 SMART SM00382 24 214 0.0017 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01942 c2c35efdf486ea881ecafdb6866a8bfe 482 Gene3D G3DSA:3.40.50.300 25 251 3.8E-37 T 11-10-2018 AMC99_01942 c2c35efdf486ea881ecafdb6866a8bfe 482 Pfam PF01935 Domain of unknown function DUF87 6 70 3.1E-9 T 11-10-2018 IPR002789 Helicase HerA, central domain AMC99_01942 c2c35efdf486ea881ecafdb6866a8bfe 482 PIRSF PIRSF034081 1 482 6.4E-180 T 11-10-2018 IPR014588 ATPase, Atu1862 type, predicted AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 Pfam PF13424 Tetratricopeptide repeat 115 180 8.1E-11 T 11-10-2018 AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 SMART SM00028 277 310 230.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 SMART SM00028 151 184 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 SMART SM00028 193 226 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 SMART SM00028 235 268 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 SUPERFAMILY SSF48452 189 337 3.41E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 SUPERFAMILY SSF48452 113 226 2.03E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 Gene3D G3DSA:1.25.40.10 3 175 4.2E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 Gene3D G3DSA:1.25.40.10 176 407 6.2E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00114 354a1daa4f6ba3dd6ab68fd01a299fba 909 Pfam PF12770 CHAT domain 599 907 2.7E-39 T 11-10-2018 IPR024983 CHAT domain AMC99_02645 12b32bf9bfa49eadaab521a4da0405c9 176 Pfam PF01252 Signal peptidase (SPase) II 16 158 2.4E-33 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMC99_02645 12b32bf9bfa49eadaab521a4da0405c9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 9.3E-16 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMC99_02645 12b32bf9bfa49eadaab521a4da0405c9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 9.3E-16 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMC99_02645 12b32bf9bfa49eadaab521a4da0405c9 176 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 55 63 9.3E-16 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMC99_02645 12b32bf9bfa49eadaab521a4da0405c9 176 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 15.381 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMC99_02645 12b32bf9bfa49eadaab521a4da0405c9 176 TIGRFAM TIGR00077 lspA: signal peptidase II 14 163 1.4E-31 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AMC99_02084 6167203db6196288bf731f919281ee9a 213 SUPERFAMILY SSF46689 26 96 1.2E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_02084 6167203db6196288bf731f919281ee9a 213 Gene3D G3DSA:1.10.357.10 73 209 5.7E-30 T 11-10-2018 AMC99_02084 6167203db6196288bf731f919281ee9a 213 Gene3D G3DSA:1.10.10.60 26 72 4.2E-14 T 11-10-2018 AMC99_02084 6167203db6196288bf731f919281ee9a 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 2.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_02084 6167203db6196288bf731f919281ee9a 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 75 2.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_02084 6167203db6196288bf731f919281ee9a 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 77 1.5E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_02084 6167203db6196288bf731f919281ee9a 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 43 74 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMC99_02084 6167203db6196288bf731f919281ee9a 213 SUPERFAMILY SSF48498 101 207 5.5E-17 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMC99_02473 167dd803ccf8bd61cf17f524feb4a3b3 265 Gene3D G3DSA:3.40.50.2300 1 135 1.6E-31 T 11-10-2018 AMC99_02473 167dd803ccf8bd61cf17f524feb4a3b3 265 SMART SM00850 168 265 9.7E-34 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_02473 167dd803ccf8bd61cf17f524feb4a3b3 265 Gene3D G3DSA:2.40.50.40 159 228 3.2E-13 T 11-10-2018 AMC99_02473 167dd803ccf8bd61cf17f524feb4a3b3 265 SUPERFAMILY SSF52172 4 120 5.69E-30 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02473 167dd803ccf8bd61cf17f524feb4a3b3 265 Pfam PF00072 Response regulator receiver domain 6 113 1.6E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02473 167dd803ccf8bd61cf17f524feb4a3b3 265 Pfam PF04397 LytTr DNA-binding domain 169 258 7.1E-24 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_02473 167dd803ccf8bd61cf17f524feb4a3b3 265 SMART SM00448 3 113 2.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01573 ff5b2bbecac366614a3f214c675c3eaf 161 Gene3D G3DSA:1.20.120.1220 8 118 1.7E-8 T 11-10-2018 AMC99_01573 ff5b2bbecac366614a3f214c675c3eaf 161 Pfam PF01478 Type IV leader peptidase family 9 109 8.0E-13 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMC99_02316 34c8ab745afe82d284532272bd86e312 535 SUPERFAMILY SSF52096 29 272 3.37E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02316 34c8ab745afe82d284532272bd86e312 535 SUPERFAMILY SSF52096 239 516 3.08E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02316 34c8ab745afe82d284532272bd86e312 535 Gene3D G3DSA:3.90.226.10 277 535 1.0E-97 T 11-10-2018 AMC99_02316 34c8ab745afe82d284532272bd86e312 535 Gene3D G3DSA:3.90.226.10 13 273 1.2E-95 T 11-10-2018 AMC99_02316 34c8ab745afe82d284532272bd86e312 535 Pfam PF01039 Carboxyl transferase domain 50 524 2.8E-149 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMC99_02524 95f2e6e19270d5b3cc8a80a8c524611f 195 Gene3D G3DSA:3.40.50.150 4 116 8.4E-20 T 11-10-2018 AMC99_02524 95f2e6e19270d5b3cc8a80a8c524611f 195 SUPERFAMILY SSF53335 7 156 5.12E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02524 95f2e6e19270d5b3cc8a80a8c524611f 195 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 11 104 5.9E-11 T 11-10-2018 AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 262 4.3E-53 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 SMART SM00138 5 269 7.0E-70 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.2E-28 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 1.2E-28 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 228 251 1.2E-28 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 209 223 1.2E-28 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 PRINTS PR00996 Glutamate methyltransferase family signature 141 157 1.2E-28 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 SUPERFAMILY SSF47757 2 70 1.02E-6 T 11-10-2018 AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 Gene3D G3DSA:3.40.50.150 73 269 7.7E-55 T 11-10-2018 AMC99_02071 e014cfbb00c75466cac67a046ece462c 281 SUPERFAMILY SSF53335 73 261 4.27E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00833 93758ca8f338d9925c4586c2092ddd39 125 SUPERFAMILY SSF54593 3 119 4.16E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00833 93758ca8f338d9925c4586c2092ddd39 125 Gene3D G3DSA:3.10.180.10 9 118 2.3E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00538 a98ca45fc48f0c44d8fb3a6aeb2bd3b5 365 PIRSF PIRSF012608 18 365 1.6E-79 T 11-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 AMC99_00538 a98ca45fc48f0c44d8fb3a6aeb2bd3b5 365 Pfam PF10094 Uncharacterized protein conserved in bacteria (DUF2332) 25 362 1.4E-94 T 11-10-2018 IPR011200 Uncharacterised conserved protein UCP012608 AMC99_01789 6d513ca4ac54464b5aac67a0f77cf364 304 Pfam PF02911 Formyl transferase, C-terminal domain 195 291 8.3E-23 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_01789 6d513ca4ac54464b5aac67a0f77cf364 304 Pfam PF00551 Formyl transferase 2 172 1.6E-41 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_01789 6d513ca4ac54464b5aac67a0f77cf364 304 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 127 150 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_01789 6d513ca4ac54464b5aac67a0f77cf364 304 Gene3D G3DSA:3.40.50.170 1 197 2.0E-73 T 11-10-2018 AMC99_01789 6d513ca4ac54464b5aac67a0f77cf364 304 Gene3D G3DSA:3.10.25.10 198 297 6.5E-23 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_01789 6d513ca4ac54464b5aac67a0f77cf364 304 SUPERFAMILY SSF53328 1 198 1.44E-60 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMC99_01789 6d513ca4ac54464b5aac67a0f77cf364 304 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 294 33.744 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AMC99_01789 6d513ca4ac54464b5aac67a0f77cf364 304 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 291 5.6E-84 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AMC99_01789 6d513ca4ac54464b5aac67a0f77cf364 304 SUPERFAMILY SSF50486 196 299 2.51E-26 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AMC99_00101 7f4146fa3ee338aa4c1a3bf75a598d45 209 SUPERFAMILY SSF103473 19 103 6.28E-5 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00101 7f4146fa3ee338aa4c1a3bf75a598d45 209 Pfam PF03713 Domain of unknown function (DUF305) 109 170 1.6E-9 T 11-10-2018 IPR005183 Domain of unknown function DUF305 AMC99_00101 7f4146fa3ee338aa4c1a3bf75a598d45 209 Gene3D G3DSA:1.20.1260.10 99 194 9.0E-10 T 11-10-2018 IPR012347 Ferritin-like AMC99_01017 302302741cef20dc8d50c48f5941c292 494 Pfam PF03167 Uracil DNA glycosylase superfamily 325 482 5.6E-35 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_01017 302302741cef20dc8d50c48f5941c292 494 SUPERFAMILY SSF52141 300 491 3.04E-52 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_01017 302302741cef20dc8d50c48f5941c292 494 Gene3D G3DSA:3.40.470.10 286 491 5.2E-56 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_01017 302302741cef20dc8d50c48f5941c292 494 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 24 268 1.1E-67 T 11-10-2018 IPR023875 DNA metabolism protein, putative AMC99_01017 302302741cef20dc8d50c48f5941c292 494 SMART SM00987 324 483 1.2E-36 T 11-10-2018 AMC99_01017 302302741cef20dc8d50c48f5941c292 494 SMART SM00986 324 483 1.2E-36 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AMC99_01017 302302741cef20dc8d50c48f5941c292 494 Pfam PF13566 Domain of unknown function (DUF4130 100 267 9.1E-42 T 11-10-2018 IPR025404 Domain of unknown function DUF4130 AMC99_01017 302302741cef20dc8d50c48f5941c292 494 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 270 485 7.4E-94 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 AMC99_00315 f82e682a9b2f8636fbd9db5ad0b00e3f 367 Gene3D G3DSA:3.40.630.30 3 367 1.5E-18 T 11-10-2018 AMC99_00315 f82e682a9b2f8636fbd9db5ad0b00e3f 367 SUPERFAMILY SSF55729 19 344 6.58E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01742 c459ed0eec257dc22354a48e8bff0d18 386 Pfam PF01966 HD domain 66 200 1.9E-15 T 11-10-2018 IPR006674 HD domain AMC99_01742 c459ed0eec257dc22354a48e8bff0d18 386 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 3 376 36.354 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 AMC99_01742 c459ed0eec257dc22354a48e8bff0d18 386 SMART SM00471 62 210 2.0E-12 T 11-10-2018 IPR003607 HD/PDEase domain AMC99_01742 c459ed0eec257dc22354a48e8bff0d18 386 SUPERFAMILY SSF109604 28 373 2.59E-84 T 11-10-2018 AMC99_01742 c459ed0eec257dc22354a48e8bff0d18 386 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 29 168 1.5E-62 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 AMC99_01742 c459ed0eec257dc22354a48e8bff0d18 386 Pfam PF13286 Phosphohydrolase-associated domain 287 371 4.8E-22 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain AMC99_01742 c459ed0eec257dc22354a48e8bff0d18 386 Gene3D G3DSA:1.10.3210.10 1 376 1.0E-122 T 11-10-2018 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 200 288 8.5E-23 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 SUPERFAMILY SSF52413 298 414 5.1E-26 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 SMART SM00984 315 415 7.0E-31 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 PIRSF PIRSF500136 1 421 1.9E-147 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Gene3D G3DSA:3.40.50.720 1 195 9.5E-60 T 11-10-2018 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 PIRSF PIRSF000124 4 420 1.5E-50 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 SUPERFAMILY SSF48179 199 290 1.67E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 SUPERFAMILY SSF51735 5 189 6.99E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 315 413 2.3E-18 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Gene3D G3DSA:3.40.50.720 198 420 7.9E-52 T 11-10-2018 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 178 4.9E-32 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 AMC99_02613 ec9f3e4cf5c2d0ee94f0d9db7cd016ed 422 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 408 5.7E-116 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 AMC99_02094 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 Gene3D G3DSA:3.40.50.720 157 289 2.8E-102 T 11-10-2018 AMC99_02094 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 SUPERFAMILY SSF50129 1 168 1.89E-51 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_02094 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 1.6E-27 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_02094 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 Gene3D G3DSA:3.90.180.10 14 332 2.8E-102 T 11-10-2018 AMC99_02094 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 AMC99_02094 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 Pfam PF00107 Zinc-binding dehydrogenase 179 304 6.8E-19 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_02094 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 SUPERFAMILY SSF51735 141 310 1.84E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02094 70fcc3e803f68c9516bb7dcf2e3b7c2e 346 SMART SM00829 8 343 0.0024 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_00324 04a2f7ba0c993dcc068cb2cbcf5fe7ee 192 SUPERFAMILY SSF46894 10 71 9.35E-7 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_00324 04a2f7ba0c993dcc068cb2cbcf5fe7ee 192 SMART SM00421 14 71 0.0096 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 AMC99_00324 04a2f7ba0c993dcc068cb2cbcf5fe7ee 192 Gene3D G3DSA:1.10.10.10 2 73 2.1E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01842 0be3b6304ae6f97d98e76fd4fe85f10e 98 Pfam PF11011 Protein of unknown function (DUF2849) 2 83 7.6E-21 T 11-10-2018 IPR021270 Protein of unknown function DUF2849 AMC99_02040 c09b9b414dcc0f078bfe03ade8cd5ccb 286 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 1 174 9.9E-47 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMC99_02040 c09b9b414dcc0f078bfe03ade8cd5ccb 286 SUPERFAMILY SSF52402 1 174 6.9E-47 T 11-10-2018 AMC99_02040 c09b9b414dcc0f078bfe03ade8cd5ccb 286 Pfam PF01171 PP-loop family 1 172 8.3E-48 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AMC99_02040 c09b9b414dcc0f078bfe03ade8cd5ccb 286 Gene3D G3DSA:3.40.50.620 1 201 1.0E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02040 c09b9b414dcc0f078bfe03ade8cd5ccb 286 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 274 17.785 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMC99_00572 f38ec25e64ec9231bdd5a8af570f8b85 192 Pfam PF02104 SURF1 family 16 174 1.6E-12 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00934 cfe349121c58853a9b0cf925d3a72879 292 Gene3D G3DSA:1.10.443.10 96 290 4.5E-51 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMC99_00934 cfe349121c58853a9b0cf925d3a72879 292 Gene3D G3DSA:1.10.150.130 2 90 4.2E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMC99_00934 cfe349121c58853a9b0cf925d3a72879 292 Pfam PF00589 Phage integrase family 102 272 3.6E-39 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_00934 cfe349121c58853a9b0cf925d3a72879 292 SUPERFAMILY SSF56349 3 278 1.03E-49 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_00934 cfe349121c58853a9b0cf925d3a72879 292 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 81 1.8E-12 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMC99_00934 cfe349121c58853a9b0cf925d3a72879 292 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 286 50.842 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD AMC99_02295 527d43b91a876b70a8e16c0cb0fb070b 167 Pfam PF14352 Domain of unknown function (DUF4402) 26 166 6.0E-23 T 11-10-2018 IPR025514 Protein of unknown function DUF4402 AMC99_02032 b2e62e694dcbf4bac238c55703c72040 679 Gene3D G3DSA:2.40.10.10 575 644 2.0E-5 T 11-10-2018 AMC99_02032 b2e62e694dcbf4bac238c55703c72040 679 Pfam PF10459 Peptidase S46 21 677 1.5E-204 T 11-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 AMC99_02032 b2e62e694dcbf4bac238c55703c72040 679 SUPERFAMILY SSF50494 60 647 1.26E-20 T 11-10-2018 IPR009003 Peptidase S1, PA clan AMC99_01929 d21a08ee3764c555ecde540f82174697 335 Pfam PF00482 Type II secretion system (T2SS), protein F 190 318 8.4E-20 T 11-10-2018 IPR018076 Type II secretion system F domain AMC99_00442 a12029a998e8f2d82b95ff483746da1c 170 Gene3D G3DSA:3.30.1330.60 49 168 2.9E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_00442 a12029a998e8f2d82b95ff483746da1c 170 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 3 168 30.328 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 AMC99_00442 a12029a998e8f2d82b95ff483746da1c 170 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 167 6.6E-43 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 AMC99_00442 a12029a998e8f2d82b95ff483746da1c 170 SUPERFAMILY SSF103088 53 165 1.7E-34 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_00442 a12029a998e8f2d82b95ff483746da1c 170 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 AMC99_00442 a12029a998e8f2d82b95ff483746da1c 170 PRINTS PR01021 OMPA domain signature 68 90 1.1E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_00442 a12029a998e8f2d82b95ff483746da1c 170 PRINTS PR01021 OMPA domain signature 113 129 1.1E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_00442 a12029a998e8f2d82b95ff483746da1c 170 PRINTS PR01021 OMPA domain signature 98 113 1.1E-14 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMC99_00442 a12029a998e8f2d82b95ff483746da1c 170 Pfam PF00691 OmpA family 67 162 1.5E-21 T 11-10-2018 IPR006665 OmpA-like domain AMC99_01777 74461af895927983a3326e3164c436ae 249 SMART SM00448 15 125 2.5E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01777 74461af895927983a3326e3164c436ae 249 Gene3D G3DSA:3.40.50.2300 2 138 3.5E-37 T 11-10-2018 AMC99_01777 74461af895927983a3326e3164c436ae 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 170 246 1.3E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_01777 74461af895927983a3326e3164c436ae 249 Gene3D G3DSA:1.10.10.10 149 249 1.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01777 74461af895927983a3326e3164c436ae 249 SMART SM00862 170 246 1.9E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMC99_01777 74461af895927983a3326e3164c436ae 249 Pfam PF00072 Response regulator receiver domain 17 125 4.0E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01777 74461af895927983a3326e3164c436ae 249 SUPERFAMILY SSF52172 13 138 3.7E-40 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01777 74461af895927983a3326e3164c436ae 249 SUPERFAMILY SSF46894 147 247 1.39E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMC99_00637 c052656c7cbe87edb731f5990562800c 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 416 1.5E-56 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_00637 c052656c7cbe87edb731f5990562800c 445 Pfam PF01554 MatE 22 181 3.2E-13 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_00637 c052656c7cbe87edb731f5990562800c 445 Pfam PF01554 MatE 251 397 6.5E-13 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_00277 f8d9d4b9003ab2279346fdda10a80e4d 456 Gene3D G3DSA:2.40.440.10 166 403 6.5E-31 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_00277 f8d9d4b9003ab2279346fdda10a80e4d 456 Pfam PF03734 L,D-transpeptidase catalytic domain 218 367 2.8E-22 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMC99_00277 f8d9d4b9003ab2279346fdda10a80e4d 456 SUPERFAMILY SSF141523 215 357 8.63E-17 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_02302 c6785cd1918e4ca81060c132b4c542f7 177 Gene3D G3DSA:1.25.10.110 70 138 2.1E-7 T 11-10-2018 AMC99_02302 c6785cd1918e4ca81060c132b4c542f7 177 SUPERFAMILY SSF48371 55 128 4.87E-8 T 11-10-2018 IPR016024 Armadillo-type fold AMC99_01659 a313e339cdbf29d3f50017e6dc5efd20 275 Gene3D G3DSA:3.60.130.10 1 274 9.0E-84 T 11-10-2018 AMC99_01659 a313e339cdbf29d3f50017e6dc5efd20 275 SUPERFAMILY SSF51197 2 272 7.78E-82 T 11-10-2018 AMC99_01659 a313e339cdbf29d3f50017e6dc5efd20 275 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 4 267 3.0E-62 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AMC99_01448 f7a61a23ec5ad6df5a6276fbcef928a4 228 Gene3D G3DSA:3.10.290.10 1 46 7.3E-7 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AMC99_01448 f7a61a23ec5ad6df5a6276fbcef928a4 228 Gene3D G3DSA:3.30.70.580 47 208 2.4E-50 T 11-10-2018 AMC99_01448 f7a61a23ec5ad6df5a6276fbcef928a4 228 Gene3D G3DSA:3.30.70.1560 110 200 2.4E-50 T 11-10-2018 AMC99_01448 f7a61a23ec5ad6df5a6276fbcef928a4 228 Pfam PF00849 RNA pseudouridylate synthase 45 181 1.1E-12 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01448 f7a61a23ec5ad6df5a6276fbcef928a4 228 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 49 210 2.2E-44 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMC99_01448 f7a61a23ec5ad6df5a6276fbcef928a4 228 SUPERFAMILY SSF55120 41 215 4.48E-40 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMC99_01448 f7a61a23ec5ad6df5a6276fbcef928a4 228 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 86 100 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMC99_01063 c3f6509308f32e61440c686d821679e7 182 SUPERFAMILY SSF56925 27 182 6.28E-9 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMC99_01063 c3f6509308f32e61440c686d821679e7 182 Gene3D G3DSA:2.40.160.20 25 182 5.9E-7 T 11-10-2018 AMC99_00119 642c78018b0dbbdc6832add7a1cfe75e 144 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 129 9.9E-31 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMC99_00119 642c78018b0dbbdc6832add7a1cfe75e 144 Pfam PF02082 Transcriptional regulator 1 80 6.4E-23 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AMC99_00119 642c78018b0dbbdc6832add7a1cfe75e 144 SUPERFAMILY SSF46785 3 132 4.9E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00119 642c78018b0dbbdc6832add7a1cfe75e 144 Gene3D G3DSA:1.10.10.10 1 139 9.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02041 5e524ef8312f9a05f8b03c0d5d783058 315 SUPERFAMILY SSF48452 191 295 1.81E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02041 5e524ef8312f9a05f8b03c0d5d783058 315 Gene3D G3DSA:1.25.40.10 190 308 3.5E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 Gene3D G3DSA:3.30.565.10 191 356 2.4E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 232 351 1.9E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 Pfam PF00989 PAS fold 16 62 2.2E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 Gene3D G3DSA:1.10.287.130 131 185 3.3E-11 T 11-10-2018 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 SUPERFAMILY SSF47384 131 186 1.31E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 SUPERFAMILY SSF55874 186 350 1.57E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 2.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 310 2.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 2.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 186 1.2E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 Gene3D G3DSA:3.30.450.20 14 109 7.7E-11 T 11-10-2018 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 SMART SM00388 125 189 2.8E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 SUPERFAMILY SSF55785 17 100 9.07E-8 T 11-10-2018 IPR035965 PAS domain superfamily AMC99_01191 7a9ec4a79f597b2a42a89c262644a4d6 357 SMART SM00387 229 352 2.9E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02252 5b201fd9f7eea3fdbca6d14a4ade519d 176 Pfam PF02698 DUF218 domain 34 138 4.3E-8 T 11-10-2018 IPR003848 Domain of unknown function DUF218 AMC99_02252 5b201fd9f7eea3fdbca6d14a4ade519d 176 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 29 170 5.0E-5 T 11-10-2018 AMC99_02437 0f95d51a1d534b04cd14ee45e5ab6578 226 Gene3D G3DSA:1.20.120.1630 3 185 7.8E-8 T 11-10-2018 AMC99_02437 0f95d51a1d534b04cd14ee45e5ab6578 226 Pfam PF07298 NnrU protein 7 215 1.8E-37 T 11-10-2018 IPR009915 NnrU domain AMC99_02486 9b7d04005d06591cc7aea87d0943a615 228 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 208 3.7E-17 T 11-10-2018 AMC99_00194 50c0a252095384c1a91904ac880dd1e9 217 SUPERFAMILY SSF46689 19 97 1.65E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_00194 50c0a252095384c1a91904ac880dd1e9 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 3.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00194 50c0a252095384c1a91904ac880dd1e9 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 3.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00194 50c0a252095384c1a91904ac880dd1e9 217 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 161 213 1.1E-12 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type AMC99_00194 50c0a252095384c1a91904ac880dd1e9 217 Gene3D G3DSA:1.10.10.60 18 73 2.0E-19 T 11-10-2018 AMC99_00194 50c0a252095384c1a91904ac880dd1e9 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 6.9E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00194 50c0a252095384c1a91904ac880dd1e9 217 SUPERFAMILY SSF48498 94 214 2.35E-9 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMC99_00194 50c0a252095384c1a91904ac880dd1e9 217 Gene3D G3DSA:1.10.357.10 86 216 4.3E-32 T 11-10-2018 AMC99_00975 3b888889af3ef6d3ce74af6ae8953908 354 SMART SM00861 21 196 2.3E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_00975 3b888889af3ef6d3ce74af6ae8953908 354 Gene3D G3DSA:3.40.50.920 221 354 1.1E-51 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_00975 3b888889af3ef6d3ce74af6ae8953908 354 SUPERFAMILY SSF52518 19 236 1.34E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_00975 3b888889af3ef6d3ce74af6ae8953908 354 Pfam PF02779 Transketolase, pyrimidine binding domain 21 195 5.1E-43 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AMC99_00975 3b888889af3ef6d3ce74af6ae8953908 354 SUPERFAMILY SSF52922 222 353 3.01E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AMC99_00975 3b888889af3ef6d3ce74af6ae8953908 354 Gene3D G3DSA:3.40.50.970 18 220 7.1E-87 T 11-10-2018 AMC99_00975 3b888889af3ef6d3ce74af6ae8953908 354 Pfam PF02780 Transketolase, C-terminal domain 227 344 6.2E-33 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AMC99_01332 5be4d8dc663fd6ef20e2e372ae570a0c 384 SUPERFAMILY SSF53335 124 382 4.65E-65 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01332 5be4d8dc663fd6ef20e2e372ae570a0c 384 Pfam PF02353 Mycolic acid cyclopropane synthetase 117 378 2.6E-62 T 11-10-2018 AMC99_01332 5be4d8dc663fd6ef20e2e372ae570a0c 384 PIRSF PIRSF003085 8 384 4.0E-97 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 AMC99_01332 5be4d8dc663fd6ef20e2e372ae570a0c 384 Gene3D G3DSA:3.40.50.150 123 384 2.4E-77 T 11-10-2018 AMC99_01426 be6699036716beb71fa30daf06cda6c7 324 SUPERFAMILY SSF50129 1 139 7.15E-39 T 11-10-2018 IPR011032 GroES-like superfamily AMC99_01426 be6699036716beb71fa30daf06cda6c7 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.6E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMC99_01426 be6699036716beb71fa30daf06cda6c7 324 SUPERFAMILY SSF51735 111 268 5.26E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01426 be6699036716beb71fa30daf06cda6c7 324 Gene3D G3DSA:3.40.50.720 123 292 8.9E-93 T 11-10-2018 AMC99_01426 be6699036716beb71fa30daf06cda6c7 324 SMART SM00829 11 322 5.2E-52 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMC99_01426 be6699036716beb71fa30daf06cda6c7 324 Pfam PF00107 Zinc-binding dehydrogenase 151 266 7.2E-22 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMC99_01426 be6699036716beb71fa30daf06cda6c7 324 Gene3D G3DSA:3.90.180.10 19 322 8.9E-93 T 11-10-2018 AMC99_02619 be4a9fb86cb36e16ac370d4325fc32e6 274 Gene3D G3DSA:3.40.50.720 4 274 1.2E-56 T 11-10-2018 AMC99_02619 be4a9fb86cb36e16ac370d4325fc32e6 274 SUPERFAMILY SSF51735 6 263 1.1E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02619 be4a9fb86cb36e16ac370d4325fc32e6 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 259 1.1E-83 T 11-10-2018 AMC99_02619 be4a9fb86cb36e16ac370d4325fc32e6 274 PIRSF PIRSF000094 2 267 1.4E-107 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AMC99_01734 a0ce2f05f343ca59c1f8cbabdf3b1d4f 439 Gene3D G3DSA:3.40.50.300 188 426 3.6E-71 T 11-10-2018 AMC99_01734 a0ce2f05f343ca59c1f8cbabdf3b1d4f 439 Gene3D G3DSA:3.30.450.380 9 186 5.4E-40 T 11-10-2018 AMC99_01734 a0ce2f05f343ca59c1f8cbabdf3b1d4f 439 SUPERFAMILY SSF52540 74 374 9.88E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01734 a0ce2f05f343ca59c1f8cbabdf3b1d4f 439 Pfam PF00437 Type II/IV secretion system protein 92 367 1.6E-78 T 11-10-2018 IPR001482 Type II/IV secretion system protein AMC99_01359 03c22b58ac903061f67b8ea59aad4f86 267 Gene3D G3DSA:3.90.226.10 1 206 6.2E-63 T 11-10-2018 AMC99_01359 03c22b58ac903061f67b8ea59aad4f86 267 Gene3D G3DSA:1.10.12.10 209 265 2.0E-13 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMC99_01359 03c22b58ac903061f67b8ea59aad4f86 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMC99_01359 03c22b58ac903061f67b8ea59aad4f86 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 264 1.7E-55 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_01359 03c22b58ac903061f67b8ea59aad4f86 267 SUPERFAMILY SSF52096 3 266 2.7E-79 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 Gene3D G3DSA:3.40.190.10 95 172 1.4E-11 T 11-10-2018 AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 Gene3D G3DSA:3.40.190.10 235 258 2.1E-6 T 11-10-2018 AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 Gene3D G3DSA:3.40.190.10 174 234 2.1E-6 T 11-10-2018 AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 SUPERFAMILY SSF46785 3 85 1.41E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 Gene3D G3DSA:1.10.10.10 6 94 3.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 Pfam PF03466 LysR substrate binding domain 90 172 9.0E-9 T 11-10-2018 IPR005119 LysR, substrate-binding AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 Pfam PF03466 LysR substrate binding domain 188 261 3.2E-7 T 11-10-2018 IPR005119 LysR, substrate-binding AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 SUPERFAMILY SSF53850 84 261 1.99E-16 T 11-10-2018 AMC99_01575 d4b032a9585ca06b2eaffff7bc8f17ed 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.2E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMC99_02330 a5070edebe7a4b555d251cbeeb4f8679 122 Pfam PF05610 Protein of unknown function (DUF779) 16 108 2.8E-42 T 11-10-2018 IPR008497 Protein of unknown function DUF779 AMC99_02330 a5070edebe7a4b555d251cbeeb4f8679 122 PIRSF PIRSF009151 1 122 2.5E-57 T 11-10-2018 IPR008497 Protein of unknown function DUF779 AMC99_00472 c92f39397f351f6a7ec9e750cb5256f0 994 Gene3D G3DSA:2.170.130.10 34 172 2.9E-31 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_00472 c92f39397f351f6a7ec9e750cb5256f0 994 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 167 1.6E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_00472 c92f39397f351f6a7ec9e750cb5256f0 994 SUPERFAMILY SSF56935 41 994 2.5E-96 T 11-10-2018 AMC99_00472 c92f39397f351f6a7ec9e750cb5256f0 994 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 977 994 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site AMC99_00472 c92f39397f351f6a7ec9e750cb5256f0 994 Pfam PF00593 TonB dependent receptor 375 992 3.5E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.2E-40 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 PRINTS PR00340 P-II protein signature 52 75 1.9E-35 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 PRINTS PR00340 P-II protein signature 83 103 1.9E-35 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 PRINTS PR00340 P-II protein signature 2 17 1.9E-35 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 PRINTS PR00340 P-II protein signature 23 41 1.9E-35 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 SMART SM00938 4 105 1.7E-59 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 SUPERFAMILY SSF54913 1 112 9.21E-42 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMC99_02706 5484e3565d8d8d5cd42a00ac74ae2b32 112 Gene3D G3DSA:3.30.70.120 1 112 4.6E-43 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 Gene3D G3DSA:3.30.365.10 39 108 7.3E-10 T 11-10-2018 AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 SUPERFAMILY SSF56003 357 754 2.91E-83 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 358 583 2.6E-24 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 44 92 3.1E-6 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 641 708 3.1E-9 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 SMART SM01008 242 320 6.0E-5 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 Gene3D G3DSA:3.30.365.10 369 460 9.8E-38 T 11-10-2018 AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 SUPERFAMILY SSF56003 8 266 1.06E-28 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 SUPERFAMILY SSF54665 243 317 2.88E-6 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 Gene3D G3DSA:3.30.365.10 618 757 4.6E-26 T 11-10-2018 AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 Gene3D G3DSA:3.30.365.10 359 583 9.8E-38 T 11-10-2018 AMC99_02236 d02f9d46b8a7d9adef6dbabe03540d72 759 PIRSF PIRSF036389 1 758 4.2E-154 T 11-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related AMC99_00118 b50efec059be2de840f99586670d8aa7 673 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 56 658 8.4E-175 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AMC99_00118 b50efec059be2de840f99586670d8aa7 673 SUPERFAMILY SSF51998 56 642 1.1E-140 T 11-10-2018 AMC99_00118 b50efec059be2de840f99586670d8aa7 673 Gene3D G3DSA:3.20.70.20 257 641 6.5E-71 T 11-10-2018 AMC99_00118 b50efec059be2de840f99586670d8aa7 673 Gene3D G3DSA:3.20.70.20 67 218 3.6E-26 T 11-10-2018 AMC99_00118 b50efec059be2de840f99586670d8aa7 673 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 55 657 1.2E-133 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AMC99_00698 c74e1686f9125b0bbf8fb5ef1265d6b6 211 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 102 205 1.2E-15 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMC99_00698 c74e1686f9125b0bbf8fb5ef1265d6b6 211 Gene3D G3DSA:2.60.120.620 18 205 3.2E-48 T 11-10-2018 AMC99_00698 c74e1686f9125b0bbf8fb5ef1265d6b6 211 SMART SM00702 26 205 4.0E-27 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMC99_01176 0a298cc0050030f22b635e900fcab986 353 Gene3D G3DSA:1.10.8.350 55 222 3.9E-74 T 11-10-2018 AMC99_01176 0a298cc0050030f22b635e900fcab986 353 Gene3D G3DSA:1.10.530.10 85 348 3.9E-74 T 11-10-2018 AMC99_01176 0a298cc0050030f22b635e900fcab986 353 Pfam PF13406 Transglycosylase SLT domain 43 349 2.1E-91 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 AMC99_01176 0a298cc0050030f22b635e900fcab986 353 SUPERFAMILY SSF53955 33 352 1.34E-79 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AMC99_01176 0a298cc0050030f22b635e900fcab986 353 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 42 352 9.6E-83 T 11-10-2018 IPR011970 Lytic murein transglycosylase AMC99_00521 535c7becac69598007b7f81c9e9cd34e 938 SUPERFAMILY SSF56935 817 935 2.09E-5 T 11-10-2018 AMC99_00521 535c7becac69598007b7f81c9e9cd34e 938 Gene3D G3DSA:2.40.170.20 169 600 2.7E-15 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_00521 535c7becac69598007b7f81c9e9cd34e 938 SUPERFAMILY SSF56935 34 569 2.3E-32 T 11-10-2018 AMC99_00521 535c7becac69598007b7f81c9e9cd34e 938 Pfam PF00593 TonB dependent receptor 265 573 2.1E-6 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_00521 535c7becac69598007b7f81c9e9cd34e 938 Gene3D G3DSA:2.170.130.10 41 148 2.1E-5 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02327 4f06dd23f92c15b6563f3c3db09b7b94 315 Pfam PF01590 GAF domain 65 193 2.3E-12 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMC99_02327 4f06dd23f92c15b6563f3c3db09b7b94 315 Pfam PF02954 Bacterial regulatory protein, Fis family 272 309 1.1E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_02327 4f06dd23f92c15b6563f3c3db09b7b94 315 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 293 313 7.2E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_02327 4f06dd23f92c15b6563f3c3db09b7b94 315 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 276 293 7.2E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AMC99_02327 4f06dd23f92c15b6563f3c3db09b7b94 315 SUPERFAMILY SSF55781 59 203 9.53E-15 T 11-10-2018 AMC99_02327 4f06dd23f92c15b6563f3c3db09b7b94 315 Gene3D G3DSA:1.10.10.60 271 312 1.7E-13 T 11-10-2018 AMC99_02327 4f06dd23f92c15b6563f3c3db09b7b94 315 Gene3D G3DSA:3.30.450.40 11 200 3.1E-46 T 11-10-2018 IPR029016 GAF-like domain superfamily AMC99_02327 4f06dd23f92c15b6563f3c3db09b7b94 315 SUPERFAMILY SSF46689 272 312 8.29E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_00943 348501cf64f1e53f9b393a3414940ba7 204 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 24 200 1.9E-61 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMC99_00943 348501cf64f1e53f9b393a3414940ba7 204 SUPERFAMILY SSF55620 20 202 3.34E-67 T 11-10-2018 AMC99_00943 348501cf64f1e53f9b393a3414940ba7 204 Gene3D G3DSA:3.30.1130.10 70 202 7.0E-50 T 11-10-2018 AMC99_00943 348501cf64f1e53f9b393a3414940ba7 204 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 19 202 36.576 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMC99_00943 348501cf64f1e53f9b393a3414940ba7 204 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 129 139 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMC99_00943 348501cf64f1e53f9b393a3414940ba7 204 Pfam PF01227 GTP cyclohydrolase I 24 200 6.7E-67 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMC99_00943 348501cf64f1e53f9b393a3414940ba7 204 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 81 97 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AMC99_00943 348501cf64f1e53f9b393a3414940ba7 204 Gene3D G3DSA:1.10.286.10 15 68 2.6E-17 T 11-10-2018 AMC99_02029 702c452363c3c6763e9c0758bde666d3 138 Pfam PF08570 Protein of unknown function (DUF1761) 7 132 8.9E-25 T 11-10-2018 IPR013879 Protein of unknown function DUF1761 AMC99_01800 0118ba3a7763aba6dd99d3a2e193dc69 265 Gene3D G3DSA:3.30.160.110 91 126 6.9E-13 T 11-10-2018 AMC99_01800 0118ba3a7763aba6dd99d3a2e193dc69 265 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 44 161 5.2E-26 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 AMC99_01800 0118ba3a7763aba6dd99d3a2e193dc69 265 SUPERFAMILY SSF51735 2 90 8.27E-5 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01800 0118ba3a7763aba6dd99d3a2e193dc69 265 SUPERFAMILY SSF53790 201 250 2.62E-6 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 AMC99_01800 0118ba3a7763aba6dd99d3a2e193dc69 265 SUPERFAMILY SSF75615 92 181 1.03E-17 T 11-10-2018 AMC99_01800 0118ba3a7763aba6dd99d3a2e193dc69 265 Gene3D G3DSA:3.40.1010.10 197 258 2.0E-5 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 AMC99_00456 92759edb62f41d02c5a40cdb7a61d310 120 Gene3D G3DSA:3.10.180.10 7 120 2.8E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00456 92759edb62f41d02c5a40cdb7a61d310 120 SUPERFAMILY SSF54593 1 118 7.65E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00456 92759edb62f41d02c5a40cdb7a61d310 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 116 2.2E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_01222 fd9180dcf21e58937c7027a525036b08 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 162 172 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_01222 fd9180dcf21e58937c7027a525036b08 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 246 53.837 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_01222 fd9180dcf21e58937c7027a525036b08 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 238 1.4E-53 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_01222 fd9180dcf21e58937c7027a525036b08 253 Gene3D G3DSA:3.20.20.70 1 247 5.9E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01222 fd9180dcf21e58937c7027a525036b08 253 SUPERFAMILY SSF51351 2 244 4.19E-83 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_01222 fd9180dcf21e58937c7027a525036b08 253 Pfam PF00121 Triosephosphate isomerase 6 243 2.4E-82 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AMC99_01074 13d50e9b66754b9a331503c357c69bec 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 142 5.2E-44 T 11-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 AMC99_01074 13d50e9b66754b9a331503c357c69bec 145 SUPERFAMILY SSF89623 1 142 4.71E-54 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMC99_01074 13d50e9b66754b9a331503c357c69bec 145 PIRSF PIRSF005384 1 145 1.5E-54 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMC99_01074 13d50e9b66754b9a331503c357c69bec 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 141 7.8E-47 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMC99_01074 13d50e9b66754b9a331503c357c69bec 145 Gene3D G3DSA:3.40.1400.10 1 143 1.1E-53 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMC99_01074 13d50e9b66754b9a331503c357c69bec 145 Pfam PF02502 Ribose/Galactose Isomerase 3 140 6.2E-52 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AMC99_02366 d91390ddeeb81baf719ba174a9bb804c 264 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 16.911 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMC99_02366 d91390ddeeb81baf719ba174a9bb804c 264 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 8 257 2.9E-66 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMC99_02366 d91390ddeeb81baf719ba174a9bb804c 264 Pfam PF02673 Bacitracin resistance protein BacA 7 259 3.8E-76 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 Gene3D G3DSA:2.60.120.10 1 134 2.4E-22 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 171 187 2.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 157 171 2.2E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 Gene3D G3DSA:1.10.10.10 136 205 4.0E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 Pfam PF00027 Cyclic nucleotide-binding domain 21 106 9.1E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 Pfam PF13545 Crp-like helix-turn-helix domain 140 205 2.1E-12 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 SUPERFAMILY SSF51206 2 129 2.36E-24 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 SUPERFAMILY SSF46785 139 204 4.26E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 SMART SM00419 150 198 7.8E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 AMC99_02731 60cd1e1349c108c1afee7a7c34798c4f 208 SMART SM00100 2 120 3.2E-19 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain AMC99_02490 7b7ee7ace9dab803af7c0ceed51ab209 165 Pfam PF00583 Acetyltransferase (GNAT) family 56 145 3.1E-15 T 11-10-2018 IPR000182 GNAT domain AMC99_02490 7b7ee7ace9dab803af7c0ceed51ab209 165 SUPERFAMILY SSF55729 17 145 1.03E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02490 7b7ee7ace9dab803af7c0ceed51ab209 165 Gene3D G3DSA:3.40.630.30 4 153 1.9E-28 T 11-10-2018 AMC99_02428 dc57fcd182444fb9c7c4054b4e823b0c 138 Pfam PF04138 GtrA-like protein 15 132 7.3E-14 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 AMC99_02511 144874fcddb4273fd81b094461267ff0 119 Gene3D G3DSA:3.30.70.120 15 118 6.4E-26 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMC99_02511 144874fcddb4273fd81b094461267ff0 119 Pfam PF03091 CutA1 divalent ion tolerance protein 18 112 1.4E-23 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AMC99_02511 144874fcddb4273fd81b094461267ff0 119 SUPERFAMILY SSF54913 18 113 3.15E-26 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMC99_01015 06342a087f6c2d0a6b9a4852c614e539 102 Pfam PF07238 PilZ domain 8 94 2.9E-5 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMC99_01049 c4c93351ef30394c87981257a6d1ffb7 315 Gene3D G3DSA:3.40.50.300 16 295 8.9E-78 T 11-10-2018 AMC99_01049 c4c93351ef30394c87981257a6d1ffb7 315 Gene3D G3DSA:1.10.20.140 124 191 8.9E-78 T 11-10-2018 AMC99_01049 c4c93351ef30394c87981257a6d1ffb7 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 13 291 5.4E-66 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMC99_01049 c4c93351ef30394c87981257a6d1ffb7 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 314 24.398 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMC99_01049 c4c93351ef30394c87981257a6d1ffb7 315 Pfam PF01715 IPP transferase 50 291 9.4E-62 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AMC99_01049 c4c93351ef30394c87981257a6d1ffb7 315 SUPERFAMILY SSF52540 13 153 2.66E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01049 c4c93351ef30394c87981257a6d1ffb7 315 SUPERFAMILY SSF52540 12 220 1.49E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01922 eaba0b3ebd48b0dd053b57bb8ffa08b0 342 SUPERFAMILY SSF53474 41 337 7.63E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01922 eaba0b3ebd48b0dd053b57bb8ffa08b0 342 Pfam PF12146 Serine aminopeptidase, S33 65 321 4.7E-34 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMC99_01922 eaba0b3ebd48b0dd053b57bb8ffa08b0 342 Gene3D G3DSA:3.40.50.1820 37 339 1.3E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00253 59f2f3a5237027ac94e05f9ee9e9059e 219 PIRSF PIRSF031890 1 219 8.0E-58 T 11-10-2018 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related AMC99_00253 59f2f3a5237027ac94e05f9ee9e9059e 219 Gene3D G3DSA:3.10.450.240 70 218 1.4E-34 T 11-10-2018 AMC99_00253 59f2f3a5237027ac94e05f9ee9e9059e 219 Pfam PF04280 Tim44-like domain 73 217 5.2E-43 T 11-10-2018 IPR007379 Tim44-like domain AMC99_00253 59f2f3a5237027ac94e05f9ee9e9059e 219 SMART SM00978 72 218 7.5E-47 T 11-10-2018 IPR007379 Tim44-like domain AMC99_00253 59f2f3a5237027ac94e05f9ee9e9059e 219 SUPERFAMILY SSF54427 14 216 5.43E-46 T 11-10-2018 IPR032710 NTF2-like domain superfamily AMC99_02239 51bf92a228d78681a1caffd2e753db44 277 Gene3D G3DSA:3.30.479.30 59 194 4.0E-22 T 11-10-2018 AMC99_02239 51bf92a228d78681a1caffd2e753db44 277 SMART SM00244 24 193 1.1E-20 T 11-10-2018 IPR001107 Band 7 domain AMC99_02239 51bf92a228d78681a1caffd2e753db44 277 SUPERFAMILY SSF117892 63 199 3.14E-24 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AMC99_02239 51bf92a228d78681a1caffd2e753db44 277 PIRSF PIRSF005651 2 277 7.1E-59 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AMC99_02239 51bf92a228d78681a1caffd2e753db44 277 Pfam PF01145 SPFH domain / Band 7 family 28 207 6.2E-24 T 11-10-2018 IPR001107 Band 7 domain AMC99_02239 51bf92a228d78681a1caffd2e753db44 277 PRINTS PR00721 Stomatin signature 187 208 9.2E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMC99_02239 51bf92a228d78681a1caffd2e753db44 277 PRINTS PR00721 Stomatin signature 168 186 9.2E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMC99_02239 51bf92a228d78681a1caffd2e753db44 277 PRINTS PR00721 Stomatin signature 85 106 9.2E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AMC99_01650 9a2dbeaabc3b3b76be303dfc03e61c87 235 Pfam PF13852 Protein of unknown function (DUF4197) 41 230 3.5E-28 T 11-10-2018 IPR025245 Protein of unknown function DUF4197 AMC99_02367 87532a306f19726b693f8508420c83f1 710 Gene3D G3DSA:3.40.390.10 51 710 4.4E-209 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 AMC99_02367 87532a306f19726b693f8508420c83f1 710 Pfam PF05649 Peptidase family M13 56 452 9.0E-78 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AMC99_02367 87532a306f19726b693f8508420c83f1 710 SUPERFAMILY SSF55486 46 710 2.93E-185 T 11-10-2018 AMC99_02367 87532a306f19726b693f8508420c83f1 710 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 496 508 3.0E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_02367 87532a306f19726b693f8508420c83f1 710 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 535 551 3.0E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_02367 87532a306f19726b693f8508420c83f1 710 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 514 526 3.0E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_02367 87532a306f19726b693f8508420c83f1 710 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 608 619 3.0E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_02367 87532a306f19726b693f8508420c83f1 710 Gene3D G3DSA:1.10.1380.10 82 491 4.4E-209 T 11-10-2018 AMC99_02367 87532a306f19726b693f8508420c83f1 710 Pfam PF01431 Peptidase family M13 504 707 4.4E-68 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMC99_00517 6821641b48f1f4eba29c5101351dfbbf 59 Gene3D G3DSA:3.30.50.10 1 54 4.6E-14 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 AMC99_00517 6821641b48f1f4eba29c5101351dfbbf 59 SUPERFAMILY SSF57716 3 49 2.14E-14 T 11-10-2018 AMC99_00517 6821641b48f1f4eba29c5101351dfbbf 59 Pfam PF03884 DNA gyrase inhibitor YacG 4 48 6.1E-13 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 AMC99_01374 c013229de1a4953a410358a0eeb50cef 564 SUPERFAMILY SSF53474 229 486 2.96E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01374 c013229de1a4953a410358a0eeb50cef 564 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 73 241 2.5E-57 T 11-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 AMC99_01374 c013229de1a4953a410358a0eeb50cef 564 Pfam PF00561 alpha/beta hydrolase fold 246 486 2.5E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01374 c013229de1a4953a410358a0eeb50cef 564 Gene3D G3DSA:3.40.50.1820 232 492 2.4E-7 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02546 7d8bd4a98e7408b8c7a23662796436bc 133 SUPERFAMILY SSF54427 8 115 6.27E-17 T 11-10-2018 IPR032710 NTF2-like domain superfamily AMC99_02546 7d8bd4a98e7408b8c7a23662796436bc 133 Gene3D G3DSA:3.10.450.50 2 131 2.1E-39 T 11-10-2018 AMC99_02546 7d8bd4a98e7408b8c7a23662796436bc 133 Pfam PF12680 SnoaL-like domain 9 104 9.6E-11 T 11-10-2018 IPR037401 SnoaL-like domain AMC99_01013 4ca18bb7ad913d5924ec599d657147e0 219 SUPERFAMILY SSF52540 30 128 4.51E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01013 4ca18bb7ad913d5924ec599d657147e0 219 Gene3D G3DSA:3.40.50.300 10 130 3.9E-11 T 11-10-2018 AMC99_01760 0c4002f88a8b84b9608d1bc14e02beeb 182 Gene3D G3DSA:3.10.540.10 9 93 3.2E-28 T 11-10-2018 AMC99_01760 0c4002f88a8b84b9608d1bc14e02beeb 182 Pfam PF06938 Protein of unknown function (DUF1285) 42 177 3.2E-42 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 AMC99_01760 0c4002f88a8b84b9608d1bc14e02beeb 182 PIRSF PIRSF029557 9 182 1.9E-43 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 AMC99_02631 95fc24c8bfc9e5f6a4c22c9405d1b1dc 88 Pfam PF04226 Transglycosylase associated protein 33 84 7.1E-12 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 AMC99_02594 41728ac8cff1c6b66279734d21c8ee89 173 SUPERFAMILY SSF47240 5 142 1.04E-20 T 11-10-2018 IPR009078 Ferritin-like superfamily AMC99_02594 41728ac8cff1c6b66279734d21c8ee89 173 Gene3D G3DSA:1.20.1260.10 2 146 5.4E-7 T 11-10-2018 IPR012347 Ferritin-like AMC99_02594 41728ac8cff1c6b66279734d21c8ee89 173 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 1 173 28.467 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AMC99_02594 41728ac8cff1c6b66279734d21c8ee89 173 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 6 173 6.0E-69 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AMC99_02525 bae47583eea26d4fa435bb28354030fc 500 Gene3D G3DSA:1.20.1600.10 34 444 5.4E-95 T 11-10-2018 AMC99_02525 bae47583eea26d4fa435bb28354030fc 500 SUPERFAMILY SSF56954 9 434 3.66E-90 T 11-10-2018 AMC99_02525 bae47583eea26d4fa435bb28354030fc 500 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 32 440 3.8E-85 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 AMC99_02525 bae47583eea26d4fa435bb28354030fc 500 Pfam PF02321 Outer membrane efflux protein 36 222 9.4E-30 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_02525 bae47583eea26d4fa435bb28354030fc 500 Pfam PF02321 Outer membrane efflux protein 242 433 1.4E-33 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_00633 819a4e09e685ea2a0579bbe083ed398c 99 Gene3D G3DSA:3.30.530.20 4 98 1.4E-15 T 11-10-2018 IPR023393 START-like domain superfamily AMC99_00633 819a4e09e685ea2a0579bbe083ed398c 99 SUPERFAMILY SSF55961 17 96 2.03E-10 T 11-10-2018 AMC99_00633 819a4e09e685ea2a0579bbe083ed398c 99 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 96 7.3E-9 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like AMC99_02073 c5d33637c485326372603c40f0e8f39f 626 SUPERFAMILY SSF58104 292 619 1.57E-50 T 11-10-2018 AMC99_02073 c5d33637c485326372603c40f0e8f39f 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 585 7.0E-27 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_02073 c5d33637c485326372603c40f0e8f39f 626 Gene3D G3DSA:1.20.1480.50 232 319 1.2E-8 T 11-10-2018 AMC99_02073 c5d33637c485326372603c40f0e8f39f 626 Gene3D G3DSA:1.10.287.950 320 621 1.2E-47 T 11-10-2018 AMC99_02073 c5d33637c485326372603c40f0e8f39f 626 SMART SM00283 366 620 2.0E-28 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_02453 3437e9dc75ff1d7fb5b5a120c338ebfc 400 Gene3D G3DSA:1.20.1250.20 216 400 4.6E-19 T 11-10-2018 AMC99_02453 3437e9dc75ff1d7fb5b5a120c338ebfc 400 SUPERFAMILY SSF103473 12 398 1.57E-38 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_02453 3437e9dc75ff1d7fb5b5a120c338ebfc 400 Gene3D G3DSA:1.20.1250.20 8 198 1.7E-13 T 11-10-2018 AMC99_02453 3437e9dc75ff1d7fb5b5a120c338ebfc 400 Pfam PF07690 Major Facilitator Superfamily 230 397 4.0E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_02065 13fcc5a6b9f5b82f68deaece3894c08d 254 SUPERFAMILY SSF53639 14 221 2.94E-52 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMC99_02065 13fcc5a6b9f5b82f68deaece3894c08d 254 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 21 201 4.8E-37 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMC99_02065 13fcc5a6b9f5b82f68deaece3894c08d 254 SMART SM01007 20 201 5.1E-48 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal AMC99_02065 13fcc5a6b9f5b82f68deaece3894c08d 254 Gene3D G3DSA:3.40.225.10 6 254 3.9E-63 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily AMC99_00022 64da559953079b483d873818c131ba10 316 Pfam PF13460 NAD(P)H-binding 16 206 2.5E-16 T 11-10-2018 IPR016040 NAD(P)-binding domain AMC99_00022 64da559953079b483d873818c131ba10 316 Gene3D G3DSA:3.40.50.720 12 301 1.3E-53 T 11-10-2018 AMC99_00022 64da559953079b483d873818c131ba10 316 SUPERFAMILY SSF51735 9 255 5.97E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02559 44d8a971e894cfdc1ac0acfc2e9650f3 162 SUPERFAMILY SSF55781 16 162 2.18E-40 T 11-10-2018 AMC99_02559 44d8a971e894cfdc1ac0acfc2e9650f3 162 SMART SM00065 34 161 0.0099 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMC99_02559 44d8a971e894cfdc1ac0acfc2e9650f3 162 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 101 118 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site AMC99_02559 44d8a971e894cfdc1ac0acfc2e9650f3 162 Pfam PF13185 GAF domain 54 160 1.7E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 AMC99_02559 44d8a971e894cfdc1ac0acfc2e9650f3 162 Gene3D G3DSA:3.30.450.40 12 162 5.6E-60 T 11-10-2018 IPR029016 GAF-like domain superfamily AMC99_02571 1fb8843383b3aadd159c80d8ccdcb3fd 193 Gene3D G3DSA:3.40.630.30 8 172 4.8E-41 T 11-10-2018 AMC99_02571 1fb8843383b3aadd159c80d8ccdcb3fd 193 SUPERFAMILY SSF55729 12 164 6.78E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02571 1fb8843383b3aadd159c80d8ccdcb3fd 193 Pfam PF13302 Acetyltransferase (GNAT) domain 15 159 1.6E-28 T 11-10-2018 IPR000182 GNAT domain AMC99_02046 30c50528d9a19bfdba1b108c4b4dcaee 162 Pfam PF07323 Protein of unknown function (DUF1465) 6 148 1.4E-33 T 11-10-2018 IPR010848 Protein of unknown function DUF1465 AMC99_02046 30c50528d9a19bfdba1b108c4b4dcaee 162 Gene3D G3DSA:1.10.8.930 5 131 1.5E-28 T 11-10-2018 IPR038301 AraC-like superfamily AMC99_00344 868bb0da847e1046b6bcf95790de0dea 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 4.8E-18 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_00344 868bb0da847e1046b6bcf95790de0dea 131 Gene3D G3DSA:3.10.180.10 1 127 1.9E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00344 868bb0da847e1046b6bcf95790de0dea 131 SUPERFAMILY SSF54593 1 128 1.48E-29 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_00798 4748c9f15102d9a888da4aa5d0ae34df 39 Pfam PF10617 Protein of unknown function (DUF2474) 6 35 1.5E-11 T 11-10-2018 IPR018895 Protein of unknown function DUF2474 AMC99_00567 ed1f512d781fd8e4cf8d5cd5cd121f78 310 Gene3D G3DSA:1.10.357.140 27 197 2.0E-12 T 11-10-2018 AMC99_00567 ed1f512d781fd8e4cf8d5cd5cd121f78 310 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 20 300 8.0E-94 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AMC99_00567 ed1f512d781fd8e4cf8d5cd5cd121f78 310 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 17 302 19.407 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AMC99_00567 ed1f512d781fd8e4cf8d5cd5cd121f78 310 Pfam PF01040 UbiA prenyltransferase family 33 267 5.4E-54 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMC99_00567 ed1f512d781fd8e4cf8d5cd5cd121f78 310 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AMC99_00164 a21c31127131e866b2009a26ef54b7be 283 Gene3D G3DSA:3.40.50.300 97 196 1.1E-10 T 11-10-2018 AMC99_00164 a21c31127131e866b2009a26ef54b7be 283 SUPERFAMILY SSF53795 98 174 3.97E-14 T 11-10-2018 AMC99_01757 976951767f515364269b35d4c0701f59 207 Gene3D G3DSA:3.30.420.10 7 206 5.5E-71 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMC99_01757 976951767f515364269b35d4c0701f59 207 Pfam PF01351 Ribonuclease HII 17 200 3.0E-37 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain AMC99_01757 976951767f515364269b35d4c0701f59 207 Hamap MF_00052_B Ribonuclease HII [rnhB]. 15 201 34.632 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 AMC99_01757 976951767f515364269b35d4c0701f59 207 SUPERFAMILY SSF53098 14 204 2.43E-63 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMC99_02386 26aa552b29cc28061721eb39efb49956 187 Gene3D G3DSA:2.60.450.10 40 169 1.4E-18 T 11-10-2018 AMC99_02386 26aa552b29cc28061721eb39efb49956 187 Pfam PF03968 OstA-like protein 50 154 8.3E-16 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal AMC99_02538 661884e6bdaf04b70c7be8878cd9ca3f 198 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 188 4.2E-37 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMC99_02538 661884e6bdaf04b70c7be8878cd9ca3f 198 SUPERFAMILY SSF52540 4 193 7.94E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02538 661884e6bdaf04b70c7be8878cd9ca3f 198 Pfam PF01121 Dephospho-CoA kinase 6 176 1.7E-41 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMC99_02538 661884e6bdaf04b70c7be8878cd9ca3f 198 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 4 197 25.214 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AMC99_02538 661884e6bdaf04b70c7be8878cd9ca3f 198 Gene3D G3DSA:3.40.50.300 1 198 2.3E-57 T 11-10-2018 AMC99_00968 8626e24a04e00233e6c893395ec53e44 163 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 11 150 4.5E-36 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMC99_00968 8626e24a04e00233e6c893395ec53e44 163 Gene3D G3DSA:3.40.50.2300 2 162 7.3E-50 T 11-10-2018 AMC99_00968 8626e24a04e00233e6c893395ec53e44 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 52 68 2.7E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMC99_00968 8626e24a04e00233e6c893395ec53e44 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 86 101 2.7E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMC99_00968 8626e24a04e00233e6c893395ec53e44 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 128 143 2.7E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMC99_00968 8626e24a04e00233e6c893395ec53e44 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 11 28 2.7E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMC99_00968 8626e24a04e00233e6c893395ec53e44 163 SMART SM00226 9 156 8.8E-41 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I AMC99_00968 8626e24a04e00233e6c893395ec53e44 163 SUPERFAMILY SSF52788 10 157 6.93E-44 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMC99_00604 c1202a16aaf33b733394bfd4b2943de0 300 Gene3D G3DSA:1.10.357.140 38 182 4.0E-41 T 11-10-2018 AMC99_00604 c1202a16aaf33b733394bfd4b2943de0 300 Gene3D G3DSA:1.20.120.1780 183 298 1.4E-13 T 11-10-2018 AMC99_00604 c1202a16aaf33b733394bfd4b2943de0 300 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 17 300 24.186 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AMC99_00604 c1202a16aaf33b733394bfd4b2943de0 300 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 26 295 4.5E-90 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 AMC99_00604 c1202a16aaf33b733394bfd4b2943de0 300 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 78 100 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AMC99_00604 c1202a16aaf33b733394bfd4b2943de0 300 Pfam PF01040 UbiA prenyltransferase family 41 280 1.3E-50 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AMC99_02527 381f138438384eb6bac7dbfd2abe9ba8 130 SUPERFAMILY SSF52833 23 124 6.04E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02527 381f138438384eb6bac7dbfd2abe9ba8 130 Gene3D G3DSA:3.40.30.10 22 129 4.8E-24 T 11-10-2018 AMC99_02232 e4281951db417f20be92b362bb525203 52 Pfam PF07896 Protein of unknown function (DUF1674) 11 52 3.6E-8 T 11-10-2018 IPR012875 Protein of unknown function DUF1674 AMC99_01024 77531238a954d652eb669369ba38e292 416 Gene3D G3DSA:1.10.3720.10 190 415 1.2E-33 T 11-10-2018 IPR035906 MetI-like superfamily AMC99_01024 77531238a954d652eb669369ba38e292 416 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 175 413 2.7E-64 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AMC99_01024 77531238a954d652eb669369ba38e292 416 SUPERFAMILY SSF161098 189 403 9.94E-37 T 11-10-2018 IPR035906 MetI-like superfamily AMC99_01024 77531238a954d652eb669369ba38e292 416 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 213 411 1.2E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AMC99_01024 77531238a954d652eb669369ba38e292 416 Pfam PF11812 Domain of unknown function (DUF3333) 14 160 1.9E-29 T 11-10-2018 IPR024573 Domain of unknown function DUF3333 AMC99_00703 427a1b2630feacd774f7048c98bdedd9 156 Pfam PF03100 CcmE 7 133 2.7E-42 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AMC99_00703 427a1b2630feacd774f7048c98bdedd9 156 Gene3D G3DSA:2.40.50.140 32 139 2.3E-35 T 11-10-2018 AMC99_00703 427a1b2630feacd774f7048c98bdedd9 156 SUPERFAMILY SSF82093 32 137 1.1E-35 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 AMC99_00703 427a1b2630feacd774f7048c98bdedd9 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 4 144 28.54 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 167 1.6E-60 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 6 563 2.9E-237 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 SUPERFAMILY SSF52518 4 171 2.0E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 Gene3D G3DSA:3.40.50.970 363 579 3.6E-67 T 11-10-2018 AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 332 1.4E-44 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 Gene3D G3DSA:3.40.50.1220 191 358 2.9E-61 T 11-10-2018 AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 SUPERFAMILY SSF52518 371 573 9.47E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 541 7.7E-50 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 Gene3D G3DSA:3.40.50.970 2 178 1.5E-72 T 11-10-2018 AMC99_01048 7d1e5fe10e025e257b8d7e925b6481d4 581 SUPERFAMILY SSF52467 192 360 8.55E-63 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMC99_01360 bdf044b408a547b98068779fa424de80 169 Pfam PF02464 Competence-damaged protein 11 163 7.8E-35 T 11-10-2018 IPR008136 CinA, C-terminal AMC99_01360 bdf044b408a547b98068779fa424de80 169 SUPERFAMILY SSF142433 5 163 9.94E-35 T 11-10-2018 IPR036653 CinA-like, C-terminal AMC99_01360 bdf044b408a547b98068779fa424de80 169 Gene3D G3DSA:3.90.950.20 10 160 7.6E-27 T 11-10-2018 IPR036653 CinA-like, C-terminal AMC99_02480 8ddd07026a17d60b45e38bf34dffdf08 280 SUPERFAMILY SSF51261 79 274 2.79E-48 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_02480 8ddd07026a17d60b45e38bf34dffdf08 280 Pfam PF01551 Peptidase family M23 176 272 1.7E-26 T 11-10-2018 IPR016047 Peptidase M23 AMC99_02480 8ddd07026a17d60b45e38bf34dffdf08 280 Gene3D G3DSA:2.70.70.10 124 279 1.2E-42 T 11-10-2018 IPR011055 Duplicated hybrid motif AMC99_02246 7b7f7a453a78d52b3f1636e9fb167602 124 SUPERFAMILY SSF54593 3 123 8.94E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_02246 7b7f7a453a78d52b3f1636e9fb167602 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 116 1.1E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_02246 7b7f7a453a78d52b3f1636e9fb167602 124 Gene3D G3DSA:3.10.180.10 1 122 1.8E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_02056 8572ef87685edef13b8a805ee4b87cb9 363 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 335 3.3E-84 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMC99_02056 8572ef87685edef13b8a805ee4b87cb9 363 SUPERFAMILY SSF51395 4 362 3.67E-116 T 11-10-2018 AMC99_02056 8572ef87685edef13b8a805ee4b87cb9 363 Gene3D G3DSA:3.20.20.70 1 363 2.6E-129 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02801 eeca4015d5c37816b225444780ce1c2c 206 Pfam PF02517 CAAX protease self-immunity 96 198 8.2E-11 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMC99_02624 a81f1d8bd18e03d62f8a9e674179e98c 257 SUPERFAMILY SSF54506 9 252 5.23E-52 T 11-10-2018 AMC99_02624 a81f1d8bd18e03d62f8a9e674179e98c 257 Gene3D G3DSA:3.10.310.10 124 249 6.7E-28 T 11-10-2018 AMC99_02624 a81f1d8bd18e03d62f8a9e674179e98c 257 Gene3D G3DSA:3.10.310.10 8 123 1.4E-23 T 11-10-2018 AMC99_02624 a81f1d8bd18e03d62f8a9e674179e98c 257 PIRSF PIRSF016184 4 257 2.5E-34 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMC99_02624 a81f1d8bd18e03d62f8a9e674179e98c 257 Pfam PF02567 Phenazine biosynthesis-like protein 10 236 3.4E-31 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 AMC99_02705 34ce505b34428d77836fc4db20238067 233 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 221 4.6E-13 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AMC99_02705 34ce505b34428d77836fc4db20238067 233 Gene3D G3DSA:3.60.10.10 2 233 9.0E-41 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMC99_02705 34ce505b34428d77836fc4db20238067 233 SUPERFAMILY SSF56219 2 232 3.53E-37 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMC99_00599 745ee571d2bb08dd206a482a082234cd 446 Gene3D G3DSA:1.20.120.1630 284 426 1.8E-11 T 11-10-2018 AMC99_00599 745ee571d2bb08dd206a482a082234cd 446 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 312 402 3.4E-5 T 11-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 AMC99_02574 e0bcbe46d32ca8d4b96bccfedd2cb04e 68 Gene3D G3DSA:3.30.1200.10 1 68 7.7E-19 T 11-10-2018 IPR036591 YggU-like superfamily AMC99_02574 e0bcbe46d32ca8d4b96bccfedd2cb04e 68 SMART SM01152 2 68 1.8E-12 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AMC99_02574 e0bcbe46d32ca8d4b96bccfedd2cb04e 68 SUPERFAMILY SSF69786 2 67 1.57E-17 T 11-10-2018 IPR036591 YggU-like superfamily AMC99_02574 e0bcbe46d32ca8d4b96bccfedd2cb04e 68 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 2 66 7.0E-20 T 11-10-2018 IPR003746 Protein of unknown function DUF167 AMC99_00294 cc3650e8dd5e62f012b52431bc0d13c9 297 SUPERFAMILY SSF55021 200 291 3.79E-20 T 11-10-2018 AMC99_00294 cc3650e8dd5e62f012b52431bc0d13c9 297 Pfam PF00800 Prephenate dehydratase 27 200 1.5E-47 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMC99_00294 cc3650e8dd5e62f012b52431bc0d13c9 297 PIRSF PIRSF001500 11 294 9.3E-56 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMC99_00294 cc3650e8dd5e62f012b52431bc0d13c9 297 Gene3D G3DSA:3.30.70.260 207 295 4.3E-19 T 11-10-2018 AMC99_00294 cc3650e8dd5e62f012b52431bc0d13c9 297 SUPERFAMILY SSF53850 27 201 1.41E-50 T 11-10-2018 AMC99_00294 cc3650e8dd5e62f012b52431bc0d13c9 297 Gene3D G3DSA:3.40.190.10 106 187 2.2E-47 T 11-10-2018 AMC99_00294 cc3650e8dd5e62f012b52431bc0d13c9 297 Gene3D G3DSA:3.40.190.10 27 194 2.2E-47 T 11-10-2018 AMC99_00294 cc3650e8dd5e62f012b52431bc0d13c9 297 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 174 196 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 AMC99_01591 91699387972c4f8e31b5814c89cd0fe7 313 Gene3D G3DSA:3.40.250.10 100 255 8.2E-46 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_01591 91699387972c4f8e31b5814c89cd0fe7 313 Hamap MF_00469 UPF0176 protein YceA [yceA]. 5 259 44.51 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 AMC99_01591 91699387972c4f8e31b5814c89cd0fe7 313 SUPERFAMILY SSF52821 93 230 2.61E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AMC99_01591 91699387972c4f8e31b5814c89cd0fe7 313 Pfam PF00581 Rhodanese-like domain 122 215 1.4E-7 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_01591 91699387972c4f8e31b5814c89cd0fe7 313 Gene3D G3DSA:3.30.70.100 2 99 4.6E-32 T 11-10-2018 AMC99_01591 91699387972c4f8e31b5814c89cd0fe7 313 SMART SM00450 116 219 7.4E-18 T 11-10-2018 IPR001763 Rhodanese-like domain AMC99_02152 96d63cbf6b80d5486be71c8e4ea2fdbf 324 Pfam PF00589 Phage integrase family 148 304 7.3E-14 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMC99_02152 96d63cbf6b80d5486be71c8e4ea2fdbf 324 SUPERFAMILY SSF56349 33 314 7.36E-50 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMC99_02152 96d63cbf6b80d5486be71c8e4ea2fdbf 324 Gene3D G3DSA:1.10.150.130 33 117 9.5E-30 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AMC99_02152 96d63cbf6b80d5486be71c8e4ea2fdbf 324 Gene3D G3DSA:1.10.443.10 146 318 6.2E-15 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AMC99_02086 748e8888612197eb19538c2bb0941695 276 Gene3D G3DSA:3.40.50.150 1 276 1.8E-86 T 11-10-2018 AMC99_02086 748e8888612197eb19538c2bb0941695 276 SUPERFAMILY SSF53335 8 267 1.66E-72 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02086 748e8888612197eb19538c2bb0941695 276 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 262 36.107 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMC99_02086 748e8888612197eb19538c2bb0941695 276 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 274 2.7E-62 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 AMC99_02010 7b0e6cfdd97ed4981b3736834674e8bf 438 Pfam PF04235 Protein of unknown function (DUF418) 270 432 2.2E-40 T 11-10-2018 IPR007349 Domain of unknown function DUF418 AMC99_01554 3e602f42d78c0889130b6e64ab3fd14e 332 Gene3D G3DSA:3.10.620.30 166 330 4.3E-34 T 11-10-2018 AMC99_01554 3e602f42d78c0889130b6e64ab3fd14e 332 SUPERFAMILY SSF54001 194 309 6.87E-11 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily AMC99_01554 3e602f42d78c0889130b6e64ab3fd14e 332 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 194 293 4.7E-15 T 11-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted AMC99_00784 a96f098722820f81ac88d984ebfeb80d 430 Pfam PF04055 Radical SAM superfamily 106 280 1.7E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_00784 a96f098722820f81ac88d984ebfeb80d 430 SUPERFAMILY SSF102114 91 336 2.62E-25 T 11-10-2018 AMC99_00784 a96f098722820f81ac88d984ebfeb80d 430 SMART SM00729 99 325 1.0E-12 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_00784 a96f098722820f81ac88d984ebfeb80d 430 Gene3D G3DSA:3.20.20.70 91 352 2.9E-16 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02208 5e73fba7d53efef13710fd871f78c0a9 100 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 3 92 3.6E-12 T 11-10-2018 IPR013433 Putative polyhydroxyalkanoic acid system protein AMC99_01458 0c6447019f103a901d7fdb27e025c397 129 Pfam PF00072 Response regulator receiver domain 9 117 1.4E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01458 0c6447019f103a901d7fdb27e025c397 129 SMART SM00448 7 117 2.5E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_01458 0c6447019f103a901d7fdb27e025c397 129 Gene3D G3DSA:3.40.50.2300 1 128 5.7E-30 T 11-10-2018 AMC99_01458 0c6447019f103a901d7fdb27e025c397 129 SUPERFAMILY SSF52172 5 122 1.21E-29 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_00878 a4ec081146857c0315ac20797275a10e 73 Pfam PF09834 Predicted membrane protein (DUF2061) 15 65 3.1E-24 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane AMC99_01963 75e06d0e3d4972f7ed5ce5d6256c74fe 136 TIGRFAM TIGR00494 crcB: protein CrcB 12 131 8.6E-26 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMC99_01963 75e06d0e3d4972f7ed5ce5d6256c74fe 136 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 12 128 1.1E-22 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMC99_01963 75e06d0e3d4972f7ed5ce5d6256c74fe 136 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 10 133 18.567 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 AMC99_01330 f1272fca5965d33514565dee24f912d0 114 Pfam PF07238 PilZ domain 15 97 2.2E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMC99_01330 f1272fca5965d33514565dee24f912d0 114 SUPERFAMILY SSF141371 14 92 3.73E-7 T 11-10-2018 AMC99_01330 f1272fca5965d33514565dee24f912d0 114 Gene3D G3DSA:2.40.10.220 10 102 3.4E-6 T 11-10-2018 AMC99_00297 5338d5de12c31e5a12c4c6c57a322ca6 414 SUPERFAMILY SSF53067 90 207 8.29E-35 T 11-10-2018 AMC99_00297 5338d5de12c31e5a12c4c6c57a322ca6 414 Gene3D G3DSA:3.30.420.40 79 209 1.2E-39 T 11-10-2018 AMC99_00297 5338d5de12c31e5a12c4c6c57a322ca6 414 Gene3D G3DSA:3.30.420.150 210 405 1.5E-50 T 11-10-2018 AMC99_00297 5338d5de12c31e5a12c4c6c57a322ca6 414 Pfam PF02541 Ppx/GppA phosphatase family 104 402 1.2E-49 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 AMC99_00297 5338d5de12c31e5a12c4c6c57a322ca6 414 SUPERFAMILY SSF53067 214 402 2.59E-38 T 11-10-2018 AMC99_00860 832609158f87bb34057550d5854cad92 260 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 2 256 5.7E-70 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMC99_00860 832609158f87bb34057550d5854cad92 260 SMART SM00650 17 192 5.4E-66 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AMC99_00860 832609158f87bb34057550d5854cad92 260 Gene3D G3DSA:3.40.50.150 1 195 1.2E-61 T 11-10-2018 AMC99_00860 832609158f87bb34057550d5854cad92 260 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 60 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AMC99_00860 832609158f87bb34057550d5854cad92 260 Pfam PF00398 Ribosomal RNA adenine dimethylase 4 257 4.5E-45 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMC99_00860 832609158f87bb34057550d5854cad92 260 Gene3D G3DSA:1.10.8.100 196 260 3.2E-22 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AMC99_00860 832609158f87bb34057550d5854cad92 260 SUPERFAMILY SSF53335 3 257 9.4E-68 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00860 832609158f87bb34057550d5854cad92 260 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 1 258 49.647 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMC99_01709 5252a12cdc6190e108718efd207cfd0d 77 PIRSF PIRSF003113 1 77 5.7E-18 T 11-10-2018 IPR002634 BolA protein AMC99_01709 5252a12cdc6190e108718efd207cfd0d 77 Pfam PF01722 BolA-like protein 27 76 2.6E-14 T 11-10-2018 IPR002634 BolA protein AMC99_01709 5252a12cdc6190e108718efd207cfd0d 77 Gene3D G3DSA:3.30.300.90 3 76 4.3E-28 T 11-10-2018 AMC99_01709 5252a12cdc6190e108718efd207cfd0d 77 SUPERFAMILY SSF82657 1 76 7.19E-23 T 11-10-2018 IPR036065 BolA-like superfamily AMC99_01279 75438a246bda4f9a8be743fc5ad8961c 255 Pfam PF12804 MobA-like NTP transferase domain 10 132 1.2E-17 T 11-10-2018 IPR025877 MobA-like NTP transferase AMC99_01279 75438a246bda4f9a8be743fc5ad8961c 255 SUPERFAMILY SSF53448 7 245 6.34E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01279 75438a246bda4f9a8be743fc5ad8961c 255 Gene3D G3DSA:3.90.550.10 6 245 3.2E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00626 45790bc7db32d3073da1251d407a52d3 544 Gene3D G3DSA:2.30.30.300 192 237 9.4E-69 T 11-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 AMC99_00626 45790bc7db32d3073da1251d407a52d3 544 Gene3D G3DSA:1.10.10.350 447 539 3.1E-18 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_00626 45790bc7db32d3073da1251d407a52d3 544 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 56 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_00626 45790bc7db32d3073da1251d407a52d3 544 Pfam PF01921 tRNA synthetases class I (K) 14 374 3.7E-129 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMC99_00626 45790bc7db32d3073da1251d407a52d3 544 Gene3D G3DSA:3.40.50.620 34 290 9.4E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_00626 45790bc7db32d3073da1251d407a52d3 544 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 14 541 27.835 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMC99_00626 45790bc7db32d3073da1251d407a52d3 544 SUPERFAMILY SSF48163 341 541 1.83E-34 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AMC99_00626 45790bc7db32d3073da1251d407a52d3 544 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 43 538 4.9E-49 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMC99_00626 45790bc7db32d3073da1251d407a52d3 544 SUPERFAMILY SSF52374 15 332 5.63E-50 T 11-10-2018 AMC99_00566 9cab2a5c86db138e4d1d40f401ae28ff 316 PRINTS PR00412 Epoxide hydrolase signature 93 106 4.6E-27 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_00566 9cab2a5c86db138e4d1d40f401ae28ff 316 PRINTS PR00412 Epoxide hydrolase signature 107 120 4.6E-27 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_00566 9cab2a5c86db138e4d1d40f401ae28ff 316 PRINTS PR00412 Epoxide hydrolase signature 290 312 4.6E-27 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_00566 9cab2a5c86db138e4d1d40f401ae28ff 316 PRINTS PR00412 Epoxide hydrolase signature 46 61 4.6E-27 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_00566 9cab2a5c86db138e4d1d40f401ae28ff 316 PRINTS PR00412 Epoxide hydrolase signature 26 44 4.6E-27 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_00566 9cab2a5c86db138e4d1d40f401ae28ff 316 Pfam PF00561 alpha/beta hydrolase fold 20 300 4.0E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_00566 9cab2a5c86db138e4d1d40f401ae28ff 316 Gene3D G3DSA:3.40.50.1820 1 316 2.9E-83 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00566 9cab2a5c86db138e4d1d40f401ae28ff 316 SUPERFAMILY SSF53474 2 315 1.41E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00205 2f7dafba037709893b232aae188d7c26 138 SUPERFAMILY SSF53927 4 138 3.46E-40 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_00205 2f7dafba037709893b232aae188d7c26 138 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 101 2.2E-14 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AMC99_00205 2f7dafba037709893b232aae188d7c26 138 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 98 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMC99_00205 2f7dafba037709893b232aae188d7c26 138 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 9 136 8.6E-41 T 11-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 AMC99_00205 2f7dafba037709893b232aae188d7c26 138 Gene3D G3DSA:3.40.140.10 1 133 4.2E-47 T 11-10-2018 AMC99_00834 3ea0ca575a109eb95ce5476ddab5da8a 507 SUPERFAMILY SSF53300 118 498 1.71E-11 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily AMC99_00834 3ea0ca575a109eb95ce5476ddab5da8a 507 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 14 58 1.9E-13 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_00900 9b2da4274825c464720f179de0254925 246 Hamap MF_00258 Glutamate racemase [murI]. 1 239 24.917 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_00900 9b2da4274825c464720f179de0254925 246 Gene3D G3DSA:3.40.50.1860 1 215 1.9E-66 T 11-10-2018 AMC99_00900 9b2da4274825c464720f179de0254925 246 SUPERFAMILY SSF53681 1 90 4.38E-20 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_00900 9b2da4274825c464720f179de0254925 246 SUPERFAMILY SSF53681 92 242 3.27E-30 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_00900 9b2da4274825c464720f179de0254925 246 Pfam PF01177 Asp/Glu/Hydantoin racemase 13 202 2.2E-22 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_00900 9b2da4274825c464720f179de0254925 246 Gene3D G3DSA:3.40.50.1860 79 194 1.9E-66 T 11-10-2018 AMC99_00900 9b2da4274825c464720f179de0254925 246 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 167 177 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_00900 9b2da4274825c464720f179de0254925 246 TIGRFAM TIGR00067 glut_race: glutamate racemase 1 211 1.3E-48 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AMC99_00041 c92ab2d739b03d259401a5202353d43f 355 Pfam PF13365 Trypsin-like peptidase domain 34 188 1.1E-11 T 11-10-2018 AMC99_00041 c92ab2d739b03d259401a5202353d43f 355 SUPERFAMILY SSF50494 7 213 2.51E-15 T 11-10-2018 IPR009003 Peptidase S1, PA clan AMC99_00041 c92ab2d739b03d259401a5202353d43f 355 Gene3D G3DSA:2.40.10.120 3 224 8.8E-7 T 11-10-2018 AMC99_00537 9a08c64a587c758ca29a2ee0b9cfc619 222 Gene3D G3DSA:3.40.190.10 102 186 1.5E-63 T 11-10-2018 AMC99_00537 9a08c64a587c758ca29a2ee0b9cfc619 222 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 8 217 47.546 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 AMC99_00537 9a08c64a587c758ca29a2ee0b9cfc619 222 Pfam PF01634 ATP phosphoribosyltransferase 60 212 3.6E-46 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMC99_00537 9a08c64a587c758ca29a2ee0b9cfc619 222 SUPERFAMILY SSF53850 9 204 1.59E-59 T 11-10-2018 AMC99_00537 9a08c64a587c758ca29a2ee0b9cfc619 222 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 153 174 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 AMC99_00537 9a08c64a587c758ca29a2ee0b9cfc619 222 Gene3D G3DSA:3.40.190.10 10 202 1.5E-63 T 11-10-2018 AMC99_00537 9a08c64a587c758ca29a2ee0b9cfc619 222 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 9 194 1.9E-58 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 AMC99_00656 dad2d459ca8946df86c9965083985a72 190 Gene3D G3DSA:1.10.260.40 1 66 4.5E-15 T 11-10-2018 AMC99_00656 dad2d459ca8946df86c9965083985a72 190 Pfam PF01381 Helix-turn-helix 5 60 4.5E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_00656 dad2d459ca8946df86c9965083985a72 190 SMART SM00530 4 61 2.6E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_00656 dad2d459ca8946df86c9965083985a72 190 SUPERFAMILY SSF47413 3 69 1.33E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_00186 a954b743b1de4e9300c1a4dc415b076d 148 SUPERFAMILY SSF53756 4 137 1.63E-5 T 11-10-2018 AMC99_00186 a954b743b1de4e9300c1a4dc415b076d 148 Pfam PF08660 Oligosaccharide biosynthesis protein Alg14 like 54 137 3.8E-12 T 11-10-2018 IPR013969 Oligosaccharide biosynthesis protein Alg14-like GO:0006488 Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMC99_00186 a954b743b1de4e9300c1a4dc415b076d 148 Gene3D G3DSA:3.40.50.2000 5 134 3.7E-7 T 11-10-2018 AMC99_00377 de139affb0f9b2269f9902702b91958b 365 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 167 182 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMC99_00377 de139affb0f9b2269f9902702b91958b 365 Pfam PF00494 Squalene/phytoene synthase 50 312 2.5E-58 T 11-10-2018 AMC99_00377 de139affb0f9b2269f9902702b91958b 365 Gene3D G3DSA:1.10.600.10 41 324 1.7E-68 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMC99_00377 de139affb0f9b2269f9902702b91958b 365 SUPERFAMILY SSF48576 46 325 5.32E-73 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMC99_00377 de139affb0f9b2269f9902702b91958b 365 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 199 224 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 AMC99_01154 bb5d1e9e5e3b9aad00f3f4c74b0faf4a 387 Pfam PF01231 Indoleamine 2,3-dioxygenase 3 382 3.6E-72 T 11-10-2018 IPR000898 Indoleamine 2,3-dioxygenase GO:0020037 Reactome: R-HSA-71240 AMC99_01154 bb5d1e9e5e3b9aad00f3f4c74b0faf4a 387 Gene3D G3DSA:1.20.58.480 121 236 6.9E-12 T 11-10-2018 AMC99_01154 bb5d1e9e5e3b9aad00f3f4c74b0faf4a 387 Gene3D G3DSA:1.20.58.480 242 387 1.8E-34 T 11-10-2018 AMC99_01154 bb5d1e9e5e3b9aad00f3f4c74b0faf4a 387 SUPERFAMILY SSF140959 4 384 7.46E-105 T 11-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 AMC99_01499 eee66ae61cb9842241add0177ae7953d 246 SMART SM00382 27 208 1.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_01499 eee66ae61cb9842241add0177ae7953d 246 SUPERFAMILY SSF52540 3 221 4.82E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01499 eee66ae61cb9842241add0177ae7953d 246 Gene3D G3DSA:3.40.50.300 1 236 3.6E-63 T 11-10-2018 AMC99_01499 eee66ae61cb9842241add0177ae7953d 246 Pfam PF00005 ABC transporter 18 159 1.9E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_00810 c4ff5079a245c88584895519dbbf9e4d 187 Gene3D G3DSA:1.10.150.20 109 174 2.8E-5 T 11-10-2018 AMC99_01310 fb0169a87b12caba96f6adeff6ed41bd 619 SUPERFAMILY SSF143975 4 420 2.48E-135 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_01310 fb0169a87b12caba96f6adeff6ed41bd 619 SUPERFAMILY SSF52016 421 614 7.85E-60 T 11-10-2018 AMC99_01310 fb0169a87b12caba96f6adeff6ed41bd 619 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_01310 fb0169a87b12caba96f6adeff6ed41bd 619 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 611 2.2E-251 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_01310 fb0169a87b12caba96f6adeff6ed41bd 619 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 611 45.053 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_01310 fb0169a87b12caba96f6adeff6ed41bd 619 Gene3D G3DSA:3.50.30.80 421 572 2.9E-54 T 11-10-2018 AMC99_01310 fb0169a87b12caba96f6adeff6ed41bd 619 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_01310 fb0169a87b12caba96f6adeff6ed41bd 619 Pfam PF00920 Dehydratase family 34 608 4.5E-221 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_01103 871ad6069da31966fa9c740937fe3518 267 Pfam PF06724 Domain of Unknown Function (DUF1206) 184 251 9.6E-10 T 11-10-2018 IPR009597 Domain of unknown function DUF1206 AMC99_01103 871ad6069da31966fa9c740937fe3518 267 Pfam PF06724 Domain of Unknown Function (DUF1206) 14 78 2.6E-10 T 11-10-2018 IPR009597 Domain of unknown function DUF1206 AMC99_01103 871ad6069da31966fa9c740937fe3518 267 Pfam PF06724 Domain of Unknown Function (DUF1206) 94 163 1.3E-8 T 11-10-2018 IPR009597 Domain of unknown function DUF1206 AMC99_00896 9af7a28da65a7632639c6dade86a0701 231 Gene3D G3DSA:3.40.109.10 3 225 5.3E-55 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMC99_00896 9af7a28da65a7632639c6dade86a0701 231 Pfam PF00881 Nitroreductase family 14 204 1.9E-34 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 AMC99_00896 9af7a28da65a7632639c6dade86a0701 231 SUPERFAMILY SSF55469 10 224 4.84E-41 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 AMC99_01583 8e2ce444308cfe4c4931b1c798571d48 379 SUPERFAMILY SSF53448 21 189 5.69E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01583 8e2ce444308cfe4c4931b1c798571d48 379 Pfam PF00535 Glycosyl transferase family 2 23 167 9.1E-26 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMC99_01583 8e2ce444308cfe4c4931b1c798571d48 379 Pfam PF04138 GtrA-like protein 259 376 2.8E-18 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 AMC99_01583 8e2ce444308cfe4c4931b1c798571d48 379 Gene3D G3DSA:3.90.550.10 4 263 3.8E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00828 952cde96270e207ebf58165679934fcc 240 SUPERFAMILY SSF56235 3 236 1.34E-36 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_00828 952cde96270e207ebf58165679934fcc 240 PIRSF PIRSF009120 1 240 3.4E-89 T 11-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 AMC99_00828 952cde96270e207ebf58165679934fcc 240 Pfam PF00227 Proteasome subunit 5 180 1.2E-8 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AMC99_00828 952cde96270e207ebf58165679934fcc 240 Gene3D G3DSA:3.60.20.10 1 226 4.7E-28 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_01001 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Gene3D G3DSA:3.20.20.60 412 530 1.8E-19 T 11-10-2018 AMC99_01001 7afc60bf33a75ab6cdda3ebf3427a5cc 532 SUPERFAMILY SSF51621 4 513 2.11E-123 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AMC99_01001 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Pfam PF00463 Isocitrate lyase family 97 268 4.8E-22 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMC99_01001 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Pfam PF00463 Isocitrate lyase family 320 390 3.5E-10 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMC99_01001 7afc60bf33a75ab6cdda3ebf3427a5cc 532 Pfam PF00463 Isocitrate lyase family 423 529 1.8E-12 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMC99_01001 7afc60bf33a75ab6cdda3ebf3427a5cc 532 PIRSF PIRSF001362 418 531 1.3E-5 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMC99_01001 7afc60bf33a75ab6cdda3ebf3427a5cc 532 PIRSF PIRSF001362 291 406 6.6E-12 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMC99_01001 7afc60bf33a75ab6cdda3ebf3427a5cc 532 PIRSF PIRSF001362 2 277 2.1E-30 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 Pfam PF02803 Thiolase, C-terminal domain 276 396 3.1E-45 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 Gene3D G3DSA:3.40.47.10 12 281 9.7E-138 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 SUPERFAMILY SSF53901 276 397 2.56E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 396 1.1E-123 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 Pfam PF00108 Thiolase, N-terminal domain 10 267 3.6E-79 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 ProSitePatterns PS00099 Thiolases active site. 379 392 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 90 108 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 Gene3D G3DSA:3.40.47.10 132 394 9.7E-138 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 SUPERFAMILY SSF53901 10 274 7.27E-71 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01263 dbc0e46d6621e5a50c843a6497884e79 399 PIRSF PIRSF000429 5 399 3.1E-113 T 11-10-2018 IPR002155 Thiolase GO:0016747 AMC99_01802 c58a067d9a1d1838a155d5d6f119d519 143 Pfam PF03734 L,D-transpeptidase catalytic domain 7 141 2.7E-20 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 AMC99_01802 c58a067d9a1d1838a155d5d6f119d519 143 Gene3D G3DSA:2.40.440.10 2 143 4.9E-16 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_01802 c58a067d9a1d1838a155d5d6f119d519 143 SUPERFAMILY SSF141523 8 141 8.63E-23 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like AMC99_02242 901a850adaff2aebcc56478c33ab5df4 136 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 9 133 36.742 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMC99_02242 901a850adaff2aebcc56478c33ab5df4 136 SUPERFAMILY SSF51316 7 134 3.03E-59 T 11-10-2018 IPR011057 Mss4-like superfamily AMC99_02242 901a850adaff2aebcc56478c33ab5df4 136 Gene3D G3DSA:2.170.150.20 1 136 1.6E-63 T 11-10-2018 AMC99_02242 901a850adaff2aebcc56478c33ab5df4 136 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 9 134 1.1E-55 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMC99_02242 901a850adaff2aebcc56478c33ab5df4 136 Pfam PF01641 SelR domain 12 132 1.5E-56 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 AMC99_01421 e86a17ef63c1e03965f9586554070dcd 208 Pfam PF02224 Cytidylate kinase 3 201 1.1E-48 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMC99_01421 e86a17ef63c1e03965f9586554070dcd 208 SUPERFAMILY SSF52540 1 204 8.34E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01421 e86a17ef63c1e03965f9586554070dcd 208 Gene3D G3DSA:3.40.50.300 1 208 4.5E-61 T 11-10-2018 AMC99_01421 e86a17ef63c1e03965f9586554070dcd 208 Hamap MF_00238 Cytidylate kinase [cmk]. 1 205 29.448 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AMC99_01514 c8d0ba6c7f4eff3b5b32caee19f8d7be 450 Pfam PF00144 Beta-lactamase 47 338 6.8E-72 T 11-10-2018 IPR001466 Beta-lactamase-related AMC99_01514 c8d0ba6c7f4eff3b5b32caee19f8d7be 450 Pfam PF11954 Domain of unknown function (DUF3471) 360 438 1.9E-10 T 11-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal AMC99_01514 c8d0ba6c7f4eff3b5b32caee19f8d7be 450 Gene3D G3DSA:3.40.710.10 31 344 5.3E-97 T 11-10-2018 AMC99_01514 c8d0ba6c7f4eff3b5b32caee19f8d7be 450 SUPERFAMILY SSF56601 28 351 9.24E-95 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_02648 e80f5870f97f58823020ef08e889b275 409 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 50 384 1.8E-64 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AMC99_02648 e80f5870f97f58823020ef08e889b275 409 Gene3D G3DSA:3.20.20.140 48 391 2.3E-92 T 11-10-2018 AMC99_02648 e80f5870f97f58823020ef08e889b275 409 SUPERFAMILY SSF51556 43 387 5.04E-70 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_02455 f497325b0b36db4ae3a1e09dabca902f 504 Pfam PF04820 Tryptophan halogenase 13 462 1.2E-186 T 11-10-2018 IPR006905 Flavin-dependent halogenase AMC99_02455 f497325b0b36db4ae3a1e09dabca902f 504 SUPERFAMILY SSF51905 9 424 2.24E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02455 f497325b0b36db4ae3a1e09dabca902f 504 PIRSF PIRSF011396 6 500 9.9E-197 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase AMC99_02455 f497325b0b36db4ae3a1e09dabca902f 504 Gene3D G3DSA:3.50.50.60 7 497 8.8E-186 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_02166 5a3841cf46724889a2f74865e33689f1 187 Gene3D G3DSA:1.20.1260.10 98 177 1.0E-10 T 11-10-2018 IPR012347 Ferritin-like AMC99_02166 5a3841cf46724889a2f74865e33689f1 187 Pfam PF03713 Domain of unknown function (DUF305) 101 162 1.9E-10 T 11-10-2018 IPR005183 Domain of unknown function DUF305 AMC99_01515 2d9409f4c10d72f2ea0e5d616788d2be 448 Gene3D G3DSA:3.90.1300.10 6 447 8.6E-111 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_01515 2d9409f4c10d72f2ea0e5d616788d2be 448 SUPERFAMILY SSF75304 11 445 1.44E-108 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_01515 2d9409f4c10d72f2ea0e5d616788d2be 448 Pfam PF01425 Amidase 28 311 5.5E-75 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_01515 2d9409f4c10d72f2ea0e5d616788d2be 448 Pfam PF01425 Amidase 341 434 1.1E-6 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMC99_02150 7f35541b645e01e71c23b7d03b4ae0c9 263 Pfam PF06577 Protein of unknown function (DUF1134) 105 263 5.5E-69 T 11-10-2018 IPR008325 Uncharacterised conserved protein UCP033924 AMC99_01839 62485eb3506db92084dfead20656bf2c 376 SUPERFAMILY SSF53383 16 371 2.25E-95 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_01839 62485eb3506db92084dfead20656bf2c 376 Gene3D G3DSA:3.40.640.10 1 235 4.4E-66 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_01839 62485eb3506db92084dfead20656bf2c 376 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 2 370 6.6E-95 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_01839 62485eb3506db92084dfead20656bf2c 376 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 2 372 2.1E-121 T 11-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 AMC99_01839 62485eb3506db92084dfead20656bf2c 376 PIRSF PIRSF001434 1 374 1.0E-109 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_01839 62485eb3506db92084dfead20656bf2c 376 Gene3D G3DSA:3.90.1150.10 236 373 3.7E-41 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_00749 53f3bdf887b26f7617ef8a88b84df8f3 261 Gene3D G3DSA:3.90.226.10 1 261 2.7E-72 T 11-10-2018 AMC99_00749 53f3bdf887b26f7617ef8a88b84df8f3 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 248 2.4E-41 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_00749 53f3bdf887b26f7617ef8a88b84df8f3 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMC99_00749 53f3bdf887b26f7617ef8a88b84df8f3 261 SUPERFAMILY SSF52096 1 255 2.67E-60 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_01217 2852de44bc729c743d6d71dd48cd662c 272 Gene3D G3DSA:3.60.110.10 1 270 4.5E-88 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_01217 2852de44bc729c743d6d71dd48cd662c 272 SUPERFAMILY SSF56317 3 267 1.24E-76 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AMC99_01217 2852de44bc729c743d6d71dd48cd662c 272 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 151 171 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site AMC99_01217 2852de44bc729c743d6d71dd48cd662c 272 Pfam PF00795 Carbon-nitrogen hydrolase 3 259 1.6E-49 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AMC99_01119 e3bab5ea01ca98353cf2ba0d665641c2 119 SUPERFAMILY SSF141734 10 115 1.26E-44 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AMC99_01119 e3bab5ea01ca98353cf2ba0d665641c2 119 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 109 6.0E-17 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMC99_01119 e3bab5ea01ca98353cf2ba0d665641c2 119 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 106 1.5E-33 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMC99_01119 e3bab5ea01ca98353cf2ba0d665641c2 119 Gene3D G3DSA:3.10.20.400 2 97 1.4E-36 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 AMC99_01119 e3bab5ea01ca98353cf2ba0d665641c2 119 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 7 110 28.613 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 AMC99_00074 9fcd06dd9a17055e7ac21b3c2198f554 847 Gene3D G3DSA:3.40.50.300 465 784 3.8E-49 T 11-10-2018 AMC99_00074 9fcd06dd9a17055e7ac21b3c2198f554 847 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 33 279 3.1E-53 T 11-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase AMC99_00074 9fcd06dd9a17055e7ac21b3c2198f554 847 SMART SM00382 477 775 2.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00074 9fcd06dd9a17055e7ac21b3c2198f554 847 SUPERFAMILY SSF52540 430 819 1.76E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00074 9fcd06dd9a17055e7ac21b3c2198f554 847 Gene3D G3DSA:1.10.8.730 530 653 3.8E-49 T 11-10-2018 AMC99_00074 9fcd06dd9a17055e7ac21b3c2198f554 847 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 38 843 1.3E-183 T 11-10-2018 IPR014117 Type-IV secretion system protein TraC AMC99_00074 9fcd06dd9a17055e7ac21b3c2198f554 847 Pfam PF12846 AAA-like domain 478 738 1.9E-12 T 11-10-2018 AMC99_00178 075aaafd7547827fdadf8b9570b0070f 296 SUPERFAMILY SSF53448 1 260 1.21E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00178 075aaafd7547827fdadf8b9570b0070f 296 Gene3D G3DSA:3.90.550.10 1 231 5.7E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00178 075aaafd7547827fdadf8b9570b0070f 296 Pfam PF00535 Glycosyl transferase family 2 1 120 8.2E-17 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMC99_01069 622a9599a02ed8174047121e6f14d3d3 103 Gene3D G3DSA:1.20.59.10 6 103 3.2E-26 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMC99_01069 622a9599a02ed8174047121e6f14d3d3 103 SMART SM00830 18 97 1.1E-19 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMC99_01069 622a9599a02ed8174047121e6f14d3d3 103 SUPERFAMILY SSF48600 8 95 5.04E-21 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMC99_01069 622a9599a02ed8174047121e6f14d3d3 103 Pfam PF01817 Chorismate mutase type II 18 94 2.2E-14 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMC99_01069 622a9599a02ed8174047121e6f14d3d3 103 PIRSF PIRSF029775 2 103 6.4E-35 T 11-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 AMC99_01409 ad0ac3008468b29b8b7460e758e28a1f 750 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 146 461 1.7E-61 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 AMC99_01409 ad0ac3008468b29b8b7460e758e28a1f 750 Gene3D G3DSA:2.140.10.30 31 492 6.7E-127 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily AMC99_01409 ad0ac3008468b29b8b7460e758e28a1f 750 Pfam PF00326 Prolyl oligopeptidase family 551 744 1.2E-50 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_01409 ad0ac3008468b29b8b7460e758e28a1f 750 SUPERFAMILY SSF53474 498 744 7.36E-66 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01409 ad0ac3008468b29b8b7460e758e28a1f 750 Gene3D G3DSA:3.40.50.1820 500 745 2.7E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01409 ad0ac3008468b29b8b7460e758e28a1f 750 SUPERFAMILY SSF82171 31 484 6.8E-47 T 11-10-2018 AMC99_02447 0b1a45756af38cca32858a8b0a6e3d01 183 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 68 176 1.6E-24 T 11-10-2018 IPR018673 Protein of unknown function DUF2141 AMC99_00955 864e2cfac725b4d2800000e0b6128cef 408 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 36 408 3.3E-111 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMC99_00955 864e2cfac725b4d2800000e0b6128cef 408 Gene3D G3DSA:3.10.20.340 280 408 3.3E-45 T 11-10-2018 AMC99_00955 864e2cfac725b4d2800000e0b6128cef 408 SUPERFAMILY SSF56266 18 405 5.1E-133 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMC99_00955 864e2cfac725b4d2800000e0b6128cef 408 Gene3D G3DSA:3.60.70.12 14 279 6.8E-81 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMC99_00955 864e2cfac725b4d2800000e0b6128cef 408 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 26 406 5.0E-149 T 11-10-2018 AMC99_00955 864e2cfac725b4d2800000e0b6128cef 408 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 408 143.418 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMC99_00955 864e2cfac725b4d2800000e0b6128cef 408 Pfam PF01960 ArgJ family 26 408 3.7E-134 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 AMC99_00470 c5c7c04880a9fc726b983e70f0cbebf8 278 Gene3D G3DSA:1.10.357.10 75 275 9.2E-16 T 11-10-2018 AMC99_00470 c5c7c04880a9fc726b983e70f0cbebf8 278 SUPERFAMILY SSF46689 78 151 4.14E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01636 33bfb613d54f03d5841d5a9deb13524b 132 Gene3D G3DSA:1.20.120.550 4 132 4.6E-22 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMC99_01636 33bfb613d54f03d5841d5a9deb13524b 132 SUPERFAMILY SSF161084 6 126 3.01E-25 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily AMC99_01636 33bfb613d54f03d5841d5a9deb13524b 132 Pfam PF01124 MAPEG family 11 125 3.6E-24 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein AMC99_01669 6724056220852752c3e557734ee6e803 716 Gene3D G3DSA:2.130.10.120 91 444 1.2E-139 T 11-10-2018 AMC99_01669 6724056220852752c3e557734ee6e803 716 SUPERFAMILY SSF53474 453 693 4.01E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01669 6724056220852752c3e557734ee6e803 716 Gene3D G3DSA:3.40.50.1820 41 671 1.2E-139 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01669 6724056220852752c3e557734ee6e803 716 Pfam PF00326 Prolyl oligopeptidase family 508 707 1.3E-44 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_01669 6724056220852752c3e557734ee6e803 716 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 39 437 3.2E-40 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 AMC99_01669 6724056220852752c3e557734ee6e803 716 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 511 535 4.5E-43 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_01669 6724056220852752c3e557734ee6e803 716 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 4.5E-43 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_01669 6724056220852752c3e557734ee6e803 716 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 569 589 4.5E-43 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_01669 6724056220852752c3e557734ee6e803 716 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 4.5E-43 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_01669 6724056220852752c3e557734ee6e803 716 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 4.5E-43 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_01669 6724056220852752c3e557734ee6e803 716 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 539 558 4.5E-43 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 AMC99_01669 6724056220852752c3e557734ee6e803 716 SUPERFAMILY SSF50993 40 448 1.96E-52 T 11-10-2018 AMC99_00438 c75c02e5d3afcfe0b4300ae6536f8ab1 233 TIGRFAM TIGR02796 tolQ: protein TolQ 19 228 9.1E-76 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 AMC99_00438 c75c02e5d3afcfe0b4300ae6536f8ab1 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 87 216 4.4E-40 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AMC99_02332 9c8b54a75abd5f685bf8e7d5b63ddb32 177 Gene3D G3DSA:3.20.20.70 4 175 3.6E-25 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02332 9c8b54a75abd5f685bf8e7d5b63ddb32 177 Pfam PF02581 Thiamine monophosphate synthase 20 165 2.1E-17 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMC99_02332 9c8b54a75abd5f685bf8e7d5b63ddb32 177 SUPERFAMILY SSF51391 7 164 5.23E-23 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 Pfam PF01612 3'-5' exonuclease 7 173 1.1E-34 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 Pfam PF00570 HRDC domain 216 282 2.6E-16 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 SUPERFAMILY SSF47819 195 301 3.92E-23 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 Gene3D G3DSA:1.10.150.80 198 297 2.5E-18 T 11-10-2018 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 TIGRFAM TIGR01388 rnd: ribonuclease D 6 369 7.0E-111 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 Hamap MF_01899 Ribonuclease D [rnd]. 4 369 41.164 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 SUPERFAMILY SSF47819 310 371 4.14E-9 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 Gene3D G3DSA:3.30.420.10 3 195 3.0E-58 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 SUPERFAMILY SSF53098 6 208 5.44E-60 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 SMART SM00341 212 293 1.5E-7 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 AMC99_00723 47d0b9f4b9fa84e9b14b9975fbec108b 398 SMART SM00474 4 174 3.5E-33 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AMC99_02133 fe9ff5d8a732ec43ab292ce679f02884 172 Gene3D G3DSA:2.40.50.140 2 115 4.9E-46 T 11-10-2018 AMC99_02133 fe9ff5d8a732ec43ab292ce679f02884 172 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 172 1.6E-45 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMC99_02133 fe9ff5d8a732ec43ab292ce679f02884 172 SUPERFAMILY SSF50249 4 172 4.46E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_02133 fe9ff5d8a732ec43ab292ce679f02884 172 Pfam PF00436 Single-strand binding protein family 5 105 6.4E-37 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AMC99_02133 fe9ff5d8a732ec43ab292ce679f02884 172 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 34.356 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AMC99_02433 6a2dcbba0c1094c8aceb56c443e305e4 111 SUPERFAMILY SSF46785 3 79 1.73E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_02433 6a2dcbba0c1094c8aceb56c443e305e4 111 SMART SM00345 9 68 8.9E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMC99_02433 6a2dcbba0c1094c8aceb56c443e305e4 111 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.3E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMC99_02433 6a2dcbba0c1094c8aceb56c443e305e4 111 Gene3D G3DSA:1.10.10.10 2 110 8.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00299 08c833f48b3bf3df461823cc343de92f 362 SUPERFAMILY SSF159245 13 234 1.83E-12 T 11-10-2018 AMC99_00719 7fdcb76b28d29c0395b12bd43e7d03d9 197 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 191 6.3E-35 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMC99_00719 7fdcb76b28d29c0395b12bd43e7d03d9 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 4.4E-14 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_00719 7fdcb76b28d29c0395b12bd43e7d03d9 197 PIRSF PIRSF000847 1 197 7.8E-36 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AMC99_00719 7fdcb76b28d29c0395b12bd43e7d03d9 197 Gene3D G3DSA:1.20.120.1760 2 191 4.9E-13 T 11-10-2018 AMC99_00719 7fdcb76b28d29c0395b12bd43e7d03d9 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMC99_00059 68a78f9fa6f57bc2e506a05acccf80ac 160 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 105 2.5E-41 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMC99_00059 68a78f9fa6f57bc2e506a05acccf80ac 160 SUPERFAMILY SSF52980 1 138 3.22E-49 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMC99_00059 68a78f9fa6f57bc2e506a05acccf80ac 160 Pfam PF03852 DNA mismatch endonuclease Vsr 1 61 6.8E-27 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMC99_00059 68a78f9fa6f57bc2e506a05acccf80ac 160 PIRSF PIRSF018267 1 129 1.9E-47 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMC99_00059 68a78f9fa6f57bc2e506a05acccf80ac 160 Gene3D G3DSA:3.40.960.10 8 143 2.5E-49 T 11-10-2018 AMC99_00152 7be7cf805f86316c9ab1d25cde9bb6f1 291 PIRSF PIRSF000103 1 291 1.9E-80 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMC99_00152 7be7cf805f86316c9ab1d25cde9bb6f1 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 289 2.4E-39 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 AMC99_00152 7be7cf805f86316c9ab1d25cde9bb6f1 291 Gene3D G3DSA:1.10.1040.10 162 291 1.4E-45 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMC99_00152 7be7cf805f86316c9ab1d25cde9bb6f1 291 Gene3D G3DSA:3.40.50.720 1 161 5.3E-50 T 11-10-2018 AMC99_00152 7be7cf805f86316c9ab1d25cde9bb6f1 291 SUPERFAMILY SSF48179 160 290 3.23E-42 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_00152 7be7cf805f86316c9ab1d25cde9bb6f1 291 SUPERFAMILY SSF51735 1 159 1.4E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00152 7be7cf805f86316c9ab1d25cde9bb6f1 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 159 4.1E-46 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 AMC99_00152 7be7cf805f86316c9ab1d25cde9bb6f1 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 AMC99_00152 7be7cf805f86316c9ab1d25cde9bb6f1 291 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 290 6.5E-120 T 11-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 AMC99_00076 c3ab989e30472182425f64daee5f7fb1 290 Pfam PF10411 Disulfide bond isomerase protein N-terminus 51 103 2.2E-14 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AMC99_00076 c3ab989e30472182425f64daee5f7fb1 290 SUPERFAMILY SSF52833 145 284 3.16E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00076 c3ab989e30472182425f64daee5f7fb1 290 Pfam PF13098 Thioredoxin-like domain 167 278 4.0E-12 T 11-10-2018 IPR012336 Thioredoxin-like fold AMC99_00076 c3ab989e30472182425f64daee5f7fb1 290 Gene3D G3DSA:3.40.30.10 156 284 1.9E-25 T 11-10-2018 AMC99_00076 c3ab989e30472182425f64daee5f7fb1 290 SUPERFAMILY SSF54423 48 105 2.55E-10 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 SUPERFAMILY SSF56655 5 255 1.7E-75 T 11-10-2018 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 Gene3D G3DSA:3.40.190.80 139 256 5.2E-29 T 11-10-2018 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 Gene3D G3DSA:3.30.540.10 2 137 1.6E-42 T 11-10-2018 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 7 255 3.2E-86 T 11-10-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 204 228 1.6E-24 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 128 151 1.6E-24 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 1.6E-24 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 1.6E-24 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 1.6E-24 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02691 c93fd660d7098205c9b50fd8be926209 276 Pfam PF00459 Inositol monophosphatase family 4 241 8.4E-52 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AMC99_02644 00947f27d4e535e360550278b9fa9acc 136 Pfam PF11233 Protein of unknown function (DUF3035) 26 128 4.4E-17 T 11-10-2018 IPR021395 Protein of unknown function DUF3035 AMC99_01753 ef146a87350dcd07c96a0f499ec0dd7a 371 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 100 115 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_01753 ef146a87350dcd07c96a0f499ec0dd7a 371 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 135 148 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_01753 ef146a87350dcd07c96a0f499ec0dd7a 371 SUPERFAMILY SSF51717 88 359 1.83E-88 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_01753 ef146a87350dcd07c96a0f499ec0dd7a 371 Pfam PF00809 Pterin binding enzyme 101 342 4.2E-69 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_01753 ef146a87350dcd07c96a0f499ec0dd7a 371 Gene3D G3DSA:3.20.20.20 78 363 1.3E-93 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AMC99_01753 ef146a87350dcd07c96a0f499ec0dd7a 371 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 99 355 4.3E-84 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AMC99_00311 6a6e866a59fcf514a0b2dba787f52800 264 SUPERFAMILY SSF88659 88 135 1.64E-5 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AMC99_00311 6a6e866a59fcf514a0b2dba787f52800 264 PIRSF PIRSF036400 1 263 1.4E-107 T 11-10-2018 IPR014605 Signal transduction response regulator PhyR-like, alphaproteobacteria AMC99_00311 6a6e866a59fcf514a0b2dba787f52800 264 SMART SM00448 141 251 3.7E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00311 6a6e866a59fcf514a0b2dba787f52800 264 Pfam PF00072 Response regulator receiver domain 143 251 8.2E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00311 6a6e866a59fcf514a0b2dba787f52800 264 SUPERFAMILY SSF52172 142 255 1.85E-21 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_00311 6a6e866a59fcf514a0b2dba787f52800 264 Gene3D G3DSA:1.20.140.160 1 139 3.2E-42 T 11-10-2018 AMC99_00311 6a6e866a59fcf514a0b2dba787f52800 264 Gene3D G3DSA:3.40.50.2300 140 261 1.2E-29 T 11-10-2018 AMC99_01883 cfa82debcc4c5dba6fa8aaad6231827f 445 Gene3D G3DSA:1.20.1740.10 8 441 2.6E-71 T 11-10-2018 AMC99_01883 cfa82debcc4c5dba6fa8aaad6231827f 445 Pfam PF13520 Amino acid permease 18 423 1.7E-47 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_01883 cfa82debcc4c5dba6fa8aaad6231827f 445 PIRSF PIRSF006060 1 444 1.8E-66 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_02755 966d7e61746225f4c0240348339fd4a6 289 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 181 1.8E-59 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMC99_02755 966d7e61746225f4c0240348339fd4a6 289 Gene3D G3DSA:1.10.1040.50 187 289 2.0E-32 T 11-10-2018 AMC99_02755 966d7e61746225f4c0240348339fd4a6 289 PIRSF PIRSF000105 1 289 3.0E-81 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 AMC99_02755 966d7e61746225f4c0240348339fd4a6 289 Gene3D G3DSA:3.40.50.720 1 186 9.9E-66 T 11-10-2018 AMC99_02755 966d7e61746225f4c0240348339fd4a6 289 SUPERFAMILY SSF48179 183 284 1.11E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_02755 966d7e61746225f4c0240348339fd4a6 289 SUPERFAMILY SSF51735 1 183 2.19E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02755 966d7e61746225f4c0240348339fd4a6 289 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 280 4.9E-33 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 AMC99_00593 de0b556e6ff600b188a1695e2ed94fb5 471 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 229 236 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 AMC99_00593 de0b556e6ff600b188a1695e2ed94fb5 471 Gene3D G3DSA:3.40.605.10 8 435 1.8E-123 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_00593 de0b556e6ff600b188a1695e2ed94fb5 471 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 AMC99_00593 de0b556e6ff600b188a1695e2ed94fb5 471 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 459 1.8E-180 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 AMC99_00593 de0b556e6ff600b188a1695e2ed94fb5 471 SUPERFAMILY SSF53720 9 441 4.58E-110 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_00593 de0b556e6ff600b188a1695e2ed94fb5 471 Gene3D G3DSA:3.40.309.10 234 423 1.8E-123 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_00593 de0b556e6ff600b188a1695e2ed94fb5 471 Pfam PF00171 Aldehyde dehydrogenase family 19 446 3.0E-108 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_01199 42b65e7606b51690ca1f79ce1cc2b802 437 SUPERFAMILY SSF48452 148 412 8.04E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01045 c4d11623d7f4f22f0a744eaa3e6731c0 218 Pfam PF04264 YceI-like domain 47 214 7.7E-29 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMC99_01045 c4d11623d7f4f22f0a744eaa3e6731c0 218 Gene3D G3DSA:2.40.128.110 45 218 8.6E-40 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMC99_01045 c4d11623d7f4f22f0a744eaa3e6731c0 218 SUPERFAMILY SSF101874 44 217 1.06E-40 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMC99_01045 c4d11623d7f4f22f0a744eaa3e6731c0 218 SMART SM00867 46 216 7.0E-51 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMC99_00447 ed443d684629713d671847780954ef0b 436 Gene3D G3DSA:3.90.1150.10 301 436 2.2E-46 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_00447 ed443d684629713d671847780954ef0b 436 PIRSF PIRSF001434 18 436 5.4E-118 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_00447 ed443d684629713d671847780954ef0b 436 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 243 257 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_00447 ed443d684629713d671847780954ef0b 436 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 39 433 1.7E-105 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AMC99_00447 ed443d684629713d671847780954ef0b 436 SUPERFAMILY SSF53383 77 435 7.79E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_00447 ed443d684629713d671847780954ef0b 436 Gene3D G3DSA:3.40.640.10 26 299 5.4E-68 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_00941 321a4f082a3e6acbc730467c5ab47780 163 Gene3D G3DSA:1.20.120.520 1 146 2.6E-14 T 11-10-2018 AMC99_00941 321a4f082a3e6acbc730467c5ab47780 163 Pfam PF01814 Hemerythrin HHE cation binding domain 7 122 9.0E-16 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMC99_01874 74900a3015b0f00aa9bc9dd5a0b56a35 147 SUPERFAMILY SSF89447 2 128 1.57E-14 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily AMC99_01874 74900a3015b0f00aa9bc9dd5a0b56a35 147 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 1.0E-5 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMC99_01874 74900a3015b0f00aa9bc9dd5a0b56a35 147 Gene3D G3DSA:2.40.330.20 1 135 7.1E-12 T 11-10-2018 IPR038619 MraZ superfamily AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 SUPERFAMILY SSF52096 4 315 1.49E-94 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 47.451 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 146 3.6E-57 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 8.0E-124 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 Gene3D G3DSA:3.90.226.10 1 315 3.4E-111 T 11-10-2018 AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 2.9E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 2.9E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 2.9E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 2.9E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 2.9E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_00935 b8c6707d1143d5bd69a2adc2dceb6f28 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 2.9E-39 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_02362 2ad4a60a0c913124fdc07bef5d9645a2 261 Gene3D G3DSA:3.40.50.300 2 238 1.8E-87 T 11-10-2018 AMC99_02362 2ad4a60a0c913124fdc07bef5d9645a2 261 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 4 229 8.5E-102 T 11-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 AMC99_02362 2ad4a60a0c913124fdc07bef5d9645a2 261 SUPERFAMILY SSF52540 35 222 3.72E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02362 2ad4a60a0c913124fdc07bef5d9645a2 261 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 5 228 4.0E-91 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related AMC99_02362 2ad4a60a0c913124fdc07bef5d9645a2 261 PIRSF PIRSF028756 2 251 5.2E-106 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 AMC99_02611 c6dfda69f086d5704d7b9783463cb9f4 336 SUPERFAMILY SSF52540 3 257 2.62E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02611 c6dfda69f086d5704d7b9783463cb9f4 336 Pfam PF00685 Sulfotransferase domain 10 257 2.3E-5 T 11-10-2018 IPR000863 Sulfotransferase domain GO:0008146 AMC99_02186 369e9ddb957cb1413f98ac4a6cadb883 254 SUPERFAMILY SSF81901 43 189 3.92E-13 T 11-10-2018 AMC99_02186 369e9ddb957cb1413f98ac4a6cadb883 254 Gene3D G3DSA:1.25.40.10 27 231 5.7E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00835 cca5f857441d2716a5c5c8e8186d127f 209 Pfam PF07811 TadE-like protein 17 59 2.1E-9 T 11-10-2018 IPR012495 TadE-like AMC99_00850 ff9c4b891274ce90465ce9d97054c106 271 Pfam PF04536 TPM domain 32 155 4.8E-39 T 11-10-2018 IPR007621 TPM domain AMC99_00850 ff9c4b891274ce90465ce9d97054c106 271 Gene3D G3DSA:3.10.310.50 17 166 2.1E-50 T 11-10-2018 AMC99_00282 4288e8253afd4495521ef25e80997239 318 Pfam PF00106 short chain dehydrogenase 22 227 1.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00282 4288e8253afd4495521ef25e80997239 318 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 5.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00282 4288e8253afd4495521ef25e80997239 318 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 221 5.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00282 4288e8253afd4495521ef25e80997239 318 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 5.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00282 4288e8253afd4495521ef25e80997239 318 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 5.5E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AMC99_00282 4288e8253afd4495521ef25e80997239 318 Gene3D G3DSA:3.40.50.720 13 318 1.1E-87 T 11-10-2018 AMC99_00282 4288e8253afd4495521ef25e80997239 318 SUPERFAMILY SSF51735 19 279 3.12E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_01925 48f7bc20d9a3d34fb85e06927b1b4c2f 569 Pfam PF00263 Bacterial type II and III secretion system protein 319 476 5.4E-41 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 AMC99_01925 48f7bc20d9a3d34fb85e06927b1b4c2f 569 PRINTS PR00811 Bacterial general secretion pathway protein D signature 441 459 5.3E-7 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01925 48f7bc20d9a3d34fb85e06927b1b4c2f 569 PRINTS PR00811 Bacterial general secretion pathway protein D signature 349 359 5.3E-7 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01925 48f7bc20d9a3d34fb85e06927b1b4c2f 569 PRINTS PR00811 Bacterial general secretion pathway protein D signature 464 478 5.3E-7 T 11-10-2018 IPR001775 GspD/PilQ family AMC99_01925 48f7bc20d9a3d34fb85e06927b1b4c2f 569 Pfam PF13629 Pilus formation protein N terminal region 62 131 1.7E-18 T 11-10-2018 IPR032789 Pilus formation protein, N-terminal AMC99_00263 a9fe6f88db3804db279c40a3ad49bc92 476 SUPERFAMILY SSF56601 24 344 7.31E-83 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_00263 a9fe6f88db3804db279c40a3ad49bc92 476 Gene3D G3DSA:3.40.710.10 21 336 9.4E-88 T 11-10-2018 AMC99_00263 a9fe6f88db3804db279c40a3ad49bc92 476 Pfam PF00144 Beta-lactamase 31 340 2.9E-72 T 11-10-2018 IPR001466 Beta-lactamase-related AMC99_01880 21e450251bf4dbcb2289a08f0c2118fe 688 Pfam PF00326 Prolyl oligopeptidase family 445 656 4.3E-44 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 AMC99_01880 21e450251bf4dbcb2289a08f0c2118fe 688 SUPERFAMILY SSF69304 62 293 1.96E-15 T 11-10-2018 AMC99_01880 21e450251bf4dbcb2289a08f0c2118fe 688 SUPERFAMILY SSF53474 392 655 3.33E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01880 21e450251bf4dbcb2289a08f0c2118fe 688 Gene3D G3DSA:3.40.50.1820 357 668 2.3E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01880 21e450251bf4dbcb2289a08f0c2118fe 688 Gene3D G3DSA:2.120.10.30 35 206 1.5E-13 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMC99_02284 4cb8d2bbf4a350111ba474c32b8f4063 81 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 7 63 1.5E-21 T 11-10-2018 IPR018684 Protein of unknown function DUF2171 AMC99_01338 41bfc67d6ae4c7b6bb001cb717be5a01 315 Pfam PF07859 alpha/beta hydrolase fold 85 288 6.1E-56 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMC99_01338 41bfc67d6ae4c7b6bb001cb717be5a01 315 SUPERFAMILY SSF53474 42 313 2.65E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01338 41bfc67d6ae4c7b6bb001cb717be5a01 315 Gene3D G3DSA:3.40.50.1820 1 312 2.0E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00785 3946338e07061458c01a829f8c050bc9 345 SMART SM00729 61 265 1.8E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AMC99_00785 3946338e07061458c01a829f8c050bc9 345 SUPERFAMILY SSF102114 57 270 2.16E-14 T 11-10-2018 AMC99_00785 3946338e07061458c01a829f8c050bc9 345 Pfam PF13353 4Fe-4S single cluster domain 64 155 7.9E-5 T 11-10-2018 AMC99_00785 3946338e07061458c01a829f8c050bc9 345 Pfam PF04055 Radical SAM superfamily 67 213 8.9E-8 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_00785 3946338e07061458c01a829f8c050bc9 345 Gene3D G3DSA:3.20.20.70 44 310 7.1E-10 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01257 019329c67024b9966edfaf0a8c175010 222 PIRSF PIRSF000216 9 220 4.1E-62 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01257 019329c67024b9966edfaf0a8c175010 222 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 30 181 2.8E-51 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01257 019329c67024b9966edfaf0a8c175010 222 Gene3D G3DSA:1.10.10.1590 20 100 6.3E-21 T 11-10-2018 AMC99_01257 019329c67024b9966edfaf0a8c175010 222 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 31 181 1.3E-54 T 11-10-2018 AMC99_01257 019329c67024b9966edfaf0a8c175010 222 SUPERFAMILY SSF52833 22 192 2.46E-52 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01257 019329c67024b9966edfaf0a8c175010 222 Gene3D G3DSA:3.40.30.10 101 201 1.7E-30 T 11-10-2018 AMC99_00316 e4041928f82551d3ac96c8a5c43443bc 365 Pfam PF00487 Fatty acid desaturase 76 335 3.5E-28 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 AMC99_02204 efe7e48ddf274e34fc95209e03b51223 584 Gene3D G3DSA:3.30.300.30 466 575 2.0E-29 T 11-10-2018 AMC99_02204 efe7e48ddf274e34fc95209e03b51223 584 Pfam PF00501 AMP-binding enzyme 54 471 2.1E-73 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_02204 efe7e48ddf274e34fc95209e03b51223 584 Gene3D G3DSA:3.40.50.12780 11 465 4.1E-130 T 11-10-2018 AMC99_02204 efe7e48ddf274e34fc95209e03b51223 584 Pfam PF14535 AMP-binding enzyme C-terminal domain 473 564 4.8E-6 T 11-10-2018 IPR028154 AMP-dependent ligase, C-terminal AMC99_02204 efe7e48ddf274e34fc95209e03b51223 584 SUPERFAMILY SSF56801 45 573 2.35E-103 T 11-10-2018 AMC99_01341 056637364382cfd687700888de8201da 393 Pfam PF01189 16S rRNA methyltransferase RsmB/F 202 389 1.1E-37 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AMC99_01341 056637364382cfd687700888de8201da 393 Gene3D G3DSA:3.40.50.150 106 390 4.1E-61 T 11-10-2018 AMC99_01341 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 326 342 2.5E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_01341 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 177 191 2.5E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_01341 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 206 216 2.5E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_01341 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 276 288 2.5E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_01341 056637364382cfd687700888de8201da 393 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 374 391 2.5E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_01341 056637364382cfd687700888de8201da 393 SUPERFAMILY SSF53335 124 389 2.17E-54 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02810 94f8a9b9b6ad0b8237b820affeb2045c 376 Pfam PF00144 Beta-lactamase 5 362 4.9E-60 T 11-10-2018 IPR001466 Beta-lactamase-related AMC99_02810 94f8a9b9b6ad0b8237b820affeb2045c 376 Gene3D G3DSA:3.40.710.10 3 376 2.9E-108 T 11-10-2018 AMC99_02810 94f8a9b9b6ad0b8237b820affeb2045c 376 SUPERFAMILY SSF56601 3 370 1.2E-85 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_02098 7bec904314aa1c46810a4fa4a52ecb8c 193 Gene3D G3DSA:1.10.357.10 1 193 5.1E-30 T 11-10-2018 AMC99_02098 7bec904314aa1c46810a4fa4a52ecb8c 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 43 3.4E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_02098 7bec904314aa1c46810a4fa4a52ecb8c 193 SUPERFAMILY SSF46689 2 64 5.64E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_02489 211b0e7570888b0570dadd4d8e4bf9ad 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 15 120 9.5E-29 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 AMC99_02489 211b0e7570888b0570dadd4d8e4bf9ad 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 16 116 6.0E-19 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 AMC99_02489 211b0e7570888b0570dadd4d8e4bf9ad 120 Gene3D G3DSA:2.60.300.12 14 120 4.1E-29 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMC99_02489 211b0e7570888b0570dadd4d8e4bf9ad 120 SUPERFAMILY SSF89360 15 109 3.53E-23 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AMC99_02489 211b0e7570888b0570dadd4d8e4bf9ad 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 101 118 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 AMC99_00333 f1e04f289246e8b1ea28fcd5d0676517 309 Pfam PF02219 Methylenetetrahydrofolate reductase 25 301 9.2E-94 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 AMC99_00333 f1e04f289246e8b1ea28fcd5d0676517 309 Gene3D G3DSA:3.20.20.220 7 308 9.8E-101 T 11-10-2018 AMC99_00333 f1e04f289246e8b1ea28fcd5d0676517 309 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 29 300 8.9E-101 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 AMC99_00333 f1e04f289246e8b1ea28fcd5d0676517 309 SUPERFAMILY SSF51730 25 304 7.26E-96 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AMC99_01415 7b0b4408fbc570635b8ea4eab65e0885 172 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01415 7b0b4408fbc570635b8ea4eab65e0885 172 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 24.064 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01415 7b0b4408fbc570635b8ea4eab65e0885 172 Pfam PF00886 Ribosomal protein S16 9 70 2.0E-26 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01415 7b0b4408fbc570635b8ea4eab65e0885 172 Gene3D G3DSA:3.30.1320.10 1 171 5.3E-37 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01415 7b0b4408fbc570635b8ea4eab65e0885 172 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 2.2E-31 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_01415 7b0b4408fbc570635b8ea4eab65e0885 172 SUPERFAMILY SSF54565 3 88 1.44E-31 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00889 2acaed20277b26face4b0ebbcd2955a2 318 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 303 2.6E-67 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme AMC99_00889 2acaed20277b26face4b0ebbcd2955a2 318 Gene3D G3DSA:3.40.50.1100 52 148 1.3E-87 T 11-10-2018 AMC99_00889 2acaed20277b26face4b0ebbcd2955a2 318 Gene3D G3DSA:3.40.50.1100 22 307 1.3E-87 T 11-10-2018 AMC99_00889 2acaed20277b26face4b0ebbcd2955a2 318 SUPERFAMILY SSF53686 12 308 1.96E-75 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMC99_00885 54598b9df298cbe91761b8e2a0dbcd6a 259 Pfam PF13350 Tyrosine phosphatase family 8 258 6.1E-58 T 11-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type AMC99_00885 54598b9df298cbe91761b8e2a0dbcd6a 259 Gene3D G3DSA:3.90.190.10 9 258 1.1E-57 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMC99_00885 54598b9df298cbe91761b8e2a0dbcd6a 259 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 146 156 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 AMC99_00885 54598b9df298cbe91761b8e2a0dbcd6a 259 SUPERFAMILY SSF52799 7 257 1.13E-52 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMC99_01738 6710af9156f81ffae13d0d270f169a65 518 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 499 1.6E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_01738 6710af9156f81ffae13d0d270f169a65 518 SUPERFAMILY SSF56801 6 513 5.63E-144 T 11-10-2018 AMC99_01738 6710af9156f81ffae13d0d270f169a65 518 Gene3D G3DSA:3.40.50.12780 1 411 2.9E-107 T 11-10-2018 AMC99_01738 6710af9156f81ffae13d0d270f169a65 518 Pfam PF00501 AMP-binding enzyme 15 415 1.0E-91 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_01738 6710af9156f81ffae13d0d270f169a65 518 Gene3D G3DSA:3.30.300.310 412 513 5.8E-34 T 11-10-2018 AMC99_00627 e22f9a2ab1a67548dc43abad495ddcad 227 SMART SM00702 43 222 1.8E-31 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 AMC99_00627 e22f9a2ab1a67548dc43abad495ddcad 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 119 222 4.9E-16 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 AMC99_00627 e22f9a2ab1a67548dc43abad495ddcad 227 Gene3D G3DSA:2.60.120.620 28 223 7.9E-50 T 11-10-2018 AMC99_02139 d92306869695e67264de005d5d41740f 146 PIRSF PIRSF006173 1 146 9.9E-58 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 AMC99_02139 d92306869695e67264de005d5d41740f 146 Pfam PF03692 Putative zinc- or iron-chelating domain 25 93 3.9E-7 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein AMC99_02293 fddab39cf6e4e157d4bae4fc95f1567f 245 SUPERFAMILY SSF53335 13 186 1.32E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02293 fddab39cf6e4e157d4bae4fc95f1567f 245 Pfam PF08241 Methyltransferase domain 40 120 2.5E-10 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMC99_02293 fddab39cf6e4e157d4bae4fc95f1567f 245 Gene3D G3DSA:3.40.50.150 2 245 5.2E-45 T 11-10-2018 AMC99_02498 761475e2dc1450608c49e1935c80a102 504 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 26 495 1.1E-191 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AMC99_02498 761475e2dc1450608c49e1935c80a102 504 Pfam PF01458 Uncharacterized protein family (UPF0051) 242 475 4.8E-68 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMC99_02498 761475e2dc1450608c49e1935c80a102 504 SUPERFAMILY SSF101960 47 501 2.75E-137 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily AMC99_02510 68abadfcf06d6ee4120c1447c4116805 351 Pfam PF02628 Cytochrome oxidase assembly protein 20 335 3.1E-100 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AMC99_02510 68abadfcf06d6ee4120c1447c4116805 351 Hamap MF_01665 Heme A synthase [ctaA]. 15 346 24.195 T 11-10-2018 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AMC99_02097 fd2dc8184a4acf0e1e67662ae739e009 345 Pfam PF01636 Phosphotransferase enzyme family 30 258 8.2E-40 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMC99_02097 fd2dc8184a4acf0e1e67662ae739e009 345 SUPERFAMILY SSF56112 5 337 7.58E-51 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMC99_02097 fd2dc8184a4acf0e1e67662ae739e009 345 Gene3D G3DSA:3.30.200.20 4 105 1.8E-19 T 11-10-2018 AMC99_02097 fd2dc8184a4acf0e1e67662ae739e009 345 Gene3D G3DSA:3.90.1200.10 114 344 1.8E-58 T 11-10-2018 AMC99_02685 77dda29c3340ec15ea2d1ca350c38fae 139 Gene3D G3DSA:3.10.129.10 1 130 9.3E-32 T 11-10-2018 AMC99_02685 77dda29c3340ec15ea2d1ca350c38fae 139 Pfam PF03061 Thioesterase superfamily 20 97 3.9E-10 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_02685 77dda29c3340ec15ea2d1ca350c38fae 139 SUPERFAMILY SSF54637 1 129 2.33E-33 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00865 2a023cfd9bacb36cbd1489201addb386 55 PIRSF PIRSF037205 2 53 1.6E-26 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 AMC99_00865 2a023cfd9bacb36cbd1489201addb386 55 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 6 45 1.0E-23 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 AMC99_02787 1e49212c7f80bddea191bd93265b7762 425 SMART SM00911 238 320 5.4E-16 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_02787 1e49212c7f80bddea191bd93265b7762 425 Pfam PF05227 CHASE3 domain 41 177 5.9E-27 T 11-10-2018 IPR007891 CHASE3 AMC99_02787 1e49212c7f80bddea191bd93265b7762 425 Gene3D G3DSA:1.20.1440.210 47 176 1.2E-23 T 11-10-2018 AMC99_02787 1e49212c7f80bddea191bd93265b7762 425 Pfam PF07536 HWE histidine kinase 238 318 1.7E-15 T 11-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 AMC99_02787 1e49212c7f80bddea191bd93265b7762 425 SUPERFAMILY SSF55874 319 418 7.19E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02787 1e49212c7f80bddea191bd93265b7762 425 Gene3D G3DSA:3.30.565.10 294 423 2.6E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00105 1a3a9587c821ee20e8e5ea5f7b35242f 188 SUPERFAMILY SSF81901 53 181 1.31E-10 T 11-10-2018 AMC99_00105 1a3a9587c821ee20e8e5ea5f7b35242f 188 Gene3D G3DSA:1.25.40.10 18 186 6.3E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00185 4da3b97d5902e3146f81bfdbfedff5a6 161 Gene3D G3DSA:3.40.50.2000 1 156 5.6E-17 T 11-10-2018 AMC99_00185 4da3b97d5902e3146f81bfdbfedff5a6 161 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 1 111 9.9E-9 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AMC99_00185 4da3b97d5902e3146f81bfdbfedff5a6 161 SUPERFAMILY SSF53756 1 99 5.93E-9 T 11-10-2018 AMC99_00773 fbfd75f9288aaa14d8cff1b0745b8082 145 Gene3D G3DSA:2.40.50.100 7 130 5.8E-26 T 11-10-2018 AMC99_00773 fbfd75f9288aaa14d8cff1b0745b8082 145 Pfam PF01597 Glycine cleavage H-protein 15 126 5.2E-28 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate AMC99_00773 fbfd75f9288aaa14d8cff1b0745b8082 145 SUPERFAMILY SSF51230 14 123 3.53E-20 T 11-10-2018 IPR011053 Single hybrid motif AMC99_00329 c9719a94e2f2e5fac5476cba1807442e 258 SUPERFAMILY SSF54637 109 255 2.04E-16 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00329 c9719a94e2f2e5fac5476cba1807442e 258 SUPERFAMILY SSF54637 21 108 3.53E-12 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00329 c9719a94e2f2e5fac5476cba1807442e 258 Pfam PF13622 Thioesterase-like superfamily 23 255 2.1E-37 T 11-10-2018 AMC99_00329 c9719a94e2f2e5fac5476cba1807442e 258 Gene3D G3DSA:3.10.129.90 5 257 4.7E-54 T 11-10-2018 AMC99_01762 bf6a3079146d40a2e258fc686474ae3d 397 SUPERFAMILY SSF81891 154 385 1.31E-41 T 11-10-2018 AMC99_01762 bf6a3079146d40a2e258fc686474ae3d 397 Pfam PF01743 Poly A polymerase head domain 34 156 8.5E-31 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMC99_01762 bf6a3079146d40a2e258fc686474ae3d 397 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 186 241 4.2E-9 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AMC99_01762 bf6a3079146d40a2e258fc686474ae3d 397 Gene3D G3DSA:3.30.460.10 10 153 1.0E-40 T 11-10-2018 AMC99_01762 bf6a3079146d40a2e258fc686474ae3d 397 Gene3D G3DSA:1.10.3090.10 154 322 1.0E-34 T 11-10-2018 AMC99_01762 bf6a3079146d40a2e258fc686474ae3d 397 SUPERFAMILY SSF81301 24 153 1.85E-37 T 11-10-2018 AMC99_02354 087ebd29b9abd92d5856e1b99eafef87 305 SMART SM00244 72 237 2.3E-9 T 11-10-2018 IPR001107 Band 7 domain AMC99_02354 087ebd29b9abd92d5856e1b99eafef87 305 SUPERFAMILY SSF117892 115 240 8.76E-10 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AMC99_02354 087ebd29b9abd92d5856e1b99eafef87 305 Gene3D G3DSA:3.30.479.30 108 239 1.5E-7 T 11-10-2018 AMC99_02354 087ebd29b9abd92d5856e1b99eafef87 305 Pfam PF01145 SPFH domain / Band 7 family 76 248 4.1E-22 T 11-10-2018 IPR001107 Band 7 domain AMC99_01406 54dac8ec36ff80ed1b178cb069fff0e2 533 SUPERFAMILY SSF103473 31 524 7.85E-69 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_01406 54dac8ec36ff80ed1b178cb069fff0e2 533 Pfam PF07690 Major Facilitator Superfamily 42 433 2.8E-55 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_01406 54dac8ec36ff80ed1b178cb069fff0e2 533 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 37 505 1.1E-119 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 AMC99_01406 54dac8ec36ff80ed1b178cb069fff0e2 533 Gene3D G3DSA:1.20.1250.20 288 518 2.5E-14 T 11-10-2018 AMC99_01406 54dac8ec36ff80ed1b178cb069fff0e2 533 Gene3D G3DSA:1.20.1720.10 36 284 5.6E-53 T 11-10-2018 AMC99_01691 457a572c333bbf43ce47cbd613763fc6 99 Pfam PF06667 Phage shock protein B 6 68 7.1E-19 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMC99_01691 457a572c333bbf43ce47cbd613763fc6 99 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 6 70 4.0E-26 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 AMC99_02791 f2ca9df2fe24421b3bebdb236530eee5 135 Pfam PF10116 Protein required for attachment to host cells 9 131 1.8E-19 T 11-10-2018 IPR019291 Host attachment protein AMC99_00053 ded37cf0fe710ff76785dbf641a393e3 211 SUPERFAMILY SSF51306 76 209 3.4E-21 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AMC99_00053 ded37cf0fe710ff76785dbf641a393e3 211 ProSitePatterns PS00501 Signal peptidases I serine active site. 127 134 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 AMC99_00053 ded37cf0fe710ff76785dbf641a393e3 211 Gene3D G3DSA:2.10.109.10 85 210 3.1E-9 T 11-10-2018 AMC99_00053 ded37cf0fe710ff76785dbf641a393e3 211 Pfam PF00717 Peptidase S24-like 124 189 4.7E-10 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AMC99_01331 052b23bd4e28b0ca3dbb8660e604211e 394 Gene3D G3DSA:1.20.58.710 154 254 3.0E-83 T 11-10-2018 AMC99_01331 052b23bd4e28b0ca3dbb8660e604211e 394 Pfam PF00144 Beta-lactamase 96 374 5.6E-41 T 11-10-2018 IPR001466 Beta-lactamase-related AMC99_01331 052b23bd4e28b0ca3dbb8660e604211e 394 SUPERFAMILY SSF56601 6 389 3.68E-87 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_01331 052b23bd4e28b0ca3dbb8660e604211e 394 Gene3D G3DSA:3.40.710.10 102 372 3.0E-83 T 11-10-2018 AMC99_02466 802c47ab7872937c5289fa3d3b20aa75 364 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 207 303 2.3E-29 T 11-10-2018 IPR019236 Domain of unknown function DUF2183 AMC99_00562 16a8c008a4360d03a40f3c7eb38fd936 251 SUPERFAMILY SSF63892 5 246 3.79E-90 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMC99_00562 16a8c008a4360d03a40f3c7eb38fd936 251 Gene3D G3DSA:3.20.20.70 1 248 1.3E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00562 16a8c008a4360d03a40f3c7eb38fd936 251 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 243 4.8E-88 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMC99_00562 16a8c008a4360d03a40f3c7eb38fd936 251 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 247 117.968 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMC99_00562 16a8c008a4360d03a40f3c7eb38fd936 251 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 242 7.0E-95 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AMC99_01118 3fbd6c646f45c4a42e09b14d9de38a02 177 Gene3D G3DSA:3.40.50.2020 22 171 5.3E-18 T 11-10-2018 AMC99_01118 3fbd6c646f45c4a42e09b14d9de38a02 177 Pfam PF00156 Phosphoribosyl transferase domain 58 155 3.0E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMC99_01118 3fbd6c646f45c4a42e09b14d9de38a02 177 SUPERFAMILY SSF53271 15 156 1.09E-23 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMC99_02042 2e7d5e768fcf1e6b665b4a03a9b66525 276 SUPERFAMILY SSF47413 18 82 6.88E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_02042 2e7d5e768fcf1e6b665b4a03a9b66525 276 Pfam PF13413 Helix-turn-helix domain 21 81 2.4E-24 T 11-10-2018 AMC99_02042 2e7d5e768fcf1e6b665b4a03a9b66525 276 Gene3D G3DSA:1.10.260.40 10 102 1.0E-26 T 11-10-2018 AMC99_02042 2e7d5e768fcf1e6b665b4a03a9b66525 276 Pfam PF13464 Domain of unknown function (DUF4115) 189 244 3.2E-9 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 AMC99_00965 f5e9fe879c1208a28136b5c24ac95146 92 Gene3D G3DSA:1.10.150.250 7 89 1.8E-17 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AMC99_00965 f5e9fe879c1208a28136b5c24ac95146 92 SUPERFAMILY SSF109910 8 84 4.18E-21 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AMC99_00965 f5e9fe879c1208a28136b5c24ac95146 92 Pfam PF03937 Flavinator of succinate dehydrogenase 12 76 4.9E-21 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase AMC99_02088 cbabe937e7c7c0c89d64ff1d9ff355ff 50 SUPERFAMILY SSF89796 2 43 4.01E-5 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_01586 e8881aa0d02a3e19a8f39f43d445bcb5 83 Pfam PF04380 Membrane fusogenic activity 2 78 5.4E-22 T 11-10-2018 IPR007475 Membrane fusogenic activity AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 SMART SM00388 277 335 2.1E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 SUPERFAMILY SSF55874 324 480 4.32E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 SMART SM00304 223 276 0.0075 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 Gene3D G3DSA:1.10.287.130 221 331 3.0E-14 T 11-10-2018 AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 2.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 2.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 2.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 2.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 SMART SM00387 374 483 8.9E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 SUPERFAMILY SSF47384 260 333 8.44E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 481 2.0E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AMC99_02341 64cc61a8741a3ab3ec125def269c9342 483 Gene3D G3DSA:3.30.565.10 336 481 4.3E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_02003 33bea36d71e986f7ed56c236b12ec6f3 712 SUPERFAMILY SSF56935 57 706 6.41E-31 T 11-10-2018 AMC99_02003 33bea36d71e986f7ed56c236b12ec6f3 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 138 2.2E-5 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_02003 33bea36d71e986f7ed56c236b12ec6f3 712 Gene3D G3DSA:2.170.130.10 43 154 2.3E-7 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02563 e221d2ff6bb5367b51515bd7e3a877c3 319 PIRSF PIRSF004930 5 319 1.6E-88 T 11-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 AMC99_02563 e221d2ff6bb5367b51515bd7e3a877c3 319 SUPERFAMILY SSF55821 10 204 1.62E-58 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMC99_02563 e221d2ff6bb5367b51515bd7e3a877c3 319 Pfam PF01300 Telomere recombination 22 200 1.5E-53 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AMC99_02563 e221d2ff6bb5367b51515bd7e3a877c3 319 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 13 203 2.4E-48 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AMC99_02563 e221d2ff6bb5367b51515bd7e3a877c3 319 Pfam PF03481 Putative GTP-binding controlling metal-binding 224 319 1.6E-14 T 11-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain AMC99_02563 e221d2ff6bb5367b51515bd7e3a877c3 319 Gene3D G3DSA:3.40.50.11030 260 319 3.1E-7 T 11-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily AMC99_02563 e221d2ff6bb5367b51515bd7e3a877c3 319 Gene3D G3DSA:3.90.870.10 7 214 1.9E-69 T 11-10-2018 AMC99_01261 147226126c17613a4d963797eeac9969 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 1.1E-35 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01261 147226126c17613a4d963797eeac9969 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 3 124 18.289 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AMC99_01261 147226126c17613a4d963797eeac9969 124 Gene3D G3DSA:1.20.58.1610 2 124 1.5E-40 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01483 f81b6915688ce19878e130b9b3520f63 237 SUPERFAMILY SSF56524 36 236 6.41E-51 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMC99_01483 f81b6915688ce19878e130b9b3520f63 237 Pfam PF00174 Oxidoreductase molybdopterin binding domain 78 211 2.1E-37 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 AMC99_01483 f81b6915688ce19878e130b9b3520f63 237 Gene3D G3DSA:3.90.420.10 41 237 4.1E-51 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 AMC99_02206 d6181ce29990dcc6682636b0f3413206 406 Pfam PF05816 Toxic anion resistance protein (TelA) 67 383 1.2E-97 T 11-10-2018 IPR008863 Toxic anion resistance AMC99_00328 28630c5db3b9e7cc46e20ebf4e8c9f3a 268 SUPERFAMILY SSF52096 15 267 6.4E-68 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_00328 28630c5db3b9e7cc46e20ebf4e8c9f3a 268 Gene3D G3DSA:3.90.226.10 2 210 9.6E-72 T 11-10-2018 AMC99_00328 28630c5db3b9e7cc46e20ebf4e8c9f3a 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 267 3.5E-40 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_00328 28630c5db3b9e7cc46e20ebf4e8c9f3a 268 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMC99_00328 28630c5db3b9e7cc46e20ebf4e8c9f3a 268 Gene3D G3DSA:1.10.12.10 211 267 1.9E-19 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMC99_01282 154e7ed6cf93a68d3541a191c85b46c3 232 Pfam PF00483 Nucleotidyl transferase 2 107 9.1E-6 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMC99_01282 154e7ed6cf93a68d3541a191c85b46c3 232 SUPERFAMILY SSF53448 2 225 1.17E-27 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01282 154e7ed6cf93a68d3541a191c85b46c3 232 Gene3D G3DSA:3.90.550.10 1 227 2.3E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00003 e37ad4988658f868404bb99a90e7ea08 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 112 7.1E-28 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR AMC99_00003 e37ad4988658f868404bb99a90e7ea08 116 SUPERFAMILY SSF52833 1 114 6.92E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00003 e37ad4988658f868404bb99a90e7ea08 116 Pfam PF03960 ArsC family 9 112 1.7E-15 T 11-10-2018 IPR006660 Arsenate reductase-like AMC99_00003 e37ad4988658f868404bb99a90e7ea08 116 Gene3D G3DSA:3.40.30.10 1 116 2.8E-42 T 11-10-2018 AMC99_02253 019892146b91aeddc1831a759b4cab25 310 Pfam PF02687 FtsX-like permease family 220 307 1.4E-5 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_01183 c5c367c29fadb83be8c06300ad1e85c3 255 Gene3D G3DSA:3.60.15.10 1 255 1.5E-67 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_01183 c5c367c29fadb83be8c06300ad1e85c3 255 Pfam PF12706 Beta-lactamase superfamily domain 46 226 1.2E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_01183 c5c367c29fadb83be8c06300ad1e85c3 255 SMART SM00849 34 226 0.0089 T 11-10-2018 IPR001279 Metallo-beta-lactamase AMC99_01183 c5c367c29fadb83be8c06300ad1e85c3 255 SUPERFAMILY SSF56281 2 253 9.04E-48 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_01605 aa74198639f4c0f3ef35174c630e476a 204 Gene3D G3DSA:3.30.420.40 90 171 5.2E-31 T 11-10-2018 AMC99_01605 aa74198639f4c0f3ef35174c630e476a 204 SUPERFAMILY SSF53067 1 97 4.08E-21 T 11-10-2018 AMC99_01605 aa74198639f4c0f3ef35174c630e476a 204 Gene3D G3DSA:3.30.420.40 4 184 5.2E-31 T 11-10-2018 AMC99_01605 aa74198639f4c0f3ef35174c630e476a 204 Pfam PF00814 Glycoprotease family 32 140 9.2E-15 T 11-10-2018 IPR000905 Gcp-like domain AMC99_01605 aa74198639f4c0f3ef35174c630e476a 204 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 195 1.1E-38 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AMC99_01135 db9583ebd26a616fd8322a14fa3839ed 291 SUPERFAMILY SSF58104 48 286 2.75E-25 T 11-10-2018 AMC99_01135 db9583ebd26a616fd8322a14fa3839ed 291 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 105 245 1.0E-13 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_01135 db9583ebd26a616fd8322a14fa3839ed 291 Gene3D G3DSA:1.10.287.950 8 289 8.4E-22 T 11-10-2018 AMC99_01135 db9583ebd26a616fd8322a14fa3839ed 291 SMART SM00283 12 287 0.0015 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 AMC99_02424 5427c53a60af55f460604c62c3383161 429 Pfam PF12698 ABC-2 family transporter protein 189 388 5.8E-16 T 11-10-2018 AMC99_01333 3e8841475640605216282bb703b30cf7 460 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 338 357 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMC99_01333 3e8841475640605216282bb703b30cf7 460 Gene3D G3DSA:1.25.40.80 124 276 3.2E-83 T 11-10-2018 AMC99_01333 3e8841475640605216282bb703b30cf7 460 SUPERFAMILY SSF52425 4 202 2.22E-52 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 AMC99_01333 3e8841475640605216282bb703b30cf7 460 PRINTS PR00147 DNA photolyase signature 318 334 5.0E-24 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMC99_01333 3e8841475640605216282bb703b30cf7 460 PRINTS PR00147 DNA photolyase signature 377 391 5.0E-24 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMC99_01333 3e8841475640605216282bb703b30cf7 460 PRINTS PR00147 DNA photolyase signature 135 151 5.0E-24 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMC99_01333 3e8841475640605216282bb703b30cf7 460 PRINTS PR00147 DNA photolyase signature 338 356 5.0E-24 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 AMC99_01333 3e8841475640605216282bb703b30cf7 460 Pfam PF00875 DNA photolyase 6 163 5.1E-45 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 AMC99_01333 3e8841475640605216282bb703b30cf7 460 Pfam PF03441 FAD binding domain of DNA photolyase 263 456 4.2E-70 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 AMC99_01333 3e8841475640605216282bb703b30cf7 460 Gene3D G3DSA:1.10.579.10 285 460 1.9E-63 T 11-10-2018 AMC99_01333 3e8841475640605216282bb703b30cf7 460 SUPERFAMILY SSF48173 187 458 3.27E-91 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 AMC99_01333 3e8841475640605216282bb703b30cf7 460 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 318 330 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMC99_01333 3e8841475640605216282bb703b30cf7 460 Gene3D G3DSA:3.40.50.620 6 200 3.2E-83 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_01608 6707d7d3a755fd0d5e4a6f5878685c53 141 SUPERFAMILY SSF46785 6 134 4.95E-38 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01608 6707d7d3a755fd0d5e4a6f5878685c53 141 Gene3D G3DSA:3.30.1490.190 87 138 7.5E-19 T 11-10-2018 AMC99_01608 6707d7d3a755fd0d5e4a6f5878685c53 141 Pfam PF01475 Ferric uptake regulator family 14 132 2.8E-40 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMC99_01608 6707d7d3a755fd0d5e4a6f5878685c53 141 Gene3D G3DSA:1.10.10.10 2 86 1.4E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01982 3d085140f9f5f32cc9cb6df0a3f41ed2 251 Gene3D G3DSA:3.30.70.2970 69 175 1.5E-16 T 11-10-2018 AMC99_01982 3d085140f9f5f32cc9cb6df0a3f41ed2 251 Gene3D G3DSA:3.30.110.170 59 216 1.5E-16 T 11-10-2018 AMC99_01982 3d085140f9f5f32cc9cb6df0a3f41ed2 251 Pfam PF04402 Protein of unknown function (DUF541) 57 215 7.6E-22 T 11-10-2018 IPR007497 Protein of unknown function DUF541 AMC99_01982 3d085140f9f5f32cc9cb6df0a3f41ed2 251 PIRSF PIRSF029033 16 251 5.6E-48 T 11-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AMC99_00262 4c503a234ceed792dfaa91e8018d40fa 188 Pfam PF00578 AhpC/TSA family 6 133 2.6E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_00262 4c503a234ceed792dfaa91e8018d40fa 188 SUPERFAMILY SSF52833 3 187 3.45E-52 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00262 4c503a234ceed792dfaa91e8018d40fa 188 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 188 4.7E-98 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMC99_00262 4c503a234ceed792dfaa91e8018d40fa 188 PIRSF PIRSF000239 1 188 1.6E-53 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AMC99_00262 4c503a234ceed792dfaa91e8018d40fa 188 Gene3D G3DSA:3.40.30.10 1 187 1.3E-57 T 11-10-2018 AMC99_00228 c107f256d620ee960d81a38faab710c1 411 Pfam PF00375 Sodium:dicarboxylate symporter family 9 395 5.6E-124 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMC99_00228 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 323 342 3.8E-31 T 11-10-2018 AMC99_00228 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 3.8E-31 T 11-10-2018 AMC99_00228 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 3.8E-31 T 11-10-2018 AMC99_00228 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 288 314 3.8E-31 T 11-10-2018 AMC99_00228 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 186 205 3.8E-31 T 11-10-2018 AMC99_00228 c107f256d620ee960d81a38faab710c1 411 PRINTS PR00173 Glutamate-aspartate symporter signature 350 370 3.8E-31 T 11-10-2018 AMC99_00228 c107f256d620ee960d81a38faab710c1 411 SUPERFAMILY SSF118215 9 395 3.92E-111 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMC99_00228 c107f256d620ee960d81a38faab710c1 411 Gene3D G3DSA:1.10.3860.10 1 410 5.0E-125 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMC99_00590 8d08a4784312c43c05864c0c62392f9e 300 Pfam PF00892 EamA-like transporter family 11 147 2.2E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_00590 8d08a4784312c43c05864c0c62392f9e 300 TIGRFAM TIGR00688 rarD: protein RarD 12 263 1.2E-56 T 11-10-2018 IPR004626 RarD protein GO:0005887 AMC99_00590 8d08a4784312c43c05864c0c62392f9e 300 SUPERFAMILY SSF103481 211 288 3.4E-6 T 11-10-2018 AMC99_00590 8d08a4784312c43c05864c0c62392f9e 300 SUPERFAMILY SSF103481 44 148 7.45E-12 T 11-10-2018 AMC99_00388 8f3133f40fb5d710bf90915ad51115f0 518 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 253 4.7E-8 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMC99_00388 8f3133f40fb5d710bf90915ad51115f0 518 SUPERFAMILY SSF51905 12 401 2.29E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00388 8f3133f40fb5d710bf90915ad51115f0 518 Gene3D G3DSA:3.50.50.60 325 448 2.1E-8 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_00388 8f3133f40fb5d710bf90915ad51115f0 518 Gene3D G3DSA:3.50.50.60 5 281 8.5E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01976 0bab4bc475ec3a5f6ba51ae8b23fb66c 254 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 25 253 1.1E-74 T 11-10-2018 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane AMC99_01622 08709aa2304d09e5e0d60897cc91f4b2 234 SUPERFAMILY SSF52833 9 231 2.5E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01622 08709aa2304d09e5e0d60897cc91f4b2 234 Pfam PF01323 DSBA-like thioredoxin domain 12 225 2.5E-41 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMC99_01622 08709aa2304d09e5e0d60897cc91f4b2 234 Gene3D G3DSA:3.40.30.10 2 229 5.5E-64 T 11-10-2018 AMC99_01721 4b445c764f5a89839cf57745088c650e 293 Gene3D G3DSA:3.40.50.10330 1 115 3.8E-17 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AMC99_01721 4b445c764f5a89839cf57745088c650e 293 Gene3D G3DSA:2.60.200.40 126 283 2.7E-18 T 11-10-2018 AMC99_01721 4b445c764f5a89839cf57745088c650e 293 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 110 2.3E-11 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMC99_01721 4b445c764f5a89839cf57745088c650e 293 SUPERFAMILY SSF111331 1 290 1.16E-36 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMC99_02481 abca22fd89275796bea5af072dac033b 67 Pfam PF09866 Uncharacterized protein conserved in bacteria (DUF2093) 21 62 9.8E-23 T 11-10-2018 IPR018661 Protein of unknown function DUF2093 AMC99_01011 7ac781a54a24856bfb692f66785f0ce8 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 16 37 1.5E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_01011 7ac781a54a24856bfb692f66785f0ce8 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 456 474 1.5E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_01011 7ac781a54a24856bfb692f66785f0ce8 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 332 352 1.5E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_01011 7ac781a54a24856bfb692f66785f0ce8 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 45 64 1.5E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_01011 7ac781a54a24856bfb692f66785f0ce8 474 SUPERFAMILY SSF161070 9 469 7.32E-121 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 AMC99_01011 7ac781a54a24856bfb692f66785f0ce8 474 Pfam PF00209 Sodium:neurotransmitter symporter family 171 377 1.9E-22 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_01011 7ac781a54a24856bfb692f66785f0ce8 474 Pfam PF00209 Sodium:neurotransmitter symporter family 11 125 2.3E-24 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMC99_01422 001f1f8e7f33945d90028bcaefe340f4 207 PIRSF PIRSF020606 6 205 6.5E-67 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 AMC99_01422 001f1f8e7f33945d90028bcaefe340f4 207 Pfam PF09997 Predicted membrane protein (DUF2238) 43 182 1.4E-51 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 AMC99_01796 5098acb5a520b183630317342bc639b0 149 ProSitePatterns PS00194 Thioredoxin family active site. 38 56 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AMC99_01796 5098acb5a520b183630317342bc639b0 149 Gene3D G3DSA:3.40.30.10 3 149 1.2E-34 T 11-10-2018 AMC99_01796 5098acb5a520b183630317342bc639b0 149 Pfam PF08534 Redoxin 10 73 4.5E-12 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 AMC99_01796 5098acb5a520b183630317342bc639b0 149 SUPERFAMILY SSF52833 10 136 2.53E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_02663 61b2f99febe48c4c92daf2ccae850e33 232 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 229 6.1E-58 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AMC99_02663 61b2f99febe48c4c92daf2ccae850e33 232 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 229 1.1E-46 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase AMC99_02663 61b2f99febe48c4c92daf2ccae850e33 232 Gene3D G3DSA:3.60.140.10 12 232 1.1E-62 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AMC99_02663 61b2f99febe48c4c92daf2ccae850e33 232 SUPERFAMILY SSF64438 20 231 7.33E-63 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMC99_00383 aa213377ef5f454487833ceb9f422b6e 102 Pfam PF13601 Winged helix DNA-binding domain 14 92 6.1E-24 T 11-10-2018 IPR027395 Winged helix DNA-binding domain AMC99_00383 aa213377ef5f454487833ceb9f422b6e 102 SUPERFAMILY SSF46785 4 93 7.8E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00383 aa213377ef5f454487833ceb9f422b6e 102 Gene3D G3DSA:1.10.10.10 1 96 3.9E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01558 4ad52f632d73f6890f4780bb1e55d5db 474 Pfam PF02321 Outer membrane efflux protein 252 435 1.5E-23 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_01558 4ad52f632d73f6890f4780bb1e55d5db 474 Pfam PF02321 Outer membrane efflux protein 40 231 5.1E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AMC99_01558 4ad52f632d73f6890f4780bb1e55d5db 474 SUPERFAMILY SSF56954 1 438 8.76E-70 T 11-10-2018 AMC99_01558 4ad52f632d73f6890f4780bb1e55d5db 474 Gene3D G3DSA:1.20.1600.10 39 444 1.7E-65 T 11-10-2018 AMC99_00199 2814ff129a1d3eb626c3566bea90ba43 242 Pfam PF13614 AAA domain 2 168 7.9E-29 T 11-10-2018 IPR025669 AAA domain AMC99_00199 2814ff129a1d3eb626c3566bea90ba43 242 SUPERFAMILY SSF52540 2 238 4.07E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00199 2814ff129a1d3eb626c3566bea90ba43 242 Gene3D G3DSA:3.40.50.300 1 242 1.7E-49 T 11-10-2018 AMC99_00013 c72b4e3036738705a92e6da6013e8c78 339 Pfam PF03060 Nitronate monooxygenase 91 330 1.2E-27 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMC99_00013 c72b4e3036738705a92e6da6013e8c78 339 Gene3D G3DSA:3.20.20.70 12 339 5.9E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00013 c72b4e3036738705a92e6da6013e8c78 339 SUPERFAMILY SSF51412 14 337 2.29E-52 T 11-10-2018 AMC99_00595 4f317fe7e9fe462f3243e69c7339f3bd 252 Pfam PF12697 Alpha/beta hydrolase family 1 243 2.3E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_00595 4f317fe7e9fe462f3243e69c7339f3bd 252 Gene3D G3DSA:3.40.50.1820 1 251 2.9E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00595 4f317fe7e9fe462f3243e69c7339f3bd 252 SUPERFAMILY SSF53474 1 243 5.54E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00414 9580f0d357876262f5d9c71cda3f53a3 425 Gene3D G3DSA:3.20.20.140 27 424 6.1E-151 T 11-10-2018 AMC99_00414 9580f0d357876262f5d9c71cda3f53a3 425 ProSitePatterns PS00869 Renal dipeptidase active site. 157 179 - T 11-10-2018 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AMC99_00414 9580f0d357876262f5d9c71cda3f53a3 425 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 37 403 3.0E-112 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 AMC99_00414 9580f0d357876262f5d9c71cda3f53a3 425 SUPERFAMILY SSF51556 30 411 2.24E-101 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_02483 f089dd16c2f147a9c0ce1c204c3ae38b 501 Pfam PF13742 OB-fold nucleic acid binding domain 26 119 8.2E-26 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AMC99_02483 f089dd16c2f147a9c0ce1c204c3ae38b 501 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 23 461 28.096 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMC99_02483 f089dd16c2f147a9c0ce1c204c3ae38b 501 Pfam PF02601 Exonuclease VII, large subunit 142 457 1.1E-92 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AMC99_02483 f089dd16c2f147a9c0ce1c204c3ae38b 501 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 27 458 7.2E-129 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AMC99_00841 71d36f663946fd2b01a1aa2008354741 231 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMC99_00841 71d36f663946fd2b01a1aa2008354741 231 SUPERFAMILY SSF52540 8 227 3.99E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00841 71d36f663946fd2b01a1aa2008354741 231 SMART SM00382 36 230 3.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_00841 71d36f663946fd2b01a1aa2008354741 231 Gene3D G3DSA:3.40.50.300 6 231 1.1E-66 T 11-10-2018 AMC99_00841 71d36f663946fd2b01a1aa2008354741 231 Pfam PF00005 ABC transporter 27 174 4.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMC99_00963 6cc7ba38eafd193a516a41564f2aea17 262 SUPERFAMILY SSF141868 18 259 6.41E-74 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_00963 6cc7ba38eafd193a516a41564f2aea17 262 SMART SM00052 13 255 5.1E-76 T 11-10-2018 IPR001633 EAL domain AMC99_00963 6cc7ba38eafd193a516a41564f2aea17 262 Pfam PF00563 EAL domain 20 250 5.3E-65 T 11-10-2018 IPR001633 EAL domain AMC99_00963 6cc7ba38eafd193a516a41564f2aea17 262 Gene3D G3DSA:3.20.20.450 13 262 5.2E-78 T 11-10-2018 IPR035919 EAL domain superfamily AMC99_00596 8ff7d9b403afb6a294685cf396c362d4 378 Gene3D G3DSA:3.40.50.2000 178 356 2.9E-49 T 11-10-2018 AMC99_00596 8ff7d9b403afb6a294685cf396c362d4 378 Pfam PF00534 Glycosyl transferases group 1 195 350 3.7E-25 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 AMC99_00596 8ff7d9b403afb6a294685cf396c362d4 378 SUPERFAMILY SSF53756 8 370 1.84E-55 T 11-10-2018 AMC99_00596 8ff7d9b403afb6a294685cf396c362d4 378 Pfam PF13439 Glycosyltransferase Family 4 18 180 6.1E-8 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMC99_00596 8ff7d9b403afb6a294685cf396c362d4 378 Gene3D G3DSA:3.40.50.2000 59 369 2.9E-49 T 11-10-2018 AMC99_00213 aafdcf8b6a6769702cecf1ed02a98661 184 SMART SM00347 18 113 0.0078 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMC99_00213 aafdcf8b6a6769702cecf1ed02a98661 184 SUPERFAMILY SSF46785 13 145 5.79E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00213 aafdcf8b6a6769702cecf1ed02a98661 184 Gene3D G3DSA:1.10.10.10 10 162 7.8E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00213 aafdcf8b6a6769702cecf1ed02a98661 184 Pfam PF01638 HxlR-like helix-turn-helix 22 109 5.1E-19 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AMC99_02399 fa7741514bf67372ef2d4da4fe92e9e5 513 Pfam PF00501 AMP-binding enzyme 5 407 1.3E-69 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_02399 fa7741514bf67372ef2d4da4fe92e9e5 513 SUPERFAMILY SSF56801 5 507 7.46E-124 T 11-10-2018 AMC99_02399 fa7741514bf67372ef2d4da4fe92e9e5 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 494 7.1E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_02399 fa7741514bf67372ef2d4da4fe92e9e5 513 Gene3D G3DSA:3.30.300.310 403 510 2.1E-28 T 11-10-2018 AMC99_02399 fa7741514bf67372ef2d4da4fe92e9e5 513 Gene3D G3DSA:3.40.50.12780 3 399 1.7E-92 T 11-10-2018 AMC99_02399 fa7741514bf67372ef2d4da4fe92e9e5 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 154 165 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_01511 40f301a0219cecc4b5980986230ce623 274 SUPERFAMILY SSF46689 218 266 9.86E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_01511 40f301a0219cecc4b5980986230ce623 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMC99_01511 40f301a0219cecc4b5980986230ce623 274 SMART SM00342 182 264 2.2E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_01511 40f301a0219cecc4b5980986230ce623 274 Gene3D G3DSA:1.10.10.60 162 268 6.1E-23 T 11-10-2018 AMC99_01511 40f301a0219cecc4b5980986230ce623 274 Pfam PF02311 AraC-like ligand binding domain 20 106 3.6E-17 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMC99_01511 40f301a0219cecc4b5980986230ce623 274 SUPERFAMILY SSF51215 29 127 3.79E-15 T 11-10-2018 IPR037923 Transcription regulator HTH-like AMC99_01511 40f301a0219cecc4b5980986230ce623 274 Pfam PF12833 Helix-turn-helix domain 190 265 3.0E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMC99_02101 0181320fa02c6344f0b2d3d5dc6d332e 330 SUPERFAMILY SSF48371 84 325 1.97E-19 T 11-10-2018 IPR016024 Armadillo-type fold AMC99_02101 0181320fa02c6344f0b2d3d5dc6d332e 330 SMART SM00567 E-Z type HEAT repeats 190 217 760.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AMC99_02101 0181320fa02c6344f0b2d3d5dc6d332e 330 SMART SM00567 E-Z type HEAT repeats 284 312 24.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AMC99_02101 0181320fa02c6344f0b2d3d5dc6d332e 330 SMART SM00567 E-Z type HEAT repeats 253 282 0.015 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AMC99_02101 0181320fa02c6344f0b2d3d5dc6d332e 330 SMART SM00567 E-Z type HEAT repeats 222 251 150.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 AMC99_02101 0181320fa02c6344f0b2d3d5dc6d332e 330 Gene3D G3DSA:1.25.10.10 186 329 2.5E-19 T 11-10-2018 IPR011989 Armadillo-like helical AMC99_02101 0181320fa02c6344f0b2d3d5dc6d332e 330 Pfam PF13646 HEAT repeats 210 294 4.4E-11 T 11-10-2018 AMC99_00396 26c7fc9b4c9cb7a5047af8ace20eb491 165 Pfam PF15655 NTF2 fold immunity protein 41 161 1.6E-5 T 11-10-2018 IPR028049 NTF2 fold immunity protein AMC99_02338 a9b644c358629c7dfd5bfd345f49f911 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 48 111 1.0E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMC99_02338 a9b644c358629c7dfd5bfd345f49f911 120 Gene3D G3DSA:3.10.180.10 1 117 6.0E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_02338 a9b644c358629c7dfd5bfd345f49f911 120 SUPERFAMILY SSF54593 2 117 1.06E-13 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMC99_01918 4f63983d0deb110387d0b1028ab07f45 326 SUPERFAMILY SSF56112 6 316 1.25E-71 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMC99_01918 4f63983d0deb110387d0b1028ab07f45 326 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 312 1.3E-97 T 11-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMC99_01918 4f63983d0deb110387d0b1028ab07f45 326 Gene3D G3DSA:3.90.1200.10 111 322 4.1E-63 T 11-10-2018 AMC99_01918 4f63983d0deb110387d0b1028ab07f45 326 Pfam PF01636 Phosphotransferase enzyme family 28 261 1.7E-33 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMC99_01918 4f63983d0deb110387d0b1028ab07f45 326 Gene3D G3DSA:3.30.200.20 1 109 1.1E-30 T 11-10-2018 AMC99_01918 4f63983d0deb110387d0b1028ab07f45 326 Hamap MF_00301 Homoserine kinase [thrB]. 1 326 119.448 T 11-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 AMC99_01737 f5f39e227e89cc13799bbee0b98dfcf6 43 Pfam PF08085 Entericidin EcnA/B family 23 42 3.6E-6 T 11-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 Gene3D G3DSA:2.40.37.10 266 367 2.2E-76 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 Gene3D G3DSA:3.20.20.10 43 265 2.2E-76 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 208 224 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 45 63 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 272 351 3.2E-6 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 257 276 5.9E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 66 78 5.9E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 45 63 5.9E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 355 368 5.9E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 176 189 5.9E-20 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 267 2.2E-35 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01182 Ornithine decarboxylase signature 43 70 8.4E-5 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01182 Ornithine decarboxylase signature 321 331 8.4E-5 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01182 Ornithine decarboxylase signature 342 355 8.4E-5 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 PRINTS PR01182 Ornithine decarboxylase signature 288 301 8.4E-5 T 11-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 SUPERFAMILY SSF51419 18 268 5.89E-48 T 11-10-2018 IPR029066 PLP-binding barrel AMC99_00894 f728752a7330ea62127d1e572b4de6b0 401 SUPERFAMILY SSF50621 228 384 4.4E-32 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 AMC99_02306 7325b315f58bd3b75635a08ab2b3e03f 273 SUPERFAMILY SSF102588 35 237 2.35E-38 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMC99_02306 7325b315f58bd3b75635a08ab2b3e03f 273 Gene3D G3DSA:3.40.50.10320 27 248 4.8E-42 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 AMC99_02306 7325b315f58bd3b75635a08ab2b3e03f 273 Pfam PF02585 GlcNAc-PI de-N-acetylase 38 170 4.4E-25 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 AMC99_01469 e5f224c8d35be8274d415522b7275d06 195 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 32 175 2.8E-32 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 AMC99_00008 a9e0c8742b46449cc261433d5b7cbbfb 443 SUPERFAMILY SSF103473 16 430 1.07E-38 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00008 a9e0c8742b46449cc261433d5b7cbbfb 443 Pfam PF07690 Major Facilitator Superfamily 23 390 7.0E-23 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_00008 a9e0c8742b46449cc261433d5b7cbbfb 443 Gene3D G3DSA:1.20.1250.20 12 427 3.9E-28 T 11-10-2018 AMC99_01293 5b6d08179e536cdd5a39616828f056fb 354 Pfam PF13480 Acetyltransferase (GNAT) domain 163 296 1.0E-17 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AMC99_01293 5b6d08179e536cdd5a39616828f056fb 354 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 29 353 2.8E-95 T 11-10-2018 IPR017469 PEP-CTERM system-associated, FemAB-related AMC99_01293 5b6d08179e536cdd5a39616828f056fb 354 Gene3D G3DSA:3.40.630.30 147 301 3.8E-16 T 11-10-2018 AMC99_01293 5b6d08179e536cdd5a39616828f056fb 354 SUPERFAMILY SSF55729 158 307 6.36E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01187 1db9c48589743be61997bd60acca958f 180 SUPERFAMILY SSF50182 107 165 5.84E-18 T 11-10-2018 IPR010920 LSM domain superfamily AMC99_01187 1db9c48589743be61997bd60acca958f 180 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 24 86 27.994 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMC99_01187 1db9c48589743be61997bd60acca958f 180 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 107 165 3.5E-20 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMC99_01187 1db9c48589743be61997bd60acca958f 180 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 27 86 4.2E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMC99_01187 1db9c48589743be61997bd60acca958f 180 SUPERFAMILY SSF50182 27 91 8.83E-23 T 11-10-2018 IPR010920 LSM domain superfamily AMC99_01187 1db9c48589743be61997bd60acca958f 180 Pfam PF17209 Hfq protein 107 169 5.4E-22 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMC99_01187 1db9c48589743be61997bd60acca958f 180 Pfam PF17209 Hfq protein 28 90 2.5E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 AMC99_01187 1db9c48589743be61997bd60acca958f 180 Gene3D G3DSA:2.30.30.100 18 94 8.3E-31 T 11-10-2018 AMC99_01187 1db9c48589743be61997bd60acca958f 180 Gene3D G3DSA:2.30.30.100 97 174 1.3E-23 T 11-10-2018 AMC99_02007 21ba941cec945895999c4dfa51f22520 103 Pfam PF11730 Protein of unknown function (DUF3297) 20 90 5.2E-37 T 11-10-2018 IPR021724 Protein of unknown function DUF3297 AMC99_02305 3dbae411aecbbac8e625da64be07364d 512 SUPERFAMILY SSF56801 11 508 1.14E-123 T 11-10-2018 AMC99_02305 3dbae411aecbbac8e625da64be07364d 512 Pfam PF00501 AMP-binding enzyme 19 412 3.3E-81 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 AMC99_02305 3dbae411aecbbac8e625da64be07364d 512 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 11-10-2018 IPR020845 AMP-binding, conserved site AMC99_02305 3dbae411aecbbac8e625da64be07364d 512 Gene3D G3DSA:3.40.50.12780 10 405 6.4E-89 T 11-10-2018 AMC99_02305 3dbae411aecbbac8e625da64be07364d 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 422 495 3.9E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain AMC99_02305 3dbae411aecbbac8e625da64be07364d 512 Gene3D G3DSA:3.30.300.310 408 509 1.8E-24 T 11-10-2018 AMC99_00616 95a26a2a93bcc100c185c7115441b00a 495 SUPERFAMILY SSF56935 107 352 7.87E-6 T 11-10-2018 AMC99_02715 8772b5eccda8356412b470c8499e911f 148 Pfam PF04273 Putative phosphatase (DUF442) 6 112 2.9E-29 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AMC99_02715 8772b5eccda8356412b470c8499e911f 148 Gene3D G3DSA:3.90.190.10 1 143 6.7E-38 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMC99_02715 8772b5eccda8356412b470c8499e911f 148 SUPERFAMILY SSF52799 4 122 7.06E-9 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMC99_02715 8772b5eccda8356412b470c8499e911f 148 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 6 138 1.7E-36 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AMC99_02609 9d31f9c8f0b0b94440975c2cb6bda50f 266 Pfam PF04230 Polysaccharide pyruvyl transferase 90 201 4.8E-10 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase AMC99_02396 4d2abcff41b3b1bf0620e1d4456a3e43 427 SUPERFAMILY SSF55205 1 426 3.01E-137 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMC99_02396 4d2abcff41b3b1bf0620e1d4456a3e43 427 Gene3D G3DSA:3.65.10.10 6 421 1.4E-161 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMC99_02396 4d2abcff41b3b1bf0620e1d4456a3e43 427 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 423 3.1E-165 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_02396 4d2abcff41b3b1bf0620e1d4456a3e43 427 Gene3D G3DSA:3.65.10.10 21 237 1.4E-161 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AMC99_02396 4d2abcff41b3b1bf0620e1d4456a3e43 427 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 43.147 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AMC99_02396 4d2abcff41b3b1bf0620e1d4456a3e43 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 1.2E-97 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AMC99_00744 5d876a0280bc032ed01209d0cbf52a77 229 Pfam PF07750 GcrA cell cycle regulator 1 89 9.0E-24 T 11-10-2018 IPR011681 GcrA cell cycle regulator AMC99_00744 5d876a0280bc032ed01209d0cbf52a77 229 Pfam PF07750 GcrA cell cycle regulator 157 209 7.4E-16 T 11-10-2018 IPR011681 GcrA cell cycle regulator AMC99_00744 5d876a0280bc032ed01209d0cbf52a77 229 Gene3D G3DSA:1.10.10.60 2 46 6.4E-9 T 11-10-2018 AMC99_01567 c15100cb9f290277529d094341512800 208 Pfam PF07811 TadE-like protein 15 57 1.1E-10 T 11-10-2018 IPR012495 TadE-like AMC99_01559 f3c5bbd086dc21aab5f92977468c6c30 209 Pfam PF00691 OmpA family 121 195 5.2E-6 T 11-10-2018 IPR006665 OmpA-like domain AMC99_01559 f3c5bbd086dc21aab5f92977468c6c30 209 SUPERFAMILY SSF103088 99 205 3.14E-14 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_01559 f3c5bbd086dc21aab5f92977468c6c30 209 Gene3D G3DSA:3.30.1330.60 86 206 3.5E-14 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_02250 252d9d94ba826d27d0c643a842f4991f 305 SUPERFAMILY SSF48179 174 284 9.98E-35 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AMC99_02250 252d9d94ba826d27d0c643a842f4991f 305 SUPERFAMILY SSF51735 5 170 3.82E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_02250 252d9d94ba826d27d0c643a842f4991f 305 Gene3D G3DSA:1.10.3660.10 177 284 1.5E-34 T 11-10-2018 AMC99_02250 252d9d94ba826d27d0c643a842f4991f 305 Gene3D G3DSA:3.40.50.720 1 176 1.1E-52 T 11-10-2018 AMC99_02250 252d9d94ba826d27d0c643a842f4991f 305 Pfam PF02153 Prephenate dehydrogenase 18 274 6.4E-75 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 SUPERFAMILY SSF48013 8 130 7.36E-15 T 11-10-2018 IPR035926 NusB-like superfamily AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 SUPERFAMILY SSF53335 180 414 2.26E-52 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 290 301 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 201 215 1.8E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 240 1.8E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 303 1.8E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 341 357 1.8E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 397 414 1.8E-24 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 Pfam PF01189 16S rRNA methyltransferase RsmB/F 225 411 3.0E-36 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 Pfam PF01029 NusB family 8 102 2.5E-7 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 Gene3D G3DSA:3.40.50.150 116 414 2.0E-60 T 11-10-2018 AMC99_02231 9ccfb688abfe282f07a35a34b0ac375a 415 Gene3D G3DSA:1.10.940.10 7 115 5.5E-11 T 11-10-2018 IPR035926 NusB-like superfamily AMC99_01036 c07c0dd4d2e0e163f414247ffbbc7d5d 348 Pfam PF04909 Amidohydrolase 13 342 2.3E-30 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMC99_01036 c07c0dd4d2e0e163f414247ffbbc7d5d 348 Gene3D G3DSA:3.20.20.140 10 345 7.8E-76 T 11-10-2018 AMC99_01036 c07c0dd4d2e0e163f414247ffbbc7d5d 348 SUPERFAMILY SSF51556 11 342 3.06E-38 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_01624 cbb7263e6287f43b6ebf841a5f3f3924 436 SUPERFAMILY SSF56601 46 421 6.93E-70 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_01624 cbb7263e6287f43b6ebf841a5f3f3924 436 Gene3D G3DSA:3.40.710.10 48 428 4.8E-97 T 11-10-2018 AMC99_01624 cbb7263e6287f43b6ebf841a5f3f3924 436 Pfam PF00144 Beta-lactamase 52 423 1.4E-51 T 11-10-2018 IPR001466 Beta-lactamase-related AMC99_01213 13b522edffab07a4ab44a11d7b36ccf5 287 SUPERFAMILY SSF50182 107 169 1.24E-14 T 11-10-2018 IPR010920 LSM domain superfamily AMC99_01213 13b522edffab07a4ab44a11d7b36ccf5 287 Gene3D G3DSA:3.30.70.100 174 268 7.1E-21 T 11-10-2018 AMC99_01213 13b522edffab07a4ab44a11d7b36ccf5 287 Pfam PF05552 Conserved TM helix 9 53 9.7E-7 T 11-10-2018 IPR008910 Conserved TM helix AMC99_01213 13b522edffab07a4ab44a11d7b36ccf5 287 SUPERFAMILY SSF82861 21 106 2.88E-9 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMC99_01213 13b522edffab07a4ab44a11d7b36ccf5 287 Pfam PF00924 Mechanosensitive ion channel 63 264 1.9E-45 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_01213 13b522edffab07a4ab44a11d7b36ccf5 287 Gene3D G3DSA:2.30.30.60 123 166 2.2E-10 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMC99_01213 13b522edffab07a4ab44a11d7b36ccf5 287 SUPERFAMILY SSF82689 176 274 1.7E-23 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMC99_02614 3a67b9dbdc6b095b2e893c9a1849128c 252 Pfam PF03567 Sulfotransferase family 89 237 1.2E-7 T 11-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 AMC99_02614 3a67b9dbdc6b095b2e893c9a1849128c 252 SUPERFAMILY SSF52540 44 238 5.31E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01226 9873d9018c874c487b7bf5e15b08567a 320 Pfam PF00561 alpha/beta hydrolase fold 42 299 2.3E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01226 9873d9018c874c487b7bf5e15b08567a 320 Gene3D G3DSA:3.40.50.1820 6 316 2.2E-90 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01226 9873d9018c874c487b7bf5e15b08567a 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 67 78 2.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_01226 9873d9018c874c487b7bf5e15b08567a 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 110 124 2.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_01226 9873d9018c874c487b7bf5e15b08567a 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 41 49 2.2E-13 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 AMC99_01226 9873d9018c874c487b7bf5e15b08567a 320 SUPERFAMILY SSF53474 4 299 2.52E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01226 9873d9018c874c487b7bf5e15b08567a 320 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 13 315 3.8E-109 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMC99_01226 9873d9018c874c487b7bf5e15b08567a 320 PIRSF PIRSF006431 3 319 5.0E-120 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 AMC99_00391 400037993706d98483e2bd6fe9541085 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00391 400037993706d98483e2bd6fe9541085 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00391 400037993706d98483e2bd6fe9541085 206 Gene3D G3DSA:1.10.357.10 3 198 1.7E-28 T 11-10-2018 AMC99_00391 400037993706d98483e2bd6fe9541085 206 SUPERFAMILY SSF48498 101 182 2.76E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMC99_00391 400037993706d98483e2bd6fe9541085 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.9E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMC99_00391 400037993706d98483e2bd6fe9541085 206 SUPERFAMILY SSF46689 3 75 2.57E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AMC99_00386 071496d59ae2d541bb7f12107e5b0b88 152 Gene3D G3DSA:3.10.129.10 6 150 1.4E-51 T 11-10-2018 AMC99_00386 071496d59ae2d541bb7f12107e5b0b88 152 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 28 141 9.9E-40 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 AMC99_00386 071496d59ae2d541bb7f12107e5b0b88 152 Pfam PF03061 Thioesterase superfamily 56 134 1.2E-14 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_00386 071496d59ae2d541bb7f12107e5b0b88 152 SUPERFAMILY SSF54637 18 145 5.05E-31 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_02802 5441e75c09cff062d8c2e9c72beab39d 76 Gene3D G3DSA:1.10.260.40 4 76 2.8E-10 T 11-10-2018 AMC99_02802 5441e75c09cff062d8c2e9c72beab39d 76 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 12 72 3.1E-20 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_02802 5441e75c09cff062d8c2e9c72beab39d 76 SMART SM00530 12 68 1.9E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMC99_02802 5441e75c09cff062d8c2e9c72beab39d 76 SUPERFAMILY SSF47413 8 74 4.74E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AMC99_01597 527202d8fd15819493817b8246e0251d 235 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 109 224 1.4E-26 T 11-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal AMC99_01597 527202d8fd15819493817b8246e0251d 235 Gene3D G3DSA:2.40.70.10 99 225 1.9E-30 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMC99_01597 527202d8fd15819493817b8246e0251d 235 Pfam PF13975 gag-polyprotein putative aspartyl protease 120 210 5.9E-19 T 11-10-2018 AMC99_01597 527202d8fd15819493817b8246e0251d 235 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 130 141 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AMC99_01597 527202d8fd15819493817b8246e0251d 235 SUPERFAMILY SSF50630 111 213 2.63E-17 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AMC99_02752 c00d3c56e630ecbe161619f768afbc88 276 Gene3D G3DSA:3.40.50.620 1 270 1.5E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02752 c00d3c56e630ecbe161619f768afbc88 276 SUPERFAMILY SSF52374 1 259 4.02E-76 T 11-10-2018 AMC99_02752 c00d3c56e630ecbe161619f768afbc88 276 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AMC99_02752 c00d3c56e630ecbe161619f768afbc88 276 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 258 7.3E-46 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AMC99_02752 c00d3c56e630ecbe161619f768afbc88 276 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 7.8E-12 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_02752 c00d3c56e630ecbe161619f768afbc88 276 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 7.8E-12 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_02752 c00d3c56e630ecbe161619f768afbc88 276 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 201 7.8E-12 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_02752 c00d3c56e630ecbe161619f768afbc88 276 PRINTS PR00987 Glutamyl-tRNA synthetase signature 177 187 7.8E-12 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AMC99_00237 ee029b0c9ad5cb13c12a27ec706c8e23 134 Pfam PF06170 Protein of unknown function (DUF983) 33 117 1.9E-25 T 11-10-2018 IPR009325 Protein of unknown function DUF983 AMC99_01295 0e1a4a75097ff7dbbc54f88dc50243ea 377 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 268 4.7E-99 T 11-10-2018 IPR017466 ATPase, secretion system, PEP-CTERM, predicted AMC99_01295 0e1a4a75097ff7dbbc54f88dc50243ea 377 SUPERFAMILY SSF52540 6 265 3.6E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01295 0e1a4a75097ff7dbbc54f88dc50243ea 377 Gene3D G3DSA:3.40.50.300 26 171 6.4E-7 T 11-10-2018 AMC99_01295 0e1a4a75097ff7dbbc54f88dc50243ea 377 Pfam PF13401 AAA domain 42 170 3.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain AMC99_02796 6164a276768fd6f948272a406a73d19e 156 Gene3D G3DSA:1.10.760.10 19 154 4.3E-38 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_02796 6164a276768fd6f948272a406a73d19e 156 Pfam PF00034 Cytochrome c 65 156 4.3E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_02796 6164a276768fd6f948272a406a73d19e 156 SUPERFAMILY SSF46626 64 156 1.8E-25 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_02796 6164a276768fd6f948272a406a73d19e 156 PRINTS PR00604 Class IA and IB cytochrome C signature 129 139 2.4E-18 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_02796 6164a276768fd6f948272a406a73d19e 156 PRINTS PR00604 Class IA and IB cytochrome C signature 68 75 2.4E-18 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_02796 6164a276768fd6f948272a406a73d19e 156 PRINTS PR00604 Class IA and IB cytochrome C signature 110 126 2.4E-18 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_02796 6164a276768fd6f948272a406a73d19e 156 PRINTS PR00604 Class IA and IB cytochrome C signature 146 154 2.4E-18 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_02796 6164a276768fd6f948272a406a73d19e 156 PRINTS PR00604 Class IA and IB cytochrome C signature 80 95 2.4E-18 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00126 01dd2c1bb8deebf682c106031e764206 404 Pfam PF13372 Alginate export 91 161 5.0E-7 T 11-10-2018 IPR025388 Alginate export domain AMC99_00508 7c7ca026c76c0fce49db3bb146c2e274 230 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 50 217 2.8E-22 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMC99_00508 7c7ca026c76c0fce49db3bb146c2e274 230 SUPERFAMILY SSF53098 39 216 1.14E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AMC99_00508 7c7ca026c76c0fce49db3bb146c2e274 230 Pfam PF00929 Exonuclease 51 209 1.7E-18 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMC99_00508 7c7ca026c76c0fce49db3bb146c2e274 230 SMART SM00479 48 219 3.0E-19 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AMC99_00508 7c7ca026c76c0fce49db3bb146c2e274 230 Gene3D G3DSA:3.30.420.10 46 220 2.4E-31 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AMC99_00439 4ae1299caa2dd37f4672d5176f19aa77 158 Gene3D G3DSA:3.30.420.270 69 139 1.2E-15 T 11-10-2018 AMC99_00439 4ae1299caa2dd37f4672d5176f19aa77 158 Pfam PF02472 Biopolymer transport protein ExbD/TolR 18 142 2.1E-28 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMC99_01211 91c1e2950183153e2bda84146f826244 79 Pfam PF04977 Septum formation initiator 4 78 1.3E-7 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AMC99_00132 d20d2b2bf3eb4fe4f928753e3ec23050 233 SUPERFAMILY SSF103501 4 227 2.88E-62 T 11-10-2018 IPR036197 NarG-like superfamily AMC99_00132 d20d2b2bf3eb4fe4f928753e3ec23050 233 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 4 228 3.4E-74 T 11-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 AMC99_00132 d20d2b2bf3eb4fe4f928753e3ec23050 233 Gene3D G3DSA:1.20.950.20 2 218 9.9E-78 T 11-10-2018 AMC99_00132 d20d2b2bf3eb4fe4f928753e3ec23050 233 Pfam PF02665 Nitrate reductase gamma subunit 7 227 3.0E-80 T 11-10-2018 IPR023234 NarG-like domain AMC99_01733 dd28f950756821541a1fc87341564adb 398 Pfam PF13692 Glycosyl transferases group 1 219 363 1.1E-15 T 11-10-2018 AMC99_01733 dd28f950756821541a1fc87341564adb 398 Gene3D G3DSA:3.40.50.2000 213 374 9.7E-22 T 11-10-2018 AMC99_01733 dd28f950756821541a1fc87341564adb 398 Pfam PF13439 Glycosyltransferase Family 4 34 205 2.2E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 AMC99_01733 dd28f950756821541a1fc87341564adb 398 SUPERFAMILY SSF53756 21 394 4.45E-42 T 11-10-2018 AMC99_01733 dd28f950756821541a1fc87341564adb 398 Gene3D G3DSA:3.40.50.2000 1 212 2.9E-16 T 11-10-2018 AMC99_01828 09ceaf97124e6f5d124a3a82e35dc5b7 120 Pfam PF01402 Ribbon-helix-helix protein, copG family 14 50 1.9E-4 T 11-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 AMC99_01961 d4044d1d94f42710d864b35c26a15a23 188 Gene3D G3DSA:3.10.50.40 34 178 1.9E-33 T 11-10-2018 AMC99_01961 d4044d1d94f42710d864b35c26a15a23 188 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 56 151 1.1E-18 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMC99_01961 d4044d1d94f42710d864b35c26a15a23 188 SUPERFAMILY SSF54534 9 158 2.16E-30 T 11-10-2018 AMC99_00276 f850084f8aee683d7febeb56a0cc48dc 293 Pfam PF00892 EamA-like transporter family 10 139 1.6E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_00276 f850084f8aee683d7febeb56a0cc48dc 293 Pfam PF00892 EamA-like transporter family 154 283 5.0E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_00276 f850084f8aee683d7febeb56a0cc48dc 293 SUPERFAMILY SSF103481 189 287 1.57E-12 T 11-10-2018 AMC99_00276 f850084f8aee683d7febeb56a0cc48dc 293 SUPERFAMILY SSF103481 49 142 2.88E-12 T 11-10-2018 AMC99_00697 40eebdb2efa996c7f8bc09e518e8ff0f 108 SUPERFAMILY SSF109635 6 77 7.98E-5 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily AMC99_00697 40eebdb2efa996c7f8bc09e518e8ff0f 108 SUPERFAMILY SSF57716 78 107 2.57E-7 T 11-10-2018 AMC99_00697 40eebdb2efa996c7f8bc09e518e8ff0f 108 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 76 107 7.7E-12 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AMC99_00697 40eebdb2efa996c7f8bc09e518e8ff0f 108 Gene3D G3DSA:1.20.120.910 2 108 2.3E-28 T 11-10-2018 AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 SMART SM00564 342 373 52.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 SMART SM00564 168 199 0.0017 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 SMART SM00564 208 239 9.1 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 SMART SM00564 252 284 86.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 SMART SM00564 392 423 600.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 SMART SM00564 304 335 70.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 SMART SM00564 121 152 4.5E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 Pfam PF13360 PQQ-like domain 134 371 2.6E-58 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 SUPERFAMILY SSF50998 70 442 5.76E-76 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMC99_00598 0c4f7f3e396a124059761d110cef93fe 452 Gene3D G3DSA:2.130.10.10 93 452 2.3E-82 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 63 265 37.703 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 PIRSF PIRSF001259 359 416 2.3E-8 T 11-10-2018 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 PIRSF PIRSF001259 64 362 2.9E-103 T 11-10-2018 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 SUPERFAMILY SSF142695 266 415 5.1E-37 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 Pfam PF00925 GTP cyclohydrolase II 362 413 1.3E-9 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 Pfam PF00925 GTP cyclohydrolase II 270 355 6.7E-12 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 SUPERFAMILY SSF55821 64 264 3.43E-84 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 69 260 3.5E-81 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 68 261 8.4E-71 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 Gene3D G3DSA:3.90.870.10 56 268 4.2E-85 T 11-10-2018 AMC99_01092 667c9f0a359fa764db2735dc1064b072 416 Gene3D G3DSA:3.40.50.10990 269 415 6.6E-26 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AMC99_00471 19e1b2e7c2fc9121dcaf10317ab53282 467 SUPERFAMILY SSF53474 31 446 1.18E-94 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00471 19e1b2e7c2fc9121dcaf10317ab53282 467 Gene3D G3DSA:3.40.50.1820 344 460 1.5E-11 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00471 19e1b2e7c2fc9121dcaf10317ab53282 467 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 209 224 - T 11-10-2018 IPR019826 Carboxylesterase type B, active site AMC99_00471 19e1b2e7c2fc9121dcaf10317ab53282 467 Gene3D G3DSA:3.40.50.1820 11 343 5.6E-93 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00471 19e1b2e7c2fc9121dcaf10317ab53282 467 Pfam PF00135 Carboxylesterase family 31 341 1.3E-74 T 11-10-2018 IPR002018 Carboxylesterase, type B AMC99_00471 19e1b2e7c2fc9121dcaf10317ab53282 467 Pfam PF00135 Carboxylesterase family 343 438 1.0E-6 T 11-10-2018 IPR002018 Carboxylesterase, type B AMC99_01203 97c809bc44e5fc1acdb68d04fd0229f6 464 SUPERFAMILY SSF51905 6 391 2.59E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01203 97c809bc44e5fc1acdb68d04fd0229f6 464 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 12 456 1.5E-164 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 AMC99_01203 97c809bc44e5fc1acdb68d04fd0229f6 464 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 361 384 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AMC99_01203 97c809bc44e5fc1acdb68d04fd0229f6 464 Gene3D G3DSA:3.50.50.60 10 187 1.9E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01203 97c809bc44e5fc1acdb68d04fd0229f6 464 Gene3D G3DSA:3.50.50.60 315 464 4.7E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AMC99_01203 97c809bc44e5fc1acdb68d04fd0229f6 464 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 13 457 34.497 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 AMC99_01203 97c809bc44e5fc1acdb68d04fd0229f6 464 Pfam PF01134 Glucose inhibited division protein A 12 391 1.1E-102 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AMC99_02129 8949838eb3ab9f155ee013ded6a6928f 190 Gene3D G3DSA:3.60.20.10 11 190 4.6E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_02129 8949838eb3ab9f155ee013ded6a6928f 190 SUPERFAMILY SSF56235 12 190 8.55E-55 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AMC99_02129 8949838eb3ab9f155ee013ded6a6928f 190 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 15 190 39.966 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMC99_02129 8949838eb3ab9f155ee013ded6a6928f 190 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 16 189 2.4E-78 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMC99_02129 8949838eb3ab9f155ee013ded6a6928f 190 PIRSF PIRSF039093 10 190 1.1E-78 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AMC99_02129 8949838eb3ab9f155ee013ded6a6928f 190 Pfam PF00227 Proteasome subunit 14 190 3.1E-24 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AMC99_02818 33e9ca9897bcfcc3b823b167f94551af 286 SUPERFAMILY SSF53474 3 279 2.49E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02818 33e9ca9897bcfcc3b823b167f94551af 286 Gene3D G3DSA:3.40.50.1820 2 278 1.3E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02818 33e9ca9897bcfcc3b823b167f94551af 286 Pfam PF12697 Alpha/beta hydrolase family 30 270 4.5E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_02818 33e9ca9897bcfcc3b823b167f94551af 286 PRINTS PR00412 Epoxide hydrolase signature 254 276 8.9E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_02818 33e9ca9897bcfcc3b823b167f94551af 286 PRINTS PR00412 Epoxide hydrolase signature 54 69 8.9E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_02818 33e9ca9897bcfcc3b823b167f94551af 286 PRINTS PR00412 Epoxide hydrolase signature 34 52 8.9E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 AMC99_00848 aa0c3dc1c52561ecacadb446eb79c5df 180 Gene3D G3DSA:3.90.79.10 9 171 6.0E-38 T 11-10-2018 AMC99_00848 aa0c3dc1c52561ecacadb446eb79c5df 180 Pfam PF00293 NUDIX domain 36 108 6.0E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_00848 aa0c3dc1c52561ecacadb446eb79c5df 180 SUPERFAMILY SSF55811 26 157 1.76E-30 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMC99_00018 1b2b339b5ef79469715e46cd7a8eeb7c 148 Pfam PF04273 Putative phosphatase (DUF442) 54 108 6.6E-9 T 11-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 AMC99_00018 1b2b339b5ef79469715e46cd7a8eeb7c 148 Gene3D G3DSA:3.90.190.10 5 147 1.2E-26 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMC99_00018 1b2b339b5ef79469715e46cd7a8eeb7c 148 SUPERFAMILY SSF52799 9 116 2.34E-8 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like AMC99_00502 cd5c35dc2411f10a29132460fa3eb3b9 448 Gene3D G3DSA:1.10.2020.10 34 129 5.1E-130 T 11-10-2018 AMC99_00502 cd5c35dc2411f10a29132460fa3eb3b9 448 SUPERFAMILY SSF51556 4 447 1.29E-156 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_00502 cd5c35dc2411f10a29132460fa3eb3b9 448 Hamap MF_00675 Uronate isomerase [uxaC]. 2 448 38.156 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AMC99_00502 cd5c35dc2411f10a29132460fa3eb3b9 448 Pfam PF02614 Glucuronate isomerase 3 444 5.5E-75 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 AMC99_00502 cd5c35dc2411f10a29132460fa3eb3b9 448 Gene3D G3DSA:3.20.20.140 14 421 5.1E-130 T 11-10-2018 AMC99_01155 bc145b6570c30eaf1796b32c96e1510c 162 Pfam PF00583 Acetyltransferase (GNAT) family 32 138 4.4E-18 T 11-10-2018 IPR000182 GNAT domain AMC99_01155 bc145b6570c30eaf1796b32c96e1510c 162 SUPERFAMILY SSF55729 1 148 8.06E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_01155 bc145b6570c30eaf1796b32c96e1510c 162 Gene3D G3DSA:3.40.630.30 2 144 8.3E-28 T 11-10-2018 AMC99_01278 9150800e1322f88a1b39ed02e283a4db 211 SUPERFAMILY SSF53335 31 201 1.84E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01278 9150800e1322f88a1b39ed02e283a4db 211 Gene3D G3DSA:3.40.50.150 32 196 3.3E-30 T 11-10-2018 AMC99_01278 9150800e1322f88a1b39ed02e283a4db 211 Pfam PF08241 Methyltransferase domain 42 137 2.8E-22 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AMC99_00352 882de9fe3bca1861ee30ff1c8a6dc294 50 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 4 45 1.3E-21 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AMC99_00352 882de9fe3bca1861ee30ff1c8a6dc294 50 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 4 49 1.9E-21 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type AMC99_00927 c84d91477cfe6edc9a41adeb0bc6315a 121 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 16 120 1.6E-41 T 11-10-2018 IPR008231 Probable chaperone CsaA AMC99_00927 c84d91477cfe6edc9a41adeb0bc6315a 121 Pfam PF01588 Putative tRNA binding domain 23 118 7.1E-12 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AMC99_00927 c84d91477cfe6edc9a41adeb0bc6315a 121 Gene3D G3DSA:2.40.50.140 7 121 1.9E-32 T 11-10-2018 AMC99_00927 c84d91477cfe6edc9a41adeb0bc6315a 121 SUPERFAMILY SSF50249 12 120 7.35E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AMC99_01440 9d344fe27def10f35f746359f2d6ab52 210 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 205 5.8E-45 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AMC99_01440 9d344fe27def10f35f746359f2d6ab52 210 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 210 36.422 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 AMC99_01440 9d344fe27def10f35f746359f2d6ab52 210 SUPERFAMILY SSF51366 4 207 2.35E-57 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AMC99_01440 9d344fe27def10f35f746359f2d6ab52 210 Gene3D G3DSA:3.20.20.70 1 210 6.1E-60 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_02345 7c3c4bf3f249c5e90ea8438cd855f263 138 Gene3D G3DSA:3.30.160.20 6 137 2.9E-31 T 11-10-2018 AMC99_02345 7c3c4bf3f249c5e90ea8438cd855f263 138 SUPERFAMILY SSF75620 17 110 8.63E-6 T 11-10-2018 AMC99_02345 7c3c4bf3f249c5e90ea8438cd855f263 138 Pfam PF00472 RF-1 domain 14 130 3.0E-18 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMC99_00583 4d364830184142a1938e578579eb4c28 59 Pfam PF01016 Ribosomal L27 protein 1 51 3.0E-22 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00583 4d364830184142a1938e578579eb4c28 59 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 1 40 1.0E-15 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AMC99_00583 4d364830184142a1938e578579eb4c28 59 Gene3D G3DSA:2.40.50.100 1 59 5.5E-25 T 11-10-2018 AMC99_00583 4d364830184142a1938e578579eb4c28 59 SUPERFAMILY SSF110324 1 51 1.67E-20 T 11-10-2018 AMC99_01488 d5137cfe1fc8b501223e938666d1494e 143 Pfam PF07452 CHRD domain 47 141 1.5E-18 T 11-10-2018 IPR010895 CHRD AMC99_01488 d5137cfe1fc8b501223e938666d1494e 143 SMART SM00754 24 143 6.1E-12 T 11-10-2018 IPR010895 CHRD AMC99_01456 33cd14738d8030d6b17dd5aea30b0005 261 Pfam PF07277 SapC 19 238 1.6E-68 T 11-10-2018 IPR010836 SapC AMC99_01297 2d76ed0d1c786ad082ef6147b540034a 231 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 41 149 3.0E-9 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMC99_01297 2d76ed0d1c786ad082ef6147b540034a 231 Gene3D G3DSA:3.40.50.300 2 231 7.5E-45 T 11-10-2018 AMC99_01297 2d76ed0d1c786ad082ef6147b540034a 231 SUPERFAMILY SSF52540 39 203 2.83E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01323 af3e1be56c96c20e2b5d190e6bf0b80d 414 Pfam PF04235 Protein of unknown function (DUF418) 237 402 1.3E-40 T 11-10-2018 IPR007349 Domain of unknown function DUF418 AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 Gene3D G3DSA:3.90.226.10 305 526 8.8E-138 T 11-10-2018 AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 SUPERFAMILY SSF52096 312 515 3.73E-36 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 20 589 8.6E-147 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 PIRSF PIRSF001217 1 605 1.5E-157 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 339 524 2.1E-46 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 Gene3D G3DSA:3.90.226.10 82 303 8.8E-138 T 11-10-2018 AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 Gene3D G3DSA:3.40.1750.10 173 484 8.8E-138 T 11-10-2018 AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 SUPERFAMILY SSF52096 26 269 1.49E-21 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 Pfam PF01343 Peptidase family S49 126 281 7.0E-20 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMC99_02018 6be5056686a0c9da649137e67af92ab2 628 Pfam PF01343 Peptidase family S49 378 528 1.4E-42 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMC99_01214 1802b40a60876c7e52f20e8531d30ed7 404 Gene3D G3DSA:1.20.1250.20 19 400 9.3E-36 T 11-10-2018 AMC99_01214 1802b40a60876c7e52f20e8531d30ed7 404 SUPERFAMILY SSF103473 24 401 6.8E-43 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_01214 1802b40a60876c7e52f20e8531d30ed7 404 Pfam PF07690 Major Facilitator Superfamily 32 328 1.4E-29 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_00532 8f32519196a5b7404d05f33af3b1c59b 392 Pfam PF13480 Acetyltransferase (GNAT) domain 208 332 7.8E-20 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 AMC99_00532 8f32519196a5b7404d05f33af3b1c59b 392 SUPERFAMILY SSF55729 199 346 5.3E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02382 0f94850d3adfef5f4e597d6d93c4994f 261 SUPERFAMILY SSF52096 3 255 1.84E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02382 0f94850d3adfef5f4e597d6d93c4994f 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 241 1.2E-52 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_02382 0f94850d3adfef5f4e597d6d93c4994f 261 Gene3D G3DSA:3.90.226.10 1 241 2.1E-72 T 11-10-2018 AMC99_00200 5d45c79f0c86b15b2d9cea225a4cfee2 114 Pfam PF01192 RNA polymerase Rpb6 8 58 1.0E-13 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMC99_00200 5d45c79f0c86b15b2d9cea225a4cfee2 114 SUPERFAMILY SSF63562 1 79 4.32E-21 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMC99_00200 5d45c79f0c86b15b2d9cea225a4cfee2 114 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 2.5E-18 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_00200 5d45c79f0c86b15b2d9cea225a4cfee2 114 SMART SM01409 8 60 5.9E-15 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMC99_00200 5d45c79f0c86b15b2d9cea225a4cfee2 114 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.384 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMC99_00200 5d45c79f0c86b15b2d9cea225a4cfee2 114 Gene3D G3DSA:3.90.940.10 1 94 5.8E-24 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AMC99_01007 602550764a8dbb14dba4cc5a9194e288 541 Gene3D G3DSA:1.25.40.10 371 535 1.1E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01007 602550764a8dbb14dba4cc5a9194e288 541 Gene3D G3DSA:1.25.40.10 80 195 5.0E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01007 602550764a8dbb14dba4cc5a9194e288 541 SUPERFAMILY SSF48452 224 428 9.48E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01007 602550764a8dbb14dba4cc5a9194e288 541 SUPERFAMILY SSF48452 106 495 2.35E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01007 602550764a8dbb14dba4cc5a9194e288 541 Gene3D G3DSA:1.25.40.10 204 351 6.3E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00706 b8f4bfc3a831789b57d2daf240e9a5ca 141 Gene3D G3DSA:1.10.8.640 32 114 8.9E-29 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AMC99_00706 b8f4bfc3a831789b57d2daf240e9a5ca 141 Pfam PF03918 Cytochrome C biogenesis protein 30 138 9.2E-39 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AMC99_02272 f7482f008a5c064e00bc3886a0335c23 203 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 188 1.6E-26 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMC99_02272 f7482f008a5c064e00bc3886a0335c23 203 SUPERFAMILY SSF88697 4 188 2.09E-44 T 11-10-2018 IPR015947 PUA-like superfamily AMC99_02272 f7482f008a5c064e00bc3886a0335c23 203 Gene3D G3DSA:2.30.130.40 1 109 2.9E-28 T 11-10-2018 AMC99_02272 f7482f008a5c064e00bc3886a0335c23 203 SMART SM00464 4 189 2.6E-18 T 11-10-2018 IPR003111 Lon, substrate-binding domain AMC99_01732 6c009214d52e6f6621fd23b64b5b0b1d 368 Pfam PF04230 Polysaccharide pyruvyl transferase 18 223 8.5E-15 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase AMC99_02599 2e40bdb4d93323a2ff9c69ffd3fc7626 292 SUPERFAMILY SSF53448 4 289 7.21E-86 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_02599 2e40bdb4d93323a2ff9c69ffd3fc7626 292 Pfam PF00483 Nucleotidyl transferase 5 240 9.5E-65 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 AMC99_02599 2e40bdb4d93323a2ff9c69ffd3fc7626 292 Gene3D G3DSA:3.90.550.10 2 292 4.4E-83 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_02599 2e40bdb4d93323a2ff9c69ffd3fc7626 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 4.1E-137 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 AMC99_00897 089c5c8b1421b7bcc68a09b6fadb815d 285 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 17 275 1.4E-62 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AMC99_00897 089c5c8b1421b7bcc68a09b6fadb815d 285 Gene3D G3DSA:3.60.130.10 4 285 6.0E-89 T 11-10-2018 AMC99_00897 089c5c8b1421b7bcc68a09b6fadb815d 285 SUPERFAMILY SSF51197 15 283 1.47E-90 T 11-10-2018 AMC99_02148 2ebe462a0873f915b84f43426f859124 180 Gene3D G3DSA:3.40.630.30 1 175 3.7E-36 T 11-10-2018 AMC99_02148 2ebe462a0873f915b84f43426f859124 180 SUPERFAMILY SSF55729 4 169 1.15E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_02148 2ebe462a0873f915b84f43426f859124 180 Pfam PF13302 Acetyltransferase (GNAT) domain 11 145 4.9E-23 T 11-10-2018 IPR000182 GNAT domain AMC99_02816 b6b9022253ea8f240705dbb6521ad74d 78 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 6 76 1.0E-35 T 11-10-2018 IPR018753 Azospirillum phage Cd, Gp10 AMC99_01970 276550a27a75f2ffa37132c71edb0968 315 Pfam PF02470 MlaD protein 38 101 1.8E-9 T 11-10-2018 IPR003399 Mce/MlaD AMC99_00906 a22bb9452aa3c116c5d201baa31b1454 132 Pfam PF00072 Response regulator receiver domain 16 126 1.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00906 a22bb9452aa3c116c5d201baa31b1454 132 Gene3D G3DSA:3.40.50.12740 14 131 2.0E-38 T 11-10-2018 AMC99_00906 a22bb9452aa3c116c5d201baa31b1454 132 SMART SM00448 13 126 2.2E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00906 a22bb9452aa3c116c5d201baa31b1454 132 SUPERFAMILY SSF52172 13 129 1.85E-36 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01902 e25100c63af625db088100bcaa5fe191 712 Gene3D G3DSA:2.40.160.50 383 712 1.7E-61 T 11-10-2018 AMC99_01902 e25100c63af625db088100bcaa5fe191 712 Pfam PF01103 Surface antigen 415 712 1.0E-31 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 PIRSF PIRSF002869 1 531 1.3E-125 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 485 17.093 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 157 178 1.3E-64 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 266 292 1.3E-64 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 33 52 1.3E-64 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 427 444 1.3E-64 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 133 157 1.3E-64 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 52 68 1.3E-64 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 PRINTS PR01806 Virulence factor MviN signature 364 383 1.3E-64 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 516 1.6E-112 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00251 b084711ed1829553ce7e5efcf25a312e 534 Pfam PF03023 MviN-like protein 29 495 1.2E-101 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AMC99_00347 bc324a4164e729a737e7b4e2fe5c7847 128 Gene3D G3DSA:3.30.1330.40 3 128 1.9E-32 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMC99_00347 bc324a4164e729a737e7b4e2fe5c7847 128 SUPERFAMILY SSF55298 4 127 5.34E-33 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 AMC99_00347 bc324a4164e729a737e7b4e2fe5c7847 128 Pfam PF01042 Endoribonuclease L-PSP 18 126 3.2E-23 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 AMC99_02561 12e82134ed59d42d218d2925af23d646 275 SUPERFAMILY SSF52540 48 267 1.92E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02561 12e82134ed59d42d218d2925af23d646 275 Pfam PF05673 Protein of unknown function (DUF815) 30 270 3.8E-74 T 11-10-2018 IPR008533 Domain of unknown function DUF815 AMC99_02561 12e82134ed59d42d218d2925af23d646 275 Gene3D G3DSA:3.40.50.300 51 184 7.0E-6 T 11-10-2018 AMC99_02803 144d4dd8c8c03338b727708ea16cce60 175 Pfam PF11188 Protein of unknown function (DUF2975) 54 175 2.2E-12 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 AMC99_01347 59fd0f24dc8d0c961b4809f2b45d88c5 461 PIRSF PIRSF004548 1 459 3.7E-119 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AMC99_01347 59fd0f24dc8d0c961b4809f2b45d88c5 461 Pfam PF06123 Inner membrane protein CreD 1 448 1.2E-120 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD AMC99_02199 5b633ac0ffb8023974a4980cf5a8b5e6 233 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 57 202 3.8E-23 T 11-10-2018 IPR006342 Methyltransferase FkbM AMC99_02199 5b633ac0ffb8023974a4980cf5a8b5e6 233 Pfam PF05050 Methyltransferase FkbM domain 59 214 3.5E-10 T 11-10-2018 IPR006342 Methyltransferase FkbM AMC99_02199 5b633ac0ffb8023974a4980cf5a8b5e6 233 SUPERFAMILY SSF53335 44 187 4.65E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02199 5b633ac0ffb8023974a4980cf5a8b5e6 233 Gene3D G3DSA:3.40.50.150 41 225 3.4E-26 T 11-10-2018 AMC99_01571 2ea6aaeac00be13c53b3219f0434297b 324 Pfam PF00482 Type II secretion system (T2SS), protein F 177 304 3.5E-19 T 11-10-2018 IPR018076 Type II secretion system F domain AMC99_01194 a4c731bac9e3b33429a304aec8db84df 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 19 165 1.9E-43 T 11-10-2018 IPR008136 CinA, C-terminal AMC99_01194 a4c731bac9e3b33429a304aec8db84df 167 Pfam PF02464 Competence-damaged protein 13 166 1.3E-53 T 11-10-2018 IPR008136 CinA, C-terminal AMC99_01194 a4c731bac9e3b33429a304aec8db84df 167 SUPERFAMILY SSF142433 8 166 9.94E-52 T 11-10-2018 IPR036653 CinA-like, C-terminal AMC99_01194 a4c731bac9e3b33429a304aec8db84df 167 Gene3D G3DSA:3.90.950.20 4 167 4.4E-56 T 11-10-2018 IPR036653 CinA-like, C-terminal AMC99_00484 a58f1d6fabc900903247e9e1ae00340f 504 Gene3D G3DSA:1.20.1250.20 249 476 1.2E-8 T 11-10-2018 AMC99_00484 a58f1d6fabc900903247e9e1ae00340f 504 Gene3D G3DSA:1.20.1250.20 22 226 2.8E-10 T 11-10-2018 AMC99_00484 a58f1d6fabc900903247e9e1ae00340f 504 SUPERFAMILY SSF103473 25 470 1.7E-29 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00484 a58f1d6fabc900903247e9e1ae00340f 504 Pfam PF13347 MFS/sugar transport protein 26 472 1.4E-89 T 11-10-2018 AMC99_00259 c24ee8b59c362ddf6825a7e99287b102 299 Pfam PF04397 LytTr DNA-binding domain 210 296 8.6E-15 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_00259 c24ee8b59c362ddf6825a7e99287b102 299 SMART SM00850 202 298 1.7E-15 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 AMC99_02514 4efadb2f69fe97d21e6f6ac73cfc434d 173 SUPERFAMILY SSF54211 48 173 4.93E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AMC99_02514 4efadb2f69fe97d21e6f6ac73cfc434d 173 Gene3D G3DSA:3.30.230.10 45 173 1.5E-50 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMC99_02514 4efadb2f69fe97d21e6f6ac73cfc434d 173 Pfam PF00380 Ribosomal protein S9/S16 53 173 9.4E-46 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMC99_02514 4efadb2f69fe97d21e6f6ac73cfc434d 173 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 44 173 32.312 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AMC99_00083 06bed02e9f5f8545d505fd3434e74458 71 SUPERFAMILY SSF46955 18 69 1.19E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AMC99_00083 06bed02e9f5f8545d505fd3434e74458 71 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 17 66 9.4E-23 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA AMC99_01621 b32c7049e947171860ba0e878be02366 130 PIRSF PIRSF032025 1 130 1.3E-30 T 11-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 AMC99_01621 b32c7049e947171860ba0e878be02366 130 Pfam PF07370 Protein of unknown function (DUF1489) 5 130 1.6E-38 T 11-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 AMC99_02370 0ba42dc6b041bac021ca7de7411e3446 542 PIRSF PIRSF006060 31 533 5.9E-76 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_02370 0ba42dc6b041bac021ca7de7411e3446 542 Pfam PF13520 Amino acid permease 47 491 1.7E-48 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 AMC99_02370 0ba42dc6b041bac021ca7de7411e3446 542 Gene3D G3DSA:1.20.1740.10 38 526 4.1E-101 T 11-10-2018 AMC99_00029 4fdd86837d420399561611d8bf9fc5c3 1415 SUPERFAMILY SSF53335 117 289 1.23E-11 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00029 4fdd86837d420399561611d8bf9fc5c3 1415 Gene3D G3DSA:3.40.50.150 111 282 5.7E-7 T 11-10-2018 AMC99_00029 4fdd86837d420399561611d8bf9fc5c3 1415 Pfam PF13871 C-terminal domain on Strawberry notch homologue 888 1141 9.6E-89 T 11-10-2018 IPR026937 Strawberry notch, helicase C domain AMC99_00029 4fdd86837d420399561611d8bf9fc5c3 1415 Pfam PF13872 P-loop containing NTP hydrolase pore-1 397 714 7.3E-113 T 11-10-2018 IPR039187 Strawberry notch, AAA domain AMC99_00029 4fdd86837d420399561611d8bf9fc5c3 1415 Gene3D G3DSA:3.40.50.300 454 639 2.0E-7 T 11-10-2018 AMC99_00029 4fdd86837d420399561611d8bf9fc5c3 1415 SUPERFAMILY SSF52540 421 670 3.9E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00543 2116809c9e922a679addc3875300fca6 224 SUPERFAMILY SSF53597 4 192 1.83E-20 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMC99_00543 2116809c9e922a679addc3875300fca6 224 Gene3D G3DSA:3.40.430.10 2 191 9.8E-29 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AMC99_00543 2116809c9e922a679addc3875300fca6 224 Pfam PF01872 RibD C-terminal domain 5 186 4.4E-16 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMC99_02526 dc405d2c84d5607e1c7aeeaad21e8f2c 163 Pfam PF10691 Protein of unknown function (DUF2497) 86 159 2.5E-25 T 11-10-2018 IPR019632 Protein of unknown function DUF2497 AMC99_01868 aa7246a302b82c83449da973bc31fd7d 356 Pfam PF00953 Glycosyl transferase family 4 99 280 2.5E-32 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AMC99_01868 aa7246a302b82c83449da973bc31fd7d 356 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01868 aa7246a302b82c83449da973bc31fd7d 356 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 356 1.1E-123 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01868 aa7246a302b82c83449da973bc31fd7d 356 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.2E-5 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01868 aa7246a302b82c83449da973bc31fd7d 356 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 24 354 24.509 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01868 aa7246a302b82c83449da973bc31fd7d 356 ProSitePatterns PS01348 MraY family signature 2. 185 196 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_00283 d9f32767fe992b71ed3415dd5cb02231 188 Gene3D G3DSA:3.40.630.30 17 187 2.9E-39 T 11-10-2018 AMC99_00283 d9f32767fe992b71ed3415dd5cb02231 188 SUPERFAMILY SSF55729 17 186 2.23E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AMC99_00283 d9f32767fe992b71ed3415dd5cb02231 188 Pfam PF13673 Acetyltransferase (GNAT) domain 46 167 1.7E-15 T 11-10-2018 IPR000182 GNAT domain AMC99_01808 b96f102c905932ac77ec1f6b2ddc0896 345 SUPERFAMILY SSF53474 89 319 8.38E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01808 b96f102c905932ac77ec1f6b2ddc0896 345 Pfam PF07859 alpha/beta hydrolase fold 116 312 1.7E-16 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 AMC99_01808 b96f102c905932ac77ec1f6b2ddc0896 345 Gene3D G3DSA:3.40.50.1820 48 339 6.6E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01774 80edbc27578b1b9fff8352112dfa86bd 129 Pfam PF12200 Domain of unknown function (DUF3597) 3 124 1.6E-38 T 11-10-2018 IPR022016 Domain of unknown function DUF3597 AMC99_01774 80edbc27578b1b9fff8352112dfa86bd 129 SUPERFAMILY SSF158634 1 128 4.45E-41 T 11-10-2018 AMC99_01362 de026ab30d8551ac4ee212255faf4b9d 161 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 4 158 3.7E-22 T 11-10-2018 IPR018681 Protein of unknown function DUF2165, transmembrane AMC99_00917 7714462637ea4a588abb8dafddd141fb 339 SUPERFAMILY SSF51735 4 331 4.03E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AMC99_00917 7714462637ea4a588abb8dafddd141fb 339 Gene3D G3DSA:3.40.50.720 1 339 1.7E-79 T 11-10-2018 AMC99_00917 7714462637ea4a588abb8dafddd141fb 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 243 1.4E-21 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AMC99_00985 3fb910a2eabcf898dc587d57d0812cf4 142 Gene3D G3DSA:3.10.450.50 1 123 2.5E-16 T 11-10-2018 AMC99_00985 3fb910a2eabcf898dc587d57d0812cf4 142 SUPERFAMILY SSF54427 3 118 2.72E-10 T 11-10-2018 IPR032710 NTF2-like domain superfamily AMC99_00985 3fb910a2eabcf898dc587d57d0812cf4 142 Pfam PF14534 Domain of unknown function (DUF4440) 8 117 2.1E-9 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 AMC99_00079 715a6172343e5e439574a91ab26e3d07 189 Pfam PF05309 TraE protein 1 179 1.7E-55 T 11-10-2018 IPR007973 Pilus assembly TraE GO:0000746 AMC99_02532 f1868157ae2c579a36f492e76b485b73 224 Pfam PF07486 Cell Wall Hydrolase 119 223 2.9E-27 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 AMC99_02532 f1868157ae2c579a36f492e76b485b73 224 Gene3D G3DSA:1.10.10.2520 103 186 4.7E-23 T 11-10-2018 AMC99_00028 c30d3198f9c4dac9a7e17c64796bede0 149 Pfam PF13362 Toprim domain 55 142 2.6E-12 T 11-10-2018 IPR006171 TOPRIM domain AMC99_00485 493638cc2c27e7a42243543a5927625c 434 Gene3D G3DSA:1.10.540.10 1 130 1.3E-32 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 AMC99_00485 493638cc2c27e7a42243543a5927625c 434 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 391 3.0E-25 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMC99_00485 493638cc2c27e7a42243543a5927625c 434 SUPERFAMILY SSF47203 239 397 1.22E-32 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 AMC99_00485 493638cc2c27e7a42243543a5927625c 434 Gene3D G3DSA:1.20.140.10 246 400 1.3E-26 T 11-10-2018 AMC99_00485 493638cc2c27e7a42243543a5927625c 434 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 229 1.3E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 AMC99_00485 493638cc2c27e7a42243543a5927625c 434 Gene3D G3DSA:2.40.110.10 132 245 2.6E-36 T 11-10-2018 AMC99_00485 493638cc2c27e7a42243543a5927625c 434 SUPERFAMILY SSF56645 3 254 7.59E-68 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 AMC99_00485 493638cc2c27e7a42243543a5927625c 434 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 129 4.2E-14 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 AMC99_01500 34a2c3f3ef6c9d45b5e73650999e2c3d 317 Pfam PF01032 FecCD transport family 11 311 1.1E-71 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 AMC99_01500 34a2c3f3ef6c9d45b5e73650999e2c3d 317 Gene3D G3DSA:1.10.3470.10 1 314 8.9E-80 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMC99_01500 34a2c3f3ef6c9d45b5e73650999e2c3d 317 SUPERFAMILY SSF81345 5 311 5.49E-66 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AMC99_02673 2724d96d5c540cc565ae4173499485c3 275 SUPERFAMILY SSF52540 12 236 2.33E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02673 2724d96d5c540cc565ae4173499485c3 275 Pfam PF09140 ATPase MipZ 13 263 7.0E-116 T 11-10-2018 IPR015223 ATPase MipZ AMC99_02673 2724d96d5c540cc565ae4173499485c3 275 Gene3D G3DSA:3.40.50.300 11 273 1.7E-66 T 11-10-2018 AMC99_00921 14b1dbebfe28e9d6f3ae211779238334 262 Gene3D G3DSA:3.90.226.10 1 203 1.3E-63 T 11-10-2018 AMC99_00921 14b1dbebfe28e9d6f3ae211779238334 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 261 5.3E-58 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_00921 14b1dbebfe28e9d6f3ae211779238334 262 Gene3D G3DSA:1.10.12.10 205 262 1.7E-16 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMC99_00921 14b1dbebfe28e9d6f3ae211779238334 262 SUPERFAMILY SSF52096 2 261 3.98E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02462 810bc4d9c9b4b2450dbaecf301d69293 170 PIRSF PIRSF031796 7 168 1.4E-35 T 11-10-2018 IPR009394 DNA repair protein MmcB-like AMC99_02462 810bc4d9c9b4b2450dbaecf301d69293 170 Pfam PF06319 DNA repair protein MmcB-like 21 161 1.8E-36 T 11-10-2018 IPR009394 DNA repair protein MmcB-like AMC99_02462 810bc4d9c9b4b2450dbaecf301d69293 170 Gene3D G3DSA:3.40.1350.10 12 167 1.1E-47 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMC99_02347 17538b32cbb883e62a169fd118377ace 221 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 52 211 6.8E-24 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AMC99_02347 17538b32cbb883e62a169fd118377ace 221 SUPERFAMILY SSF89392 43 214 1.26E-29 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMC99_02347 17538b32cbb883e62a169fd118377ace 221 Gene3D G3DSA:2.50.20.10 42 217 1.1E-24 T 11-10-2018 AMC99_02565 19fbe495ac123fc78e9e8d1460e62ed6 177 SMART SM01058 7 117 1.0E-35 T 11-10-2018 IPR003711 CarD-like/TRCF domain AMC99_02565 19fbe495ac123fc78e9e8d1460e62ed6 177 Gene3D G3DSA:2.30.30.840 1 68 5.4E-25 T 11-10-2018 AMC99_02565 19fbe495ac123fc78e9e8d1460e62ed6 177 SUPERFAMILY SSF141259 6 73 8.5E-18 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily AMC99_02565 19fbe495ac123fc78e9e8d1460e62ed6 177 Gene3D G3DSA:1.20.58.1290 69 164 2.6E-24 T 11-10-2018 AMC99_02565 19fbe495ac123fc78e9e8d1460e62ed6 177 Pfam PF02559 CarD-like/TRCF domain 8 115 6.1E-20 T 11-10-2018 IPR003711 CarD-like/TRCF domain AMC99_02060 9e64d8136343d1f14399332af0c3a6a1 208 Gene3D G3DSA:3.40.50.150 38 203 1.4E-10 T 11-10-2018 AMC99_02060 9e64d8136343d1f14399332af0c3a6a1 208 Pfam PF13649 Methyltransferase domain 66 165 3.6E-6 T 11-10-2018 AMC99_02060 9e64d8136343d1f14399332af0c3a6a1 208 SUPERFAMILY SSF53335 28 180 1.1E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_01131 a2ddf62cd326a293aca26b111ceeb483 214 Pfam PF09951 Protein of unknown function (DUF2185) 119 206 2.8E-6 T 11-10-2018 IPR018689 Domain of unknown function DUF2185 AMC99_01131 a2ddf62cd326a293aca26b111ceeb483 214 Pfam PF10077 Uncharacterized protein conserved in bacteria (DUF2314) 31 95 1.1E-5 T 11-10-2018 IPR018756 Domain of unknown function DUF2314 AMC99_00750 316f344270e834414f0226e5b088f65b 482 SUPERFAMILY SSF103473 22 458 1.18E-22 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00750 316f344270e834414f0226e5b088f65b 482 Gene3D G3DSA:1.20.1250.20 241 463 2.0E-6 T 11-10-2018 AMC99_00750 316f344270e834414f0226e5b088f65b 482 Gene3D G3DSA:1.20.1250.20 20 216 1.8E-8 T 11-10-2018 AMC99_00750 316f344270e834414f0226e5b088f65b 482 Pfam PF13347 MFS/sugar transport protein 21 461 1.5E-67 T 11-10-2018 AMC99_00368 ffdd80e668dc712f5e9353e7db4ff59e 202 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 82 1.0E-11 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AMC99_00368 ffdd80e668dc712f5e9353e7db4ff59e 202 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 93 191 2.1E-20 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AMC99_00368 ffdd80e668dc712f5e9353e7db4ff59e 202 Gene3D G3DSA:3.40.50.1360 88 202 2.5E-24 T 11-10-2018 AMC99_00368 ffdd80e668dc712f5e9353e7db4ff59e 202 Gene3D G3DSA:3.40.50.1360 3 87 1.7E-10 T 11-10-2018 AMC99_00368 ffdd80e668dc712f5e9353e7db4ff59e 202 SUPERFAMILY SSF100950 6 192 2.09E-36 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AMC99_02739 0469723e3fee4929ad9ddd9adae96096 209 SUPERFAMILY SSF56784 4 202 5.2E-10 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_02069 3579bac444495450b5f085cba69d0d0b 106 Pfam PF00072 Response regulator receiver domain 3 100 1.9E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02069 3579bac444495450b5f085cba69d0d0b 106 SMART SM00448 1 100 5.2E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02069 3579bac444495450b5f085cba69d0d0b 106 SUPERFAMILY SSF52172 3 102 6.4E-30 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_02069 3579bac444495450b5f085cba69d0d0b 106 Gene3D G3DSA:3.40.50.12740 1 104 5.3E-31 T 11-10-2018 AMC99_01122 e8144947a9149b31a2f425ae646662d0 230 Gene3D G3DSA:3.40.50.1820 1 230 2.3E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01122 e8144947a9149b31a2f425ae646662d0 230 SUPERFAMILY SSF53474 4 229 1.51E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01122 e8144947a9149b31a2f425ae646662d0 230 Pfam PF01738 Dienelactone hydrolase family 16 227 5.6E-32 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AMC99_01793 a3415584729929c303372217f3f0203e 327 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AMC99_01793 a3415584729929c303372217f3f0203e 327 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 9.3E-18 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMC99_01793 a3415584729929c303372217f3f0203e 327 PRINTS PR00139 Asparaginase/glutaminase family signature 84 102 9.3E-18 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMC99_01793 a3415584729929c303372217f3f0203e 327 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 9.3E-18 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMC99_01793 a3415584729929c303372217f3f0203e 327 PIRSF PIRSF001220 1 327 1.1E-76 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMC99_01793 a3415584729929c303372217f3f0203e 327 SUPERFAMILY SSF53774 4 325 8.77E-86 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 AMC99_01793 a3415584729929c303372217f3f0203e 327 Pfam PF00710 Asparaginase, N-terminal 5 193 3.6E-45 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 AMC99_01793 a3415584729929c303372217f3f0203e 327 PIRSF PIRSF500176 1 327 1.4E-71 T 11-10-2018 AMC99_01793 a3415584729929c303372217f3f0203e 327 SMART SM00870 4 320 8.6E-100 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 AMC99_01793 a3415584729929c303372217f3f0203e 327 Gene3D G3DSA:3.40.50.1170 1 206 4.2E-61 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 AMC99_01793 a3415584729929c303372217f3f0203e 327 Gene3D G3DSA:3.40.50.40 213 326 1.3E-35 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 AMC99_01815 8c814432b3a98c0b85d474b6f681514e 126 SUPERFAMILY SSF46785 1 112 3.36E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01815 8c814432b3a98c0b85d474b6f681514e 126 Gene3D G3DSA:1.10.10.10 1 82 7.2E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01815 8c814432b3a98c0b85d474b6f681514e 126 Pfam PF03551 Transcriptional regulator PadR-like family 1 56 1.3E-11 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal AMC99_01761 ba995b20597ec325d38f8c32abb04607 202 Pfam PF00293 NUDIX domain 38 151 4.6E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_01761 ba995b20597ec325d38f8c32abb04607 202 SUPERFAMILY SSF55811 33 189 1.76E-38 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMC99_01761 ba995b20597ec325d38f8c32abb04607 202 Gene3D G3DSA:3.90.79.10 16 192 2.3E-51 T 11-10-2018 AMC99_00741 e585015c9acefcba538be9b633da496f 227 Gene3D G3DSA:3.40.50.150 41 226 5.0E-23 T 11-10-2018 AMC99_00741 e585015c9acefcba538be9b633da496f 227 SUPERFAMILY SSF53335 45 209 1.94E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00450 16a9bb4d978a9aa569624604facf3998 230 SUPERFAMILY SSF56300 25 179 3.23E-15 T 11-10-2018 AMC99_00450 16a9bb4d978a9aa569624604facf3998 230 Pfam PF00149 Calcineurin-like phosphoesterase 25 118 4.5E-5 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AMC99_00450 16a9bb4d978a9aa569624604facf3998 230 PIRSF PIRSF000887 4 227 6.9E-45 T 11-10-2018 IPR024173 Phosphoesterase, MJ0037 AMC99_00450 16a9bb4d978a9aa569624604facf3998 230 Gene3D G3DSA:3.60.21.10 25 175 5.7E-10 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AMC99_00450 16a9bb4d978a9aa569624604facf3998 230 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 5 201 9.9E-62 T 11-10-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated AMC99_00117 8c3956c0b13a360ea842fb4f8f51c9ab 245 Pfam PF04055 Radical SAM superfamily 41 181 2.5E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AMC99_00117 8c3956c0b13a360ea842fb4f8f51c9ab 245 Pfam PF13353 4Fe-4S single cluster domain 34 109 1.8E-6 T 11-10-2018 AMC99_00117 8c3956c0b13a360ea842fb4f8f51c9ab 245 Gene3D G3DSA:3.20.20.70 20 208 5.3E-29 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_00117 8c3956c0b13a360ea842fb4f8f51c9ab 245 SUPERFAMILY SSF102114 32 229 4.19E-23 T 11-10-2018 AMC99_00117 8c3956c0b13a360ea842fb4f8f51c9ab 245 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 23 210 9.6E-58 T 11-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein AMC99_02795 2e341156d3af373a178c690194479732 469 TIGRFAM TIGR00797 matE: MATE efflux family protein 31 438 3.3E-65 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_02795 2e341156d3af373a178c690194479732 469 PIRSF PIRSF006603 20 463 1.8E-52 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_02795 2e341156d3af373a178c690194479732 469 Pfam PF01554 MatE 31 191 2.4E-22 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_02795 2e341156d3af373a178c690194479732 469 Pfam PF01554 MatE 259 417 4.9E-26 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 AMC99_02201 fe4f0b0d612b6a3cb42721fc697e9616 132 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 26 130 1.1E-23 T 11-10-2018 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 Reactome: R-HSA-6799198 AMC99_02669 315c44f3bc34e5bab24e0f14945c164c 194 Pfam PF00691 OmpA family 64 152 1.0E-15 T 11-10-2018 IPR006665 OmpA-like domain AMC99_02669 315c44f3bc34e5bab24e0f14945c164c 194 Gene3D G3DSA:3.30.1330.60 39 171 4.9E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_02669 315c44f3bc34e5bab24e0f14945c164c 194 SUPERFAMILY SSF103088 55 170 1.18E-24 T 11-10-2018 IPR036737 OmpA-like domain superfamily AMC99_02589 8e7869f972cd36ee4a80f8c27956229e 140 SUPERFAMILY SSF81301 29 131 3.92E-35 T 11-10-2018 AMC99_02589 8e7869f972cd36ee4a80f8c27956229e 140 Pfam PF02410 Ribosomal silencing factor during starvation 34 128 1.1E-25 T 11-10-2018 AMC99_02589 8e7869f972cd36ee4a80f8c27956229e 140 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 31 128 2.8E-34 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMC99_02589 8e7869f972cd36ee4a80f8c27956229e 140 Gene3D G3DSA:3.30.460.10 25 138 5.5E-38 T 11-10-2018 AMC99_02589 8e7869f972cd36ee4a80f8c27956229e 140 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 23 129 23.96 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMC99_00155 8f1442b900860aab27947aaaca8ae8f0 155 SUPERFAMILY SSF52833 17 154 1.34E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00155 8f1442b900860aab27947aaaca8ae8f0 155 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 154 5.1E-27 T 11-10-2018 AMC99_00155 8f1442b900860aab27947aaaca8ae8f0 155 Gene3D G3DSA:3.40.30.10 82 154 2.1E-10 T 11-10-2018 AMC99_00155 8f1442b900860aab27947aaaca8ae8f0 155 Gene3D G3DSA:1.10.10.1590 15 81 3.9E-12 T 11-10-2018 AMC99_02251 b9e7aa28ea280f739fea965e8eebad48 231 SUPERFAMILY SSF69593 9 224 1.31E-24 T 11-10-2018 AMC99_02251 b9e7aa28ea280f739fea965e8eebad48 231 SMART SM00563 69 183 8.1E-18 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMC99_02251 b9e7aa28ea280f739fea965e8eebad48 231 Pfam PF01553 Acyltransferase 59 180 7.3E-13 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMC99_02593 12bd9ef2449691f15b438ca30422c0f4 157 Gene3D G3DSA:1.20.1550.10 5 156 1.1E-13 T 11-10-2018 IPR023380 DsbB-like superfamily AMC99_02593 12bd9ef2449691f15b438ca30422c0f4 157 SUPERFAMILY SSF158442 13 150 1.7E-31 T 11-10-2018 IPR023380 DsbB-like superfamily AMC99_02593 12bd9ef2449691f15b438ca30422c0f4 157 PIRSF PIRSF033913 4 157 1.8E-21 T 11-10-2018 IPR024199 Uncharacterised conserved protein, DsbB-like AMC99_02593 12bd9ef2449691f15b438ca30422c0f4 157 Pfam PF02600 Disulfide bond formation protein DsbB 13 149 1.0E-28 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AMC99_01990 ee609acdbecb456e0a3675def7bb04ec 92 Pfam PF14464 Prokaryotic homologs of the JAB domain 8 75 1.6E-14 T 11-10-2018 IPR028090 JAB domain, prokaryotic AMC99_01990 ee609acdbecb456e0a3675def7bb04ec 92 SUPERFAMILY SSF102712 11 69 3.79E-15 T 11-10-2018 AMC99_01990 ee609acdbecb456e0a3675def7bb04ec 92 Gene3D G3DSA:3.40.140.10 1 88 1.1E-16 T 11-10-2018 AMC99_02659 7119031388567cfb089790b2876c3dc7 335 Gene3D G3DSA:3.40.640.10 16 252 1.1E-100 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AMC99_02659 7119031388567cfb089790b2876c3dc7 335 Gene3D G3DSA:3.90.1150.10 9 325 1.1E-100 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AMC99_02659 7119031388567cfb089790b2876c3dc7 335 SUPERFAMILY SSF53383 6 331 3.52E-83 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AMC99_02659 7119031388567cfb089790b2876c3dc7 335 Pfam PF01212 Beta-eliminating lyase 7 289 7.4E-50 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 AMC99_01055 7105207d11917c3474fb364cc25bb3ca 133 Pfam PF09945 Predicted membrane protein (DUF2177) 3 124 1.4E-39 T 11-10-2018 IPR018687 Protein of unknown function DUF2177, membrane AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 247 262 5.8E-51 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 150 174 5.8E-51 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 117 137 5.8E-51 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 52 71 5.8E-51 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 72 91 5.8E-51 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 195 206 5.8E-51 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 PRINTS PR00603 Cytochrome C1 signature 228 247 5.8E-51 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 SUPERFAMILY SSF46626 44 246 5.17E-58 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 Pfam PF02167 Cytochrome C1 family 54 280 1.8E-89 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AMC99_02666 169e569dbc464659260d10a0aebfdea4 286 Gene3D G3DSA:1.10.760.10 43 247 1.6E-77 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_02217 02f8361a110148f5ad506ade9da0914f 246 Pfam PF02592 Putative vitamin uptake transporter 72 233 3.6E-35 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AMC99_02217 02f8361a110148f5ad506ade9da0914f 246 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 43 235 1.0E-22 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AMC99_02217 02f8361a110148f5ad506ade9da0914f 246 Hamap MF_02088 Probable queuosine precursor transporter. 33 243 13.155 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AMC99_01665 d3b29d3a3c4667cb3b9dd31a03a76a99 85 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 1 85 11.041 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01665 d3b29d3a3c4667cb3b9dd31a03a76a99 85 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 3 82 1.8E-25 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01665 d3b29d3a3c4667cb3b9dd31a03a76a99 85 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 8 81 4.0E-28 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01665 d3b29d3a3c4667cb3b9dd31a03a76a99 85 SUPERFAMILY SSF51344 1 84 3.4E-22 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01665 d3b29d3a3c4667cb3b9dd31a03a76a99 85 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 83 9.3E-23 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01665 d3b29d3a3c4667cb3b9dd31a03a76a99 85 Gene3D G3DSA:2.60.15.10 1 82 5.1E-27 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AMC99_01479 9a7a8b5306d74cc3215043088124df34 128 Pfam PF05433 Glycine zipper 2TM domain 81 120 1.3E-9 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AMC99_02012 2c3aa5d24a60a0bd96500765a9ecb551 204 SUPERFAMILY SSF52540 2 173 3.76E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02012 2c3aa5d24a60a0bd96500765a9ecb551 204 PIRSF PIRSF009320 1 177 4.3E-34 T 11-10-2018 AMC99_02012 2c3aa5d24a60a0bd96500765a9ecb551 204 Gene3D G3DSA:3.40.50.300 1 168 4.3E-27 T 11-10-2018 AMC99_02162 fa72a99fed5eea6008bb835843e81608 955 SUPERFAMILY SSF53335 164 596 2.47E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02162 fa72a99fed5eea6008bb835843e81608 955 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 482 494 8.7E-5 T 11-10-2018 AMC99_02162 fa72a99fed5eea6008bb835843e81608 955 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 371 385 8.7E-5 T 11-10-2018 AMC99_01240 ee9e7f7186e2a9cd4fdee3fbdf3e76cb 91 Gene3D G3DSA:1.20.120.160 1 87 7.5E-6 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMC99_01240 ee9e7f7186e2a9cd4fdee3fbdf3e76cb 91 SUPERFAMILY SSF47226 6 85 8.24E-8 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 AMC99_01052 573ce9ea00dca21cafdbe729ab271caa 263 Pfam PF05019 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 38 231 3.1E-7 T 11-10-2018 IPR007715 Ubiquinone biosynthesis protein Coq4 GO:0006744 AMC99_00731 059bb777f7d4c5ba1e7ea2aef81e77e1 374 Pfam PF12006 Protein of unknown function (DUF3500) 34 360 9.3E-75 T 11-10-2018 IPR021889 Protein of unknown function DUF3500 AMC99_02680 be80eb13dd13e22c10a0c8f10450ebec 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 133 2.4E-19 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMC99_00490 091d2815a192fd27108b453a5c44b271 341 SUPERFAMILY SSF53613 9 332 2.34E-60 T 11-10-2018 IPR029056 Ribokinase-like AMC99_00490 091d2815a192fd27108b453a5c44b271 341 Pfam PF00294 pfkB family carbohydrate kinase 10 314 8.9E-30 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB AMC99_00490 091d2815a192fd27108b453a5c44b271 341 Gene3D G3DSA:3.40.1190.20 8 339 3.9E-95 T 11-10-2018 IPR029056 Ribokinase-like AMC99_00035 cb336f0719bccd21d825e3c1fd394151 345 Pfam PF02481 DNA recombination-mediator protein A 105 288 7.1E-54 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AMC99_00035 cb336f0719bccd21d825e3c1fd394151 345 Gene3D G3DSA:3.40.50.450 17 292 1.2E-60 T 11-10-2018 AMC99_00035 cb336f0719bccd21d825e3c1fd394151 345 SUPERFAMILY SSF102405 114 292 2.98E-23 T 11-10-2018 AMC99_00131 5289ebc0ab1475006bce3645fc83f5e4 238 Pfam PF02613 Nitrate reductase delta subunit 33 156 1.8E-11 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone AMC99_00131 5289ebc0ab1475006bce3645fc83f5e4 238 SUPERFAMILY SSF89155 3 163 1.11E-28 T 11-10-2018 IPR036411 TorD-like superfamily AMC99_00131 5289ebc0ab1475006bce3645fc83f5e4 238 Gene3D G3DSA:1.10.3480.10 3 150 1.0E-9 T 11-10-2018 AMC99_00131 5289ebc0ab1475006bce3645fc83f5e4 238 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 5.3E-32 T 11-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 AMC99_02479 c33c3e60164310e04077041f65bea4a1 330 PIRSF PIRSF031900 6 319 3.4E-23 T 11-10-2018 IPR014567 Uncharacterised conserved protein UCP031900 AMC99_02479 c33c3e60164310e04077041f65bea4a1 330 Pfam PF13449 Esterase-like activity of phytase 64 303 8.0E-24 T 11-10-2018 IPR027372 Phytase-like domain AMC99_01949 12f8d2e491e7a94223a98602771708f0 149 Gene3D G3DSA:2.40.128.270 29 144 9.3E-6 T 11-10-2018 IPR038670 HslJ-like superfamily AMC99_01949 12f8d2e491e7a94223a98602771708f0 149 Pfam PF03724 META domain 32 138 4.5E-11 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ AMC99_02100 0f1e58e12f391e0d0001f5e2270729cb 323 SUPERFAMILY SSF48452 14 77 2.95E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02100 0f1e58e12f391e0d0001f5e2270729cb 323 Pfam PF14559 Tetratricopeptide repeat 24 76 3.3E-6 T 11-10-2018 AMC99_02100 0f1e58e12f391e0d0001f5e2270729cb 323 Gene3D G3DSA:1.25.40.10 6 101 3.9E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02100 0f1e58e12f391e0d0001f5e2270729cb 323 TIGRFAM TIGR04390 OMP_YaiO_dom: outer membrane protein, YaiO family 106 282 4.0E-22 T 11-10-2018 IPR030887 YaiO family, OMP domain AMC99_01747 b941cd877bd8e1791077c81c4229ca63 94 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 90 1.1E-35 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 AMC99_01728 f02ef05e338c7e0ca1fb02c77078a54e 292 SUPERFAMILY SSF103481 33 134 2.48E-13 T 11-10-2018 AMC99_01728 f02ef05e338c7e0ca1fb02c77078a54e 292 Pfam PF00892 EamA-like transporter family 2 131 7.4E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_01728 f02ef05e338c7e0ca1fb02c77078a54e 292 Pfam PF00892 EamA-like transporter family 140 274 2.0E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 AMC99_01728 f02ef05e338c7e0ca1fb02c77078a54e 292 SUPERFAMILY SSF103481 178 284 1.83E-9 T 11-10-2018 AMC99_02741 1da106fd5fcfcdb61d89f040eead6451 242 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 17 222 7.9E-21 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 AMC99_02741 1da106fd5fcfcdb61d89f040eead6451 242 SUPERFAMILY SSF51695 15 223 1.99E-43 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMC99_02741 1da106fd5fcfcdb61d89f040eead6451 242 Gene3D G3DSA:3.20.20.190 14 239 7.5E-39 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 AMC99_00518 79b22b0919bca41d6044708353af01c4 324 Pfam PF10150 Ribonuclease E/G family 143 240 1.7E-7 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AMC99_00342 280b6afb985ea847d3e3c1d519063097 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 263 9.4E-76 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 AMC99_00342 280b6afb985ea847d3e3c1d519063097 264 SUPERFAMILY SSF52096 1 264 3.65E-88 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_00342 280b6afb985ea847d3e3c1d519063097 264 Gene3D G3DSA:1.10.12.10 207 263 2.4E-19 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal AMC99_00342 280b6afb985ea847d3e3c1d519063097 264 Gene3D G3DSA:3.90.226.10 1 206 4.7E-72 T 11-10-2018 AMC99_00342 280b6afb985ea847d3e3c1d519063097 264 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 AMC99_00481 699c5cb7e3d78b04057fbd53685b1f4b 436 Gene3D G3DSA:1.20.1250.20 38 229 2.0E-7 T 11-10-2018 AMC99_00481 699c5cb7e3d78b04057fbd53685b1f4b 436 Pfam PF07690 Major Facilitator Superfamily 272 435 2.3E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_00481 699c5cb7e3d78b04057fbd53685b1f4b 436 SUPERFAMILY SSF103473 48 433 2.22E-31 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00481 699c5cb7e3d78b04057fbd53685b1f4b 436 Gene3D G3DSA:1.20.1250.20 254 436 1.1E-16 T 11-10-2018 AMC99_01673 122854d7d0199c651eb7fc1932db5400 239 Gene3D G3DSA:1.10.150.240 33 102 2.9E-45 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMC99_01673 122854d7d0199c651eb7fc1932db5400 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 23 207 2.1E-26 T 11-10-2018 AMC99_01673 122854d7d0199c651eb7fc1932db5400 239 Gene3D G3DSA:3.40.50.1000 21 228 2.9E-45 T 11-10-2018 IPR023214 HAD superfamily AMC99_01673 122854d7d0199c651eb7fc1932db5400 239 SUPERFAMILY SSF56784 17 238 1.03E-48 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_01673 122854d7d0199c651eb7fc1932db5400 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 118 201 1.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AMC99_02289 44d3247e1b77998b625a53ccaabfa467 298 Gene3D G3DSA:3.40.50.1820 3 294 2.8E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02289 44d3247e1b77998b625a53ccaabfa467 298 SUPERFAMILY SSF53474 1 289 2.72E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02289 44d3247e1b77998b625a53ccaabfa467 298 Pfam PF00561 alpha/beta hydrolase fold 22 275 7.6E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AMC99_01652 8bc181452297df3359db91f5145fa1a3 121 SUPERFAMILY SSF46785 9 113 1.67E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01652 8bc181452297df3359db91f5145fa1a3 121 Pfam PF01638 HxlR-like helix-turn-helix 19 104 3.6E-29 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type AMC99_01652 8bc181452297df3359db91f5145fa1a3 121 Gene3D G3DSA:1.10.10.10 4 118 2.5E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02515 0a11602ba66e477d1af43e2b47998be5 68 Gene3D G3DSA:1.20.120.520 2 67 6.5E-7 T 11-10-2018 AMC99_02515 0a11602ba66e477d1af43e2b47998be5 68 Pfam PF01814 Hemerythrin HHE cation binding domain 4 64 1.3E-8 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 AMC99_00140 c56d9ca077c2c7f7d6a2fb34123473e4 192 Gene3D G3DSA:3.90.550.10 1 189 1.2E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00140 c56d9ca077c2c7f7d6a2fb34123473e4 192 SUPERFAMILY SSF53448 1 178 4.77E-18 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00140 c56d9ca077c2c7f7d6a2fb34123473e4 192 Pfam PF12804 MobA-like NTP transferase domain 1 150 4.0E-19 T 11-10-2018 IPR025877 MobA-like NTP transferase AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 SUPERFAMILY SSF52096 23 279 1.39E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 Gene3D G3DSA:3.90.226.10 23 281 1.3E-73 T 11-10-2018 AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 226 237 8.1E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 126 140 8.1E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 160 178 8.1E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 197 214 8.1E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 248 257 8.1E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 2 279 2.1E-105 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 278 36.004 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 AMC99_01444 332a17e28b73c6872996f6adbab0e44c 282 Pfam PF01039 Carboxyl transferase domain 94 260 1.6E-16 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AMC99_01028 d2a0df3b0f6f550f32c580594f870e26 446 SUPERFAMILY SSF56935 89 446 4.03E-13 T 11-10-2018 AMC99_01028 d2a0df3b0f6f550f32c580594f870e26 446 Gene3D G3DSA:2.40.160.10 67 446 2.4E-79 T 11-10-2018 IPR023614 Porin domain superfamily AMC99_01028 d2a0df3b0f6f550f32c580594f870e26 446 Pfam PF07396 Phosphate-selective porin O and P 96 446 4.0E-60 T 11-10-2018 IPR010870 Phosphate-selective porin O/P AMC99_01607 5ecc1a5added15f75ce9a210d6916e9a 139 Gene3D G3DSA:1.10.10.1550 53 108 2.9E-29 T 11-10-2018 AMC99_01607 5ecc1a5added15f75ce9a210d6916e9a 139 Pfam PF05443 ROS/MUCR transcriptional regulator protein 5 125 4.8E-49 T 11-10-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 AMC99_00067 8e3699400e4ca7bf769d48f0fa6485b6 577 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 281 527 1.8E-85 T 11-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN AMC99_00366 0e29c4b58e17705d3f6fac6fb436be03 186 SUPERFAMILY SSF103473 6 181 8.11E-5 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_01801 73aac36dabc3e19bf8ee52e44874874d 322 SUPERFAMILY SSF46785 201 313 2.54E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01801 73aac36dabc3e19bf8ee52e44874874d 322 Gene3D G3DSA:1.10.10.10 189 319 2.3E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01801 73aac36dabc3e19bf8ee52e44874874d 322 SUPERFAMILY SSF52172 19 131 2.09E-6 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01592 ccda9d8b2f1141ef991d2d89df7f42a7 209 SUPERFAMILY SSF52833 6 93 1.8E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_01592 ccda9d8b2f1141ef991d2d89df7f42a7 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 78 3.4E-15 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AMC99_01592 ccda9d8b2f1141ef991d2d89df7f42a7 209 SUPERFAMILY SSF47616 89 195 5.99E-16 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMC99_01592 ccda9d8b2f1141ef991d2d89df7f42a7 209 Gene3D G3DSA:3.40.30.10 2 76 4.7E-16 T 11-10-2018 AMC99_01592 ccda9d8b2f1141ef991d2d89df7f42a7 209 Gene3D G3DSA:1.20.1050.10 93 201 4.2E-8 T 11-10-2018 AMC99_01592 ccda9d8b2f1141ef991d2d89df7f42a7 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 118 180 3.3E-6 T 11-10-2018 AMC99_01270 1542387b46437e07fd5505b1a9ff5267 76 SUPERFAMILY SSF55331 7 70 1.4E-13 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AMC99_01270 1542387b46437e07fd5505b1a9ff5267 76 Pfam PF01361 Tautomerase enzyme 7 67 2.7E-14 T 11-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 AMC99_01270 1542387b46437e07fd5505b1a9ff5267 76 Gene3D G3DSA:3.30.429.10 7 67 1.3E-16 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily AMC99_00907 78da79c9eb97a3cd61eb80397b4e3ba0 418 Pfam PF13194 Domain of unknown function (DUF4010) 182 387 2.7E-43 T 11-10-2018 IPR025105 Domain of unknown function DUF4010 AMC99_00907 78da79c9eb97a3cd61eb80397b4e3ba0 418 Pfam PF02308 MgtC family 9 134 1.4E-16 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMC99_01713 ba9dbe4712b49d754cbd1e53b61b9cec 247 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 25 224 8.9E-37 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AMC99_01713 ba9dbe4712b49d754cbd1e53b61b9cec 247 Hamap MF_02088 Probable queuosine precursor transporter. 14 230 17.836 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AMC99_01713 ba9dbe4712b49d754cbd1e53b61b9cec 247 Pfam PF02592 Putative vitamin uptake transporter 57 218 2.8E-53 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 AMC99_02189 addc05df0eb2a651fcea658e26174cdc 270 SUPERFAMILY SSF52540 1 225 8.86E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_02189 addc05df0eb2a651fcea658e26174cdc 270 Gene3D G3DSA:3.40.50.300 1 266 7.0E-11 T 11-10-2018 AMC99_00772 90393725ae3e92e6bfdf3388d7ec716d 109 SMART SM00418 17 95 3.2E-25 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00772 90393725ae3e92e6bfdf3388d7ec716d 109 SUPERFAMILY SSF46785 10 98 8.17E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_00772 90393725ae3e92e6bfdf3388d7ec716d 109 Gene3D G3DSA:1.10.10.10 5 103 1.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_00772 90393725ae3e92e6bfdf3388d7ec716d 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 1.4E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00772 90393725ae3e92e6bfdf3388d7ec716d 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 1.4E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00772 90393725ae3e92e6bfdf3388d7ec716d 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 1.4E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00772 90393725ae3e92e6bfdf3388d7ec716d 109 Pfam PF01022 Bacterial regulatory protein, arsR family 25 69 3.3E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMC99_00258 1bd3dbb8c04a3bff8c1f9465b235dca2 175 Pfam PF10067 Predicted membrane protein (DUF2306) 56 150 2.9E-8 T 11-10-2018 IPR018750 Protein of unknown function DUF2306, membrane AMC99_02612 85d543d516bd774e3ce53f4f2cb62830 418 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 323 405 4.8E-13 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain AMC99_02612 85d543d516bd774e3ce53f4f2cb62830 418 Pfam PF01943 Polysaccharide biosynthesis protein 6 271 1.7E-18 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AMC99_00783 09b097c7abe284a5246a9aead5743001 353 SUPERFAMILY SSF55681 5 250 2.13E-58 T 11-10-2018 AMC99_00783 09b097c7abe284a5246a9aead5743001 353 Gene3D G3DSA:3.30.390.50 261 346 4.3E-14 T 11-10-2018 AMC99_00783 09b097c7abe284a5246a9aead5743001 353 Gene3D G3DSA:3.30.930.10 4 253 6.8E-52 T 11-10-2018 AMC99_01247 1815db827f3d71bbe9a1082293d51745 516 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 66 121 4.0E-7 T 11-10-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01247 1815db827f3d71bbe9a1082293d51745 516 Pfam PF00361 Proton-conducting membrane transporter 126 412 3.8E-86 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01247 1815db827f3d71bbe9a1082293d51745 516 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 477 3.3E-183 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01247 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 231 255 3.2E-49 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01247 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 319 338 3.2E-49 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01247 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 3.2E-49 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01247 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 371 397 3.2E-49 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01247 1815db827f3d71bbe9a1082293d51745 516 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 3.2E-49 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_02285 99739a88800c6e50497b837118516f42 127 Pfam PF07238 PilZ domain 15 91 5.6E-6 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMC99_02285 99739a88800c6e50497b837118516f42 127 SUPERFAMILY SSF141371 8 92 4.51E-7 T 11-10-2018 AMC99_00246 8819dab1e30dca8e2338a13044e1e39e 148 TIGRFAM TIGR00576 dut: dUTP diphosphatase 7 143 9.1E-55 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AMC99_00246 8819dab1e30dca8e2338a13044e1e39e 148 Gene3D G3DSA:2.70.40.10 2 143 5.4E-56 T 11-10-2018 IPR036157 dUTPase-like superfamily AMC99_00246 8819dab1e30dca8e2338a13044e1e39e 148 SUPERFAMILY SSF51283 3 143 2.09E-53 T 11-10-2018 IPR036157 dUTPase-like superfamily AMC99_00246 8819dab1e30dca8e2338a13044e1e39e 148 Pfam PF00692 dUTPase 15 143 2.9E-36 T 11-10-2018 IPR029054 dUTPase-like AMC99_00246 8819dab1e30dca8e2338a13044e1e39e 148 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 144 34.029 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AMC99_02049 0fdd3ec1816dabe02f262a9c68ccd5cf 232 Pfam PF14014 Protein of unknown function (DUF4230) 66 216 1.2E-15 T 11-10-2018 IPR025324 Protein of unknown function DUF4230 AMC99_00915 212ddcc11444e2768da969f5448daefa 470 Gene3D G3DSA:3.40.50.300 215 395 7.4E-53 T 11-10-2018 AMC99_00915 212ddcc11444e2768da969f5448daefa 470 Gene3D G3DSA:3.40.50.300 2 212 2.8E-75 T 11-10-2018 AMC99_00915 212ddcc11444e2768da969f5448daefa 470 SMART SM00487 22 224 1.8E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMC99_00915 212ddcc11444e2768da969f5448daefa 470 Pfam PF00271 Helicase conserved C-terminal domain 249 346 1.1E-28 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_00915 212ddcc11444e2768da969f5448daefa 470 Pfam PF00270 DEAD/DEAH box helicase 27 198 1.4E-48 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMC99_00915 212ddcc11444e2768da969f5448daefa 470 SUPERFAMILY SSF52540 76 366 1.89E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00915 212ddcc11444e2768da969f5448daefa 470 SMART SM00490 265 346 1.9E-33 T 11-10-2018 IPR001650 Helicase, C-terminal AMC99_01157 67f964026e0473cc1d1d2829169887cb 158 Gene3D G3DSA:2.60.40.1890 44 157 9.1E-21 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AMC99_01157 67f964026e0473cc1d1d2829169887cb 158 SUPERFAMILY SSF110087 16 156 1.57E-27 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily AMC99_01157 67f964026e0473cc1d1d2829169887cb 158 Pfam PF04314 Copper chaperone PCu(A)C 49 146 2.2E-18 T 11-10-2018 IPR007410 Copper chaperone PCuAC AMC99_01132 20523c7968ec855e044ffe1d61c395bf 393 Pfam PF05762 VWA domain containing CoxE-like protein 185 271 3.2E-9 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like AMC99_00305 3c3e838022295999ee813b85603a0f80 420 Pfam PF00375 Sodium:dicarboxylate symporter family 19 413 5.2E-61 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AMC99_00305 3c3e838022295999ee813b85603a0f80 420 SUPERFAMILY SSF118215 19 413 4.18E-60 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMC99_00305 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.6E-22 T 11-10-2018 AMC99_00305 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 204 223 1.6E-22 T 11-10-2018 AMC99_00305 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 1.6E-22 T 11-10-2018 AMC99_00305 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 1.6E-22 T 11-10-2018 AMC99_00305 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 58 78 1.6E-22 T 11-10-2018 AMC99_00305 3c3e838022295999ee813b85603a0f80 420 PRINTS PR00173 Glutamate-aspartate symporter signature 368 388 1.6E-22 T 11-10-2018 AMC99_00305 3c3e838022295999ee813b85603a0f80 420 Gene3D G3DSA:1.10.3860.10 11 417 2.2E-71 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AMC99_02099 98a5724704e0157a0a689692392b9dcb 122 SMART SM00448 2 115 8.0E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02099 98a5724704e0157a0a689692392b9dcb 122 Gene3D G3DSA:3.40.50.12740 2 122 4.3E-44 T 11-10-2018 AMC99_02099 98a5724704e0157a0a689692392b9dcb 122 Pfam PF00072 Response regulator receiver domain 4 115 3.6E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_02099 98a5724704e0157a0a689692392b9dcb 122 SUPERFAMILY SSF52172 1 121 6.55E-42 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_00080 2f3710ddbd58a6c7ef884922c2865511 95 Pfam PF07178 TraL protein 5 93 8.9E-30 T 11-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AMC99_00080 2f3710ddbd58a6c7ef884922c2865511 95 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 92 3.6E-26 T 11-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 AMC99_01609 9a8a01da53c940b8b976919a2d8ebb7b 306 Pfam PF01553 Acyltransferase 98 211 1.6E-18 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMC99_01609 9a8a01da53c940b8b976919a2d8ebb7b 306 SMART SM00563 100 214 7.0E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AMC99_01609 9a8a01da53c940b8b976919a2d8ebb7b 306 SUPERFAMILY SSF69593 43 261 1.02E-27 T 11-10-2018 AMC99_00004 725408cae859f08eed524e7608418723 195 Pfam PF04973 Nicotinamide mononucleotide transporter 5 184 5.2E-48 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMC99_00004 725408cae859f08eed524e7608418723 195 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 5 187 1.5E-27 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 AMC99_01249 821c1cfd0cb36d9ff810e53db10076eb 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 6.7E-23 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AMC99_01249 821c1cfd0cb36d9ff810e53db10076eb 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.628 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AMC99_02637 30825054df2a7f2b6cccf3fd5e35c0a6 250 SUPERFAMILY SSF52402 1 243 2.37E-86 T 11-10-2018 AMC99_02637 30825054df2a7f2b6cccf3fd5e35c0a6 250 PIRSF PIRSF000090 1 250 5.2E-86 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AMC99_02637 30825054df2a7f2b6cccf3fd5e35c0a6 250 Gene3D G3DSA:3.40.50.620 1 249 1.0E-87 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMC99_02637 30825054df2a7f2b6cccf3fd5e35c0a6 250 Pfam PF01012 Electron transfer flavoprotein domain 29 206 2.1E-48 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMC99_02637 30825054df2a7f2b6cccf3fd5e35c0a6 250 SMART SM00893 23 213 1.3E-65 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 AMC99_02637 30825054df2a7f2b6cccf3fd5e35c0a6 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 157 177 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 AMC99_00034 c7bfd5899da605b30935af7de2806aa1 415 SUPERFAMILY SSF53271 299 348 3.28E-8 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMC99_00034 c7bfd5899da605b30935af7de2806aa1 415 Gene3D G3DSA:3.40.50.1000 5 150 1.2E-8 T 11-10-2018 IPR023214 HAD superfamily AMC99_00034 c7bfd5899da605b30935af7de2806aa1 415 Gene3D G3DSA:3.40.50.2020 163 359 1.1E-7 T 11-10-2018 AMC99_00034 c7bfd5899da605b30935af7de2806aa1 415 SUPERFAMILY SSF56784 6 131 1.82E-11 T 11-10-2018 IPR036412 HAD-like superfamily AMC99_01913 97597d710a842fab074f910a941eac0a 339 Gene3D G3DSA:3.20.20.300 1 335 2.0E-88 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 AMC99_01913 97597d710a842fab074f910a941eac0a 339 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 25 298 1.4E-52 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 AMC99_01913 97597d710a842fab074f910a941eac0a 339 SUPERFAMILY SSF51445 3 284 1.9E-63 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AMC99_01913 97597d710a842fab074f910a941eac0a 339 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 237 254 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 AMC99_02678 aa5577a6d5eeee4a0ba3447de7adf801 138 Pfam PF02472 Biopolymer transport protein ExbD/TolR 1 104 1.5E-6 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMC99_00492 e1947ae6f5213167bd11bbfbebfac126 147 SUPERFAMILY SSF51182 22 144 1.48E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily AMC99_00492 e1947ae6f5213167bd11bbfbebfac126 147 Gene3D G3DSA:2.60.120.10 26 145 5.2E-15 T 11-10-2018 IPR014710 RmlC-like jelly roll fold AMC99_00492 e1947ae6f5213167bd11bbfbebfac126 147 Pfam PF07883 Cupin domain 78 141 1.1E-7 T 11-10-2018 IPR013096 Cupin 2, conserved barrel AMC99_02781 6cb7c546bce340ffc2392c84eb6f732b 222 SUPERFAMILY SSF47240 34 189 3.25E-8 T 11-10-2018 IPR009078 Ferritin-like superfamily AMC99_00415 d890e0b7ed351438d1f13870441e0934 60 Pfam PF11450 Protein of unknwon function (DUF3008) 3 58 4.1E-30 T 11-10-2018 IPR021553 Protein of unknwon function DUF3008 AMC99_00794 473c08a77e2ede6fbeaa644765c5d959 180 Gene3D G3DSA:1.20.1260.10 35 171 4.0E-6 T 11-10-2018 IPR012347 Ferritin-like AMC99_00794 473c08a77e2ede6fbeaa644765c5d959 180 SUPERFAMILY SSF47240 38 161 1.17E-12 T 11-10-2018 IPR009078 Ferritin-like superfamily AMC99_00467 42c06ba9d694cd38b79517e053a8d2ff 265 Pfam PF13622 Thioesterase-like superfamily 2 249 4.4E-52 T 11-10-2018 AMC99_00467 42c06ba9d694cd38b79517e053a8d2ff 265 SUPERFAMILY SSF54637 2 79 3.17E-24 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00467 42c06ba9d694cd38b79517e053a8d2ff 265 SUPERFAMILY SSF54637 112 252 1.04E-41 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_00467 42c06ba9d694cd38b79517e053a8d2ff 265 Gene3D G3DSA:3.10.129.10 101 252 5.9E-48 T 11-10-2018 AMC99_00467 42c06ba9d694cd38b79517e053a8d2ff 265 Gene3D G3DSA:3.10.129.10 1 83 3.2E-29 T 11-10-2018 AMC99_00458 80ce8649070e3371c78990035ce5dacb 105 Pfam PF08922 Domain of unknown function (DUF1905) 11 102 1.5E-18 T 11-10-2018 IPR015018 Protein of unknown function DUF1905 AMC99_00458 80ce8649070e3371c78990035ce5dacb 105 SUPERFAMILY SSF141694 48 103 2.88E-9 T 11-10-2018 AMC99_00159 0ebc8a9743a9f4574fd50bad24c53bee 77 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 12 70 1.9E-17 T 11-10-2018 IPR021074 Formate dehydrogenase, delta subunit AMC99_01206 76e0d650223a98f6b7d16ce3b7766530 427 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 64 1.2E-10 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_00585 773ef37520061a2841a6afab8ee26f6b 295 Pfam PF10118 Predicted metal-dependent hydrolase 27 275 3.2E-74 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AMC99_00585 773ef37520061a2841a6afab8ee26f6b 295 PIRSF PIRSF007580 11 293 1.6E-66 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AMC99_00574 480bcd165bb0df91551e71aadd929b8c 295 SUPERFAMILY SSF53335 11 269 1.4E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_00574 480bcd165bb0df91551e71aadd929b8c 295 Gene3D G3DSA:2.60.40.1180 19 80 5.5E-98 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta AMC99_00574 480bcd165bb0df91551e71aadd929b8c 295 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 92 209 1.1E-8 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 AMC99_00574 480bcd165bb0df91551e71aadd929b8c 295 Gene3D G3DSA:3.40.50.150 81 291 5.5E-98 T 11-10-2018 AMC99_00667 276fe78f634a842acecd22f986e7bd00 338 PRINTS PR00069 Aldo-keto reductase signature 117 135 9.9E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_00667 276fe78f634a842acecd22f986e7bd00 338 PRINTS PR00069 Aldo-keto reductase signature 148 165 9.9E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMC99_00667 276fe78f634a842acecd22f986e7bd00 338 Pfam PF00248 Aldo/keto reductase family 16 329 3.5E-73 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain AMC99_00667 276fe78f634a842acecd22f986e7bd00 338 Gene3D G3DSA:3.20.20.100 1 338 7.4E-110 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMC99_00667 276fe78f634a842acecd22f986e7bd00 338 SUPERFAMILY SSF51430 1 336 4.19E-95 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily AMC99_01327 ac34eec3db330eb2e21d7af9abf57c65 413 Pfam PF12704 MacB-like periplasmic core domain 30 241 1.1E-14 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AMC99_01327 ac34eec3db330eb2e21d7af9abf57c65 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 2.5E-124 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AMC99_01327 ac34eec3db330eb2e21d7af9abf57c65 413 Pfam PF02687 FtsX-like permease family 299 406 4.6E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_01560 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 660 736 3.4E-13 T 11-10-2018 IPR010221 VCBS repeat AMC99_01560 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2787 2865 4.7E-13 T 11-10-2018 IPR010221 VCBS repeat AMC99_01560 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 382 415 0.0014 T 11-10-2018 IPR010221 VCBS repeat AMC99_01560 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2894 2990 3.6E-11 T 11-10-2018 IPR010221 VCBS repeat AMC99_01560 42afaeb38d66c52ea4c5b7467022e458 3761 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1635 1676 0.0026 T 11-10-2018 IPR010221 VCBS repeat AMC99_02416 a9b1512fbcf03e3054f76580a92b5497 283 Pfam PF14559 Tetratricopeptide repeat 165 233 1.3E-5 T 11-10-2018 AMC99_02416 a9b1512fbcf03e3054f76580a92b5497 283 SUPERFAMILY SSF48452 128 265 1.36E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_02416 a9b1512fbcf03e3054f76580a92b5497 283 Gene3D G3DSA:1.25.40.10 53 279 6.8E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_00509 a4e491588be3dc1ca73ae4432211bf73 69 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 1 69 9.5E-30 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted AMC99_00509 a4e491588be3dc1ca73ae4432211bf73 69 Pfam PF13937 Domain of unknown function (DUF4212) 1 67 1.3E-26 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted AMC99_00675 2ba3be87795b7306a315b1f123c37d2a 90 SUPERFAMILY SSF47729 1 90 9.86E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMC99_00675 2ba3be87795b7306a315b1f123c37d2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.3E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_00675 2ba3be87795b7306a315b1f123c37d2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.3E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_00675 2ba3be87795b7306a315b1f123c37d2a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.3E-16 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_00675 2ba3be87795b7306a315b1f123c37d2a 90 Gene3D G3DSA:4.10.520.10 1 90 3.7E-36 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AMC99_00675 2ba3be87795b7306a315b1f123c37d2a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AMC99_00675 2ba3be87795b7306a315b1f123c37d2a 90 SMART SM00411 1 90 1.6E-43 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_00675 2ba3be87795b7306a315b1f123c37d2a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-34 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AMC99_02434 60933ea5f2c2e898a4d85fc25bdafd48 543 Pfam PF00854 POT family 112 463 5.5E-55 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 AMC99_02434 60933ea5f2c2e898a4d85fc25bdafd48 543 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 38 508 1.3E-105 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 AMC99_02434 60933ea5f2c2e898a4d85fc25bdafd48 543 Gene3D G3DSA:1.20.1250.20 33 508 2.1E-121 T 11-10-2018 AMC99_02434 60933ea5f2c2e898a4d85fc25bdafd48 543 SUPERFAMILY SSF103473 39 508 3.01E-26 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00440 c38bc0a83853efb549c0ac14c7e6de20 259 Gene3D G3DSA:3.30.1150.10 139 256 8.4E-14 T 11-10-2018 AMC99_01781 0ab363d69269f6b76ec079250239993d 141 Gene3D G3DSA:3.40.50.510 1 139 8.2E-41 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AMC99_01781 0ab363d69269f6b76ec079250239993d 141 SUPERFAMILY SSF53062 1 130 4.06E-39 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 AMC99_01781 0ab363d69269f6b76ec079250239993d 141 Pfam PF03610 PTS system fructose IIA component 3 115 3.0E-30 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMC99_02140 783432cae6fe57e71a1524c2923f2caa 240 Gene3D G3DSA:3.30.2010.10 144 230 6.2E-9 T 11-10-2018 AMC99_02140 783432cae6fe57e71a1524c2923f2caa 240 Pfam PF01863 Protein of unknown function DUF45 36 231 5.2E-39 T 11-10-2018 IPR002725 Protein of unknown function DUF45 AMC99_01266 2ca39e2ffc6bc104d5be4bd98336f35d 156 Pfam PF06347 Bacterial SH3 domain 36 89 3.2E-16 T 11-10-2018 IPR010466 Protein of unknown function DUF1058 AMC99_01266 2ca39e2ffc6bc104d5be4bd98336f35d 156 Pfam PF06347 Bacterial SH3 domain 101 152 2.2E-13 T 11-10-2018 IPR010466 Protein of unknown function DUF1058 AMC99_01266 2ca39e2ffc6bc104d5be4bd98336f35d 156 Gene3D G3DSA:2.30.30.40 23 92 3.0E-8 T 11-10-2018 AMC99_01087 8771eaa135f1f4967aa61cdc42f0d170 191 Gene3D G3DSA:1.20.120.20 20 167 1.6E-5 T 11-10-2018 AMC99_01087 8771eaa135f1f4967aa61cdc42f0d170 191 SUPERFAMILY SSF58113 25 150 3.01E-5 T 11-10-2018 AMC99_00800 ebe6a5cb1c1a184ce5d6ad74157de7bc 509 Pfam PF00171 Aldehyde dehydrogenase family 42 503 1.0E-149 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AMC99_00800 ebe6a5cb1c1a184ce5d6ad74157de7bc 509 SUPERFAMILY SSF53720 18 505 1.06E-152 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AMC99_00800 ebe6a5cb1c1a184ce5d6ad74157de7bc 509 Gene3D G3DSA:3.40.605.10 38 501 2.9E-154 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AMC99_00800 ebe6a5cb1c1a184ce5d6ad74157de7bc 509 Gene3D G3DSA:3.40.309.10 283 473 2.9E-154 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AMC99_00092 ce71361af6310a0d6f8b0e29b1e88b9d 401 Pfam PF05275 Copper resistance protein B precursor (CopB) 199 401 4.5E-86 T 11-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 AMC99_00980 854d615bdb619b03669299719bdcf910 150 SUPERFAMILY SSF102829 3 72 4.84E-12 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily AMC99_00980 854d615bdb619b03669299719bdcf910 150 Pfam PF05164 Cell division protein ZapA 4 91 4.1E-15 T 11-10-2018 IPR007838 Cell division protein ZapA-like AMC99_02819 c4c253abe1685d4ef3aa2fada7a4e806 254 Pfam PF02517 CAAX protease self-immunity 86 241 1.2E-11 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMC99_01402 5c2c38d8232ab91b900688fdb317c59a 149 Gene3D G3DSA:3.90.1590.10 1 118 7.2E-10 T 11-10-2018 AMC99_01402 5c2c38d8232ab91b900688fdb317c59a 149 SUPERFAMILY SSF51316 1 138 6.28E-36 T 11-10-2018 IPR011057 Mss4-like superfamily AMC99_01402 5c2c38d8232ab91b900688fdb317c59a 149 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 118 5.8E-19 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 AMC99_00116 acd620f65ee8460bc9fedaeeb6e8a0f1 156 Gene3D G3DSA:3.50.30.80 1 147 6.4E-25 T 11-10-2018 AMC99_00116 acd620f65ee8460bc9fedaeeb6e8a0f1 156 Pfam PF00920 Dehydratase family 1 143 7.5E-27 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 AMC99_00116 acd620f65ee8460bc9fedaeeb6e8a0f1 156 SUPERFAMILY SSF52016 2 144 2.12E-32 T 11-10-2018 AMC99_00505 8d6c08ecf6aa5f3a296687cbe999eafe 344 SUPERFAMILY SSF56112 13 307 1.11E-38 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMC99_00505 8d6c08ecf6aa5f3a296687cbe999eafe 344 Pfam PF01636 Phosphotransferase enzyme family 30 269 1.7E-31 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMC99_00505 8d6c08ecf6aa5f3a296687cbe999eafe 344 Gene3D G3DSA:3.90.1200.10 120 330 7.8E-37 T 11-10-2018 AMC99_00505 8d6c08ecf6aa5f3a296687cbe999eafe 344 Gene3D G3DSA:3.30.200.20 11 115 1.0E-7 T 11-10-2018 AMC99_00189 757640d1f84541b503cb030f46e32528 208 Pfam PF06055 Exopolysaccharide synthesis, ExoD 12 186 1.4E-46 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AMC99_00189 757640d1f84541b503cb030f46e32528 208 PIRSF PIRSF033239 1 199 8.9E-53 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AMC99_00088 efb0303296572c16f134193746c63b9d 206 Gene3D G3DSA:1.20.1510.10 20 203 1.9E-9 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMC99_00088 efb0303296572c16f134193746c63b9d 206 SUPERFAMILY SSF161111 18 203 7.72E-36 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AMC99_00088 efb0303296572c16f134193746c63b9d 206 Pfam PF01545 Cation efflux family 25 203 1.1E-11 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMC99_00284 eeb4a34de3260eabf8d41da763e80497 388 Pfam PF05552 Conserved TM helix 92 139 2.8E-11 T 11-10-2018 IPR008910 Conserved TM helix AMC99_00284 eeb4a34de3260eabf8d41da763e80497 388 Pfam PF05552 Conserved TM helix 187 234 7.6E-12 T 11-10-2018 IPR008910 Conserved TM helix AMC99_02187 b2e6aa37e52d5408089fefbc201e4075 704 Pfam PF00593 TonB dependent receptor 236 701 4.1E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_02187 b2e6aa37e52d5408089fefbc201e4075 704 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 11-10-2018 IPR010916 TonB box, conserved site AMC99_02187 b2e6aa37e52d5408089fefbc201e4075 704 Gene3D G3DSA:2.40.170.20 164 704 1.5E-55 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_02187 b2e6aa37e52d5408089fefbc201e4075 704 Gene3D G3DSA:2.170.130.10 22 155 1.5E-5 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_02187 b2e6aa37e52d5408089fefbc201e4075 704 SUPERFAMILY SSF56935 40 704 5.72E-69 T 11-10-2018 AMC99_01729 18644663f503b992a32da2a41811c3ab 336 SUPERFAMILY SSF53448 2 237 6.14E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_01729 18644663f503b992a32da2a41811c3ab 336 Pfam PF00535 Glycosyl transferase family 2 8 168 8.9E-26 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 AMC99_01729 18644663f503b992a32da2a41811c3ab 336 Gene3D G3DSA:3.90.550.10 2 236 4.7E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AMC99_00420 fcdeb2da75db533c6e8d11837c53f21c 360 Gene3D G3DSA:3.30.200.20 24 124 3.4E-34 T 11-10-2018 AMC99_00420 fcdeb2da75db533c6e8d11837c53f21c 360 SUPERFAMILY SSF56112 25 353 4.52E-60 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMC99_00420 fcdeb2da75db533c6e8d11837c53f21c 360 Gene3D G3DSA:3.90.1200.10 126 357 5.8E-86 T 11-10-2018 AMC99_00420 fcdeb2da75db533c6e8d11837c53f21c 360 Pfam PF01636 Phosphotransferase enzyme family 49 270 4.5E-49 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase AMC99_01758 2e37c46fcd5f6b409b69ebb2dab39d3d 364 Gene3D G3DSA:2.120.10.30 5 364 1.1E-85 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AMC99_01758 2e37c46fcd5f6b409b69ebb2dab39d3d 364 Pfam PF07995 Glucose / Sorbosone dehydrogenase 19 360 1.1E-106 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase AMC99_01758 2e37c46fcd5f6b409b69ebb2dab39d3d 364 SUPERFAMILY SSF50952 10 362 1.57E-28 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 AMC99_01544 87a102145cc0f19aeb77675c47d21168 102 Gene3D G3DSA:3.30.70.330 9 102 1.2E-31 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMC99_01544 87a102145cc0f19aeb77675c47d21168 102 SUPERFAMILY SSF54189 10 99 3.96E-31 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMC99_01544 87a102145cc0f19aeb77675c47d21168 102 ProSitePatterns PS00050 Ribosomal protein L23 signature. 84 99 - T 11-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AMC99_01544 87a102145cc0f19aeb77675c47d21168 102 Pfam PF00276 Ribosomal protein L23 13 98 2.7E-29 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMC99_01544 87a102145cc0f19aeb77675c47d21168 102 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 101 19.641 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMC99_01335 dcda4af68b3a5a3ca3db5f725dd1ff93 250 SUPERFAMILY SSF48317 37 228 6.67E-34 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMC99_01335 dcda4af68b3a5a3ca3db5f725dd1ff93 250 Gene3D G3DSA:1.20.144.10 134 241 4.1E-24 T 11-10-2018 AMC99_01335 dcda4af68b3a5a3ca3db5f725dd1ff93 250 Gene3D G3DSA:1.20.144.10 47 133 2.7E-8 T 11-10-2018 AMC99_01335 dcda4af68b3a5a3ca3db5f725dd1ff93 250 SMART SM00014 104 217 7.0E-21 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMC99_01335 dcda4af68b3a5a3ca3db5f725dd1ff93 250 Pfam PF01569 PAP2 superfamily 107 219 6.5E-22 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMC99_02477 5951f36bb08b44d0848b199e83ed5071 142 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 43.467 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AMC99_02477 5951f36bb08b44d0848b199e83ed5071 142 Gene3D G3DSA:3.40.140.10 1 137 3.7E-50 T 11-10-2018 AMC99_02477 5951f36bb08b44d0848b199e83ed5071 142 Pfam PF14437 MafB19-like deaminase 1 142 2.7E-27 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AMC99_02477 5951f36bb08b44d0848b199e83ed5071 142 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMC99_02477 5951f36bb08b44d0848b199e83ed5071 142 SUPERFAMILY SSF53927 1 142 3.54E-47 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AMC99_00491 712af62d285658bab4db893306c68766 382 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 76 91 - T 11-10-2018 IPR019826 Carboxylesterase type B, active site AMC99_00491 712af62d285658bab4db893306c68766 382 Gene3D G3DSA:3.40.50.1820 1 375 3.3E-80 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00491 712af62d285658bab4db893306c68766 382 Pfam PF00135 Carboxylesterase family 1 357 1.6E-54 T 11-10-2018 IPR002018 Carboxylesterase, type B AMC99_00491 712af62d285658bab4db893306c68766 382 SUPERFAMILY SSF53474 1 373 1.34E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_00563 09cbf0bc634040a579a73624d91fff83 192 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 6 191 3.4E-63 T 11-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AMC99_00563 09cbf0bc634040a579a73624d91fff83 192 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 192 25.079 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AMC99_00563 09cbf0bc634040a579a73624d91fff83 192 SUPERFAMILY SSF53271 5 166 4.4E-33 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AMC99_00563 09cbf0bc634040a579a73624d91fff83 192 Pfam PF00156 Phosphoribosyl transferase domain 47 175 2.7E-11 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMC99_00563 09cbf0bc634040a579a73624d91fff83 192 Gene3D G3DSA:3.40.50.2020 5 192 2.1E-48 T 11-10-2018 AMC99_02132 05d33ae1540fd8ccd8320e3ba902d144 179 Pfam PF02620 Uncharacterized ACR, COG1399 60 163 3.0E-9 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AMC99_01434 61a76f1cff09800fdedd8be85e195fec 1031 Pfam PF11739 Dicarboxylate transport 773 977 3.3E-40 T 11-10-2018 IPR021730 Dicarboxylate transport AMC99_02109 427ebf6dc838e7d1fb9edee8686f42a4 140 SUPERFAMILY SSF49503 3 95 3.0E-13 T 11-10-2018 IPR008972 Cupredoxin AMC99_02109 427ebf6dc838e7d1fb9edee8686f42a4 140 Gene3D G3DSA:2.60.40.420 1 79 4.2E-11 T 11-10-2018 IPR008972 Cupredoxin AMC99_00546 2a7dbddc65c60b92c17e223608c8f936 117 Pfam PF07237 Protein of unknown function (DUF1428) 1 101 5.1E-41 T 11-10-2018 IPR009874 Protein of unknown function DUF1428 AMC99_00546 2a7dbddc65c60b92c17e223608c8f936 117 PIRSF PIRSF007028 1 115 5.0E-44 T 11-10-2018 IPR009874 Protein of unknown function DUF1428 AMC99_00546 2a7dbddc65c60b92c17e223608c8f936 117 SUPERFAMILY SSF54909 1 114 1.8E-45 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel AMC99_00546 2a7dbddc65c60b92c17e223608c8f936 117 Gene3D G3DSA:3.30.70.100 1 115 9.2E-41 T 11-10-2018 AMC99_02757 b9cb4718c4d4695dc47329a538de4f79 141 Pfam PF02656 Domain of unknown function (DUF202) 31 94 9.3E-13 T 11-10-2018 IPR003807 Domain of unknown function DUF202 AMC99_02502 d6ae72e8f428af821e3baf5b56b98766 601 Pfam PF05960 Bacterial protein of unknown function (DUF885) 59 592 4.9E-164 T 11-10-2018 IPR010281 Protein of unknown function DUF885 AMC99_00436 09dad80f76e1c07f6c175b2a82c670a5 127 SUPERFAMILY SSF54197 9 122 1.55E-30 T 11-10-2018 IPR036265 HIT-like superfamily AMC99_00436 09dad80f76e1c07f6c175b2a82c670a5 127 Pfam PF01230 HIT domain 20 117 1.8E-24 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMC99_00436 09dad80f76e1c07f6c175b2a82c670a5 127 PRINTS PR00332 Histidine triad family signature 14 30 7.2E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMC99_00436 09dad80f76e1c07f6c175b2a82c670a5 127 PRINTS PR00332 Histidine triad family signature 35 53 7.2E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMC99_00436 09dad80f76e1c07f6c175b2a82c670a5 127 PRINTS PR00332 Histidine triad family signature 104 114 7.2E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AMC99_00436 09dad80f76e1c07f6c175b2a82c670a5 127 ProSitePatterns PS00892 HIT domain signature. 97 115 - T 11-10-2018 IPR019808 Histidine triad, conserved site AMC99_00436 09dad80f76e1c07f6c175b2a82c670a5 127 Gene3D G3DSA:3.30.428.10 4 120 1.1E-28 T 11-10-2018 IPR036265 HIT-like superfamily AMC99_02164 5654f3897d8ac513ee8a5ef58958485b 423 Pfam PF13657 HipA N-terminal domain 10 107 5.5E-21 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AMC99_02164 5654f3897d8ac513ee8a5ef58958485b 423 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 9 107 3.3E-22 T 11-10-2018 IPR017508 HipA, N-terminal subdomain 1 AMC99_02164 5654f3897d8ac513ee8a5ef58958485b 423 Pfam PF07804 HipA-like C-terminal domain 152 385 6.9E-51 T 11-10-2018 IPR012893 HipA-like, C-terminal AMC99_00718 a44bc2a1fb3fe98207181a01beba387c 461 SUPERFAMILY SSF103473 29 447 5.36E-22 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_00718 a44bc2a1fb3fe98207181a01beba387c 461 Pfam PF07690 Major Facilitator Superfamily 36 411 4.9E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_00718 a44bc2a1fb3fe98207181a01beba387c 461 Gene3D G3DSA:1.20.1250.20 25 443 8.3E-23 T 11-10-2018 AMC99_02135 3546e0b347c3f290a9308c05d448b2cd 83 SUPERFAMILY SSF50037 3 78 8.55E-10 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal AMC99_02135 3546e0b347c3f290a9308c05d448b2cd 83 Pfam PF04023 FeoA domain 1 77 2.1E-15 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMC99_02135 3546e0b347c3f290a9308c05d448b2cd 83 Gene3D G3DSA:2.30.30.90 1 81 1.3E-19 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain AMC99_02135 3546e0b347c3f290a9308c05d448b2cd 83 SMART SM00899 1 78 3.2E-16 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMC99_00594 ce954dfe5f51743f95ba78971cc5dd5e 418 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 332 1.7E-113 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 AMC99_00149 aa9b0aff4992347e3ccd0b45178638f7 98 PIRSF PIRSF021239 1 98 8.8E-37 T 11-10-2018 IPR007437 Protein of unknown function DUF486 AMC99_00149 aa9b0aff4992347e3ccd0b45178638f7 98 Pfam PF04342 Putative member of DMT superfamily (DUF486) 1 95 1.8E-36 T 11-10-2018 IPR007437 Protein of unknown function DUF486 AMC99_01431 699fcfb88e2e696f7399a099c4a2495e 108 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 54 98 1.5E-12 T 11-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter AMC99_01431 699fcfb88e2e696f7399a099c4a2495e 108 PIRSF PIRSF032126 1 104 3.8E-23 T 11-10-2018 IPR016989 ATP synthase protein I, alphaproteobacterial AMC99_00319 90be3626eaa30117220600ee3230bf3d 412 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 8 367 2.2E-69 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 AMC99_00319 90be3626eaa30117220600ee3230bf3d 412 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 367 3.6E-60 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AMC99_00068 47b1a7e410fd3b9301f966ab2c0539bf 250 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 114 234 1.9E-20 T 11-10-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup AMC99_00068 47b1a7e410fd3b9301f966ab2c0539bf 250 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 116 226 5.9E-29 T 11-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC AMC99_01428 0ffac10ac3cf374382ee39f8ca13d2d4 164 Hamap MF_01398 ATP synthase subunit b [atpF]. 9 146 10.155 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMC99_01428 0ffac10ac3cf374382ee39f8ca13d2d4 164 Pfam PF00430 ATP synthase B/B' CF(0) 16 143 2.8E-17 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMC99_01578 b9b96e90835a37c37e4c2b7a7e8b616d 424 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 18 63 4.5E-10 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal AMC99_01089 bf9918831aebcb2b6c1bef199ecbf95e 172 SUPERFAMILY SSF46785 85 162 4.72E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AMC99_01089 bf9918831aebcb2b6c1bef199ecbf95e 172 Gene3D G3DSA:1.10.10.10 19 168 1.7E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_01062 cfc1ac398b9860495239e0be5c70928d 256 Pfam PF01061 ABC-2 type transporter 10 219 2.1E-31 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 AMC99_01062 cfc1ac398b9860495239e0be5c70928d 256 PIRSF PIRSF006648 2 253 1.4E-31 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMC99_01062 cfc1ac398b9860495239e0be5c70928d 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.0E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMC99_01062 cfc1ac398b9860495239e0be5c70928d 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.0E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMC99_01062 cfc1ac398b9860495239e0be5c70928d 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 3.0E-7 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 AMC99_01242 ca2747bb111bcbb1a3d280ace92fec1b 90 Pfam PF07330 Protein of unknown function (DUF1467) 1 82 6.6E-28 T 11-10-2018 IPR009935 Protein of unknown function DUF1467 AMC99_01516 fc08f86a3c8f829e2dfcbf613adcf1d5 210 Pfam PF03458 UPF0126 domain 12 83 2.7E-18 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AMC99_01516 fc08f86a3c8f829e2dfcbf613adcf1d5 210 Pfam PF03458 UPF0126 domain 97 167 1.4E-15 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 AMC99_00070 3bea2e59aca29b3ac0f822ea64d57cfd 212 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 10 202 9.7E-63 T 11-10-2018 IPR014114 Type-F conjugative transfer system protein TraW AMC99_01887 17a9e76754b9b2ccc8787df7a093159e 278 Gene3D G3DSA:3.30.565.40 14 167 3.3E-6 T 11-10-2018 AMC99_01887 17a9e76754b9b2ccc8787df7a093159e 278 Pfam PF13739 Domain of unknown function (DUF4163) 79 151 1.1E-6 T 11-10-2018 IPR025303 Deacetylase PdaC AMC99_02548 9315ed1a61205248c7083714fcd5e431 232 Pfam PF01738 Dienelactone hydrolase family 16 229 4.2E-48 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 AMC99_02548 9315ed1a61205248c7083714fcd5e431 232 Gene3D G3DSA:3.40.50.1820 4 230 2.3E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02548 9315ed1a61205248c7083714fcd5e431 232 SUPERFAMILY SSF53474 12 231 9.93E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02053 5829a39178b0e229c5436831c308b01f 439 Pfam PF10011 Predicted membrane protein (DUF2254) 14 388 6.5E-111 T 11-10-2018 IPR018723 Protein of unknown function DUF2254, membrane AMC99_02676 b7ea016255d03accfd847f6c9b32d615 271 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 153 189 1.3E-5 T 11-10-2018 IPR018637 Domain of unknown function DUF2059 AMC99_01339 9b1bc43cf9f51ef7904760e1a1f3c558 145 Pfam PF00293 NUDIX domain 2 136 1.0E-26 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 AMC99_01339 9b1bc43cf9f51ef7904760e1a1f3c558 145 PRINTS PR00502 NUDIX hydrolase family signature 37 52 3.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMC99_01339 9b1bc43cf9f51ef7904760e1a1f3c558 145 PRINTS PR00502 NUDIX hydrolase family signature 23 37 3.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 AMC99_01339 9b1bc43cf9f51ef7904760e1a1f3c558 145 Gene3D G3DSA:3.90.79.10 1 145 3.8E-42 T 11-10-2018 AMC99_01339 9b1bc43cf9f51ef7904760e1a1f3c558 145 SUPERFAMILY SSF55811 6 143 1.76E-31 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 AMC99_01339 9b1bc43cf9f51ef7904760e1a1f3c558 145 ProSitePatterns PS00893 Nudix box signature. 28 49 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMC99_00884 8a5643a06056cf0058f7507a5fecc03c 156 Gene3D G3DSA:3.40.50.12740 2 153 2.6E-33 T 11-10-2018 AMC99_00884 8a5643a06056cf0058f7507a5fecc03c 156 SMART SM00448 2 115 1.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00884 8a5643a06056cf0058f7507a5fecc03c 156 Pfam PF00072 Response regulator receiver domain 4 115 1.8E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AMC99_00884 8a5643a06056cf0058f7507a5fecc03c 156 SUPERFAMILY SSF52172 1 136 1.57E-34 T 11-10-2018 IPR011006 CheY-like superfamily AMC99_01163 c11db4ea956ff9abf3aaee87975e81ac 175 Pfam PF02674 Colicin V production protein 4 150 1.4E-32 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AMC99_00782 014071fc3edf5d8140ab36071c57c829 234 Pfam PF00117 Glutamine amidotransferase class-I 50 111 8.8E-6 T 11-10-2018 IPR017926 Glutamine amidotransferase AMC99_00782 014071fc3edf5d8140ab36071c57c829 234 Gene3D G3DSA:3.40.50.880 1 224 5.6E-27 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_00782 014071fc3edf5d8140ab36071c57c829 234 SUPERFAMILY SSF52317 5 192 1.28E-18 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AMC99_02009 4ce4a1e7c757a761fe7fa34545b701e9 164 Pfam PF11026 Protein of unknown function (DUF2721) 33 152 6.1E-26 T 11-10-2018 IPR021279 Protein of unknown function DUF2721 AMC99_02765 f46194a343f66906dc4918a945821e54 233 Pfam PF02390 Putative methyltransferase 56 197 7.1E-35 T 11-10-2018 AMC99_02765 f46194a343f66906dc4918a945821e54 233 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 17 233 25.062 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 AMC99_02765 f46194a343f66906dc4918a945821e54 233 SUPERFAMILY SSF53335 55 231 1.77E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMC99_02765 f46194a343f66906dc4918a945821e54 233 Gene3D G3DSA:3.40.50.150 25 233 1.5E-45 T 11-10-2018 AMC99_02679 d685d4050840f89f8af18b8ff16d73fa 127 Pfam PF02472 Biopolymer transport protein ExbD/TolR 2 117 2.1E-16 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMC99_01195 7af0da8e8aa9174d3c7edf2d55e07dba 153 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.5E-31 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AMC99_01195 7af0da8e8aa9174d3c7edf2d55e07dba 153 Gene3D G3DSA:3.30.530.20 4 144 5.0E-40 T 11-10-2018 IPR023393 START-like domain superfamily AMC99_01195 7af0da8e8aa9174d3c7edf2d55e07dba 153 SUPERFAMILY SSF55961 1 143 1.43E-33 T 11-10-2018 AMC99_01144 40a574381a98917b2af9dad5e4af7568 116 Gene3D G3DSA:3.40.1350.10 12 116 2.5E-23 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AMC99_01144 40a574381a98917b2af9dad5e4af7568 116 SUPERFAMILY SSF52980 8 115 3.22E-18 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AMC99_01144 40a574381a98917b2af9dad5e4af7568 116 Pfam PF02021 Uncharacterised protein family UPF0102 14 100 1.2E-15 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AMC99_01908 fef34465ea6481b942203460c73f73ed 271 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 10 249 16.747 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_01908 fef34465ea6481b942203460c73f73ed 271 Pfam PF00902 Sec-independent protein translocase protein (TatC) 17 232 8.0E-68 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_01908 fef34465ea6481b942203460c73f73ed 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 92 110 5.2E-41 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_01908 fef34465ea6481b942203460c73f73ed 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 165 193 5.2E-41 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_01908 fef34465ea6481b942203460c73f73ed 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 14 41 5.2E-41 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_01908 fef34465ea6481b942203460c73f73ed 271 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 110 136 5.2E-41 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_01908 fef34465ea6481b942203460c73f73ed 271 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 15 237 3.7E-62 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMC99_00001 91b1d3b7bba434d044d4d44b00165648 41 Gene3D G3DSA:3.30.70.980 1 39 5.4E-10 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00001 91b1d3b7bba434d044d4d44b00165648 41 SUPERFAMILY SSF75625 2 39 1.7E-9 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AMC99_00385 3bbbfafe6c608cef3f5ab66cae0ff9e8 620 Pfam PF05960 Bacterial protein of unknown function (DUF885) 72 610 2.9E-155 T 11-10-2018 IPR010281 Protein of unknown function DUF885 AMC99_02153 1ad916186e3216eef56b627f39317f3c 528 Pfam PF03109 ABC1 family 110 216 6.8E-26 T 11-10-2018 IPR004147 UbiB domain AMC99_02153 1ad916186e3216eef56b627f39317f3c 528 SUPERFAMILY SSF56112 92 417 1.53E-23 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AMC99_01920 7ca1b4c2fab1680f79a7ad74ed867f4a 58 Gene3D G3DSA:3.30.160.160 2 48 6.3E-19 T 11-10-2018 AMC99_01920 7ca1b4c2fab1680f79a7ad74ed867f4a 58 Pfam PF07411 Domain of unknown function (DUF1508) 10 56 5.2E-18 T 11-10-2018 IPR010879 Domain of unknown function DUF1508 AMC99_01920 7ca1b4c2fab1680f79a7ad74ed867f4a 58 SUPERFAMILY SSF160113 1 56 7.85E-16 T 11-10-2018 IPR036913 YegP-like superfamily AMC99_00500 16968d2f679886de12443b10e2f9af52 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 1.3E-110 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMC99_00500 16968d2f679886de12443b10e2f9af52 427 PIRSF PIRSF006066 1 427 4.3E-150 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AMC99_00500 16968d2f679886de12443b10e2f9af52 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 1.7E-130 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 AMC99_00058 f0f83b669719cfbe1207ea9c8e9766d5 545 Gene3D G3DSA:1.10.10.10 122 188 4.1E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02543 3ff6ed1f316eac09b8bbdd641f478412 141 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 141 1.7E-41 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AMC99_02543 3ff6ed1f316eac09b8bbdd641f478412 141 PIRSF PIRSF004638 1 141 3.1E-51 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AMC99_02543 3ff6ed1f316eac09b8bbdd641f478412 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 8.3E-54 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AMC99_01850 b4a02e6dfe8aa177b155dfbd32e3648b 655 Gene3D G3DSA:2.170.130.10 48 170 7.1E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily AMC99_01850 b4a02e6dfe8aa177b155dfbd32e3648b 655 Gene3D G3DSA:2.40.170.20 175 655 8.3E-86 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMC99_01850 b4a02e6dfe8aa177b155dfbd32e3648b 655 SUPERFAMILY SSF56935 50 655 8.55E-99 T 11-10-2018 AMC99_01850 b4a02e6dfe8aa177b155dfbd32e3648b 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 165 1.9E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain AMC99_01850 b4a02e6dfe8aa177b155dfbd32e3648b 655 Pfam PF00593 TonB dependent receptor 198 653 5.9E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel AMC99_00742 e588729fdee63a4e4c164fda19f89459 316 Pfam PF04338 Protein of unknown function, DUF481 102 316 1.3E-57 T 11-10-2018 IPR007433 Protein of unknown function DUF481 AMC99_00742 e588729fdee63a4e4c164fda19f89459 316 SUPERFAMILY SSF103515 126 295 1.57E-6 T 11-10-2018 IPR036709 Autotransporter beta-domain superfamily AMC99_02136 2c5c99b62f046bff72f44c05e733dc03 223 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 30 200 2.7E-47 T 11-10-2018 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 Reactome: R-HSA-2142789 AMC99_02136 2c5c99b62f046bff72f44c05e733dc03 223 Pfam PF08511 COQ9 121 197 5.0E-29 T 11-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 AMC99_02136 2c5c99b62f046bff72f44c05e733dc03 223 Gene3D G3DSA:1.10.357.10 10 192 4.4E-38 T 11-10-2018 AMC99_00797 b835c8483d82141c430ea69145982b96 333 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 329 7.3E-46 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMC99_00797 b835c8483d82141c430ea69145982b96 333 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 323 6.4E-96 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 AMC99_01201 3c2501afe463187150ee1f268e0a94b0 280 SUPERFAMILY SSF51197 4 277 2.24E-73 T 11-10-2018 AMC99_01201 3c2501afe463187150ee1f268e0a94b0 280 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 12 274 2.8E-53 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 AMC99_01201 3c2501afe463187150ee1f268e0a94b0 280 Gene3D G3DSA:3.60.130.10 1 280 1.6E-73 T 11-10-2018 AMC99_02557 002598dfadb6d652672ba11bf2dfa267 920 Gene3D G3DSA:2.60.40.10 811 895 5.0E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold AMC99_02557 002598dfadb6d652672ba11bf2dfa267 920 SUPERFAMILY SSF49478 808 875 1.06E-7 T 11-10-2018 AMC99_02276 78f231e16f1f8e7fc8e630e47915273c 97 Pfam PF02325 YGGT family 14 90 1.1E-13 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AMC99_01926 492e1eaee0e29342cfc70cd4f55c22d2 212 Pfam PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 15 196 1.5E-40 T 11-10-2018 IPR019027 Pilus biogenesis CpaD-related AMC99_01701 fee9e36fcb0ed9362c748169b5fb8b94 133 Pfam PF03061 Thioesterase superfamily 21 102 3.1E-11 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 AMC99_01701 fee9e36fcb0ed9362c748169b5fb8b94 133 Gene3D G3DSA:3.10.129.10 4 130 8.0E-29 T 11-10-2018 AMC99_01701 fee9e36fcb0ed9362c748169b5fb8b94 133 SUPERFAMILY SSF54637 3 130 2.0E-34 T 11-10-2018 IPR029069 HotDog domain superfamily AMC99_01857 bf86f30526abac692879489a8f3ab0d0 577 Pfam PF05036 Sporulation related domain 491 563 3.4E-5 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMC99_01857 bf86f30526abac692879489a8f3ab0d0 577 Gene3D G3DSA:1.25.40.10 56 234 5.8E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01857 bf86f30526abac692879489a8f3ab0d0 577 SUPERFAMILY SSF48452 63 228 1.14E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AMC99_01771 254cb1f289f187d103cc146f45892c08 218 Pfam PF12146 Serine aminopeptidase, S33 46 134 4.9E-10 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AMC99_01771 254cb1f289f187d103cc146f45892c08 218 Gene3D G3DSA:3.40.50.1820 2 214 5.8E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_01771 254cb1f289f187d103cc146f45892c08 218 SUPERFAMILY SSF53474 4 208 4.22E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02585 016d89961767d9f199a7082b31febdd0 137 Pfam PF04519 Polymer-forming cytoskeletal 11 104 4.2E-24 T 11-10-2018 IPR007607 Bactofilin A/B AMC99_02174 11159fc4e3ca46f92b3ea7dc4046a251 511 Gene3D G3DSA:2.40.50.840 434 506 2.5E-9 T 11-10-2018 AMC99_02174 11159fc4e3ca46f92b3ea7dc4046a251 511 SUPERFAMILY SSF53901 296 407 2.63E-13 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AMC99_01739 85d6b857b914a735111a00d00e0117af 149 Pfam PF14108 Domain of unknown function (DUF4281) 6 134 4.4E-27 T 11-10-2018 IPR025461 ABA DEFICIENT 4-like AMC99_00042 3da43d27c0012132c97ab668a04643d1 309 Pfam PF08401 Domain of unknown function (DUF1738) 13 126 2.9E-34 T 11-10-2018 IPR013610 Domain of unknown function DUF1738 AMC99_00042 3da43d27c0012132c97ab668a04643d1 309 PIRSF PIRSF037112 1 303 3.4E-108 T 11-10-2018 IPR017113 Antirestriction, ArdC AMC99_02615 53fbd167703af1ff6072bb7472a9aa4f 464 Pfam PF04932 O-Antigen ligase 233 391 1.7E-10 T 11-10-2018 IPR007016 O-antigen ligase-related AMC99_00054 afdace46b83e309cf69c7ecc831ae124 545 SUPERFAMILY SSF55874 23 131 3.51E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_00054 afdace46b83e309cf69c7ecc831ae124 545 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 150 1.3E-23 T 11-10-2018 AMC99_00054 afdace46b83e309cf69c7ecc831ae124 545 Gene3D G3DSA:3.30.565.10 7 168 4.0E-11 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMC99_01478 58befb22dc02bccd58fdf1e0faaa0596 214 SUPERFAMILY SSF50800 3 212 2.93E-57 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily AMC99_01478 58befb22dc02bccd58fdf1e0faaa0596 214 Gene3D G3DSA:2.40.33.20 2 213 6.1E-60 T 11-10-2018 AMC99_01478 58befb22dc02bccd58fdf1e0faaa0596 214 Pfam PF03473 MOSC domain 48 161 3.1E-16 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 AMC99_00278 db5aeaf3fd3581e93529d7fc4cf6ea28 225 Pfam PF13645 L,D-transpeptidase catalytic domain 37 197 2.3E-39 T 11-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase AMC99_00708 77c6c7d1d968f194167def222702ab52 641 Pfam PF02705 K+ potassium transporter 28 563 4.9E-202 T 11-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 AMC99_00708 77c6c7d1d968f194167def222702ab52 641 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 19 641 33.312 T 11-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup AMC99_02710 a2628bff54a0db8a8891796aae0e9b45 109 Pfam PF06803 Protein of unknown function (DUF1232) 17 53 6.1E-13 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 AMC99_02603 f86f568f1af78233eb0bf8d2ae2e7915 347 Pfam PF14897 EpsG family 25 344 6.0E-40 T 11-10-2018 AMC99_01139 c09ea244e1611e2a53ee9046a6e9c826 154 Pfam PF07811 TadE-like protein 30 72 1.3E-7 T 11-10-2018 IPR012495 TadE-like AMC99_02297 fb25fcff50f5804087e2112ea22c94fe 201 Pfam PF14352 Domain of unknown function (DUF4402) 63 199 1.5E-16 T 11-10-2018 IPR025514 Protein of unknown function DUF4402 AMC99_02359 9f89f178d8292ad260467ff26badba62 409 Gene3D G3DSA:3.40.50.10540 5 396 2.7E-56 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_02359 9f89f178d8292ad260467ff26badba62 409 SUPERFAMILY SSF89796 3 402 9.03E-69 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily AMC99_02359 9f89f178d8292ad260467ff26badba62 409 Pfam PF02515 CoA-transferase family III 5 377 2.4E-51 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 AMC99_02359 9f89f178d8292ad260467ff26badba62 409 Gene3D G3DSA:3.30.1540.10 229 327 2.7E-56 T 11-10-2018 AMC99_00468 2d1b9f2fefadb35cfdff039bf21ef09c 392 Pfam PF04909 Amidohydrolase 84 375 2.0E-21 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AMC99_00468 2d1b9f2fefadb35cfdff039bf21ef09c 392 Gene3D G3DSA:3.20.20.140 7 379 1.3E-75 T 11-10-2018 AMC99_00468 2d1b9f2fefadb35cfdff039bf21ef09c 392 SUPERFAMILY SSF51556 11 375 2.61E-47 T 11-10-2018 IPR032466 Metal-dependent hydrolase AMC99_00044 4f64708f7ee0671131da201ddc869e4d 311 Pfam PF10686 Protein of unknown function (DUF2493) 182 255 5.3E-23 T 11-10-2018 IPR019627 Mycobacteriophage D29, Gp61 AMC99_00640 6e977d94aa398e310f8d8b89367138a4 328 Gene3D G3DSA:3.20.20.370 18 324 4.7E-13 T 11-10-2018 AMC99_00640 6e977d94aa398e310f8d8b89367138a4 328 SUPERFAMILY SSF88713 79 215 2.03E-7 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_02212 ff44a457886b438d2ee54843ec351b26 245 SUPERFAMILY SSF74653 141 236 4.05E-6 T 11-10-2018 AMC99_02212 ff44a457886b438d2ee54843ec351b26 245 Gene3D G3DSA:3.30.1150.10 153 241 6.6E-6 T 11-10-2018 AMC99_02484 587bccd6a5490be47f0d142508462c83 127 SUPERFAMILY SSF46626 1 119 1.68E-9 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_02484 587bccd6a5490be47f0d142508462c83 127 Gene3D G3DSA:1.10.760.10 2 127 6.5E-9 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AMC99_02753 5fcfe8b3cb373c4e59f3fe83b31cda21 76 Pfam PF04588 Hypoxia induced protein conserved region 14 69 1.1E-5 T 11-10-2018 IPR007667 Hypoxia induced protein, domain AMC99_01241 7a3e30a3ae6b4ce6c620e6e3b5d73b42 874 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 156 702 6.0E-6 T 11-10-2018 AMC99_00021 700342dd9077ceda9ea4fd316a4a6e03 159 Gene3D G3DSA:2.40.50.140 92 146 9.9E-10 T 11-10-2018 AMC99_00021 700342dd9077ceda9ea4fd316a4a6e03 159 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 146 1.3E-22 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain AMC99_01126 f30515a2eb3b310bd5d4a0e183f78a06 112 Gene3D G3DSA:2.40.10.220 8 105 2.8E-8 T 11-10-2018 AMC99_01126 f30515a2eb3b310bd5d4a0e183f78a06 112 Pfam PF07238 PilZ domain 13 89 1.2E-8 T 11-10-2018 IPR009875 PilZ domain GO:0035438 AMC99_01126 f30515a2eb3b310bd5d4a0e183f78a06 112 SUPERFAMILY SSF141371 9 105 1.37E-14 T 11-10-2018 AMC99_00768 f1c672968e53993761059a86a877c366 67 Pfam PF11127 Protein of unknown function (DUF2892) 1 66 5.5E-19 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 AMC99_02732 f0d69bc8e2af371aaaf3e4e010683774 283 Pfam PF04116 Fatty acid hydroxylase superfamily 84 232 9.6E-24 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 AMC99_02604 66e19813283c8883152e181a647d77d6 333 SUPERFAMILY SSF88713 32 316 8.34E-14 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMC99_01577 ef5cebe7dd70592c2a0c51c90ef57ace 202 Pfam PF01323 DSBA-like thioredoxin domain 9 198 1.2E-27 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMC99_01577 ef5cebe7dd70592c2a0c51c90ef57ace 202 PIRSF PIRSF006386 1 201 5.4E-51 T 11-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 AMC99_01577 ef5cebe7dd70592c2a0c51c90ef57ace 202 Gene3D G3DSA:3.40.30.10 6 201 7.1E-51 T 11-10-2018 AMC99_01577 ef5cebe7dd70592c2a0c51c90ef57ace 202 SUPERFAMILY SSF52833 5 200 4.23E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00670 debb1697bf23b63ecbade3c4ecd617b9 161 Pfam PF13826 Domain of unknown function (DUF4188) 16 135 1.3E-42 T 11-10-2018 IPR025444 Monooxygenase af470-like AMC99_00578 9ae9b6f1c40f8f70f7861d7eb5c9c41c 80 Pfam PF02597 ThiS family 5 80 1.2E-9 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AMC99_00578 9ae9b6f1c40f8f70f7861d7eb5c9c41c 80 Gene3D G3DSA:3.10.20.30 3 80 2.6E-12 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AMC99_00578 9ae9b6f1c40f8f70f7861d7eb5c9c41c 80 SUPERFAMILY SSF54285 3 80 5.42E-10 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMC99_00681 e90df5459c3adf7809b51c5de68f8d95 249 Pfam PF02666 Phosphatidylserine decarboxylase 60 235 5.4E-34 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AMC99_00681 e90df5459c3adf7809b51c5de68f8d95 249 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 20 239 37.629 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AMC99_00681 e90df5459c3adf7809b51c5de68f8d95 249 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 27 239 1.3E-63 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AMC99_00343 395f6a30ac085d1a53caed3b893f92bd 348 Gene3D G3DSA:3.90.226.40 1 347 2.0E-121 T 11-10-2018 AMC99_00343 395f6a30ac085d1a53caed3b893f92bd 348 Pfam PF16113 Enoyl-CoA hydratase/isomerase 13 336 3.9E-117 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 AMC99_00343 395f6a30ac085d1a53caed3b893f92bd 348 SUPERFAMILY SSF52096 3 320 2.7E-63 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AMC99_02205 8afe633d905b6f6a3551be77fc36e7f0 520 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 45 253 1.3E-28 T 11-10-2018 AMC99_02205 8afe633d905b6f6a3551be77fc36e7f0 520 Pfam PF04087 Domain of unknown function (DUF389) 85 219 8.7E-39 T 11-10-2018 IPR005240 Protein of unknown function DUF389 AMC99_00033 8eb29adc2905c1afd9b181aa3672eb6f 256 Pfam PF06114 IrrE N-terminal-like domain 19 139 1.3E-12 T 11-10-2018 IPR010359 IrrE N-terminal-like domain AMC99_02044 433f7a3ab1628daa907a82af46cf7d95 52 Pfam PF04325 Protein of unknown function (DUF465) 9 51 1.6E-12 T 11-10-2018 IPR007420 Protein of unknown function DUF465 AMC99_01484 47be4ca02306d1ab9d8336535feda620 210 Pfam PF08818 Domain of unknown function (DU1801) 90 198 3.4E-10 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 AMC99_01208 700a0f935801ccf3254cc4c6c8f3d929 156 Pfam PF07811 TadE-like protein 16 58 1.2E-10 T 11-10-2018 IPR012495 TadE-like AMC99_02451 542b6e6ba158716957ca26603dd13ac1 431 Pfam PF07690 Major Facilitator Superfamily 33 391 2.4E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMC99_02451 542b6e6ba158716957ca26603dd13ac1 431 SUPERFAMILY SSF103473 28 429 4.97E-38 T 11-10-2018 IPR036259 MFS transporter superfamily AMC99_02451 542b6e6ba158716957ca26603dd13ac1 431 Gene3D G3DSA:1.20.1250.20 245 430 1.5E-53 T 11-10-2018 AMC99_02451 542b6e6ba158716957ca26603dd13ac1 431 Gene3D G3DSA:1.20.1250.20 30 232 2.5E-44 T 11-10-2018 AMC99_02451 542b6e6ba158716957ca26603dd13ac1 431 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 109 421 5.2E-82 T 11-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 AMC99_00613 2e39174ddbb24778ac68f585fdaec1e1 447 Pfam PF00144 Beta-lactamase 140 419 1.0E-29 T 11-10-2018 IPR001466 Beta-lactamase-related AMC99_00613 2e39174ddbb24778ac68f585fdaec1e1 447 SUPERFAMILY SSF56601 63 444 9.81E-86 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AMC99_00613 2e39174ddbb24778ac68f585fdaec1e1 447 Gene3D G3DSA:3.40.710.10 133 421 1.2E-104 T 11-10-2018 AMC99_00613 2e39174ddbb24778ac68f585fdaec1e1 447 Gene3D G3DSA:1.20.58.710 184 290 1.2E-104 T 11-10-2018 AMC99_00193 74d5426620da389de6a62457a6646a5e 378 Pfam PF02687 FtsX-like permease family 285 373 2.3E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_00193 74d5426620da389de6a62457a6646a5e 378 Pfam PF12704 MacB-like periplasmic core domain 18 227 3.1E-6 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AMC99_02777 3c0aa392dc6566f006ee10d6d110a3d0 222 Pfam PF13763 Domain of unknown function (DUF4167) 5 78 5.1E-26 T 11-10-2018 IPR025430 Domain of unknown function DUF4167 AMC99_01656 155799d6caa5abe325c543277eb0f9dd 302 Pfam PF02517 CAAX protease self-immunity 128 221 2.4E-17 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 AMC99_00591 3a058e9d08986d4d28ce657aca174942 150 Pfam PF05433 Glycine zipper 2TM domain 102 142 1.8E-8 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 AMC99_01180 9f603bf8b23c00fbae80c2e0b1163349 318 Gene3D G3DSA:3.40.50.300 3 167 1.0E-42 T 11-10-2018 AMC99_01180 9f603bf8b23c00fbae80c2e0b1163349 318 SUPERFAMILY SSF52540 7 208 1.78E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_01180 9f603bf8b23c00fbae80c2e0b1163349 318 Pfam PF13177 DNA polymerase III, delta subunit 11 168 3.3E-37 T 11-10-2018 AMC99_02075 7e759bf27c1b27402c8c8936b13b3f7a 106 TIGRFAM TIGR04433 UrcA_uranyl: UrcA family protein 7 84 3.2E-9 T 11-10-2018 IPR030972 UrcA family protein AMC99_00689 d3ef4f218e0a7b4ab0634b30d2b6ed1a 245 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 200 226 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 AMC99_00689 d3ef4f218e0a7b4ab0634b30d2b6ed1a 245 Pfam PF01148 Cytidylyltransferase family 72 238 2.8E-43 T 11-10-2018 AMC99_01527 92e88c1cdd0d097667f5a49b257fc9b7 385 Pfam PF01757 Acyltransferase family 42 365 3.9E-20 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 AMC99_01345 73f669c29e54025c2a717975fc8cb9cb 289 Pfam PF04228 Putative neutral zinc metallopeptidase 12 284 4.4E-81 T 11-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative AMC99_01418 637ee25eb7bf991368ae7d98834d0e43 111 Pfam PF09538 Protein of unknown function (FYDLN_acid) 1 100 1.0E-26 T 11-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid AMC99_00597 2edf3ccbf807500f51ffc814deb8ea3c 262 Pfam PF09976 Tetratricopeptide repeat-like domain 44 212 2.1E-13 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 AMC99_00395 44ee918ba78a67de0313796d67068d34 318 SUPERFAMILY SSF52540 23 296 5.31E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00395 44ee918ba78a67de0313796d67068d34 318 Pfam PF00685 Sulfotransferase domain 33 291 7.8E-34 T 11-10-2018 IPR000863 Sulfotransferase domain GO:0008146 AMC99_00357 992a641ad2dcd118bea9964599955b44 53 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 2 47 2.5E-17 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component AMC99_01512 60be5b0beb8c2c49dc010b8dd634df3a 556 Pfam PF03571 Peptidase family M49 182 409 5.2E-11 T 11-10-2018 IPR039461 Peptidase family M49 AMC99_00169 72b49e1b6c1dada962c7bdf142180c0a 410 Pfam PF14907 Uncharacterised nucleotidyltransferase 38 286 2.5E-43 T 11-10-2018 IPR039498 Uncharacterised nucleotidyltransferase AMC99_00499 4449ac9a5b15a500062bd60b367d2b24 156 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 20 144 2.2E-25 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ AMC99_01123 a6634df0e74051a9c9668e2388bca5ab 310 Pfam PF14378 PAP2 superfamily 103 295 1.2E-23 T 11-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 AMC99_00826 e18f209a65ae607bd3d9ebe95c73875a 314 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 310 9.8E-79 T 11-10-2018 IPR007296 Domain of unknown function DUF403 AMC99_02167 001fef6ba18f141bb0b5edd61f5351d2 255 Gene3D G3DSA:3.40.30.10 13 81 1.2E-10 T 11-10-2018 AMC99_02167 001fef6ba18f141bb0b5edd61f5351d2 255 Pfam PF00462 Glutaredoxin 11 70 5.5E-7 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AMC99_02167 001fef6ba18f141bb0b5edd61f5351d2 255 SUPERFAMILY SSF52833 8 81 2.8E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AMC99_00898 2d7381e8f1a4ea81b76fa04deb8e23d6 92 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 14 67 6.1E-15 T 11-10-2018 AMC99_01109 2a20118e67383bd52cd64dfc07a7429a 310 Pfam PF01963 TraB family 49 307 8.6E-73 T 11-10-2018 IPR002816 Pheromone shutdown, TraB AMC99_02317 cc9089290e73bd309a8baae000446aad 330 SUPERFAMILY SSF53474 41 326 7.77E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AMC99_02317 cc9089290e73bd309a8baae000446aad 330 Pfam PF00756 Putative esterase 44 320 6.6E-22 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 AMC99_01698 0b64ffc8ee437178b5e1f319f90e49cb 135 Pfam PF02657 Fe-S metabolism associated domain 14 127 7.5E-34 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like AMC99_01698 0b64ffc8ee437178b5e1f319f90e49cb 135 SUPERFAMILY SSF82649 2 131 1.46E-35 T 11-10-2018 AMC99_01698 0b64ffc8ee437178b5e1f319f90e49cb 135 Gene3D G3DSA:3.90.1010.10 1 132 2.6E-36 T 11-10-2018 AMC99_02583 a6aabeacf06c1959a08c51daadaf4482 241 Pfam PF06242 Protein of unknown function (DUF1013) 36 171 4.5E-60 T 11-10-2018 IPR010421 Protein of unknown function DUF1013 AMC99_00318 2c285aaf89de6793f04937216f2a7f1f 367 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 11 364 5.1E-93 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 AMC99_00318 2c285aaf89de6793f04937216f2a7f1f 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 14 362 3.7E-60 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 AMC99_02274 5f466862cf2cccbbc25a24a6fa1d1e49 208 Gene3D G3DSA:3.10.450.50 16 125 8.6E-6 T 11-10-2018 AMC99_02130 b888b231b222708ad41ea79613700e57 162 Pfam PF04355 SmpA / OmlA family 40 114 3.1E-14 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 AMC99_01205 4cf40c3663efe75a4d370555811c0839 217 SUPERFAMILY SSF48576 13 99 9.93E-7 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AMC99_01627 d77edb2a0ee83ac5a567079731bd53e9 184 PIRSF PIRSF032064 7 180 1.6E-24 T 11-10-2018 IPR010593 Protein of unknown function DUF1159 AMC99_01627 d77edb2a0ee83ac5a567079731bd53e9 184 Pfam PF05258 Protein of unknown function (DUF721) 32 124 2.5E-14 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AMC99_00139 6a96bd28e6213641ed4c9ea0ea3a020d 144 Pfam PF07298 NnrU protein 1 141 5.0E-33 T 11-10-2018 IPR009915 NnrU domain AMC99_02168 53743a8b941fd149c034d7fc3aa13b95 92 Pfam PF02583 Metal-sensitive transcriptional repressor 7 88 1.1E-29 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 AMC99_02168 53743a8b941fd149c034d7fc3aa13b95 92 Gene3D G3DSA:1.20.58.1000 2 91 2.4E-31 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily AMC99_01252 f36687167c41975e3607c4b61bc0f4e7 351 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 16 344 24.057 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01252 f36687167c41975e3607c4b61bc0f4e7 351 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 225 238 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_01252 f36687167c41975e3607c4b61bc0f4e7 351 Pfam PF00146 NADH dehydrogenase 24 337 2.2E-120 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AMC99_02638 796dd965023d955ec5d776d2e0b1da13 291 Pfam PF07007 Lysozyme inhibitor LprI 179 266 3.9E-11 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal AMC99_02638 796dd965023d955ec5d776d2e0b1da13 291 Gene3D G3DSA:1.20.1270.180 170 278 2.3E-8 T 11-10-2018 AMC99_01225 df16e054d6f23f0f96c07ee5f1afd192 282 Pfam PF09992 Phosphodiester glycosidase 110 256 1.3E-16 T 11-10-2018 IPR018711 Phosphodiester glycosidase AMC99_00840 3250c5bfd17a2d461c75dc1bf9563398 843 Pfam PF02687 FtsX-like permease family 752 835 3.4E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_00840 3250c5bfd17a2d461c75dc1bf9563398 843 Pfam PF02687 FtsX-like permease family 290 379 6.9E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AMC99_00307 a062f444318f22f0625efb9463d2a555 390 Pfam PF01594 AI-2E family transporter 31 356 9.8E-34 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AMC99_01972 6963cb47e98a1b3500f536efd5aa04bc 370 Pfam PF02405 Permease MlaE 153 362 2.7E-74 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 AMC99_01972 6963cb47e98a1b3500f536efd5aa04bc 370 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 135 365 3.3E-71 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMC99_00895 e1cc9f6da5bc0262531bf50d94d9d9a7 257 SUPERFAMILY SSF56281 11 224 3.45E-6 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMC99_00090 b1d3627275a4eb6307f29bf017223398 248 Pfam PF03929 PepSY-associated TM region 17 242 1.7E-9 T 11-10-2018 IPR005625 PepSY-associated TM protein AMC99_00549 ded4dad0e85b266abfb7eea6dba17ddc 279 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 47 265 8.7E-48 T 11-10-2018 IPR018713 Domain of unknown function DUF2236 AMC99_01807 73c3813b4f233ef9ff63c346c6da7558 360 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 20 26 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AMC99_02114 798f33e91d3cea6910a974303aa03d48 198 Gene3D G3DSA:3.40.50.1010 2 157 3.8E-10 T 11-10-2018 AMC99_02114 798f33e91d3cea6910a974303aa03d48 198 Pfam PF01936 NYN domain 3 144 1.0E-9 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type AMC99_02202 4a2077c0e7623a29db63cc1d0379510c 166 Pfam PF02643 Uncharacterized ACR, COG1430 60 162 6.7E-30 T 11-10-2018 IPR003795 Protein of unknown function DUF192 AMC99_02202 4a2077c0e7623a29db63cc1d0379510c 166 Gene3D G3DSA:2.60.120.1140 27 162 1.3E-41 T 11-10-2018 IPR038695 Saro_0823-like superfamily AMC99_01983 2a33097dedfc26259506d27efe947791 283 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 66 263 1.4E-65 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AMC99_01983 2a33097dedfc26259506d27efe947791 283 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 70 283 1.2E-37 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 AMC99_02620 acfdd8b89c510db61a8075b3999aa8b9 322 PIRSF PIRSF035875 35 316 2.0E-63 T 11-10-2018 IPR017039 Virulence factor BrkB AMC99_02620 acfdd8b89c510db61a8075b3999aa8b9 322 Pfam PF03631 Virulence factor BrkB 55 308 1.7E-42 T 11-10-2018 IPR017039 Virulence factor BrkB AMC99_02193 25ba61f3597c08681d3a25b0396ab729 349 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 44 313 9.4E-18 T 11-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT AMC99_00823 354fb2e4181bd2629e3be212f9514bee 181 Pfam PF12276 Protein of unknown function (DUF3617) 8 181 1.3E-32 T 11-10-2018 IPR022061 Protein of unknown function DUF3617 AMC99_02751 a54c62e80fb148623d72acd446836b60 202 Gene3D G3DSA:3.30.40.60 87 178 5.2E-20 T 11-10-2018 AMC99_02751 a54c62e80fb148623d72acd446836b60 202 SMART SM00507 98 148 5.6E-11 T 11-10-2018 IPR003615 HNH nuclease AMC99_02751 a54c62e80fb148623d72acd446836b60 202 Pfam PF14279 HNH endonuclease 111 162 3.4E-15 T 11-10-2018 IPR029471 HNH endonuclease 5 AMC99_00586 246afaac3afec02534e5980b1185f97a 310 Pfam PF10118 Predicted metal-dependent hydrolase 42 290 2.7E-63 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AMC99_00586 246afaac3afec02534e5980b1185f97a 310 PIRSF PIRSF007580 25 308 2.7E-55 T 11-10-2018 IPR016516 Uncharacterised conserved protein UCP07580 AMC99_00095 4ca0fbfb0da9d2a5feb2b6612a6842e6 109 Pfam PF13801 Heavy-metal resistance 3 94 4.2E-10 T 11-10-2018 IPR025961 Heavy-metal resistance protein AMC99_00095 4ca0fbfb0da9d2a5feb2b6612a6842e6 109 Gene3D G3DSA:1.20.120.1490 1 107 1.4E-32 T 11-10-2018 AMC99_00162 041462685c7d1b9d2728e7689a5dd88c 442 Pfam PF04932 O-Antigen ligase 224 369 3.3E-12 T 11-10-2018 IPR007016 O-antigen ligase-related AMC99_02283 6dca71d7ad325beb68fcef6f7a068eba 129 Pfam PF03929 PepSY-associated TM region 2 112 1.3E-10 T 11-10-2018 IPR005625 PepSY-associated TM protein AMC99_02352 20c8dce74770705a582ac0a199754954 310 Gene3D G3DSA:2.160.20.10 29 303 2.1E-12 T 11-10-2018 IPR012334 Pectin lyase fold AMC99_02352 20c8dce74770705a582ac0a199754954 310 SUPERFAMILY SSF51126 33 299 8.32E-32 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor AMC99_01977 27f080b886cc563584711e4cae5d66c4 303 Pfam PF01925 Sulfite exporter TauE/SafE 18 286 1.3E-44 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMC99_00716 777d72988069bbf135a1c8f9e7e4dc0f 56 SUPERFAMILY SSF69047 6 48 3.4E-6 T 11-10-2018 IPR036629 YjbJ superfamily AMC99_01854 12f6dc31fcd7a614bfa58a9ed26abe4a 246 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 34 242 2.0E-61 T 11-10-2018 IPR006214 Bax inhibitor 1-related AMC99_00559 ee53e5625b4baea53dbb1d4b4a1d8dc3 352 Pfam PF01594 AI-2E family transporter 22 330 6.1E-39 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AMC99_01755 db7b65d902f061871ada0b4cd00aca0b 232 Gene3D G3DSA:3.40.50.300 1 207 1.2E-63 T 11-10-2018 AMC99_01755 db7b65d902f061871ada0b4cd00aca0b 232 SUPERFAMILY SSF52540 5 191 1.39E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00937 05d7fea6bb9c4eb75c64c34c78fdb5c9 59 Pfam PF04964 Flp/Fap pilin component 8 52 1.5E-18 T 11-10-2018 IPR007047 Flp/Fap pilin component AMC99_00065 c3ac45fe9b1d7e8ec50935d44ac72a7a 478 Pfam PF06122 Conjugative relaxosome accessory transposon protein 30 390 7.3E-112 T 11-10-2018 IPR010927 Type IV conjugative transfer system protein TraH AMC99_01914 7a6a44cfe205b56a9bec97be7d088c83 220 Pfam PF05036 Sporulation related domain 144 219 1.2E-6 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 AMC99_00836 cf15789f5fe41f388d860bbada802afa 211 Pfam PF07811 TadE-like protein 18 59 3.4E-6 T 11-10-2018 IPR012495 TadE-like AMC99_00571 a9da17c9dbf4d8dad1d21258ea7b8c5c 102 Pfam PF06170 Protein of unknown function (DUF983) 2 80 9.7E-26 T 11-10-2018 IPR009325 Protein of unknown function DUF983 AMC99_00064 7f3dcb4f5109fca3dd0a2a17801109d6 903 Pfam PF07916 TraG-like protein, N-terminal region 3 460 6.5E-124 T 11-10-2018 IPR012931 TraG-like, N-terminal AMC99_01366 ca497519855ebee422e3ca8eea483a65 57 Pfam PF04964 Flp/Fap pilin component 7 50 3.6E-15 T 11-10-2018 IPR007047 Flp/Fap pilin component AMC99_00781 9f640097ae504ca867049e38ac659577 126 Gene3D G3DSA:3.40.1260.10 1 124 1.3E-29 T 11-10-2018 IPR027396 DsrEFH-like AMC99_00781 9f640097ae504ca867049e38ac659577 126 SUPERFAMILY SSF75169 4 120 5.49E-13 T 11-10-2018 IPR027396 DsrEFH-like AMC99_00781 9f640097ae504ca867049e38ac659577 126 Pfam PF13686 DsrE/DsrF/DrsH-like family 56 118 1.7E-8 T 11-10-2018 IPR032836 DsrE2-like family AMC99_00208 313f0a3352911c65aeb3cc9a22c0845d 204 Pfam PF13590 Domain of unknown function (DUF4136) 55 192 6.1E-7 T 11-10-2018 IPR025411 Domain of unknown function DUF4136 AMC99_02509 95cf52360ff194944b84f27d9ee62a78 123 Pfam PF03203 MerC mercury resistance protein 13 120 8.8E-23 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 AMC99_01207 857a273b6d8cce7bfee92d6adc0f4776 151 Pfam PF07811 TadE-like protein 15 52 1.3E-6 T 11-10-2018 IPR012495 TadE-like AMC99_01699 80ce295b5fc8e75d451b26cf5478ebcf 115 Pfam PF04304 Protein of unknown function (DUF454) 2 111 3.1E-35 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AMC99_01699 80ce295b5fc8e75d451b26cf5478ebcf 115 PIRSF PIRSF016789 1 115 6.6E-31 T 11-10-2018 IPR007401 Protein of unknown function DUF454 AMC99_00775 49c0023c447c89827a33603336511631 312 Pfam PF02754 Cysteine-rich domain 12 96 1.6E-14 T 11-10-2018 IPR004017 Cysteine-rich domain AMC99_00775 49c0023c447c89827a33603336511631 312 Pfam PF02754 Cysteine-rich domain 160 255 6.3E-11 T 11-10-2018 IPR004017 Cysteine-rich domain AMC99_00288 65015d09e9191775122e2dd39b8b335d 305 Pfam PF06271 RDD family 30 193 5.0E-17 T 11-10-2018 IPR010432 RDD AMC99_02464 f2110827e61fe22c3ae175f8e20474ff 148 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 30 137 3.6E-33 T 11-10-2018 IPR018673 Protein of unknown function DUF2141 AMC99_01014 8d1880a29128b581657c17e439046272 515 SUPERFAMILY SSF56672 9 219 2.82E-32 T 11-10-2018 AMC99_02203 6b0004709e4a6c775d7fc987eac48507 177 Pfam PF02631 RecX family 46 159 2.4E-18 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 AMC99_02203 6b0004709e4a6c775d7fc987eac48507 177 Gene3D G3DSA:1.10.10.10 64 104 8.5E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AMC99_02391 faee37f2c06db943b1bdb1d6e42d979f 150 Pfam PF12100 Domain of unknown function (DUF3576) 45 144 6.0E-41 T 11-10-2018 IPR021959 Protein of unknown function DUF3576 AMC99_00072 27511c4dcce3237289a1467304799f68 108 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 1 102 5.9E-33 T 11-10-2018 IPR014115 Type-F conjugative transfer system protein TrbI AMC99_01216 5933cdafda4bbccd704b74be0845fc88 157 Pfam PF06676 Protein of unknown function (DUF1178) 1 149 1.1E-50 T 11-10-2018 IPR009562 Protein of unknown function DUF1178 AMC99_01216 5933cdafda4bbccd704b74be0845fc88 157 PIRSF PIRSF032131 1 156 1.1E-44 T 11-10-2018 IPR009562 Protein of unknown function DUF1178 AMC99_00736 711c1b2d5192db44041a46d4f666f000 226 Pfam PF02163 Peptidase family M50 134 168 1.7E-8 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AMC99_02738 f6dfaa6ee7303c1077e450a28d051c54 99 Pfam PF12096 Protein of unknown function (DUF3572) 19 98 2.5E-25 T 11-10-2018 IPR021955 Protein of unknown function DUF3572 AMC99_02605 c058df8b9f85d567949ca43c5058c8c0 403 SUPERFAMILY SSF56059 119 318 2.29E-22 T 11-10-2018 AMC99_02605 c058df8b9f85d567949ca43c5058c8c0 403 Gene3D G3DSA:3.30.470.20 115 355 1.8E-11 T 11-10-2018 AMC99_02407 a29f722388230b67ad1cf7d269e970f8 242 Pfam PF01925 Sulfite exporter TauE/SafE 11 235 8.2E-21 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 AMC99_02387 dca72c87fbb7a24f9e63e15c0a575645 467 Pfam PF02397 Bacterial sugar transferase 274 460 9.5E-60 T 11-10-2018 IPR003362 Bacterial sugar transferase AMC99_02394 8d77c26c18e4228a345432a8da83ce7d 85 Gene3D G3DSA:1.10.3990.20 4 85 1.0E-13 T 11-10-2018 IPR038268 Ribbon-helix-helix domain superfamily AMC99_02394 8d77c26c18e4228a345432a8da83ce7d 85 Pfam PF13467 Ribbon-helix-helix domain 9 73 7.1E-22 T 11-10-2018 IPR027373 Ribbon-helix-helix domain AMC99_02681 0958c6662f20f00e27b08f9621c5ab57 176 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 169 1.0E-15 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AMC99_00978 758368e5d04d771b734d551fbdfa4b23 71 Pfam PF11003 Protein of unknown function (DUF2842) 8 67 3.2E-14 T 11-10-2018 IPR021265 Protein of unknown function DUF2842 AMC99_01067 54598b47c0c178bce9ff406b5b7deaa3 345 SUPERFAMILY SSF52540 75 298 1.01E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMC99_00069 526559a72924a6fb2a60c2ba9abca0b2 328 Pfam PF06834 TraU protein 25 327 2.8E-109 T 11-10-2018 IPR009649 TraU AMC99_00171 bcdd100535ac254fda554423ed873244 482 Pfam PF13440 Polysaccharide biosynthesis protein 32 327 1.3E-16 T 11-10-2018 AMC99_01856 be957e86828650f76ef3323738747522 190 Pfam PF10722 Putative bacterial sensory transduction regulator 38 167 8.1E-29 T 11-10-2018 IPR019660 Putative sensory transduction regulator YbjN AMC99_00758 38cd0bb43af8739e6327c775af6aed3b 67 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 4.2E-12 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 AMC99_00732 2e34ec0a048d884f45d08c80adac2c40 159 Pfam PF13645 L,D-transpeptidase catalytic domain 13 157 4.5E-43 T 11-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase AMC99_00244 0e7b087c9130e97c6be43226b7aa07fb 132 Pfam PF14248 Domain of unknown function (DUF4345) 4 116 4.3E-7 T 11-10-2018 IPR025597 Protein of unknown function DUF4345 AMC99_01271 f5fc2e868ad7d7344aaeb5950071b2e3 467 Gene3D G3DSA:3.20.20.70 15 466 5.6E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AMC99_01271 f5fc2e868ad7d7344aaeb5950071b2e3 467 SUPERFAMILY SSF51412 28 311 2.7E-6 T 11-10-2018 AMC99_02014 abfbf079840dd59ab122ba0c98c1bdfe 170 SUPERFAMILY SSF47598 104 154 1.06E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 AMC99_02786 10ebabf4d7806d3d03d3f1ca32a299e0 363 Pfam PF00924 Mechanosensitive ion channel 148 341 1.3E-29 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMC99_02786 10ebabf4d7806d3d03d3f1ca32a299e0 363 SUPERFAMILY SSF50182 191 255 1.01E-13 T 11-10-2018 IPR010920 LSM domain superfamily AMC99_02786 10ebabf4d7806d3d03d3f1ca32a299e0 363 Gene3D G3DSA:2.30.30.60 205 254 1.7E-7 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMC99_00876 dc18916fa75bd1e3cf2ade4679d9033b 119 Pfam PF10984 Protein of unknown function (DUF2794) 24 108 5.7E-37 T 11-10-2018 IPR021252 Protein of unknown function DUF2794 AMC99_02634 0ca5587337bd8e85818ac1d4cf72502f 430 Pfam PF04286 Protein of unknown function (DUF445) 59 426 1.9E-100 T 11-10-2018 IPR007383 Protein of unknown function DUF445 AMC99_00971 3fff8f8e1d3f95560059e4dccdb783c1 40 Pfam PF08085 Entericidin EcnA/B family 20 37 2.1E-5 T 11-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 AMC99_00078 cad1a5f8bc2dcb2b71493ca88115f64e 271 Pfam PF06586 TraK protein 37 262 1.2E-50 T 11-10-2018 IPR010563 Pilus assembly TraK AMC99_02112 1dc110a4b8b415e898d5a0db465f4157 237 SUPERFAMILY SSF102405 17 192 1.56E-5 T 11-10-2018 AMC99_01097 847d045d650acd99e35521a68de90a23 185 Pfam PF04093 rod shape-determining protein MreD 31 166 2.0E-5 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 AMC99_00839 565afd8d48bfe12b0160fdf944082be2 151 Pfam PF05656 Protein of unknown function (DUF805) 11 141 5.7E-31 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 AMC99_02556 1bb7f30915107639fac73acf89487bc8 279 SUPERFAMILY SSF49354 30 172 2.59E-7 T 11-10-2018 IPR008962 PapD-like superfamily AMC99_01866 00a740bc98c5a8f26f0c0865d708f75d 408 Pfam PF01098 Cell cycle protein 42 387 9.6E-62 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AMC99_01580 9a35f37cc18fbc40c818f0be262c0029 131 Pfam PF07811 TadE-like protein 12 54 2.1E-10 T 11-10-2018 IPR012495 TadE-like AMC99_00830 3d514ef63e6cc1dcfcbb109bb44a8c5c 226 Pfam PF06904 Extensin-like protein C-terminus 51 226 9.8E-56 T 11-10-2018 IPR009683 Extensin-like, C-terminal AMC99_01146 de258d0765b482179185300a7a920b9d 203 Pfam PF09335 SNARE associated Golgi protein 30 159 1.2E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein AMC99_01019 86e44b967a7d3460f3a75ad1b6cba353 243 Pfam PF06904 Extensin-like protein C-terminus 73 242 1.7E-51 T 11-10-2018 IPR009683 Extensin-like, C-terminal AMC99_00849 f6020b5019365ab6cec79cb173d928a9 225 Gene3D G3DSA:3.10.310.50 109 224 7.0E-30 T 11-10-2018